BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005210
(709 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 226 bits (577), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 137/311 (44%), Positives = 187/311 (60%), Gaps = 24/311 (7%)
Query: 132 FEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMA-REIHILRRLDHIN 190
+EKL KIGQGT+ V++AR + VALKKV +N E E A REI IL+ L H N
Sbjct: 20 YEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMEN-EKEGFPITALREIKILQLLKHEN 78
Query: 191 VIKLEGLVTSRMS----C--SLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGL 244
V+ L + ++ S C S+YLVF++ EHDLAGL S+ +KF+ +++K MQ LL GL
Sbjct: 79 VVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGL 138
Query: 245 DHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQN-QP--LTSRVVTLWYRPP 301
+ H +LHRD+K +N+LI +G+LK+ADFGLA + +N QP +RVVTLWYRPP
Sbjct: 139 YYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPP 198
Query: 302 ELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSK 361
ELLLG YG +DLW GCI+AE++ PIM G TE QL I +LCGS + + W
Sbjct: 199 ELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVW---- 254
Query: 362 LPHATIFKPQQPY------KRCVAETFKDFPAP--ALALMETLLSIDPADRGSAASALRS 413
P+ ++ + KR V + K + AL L++ LL +DPA R + AL
Sbjct: 255 -PNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH 313
Query: 414 EFFTMKPLPCD 424
+FF P+P D
Sbjct: 314 DFFWSDPMPSD 324
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 225 bits (574), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 136/311 (43%), Positives = 186/311 (59%), Gaps = 24/311 (7%)
Query: 132 FEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMA-REIHILRRLDHIN 190
+EKL KIGQGT+ V++AR + VALKKV +N E E A REI IL+ L H N
Sbjct: 20 YEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMEN-EKEGFPITALREIKILQLLKHEN 78
Query: 191 VIKLEGLVTSRMS------CSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGL 244
V+ L + ++ S S+YLVF++ EHDLAGL S+ +KF+ +++K MQ LL GL
Sbjct: 79 VVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGL 138
Query: 245 DHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQN-QP--LTSRVVTLWYRPP 301
+ H +LHRD+K +N+LI +G+LK+ADFGLA + +N QP +RVVTLWYRPP
Sbjct: 139 YYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPP 198
Query: 302 ELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSK 361
ELLLG YG +DLW GCI+AE++ PIM G TE QL I +LCGS + + W
Sbjct: 199 ELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVW---- 254
Query: 362 LPHATIFKPQQPY------KRCVAETFKDFPAP--ALALMETLLSIDPADRGSAASALRS 413
P+ ++ + KR V + K + AL L++ LL +DPA R + AL
Sbjct: 255 -PNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH 313
Query: 414 EFFTMKPLPCD 424
+FF P+P D
Sbjct: 314 DFFWSDPMPSD 324
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 225 bits (573), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 137/311 (44%), Positives = 187/311 (60%), Gaps = 24/311 (7%)
Query: 132 FEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMA-REIHILRRLDHIN 190
+EKL KIGQGT+ V++AR + VALKKV +N E E A REI IL+ L H N
Sbjct: 19 YEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMEN-EKEGFPITALREIKILQLLKHEN 77
Query: 191 VIKLEGLVTSRMS----C--SLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGL 244
V+ L + ++ S C S+YLVF++ EHDLAGL S+ +KF+ +++K MQ LL GL
Sbjct: 78 VVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGL 137
Query: 245 DHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQN-QP--LTSRVVTLWYRPP 301
+ H +LHRD+K +N+LI +G+LK+ADFGLA + +N QP +RVVTLWYRPP
Sbjct: 138 YYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPP 197
Query: 302 ELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSK 361
ELLLG YG +DLW GCI+AE++ PIM G TE QL I +LCGS + + W
Sbjct: 198 ELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVW---- 253
Query: 362 LPHATIFKPQQPY------KRCVAETFKDFPAP--ALALMETLLSIDPADRGSAASALRS 413
P+ ++ + KR V + K + AL L++ LL +DPA R + AL
Sbjct: 254 -PNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH 312
Query: 414 EFFTMKPLPCD 424
+FF P+P D
Sbjct: 313 DFFWSDPMPSD 323
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 225 bits (573), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 137/311 (44%), Positives = 187/311 (60%), Gaps = 24/311 (7%)
Query: 132 FEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMA-REIHILRRLDHIN 190
+EKL KIGQGT+ V++AR + VALKKV +N E E A REI IL+ L H N
Sbjct: 20 YEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMEN-EKEGFPITALREIKILQLLKHEN 78
Query: 191 VIKLEGLVTSRMS----C--SLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGL 244
V+ L + ++ S C S+YLVF++ EHDLAGL S+ +KF+ +++K MQ LL GL
Sbjct: 79 VVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGL 138
Query: 245 DHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQN-QP--LTSRVVTLWYRPP 301
+ H +LHRD+K +N+LI +G+LK+ADFGLA + +N QP +RVVTLWYRPP
Sbjct: 139 YYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPP 198
Query: 302 ELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSK 361
ELLLG YG +DLW GCI+AE++ PIM G TE QL I +LCGS + + W
Sbjct: 199 ELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVW---- 254
Query: 362 LPHATIFKPQQPY------KRCVAETFKDFPAP--ALALMETLLSIDPADRGSAASALRS 413
P+ ++ + KR V + K + AL L++ LL +DPA R + AL
Sbjct: 255 -PNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH 313
Query: 414 EFFTMKPLPCD 424
+FF P+P D
Sbjct: 314 DFFWSDPMPSD 324
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 214 bits (546), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 123/313 (39%), Positives = 179/313 (57%), Gaps = 15/313 (4%)
Query: 125 VPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPES---VRFMAREIH 181
V RA +EKLD +G+G ++ VY+ARD + +IVA+KK++ + R REI
Sbjct: 5 VKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIK 64
Query: 182 ILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLL 241
+L+ L H N+I L + + SL VF++ME DL + L + + +K YM L
Sbjct: 65 LLQELSHPNIIGLLDAFGHKSNISL--VFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTL 122
Query: 242 CGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLA-SFYDPDQNQPLTSRVVTLWYRP 300
GL++ H +LHRD+K +NLL+D NG+LK+ADFGLA SF P N+ +VVT WYR
Sbjct: 123 QGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSP--NRAYXHQVVTRWYRA 180
Query: 301 PELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYW-RK 359
PELL GA YG VD+W+ GCILAEL P +PG ++++QL +IF+ G+P+E+ W
Sbjct: 181 PELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDM 240
Query: 360 SKLPHATIFK--PQQPYKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALRSEFFT 417
LP FK P P + D L L++ L +P R +A AL+ ++F+
Sbjct: 241 CSLPDYVTFKSFPGIPLHHIFSAAGDDL----LDLIQGLFLFNPCARITATQALKMKYFS 296
Query: 418 MKPLPCDPSSLPK 430
+P P LP+
Sbjct: 297 NRPGPTPGCQLPR 309
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 213 bits (543), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 129/307 (42%), Positives = 179/307 (58%), Gaps = 20/307 (6%)
Query: 126 PRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMA-REIHILR 184
P ++F+K++KIG+GTY VY+AR+ ++VALKK+R D E E V A REI +L+
Sbjct: 6 PEFMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLK 64
Query: 185 RLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLK-FSEAQVKCYMQQLLCG 243
L+H N++KL ++ + LYLVFE++ DL L +K Y+ QLL G
Sbjct: 65 ELNHPNIVKLLDVIHTE--NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQG 122
Query: 244 LDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLA-SFYDPDQNQPLTSRVVTLWYRPPE 302
L CHS VLHRD+K NLLI+ G +K+ADFGLA +F P + T VVTLWYR PE
Sbjct: 123 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAPE 180
Query: 303 LLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWR-KSK 361
+LLG YY TAVD+WS GCI AE+ + + PG +E++QL +IF+ G+P E W +
Sbjct: 181 ILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS 240
Query: 362 LPHATIFKPQQPYKRCVAETFKDFPAP----ALALMETLLSIDPADRGSAASALRSEFF- 416
+P +KP P + + F P +L+ +L DP R SA +AL FF
Sbjct: 241 MPD---YKPSFP--KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 295
Query: 417 -TMKPLP 422
KP+P
Sbjct: 296 DVTKPVP 302
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 213 bits (541), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 129/307 (42%), Positives = 179/307 (58%), Gaps = 20/307 (6%)
Query: 126 PRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMA-REIHILR 184
P ++F+K++KIG+GTY VY+AR+ ++VALKK+R D E E V A REI +L+
Sbjct: 6 PEFMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLK 64
Query: 185 RLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLK-FSEAQVKCYMQQLLCG 243
L+H N++KL ++ + LYLVFE++ DL L +K Y+ QLL G
Sbjct: 65 ELNHPNIVKLLDVIHTE--NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQG 122
Query: 244 LDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLA-SFYDPDQNQPLTSRVVTLWYRPPE 302
L CHS VLHRD+K NLLI+ G +K+ADFGLA +F P + T VVTLWYR PE
Sbjct: 123 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAPE 180
Query: 303 LLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWR-KSK 361
+LLG YY TAVD+WS GCI AE+ + + PG +E++QL +IF+ G+P E W +
Sbjct: 181 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS 240
Query: 362 LPHATIFKPQQPYKRCVAETFKDFPAP----ALALMETLLSIDPADRGSAASALRSEFF- 416
+P +KP P + + F P +L+ +L DP R SA +AL FF
Sbjct: 241 MPD---YKPSFP--KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 295
Query: 417 -TMKPLP 422
KP+P
Sbjct: 296 DVTKPVP 302
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 211 bits (538), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 128/303 (42%), Positives = 178/303 (58%), Gaps = 20/303 (6%)
Query: 130 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMA-REIHILRRLDH 188
++F+K++KIG+GTY VY+AR+ ++VALKK+R D E E V A REI +L+ L+H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELNH 61
Query: 189 INVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLK-FSEAQVKCYMQQLLCGLDHC 247
N++KL ++ + LYLVFE++ DL L +K Y+ QLL GL C
Sbjct: 62 PNIVKLLDVIHTE--NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFC 119
Query: 248 HSRGVLHRDIKGSNLLIDNNGILKIADFGLA-SFYDPDQNQPLTSRVVTLWYRPPELLLG 306
HS VLHRD+K NLLI+ G +K+ADFGLA +F P + T VVTLWYR PE+LLG
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAPEILLG 177
Query: 307 ATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYW-RKSKLPHA 365
YY TAVD+WS GCI AE+ + + PG +E++QL +IF+ G+P E W + +P
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD- 236
Query: 366 TIFKPQQPYKRCVAETFKDFPAP----ALALMETLLSIDPADRGSAASALRSEFF--TMK 419
+KP P + + F P +L+ +L DP R SA +AL FF K
Sbjct: 237 --YKPSFP--KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 292
Query: 420 PLP 422
P+P
Sbjct: 293 PVP 295
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 211 bits (538), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 128/303 (42%), Positives = 178/303 (58%), Gaps = 20/303 (6%)
Query: 130 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMA-REIHILRRLDH 188
++F+K++KIG+GTY VY+AR+ ++VALKK+R D E E V A REI +L+ L+H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELNH 62
Query: 189 INVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLK-FSEAQVKCYMQQLLCGLDHC 247
N++KL ++ + LYLVFE++ DL L +K Y+ QLL GL C
Sbjct: 63 PNIVKLLDVIHTE--NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 248 HSRGVLHRDIKGSNLLIDNNGILKIADFGLA-SFYDPDQNQPLTSRVVTLWYRPPELLLG 306
HS VLHRD+K NLLI+ G +K+ADFGLA +F P + T VVTLWYR PE+LLG
Sbjct: 121 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAPEILLG 178
Query: 307 ATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYW-RKSKLPHA 365
YY TAVD+WS GCI AE+ + + PG +E++QL +IF+ G+P E W + +P
Sbjct: 179 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD- 237
Query: 366 TIFKPQQPYKRCVAETFKDFPAP----ALALMETLLSIDPADRGSAASALRSEFF--TMK 419
+KP P + + F P +L+ +L DP R SA +AL FF K
Sbjct: 238 --YKPSFP--KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 293
Query: 420 PLP 422
P+P
Sbjct: 294 PVP 296
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 211 bits (538), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 128/303 (42%), Positives = 178/303 (58%), Gaps = 20/303 (6%)
Query: 130 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMA-REIHILRRLDH 188
++F+K++KIG+GTY VY+AR+ ++VALKK+R D E E V A REI +L+ L+H
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELNH 65
Query: 189 INVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLK-FSEAQVKCYMQQLLCGLDHC 247
N++KL ++ + LYLVFE++ DL L +K Y+ QLL GL C
Sbjct: 66 PNIVKLLDVIHT--ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 123
Query: 248 HSRGVLHRDIKGSNLLIDNNGILKIADFGLA-SFYDPDQNQPLTSRVVTLWYRPPELLLG 306
HS VLHRD+K NLLI+ G +K+ADFGLA +F P + T VVTLWYR PE+LLG
Sbjct: 124 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAPEILLG 181
Query: 307 ATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWR-KSKLPHA 365
YY TAVD+WS GCI AE+ + + PG +E++QL +IF+ G+P E W + +P
Sbjct: 182 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD- 240
Query: 366 TIFKPQQPYKRCVAETFKDFPAP----ALALMETLLSIDPADRGSAASALRSEFF--TMK 419
+KP P + + F P +L+ +L DP R SA +AL FF K
Sbjct: 241 --YKPSFP--KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 296
Query: 420 PLP 422
P+P
Sbjct: 297 PVP 299
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 211 bits (538), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 128/303 (42%), Positives = 178/303 (58%), Gaps = 20/303 (6%)
Query: 130 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMA-REIHILRRLDH 188
++F+K++KIG+GTY VY+AR+ ++VALKK+R D E E V A REI +L+ L+H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELNH 61
Query: 189 INVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLK-FSEAQVKCYMQQLLCGLDHC 247
N++KL ++ + LYLVFE++ DL L +K Y+ QLL GL C
Sbjct: 62 PNIVKLLDVIHT--ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 248 HSRGVLHRDIKGSNLLIDNNGILKIADFGLA-SFYDPDQNQPLTSRVVTLWYRPPELLLG 306
HS VLHRD+K NLLI+ G +K+ADFGLA +F P + T VVTLWYR PE+LLG
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAPEILLG 177
Query: 307 ATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYW-RKSKLPHA 365
YY TAVD+WS GCI AE+ + + PG +E++QL +IF+ G+P E W + +P
Sbjct: 178 XKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD- 236
Query: 366 TIFKPQQPYKRCVAETFKDFPAP----ALALMETLLSIDPADRGSAASALRSEFF--TMK 419
+KP P + + F P +L+ +L DP R SA +AL FF K
Sbjct: 237 --YKPSFP--KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 292
Query: 420 PLP 422
P+P
Sbjct: 293 PVP 295
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 211 bits (538), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 128/303 (42%), Positives = 178/303 (58%), Gaps = 20/303 (6%)
Query: 130 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMA-REIHILRRLDH 188
++F+K++KIG+GTY VY+AR+ ++VALKK+R D E E V A REI +L+ L+H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELNH 60
Query: 189 INVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLK-FSEAQVKCYMQQLLCGLDHC 247
N++KL ++ + LYLVFE++ DL L +K Y+ QLL GL C
Sbjct: 61 PNIVKLLDVIHT--ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 248 HSRGVLHRDIKGSNLLIDNNGILKIADFGLA-SFYDPDQNQPLTSRVVTLWYRPPELLLG 306
HS VLHRD+K NLLI+ G +K+ADFGLA +F P + T VVTLWYR PE+LLG
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAPEILLG 176
Query: 307 ATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWR-KSKLPHA 365
YY TAVD+WS GCI AE+ + + PG +E++QL +IF+ G+P E W + +P
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD- 235
Query: 366 TIFKPQQPYKRCVAETFKDFPAP----ALALMETLLSIDPADRGSAASALRSEFF--TMK 419
+KP P + + F P +L+ +L DP R SA +AL FF K
Sbjct: 236 --YKPSFP--KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 291
Query: 420 PLP 422
P+P
Sbjct: 292 PVP 294
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 211 bits (537), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 128/303 (42%), Positives = 178/303 (58%), Gaps = 20/303 (6%)
Query: 130 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMA-REIHILRRLDH 188
++F+K++KIG+GTY VY+AR+ ++VALKK+R D E E V A REI +L+ L+H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELNH 61
Query: 189 INVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLK-FSEAQVKCYMQQLLCGLDHC 247
N++KL ++ + LYLVFE++ DL L +K Y+ QLL GL C
Sbjct: 62 PNIVKLLDVIHT--ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 248 HSRGVLHRDIKGSNLLIDNNGILKIADFGLA-SFYDPDQNQPLTSRVVTLWYRPPELLLG 306
HS VLHRD+K NLLI+ G +K+ADFGLA +F P + T VVTLWYR PE+LLG
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAPEILLG 177
Query: 307 ATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYW-RKSKLPHA 365
YY TAVD+WS GCI AE+ + + PG +E++QL +IF+ G+P E W + +P
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD- 236
Query: 366 TIFKPQQPYKRCVAETFKDFPAP----ALALMETLLSIDPADRGSAASALRSEFF--TMK 419
+KP P + + F P +L+ +L DP R SA +AL FF K
Sbjct: 237 --YKPSFP--KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 292
Query: 420 PLP 422
P+P
Sbjct: 293 PVP 295
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 211 bits (537), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 128/303 (42%), Positives = 178/303 (58%), Gaps = 20/303 (6%)
Query: 130 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMA-REIHILRRLDH 188
++F+K++KIG+GTY VY+AR+ ++VALKK+R D E E V A REI +L+ L+H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELNH 61
Query: 189 INVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLK-FSEAQVKCYMQQLLCGLDHC 247
N++KL ++ + LYLVFE++ DL L +K Y+ QLL GL C
Sbjct: 62 PNIVKLLDVIHT--ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 248 HSRGVLHRDIKGSNLLIDNNGILKIADFGLA-SFYDPDQNQPLTSRVVTLWYRPPELLLG 306
HS VLHRD+K NLLI+ G +K+ADFGLA +F P + T VVTLWYR PE+LLG
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAPEILLG 177
Query: 307 ATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYW-RKSKLPHA 365
YY TAVD+WS GCI AE+ + + PG +E++QL +IF+ G+P E W + +P
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD- 236
Query: 366 TIFKPQQPYKRCVAETFKDFPAP----ALALMETLLSIDPADRGSAASALRSEFF--TMK 419
+KP P + + F P +L+ +L DP R SA +AL FF K
Sbjct: 237 --YKPSFP--KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 292
Query: 420 PLP 422
P+P
Sbjct: 293 PVP 295
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 211 bits (537), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 128/303 (42%), Positives = 178/303 (58%), Gaps = 20/303 (6%)
Query: 130 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMA-REIHILRRLDH 188
++F+K++KIG+GTY VY+AR+ ++VALKK+R D E E V A REI +L+ L+H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELNH 60
Query: 189 INVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLK-FSEAQVKCYMQQLLCGLDHC 247
N++KL ++ + LYLVFE++ DL L +K Y+ QLL GL C
Sbjct: 61 PNIVKLLDVIHT--ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 248 HSRGVLHRDIKGSNLLIDNNGILKIADFGLA-SFYDPDQNQPLTSRVVTLWYRPPELLLG 306
HS VLHRD+K NLLI+ G +K+ADFGLA +F P + T VVTLWYR PE+LLG
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAPEILLG 176
Query: 307 ATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYW-RKSKLPHA 365
YY TAVD+WS GCI AE+ + + PG +E++QL +IF+ G+P E W + +P
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD- 235
Query: 366 TIFKPQQPYKRCVAETFKDFPAP----ALALMETLLSIDPADRGSAASALRSEFF--TMK 419
+KP P + + F P +L+ +L DP R SA +AL FF K
Sbjct: 236 --YKPSFP--KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 291
Query: 420 PLP 422
P+P
Sbjct: 292 PVP 294
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 211 bits (536), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 128/307 (41%), Positives = 178/307 (57%), Gaps = 20/307 (6%)
Query: 126 PRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMA-REIHILR 184
P ++F+K++KIG+GTY VY+AR+ ++VALKK+R D E E V A REI +L+
Sbjct: 2 PGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLK 60
Query: 185 RLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLK-FSEAQVKCYMQQLLCG 243
L+H N++KL ++ + LYLVFE++ DL L +K Y+ QLL G
Sbjct: 61 ELNHPNIVKLLDVIHTE--NKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYLFQLLQG 118
Query: 244 LDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLA-SFYDPDQNQPLTSRVVTLWYRPPE 302
L CHS VLHRD+K NLLI+ G +K+ADFGLA +F P + VVTLWYR PE
Sbjct: 119 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--XHEVVTLWYRAPE 176
Query: 303 LLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYW-RKSK 361
+LLG YY TAVD+WS GCI AE+ + + PG +E++QL +IF+ G+P E W +
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS 236
Query: 362 LPHATIFKPQQPYKRCVAETFKDFPAP----ALALMETLLSIDPADRGSAASALRSEFF- 416
+P +KP P + + F P +L+ +L DP R SA +AL FF
Sbjct: 237 MPD---YKPSFP--KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 291
Query: 417 -TMKPLP 422
KP+P
Sbjct: 292 DVTKPVP 298
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 211 bits (536), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 128/307 (41%), Positives = 178/307 (57%), Gaps = 20/307 (6%)
Query: 126 PRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMA-REIHILR 184
P ++F+K++KIG+GTY VY+AR+ ++VALKK+R D E E V A REI +L+
Sbjct: 2 PGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLK 60
Query: 185 RLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLK-FSEAQVKCYMQQLLCG 243
L+H N++KL ++ + LYLVFE++ DL L +K Y+ QLL G
Sbjct: 61 ELNHPNIVKLLDVIHTE--NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQG 118
Query: 244 LDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLA-SFYDPDQNQPLTSRVVTLWYRPPE 302
L CHS VLHRD+K NLLI+ G +K+ADFGLA +F P + VVTLWYR PE
Sbjct: 119 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--XHEVVTLWYRAPE 176
Query: 303 LLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYW-RKSK 361
+LLG YY TAVD+WS GCI AE+ + + PG +E++QL +IF+ G+P E W +
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS 236
Query: 362 LPHATIFKPQQPYKRCVAETFKDFPAP----ALALMETLLSIDPADRGSAASALRSEFF- 416
+P +KP P + + F P +L+ +L DP R SA +AL FF
Sbjct: 237 MPD---YKPSFP--KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 291
Query: 417 -TMKPLP 422
KP+P
Sbjct: 292 DVTKPVP 298
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 210 bits (535), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 128/307 (41%), Positives = 178/307 (57%), Gaps = 20/307 (6%)
Query: 126 PRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMA-REIHILR 184
P ++F+K++KIG+GTY VY+AR+ ++VALKK+R D E E V A REI +L+
Sbjct: 1 PGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLK 59
Query: 185 RLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLK-FSEAQVKCYMQQLLCG 243
L+H N++KL ++ + LYLVFE++ DL L +K Y+ QLL G
Sbjct: 60 ELNHPNIVKLLDVIHTE--NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQG 117
Query: 244 LDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLA-SFYDPDQNQPLTSRVVTLWYRPPE 302
L CHS VLHRD+K NLLI+ G +K+ADFGLA +F P + VVTLWYR PE
Sbjct: 118 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--XHEVVTLWYRAPE 175
Query: 303 LLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWR-KSK 361
+LLG YY TAVD+WS GCI AE+ + + PG +E++QL +IF+ G+P E W +
Sbjct: 176 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS 235
Query: 362 LPHATIFKPQQPYKRCVAETFKDFPAP----ALALMETLLSIDPADRGSAASALRSEFF- 416
+P +KP P + + F P +L+ +L DP R SA +AL FF
Sbjct: 236 MPD---YKPSFP--KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 290
Query: 417 -TMKPLP 422
KP+P
Sbjct: 291 DVTKPVP 297
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 210 bits (535), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 128/307 (41%), Positives = 178/307 (57%), Gaps = 20/307 (6%)
Query: 126 PRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMA-REIHILR 184
P ++F+K++KIG+GTY VY+AR+ ++VALKK+R D E E V A REI +L+
Sbjct: 1 PGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLK 59
Query: 185 RLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLK-FSEAQVKCYMQQLLCG 243
L+H N++KL ++ + LYLVFE++ DL L +K Y+ QLL G
Sbjct: 60 ELNHPNIVKLLDVIHTE--NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQG 117
Query: 244 LDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLA-SFYDPDQNQPLTSRVVTLWYRPPE 302
L CHS VLHRD+K NLLI+ G +K+ADFGLA +F P + VVTLWYR PE
Sbjct: 118 LAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTY--XHEVVTLWYRAPE 175
Query: 303 LLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYW-RKSK 361
+LLG YY TAVD+WS GCI AE+ + + PG +E++QL +IF+ G+P E W +
Sbjct: 176 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS 235
Query: 362 LPHATIFKPQQPYKRCVAETFKDFPAP----ALALMETLLSIDPADRGSAASALRSEFF- 416
+P +KP P + + F P +L+ +L DP R SA +AL FF
Sbjct: 236 MPD---YKPSFP--KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 290
Query: 417 -TMKPLP 422
KP+P
Sbjct: 291 DVTKPVP 297
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 210 bits (535), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 128/307 (41%), Positives = 178/307 (57%), Gaps = 20/307 (6%)
Query: 126 PRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMA-REIHILR 184
P ++F+K++KIG+GTY VY+AR+ ++VALKK+R D E E V A REI +L+
Sbjct: 1 PGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLK 59
Query: 185 RLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLK-FSEAQVKCYMQQLLCG 243
L+H N++KL ++ + LYLVFE++ DL L +K Y+ QLL G
Sbjct: 60 ELNHPNIVKLLDVIHTE--NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQG 117
Query: 244 LDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLA-SFYDPDQNQPLTSRVVTLWYRPPE 302
L CHS VLHRD+K NLLI+ G +K+ADFGLA +F P + VVTLWYR PE
Sbjct: 118 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--XHEVVTLWYRAPE 175
Query: 303 LLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWR-KSK 361
+LLG YY TAVD+WS GCI AE+ + + PG +E++QL +IF+ G+P E W +
Sbjct: 176 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS 235
Query: 362 LPHATIFKPQQPYKRCVAETFKDFPAP----ALALMETLLSIDPADRGSAASALRSEFF- 416
+P +KP P + + F P +L+ +L DP R SA +AL FF
Sbjct: 236 MPD---YKPSFP--KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 290
Query: 417 -TMKPLP 422
KP+P
Sbjct: 291 DVTKPVP 297
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 210 bits (534), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 128/303 (42%), Positives = 178/303 (58%), Gaps = 20/303 (6%)
Query: 130 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMA-REIHILRRLDH 188
++F+K++KIG+GTY VY+AR+ ++VALKK+R D E E V A REI +L+ L+H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELNH 60
Query: 189 INVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLK-FSEAQVKCYMQQLLCGLDHC 247
N++KL ++ + LYLVFE++ DL L +K Y+ QLL GL C
Sbjct: 61 PNIVKLLDVIHTE--NKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 248 HSRGVLHRDIKGSNLLIDNNGILKIADFGLA-SFYDPDQNQPLTSRVVTLWYRPPELLLG 306
HS VLHRD+K NLLI+ G +K+ADFGLA +F P + T VVTLWYR PE+LLG
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAPEILLG 176
Query: 307 ATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYW-RKSKLPHA 365
YY TAVD+WS GCI AE+ + + PG +E++QL +IF+ G+P E W + +P
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD- 235
Query: 366 TIFKPQQPYKRCVAETFKDFPAP----ALALMETLLSIDPADRGSAASALRSEFF--TMK 419
+KP P + + F P +L+ +L DP R SA +AL FF K
Sbjct: 236 --YKPSFP--KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 291
Query: 420 PLP 422
P+P
Sbjct: 292 PVP 294
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 210 bits (534), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 128/307 (41%), Positives = 179/307 (58%), Gaps = 20/307 (6%)
Query: 126 PRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMA-REIHILR 184
P ++F+K++KIG+GTY VY+AR+ ++VALKK+R D E E V A REI +L+
Sbjct: 2 PGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLK 60
Query: 185 RLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLK-FSEAQVKCYMQQLLCG 243
L+H N++KL ++ + LYLVFE+++ DL L +K Y+ QLL G
Sbjct: 61 ELNHPNIVKLLDVIHTE--NKLYLVFEHVDQDLKKFMDASALTGIPLPLIKSYLFQLLQG 118
Query: 244 LDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLA-SFYDPDQNQPLTSRVVTLWYRPPE 302
L CHS VLHRD+K NLLI+ G +K+ADFGLA +F P + VVTLWYR PE
Sbjct: 119 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--XHEVVTLWYRAPE 176
Query: 303 LLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYW-RKSK 361
+LLG YY TAVD+WS GCI AE+ + + PG +E++QL +IF+ G+P E W +
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS 236
Query: 362 LPHATIFKPQQPYKRCVAETFKDFPAP----ALALMETLLSIDPADRGSAASALRSEFF- 416
+P +KP P + + F P +L+ +L DP R SA +AL FF
Sbjct: 237 MPD---YKPSFP--KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 291
Query: 417 -TMKPLP 422
KP+P
Sbjct: 292 DVTKPVP 298
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 210 bits (534), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 121/290 (41%), Positives = 177/290 (61%), Gaps = 9/290 (3%)
Query: 130 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMA-REIHILRRLDH 188
+ ++KL+K+G+GTY VY+A+D Q +IVALK++R D E E + A REI +L+ L H
Sbjct: 21 EKYQKLEKVGEGTYGVVYKAKD-SQGRIVALKRIRLDA-EDEGIPSTAIREISLLKELHH 78
Query: 189 INVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCH 248
N++ L ++ S C L LVFE+ME DL + ++Q+K Y+ QLL G+ HCH
Sbjct: 79 PNIVSLIDVIHSE-RC-LTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCH 136
Query: 249 SRGVLHRDIKGSNLLIDNNGILKIADFGLA-SFYDPDQNQPLTSRVVTLWYRPPELLLGA 307
+LHRD+K NLLI+++G LK+ADFGLA +F P ++ T VVTLWYR P++L+G+
Sbjct: 137 QHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSY--THEVVTLWYRAPDVLMGS 194
Query: 308 TYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYW-RKSKLPHAT 366
Y T+VD+WS GCI AE+ GKP+ PG T+ +QL KIF + G+P+ W + +LP
Sbjct: 195 KKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWK 254
Query: 367 IFKPQQPYKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALRSEFF 416
Q K+ + F + L+ +L DP R SA A+ +F
Sbjct: 255 QRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYF 304
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 210 bits (534), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 121/290 (41%), Positives = 177/290 (61%), Gaps = 9/290 (3%)
Query: 130 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMA-REIHILRRLDH 188
+ ++KL+K+G+GTY VY+A+D Q +IVALK++R D E E + A REI +L+ L H
Sbjct: 21 EKYQKLEKVGEGTYGVVYKAKD-SQGRIVALKRIRLDA-EDEGIPSTAIREISLLKELHH 78
Query: 189 INVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCH 248
N++ L ++ S C L LVFE+ME DL + ++Q+K Y+ QLL G+ HCH
Sbjct: 79 PNIVSLIDVIHSE-RC-LTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCH 136
Query: 249 SRGVLHRDIKGSNLLIDNNGILKIADFGLA-SFYDPDQNQPLTSRVVTLWYRPPELLLGA 307
+LHRD+K NLLI+++G LK+ADFGLA +F P ++ T VVTLWYR P++L+G+
Sbjct: 137 QHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSY--THEVVTLWYRAPDVLMGS 194
Query: 308 TYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYW-RKSKLPHAT 366
Y T+VD+WS GCI AE+ GKP+ PG T+ +QL KIF + G+P+ W + +LP
Sbjct: 195 KKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWK 254
Query: 367 IFKPQQPYKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALRSEFF 416
Q K+ + F + L+ +L DP R SA A+ +F
Sbjct: 255 QRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYF 304
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 210 bits (534), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 120/289 (41%), Positives = 173/289 (59%), Gaps = 8/289 (2%)
Query: 132 FEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINV 191
+EKL+KIG+GTY V++A++ + +IVALK+VR D+ + REI +L+ L H N+
Sbjct: 4 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNI 63
Query: 192 IKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRG 251
++L ++ S L LVFE+ + DL VK ++ QLL GL CHSR
Sbjct: 64 VRLHDVLHSDKK--LTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRN 121
Query: 252 VLHRDIKGSNLLIDNNGILKIADFGLA-SFYDPDQNQPLTSRVVTLWYRPPELLLGATYY 310
VLHRD+K NLLI+ NG LK+A+FGLA +F P + ++ VVTLWYRPP++L GA Y
Sbjct: 122 VLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCY--SAEVVTLWYRPPDVLFGAKLY 179
Query: 311 GTAVDLWSTGCILAELY-AGKPIMPGRTEVEQLHKIFKLCGSPSEDYW-RKSKLPHATIF 368
T++D+WS GCI AEL AG+P+ PG +QL +IF+L G+P+E+ W +KLP +
Sbjct: 180 STSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPY 239
Query: 369 KPQQPYKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALRSEFFT 417
P P + A L++ LL +P R SA AL+ +F+
Sbjct: 240 -PMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFS 287
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 209 bits (533), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 120/289 (41%), Positives = 172/289 (59%), Gaps = 8/289 (2%)
Query: 132 FEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINV 191
+EKL+KIG+GTY V++A++ + +IVALK+VR D+ + REI +L+ L H N+
Sbjct: 4 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNI 63
Query: 192 IKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRG 251
++L ++ S L LVFE+ + DL VK ++ QLL GL CHSR
Sbjct: 64 VRLHDVLHSDKK--LTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRN 121
Query: 252 VLHRDIKGSNLLIDNNGILKIADFGLA-SFYDPDQNQPLTSRVVTLWYRPPELLLGATYY 310
VLHRD+K NLLI+ NG LK+ADFGLA +F P + ++ VVTLWYRPP++L GA Y
Sbjct: 122 VLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCY--SAEVVTLWYRPPDVLFGAKLY 179
Query: 311 GTAVDLWSTGCILAELY-AGKPIMPGRTEVEQLHKIFKLCGSPSEDYW-RKSKLPHATIF 368
T++D+WS GCI AEL A +P+ PG +QL +IF+L G+P+E+ W +KLP +
Sbjct: 180 STSIDMWSAGCIFAELANAARPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPY 239
Query: 369 KPQQPYKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALRSEFFT 417
P P + A L++ LL +P R SA AL+ +F+
Sbjct: 240 -PMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFS 287
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 209 bits (532), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 127/303 (41%), Positives = 177/303 (58%), Gaps = 20/303 (6%)
Query: 130 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMA-REIHILRRLDH 188
++F+K++KIG+GTY VY+AR+ ++VALKK+R D E E V A REI +L+ L+H
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELNH 64
Query: 189 INVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLK-FSEAQVKCYMQQLLCGLDHC 247
N++KL ++ + LYLVFE++ DL L +K Y+ QLL GL C
Sbjct: 65 PNIVKLLDVIHTE--NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 248 HSRGVLHRDIKGSNLLIDNNGILKIADFGLA-SFYDPDQNQPLTSRVVTLWYRPPELLLG 306
HS VLHRD+K NLLI+ G +K+ADFGLA +F P + VVTLWYR PE+LLG
Sbjct: 123 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--XHEVVTLWYRAPEILLG 180
Query: 307 ATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWR-KSKLPHA 365
YY TAVD+WS GCI AE+ + + PG +E++QL +IF+ G+P E W + +P
Sbjct: 181 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD- 239
Query: 366 TIFKPQQPYKRCVAETFKDFPAP----ALALMETLLSIDPADRGSAASALRSEFF--TMK 419
+KP P + + F P +L+ +L DP R SA +AL FF K
Sbjct: 240 --YKPSFP--KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 295
Query: 420 PLP 422
P+P
Sbjct: 296 PVP 298
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 209 bits (532), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 127/303 (41%), Positives = 177/303 (58%), Gaps = 20/303 (6%)
Query: 130 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMA-REIHILRRLDH 188
++F+K++KIG+GTY VY+AR+ ++VALKK+R D E E V A REI +L+ L+H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELNH 62
Query: 189 INVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLK-FSEAQVKCYMQQLLCGLDHC 247
N++KL ++ + LYLVFE++ DL L +K Y+ QLL GL C
Sbjct: 63 PNIVKLLDVIHTE--NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 248 HSRGVLHRDIKGSNLLIDNNGILKIADFGLA-SFYDPDQNQPLTSRVVTLWYRPPELLLG 306
HS VLHRD+K NLLI+ G +K+ADFGLA +F P + VVTLWYR PE+LLG
Sbjct: 121 HSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTY--XHEVVTLWYRAPEILLG 178
Query: 307 ATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYW-RKSKLPHA 365
YY TAVD+WS GCI AE+ + + PG +E++QL +IF+ G+P E W + +P
Sbjct: 179 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD- 237
Query: 366 TIFKPQQPYKRCVAETFKDFPAP----ALALMETLLSIDPADRGSAASALRSEFF--TMK 419
+KP P + + F P +L+ +L DP R SA +AL FF K
Sbjct: 238 --YKPSFP--KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 293
Query: 420 PLP 422
P+P
Sbjct: 294 PVP 296
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 209 bits (532), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 127/303 (41%), Positives = 177/303 (58%), Gaps = 20/303 (6%)
Query: 130 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMA-REIHILRRLDH 188
++F+K++KIG+GTY VY+AR+ ++VALKK+R D E E V A REI +L+ L+H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELNH 61
Query: 189 INVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLK-FSEAQVKCYMQQLLCGLDHC 247
N++KL ++ + LYLVFE++ DL L +K Y+ QLL GL C
Sbjct: 62 PNIVKLLDVIHTE--NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 248 HSRGVLHRDIKGSNLLIDNNGILKIADFGLA-SFYDPDQNQPLTSRVVTLWYRPPELLLG 306
HS VLHRD+K NLLI+ G +K+ADFGLA +F P + VVTLWYR PE+LLG
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--XHEVVTLWYRAPEILLG 177
Query: 307 ATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYW-RKSKLPHA 365
YY TAVD+WS GCI AE+ + + PG +E++QL +IF+ G+P E W + +P
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD- 236
Query: 366 TIFKPQQPYKRCVAETFKDFPAP----ALALMETLLSIDPADRGSAASALRSEFF--TMK 419
+KP P + + F P +L+ +L DP R SA +AL FF K
Sbjct: 237 --YKPSFP--KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 292
Query: 420 PLP 422
P+P
Sbjct: 293 PVP 295
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 209 bits (532), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 127/303 (41%), Positives = 177/303 (58%), Gaps = 20/303 (6%)
Query: 130 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMA-REIHILRRLDH 188
++F+K++KIG+GTY VY+AR+ ++VALKK+R D E E V A REI +L+ L+H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELNH 62
Query: 189 INVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLK-FSEAQVKCYMQQLLCGLDHC 247
N++KL ++ + LYLVFE++ DL L +K Y+ QLL GL C
Sbjct: 63 PNIVKLLDVIHTE--NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 248 HSRGVLHRDIKGSNLLIDNNGILKIADFGLA-SFYDPDQNQPLTSRVVTLWYRPPELLLG 306
HS VLHRD+K NLLI+ G +K+ADFGLA +F P + VVTLWYR PE+LLG
Sbjct: 121 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--XHEVVTLWYRAPEILLG 178
Query: 307 ATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYW-RKSKLPHA 365
YY TAVD+WS GCI AE+ + + PG +E++QL +IF+ G+P E W + +P
Sbjct: 179 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD- 237
Query: 366 TIFKPQQPYKRCVAETFKDFPAP----ALALMETLLSIDPADRGSAASALRSEFF--TMK 419
+KP P + + F P +L+ +L DP R SA +AL FF K
Sbjct: 238 --YKPSFP--KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 293
Query: 420 PLP 422
P+P
Sbjct: 294 PVP 296
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 209 bits (532), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 127/303 (41%), Positives = 177/303 (58%), Gaps = 20/303 (6%)
Query: 130 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMA-REIHILRRLDH 188
++F+K++KIG+GTY VY+AR+ ++VALKK+R D E E V A REI +L+ L+H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELNH 61
Query: 189 INVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLK-FSEAQVKCYMQQLLCGLDHC 247
N++KL ++ + LYLVFE++ DL L +K Y+ QLL GL C
Sbjct: 62 PNIVKLLDVIHTE--NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 248 HSRGVLHRDIKGSNLLIDNNGILKIADFGLA-SFYDPDQNQPLTSRVVTLWYRPPELLLG 306
HS VLHRD+K NLLI+ G +K+ADFGLA +F P + VVTLWYR PE+LLG
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--XHEVVTLWYRAPEILLG 177
Query: 307 ATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYW-RKSKLPHA 365
YY TAVD+WS GCI AE+ + + PG +E++QL +IF+ G+P E W + +P
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD- 236
Query: 366 TIFKPQQPYKRCVAETFKDFPAP----ALALMETLLSIDPADRGSAASALRSEFF--TMK 419
+KP P + + F P +L+ +L DP R SA +AL FF K
Sbjct: 237 --YKPSFP--KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 292
Query: 420 PLP 422
P+P
Sbjct: 293 PVP 295
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 209 bits (532), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 127/303 (41%), Positives = 177/303 (58%), Gaps = 20/303 (6%)
Query: 130 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMA-REIHILRRLDH 188
++F+K++KIG+GTY VY+AR+ ++VALKK+R D E E V A REI +L+ L+H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELNH 60
Query: 189 INVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLK-FSEAQVKCYMQQLLCGLDHC 247
N++KL ++ + LYLVFE++ DL L +K Y+ QLL GL C
Sbjct: 61 PNIVKLLDVIHTE--NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 248 HSRGVLHRDIKGSNLLIDNNGILKIADFGLA-SFYDPDQNQPLTSRVVTLWYRPPELLLG 306
HS VLHRD+K NLLI+ G +K+ADFGLA +F P + VVTLWYR PE+LLG
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--XHEVVTLWYRAPEILLG 176
Query: 307 ATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYW-RKSKLPHA 365
YY TAVD+WS GCI AE+ + + PG +E++QL +IF+ G+P E W + +P
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD- 235
Query: 366 TIFKPQQPYKRCVAETFKDFPAP----ALALMETLLSIDPADRGSAASALRSEFF--TMK 419
+KP P + + F P +L+ +L DP R SA +AL FF K
Sbjct: 236 --YKPSFP--KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 291
Query: 420 PLP 422
P+P
Sbjct: 292 PVP 294
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 209 bits (532), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 127/303 (41%), Positives = 177/303 (58%), Gaps = 20/303 (6%)
Query: 130 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMA-REIHILRRLDH 188
++F+K++KIG+GTY VY+AR+ ++VALKK+R D E E V A REI +L+ L+H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELNH 62
Query: 189 INVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLK-FSEAQVKCYMQQLLCGLDHC 247
N++KL ++ + LYLVFE++ DL L +K Y+ QLL GL C
Sbjct: 63 PNIVKLLDVIHTE--NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 248 HSRGVLHRDIKGSNLLIDNNGILKIADFGLA-SFYDPDQNQPLTSRVVTLWYRPPELLLG 306
HS VLHRD+K NLLI+ G +K+ADFGLA +F P + VVTLWYR PE+LLG
Sbjct: 121 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--XHEVVTLWYRAPEILLG 178
Query: 307 ATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYW-RKSKLPHA 365
YY TAVD+WS GCI AE+ + + PG +E++QL +IF+ G+P E W + +P
Sbjct: 179 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD- 237
Query: 366 TIFKPQQPYKRCVAETFKDFPAP----ALALMETLLSIDPADRGSAASALRSEFF--TMK 419
+KP P + + F P +L+ +L DP R SA +AL FF K
Sbjct: 238 --YKPSFP--KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 293
Query: 420 PLP 422
P+P
Sbjct: 294 PVP 296
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 209 bits (532), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 127/303 (41%), Positives = 177/303 (58%), Gaps = 20/303 (6%)
Query: 130 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMA-REIHILRRLDH 188
++F+K++KIG+GTY VY+AR+ ++VAL K+R D E E V A REI +L+ L+H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDT-ETEGVPSTAIREISLLKELNH 61
Query: 189 INVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLK-FSEAQVKCYMQQLLCGLDHC 247
N++KL ++ + LYLVFE++ DL L +K Y+ QLL GL C
Sbjct: 62 PNIVKLLDVIHTE--NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 248 HSRGVLHRDIKGSNLLIDNNGILKIADFGLA-SFYDPDQNQPLTSRVVTLWYRPPELLLG 306
HS VLHRD+K NLLI+ G +K+ADFGLA +F P + T VVTLWYR PE+LLG
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAPEILLG 177
Query: 307 ATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYW-RKSKLPHA 365
YY TAVD+WS GCI AE+ + + PG +E++QL +IF+ G+P E W + +P
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD- 236
Query: 366 TIFKPQQPYKRCVAETFKDFPAP----ALALMETLLSIDPADRGSAASALRSEFF--TMK 419
+KP P + + F P +L+ +L DP R SA +AL FF K
Sbjct: 237 --YKPSFP--KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 292
Query: 420 PLP 422
P+P
Sbjct: 293 PVP 295
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 209 bits (532), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 127/303 (41%), Positives = 177/303 (58%), Gaps = 20/303 (6%)
Query: 130 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMA-REIHILRRLDH 188
++F+K++KIG+GTY VY+AR+ ++VAL K+R D E E V A REI +L+ L+H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDT-ETEGVPSTAIREISLLKELNH 60
Query: 189 INVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLK-FSEAQVKCYMQQLLCGLDHC 247
N++KL ++ + LYLVFE++ DL L +K Y+ QLL GL C
Sbjct: 61 PNIVKLLDVIHTE--NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 248 HSRGVLHRDIKGSNLLIDNNGILKIADFGLA-SFYDPDQNQPLTSRVVTLWYRPPELLLG 306
HS VLHRD+K NLLI+ G +K+ADFGLA +F P + T VVTLWYR PE+LLG
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAPEILLG 176
Query: 307 ATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYW-RKSKLPHA 365
YY TAVD+WS GCI AE+ + + PG +E++QL +IF+ G+P E W + +P
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD- 235
Query: 366 TIFKPQQPYKRCVAETFKDFPAP----ALALMETLLSIDPADRGSAASALRSEFF--TMK 419
+KP P + + F P +L+ +L DP R SA +AL FF K
Sbjct: 236 --YKPSFP--KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 291
Query: 420 PLP 422
P+P
Sbjct: 292 PVP 294
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 209 bits (531), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 127/303 (41%), Positives = 177/303 (58%), Gaps = 20/303 (6%)
Query: 130 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMA-REIHILRRLDH 188
++F+K++KIG+GTY VY+AR+ ++VALKK+R D E E V A REI +L+ L+H
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELNH 65
Query: 189 INVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLK-FSEAQVKCYMQQLLCGLDHC 247
N++KL ++ + LYLVFE++ DL L +K Y+ QLL GL C
Sbjct: 66 PNIVKLLDVIHTE--NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 123
Query: 248 HSRGVLHRDIKGSNLLIDNNGILKIADFGLA-SFYDPDQNQPLTSRVVTLWYRPPELLLG 306
HS VLHRD+K NLLI+ G +K+ADFGLA +F P + VVTLWYR PE+LLG
Sbjct: 124 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--XHEVVTLWYRAPEILLG 181
Query: 307 ATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYW-RKSKLPHA 365
YY TAVD+WS GCI AE+ + + PG +E++QL +IF+ G+P E W + +P
Sbjct: 182 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD- 240
Query: 366 TIFKPQQPYKRCVAETFKDFPAP----ALALMETLLSIDPADRGSAASALRSEFF--TMK 419
+KP P + + F P +L+ +L DP R SA +AL FF K
Sbjct: 241 --YKPSFP--KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 296
Query: 420 PLP 422
P+P
Sbjct: 297 PVP 299
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 209 bits (531), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 127/303 (41%), Positives = 177/303 (58%), Gaps = 20/303 (6%)
Query: 130 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMA-REIHILRRLDH 188
++F+K++KIG+GTY VY+AR+ ++VALKK+R D E E V A REI +L+ L+H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELNH 60
Query: 189 INVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLK-FSEAQVKCYMQQLLCGLDHC 247
N++KL ++ + LYLVFE++ DL L +K Y+ QLL GL C
Sbjct: 61 PNIVKLLDVIHT--ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 248 HSRGVLHRDIKGSNLLIDNNGILKIADFGLA-SFYDPDQNQPLTSRVVTLWYRPPELLLG 306
HS VLHRD+K NLLI+ G +K+ADFGLA +F P + VVTLWYR PE+LLG
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--XHEVVTLWYRAPEILLG 176
Query: 307 ATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWR-KSKLPHA 365
YY TAVD+WS GCI AE+ + + PG +E++QL +IF+ G+P E W + +P
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD- 235
Query: 366 TIFKPQQPYKRCVAETFKDFPAP----ALALMETLLSIDPADRGSAASALRSEFF--TMK 419
+KP P + + F P +L+ +L DP R SA +AL FF K
Sbjct: 236 --YKPSFP--KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 291
Query: 420 PLP 422
P+P
Sbjct: 292 PVP 294
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 209 bits (531), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 127/303 (41%), Positives = 177/303 (58%), Gaps = 20/303 (6%)
Query: 130 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMA-REIHILRRLDH 188
++F+K++KIG+GTY VY+AR+ ++VALKK+R D E E V A REI +L+ L+H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELNH 61
Query: 189 INVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLK-FSEAQVKCYMQQLLCGLDHC 247
N++KL ++ + LYLVFE++ DL L +K Y+ QLL GL C
Sbjct: 62 PNIVKLLDVIHTE--NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 248 HSRGVLHRDIKGSNLLIDNNGILKIADFGLA-SFYDPDQNQPLTSRVVTLWYRPPELLLG 306
HS VLHRD+K NLLI+ G +K+ADFGLA +F P + VVTLWYR PE+LLG
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--XHEVVTLWYRAPEILLG 177
Query: 307 ATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWR-KSKLPHA 365
YY TAVD+WS GCI AE+ + + PG +E++QL +IF+ G+P E W + +P
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD- 236
Query: 366 TIFKPQQPYKRCVAETFKDFPAP----ALALMETLLSIDPADRGSAASALRSEFF--TMK 419
+KP P + + F P +L+ +L DP R SA +AL FF K
Sbjct: 237 --YKPSFP--KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 292
Query: 420 PLP 422
P+P
Sbjct: 293 PVP 295
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 209 bits (531), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 127/303 (41%), Positives = 177/303 (58%), Gaps = 20/303 (6%)
Query: 130 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMA-REIHILRRLDH 188
++F+K++KIG+GTY VY+AR+ ++VALKK+R D E E V A REI +L+ L+H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELNH 61
Query: 189 INVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLK-FSEAQVKCYMQQLLCGLDHC 247
N++KL ++ + LYLVFE++ DL L +K Y+ QLL GL C
Sbjct: 62 PNIVKLLDVIHTE--NKLYLVFEFLHQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 248 HSRGVLHRDIKGSNLLIDNNGILKIADFGLA-SFYDPDQNQPLTSRVVTLWYRPPELLLG 306
HS VLHRD+K NLLI+ G +K+ADFGLA +F P + VVTLWYR PE+LLG
Sbjct: 120 HSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTY--XHEVVTLWYRAPEILLG 177
Query: 307 ATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYW-RKSKLPHA 365
YY TAVD+WS GCI AE+ + + PG +E++QL +IF+ G+P E W + +P
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD- 236
Query: 366 TIFKPQQPYKRCVAETFKDFPAP----ALALMETLLSIDPADRGSAASALRSEFF--TMK 419
+KP P + + F P +L+ +L DP R SA +AL FF K
Sbjct: 237 --YKPSFP--KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 292
Query: 420 PLP 422
P+P
Sbjct: 293 PVP 295
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 209 bits (531), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 127/303 (41%), Positives = 177/303 (58%), Gaps = 20/303 (6%)
Query: 130 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMA-REIHILRRLDH 188
++F+K++KIG+GTY VY+AR+ ++VALKK+R D E E V A REI +L+ L+H
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELNH 63
Query: 189 INVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLK-FSEAQVKCYMQQLLCGLDHC 247
N++KL ++ + LYLVFE++ DL L +K Y+ QLL GL C
Sbjct: 64 PNIVKLLDVIHTE--NKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFC 121
Query: 248 HSRGVLHRDIKGSNLLIDNNGILKIADFGLA-SFYDPDQNQPLTSRVVTLWYRPPELLLG 306
HS VLHRD+K NLLI+ G +K+ADFGLA +F P + VVTLWYR PE+LLG
Sbjct: 122 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--XHEVVTLWYRAPEILLG 179
Query: 307 ATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYW-RKSKLPHA 365
YY TAVD+WS GCI AE+ + + PG +E++QL +IF+ G+P E W + +P
Sbjct: 180 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD- 238
Query: 366 TIFKPQQPYKRCVAETFKDFPAP----ALALMETLLSIDPADRGSAASALRSEFF--TMK 419
+KP P + + F P +L+ +L DP R SA +AL FF K
Sbjct: 239 --YKPSFP--KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 294
Query: 420 PLP 422
P+P
Sbjct: 295 PVP 297
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 208 bits (530), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 127/303 (41%), Positives = 177/303 (58%), Gaps = 20/303 (6%)
Query: 130 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMA-REIHILRRLDH 188
++F+K++KIG+GTY VY+AR+ ++VALKK+R D E E V A REI +L+ L+H
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELNH 64
Query: 189 INVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLK-FSEAQVKCYMQQLLCGLDHC 247
N++KL ++ + LYLVFE++ DL L +K Y+ QLL GL C
Sbjct: 65 PNIVKLLDVIHTE--NKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 248 HSRGVLHRDIKGSNLLIDNNGILKIADFGLA-SFYDPDQNQPLTSRVVTLWYRPPELLLG 306
HS VLHRD+K NLLI+ G +K+ADFGLA +F P + VVTLWYR PE+LLG
Sbjct: 123 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--XHEVVTLWYRAPEILLG 180
Query: 307 ATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWR-KSKLPHA 365
YY TAVD+WS GCI AE+ + + PG +E++QL +IF+ G+P E W + +P
Sbjct: 181 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD- 239
Query: 366 TIFKPQQPYKRCVAETFKDFPAP----ALALMETLLSIDPADRGSAASALRSEFF--TMK 419
+KP P + + F P +L+ +L DP R SA +AL FF K
Sbjct: 240 --YKPSFP--KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 295
Query: 420 PLP 422
P+P
Sbjct: 296 PVP 298
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 208 bits (530), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 127/303 (41%), Positives = 177/303 (58%), Gaps = 20/303 (6%)
Query: 130 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMA-REIHILRRLDH 188
++F+K++KIG+GTY VY+AR+ ++VALKK+R D E E V A REI +L+ L+H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELNH 62
Query: 189 INVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLK-FSEAQVKCYMQQLLCGLDHC 247
N++KL ++ + LYLVFE++ DL L +K Y+ QLL GL C
Sbjct: 63 PNIVKLLDVIHTE--NKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 248 HSRGVLHRDIKGSNLLIDNNGILKIADFGLA-SFYDPDQNQPLTSRVVTLWYRPPELLLG 306
HS VLHRD+K NLLI+ G +K+ADFGLA +F P + VVTLWYR PE+LLG
Sbjct: 121 HSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTY--XHEVVTLWYRAPEILLG 178
Query: 307 ATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYW-RKSKLPHA 365
YY TAVD+WS GCI AE+ + + PG +E++QL +IF+ G+P E W + +P
Sbjct: 179 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD- 237
Query: 366 TIFKPQQPYKRCVAETFKDFPAP----ALALMETLLSIDPADRGSAASALRSEFF--TMK 419
+KP P + + F P +L+ +L DP R SA +AL FF K
Sbjct: 238 --YKPSFP--KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 293
Query: 420 PLP 422
P+P
Sbjct: 294 PVP 296
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 208 bits (530), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 127/303 (41%), Positives = 177/303 (58%), Gaps = 20/303 (6%)
Query: 130 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMA-REIHILRRLDH 188
++F+K++KIG+GTY VY+AR+ ++VALKK+R D E E V A REI +L+ L+H
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELNH 64
Query: 189 INVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLK-FSEAQVKCYMQQLLCGLDHC 247
N++KL ++ + LYLVFE++ DL L +K Y+ QLL GL C
Sbjct: 65 PNIVKLLDVIHTE--NKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 248 HSRGVLHRDIKGSNLLIDNNGILKIADFGLA-SFYDPDQNQPLTSRVVTLWYRPPELLLG 306
HS VLHRD+K NLLI+ G +K+ADFGLA +F P + VVTLWYR PE+LLG
Sbjct: 123 HSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTY--XHEVVTLWYRAPEILLG 180
Query: 307 ATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYW-RKSKLPHA 365
YY TAVD+WS GCI AE+ + + PG +E++QL +IF+ G+P E W + +P
Sbjct: 181 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD- 239
Query: 366 TIFKPQQPYKRCVAETFKDFPAP----ALALMETLLSIDPADRGSAASALRSEFF--TMK 419
+KP P + + F P +L+ +L DP R SA +AL FF K
Sbjct: 240 --YKPSFP--KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 295
Query: 420 PLP 422
P+P
Sbjct: 296 PVP 298
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 207 bits (526), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 124/295 (42%), Positives = 173/295 (58%), Gaps = 18/295 (6%)
Query: 130 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMA-REIHILRRLDH 188
++F+K++KIG+GTY VY+AR+ ++VALKK+R D E E V A REI +L+ L+H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELNH 61
Query: 189 INVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLK-FSEAQVKCYMQQLLCGLDHC 247
N++KL ++ + LYLVFE++ DL L +K Y+ QLL GL C
Sbjct: 62 PNIVKLLDVIHTE--NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 248 HSRGVLHRDIKGSNLLIDNNGILKIADFGLA-SFYDPDQNQPLTSRVVTLWYRPPELLLG 306
HS VLHRD+K NLLI+ G +K+ADFGLA +F P + VVTLWYR PE+LLG
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--XHEVVTLWYRAPEILLG 177
Query: 307 ATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYW-RKSKLPHA 365
YY TAVD+WS GCI AE+ + + PG +E++QL +IF+ G+P E W + +P
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD- 236
Query: 366 TIFKPQQPYKRCVAETFKDFPAP----ALALMETLLSIDPADRGSAASALRSEFF 416
+KP P + + F P +L+ +L DP R SA +AL FF
Sbjct: 237 --YKPSFP--KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 287
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 194 bits (493), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 113/294 (38%), Positives = 172/294 (58%), Gaps = 18/294 (6%)
Query: 130 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHI 189
+ + L+KIG+GTY VY+A++ + + ALKK+R + + REI IL+ L H
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKHS 60
Query: 190 NVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHS 249
N++KL ++ ++ L LVFE+++ DL L K ++ QLL G+ +CH
Sbjct: 61 NIVKLYDVIHTKKR--LVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHD 118
Query: 250 RGVLHRDIKGSNLLIDNNGILKIADFGLA-SFYDPDQNQPLTSRVVTLWYRPPELLLGAT 308
R VLHRD+K NLLI+ G LKIADFGLA +F P + T VVTLWYR P++L+G+
Sbjct: 119 RRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKY--THEVVTLWYRAPDVLMGSK 176
Query: 309 YYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYW-RKSKL----P 363
Y T +D+WS GCI AE+ G P+ PG +E +QL +IF++ G+P+ W ++L P
Sbjct: 177 KYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDP 236
Query: 364 HATIFKPQQPYKRCVAETF-KDFPAPALALMETLLSIDPADRGSAASALRSEFF 416
+ T+++P P+ E+F K + L+ +L +DP R +A AL +F
Sbjct: 237 NFTVYEP-LPW-----ESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYF 284
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 194 bits (493), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 113/294 (38%), Positives = 172/294 (58%), Gaps = 18/294 (6%)
Query: 130 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHI 189
+ + L+KIG+GTY VY+A++ + + ALKK+R + + REI IL+ L H
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKHS 60
Query: 190 NVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHS 249
N++KL ++ ++ L LVFE+++ DL L K ++ QLL G+ +CH
Sbjct: 61 NIVKLYDVIHTKKR--LVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHD 118
Query: 250 RGVLHRDIKGSNLLIDNNGILKIADFGLA-SFYDPDQNQPLTSRVVTLWYRPPELLLGAT 308
R VLHRD+K NLLI+ G LKIADFGLA +F P + T VVTLWYR P++L+G+
Sbjct: 119 RRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKY--THEVVTLWYRAPDVLMGSK 176
Query: 309 YYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYW-RKSKL----P 363
Y T +D+WS GCI AE+ G P+ PG +E +QL +IF++ G+P+ W ++L P
Sbjct: 177 KYSTTIDIWSVGCIFAEMVNGAPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDP 236
Query: 364 HATIFKPQQPYKRCVAETF-KDFPAPALALMETLLSIDPADRGSAASALRSEFF 416
+ T+++P P+ E+F K + L+ +L +DP R +A AL +F
Sbjct: 237 NFTVYEP-LPW-----ESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYF 284
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 194 bits (492), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 112/294 (38%), Positives = 172/294 (58%), Gaps = 18/294 (6%)
Query: 130 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHI 189
+ + L+KIG+GTY VY+A++ + + ALKK+R + + REI IL+ L H
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKHS 60
Query: 190 NVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHS 249
N++KL ++ ++ L LVFE+++ DL L K ++ QLL G+ +CH
Sbjct: 61 NIVKLYDVIHTKKR--LVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHD 118
Query: 250 RGVLHRDIKGSNLLIDNNGILKIADFGLA-SFYDPDQNQPLTSRVVTLWYRPPELLLGAT 308
R VLHRD+K NLLI+ G LKIADFGLA +F P + T +VTLWYR P++L+G+
Sbjct: 119 RRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKY--THEIVTLWYRAPDVLMGSK 176
Query: 309 YYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYW-RKSKL----P 363
Y T +D+WS GCI AE+ G P+ PG +E +QL +IF++ G+P+ W ++L P
Sbjct: 177 KYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDP 236
Query: 364 HATIFKPQQPYKRCVAETF-KDFPAPALALMETLLSIDPADRGSAASALRSEFF 416
+ T+++P P+ E+F K + L+ +L +DP R +A AL +F
Sbjct: 237 NFTVYEP-LPW-----ESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYF 284
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 193 bits (491), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 114/292 (39%), Positives = 168/292 (57%), Gaps = 13/292 (4%)
Query: 130 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHI 189
+++ KLDK+G+GTY+ VY+ + +VALK++R ++ E + RE+ +L+ L H
Sbjct: 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAI-REVSLLKDLKHA 60
Query: 190 NVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHS 249
N++ L ++ + S L LVFEY++ DL G + VK ++ QLL GL +CH
Sbjct: 61 NIVTLHDIIHTEKS--LTLVFEYLDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHR 118
Query: 250 RGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGATY 309
+ VLHRD+K NLLI+ G LK+ADFGLA + + VVTLWYRPP++LLG+T
Sbjct: 119 QKVLHRDLKPQNLLINERGELKLADFGLAR-AKSIPTKTYDNEVVTLWYRPPDILLGSTD 177
Query: 310 YGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSKLPHATIFK 369
Y T +D+W GCI E+ G+P+ PG T EQLH IF++ G+P+E+ W + FK
Sbjct: 178 YSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETW--PGILSNEEFK 235
Query: 370 PQQPYKRCVAETFKDFPAPAL-----ALMETLLSIDPADRGSAASALRSEFF 416
Y + AE AP L L+ LL + +R SA A++ FF
Sbjct: 236 TYN-YPKYRAEALLSH-APRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFF 285
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 187 bits (474), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 114/300 (38%), Positives = 172/300 (57%), Gaps = 18/300 (6%)
Query: 129 ADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDH 188
+ F++L+K+G GTY+ VY+ + VALK+V+ D+ E + REI +++ L H
Sbjct: 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDS-EEGTPSTAIREISLMKELKH 62
Query: 189 INVIKLEGLVTSRMSCSLYLVFEYMEHDLA------GLASHP-GLKFSEAQVKCYMQQLL 241
N+++L ++ + L LVFE+M++DL + + P GL+ + VK + QLL
Sbjct: 63 ENIVRLYDVIHTE--NKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELN--LVKYFQWQLL 118
Query: 242 CGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPP 301
GL CH +LHRD+K NLLI+ G LK+ DFGLA + N +S VVTLWYR P
Sbjct: 119 QGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNT-FSSEVVTLWYRAP 177
Query: 302 ELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYW-RKS 360
++L+G+ Y T++D+WS GCILAE+ GKP+ PG + EQL IF + G+P+E W +
Sbjct: 178 DVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVT 237
Query: 361 KLPHATIFKPQQPYK--RCVAE--TFKDFPAPALALMETLLSIDPADRGSAASALRSEFF 416
KLP Q+P + R V + T + + + LL ++P R SA AL +F
Sbjct: 238 KLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWF 297
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 184 bits (468), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 108/300 (36%), Positives = 170/300 (56%), Gaps = 22/300 (7%)
Query: 130 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHI 189
D + ++ K+G+GTY VY+A D + VA+K++R ++ E RE+ +L+ L H
Sbjct: 34 DRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHR 93
Query: 190 NVIKLEGLVTSRMSCSLYLVFEYMEHDLAG-LASHPGLKFSEAQVKCYMQQLLCGLDHCH 248
N+I+L+ ++ + L+L+FEY E+DL + +P + S +K ++ QL+ G++ CH
Sbjct: 94 NIIELKSVI--HHNHRLHLIFEYAENDLKKYMDKNPDV--SMRVIKSFLYQLINGVNFCH 149
Query: 249 SRGVLHRDIKGSNLLID-----NNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPEL 303
SR LHRD+K NLL+ +LKI DFGLA + Q T ++TLWYRPPE+
Sbjct: 150 SRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQ-FTHEIITLWYRPPEI 208
Query: 304 LLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSKLP 363
LLG+ +Y T+VD+WS CI AE+ P+ PG +E++QL KIF++ G P + W P
Sbjct: 209 LLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTW-----P 263
Query: 364 HATIFKP-QQPYKRCVAETFKDF-----PAPALALMETLLSIDPADRGSAASALRSEFFT 417
T +Q + + +T K L L+ +L +DP R SA +AL +F+
Sbjct: 264 GVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHPYFS 323
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 182 bits (462), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 119/295 (40%), Positives = 160/295 (54%), Gaps = 18/295 (6%)
Query: 132 FEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLD---H 188
+E + +IG G Y VY+ARD VALK VR N E RE+ +LRRL+ H
Sbjct: 6 YEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEH 65
Query: 189 INVIKLEGLV-TSRM--SCSLYLVFEYMEHDLAGL---ASHPGLKFSEAQVKCYMQQLLC 242
NV++L + TSR + LVFE+++ DL A PGL +K M+Q L
Sbjct: 66 PNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGL--PAETIKDLMRQFLR 123
Query: 243 GLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPE 302
GLD H+ ++HRD+K N+L+ + G +K+ADFGLA Y L VVTLWYR PE
Sbjct: 124 GLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYS--YQMALAPVVVTLWYRAPE 181
Query: 303 LLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYW-RKSK 361
+LL +TY T VD+WS GCI AE++ KP+ G +E +QL KIF L G P ED W R
Sbjct: 182 VLLQSTY-ATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVS 240
Query: 362 LPHATIFKPQQPYKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALRSEFF 416
LP F P+ P R V + L+ +L+ +P R SA AL+ +
Sbjct: 241 LPRGA-FPPRGP--RPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYL 292
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 182 bits (461), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 119/298 (39%), Positives = 160/298 (53%), Gaps = 21/298 (7%)
Query: 132 FEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRF---MAREIHILRRLD- 187
+E + +IG G Y VY+ARD VALK VR N RE+ +LRRL+
Sbjct: 11 YEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEA 70
Query: 188 --HINVIKLEGLV-TSRM--SCSLYLVFEYMEHDLAGL---ASHPGLKFSEAQVKCYMQQ 239
H NV++L + TSR + LVFE+++ DL A PGL +K M+Q
Sbjct: 71 FEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGL--PAETIKDLMRQ 128
Query: 240 LLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYR 299
L GLD H+ ++HRD+K N+L+ + G +K+ADFGLA Y LT VVTLWYR
Sbjct: 129 FLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYS--YQMALTPVVVTLWYR 186
Query: 300 PPELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYW-R 358
PE+LL +TY T VD+WS GCI AE++ KP+ G +E +QL KIF L G P ED W R
Sbjct: 187 APEVLLQSTY-ATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPR 245
Query: 359 KSKLPHATIFKPQQPYKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALRSEFF 416
LP F P+ P R V + L+ +L+ +P R SA AL+ +
Sbjct: 246 DVSLPRGA-FPPRGP--RPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYL 300
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 182 bits (461), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 119/295 (40%), Positives = 160/295 (54%), Gaps = 18/295 (6%)
Query: 132 FEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLD---H 188
+E + +IG G Y VY+ARD VALK VR N E RE+ +LRRL+ H
Sbjct: 6 YEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEH 65
Query: 189 INVIKLEGLV-TSRM--SCSLYLVFEYMEHDLAGL---ASHPGLKFSEAQVKCYMQQLLC 242
NV++L + TSR + LVFE+++ DL A PGL +K M+Q L
Sbjct: 66 PNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGL--PAETIKDLMRQFLR 123
Query: 243 GLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPE 302
GLD H+ ++HRD+K N+L+ + G +K+ADFGLA Y L VVTLWYR PE
Sbjct: 124 GLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYS--YQMALDPVVVTLWYRAPE 181
Query: 303 LLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYW-RKSK 361
+LL +TY T VD+WS GCI AE++ KP+ G +E +QL KIF L G P ED W R
Sbjct: 182 VLLQSTY-ATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVS 240
Query: 362 LPHATIFKPQQPYKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALRSEFF 416
LP F P+ P R V + L+ +L+ +P R SA AL+ +
Sbjct: 241 LPRGA-FPPRGP--RPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYL 292
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 182 bits (461), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 119/295 (40%), Positives = 160/295 (54%), Gaps = 18/295 (6%)
Query: 132 FEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLD---H 188
+E + +IG G Y VY+ARD VALK VR N E RE+ +LRRL+ H
Sbjct: 6 YEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEH 65
Query: 189 INVIKLEGLV-TSRM--SCSLYLVFEYMEHDLAGL---ASHPGLKFSEAQVKCYMQQLLC 242
NV++L + TSR + LVFE+++ DL A PGL +K M+Q L
Sbjct: 66 PNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGL--PAETIKDLMRQFLR 123
Query: 243 GLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPE 302
GLD H+ ++HRD+K N+L+ + G +K+ADFGLA Y L VVTLWYR PE
Sbjct: 124 GLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYS--YQMALFPVVVTLWYRAPE 181
Query: 303 LLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYW-RKSK 361
+LL +TY T VD+WS GCI AE++ KP+ G +E +QL KIF L G P ED W R
Sbjct: 182 VLLQSTY-ATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVS 240
Query: 362 LPHATIFKPQQPYKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALRSEFF 416
LP F P+ P R V + L+ +L+ +P R SA AL+ +
Sbjct: 241 LPRGA-FPPRGP--RPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYL 292
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 122/300 (40%), Positives = 167/300 (55%), Gaps = 18/300 (6%)
Query: 128 RADS-FEKLDKIGQGTYSNVYRARDL-DQKKIVALKKVRFDNLEPESVRFMAREIHILRR 185
RAD +E + +IG+G Y V++ARDL + + VALK+VR E RE+ +LR
Sbjct: 8 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRH 67
Query: 186 L---DHINVIKLEGLVTSRMS---CSLYLVFEYMEHDLAG-LASHPGLKFSEAQVKCYMQ 238
L +H NV++L + T + L LVFE+++ DL L P +K M
Sbjct: 68 LETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMF 127
Query: 239 QLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWY 298
QLL GLD HS V+HRD+K N+L+ ++G +K+ADFGLA Y LTS VVTLWY
Sbjct: 128 QLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIY--SFQMALTSVVVTLWY 185
Query: 299 RPPELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYW- 357
R PE+LL ++ Y T VDLWS GCI AE++ KP+ G ++V+QL KI + G P E+ W
Sbjct: 186 RAPEVLLQSS-YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWP 244
Query: 358 RKSKLPHATIF-KPQQPYKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALRSEFF 416
R LP K QP ++ V D L+ L+ +PA R SA SAL +F
Sbjct: 245 RDVALPRQAFHSKSAQPIEKFVT----DIDELGKDLLLKCLTFNPAKRISAYSALSHPYF 300
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 179 bits (455), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 122/300 (40%), Positives = 167/300 (55%), Gaps = 18/300 (6%)
Query: 128 RADS-FEKLDKIGQGTYSNVYRARDL-DQKKIVALKKVRFDNLEPESVRFMAREIHILRR 185
RAD +E + +IG+G Y V++ARDL + + VALK+VR E RE+ +LR
Sbjct: 8 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRH 67
Query: 186 L---DHINVIKLEGLVTSRMS---CSLYLVFEYMEHDLAG-LASHPGLKFSEAQVKCYMQ 238
L +H NV++L + T + L LVFE+++ DL L P +K M
Sbjct: 68 LETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMF 127
Query: 239 QLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWY 298
QLL GLD HS V+HRD+K N+L+ ++G +K+ADFGLA Y LTS VVTLWY
Sbjct: 128 QLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIY--SFQMALTSVVVTLWY 185
Query: 299 RPPELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYW- 357
R PE+LL ++ Y T VDLWS GCI AE++ KP+ G ++V+QL KI + G P E+ W
Sbjct: 186 RAPEVLLQSS-YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWP 244
Query: 358 RKSKLPHATIF-KPQQPYKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALRSEFF 416
R LP K QP ++ V D L+ L+ +PA R SA SAL +F
Sbjct: 245 RDVALPRQAFHSKSAQPIEKFVT----DIDELGKDLLLKCLTFNPAKRISAYSALSHPYF 300
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 179 bits (455), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 122/300 (40%), Positives = 167/300 (55%), Gaps = 18/300 (6%)
Query: 128 RADS-FEKLDKIGQGTYSNVYRARDL-DQKKIVALKKVRFDNLEPESVRFMAREIHILRR 185
RAD +E + +IG+G Y V++ARDL + + VALK+VR E RE+ +LR
Sbjct: 8 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRH 67
Query: 186 L---DHINVIKLEGLVTSRMS---CSLYLVFEYMEHDLAG-LASHPGLKFSEAQVKCYMQ 238
L +H NV++L + T + L LVFE+++ DL L P +K M
Sbjct: 68 LETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMF 127
Query: 239 QLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWY 298
QLL GLD HS V+HRD+K N+L+ ++G +K+ADFGLA Y LTS VVTLWY
Sbjct: 128 QLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIY--SFQMALTSVVVTLWY 185
Query: 299 RPPELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYW- 357
R PE+LL ++ Y T VDLWS GCI AE++ KP+ G ++V+QL KI + G P E+ W
Sbjct: 186 RAPEVLLQSS-YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWP 244
Query: 358 RKSKLPHATIF-KPQQPYKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALRSEFF 416
R LP K QP ++ V D L+ L+ +PA R SA SAL +F
Sbjct: 245 RDVALPRQAFHSKSAQPIEKFVT----DIDELGKDLLLKCLTFNPAKRISAYSALSHPYF 300
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 172 bits (435), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 109/299 (36%), Positives = 161/299 (53%), Gaps = 26/299 (8%)
Query: 131 SFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHIN 190
S+ IG G++ VY+A+ D ++VA+KKV D RF RE+ I+R+LDH N
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKNRELQIMRKLDHCN 108
Query: 191 VIKLEGLVTS----RMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQ-------VKCYMQQ 239
+++L S + L LV +Y+ + +A H +S A+ VK YM Q
Sbjct: 109 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH----YSRAKQTLPVIYVKLYMYQ 164
Query: 240 LLCGLDHCHSRGVLHRDIKGSNLLID-NNGILKIADFGLASFYDPDQNQPLTSRVVTLWY 298
L L + HS G+ HRDIK NLL+D + +LK+ DFG A + +P S + + +Y
Sbjct: 165 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVSXICSRYY 222
Query: 299 RPPELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWR 358
R PEL+ GAT Y +++D+WS GC+LAEL G+PI PG + V+QL +I K+ G+P+ + R
Sbjct: 223 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIR 282
Query: 359 KSKLPHATIFKPQQPYKRCVAETFKD-FPAPALALMETLLSIDPADRGSAASALRSEFF 416
+ P+ T FK Q + F+ P A+AL LL P R + A FF
Sbjct: 283 EMN-PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 340
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 171 bits (434), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 109/299 (36%), Positives = 161/299 (53%), Gaps = 26/299 (8%)
Query: 131 SFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHIN 190
S+ IG G++ VY+A+ D ++VA+KKV D RF RE+ I+R+LDH N
Sbjct: 57 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKNRELQIMRKLDHCN 110
Query: 191 VIKLEGLVTS----RMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQ-------VKCYMQQ 239
+++L S + L LV +Y+ + +A H +S A+ VK YM Q
Sbjct: 111 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH----YSRAKQTLPVIYVKLYMYQ 166
Query: 240 LLCGLDHCHSRGVLHRDIKGSNLLID-NNGILKIADFGLASFYDPDQNQPLTSRVVTLWY 298
L L + HS G+ HRDIK NLL+D + +LK+ DFG A + +P S + + +Y
Sbjct: 167 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVSYICSRYY 224
Query: 299 RPPELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWR 358
R PEL+ GAT Y +++D+WS GC+LAEL G+PI PG + V+QL +I K+ G+P+ + R
Sbjct: 225 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIR 284
Query: 359 KSKLPHATIFKPQQPYKRCVAETFKD-FPAPALALMETLLSIDPADRGSAASALRSEFF 416
+ P+ T FK Q + F+ P A+AL LL P R + A FF
Sbjct: 285 EMN-PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 342
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 171 bits (434), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 109/299 (36%), Positives = 161/299 (53%), Gaps = 26/299 (8%)
Query: 131 SFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHIN 190
S+ IG G++ VY+A+ D ++VA+KKV D RF RE+ I+R+LDH N
Sbjct: 59 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKNRELQIMRKLDHCN 112
Query: 191 VIKLEGLVTS----RMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQ-------VKCYMQQ 239
+++L S + L LV +Y+ + +A H +S A+ VK YM Q
Sbjct: 113 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH----YSRAKQTLPVIYVKLYMYQ 168
Query: 240 LLCGLDHCHSRGVLHRDIKGSNLLID-NNGILKIADFGLASFYDPDQNQPLTSRVVTLWY 298
L L + HS G+ HRDIK NLL+D + +LK+ DFG A + +P S + + +Y
Sbjct: 169 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVSYICSRYY 226
Query: 299 RPPELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWR 358
R PEL+ GAT Y +++D+WS GC+LAEL G+PI PG + V+QL +I K+ G+P+ + R
Sbjct: 227 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIR 286
Query: 359 KSKLPHATIFKPQQPYKRCVAETFKD-FPAPALALMETLLSIDPADRGSAASALRSEFF 416
+ P+ T FK Q + F+ P A+AL LL P R + A FF
Sbjct: 287 EMN-PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 344
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 171 bits (434), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 109/299 (36%), Positives = 161/299 (53%), Gaps = 26/299 (8%)
Query: 131 SFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHIN 190
S+ IG G++ VY+A+ D ++VA+KKV D RF RE+ I+R+LDH N
Sbjct: 100 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKNRELQIMRKLDHCN 153
Query: 191 VIKLEGLVTS----RMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQ-------VKCYMQQ 239
+++L S + L LV +Y+ + +A H +S A+ VK YM Q
Sbjct: 154 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH----YSRAKQTLPVIYVKLYMYQ 209
Query: 240 LLCGLDHCHSRGVLHRDIKGSNLLID-NNGILKIADFGLASFYDPDQNQPLTSRVVTLWY 298
L L + HS G+ HRDIK NLL+D + +LK+ DFG A + +P S + + +Y
Sbjct: 210 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVSYICSRYY 267
Query: 299 RPPELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWR 358
R PEL+ GAT Y +++D+WS GC+LAEL G+PI PG + V+QL +I K+ G+P+ + R
Sbjct: 268 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIR 327
Query: 359 KSKLPHATIFKPQQPYKRCVAETFKD-FPAPALALMETLLSIDPADRGSAASALRSEFF 416
+ P+ T FK Q + F+ P A+AL LL P R + A FF
Sbjct: 328 EMN-PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 385
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 171 bits (434), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 109/299 (36%), Positives = 161/299 (53%), Gaps = 26/299 (8%)
Query: 131 SFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHIN 190
S+ IG G++ VY+A+ D ++VA+KKV D RF RE+ I+R+LDH N
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKNRELQIMRKLDHCN 108
Query: 191 VIKLEGLVTS----RMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQ-------VKCYMQQ 239
+++L S + L LV +Y+ + +A H +S A+ VK YM Q
Sbjct: 109 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH----YSRAKQTLPVIYVKLYMYQ 164
Query: 240 LLCGLDHCHSRGVLHRDIKGSNLLID-NNGILKIADFGLASFYDPDQNQPLTSRVVTLWY 298
L L + HS G+ HRDIK NLL+D + +LK+ DFG A + +P S + + +Y
Sbjct: 165 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVSYICSRYY 222
Query: 299 RPPELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWR 358
R PEL+ GAT Y +++D+WS GC+LAEL G+PI PG + V+QL +I K+ G+P+ + R
Sbjct: 223 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIR 282
Query: 359 KSKLPHATIFKPQQPYKRCVAETFKD-FPAPALALMETLLSIDPADRGSAASALRSEFF 416
+ P+ T FK Q + F+ P A+AL LL P R + A FF
Sbjct: 283 EMN-PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 340
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 109/299 (36%), Positives = 161/299 (53%), Gaps = 26/299 (8%)
Query: 131 SFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHIN 190
S+ IG G++ VY+A+ D ++VA+KKV D RF RE+ I+R+LDH N
Sbjct: 49 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKNRELQIMRKLDHCN 102
Query: 191 VIKLEGLVTS----RMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQ-------VKCYMQQ 239
+++L S + L LV +Y+ + +A H +S A+ VK YM Q
Sbjct: 103 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH----YSRAKQTLPVIYVKLYMYQ 158
Query: 240 LLCGLDHCHSRGVLHRDIKGSNLLID-NNGILKIADFGLASFYDPDQNQPLTSRVVTLWY 298
L L + HS G+ HRDIK NLL+D + +LK+ DFG A + +P S + + +Y
Sbjct: 159 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVSYICSRYY 216
Query: 299 RPPELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWR 358
R PEL+ GAT Y +++D+WS GC+LAEL G+PI PG + V+QL +I K+ G+P+ + R
Sbjct: 217 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIR 276
Query: 359 KSKLPHATIFKPQQPYKRCVAETFKD-FPAPALALMETLLSIDPADRGSAASALRSEFF 416
+ P+ T FK Q + F+ P A+AL LL P R + A FF
Sbjct: 277 EMN-PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 334
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 171 bits (432), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 109/299 (36%), Positives = 161/299 (53%), Gaps = 26/299 (8%)
Query: 131 SFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHIN 190
S+ IG G++ VY+A+ D ++VA+KKV D RF RE+ I+R+LDH N
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKNRELQIMRKLDHCN 86
Query: 191 VIKLEGLVTS----RMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQ-------VKCYMQQ 239
+++L S + L LV +Y+ + +A H +S A+ VK YM Q
Sbjct: 87 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH----YSRAKQTLPVIYVKLYMYQ 142
Query: 240 LLCGLDHCHSRGVLHRDIKGSNLLID-NNGILKIADFGLASFYDPDQNQPLTSRVVTLWY 298
L L + HS G+ HRDIK NLL+D + +LK+ DFG A + +P S + + +Y
Sbjct: 143 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVSXICSRYY 200
Query: 299 RPPELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWR 358
R PEL+ GAT Y +++D+WS GC+LAEL G+PI PG + V+QL +I K+ G+P+ + R
Sbjct: 201 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIR 260
Query: 359 KSKLPHATIFKPQQPYKRCVAETFKD-FPAPALALMETLLSIDPADRGSAASALRSEFF 416
+ P+ T FK Q + F+ P A+AL LL P R + A FF
Sbjct: 261 EMN-PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 318
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 109/299 (36%), Positives = 161/299 (53%), Gaps = 26/299 (8%)
Query: 131 SFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHIN 190
S+ IG G++ VY+A+ D ++VA+KKV D RF RE+ I+R+LDH N
Sbjct: 29 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKNRELQIMRKLDHCN 82
Query: 191 VIKLEGLVTS----RMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQ-------VKCYMQQ 239
+++L S + L LV +Y+ + +A H +S A+ VK YM Q
Sbjct: 83 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH----YSRAKQTLPVIYVKLYMYQ 138
Query: 240 LLCGLDHCHSRGVLHRDIKGSNLLID-NNGILKIADFGLASFYDPDQNQPLTSRVVTLWY 298
L L + HS G+ HRDIK NLL+D + +LK+ DFG A + +P S + + +Y
Sbjct: 139 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVSXICSRYY 196
Query: 299 RPPELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWR 358
R PEL+ GAT Y +++D+WS GC+LAEL G+PI PG + V+QL +I K+ G+P+ + R
Sbjct: 197 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIR 256
Query: 359 KSKLPHATIFKPQQPYKRCVAETFKD-FPAPALALMETLLSIDPADRGSAASALRSEFF 416
+ P+ T FK Q + F+ P A+AL LL P R + A FF
Sbjct: 257 EMN-PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 314
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 109/299 (36%), Positives = 161/299 (53%), Gaps = 26/299 (8%)
Query: 131 SFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHIN 190
S+ IG G++ VY+A+ D ++VA+KKV D RF RE+ I+R+LDH N
Sbjct: 26 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKNRELQIMRKLDHCN 79
Query: 191 VIKLEGLVTS----RMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQ-------VKCYMQQ 239
+++L S + L LV +Y+ + +A H +S A+ VK YM Q
Sbjct: 80 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH----YSRAKQTLPVIYVKLYMYQ 135
Query: 240 LLCGLDHCHSRGVLHRDIKGSNLLID-NNGILKIADFGLASFYDPDQNQPLTSRVVTLWY 298
L L + HS G+ HRDIK NLL+D + +LK+ DFG A + +P S + + +Y
Sbjct: 136 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVSYICSRYY 193
Query: 299 RPPELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWR 358
R PEL+ GAT Y +++D+WS GC+LAEL G+PI PG + V+QL +I K+ G+P+ + R
Sbjct: 194 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIR 253
Query: 359 KSKLPHATIFKPQQPYKRCVAETFKD-FPAPALALMETLLSIDPADRGSAASALRSEFF 416
+ P+ T FK Q + F+ P A+AL LL P R + A FF
Sbjct: 254 EMN-PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 311
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 109/299 (36%), Positives = 161/299 (53%), Gaps = 26/299 (8%)
Query: 131 SFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHIN 190
S+ IG G++ VY+A+ D ++VA+KKV D RF RE+ I+R+LDH N
Sbjct: 40 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKNRELQIMRKLDHCN 93
Query: 191 VIKLEGLVTS----RMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQ-------VKCYMQQ 239
+++L S + L LV +Y+ + +A H +S A+ VK YM Q
Sbjct: 94 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH----YSRAKQTLPVIYVKLYMYQ 149
Query: 240 LLCGLDHCHSRGVLHRDIKGSNLLID-NNGILKIADFGLASFYDPDQNQPLTSRVVTLWY 298
L L + HS G+ HRDIK NLL+D + +LK+ DFG A + +P S + + +Y
Sbjct: 150 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVSXICSRYY 207
Query: 299 RPPELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWR 358
R PEL+ GAT Y +++D+WS GC+LAEL G+PI PG + V+QL +I K+ G+P+ + R
Sbjct: 208 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIR 267
Query: 359 KSKLPHATIFKPQQPYKRCVAETFKD-FPAPALALMETLLSIDPADRGSAASALRSEFF 416
+ P+ T FK Q + F+ P A+AL LL P R + A FF
Sbjct: 268 EMN-PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 325
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 109/299 (36%), Positives = 161/299 (53%), Gaps = 26/299 (8%)
Query: 131 SFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHIN 190
S+ IG G++ VY+A+ D ++VA+KKV D RF RE+ I+R+LDH N
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKNRELQIMRKLDHCN 86
Query: 191 VIKLEGLVTS----RMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQ-------VKCYMQQ 239
+++L S + L LV +Y+ + +A H +S A+ VK YM Q
Sbjct: 87 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH----YSRAKQTLPVIYVKLYMYQ 142
Query: 240 LLCGLDHCHSRGVLHRDIKGSNLLID-NNGILKIADFGLASFYDPDQNQPLTSRVVTLWY 298
L L + HS G+ HRDIK NLL+D + +LK+ DFG A + +P S + + +Y
Sbjct: 143 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVSXICSRYY 200
Query: 299 RPPELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWR 358
R PEL+ GAT Y +++D+WS GC+LAEL G+PI PG + V+QL +I K+ G+P+ + R
Sbjct: 201 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIR 260
Query: 359 KSKLPHATIFKPQQPYKRCVAETFKD-FPAPALALMETLLSIDPADRGSAASALRSEFF 416
+ P+ T FK Q + F+ P A+AL LL P R + A FF
Sbjct: 261 EMN-PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 318
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 109/299 (36%), Positives = 161/299 (53%), Gaps = 26/299 (8%)
Query: 131 SFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHIN 190
S+ IG G++ VY+A+ D ++VA+KKV D RF RE+ I+R+LDH N
Sbjct: 34 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKNRELQIMRKLDHCN 87
Query: 191 VIKLEGLVTS----RMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQ-------VKCYMQQ 239
+++L S + L LV +Y+ + +A H +S A+ VK YM Q
Sbjct: 88 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH----YSRAKQTLPVIYVKLYMYQ 143
Query: 240 LLCGLDHCHSRGVLHRDIKGSNLLID-NNGILKIADFGLASFYDPDQNQPLTSRVVTLWY 298
L L + HS G+ HRDIK NLL+D + +LK+ DFG A + +P S + + +Y
Sbjct: 144 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVSYICSRYY 201
Query: 299 RPPELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWR 358
R PEL+ GAT Y +++D+WS GC+LAEL G+PI PG + V+QL +I K+ G+P+ + R
Sbjct: 202 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIR 261
Query: 359 KSKLPHATIFKPQQPYKRCVAETFKD-FPAPALALMETLLSIDPADRGSAASALRSEFF 416
+ P+ T FK Q + F+ P A+AL LL P R + A FF
Sbjct: 262 EMN-PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 319
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 170 bits (430), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 109/299 (36%), Positives = 161/299 (53%), Gaps = 26/299 (8%)
Query: 131 SFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHIN 190
S+ IG G++ VY+A+ D ++VA+KKV D RF RE+ I+R+LDH N
Sbjct: 25 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKNRELQIMRKLDHCN 78
Query: 191 VIKLEGLVTS----RMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQ-------VKCYMQQ 239
+++L S + L LV +Y+ + +A H +S A+ VK YM Q
Sbjct: 79 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH----YSRAKQTLPVIYVKLYMYQ 134
Query: 240 LLCGLDHCHSRGVLHRDIKGSNLLID-NNGILKIADFGLASFYDPDQNQPLTSRVVTLWY 298
L L + HS G+ HRDIK NLL+D + +LK+ DFG A + +P S + + +Y
Sbjct: 135 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVSXICSRYY 192
Query: 299 RPPELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWR 358
R PEL+ GAT Y +++D+WS GC+LAEL G+PI PG + V+QL +I K+ G+P+ + R
Sbjct: 193 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIR 252
Query: 359 KSKLPHATIFKPQQPYKRCVAETFKD-FPAPALALMETLLSIDPADRGSAASALRSEFF 416
+ P+ T FK Q + F+ P A+AL LL P R + A FF
Sbjct: 253 EMN-PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 310
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 169 bits (429), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 109/299 (36%), Positives = 161/299 (53%), Gaps = 26/299 (8%)
Query: 131 SFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHIN 190
S+ IG G++ VY+A+ D ++VA+KKV D RF RE+ I+R+LDH N
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKNRELQIMRKLDHCN 74
Query: 191 VIKLEGLVTS----RMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQ-------VKCYMQQ 239
+++L S + L LV +Y+ + +A H +S A+ VK YM Q
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH----YSRAKQTLPVIYVKLYMYQ 130
Query: 240 LLCGLDHCHSRGVLHRDIKGSNLLID-NNGILKIADFGLASFYDPDQNQPLTSRVVTLWY 298
L L + HS G+ HRDIK NLL+D + +LK+ DFG A + +P S + + +Y
Sbjct: 131 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVSXICSRYY 188
Query: 299 RPPELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWR 358
R PEL+ GAT Y +++D+WS GC+LAEL G+PI PG + V+QL +I K+ G+P+ + R
Sbjct: 189 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIR 248
Query: 359 KSKLPHATIFKPQQPYKRCVAETFKD-FPAPALALMETLLSIDPADRGSAASALRSEFF 416
+ P+ T FK Q + F+ P A+AL LL P R + A FF
Sbjct: 249 EMN-PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 306
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 169 bits (429), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 109/299 (36%), Positives = 161/299 (53%), Gaps = 26/299 (8%)
Query: 131 SFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHIN 190
S+ IG G++ VY+A+ D ++VA+KKV D RF RE+ I+R+LDH N
Sbjct: 22 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKNRELQIMRKLDHCN 75
Query: 191 VIKLEGLVTS----RMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQ-------VKCYMQQ 239
+++L S + L LV +Y+ + +A H +S A+ VK YM Q
Sbjct: 76 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH----YSRAKQTLPVIYVKLYMYQ 131
Query: 240 LLCGLDHCHSRGVLHRDIKGSNLLID-NNGILKIADFGLASFYDPDQNQPLTSRVVTLWY 298
L L + HS G+ HRDIK NLL+D + +LK+ DFG A + +P S + + +Y
Sbjct: 132 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVSXICSRYY 189
Query: 299 RPPELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWR 358
R PEL+ GAT Y +++D+WS GC+LAEL G+PI PG + V+QL +I K+ G+P+ + R
Sbjct: 190 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIR 249
Query: 359 KSKLPHATIFKPQQPYKRCVAETFKD-FPAPALALMETLLSIDPADRGSAASALRSEFF 416
+ P+ T FK Q + F+ P A+AL LL P R + A FF
Sbjct: 250 EMN-PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 307
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 169 bits (429), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 109/299 (36%), Positives = 161/299 (53%), Gaps = 26/299 (8%)
Query: 131 SFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHIN 190
S+ IG G++ VY+A+ D ++VA+KKV D RF RE+ I+R+LDH N
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKNRELQIMRKLDHCN 74
Query: 191 VIKLEGLVTS----RMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQ-------VKCYMQQ 239
+++L S + L LV +Y+ + +A H +S A+ VK YM Q
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH----YSRAKQTLPVIYVKLYMYQ 130
Query: 240 LLCGLDHCHSRGVLHRDIKGSNLLID-NNGILKIADFGLASFYDPDQNQPLTSRVVTLWY 298
L L + HS G+ HRDIK NLL+D + +LK+ DFG A + +P S + + +Y
Sbjct: 131 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVSXICSRYY 188
Query: 299 RPPELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWR 358
R PEL+ GAT Y +++D+WS GC+LAEL G+PI PG + V+QL +I K+ G+P+ + R
Sbjct: 189 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIR 248
Query: 359 KSKLPHATIFKPQQPYKRCVAETFKD-FPAPALALMETLLSIDPADRGSAASALRSEFF 416
+ P+ T FK Q + F+ P A+AL LL P R + A FF
Sbjct: 249 EMN-PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 306
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 169 bits (428), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 109/299 (36%), Positives = 161/299 (53%), Gaps = 26/299 (8%)
Query: 131 SFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHIN 190
S+ IG G++ VY+A+ D ++VA+KKV D RF RE+ I+R+LDH N
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKNRELQIMRKLDHCN 74
Query: 191 VIKLEGLVTS----RMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQ-------VKCYMQQ 239
+++L S + L LV +Y+ + +A H +S A+ VK YM Q
Sbjct: 75 IVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARH----YSRAKQTLPVIYVKLYMYQ 130
Query: 240 LLCGLDHCHSRGVLHRDIKGSNLLID-NNGILKIADFGLASFYDPDQNQPLTSRVVTLWY 298
L L + HS G+ HRDIK NLL+D + +LK+ DFG A + +P S + + +Y
Sbjct: 131 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVSXICSRYY 188
Query: 299 RPPELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWR 358
R PEL+ GAT Y +++D+WS GC+LAEL G+PI PG + V+QL +I K+ G+P+ + R
Sbjct: 189 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIR 248
Query: 359 KSKLPHATIFKPQQPYKRCVAETFKD-FPAPALALMETLLSIDPADRGSAASALRSEFF 416
+ P+ T FK Q + F+ P A+AL LL P R + A FF
Sbjct: 249 EMN-PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 306
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 169 bits (428), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 109/299 (36%), Positives = 161/299 (53%), Gaps = 26/299 (8%)
Query: 131 SFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHIN 190
S+ IG G++ VY+A+ D ++VA+KKV D RF RE+ I+R+LDH N
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKNRELQIMRKLDHCN 74
Query: 191 VIKLEGLVTS----RMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQ-------VKCYMQQ 239
+++L S + L LV +Y+ + +A H +S A+ VK YM Q
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH----YSRAKQTLPVIYVKLYMYQ 130
Query: 240 LLCGLDHCHSRGVLHRDIKGSNLLID-NNGILKIADFGLASFYDPDQNQPLTSRVVTLWY 298
L L + HS G+ HRDIK NLL+D + +LK+ DFG A + +P S + + +Y
Sbjct: 131 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVSYICSRYY 188
Query: 299 RPPELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWR 358
R PEL+ GAT Y +++D+WS GC+LAEL G+PI PG + V+QL +I K+ G+P+ + R
Sbjct: 189 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIR 248
Query: 359 KSKLPHATIFKPQQPYKRCVAETFKD-FPAPALALMETLLSIDPADRGSAASALRSEFF 416
+ P+ T FK Q + F+ P A+AL LL P R + A FF
Sbjct: 249 EMN-PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 306
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 166 bits (421), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 100/303 (33%), Positives = 153/303 (50%), Gaps = 33/303 (10%)
Query: 130 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHI 189
+ +EK+ KIG+G+Y V++ R+ D +IVA+KK +P + REI +L++L H
Sbjct: 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHP 62
Query: 190 NVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHS 249
N++ L L R L+LVFEY +H + E VK Q L ++ CH
Sbjct: 63 NLVNL--LEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHK 120
Query: 250 RGVLHRDIKGSNLLIDNNGILKIADFGLA-------SFYDPDQNQPLTSRVVTLWYRPPE 302
+HRD+K N+LI + ++K+ DFG A +YD V T WYR PE
Sbjct: 121 HNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYD--------DEVATRWYRSPE 172
Query: 303 LLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGS---------PS 353
LL+G T YG VD+W+ GC+ AEL +G P+ PG+++V+QL+ I K G +
Sbjct: 173 LLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFST 232
Query: 354 EDYWRKSKLPHATIFKPQQPYKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALRS 413
Y+ K+P +P + F + PAL L++ L +DP +R + L
Sbjct: 233 NQYFSGVKIPDPEDMEP-------LELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHH 285
Query: 414 EFF 416
+F
Sbjct: 286 PYF 288
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 165 bits (418), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 107/299 (35%), Positives = 160/299 (53%), Gaps = 26/299 (8%)
Query: 131 SFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHIN 190
S+ IG G++ VY+A+ D ++VA+KKV + F RE+ I+R+LDH N
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL------QGKAFKNRELQIMRKLDHCN 74
Query: 191 VIKLEGLVTS----RMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQ-------VKCYMQQ 239
+++L S + L LV +Y+ + +A H +S A+ VK YM Q
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH----YSRAKQTLPVIYVKLYMYQ 130
Query: 240 LLCGLDHCHSRGVLHRDIKGSNLLID-NNGILKIADFGLASFYDPDQNQPLTSRVVTLWY 298
L L + HS G+ HRDIK NLL+D + +LK+ DFG A + +P S + + +Y
Sbjct: 131 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVSYICSRYY 188
Query: 299 RPPELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWR 358
R PEL+ GAT Y +++D+WS GC+LAEL G+PI PG + V+QL +I K+ G+P+ + R
Sbjct: 189 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIR 248
Query: 359 KSKLPHATIFKPQQPYKRCVAETFKD-FPAPALALMETLLSIDPADRGSAASALRSEFF 416
+ P+ T FK Q + F+ P A+AL LL P R + A FF
Sbjct: 249 EMN-PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 306
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 165 bits (417), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 116/340 (34%), Positives = 169/340 (49%), Gaps = 29/340 (8%)
Query: 119 EAIQGWVPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAR 178
E ++G V + L IG+G Y V A D K VA+KK+ + R + R
Sbjct: 12 EMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL-R 70
Query: 179 EIHILRRLDHINVIKLEGLV---TSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKC 235
EI IL R H N+I + ++ T +Y+V + ME DL L L S +
Sbjct: 71 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHL--SNDHICY 128
Query: 236 YMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQP--LTSRV 293
++ Q+L GL + HS VLHRD+K SNLL++ LKI DFGLA DPD + LT V
Sbjct: 129 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYV 188
Query: 294 VTLWYRPPELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPS 353
T WYR PE++L + Y ++D+WS GCILAE+ + +PI PG+ ++QL+ I + GSPS
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 248
Query: 354 EDYWRKS----------KLPHATIFKPQQPYKRCVAETFKDFPAPALALMETLLSIDPAD 403
++ LPH K + P+ R F + + AL L++ +L+ +P
Sbjct: 249 QEDLNXIINLKARNYLLSLPH----KNKVPWNRL----FPNADSKALDLLDKMLTFNPHK 300
Query: 404 RGSAASALRSEFFTMKPLPCDPSSLPKYPPSKEFDAKIRD 443
R AL + DPS P +FD ++ D
Sbjct: 301 RIEVEQALAHPYLEQY---YDPSDEPIAEAPFKFDMELDD 337
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 114/332 (34%), Positives = 167/332 (50%), Gaps = 13/332 (3%)
Query: 119 EAIQGWVPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAR 178
E ++G V + L IG+G Y V A D K VA+KK+ + R + R
Sbjct: 12 EMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL-R 70
Query: 179 EIHILRRLDHINVIKLEGLV---TSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKC 235
EI IL R H N+I + ++ T +Y+V + ME DL L L S +
Sbjct: 71 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHL--SNDHICY 128
Query: 236 YMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQP--LTSRV 293
++ Q+L GL + HS VLHRD+K SNLL++ LKI DFGLA DPD + LT V
Sbjct: 129 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYV 188
Query: 294 VTLWYRPPELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPS 353
T WYR PE++L + Y ++D+WS GCILAE+ + +PI PG+ ++QL+ I + GSPS
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 248
Query: 354 EDYWRKSKLPHATIFKPQQPYKRCV--AETFKDFPAPALALMETLLSIDPADRGSAASAL 411
++ A + P+K V F + + AL L++ +L+ +P R AL
Sbjct: 249 QEDLNXIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 308
Query: 412 RSEFFTMKPLPCDPSSLPKYPPSKEFDAKIRD 443
+ DPS P +FD ++ D
Sbjct: 309 AHPYLEQY---YDPSDEPIAEAPFKFDMELDD 337
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 117/340 (34%), Positives = 172/340 (50%), Gaps = 29/340 (8%)
Query: 119 EAIQGWVPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAR 178
E ++G V + L IG+G Y V A D K VA+KK+ + R + R
Sbjct: 16 EMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTL-R 74
Query: 179 EIHILRRLDHINVIKLEGLV---TSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKC 235
EI IL R H N+I + ++ T +Y+V + ME DL L L S +
Sbjct: 75 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHL--SNDHICY 132
Query: 236 YMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQP--LTSRV 293
++ Q+L GL + HS VLHRD+K SNLL++ LKI DFGLA DPD + LT V
Sbjct: 133 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYV 192
Query: 294 VTLWYRPPELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPS 353
T WYR PE++L + Y ++D+WS GCILAE+ + +PI PG+ ++QL+ I + GSPS
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 252
Query: 354 EDYWR-----KSK-----LPHATIFKPQQPYKRCVAETFKDFPAPALALMETLLSIDPAD 403
++ K++ LPH K + P+ R F + + AL L++ +L+ +P
Sbjct: 253 QEDLNCIINLKARNYLLSLPH----KNKVPWNRL----FPNADSKALDLLDKMLTFNPHK 304
Query: 404 RGSAASALRSEFFTMKPLPCDPSSLPKYPPSKEFDAKIRD 443
R AL + DPS P +FD ++ D
Sbjct: 305 RIEVEQALAHPYLEQY---YDPSDEPIAEAPFKFDMELDD 341
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 117/340 (34%), Positives = 172/340 (50%), Gaps = 29/340 (8%)
Query: 119 EAIQGWVPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAR 178
E ++G V + L IG+G Y V A D K VA+KK+ + R + R
Sbjct: 20 EMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL-R 78
Query: 179 EIHILRRLDHINVIKLEGLV---TSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKC 235
EI IL R H N+I + ++ T +Y+V + ME DL L L S +
Sbjct: 79 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHL--SNDHICY 136
Query: 236 YMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQP--LTSRV 293
++ Q+L GL + HS VLHRD+K SNLL++ LKI DFGLA DPD + LT V
Sbjct: 137 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 196
Query: 294 VTLWYRPPELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPS 353
T WYR PE++L + Y ++D+WS GCILAE+ + +PI PG+ ++QL+ I + GSPS
Sbjct: 197 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 256
Query: 354 EDYWR-----KSK-----LPHATIFKPQQPYKRCVAETFKDFPAPALALMETLLSIDPAD 403
++ K++ LPH K + P+ R F + + AL L++ +L+ +P
Sbjct: 257 QEDLNCIINLKARNYLLSLPH----KNKVPWNR----LFPNADSKALDLLDKMLTFNPHK 308
Query: 404 RGSAASALRSEFFTMKPLPCDPSSLPKYPPSKEFDAKIRD 443
R AL + DPS P +FD ++ D
Sbjct: 309 RIEVEQALAHPYLEQY---YDPSDEPIAEAPFKFDMELDD 345
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 117/340 (34%), Positives = 172/340 (50%), Gaps = 29/340 (8%)
Query: 119 EAIQGWVPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAR 178
E ++G V + L IG+G Y V A D K VA+KK+ + R + R
Sbjct: 12 EMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL-R 70
Query: 179 EIHILRRLDHINVIKLEGLV---TSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKC 235
EI IL R H N+I + ++ T +Y+V + ME DL L L S +
Sbjct: 71 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHL--SNDHICY 128
Query: 236 YMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQP--LTSRV 293
++ Q+L GL + HS VLHRD+K SNLL++ LKI DFGLA DPD + LT V
Sbjct: 129 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 188
Query: 294 VTLWYRPPELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPS 353
T WYR PE++L + Y ++D+WS GCILAE+ + +PI PG+ ++QL+ I + GSPS
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 248
Query: 354 EDYWR-----KSK-----LPHATIFKPQQPYKRCVAETFKDFPAPALALMETLLSIDPAD 403
++ K++ LPH K + P+ R F + + AL L++ +L+ +P
Sbjct: 249 QEDLNCIINLKARNYLLSLPH----KNKVPWNR----LFPNADSKALDLLDKMLTFNPHK 300
Query: 404 RGSAASALRSEFFTMKPLPCDPSSLPKYPPSKEFDAKIRD 443
R AL + DPS P +FD ++ D
Sbjct: 301 RIEVEQALAHPYLEQY---YDPSDEPIAEAPFKFDMELDD 337
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 117/340 (34%), Positives = 172/340 (50%), Gaps = 29/340 (8%)
Query: 119 EAIQGWVPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAR 178
E ++G V + L IG+G Y V A D K VA+KK+ + R + R
Sbjct: 32 EMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL-R 90
Query: 179 EIHILRRLDHINVIKLEGLV---TSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKC 235
EI IL R H N+I + ++ T +Y+V + ME DL L L S +
Sbjct: 91 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHL--SNDHICY 148
Query: 236 YMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQP--LTSRV 293
++ Q+L GL + HS VLHRD+K SNLL++ LKI DFGLA DPD + LT V
Sbjct: 149 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 208
Query: 294 VTLWYRPPELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPS 353
T WYR PE++L + Y ++D+WS GCILAE+ + +PI PG+ ++QL+ I + GSPS
Sbjct: 209 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 268
Query: 354 EDYWR-----KSK-----LPHATIFKPQQPYKRCVAETFKDFPAPALALMETLLSIDPAD 403
++ K++ LPH K + P+ R F + + AL L++ +L+ +P
Sbjct: 269 QEDLNCIINLKARNYLLSLPH----KNKVPWNR----LFPNADSKALDLLDKMLTFNPHK 320
Query: 404 RGSAASALRSEFFTMKPLPCDPSSLPKYPPSKEFDAKIRD 443
R AL + DPS P +FD ++ D
Sbjct: 321 RIEVEQALAHPYLEQY---YDPSDEPIAEAPFKFDMELDD 357
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 117/340 (34%), Positives = 172/340 (50%), Gaps = 29/340 (8%)
Query: 119 EAIQGWVPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAR 178
E ++G V + L IG+G Y V A D K VA+KK+ + R + R
Sbjct: 12 EMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL-R 70
Query: 179 EIHILRRLDHINVIKLEGLV---TSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKC 235
EI IL R H N+I + ++ T +Y+V + ME DL L L S +
Sbjct: 71 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHL--SNDHICY 128
Query: 236 YMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQP--LTSRV 293
++ Q+L GL + HS VLHRD+K SNLL++ LKI DFGLA DPD + LT V
Sbjct: 129 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYV 188
Query: 294 VTLWYRPPELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPS 353
T WYR PE++L + Y ++D+WS GCILAE+ + +PI PG+ ++QL+ I + GSPS
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 248
Query: 354 EDYWR-----KSK-----LPHATIFKPQQPYKRCVAETFKDFPAPALALMETLLSIDPAD 403
++ K++ LPH K + P+ R F + + AL L++ +L+ +P
Sbjct: 249 QEDLNCIINLKARNYLLSLPH----KNKVPWNRL----FPNADSKALDLLDKMLTFNPHK 300
Query: 404 RGSAASALRSEFFTMKPLPCDPSSLPKYPPSKEFDAKIRD 443
R AL + DPS P +FD ++ D
Sbjct: 301 RIEVEQALAHPYLEQY---YDPSDEPIAEAPFKFDMELDD 337
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 117/340 (34%), Positives = 172/340 (50%), Gaps = 29/340 (8%)
Query: 119 EAIQGWVPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAR 178
E ++G V + L IG+G Y V A D K VA+KK+ + R + R
Sbjct: 16 EMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL-R 74
Query: 179 EIHILRRLDHINVIKLEGLV---TSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKC 235
EI IL R H N+I + ++ T +Y+V + ME DL L L S +
Sbjct: 75 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHL--SNDHICY 132
Query: 236 YMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQP--LTSRV 293
++ Q+L GL + HS VLHRD+K SNLL++ LKI DFGLA DPD + LT V
Sbjct: 133 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYV 192
Query: 294 VTLWYRPPELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPS 353
T WYR PE++L + Y ++D+WS GCILAE+ + +PI PG+ ++QL+ I + GSPS
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 252
Query: 354 EDYWR-----KSK-----LPHATIFKPQQPYKRCVAETFKDFPAPALALMETLLSIDPAD 403
++ K++ LPH K + P+ R F + + AL L++ +L+ +P
Sbjct: 253 QEDLNCIINLKARNYLLSLPH----KNKVPWNRL----FPNADSKALDLLDKMLTFNPHK 304
Query: 404 RGSAASALRSEFFTMKPLPCDPSSLPKYPPSKEFDAKIRD 443
R AL + DPS P +FD ++ D
Sbjct: 305 RIEVEQALAHPYLEQY---YDPSDEPIAEAPFKFDMELDD 341
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 117/340 (34%), Positives = 172/340 (50%), Gaps = 29/340 (8%)
Query: 119 EAIQGWVPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAR 178
E ++G V + L IG+G Y V A D K VA+KK+ + R + R
Sbjct: 14 EMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL-R 72
Query: 179 EIHILRRLDHINVIKLEGLV---TSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKC 235
EI IL R H N+I + ++ T +Y+V + ME DL L L S +
Sbjct: 73 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHL--SNDHICY 130
Query: 236 YMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQP--LTSRV 293
++ Q+L GL + HS VLHRD+K SNLL++ LKI DFGLA DPD + LT V
Sbjct: 131 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 190
Query: 294 VTLWYRPPELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPS 353
T WYR PE++L + Y ++D+WS GCILAE+ + +PI PG+ ++QL+ I + GSPS
Sbjct: 191 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 250
Query: 354 EDYWR-----KSK-----LPHATIFKPQQPYKRCVAETFKDFPAPALALMETLLSIDPAD 403
++ K++ LPH K + P+ R F + + AL L++ +L+ +P
Sbjct: 251 QEDLNCIINLKARNYLLSLPH----KNKVPWNR----LFPNADSKALDLLDKMLTFNPHK 302
Query: 404 RGSAASALRSEFFTMKPLPCDPSSLPKYPPSKEFDAKIRD 443
R AL + DPS P +FD ++ D
Sbjct: 303 RIEVEQALAHPYLEQY---YDPSDEPIAEAPFKFDMELDD 339
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 117/340 (34%), Positives = 172/340 (50%), Gaps = 29/340 (8%)
Query: 119 EAIQGWVPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAR 178
E ++G V + L IG+G Y V A D K VA+KK+ + R + R
Sbjct: 12 EMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL-R 70
Query: 179 EIHILRRLDHINVIKLEGLV---TSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKC 235
EI IL R H N+I + ++ T +Y+V + ME DL L L S +
Sbjct: 71 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHL--SNDHICY 128
Query: 236 YMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQP--LTSRV 293
++ Q+L GL + HS VLHRD+K SNLL++ LKI DFGLA DPD + LT V
Sbjct: 129 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 188
Query: 294 VTLWYRPPELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPS 353
T WYR PE++L + Y ++D+WS GCILAE+ + +PI PG+ ++QL+ I + GSPS
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 248
Query: 354 EDYWR-----KSK-----LPHATIFKPQQPYKRCVAETFKDFPAPALALMETLLSIDPAD 403
++ K++ LPH K + P+ R F + + AL L++ +L+ +P
Sbjct: 249 QEDLNCIINLKARNYLLSLPH----KNKVPWNR----LFPNADSKALDLLDKMLTFNPHK 300
Query: 404 RGSAASALRSEFFTMKPLPCDPSSLPKYPPSKEFDAKIRD 443
R AL + DPS P +FD ++ D
Sbjct: 301 RIEVEQALAHPYLEQY---YDPSDEPIAEAPFKFDMELDD 337
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 163 bits (413), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 117/340 (34%), Positives = 172/340 (50%), Gaps = 29/340 (8%)
Query: 119 EAIQGWVPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAR 178
E ++G V + L IG+G Y V A D K VA+KK+ + R + R
Sbjct: 17 EMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL-R 75
Query: 179 EIHILRRLDHINVIKLEGLV---TSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKC 235
EI IL R H N+I + ++ T +Y+V + ME DL L L S +
Sbjct: 76 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHL--SNDHICY 133
Query: 236 YMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQP--LTSRV 293
++ Q+L GL + HS VLHRD+K SNLL++ LKI DFGLA DPD + LT V
Sbjct: 134 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 193
Query: 294 VTLWYRPPELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPS 353
T WYR PE++L + Y ++D+WS GCILAE+ + +PI PG+ ++QL+ I + GSPS
Sbjct: 194 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 253
Query: 354 EDYWR-----KSK-----LPHATIFKPQQPYKRCVAETFKDFPAPALALMETLLSIDPAD 403
++ K++ LPH K + P+ R F + + AL L++ +L+ +P
Sbjct: 254 QEDLNCIINLKARNYLLSLPH----KNKVPWNR----LFPNADSKALDLLDKMLTFNPHK 305
Query: 404 RGSAASALRSEFFTMKPLPCDPSSLPKYPPSKEFDAKIRD 443
R AL + DPS P +FD ++ D
Sbjct: 306 RIEVEQALAHPYLEQY---YDPSDEPIAEAPFKFDMELDD 342
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 163 bits (413), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 117/340 (34%), Positives = 172/340 (50%), Gaps = 29/340 (8%)
Query: 119 EAIQGWVPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAR 178
E ++G V + L IG+G Y V A D K VA+KK+ + R + R
Sbjct: 18 EMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL-R 76
Query: 179 EIHILRRLDHINVIKLEGLV---TSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKC 235
EI IL R H N+I + ++ T +Y+V + ME DL L L S +
Sbjct: 77 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHL--SNDHICY 134
Query: 236 YMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQP--LTSRV 293
++ Q+L GL + HS VLHRD+K SNLL++ LKI DFGLA DPD + LT V
Sbjct: 135 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 194
Query: 294 VTLWYRPPELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPS 353
T WYR PE++L + Y ++D+WS GCILAE+ + +PI PG+ ++QL+ I + GSPS
Sbjct: 195 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 254
Query: 354 EDYWR-----KSK-----LPHATIFKPQQPYKRCVAETFKDFPAPALALMETLLSIDPAD 403
++ K++ LPH K + P+ R F + + AL L++ +L+ +P
Sbjct: 255 QEDLNCIINLKARNYLLSLPH----KNKVPWNR----LFPNADSKALDLLDKMLTFNPHK 306
Query: 404 RGSAASALRSEFFTMKPLPCDPSSLPKYPPSKEFDAKIRD 443
R AL + DPS P +FD ++ D
Sbjct: 307 RIEVEQALAHPYLEQY---YDPSDEPIAEAPFKFDMELDD 343
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 163 bits (413), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 117/340 (34%), Positives = 172/340 (50%), Gaps = 29/340 (8%)
Query: 119 EAIQGWVPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAR 178
E ++G V + L IG+G Y V A D K VA+KK+ + R + R
Sbjct: 9 EMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL-R 67
Query: 179 EIHILRRLDHINVIKLEGLV---TSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKC 235
EI IL R H N+I + ++ T +Y+V + ME DL L L S +
Sbjct: 68 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHL--SNDHICY 125
Query: 236 YMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQP--LTSRV 293
++ Q+L GL + HS VLHRD+K SNLL++ LKI DFGLA DPD + LT V
Sbjct: 126 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 185
Query: 294 VTLWYRPPELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPS 353
T WYR PE++L + Y ++D+WS GCILAE+ + +PI PG+ ++QL+ I + GSPS
Sbjct: 186 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 245
Query: 354 EDYWR-----KSK-----LPHATIFKPQQPYKRCVAETFKDFPAPALALMETLLSIDPAD 403
++ K++ LPH K + P+ R F + + AL L++ +L+ +P
Sbjct: 246 QEDLNCIINLKARNYLLSLPH----KNKVPWNR----LFPNADSKALDLLDKMLTFNPHK 297
Query: 404 RGSAASALRSEFFTMKPLPCDPSSLPKYPPSKEFDAKIRD 443
R AL + DPS P +FD ++ D
Sbjct: 298 RIEVEQALAHPYLEQY---YDPSDEPIAEAPFKFDMELDD 334
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 163 bits (413), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 117/340 (34%), Positives = 172/340 (50%), Gaps = 29/340 (8%)
Query: 119 EAIQGWVPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAR 178
E ++G V + L IG+G Y V A D K VA+KK+ + R + R
Sbjct: 16 EMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL-R 74
Query: 179 EIHILRRLDHINVIKLEGLV---TSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKC 235
EI IL R H N+I + ++ T +Y+V + ME DL L L S +
Sbjct: 75 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHL--SNDHICY 132
Query: 236 YMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQP--LTSRV 293
++ Q+L GL + HS VLHRD+K SNLL++ LKI DFGLA DPD + LT V
Sbjct: 133 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 192
Query: 294 VTLWYRPPELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPS 353
T WYR PE++L + Y ++D+WS GCILAE+ + +PI PG+ ++QL+ I + GSPS
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 252
Query: 354 EDYWR-----KSK-----LPHATIFKPQQPYKRCVAETFKDFPAPALALMETLLSIDPAD 403
++ K++ LPH K + P+ R F + + AL L++ +L+ +P
Sbjct: 253 QEDLNCIINLKARNYLLSLPH----KNKVPWNR----LFPNADSKALDLLDKMLTFNPHK 304
Query: 404 RGSAASALRSEFFTMKPLPCDPSSLPKYPPSKEFDAKIRD 443
R AL + DPS P +FD ++ D
Sbjct: 305 RIEVEQALAHPYLEQY---YDPSDEPIAEAPFKFDMELDD 341
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 163 bits (413), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 106/299 (35%), Positives = 159/299 (53%), Gaps = 26/299 (8%)
Query: 131 SFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHIN 190
S+ IG G++ VY+A+ D ++VA+KKV + F RE+ I+R+LDH N
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL------QGKAFKNRELQIMRKLDHCN 74
Query: 191 VIKLEGLVTS----RMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQ-------VKCYMQQ 239
+++L S + L LV +Y+ + +A H +S A+ VK YM Q
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH----YSRAKQTLPVIYVKLYMYQ 130
Query: 240 LLCGLDHCHSRGVLHRDIKGSNLLID-NNGILKIADFGLASFYDPDQNQPLTSRVVTLWY 298
L L + HS G+ HRDIK NLL+D + +LK+ DFG A + +P S + + +Y
Sbjct: 131 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVSYICSRYY 188
Query: 299 RPPELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWR 358
R PEL+ GAT Y +++D+WS GC+LAEL G+PI PG + V+QL +I K+ G+P+ + R
Sbjct: 189 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIR 248
Query: 359 KSKLPHATIFKPQQPYKRCVAETFKD-FPAPALALMETLLSIDPADRGSAASALRSEFF 416
+ P+ T F Q + F+ P A+AL LL P R + A FF
Sbjct: 249 EMN-PNYTEFAFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 306
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 163 bits (412), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 117/340 (34%), Positives = 172/340 (50%), Gaps = 29/340 (8%)
Query: 119 EAIQGWVPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAR 178
E ++G V + L IG+G Y V A D K VA+KK+ + R + R
Sbjct: 10 EMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL-R 68
Query: 179 EIHILRRLDHINVIKLEGLV---TSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKC 235
EI IL R H N+I + ++ T +Y+V + ME DL L L S +
Sbjct: 69 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHL--SNDHICY 126
Query: 236 YMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQP--LTSRV 293
++ Q+L GL + HS VLHRD+K SNLL++ LKI DFGLA DPD + LT V
Sbjct: 127 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 186
Query: 294 VTLWYRPPELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPS 353
T WYR PE++L + Y ++D+WS GCILAE+ + +PI PG+ ++QL+ I + GSPS
Sbjct: 187 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 246
Query: 354 EDYWR-----KSK-----LPHATIFKPQQPYKRCVAETFKDFPAPALALMETLLSIDPAD 403
++ K++ LPH K + P+ R F + + AL L++ +L+ +P
Sbjct: 247 QEDLNCIINLKARNYLLSLPH----KNKVPWNR----LFPNADSKALDLLDKMLTFNPHK 298
Query: 404 RGSAASALRSEFFTMKPLPCDPSSLPKYPPSKEFDAKIRD 443
R AL + DPS P +FD ++ D
Sbjct: 299 RIEVEQALAHPYLEQY---YDPSDEPIAEAPFKFDMELDD 335
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 163 bits (412), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 106/299 (35%), Positives = 159/299 (53%), Gaps = 26/299 (8%)
Query: 131 SFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHIN 190
S+ IG G++ VY+A+ D ++VA+KKV + F RE+ I+R+LDH N
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL------QGKAFKNRELQIMRKLDHCN 74
Query: 191 VIKLEGLVTS----RMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQ-------VKCYMQQ 239
+++L S + L LV +Y+ + +A H +S A+ VK YM Q
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARH----YSRAKQTLPVIYVKLYMYQ 130
Query: 240 LLCGLDHCHSRGVLHRDIKGSNLLID-NNGILKIADFGLASFYDPDQNQPLTSRVVTLWY 298
L L + HS G+ HRDIK NLL+D + +LK+ DFG A + +P S + + +Y
Sbjct: 131 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVSXICSRYY 188
Query: 299 RPPELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWR 358
R PEL+ GAT Y +++D+WS GC+LAEL G+PI PG + V+QL +I K+ G+P+ + R
Sbjct: 189 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIR 248
Query: 359 KSKLPHATIFKPQQPYKRCVAETFKD-FPAPALALMETLLSIDPADRGSAASALRSEFF 416
+ P+ T F Q + F+ P A+AL LL P R + A FF
Sbjct: 249 EMN-PNYTEFAFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 306
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 163 bits (412), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 117/340 (34%), Positives = 172/340 (50%), Gaps = 29/340 (8%)
Query: 119 EAIQGWVPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAR 178
E ++G V + L IG+G Y V A D K VA+KK+ + R + R
Sbjct: 16 EMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL-R 74
Query: 179 EIHILRRLDHINVIKLEGLV---TSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKC 235
EI IL R H N+I + ++ T +Y+V + ME DL L L S +
Sbjct: 75 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHL--SNDHICY 132
Query: 236 YMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQP--LTSRV 293
++ Q+L GL + HS VLHRD+K SNLL++ LKI DFGLA DPD + LT V
Sbjct: 133 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 192
Query: 294 VTLWYRPPELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPS 353
T WYR PE++L + Y ++D+WS GCILAE+ + +PI PG+ ++QL+ I + GSPS
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 252
Query: 354 EDYWR-----KSK-----LPHATIFKPQQPYKRCVAETFKDFPAPALALMETLLSIDPAD 403
++ K++ LPH K + P+ R F + + AL L++ +L+ +P
Sbjct: 253 QEDLNCIINLKARNYLLSLPH----KNKVPWNR----LFPNADSKALDLLDKMLTFNPHK 304
Query: 404 RGSAASALRSEFFTMKPLPCDPSSLPKYPPSKEFDAKIRD 443
R AL + DPS P +FD ++ D
Sbjct: 305 RIEVEQALAHPYLEQY---YDPSDEPIAEAPFKFDMELDD 341
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 162 bits (411), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 113/332 (34%), Positives = 166/332 (50%), Gaps = 13/332 (3%)
Query: 119 EAIQGWVPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAR 178
E ++G V + L IG+G Y V A D K VA+KK+ + R + R
Sbjct: 14 EMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL-R 72
Query: 179 EIHILRRLDHINVIKLEGLV---TSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKC 235
EI IL H N+I + ++ T +Y+V + ME DL L L S +
Sbjct: 73 EIKILLAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHL--SNDHICY 130
Query: 236 YMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQP--LTSRV 293
++ Q+L GL + HS VLHRD+K SNLL++ LKI DFGLA DPD + LT V
Sbjct: 131 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYV 190
Query: 294 VTLWYRPPELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPS 353
T WYR PE++L + Y ++D+WS GCILAE+ + +PI PG+ ++QL+ I + GSPS
Sbjct: 191 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 250
Query: 354 EDYWRKSKLPHATIFKPQQPYKRCV--AETFKDFPAPALALMETLLSIDPADRGSAASAL 411
++ A + P+K V F + + AL L++ +L+ +P R AL
Sbjct: 251 QEDLNCGINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 310
Query: 412 RSEFFTMKPLPCDPSSLPKYPPSKEFDAKIRD 443
+ DPS P +FD ++ D
Sbjct: 311 AHPYLAQY---YDPSDEPIAEAPFKFDMELDD 339
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 162 bits (411), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 116/340 (34%), Positives = 172/340 (50%), Gaps = 29/340 (8%)
Query: 119 EAIQGWVPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAR 178
E ++G V + L IG+G Y V A D K VA++K+ + R + R
Sbjct: 16 EMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTL-R 74
Query: 179 EIHILRRLDHINVIKLEGLV---TSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKC 235
EI IL R H N+I + ++ T +Y+V + ME DL L L S +
Sbjct: 75 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHL--SNDHICY 132
Query: 236 YMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQP--LTSRV 293
++ Q+L GL + HS VLHRD+K SNLL++ LKI DFGLA DPD + LT V
Sbjct: 133 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 192
Query: 294 VTLWYRPPELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPS 353
T WYR PE++L + Y ++D+WS GCILAE+ + +PI PG+ ++QL+ I + GSPS
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 252
Query: 354 EDYWR-----KSK-----LPHATIFKPQQPYKRCVAETFKDFPAPALALMETLLSIDPAD 403
++ K++ LPH K + P+ R F + + AL L++ +L+ +P
Sbjct: 253 QEDLNCIINLKARNYLLSLPH----KNKVPWNR----LFPNADSKALDLLDKMLTFNPHK 304
Query: 404 RGSAASALRSEFFTMKPLPCDPSSLPKYPPSKEFDAKIRD 443
R AL + DPS P +FD ++ D
Sbjct: 305 RIEVEQALAHPYLEQY---YDPSDEPIAEAPFKFDMELDD 341
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 162 bits (409), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 117/340 (34%), Positives = 170/340 (50%), Gaps = 29/340 (8%)
Query: 119 EAIQGWVPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAR 178
E ++G V + L IG+G Y V A D K VA+KK+ + R + R
Sbjct: 32 EMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL-R 90
Query: 179 EIHILRRLDHINVIKLEGLV---TSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKC 235
EI IL R H N+I + ++ T +YLV M DL L L S +
Sbjct: 91 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHL--SNDHICY 148
Query: 236 YMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQP--LTSRV 293
++ Q+L GL + HS VLHRD+K SNLL++ LKI DFGLA DPD + LT V
Sbjct: 149 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYV 208
Query: 294 VTLWYRPPELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPS 353
T WYR PE++L + Y ++D+WS GCILAE+ + +PI PG+ ++QL+ I + GSPS
Sbjct: 209 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 268
Query: 354 EDYWR-----KSK-----LPHATIFKPQQPYKRCVAETFKDFPAPALALMETLLSIDPAD 403
++ K++ LPH K + P+ R F + + AL L++ +L+ +P
Sbjct: 269 QEDLNCIINLKARNYLLSLPH----KNKVPWNRL----FPNADSKALDLLDKMLTFNPHK 320
Query: 404 RGSAASALRSEFFTMKPLPCDPSSLPKYPPSKEFDAKIRD 443
R AL + DPS P +FD ++ D
Sbjct: 321 RIEVEQALAHPYLEQY---YDPSDEPIAEAPFKFDMELDD 357
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 162 bits (409), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 116/340 (34%), Positives = 171/340 (50%), Gaps = 29/340 (8%)
Query: 119 EAIQGWVPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAR 178
E ++G V + L IG+G Y V A D K VA+KK+ + R + R
Sbjct: 10 EMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL-R 68
Query: 179 EIHILRRLDHINVIKLEGLV---TSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKC 235
EI IL R H N+I + ++ T +Y+V + ME DL L L S +
Sbjct: 69 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHL--SNDHICY 126
Query: 236 YMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQP--LTSRV 293
++ Q+L GL + HS VLHRD+K SNLL++ LKI DFGLA DPD + LT V
Sbjct: 127 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 186
Query: 294 VTLWYRPPELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPS 353
T WYR PE++L + Y ++D+WS GCILAE+ + +PI PG+ ++QL+ I + GSP
Sbjct: 187 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPE 246
Query: 354 EDYWR-----KSK-----LPHATIFKPQQPYKRCVAETFKDFPAPALALMETLLSIDPAD 403
++ K++ LPH K + P+ R F + + AL L++ +L+ +P
Sbjct: 247 QEDLNCIINLKARNYLLSLPH----KNKVPWNR----LFPNADSKALDLLDKMLTFNPHK 298
Query: 404 RGSAASALRSEFFTMKPLPCDPSSLPKYPPSKEFDAKIRD 443
R AL + DPS P +FD ++ D
Sbjct: 299 RIEVEQALAHPYLEQY---YDPSDEPIAEAPFKFDMELDD 335
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 161 bits (408), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 116/340 (34%), Positives = 171/340 (50%), Gaps = 29/340 (8%)
Query: 119 EAIQGWVPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAR 178
E ++G V + L IG+G Y V A D K VA+KK+ + R + R
Sbjct: 16 EMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL-R 74
Query: 179 EIHILRRLDHINVIKLEGLV---TSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKC 235
EI IL R H N+I + ++ T +Y+V + ME DL L L S +
Sbjct: 75 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHL--SNDHICY 132
Query: 236 YMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQP--LTSRV 293
++ Q+L GL + HS VLHRD+K SNLL++ LKI DFGLA DPD + L V
Sbjct: 133 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXV 192
Query: 294 VTLWYRPPELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPS 353
T WYR PE++L + Y ++D+WS GCILAE+ + +PI PG+ ++QL+ I + GSPS
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 252
Query: 354 EDYWR-----KSK-----LPHATIFKPQQPYKRCVAETFKDFPAPALALMETLLSIDPAD 403
++ K++ LPH K + P+ R F + + AL L++ +L+ +P
Sbjct: 253 QEDLNCIINLKARNYLLSLPH----KNKVPWNR----LFPNADSKALDLLDKMLTFNPHK 304
Query: 404 RGSAASALRSEFFTMKPLPCDPSSLPKYPPSKEFDAKIRD 443
R AL + DPS P +FD ++ D
Sbjct: 305 RIEVEQALAHPYLEQY---YDPSDEPIAEAPFKFDMELDD 341
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 161 bits (408), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 116/340 (34%), Positives = 171/340 (50%), Gaps = 29/340 (8%)
Query: 119 EAIQGWVPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAR 178
E ++G V + L IG+G Y V A D K VA+KK+ + R + R
Sbjct: 17 EMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL-R 75
Query: 179 EIHILRRLDHINVIKLEGLV---TSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKC 235
EI IL R H N+I + ++ T +Y+V + ME DL L L S +
Sbjct: 76 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHL--SNDHICY 133
Query: 236 YMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQP--LTSRV 293
++ Q+L GL + HS VLHRD+K SNLL++ LKI DFGLA DPD + L V
Sbjct: 134 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXV 193
Query: 294 VTLWYRPPELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPS 353
T WYR PE++L + Y ++D+WS GCILAE+ + +PI PG+ ++QL+ I + GSPS
Sbjct: 194 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 253
Query: 354 EDYWR-----KSK-----LPHATIFKPQQPYKRCVAETFKDFPAPALALMETLLSIDPAD 403
++ K++ LPH K + P+ R F + + AL L++ +L+ +P
Sbjct: 254 QEDLNCIINLKARNYLLSLPH----KNKVPWNR----LFPNADSKALDLLDKMLTFNPHK 305
Query: 404 RGSAASALRSEFFTMKPLPCDPSSLPKYPPSKEFDAKIRD 443
R AL + DPS P +FD ++ D
Sbjct: 306 RIEVEQALAHPYLEQY---YDPSDEPIAEAPFKFDMELDD 342
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 110/301 (36%), Positives = 158/301 (52%), Gaps = 12/301 (3%)
Query: 132 FEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINV 191
+ +L IG+G Y V A D +K VA+KK+ + R + REI IL R H NV
Sbjct: 45 YTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTL-REIQILLRFRHENV 103
Query: 192 IKLEGLV---TSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCH 248
I + ++ T +Y+V + ME DL L L S + ++ Q+L GL + H
Sbjct: 104 IGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQL--SNDHICYFLYQILRGLKYIH 161
Query: 249 SRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQP--LTSRVVTLWYRPPELLLG 306
S VLHRD+K SNLLI+ LKI DFGLA DP+ + LT V T WYR PE++L
Sbjct: 162 SANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIMLN 221
Query: 307 ATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSKLPHAT 366
+ Y ++D+WS GCILAE+ + +PI PG+ ++QL+ I + GSPS++ A
Sbjct: 222 SKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINMKAR 281
Query: 367 IFKPQQPYKRCVAETFKDFP---APALALMETLLSIDPADRGSAASALRSEFFTMKPLPC 423
+ P K VA K FP + AL L++ +L+ +P R + AL + P
Sbjct: 282 NYLQSLPSKTKVAWA-KLFPKSDSKALDLLDRMLTFNPNKRITVEEALAHPYLEQYYDPT 340
Query: 424 D 424
D
Sbjct: 341 D 341
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 116/340 (34%), Positives = 171/340 (50%), Gaps = 29/340 (8%)
Query: 119 EAIQGWVPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAR 178
E ++G V + L IG+G Y V A D K VA+KK+ + R + R
Sbjct: 14 EMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL-R 72
Query: 179 EIHILRRLDHINVIKLEGLV---TSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKC 235
EI IL H N+I + ++ T +Y+V + ME DL L L S +
Sbjct: 73 EIKILLAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHL--SNDHICY 130
Query: 236 YMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQP--LTSRV 293
++ Q+L GL + HS VLHRD+K SNLL++ LKI DFGLA DPD + LT V
Sbjct: 131 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 190
Query: 294 VTLWYRPPELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPS 353
T WYR PE++L + Y ++D+WS GCILAE+ + +PI PG+ ++QL+ I + GSPS
Sbjct: 191 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 250
Query: 354 EDYWR-----KSK-----LPHATIFKPQQPYKRCVAETFKDFPAPALALMETLLSIDPAD 403
++ K++ LPH K + P+ R F + + AL L++ +L+ +P
Sbjct: 251 QEDLNCIINLKARNYLLSLPH----KNKVPWNR----LFPNADSKALDLLDKMLTFNPHK 302
Query: 404 RGSAASALRSEFFTMKPLPCDPSSLPKYPPSKEFDAKIRD 443
R AL + DPS P +FD ++ D
Sbjct: 303 RIEVEQALAHPYLAQY---YDPSDEPIAEAPFKFDMELDD 339
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 113/333 (33%), Positives = 170/333 (51%), Gaps = 21/333 (6%)
Query: 125 VPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILR 184
VP+R + L +G G Y +V A D ++ VA+KK+ R RE+ +L+
Sbjct: 26 VPQR---LQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLK 82
Query: 185 RLDHINVIKLEGLVTSRMSCS----LYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQL 240
L H NVI L + T S +YLV M DL + L S+ V+ + QL
Sbjct: 83 HLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQAL--SDEHVQFLVYQL 140
Query: 241 LCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRP 300
L GL + HS G++HRD+K SN+ ++ + L+I DFGLA D + +T V T WYR
Sbjct: 141 LRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLARQAD----EEMTGYVATRWYRA 196
Query: 301 PELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKS 360
PE++L +Y VD+WS GCI+AEL GK + PG ++QL +I ++ G+PS + K
Sbjct: 197 PEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKI 256
Query: 361 KLPHATIF---KPQQPYKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALRSEFFT 417
HA + P P ++ ++ F+ A+ L+ +L +D R SAA AL +F+
Sbjct: 257 SSEHARTYIQSLPPMP-QKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFS 315
Query: 418 MKPLPCDPSSLPKYPPSKE-FDAKIRDEEARRQ 449
DP P+ P E +AK R E ++
Sbjct: 316 QY---HDPEDEPEAEPYDESVEAKERTLEEWKE 345
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 102/286 (35%), Positives = 152/286 (53%), Gaps = 15/286 (5%)
Query: 138 IGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINVIKLEGL 197
+G G Y +V A D + VA+KK+ + RE+ +L+ + H NVI L +
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 91
Query: 198 VTSRMSC----SLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVL 253
T S YLV +M+ DL + GLKFSE +++ + Q+L GL + HS GV+
Sbjct: 92 FTPASSLRNFYDFYLVMPFMQTDLQKIM---GLKFSEEKIQYLVYQMLKGLKYIHSAGVV 148
Query: 254 HRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGATYYGTA 313
HRD+K NL ++ + LKI DFGLA D + +T VVT WYR PE++L +Y
Sbjct: 149 HRDLKPGNLAVNEDCELKILDFGLARHADAE----MTGYVVTRWYRAPEVILSWMHYNQT 204
Query: 314 VDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSKLPHATIF---KP 370
VD+WS GCI+AE+ GK + G+ ++QL +I K+ G P ++ +K A + P
Sbjct: 205 VDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLP 264
Query: 371 QQPYKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALRSEFF 416
Q P ++ + F A L+E +L +D R +AA AL FF
Sbjct: 265 QTP-RKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFF 309
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 160 bits (405), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 114/324 (35%), Positives = 168/324 (51%), Gaps = 46/324 (14%)
Query: 137 KIGQGTYSNVYRARDLDQKKI--VALKKVRFDNLEPESVRFMAREIHILRRLDHINVIKL 194
K+G+GTY +VY+A+ D K ALK++ + + REI +LR L H NVI L
Sbjct: 28 KVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSA----CREIALLRELKHPNVISL 83
Query: 195 EGLVTSRMSCSLYLVFEYMEHDL--------AGLASHPGLKFSEAQVKCYMQQLLCGLDH 246
+ + S ++L+F+Y EHDL A A+ ++ VK + Q+L G+ +
Sbjct: 84 QKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHY 143
Query: 247 CHSRGVLHRDIKGSNLLI----DNNGILKIADFGLASFYDPDQNQPLTSR------VVTL 296
H+ VLHRD+K +N+L+ G +KIAD G A + N PL VVT
Sbjct: 144 LHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLF----NSPLKPLADLDPVVVTF 199
Query: 297 WYRPPELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTE---------VEQLHKIFK 347
WYR PELLLGA +Y A+D+W+ GCI AEL +PI R E +QL +IF
Sbjct: 200 WYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFN 259
Query: 348 LCGSPSEDYWRK-SKLP-HATIFKP--QQPYKRC----VAETFKDFP-APALALMETLLS 398
+ G P++ W K+P H+T+ K + Y C E K P + A L++ LL+
Sbjct: 260 VMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLT 319
Query: 399 IDPADRGSAASALRSEFFTMKPLP 422
+DP R ++ A++ +F PLP
Sbjct: 320 MDPIKRITSEQAMQDPYFLEDPLP 343
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 114/333 (34%), Positives = 169/333 (50%), Gaps = 21/333 (6%)
Query: 125 VPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILR 184
VP+R + L +G G Y +V A D ++ VA+KK+ R RE+ +L+
Sbjct: 26 VPQR---LQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLK 82
Query: 185 RLDHINVIKLEGLVTSRMSCS----LYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQL 240
L H NVI L + T S +YLV M DL + L S+ V+ + QL
Sbjct: 83 HLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQAL--SDEHVQFLVYQL 140
Query: 241 LCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRP 300
L GL + HS G++HRD+K SN+ ++ + L+I DFGLA D + +T V T WYR
Sbjct: 141 LRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLARQAD----EEMTGYVATRWYRA 196
Query: 301 PELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKS 360
PE++L +Y VD+WS GCI+AEL GK + PG ++QL +I ++ G+PS + K
Sbjct: 197 PEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKI 256
Query: 361 KLPHATIF---KPQQPYKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALRSEFFT 417
HA + P P K ++ F+ A+ L+ +L +D R SAA AL +F+
Sbjct: 257 SSEHARTYIQSLPPMPQKD-LSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFS 315
Query: 418 MKPLPCDPSSLPKYPPSKE-FDAKIRDEEARRQ 449
DP P+ P E +AK R E ++
Sbjct: 316 QYH---DPEDEPEAEPYDESVEAKERTLEEWKE 345
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 95/294 (32%), Positives = 154/294 (52%), Gaps = 11/294 (3%)
Query: 130 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHI 189
+ +E L +G+G+Y V + R+ D +IVA+KK + + + REI +L++L H
Sbjct: 25 EKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHE 84
Query: 190 NVIKLEGLVTSRMSCSLYLVFEYMEHD-LAGLASHP-GLKFSEAQVKCYMQQLLCGLDHC 247
N++ L L + YLVFE+++H L L P GL + Q Y+ Q++ G+ C
Sbjct: 85 NLVNL--LEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQK--YLFQIINGIGFC 140
Query: 248 HSRGVLHRDIKGSNLLIDNNGILKIADFGLA-SFYDPDQNQPLTSRVVTLWYRPPELLLG 306
HS ++HRDIK N+L+ +G++K+ DFG A + P + V T WYR PELL+G
Sbjct: 141 HSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAP--GEVYDDEVATRWYRAPELLVG 198
Query: 307 ATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGS--PSEDYWRKSKLPH 364
YG AVD+W+ GC++ E++ G+P+ PG ++++QL+ I G+ P
Sbjct: 199 DVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVF 258
Query: 365 ATIFKPQQPYKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALRSEFFTM 418
A + P+ + + + + L + L IDP R A L +FF M
Sbjct: 259 AGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQM 312
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 108/314 (34%), Positives = 165/314 (52%), Gaps = 30/314 (9%)
Query: 132 FEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINV 191
+ L +G G V+ A D D K VA+KK+ +P+SV+ REI I+RRLDH N+
Sbjct: 13 YMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLT--DPQSVKHALREIKIIRRLDHDNI 70
Query: 192 IKLEGLVT---SRMS---------CSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQ 239
+K+ ++ S+++ S+Y+V EYME DLA + L E + +M Q
Sbjct: 71 VKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGPLL--EEHARLFMYQ 128
Query: 240 LLCGLDHCHSRGVLHRDIKGSNLLIDN-NGILKIADFGLASFYDPDQNQP--LTSRVVTL 296
LL GL + HS VLHRD+K +NL I+ + +LKI DFGLA DP + L+ +VT
Sbjct: 129 LLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTK 188
Query: 297 WYRPPELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDY 356
WYR P LLL Y A+D+W+ GCI AE+ GK + G E+EQ+ I + E+
Sbjct: 189 WYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEED 248
Query: 357 WRKSKLPHATIF------KPQQPYKRCVAETFKDFPAPALALMETLLSIDPADRGSAASA 410
R+ L ++ +P +P + + ++ A+ +E +L+ P DR +A A
Sbjct: 249 -RQELLSVIPVYIRNDMTEPHKPLTQLLPGISRE----AVDFLEQILTFSPMDRLTAEEA 303
Query: 411 LRSEFFTMKPLPCD 424
L + ++ P D
Sbjct: 304 LSHPYMSIYSFPMD 317
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 158 bits (400), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 113/333 (33%), Positives = 169/333 (50%), Gaps = 21/333 (6%)
Query: 125 VPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILR 184
VP+R + L +G G Y +V A D ++ VA+KK+ R RE+ +L+
Sbjct: 18 VPQR---LQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLK 74
Query: 185 RLDHINVIKLEGLVTSRMSCS----LYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQL 240
L H NVI L + T S +YLV M DL + L S+ V+ + QL
Sbjct: 75 HLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQAL--SDEHVQFLVYQL 132
Query: 241 LCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRP 300
L GL + HS G++HRD+K SN+ ++ + L+I DFGLA ++ +T V T WYR
Sbjct: 133 LRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLAR----QADEEMTGYVATRWYRA 188
Query: 301 PELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKS 360
PE++L +Y VD+WS GCI+AEL GK + PG ++QL +I ++ G+PS + K
Sbjct: 189 PEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKI 248
Query: 361 KLPHATIF---KPQQPYKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALRSEFFT 417
HA + P P K ++ F+ A+ L+ +L +D R SAA AL +F+
Sbjct: 249 SSEHARTYIQSLPPMPQKD-LSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFS 307
Query: 418 MKPLPCDPSSLPKYPPSKE-FDAKIRDEEARRQ 449
DP P+ P E +AK R E ++
Sbjct: 308 QYH---DPEDEPEAEPYDESVEAKERTLEEWKE 337
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 110/327 (33%), Positives = 167/327 (51%), Gaps = 43/327 (13%)
Query: 132 FEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPES-VRFMAREIHILRRLD-HI 189
+E + K+G+G Y V+++ D ++VA+KK+ FD + + + REI IL L H
Sbjct: 11 YELVKKLGKGAYGIVWKSIDRRTGEVVAVKKI-FDAFQNSTDAQRTFREIMILTELSGHE 69
Query: 190 NVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHS 249
N++ L ++ + +YLVF+YME DL + L+ Q Y QL+ + + HS
Sbjct: 70 NIVNLLNVLRADNDRDVYLVFDYMETDLHAVIRANILEPVHKQYVVY--QLIKVIKYLHS 127
Query: 250 RGVLHRDIKGSNLLIDNNGILKIADFGLA-SFYDP------------------DQNQP-L 289
G+LHRD+K SN+L++ +K+ADFGL+ SF + D +QP L
Sbjct: 128 GGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPIL 187
Query: 290 TSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLC 349
T V T WYR PE+LLG+T Y +D+WS GCIL E+ GKPI PG + + QL +I +
Sbjct: 188 TDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERIIGVI 247
Query: 350 GSPSEDYWRKSKLPHATIF--------KPQQPYKRCVAETFK----------DFPAPALA 391
PS + + P A + +Q KR + +K D AL
Sbjct: 248 DFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALD 307
Query: 392 LMETLLSIDPADRGSAASALRSEFFTM 418
L++ LL +P R SA AL+ F ++
Sbjct: 308 LLDKLLQFNPNKRISANDALKHPFVSI 334
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 117/350 (33%), Positives = 173/350 (49%), Gaps = 37/350 (10%)
Query: 130 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKV--RFDNLEPESVRFMAREIHILRRLD 187
D +E ++ IG G Y V AR + VA+KK+ FD + + + RE+ IL+
Sbjct: 55 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVT--NAKRTLRELKILKHFK 112
Query: 188 HINVIKLEGLVTSRMSC----SLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCG 243
H N+I ++ ++ + S+Y+V + ME DL + H + V+ ++ QLL G
Sbjct: 113 HDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQII-HSSQPLTLEHVRYFLYQLLRG 171
Query: 244 LDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLAS--FYDPDQNQP-LTSRVVTLWYRP 300
L + HS V+HRD+K SNLL++ N LKI DFG+A P ++Q +T V T WYR
Sbjct: 172 LKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRA 231
Query: 301 PELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKS 360
PEL+L Y A+DLWS GCI E+ A + + PG+ V QL I + G+PS +
Sbjct: 232 PELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAV 291
Query: 361 KLPHATIFKPQQPYKRCVA-ETFKDFPAP---ALALMETLLSIDPADRGSAASALRSEFF 416
+ P ++ V ET +P AL+L+ +L +P+ R SAA+ALR F
Sbjct: 292 GAERVRAYIQSLPPRQPVPWETV--YPGADRQALSLLGRMLRFEPSARISAAAALRHPFL 349
Query: 417 TMKPLPCDPSSLPKYPPSKEFD----------------AKIRDEEARRQG 450
DP P P +F A+I D ARR+G
Sbjct: 350 AKY---HDPDDEPDCAPPFDFAFDREALTRERIKEAIVAEIEDFHARREG 396
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 100/286 (34%), Positives = 152/286 (53%), Gaps = 15/286 (5%)
Query: 138 IGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINVIKLEGL 197
+G G Y +V A D + VA+KK+ + RE+ +L+ + H NVI L +
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 109
Query: 198 VTSRMSC----SLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVL 253
T S YLV +M+ DL + G++FSE +++ + Q+L GL + HS GV+
Sbjct: 110 FTPASSLRNFYDFYLVMPFMQTDLQKIM---GMEFSEEKIQYLVYQMLKGLKYIHSAGVV 166
Query: 254 HRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGATYYGTA 313
HRD+K NL ++ + LKI DFGLA D + +T VVT WYR PE++L +Y
Sbjct: 167 HRDLKPGNLAVNEDCELKILDFGLARHADAE----MTGYVVTRWYRAPEVILSWMHYNQT 222
Query: 314 VDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSKLPHATIF---KP 370
VD+WS GCI+AE+ GK + G+ ++QL +I K+ G P ++ +K A + P
Sbjct: 223 VDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLP 282
Query: 371 QQPYKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALRSEFF 416
Q P ++ + F A L+E +L +D R +AA AL FF
Sbjct: 283 QTP-RKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFF 327
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 117/350 (33%), Positives = 173/350 (49%), Gaps = 37/350 (10%)
Query: 130 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKV--RFDNLEPESVRFMAREIHILRRLD 187
D +E ++ IG G Y V AR + VA+KK+ FD + + + RE+ IL+
Sbjct: 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVT--NAKRTLRELKILKHFK 111
Query: 188 HINVIKLEGLVTSRMSC----SLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCG 243
H N+I ++ ++ + S+Y+V + ME DL + H + V+ ++ QLL G
Sbjct: 112 HDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQII-HSSQPLTLEHVRYFLYQLLRG 170
Query: 244 LDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLAS--FYDPDQNQP-LTSRVVTLWYRP 300
L + HS V+HRD+K SNLL++ N LKI DFG+A P ++Q +T V T WYR
Sbjct: 171 LKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRA 230
Query: 301 PELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKS 360
PEL+L Y A+DLWS GCI E+ A + + PG+ V QL I + G+PS +
Sbjct: 231 PELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAV 290
Query: 361 KLPHATIFKPQQPYKRCVA-ETFKDFPAP---ALALMETLLSIDPADRGSAASALRSEFF 416
+ P ++ V ET +P AL+L+ +L +P+ R SAA+ALR F
Sbjct: 291 GAERVRAYIQSLPPRQPVPWETV--YPGADRQALSLLGRMLRFEPSARISAAAALRHPFL 348
Query: 417 TMKPLPCDPSSLPKYPPSKEFD----------------AKIRDEEARRQG 450
DP P P +F A+I D ARR+G
Sbjct: 349 AKY---HDPDDEPDCAPPFDFAFDREALTRERIKEAIVAEIEDFHARREG 395
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 105/300 (35%), Positives = 161/300 (53%), Gaps = 21/300 (7%)
Query: 127 RRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRL 186
+R ++ IG G++ V++A+ ++ + VA+KKV D RF RE+ I+R +
Sbjct: 37 QREIAYTNCKVIGNGSFGVVFQAKLVESDE-VAIKKVLQDK------RFKNRELQIMRIV 89
Query: 187 DHINVIKLEGLVTS----RMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQ----VKCYMQ 238
H NV+ L+ S + L LV EY+ + + H K + +K YM
Sbjct: 90 KHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYA-KLKQTMPMLLIKLYMY 148
Query: 239 QLLCGLDHCHSRGVLHRDIKGSNLLIDN-NGILKIADFGLASFYDPDQNQPLTSRVVTLW 297
QLL L + HS G+ HRDIK NLL+D +G+LK+ DFG A +P S + + +
Sbjct: 149 QLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILI--AGEPNVSXICSRY 206
Query: 298 YRPPELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYW 357
YR PEL+ GAT Y T +D+WSTGC++AEL G+P+ PG + ++QL +I K+ G+PS +
Sbjct: 207 YRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQI 266
Query: 358 RKSKLPHATIFKPQQPYKRCVAETFKD-FPAPALALMETLLSIDPADRGSAASALRSEFF 416
K+ P+ K Q ++ F+ P A+ L+ LL P+ R +A AL FF
Sbjct: 267 -KTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFF 325
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 153 bits (386), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 109/350 (31%), Positives = 171/350 (48%), Gaps = 26/350 (7%)
Query: 125 VPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILR 184
VP R ++ L +G G Y +V + D+ +A+KK+ + RE+ +L+
Sbjct: 49 VPER---YQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLK 105
Query: 185 RLDHINVIKLEGLVTSRMSCS----LYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQL 240
+ H NVI L + T S +YLV M DL + K ++ V+ + Q+
Sbjct: 106 HMKHENVIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQI 163
Query: 241 LCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRP 300
L GL + HS ++HRD+K SNL ++ + LKI DFGLA D + +T V T WYR
Sbjct: 164 LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRA 219
Query: 301 PELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKS 360
PE++L +Y VD+WS GCI+AEL G+ + PG + QL +I +L G+P +
Sbjct: 220 PEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLTGTPPASVISRM 279
Query: 361 KLPHATIF---KPQQPYKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALRSEFFT 417
A + PQ P KR A+ F A+ L+E +L +D R +A+ AL +F+
Sbjct: 280 PSHEARNYINSLPQMP-KRNFADVFIGANPLAVDLLEKMLVLDTDKRITASEALAHPYFS 338
Query: 418 MKPLPCDPSSLPKYPPSKEFDAKIRDEEARRQGGSKGQRMDLERRGTRES 467
P D P S+ +D E+R+ + +R+ E + E+
Sbjct: 339 QYHDPDDE------PESEPYDQSF---ESRQLEIEEWKRLTYEEVCSFET 379
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 152 bits (383), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 110/328 (33%), Positives = 159/328 (48%), Gaps = 16/328 (4%)
Query: 124 W-VPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHI 182
W VP R ++ L +G G Y +V A D VA+KK+ + RE+ +
Sbjct: 18 WEVPER---YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 183 LRRLDHINVIKLEGLVTSRMSC----SLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQ 238
L+ + H NVI L + T S +YLV M DL + K ++ V+ +
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIY 132
Query: 239 QLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWY 298
Q+L GL + HS ++HRD+K SNL ++ + LKI DFGLA D + +T V T WY
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWY 188
Query: 299 RPPELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWR 358
R PE++L A +Y VD+WS GCI+AEL G+ + PG ++QL I +L G+P + +
Sbjct: 189 RAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLK 248
Query: 359 K--SKLPHATIFKPQQPYKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALRSEFF 416
K S+ I Q K A F A+ L+E +L +D R +AA AL +F
Sbjct: 249 KISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
Query: 417 TMKPLPCDPSSLPKYPPSKEFDAKIRDE 444
P D Y S E + DE
Sbjct: 309 AQYHDPDDEPVADPYDQSFESRDLLIDE 336
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 108/326 (33%), Positives = 157/326 (48%), Gaps = 15/326 (4%)
Query: 125 VPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILR 184
VP R ++ L +G G Y +V A D VA+KK+ + RE+ +L+
Sbjct: 20 VPER---YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 185 RLDHINVIKLEGLVTSRMSC----SLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQL 240
+ H NVI L + T S +YLV M DL + K ++ V+ + Q+
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQ--KLTDDHVQFLIYQI 134
Query: 241 LCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRP 300
L GL + HS ++HRD+K SNL ++ + LKI DFGLA D + +T V T WYR
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE----MTGYVATRWYRA 190
Query: 301 PELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRK- 359
PE++L +Y VD+WS GCI+AEL G+ + PG ++QL I +L G+P + +K
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 250
Query: 360 -SKLPHATIFKPQQPYKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALRSEFFTM 418
S+ I Q K A F A+ L+E +L +D R +AA AL +F
Sbjct: 251 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
Query: 419 KPLPCDPSSLPKYPPSKEFDAKIRDE 444
P D Y S E + DE
Sbjct: 311 YHDPDDEPVADPYDQSFESRDLLIDE 336
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 108/326 (33%), Positives = 157/326 (48%), Gaps = 15/326 (4%)
Query: 125 VPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILR 184
VP R ++ L +G G Y +V A D VA+KK+ + RE+ +L+
Sbjct: 26 VPER---YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 82
Query: 185 RLDHINVIKLEGLVTSRMSC----SLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQL 240
+ H NVI L + T S +YLV M DL + K ++ V+ + Q+
Sbjct: 83 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 140
Query: 241 LCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRP 300
L GL + HS ++HRD+K SNL ++ + LKI DFGLA D + +T V T WYR
Sbjct: 141 LRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDE----MTGYVATRWYRA 196
Query: 301 PELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRK- 359
PE++L +Y VD+WS GCI+AEL G+ + PG ++QL I +L G+P + +K
Sbjct: 197 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 256
Query: 360 -SKLPHATIFKPQQPYKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALRSEFFTM 418
S+ I Q K A F A+ L+E +L +D R +AA AL +F
Sbjct: 257 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 316
Query: 419 KPLPCDPSSLPKYPPSKEFDAKIRDE 444
P D Y S E + DE
Sbjct: 317 YHDPDDEPVADPYDQSFESRDLLIDE 342
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 108/326 (33%), Positives = 157/326 (48%), Gaps = 15/326 (4%)
Query: 125 VPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILR 184
VP R ++ L +G G Y +V A D VA+KK+ + RE+ +L+
Sbjct: 22 VPER---YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 78
Query: 185 RLDHINVIKLEGLVTSRMSC----SLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQL 240
+ H NVI L + T S +YLV M DL + K ++ V+ + Q+
Sbjct: 79 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 136
Query: 241 LCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRP 300
L GL + HS ++HRD+K SNL ++ + LKI DFGLA D + +T V T WYR
Sbjct: 137 LRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDE----MTGYVATRWYRA 192
Query: 301 PELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRK- 359
PE++L +Y VD+WS GCI+AEL G+ + PG ++QL I +L G+P + +K
Sbjct: 193 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 252
Query: 360 -SKLPHATIFKPQQPYKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALRSEFFTM 418
S+ I Q K A F A+ L+E +L +D R +AA AL +F
Sbjct: 253 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 312
Query: 419 KPLPCDPSSLPKYPPSKEFDAKIRDE 444
P D Y S E + DE
Sbjct: 313 YHDPDDEPVADPYDQSFESRDLLIDE 338
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 109/326 (33%), Positives = 157/326 (48%), Gaps = 15/326 (4%)
Query: 125 VPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILR 184
VP R ++ L IG G Y +V A D VA+KK+ + RE+ +L+
Sbjct: 25 VPER---YQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 81
Query: 185 RLDHINVIKLEGLVTSRMSC----SLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQL 240
+ H NVI L + T S +YLV M DL + K ++ V+ + Q+
Sbjct: 82 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 139
Query: 241 LCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRP 300
L GL + HS ++HRD+K SNL ++ + LKI DFGLA D + +T V T WYR
Sbjct: 140 LRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE----MTGYVATRWYRA 195
Query: 301 PELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRK- 359
PE++L +Y VD+WS GCI+AEL G+ + PG ++QL I +L G+P + +K
Sbjct: 196 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 255
Query: 360 -SKLPHATIFKPQQPYKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALRSEFFTM 418
S+ I Q K A F A+ L+E +L +D R +AA AL +F
Sbjct: 256 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 315
Query: 419 KPLPCDPSSLPKYPPSKEFDAKIRDE 444
P D Y S E + DE
Sbjct: 316 YHDPDDEPVADPYDQSFESRDLLIDE 341
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 108/326 (33%), Positives = 157/326 (48%), Gaps = 15/326 (4%)
Query: 125 VPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILR 184
VP R ++ L +G G Y +V A D VA+KK+ + RE+ +L+
Sbjct: 26 VPER---YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLK 82
Query: 185 RLDHINVIKLEGLVTSRMSC----SLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQL 240
+ H NVI L + T S +YLV M DL + K ++ V+ + Q+
Sbjct: 83 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQI 140
Query: 241 LCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRP 300
L GL + HS ++HRD+K SNL ++ + LKI DFGLA D + +T V T WYR
Sbjct: 141 LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRA 196
Query: 301 PELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRK- 359
PE++L +Y VD+WS GCI+AEL G+ + PG ++QL I +L G+P + +K
Sbjct: 197 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 256
Query: 360 -SKLPHATIFKPQQPYKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALRSEFFTM 418
S+ I Q K A F A+ L+E +L +D R +AA AL +F
Sbjct: 257 SSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 316
Query: 419 KPLPCDPSSLPKYPPSKEFDAKIRDE 444
P D Y S E + DE
Sbjct: 317 YHDPDDEPVADPYDQSFESRDLLIDE 342
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 108/326 (33%), Positives = 157/326 (48%), Gaps = 15/326 (4%)
Query: 125 VPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILR 184
VP R ++ L +G G Y +V A D VA+KK+ + RE+ +L+
Sbjct: 39 VPER---YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLK 95
Query: 185 RLDHINVIKLEGLVTSRMSC----SLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQL 240
+ H NVI L + T S +YLV M DL + K ++ V+ + Q+
Sbjct: 96 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQI 153
Query: 241 LCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRP 300
L GL + HS ++HRD+K SNL ++ + LKI DFGLA D + +T V T WYR
Sbjct: 154 LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRA 209
Query: 301 PELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRK- 359
PE++L +Y VD+WS GCI+AEL G+ + PG ++QL I +L G+P + +K
Sbjct: 210 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 269
Query: 360 -SKLPHATIFKPQQPYKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALRSEFFTM 418
S+ I Q K A F A+ L+E +L +D R +AA AL +F
Sbjct: 270 SSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 329
Query: 419 KPLPCDPSSLPKYPPSKEFDAKIRDE 444
P D Y S E + DE
Sbjct: 330 YHDPDDEPVADPYDQSFESRDLLIDE 355
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 108/326 (33%), Positives = 157/326 (48%), Gaps = 15/326 (4%)
Query: 125 VPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILR 184
VP R ++ L +G G Y +V A D VA+KK+ + RE+ +L+
Sbjct: 40 VPER---YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLK 96
Query: 185 RLDHINVIKLEGLVTSRMSC----SLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQL 240
+ H NVI L + T S +YLV M DL + K ++ V+ + Q+
Sbjct: 97 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQI 154
Query: 241 LCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRP 300
L GL + HS ++HRD+K SNL ++ + LKI DFGLA D + +T V T WYR
Sbjct: 155 LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRA 210
Query: 301 PELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRK- 359
PE++L +Y VD+WS GCI+AEL G+ + PG ++QL I +L G+P + +K
Sbjct: 211 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 270
Query: 360 -SKLPHATIFKPQQPYKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALRSEFFTM 418
S+ I Q K A F A+ L+E +L +D R +AA AL +F
Sbjct: 271 SSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 330
Query: 419 KPLPCDPSSLPKYPPSKEFDAKIRDE 444
P D Y S E + DE
Sbjct: 331 YHDPDDEPVADPYDQSFESRDLLIDE 356
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 108/326 (33%), Positives = 157/326 (48%), Gaps = 15/326 (4%)
Query: 125 VPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILR 184
VP R ++ L +G G Y +V A D VA+KK+ + RE+ +L+
Sbjct: 31 VPER---YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 87
Query: 185 RLDHINVIKLEGLVTSRMSC----SLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQL 240
+ H NVI L + T S +YLV M DL + K ++ V+ + Q+
Sbjct: 88 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 145
Query: 241 LCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRP 300
L GL + HS ++HRD+K SNL ++ + LKI DFGLA D + +T V T WYR
Sbjct: 146 LRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE----MTGYVATRWYRA 201
Query: 301 PELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRK- 359
PE++L +Y VD+WS GCI+AEL G+ + PG ++QL I +L G+P + +K
Sbjct: 202 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 261
Query: 360 -SKLPHATIFKPQQPYKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALRSEFFTM 418
S+ I Q K A F A+ L+E +L +D R +AA AL +F
Sbjct: 262 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 321
Query: 419 KPLPCDPSSLPKYPPSKEFDAKIRDE 444
P D Y S E + DE
Sbjct: 322 YHDPDDEPVADPYDQSFESRDLLIDE 347
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 108/326 (33%), Positives = 157/326 (48%), Gaps = 15/326 (4%)
Query: 125 VPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILR 184
VP R ++ L +G G Y +V A D VA+KK+ + RE+ +L+
Sbjct: 20 VPER---YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 185 RLDHINVIKLEGLVTSRMSC----SLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQL 240
+ H NVI L + T S +YLV M DL + K ++ V+ + Q+
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQ--KLTDDHVQFLIYQI 134
Query: 241 LCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRP 300
L GL + HS ++HRD+K SNL ++ + LKI DFGLA D + +T V T WYR
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRA 190
Query: 301 PELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRK- 359
PE++L +Y VD+WS GCI+AEL G+ + PG ++QL I +L G+P + +K
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 250
Query: 360 -SKLPHATIFKPQQPYKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALRSEFFTM 418
S+ I Q K A F A+ L+E +L +D R +AA AL +F
Sbjct: 251 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
Query: 419 KPLPCDPSSLPKYPPSKEFDAKIRDE 444
P D Y S E + DE
Sbjct: 311 YHDPDDEPVADPYDQSFESRDLLIDE 336
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 108/326 (33%), Positives = 157/326 (48%), Gaps = 15/326 (4%)
Query: 125 VPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILR 184
VP R ++ L +G G Y +V A D VA+KK+ + RE+ +L+
Sbjct: 25 VPER---YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 81
Query: 185 RLDHINVIKLEGLVTSRMSC----SLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQL 240
+ H NVI L + T S +YLV M DL + K ++ V+ + Q+
Sbjct: 82 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 139
Query: 241 LCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRP 300
L GL + HS ++HRD+K SNL ++ + LKI DFGLA D + +T V T WYR
Sbjct: 140 LRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE----MTGYVATRWYRA 195
Query: 301 PELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRK- 359
PE++L +Y VD+WS GCI+AEL G+ + PG ++QL I +L G+P + +K
Sbjct: 196 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 255
Query: 360 -SKLPHATIFKPQQPYKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALRSEFFTM 418
S+ I Q K A F A+ L+E +L +D R +AA AL +F
Sbjct: 256 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 315
Query: 419 KPLPCDPSSLPKYPPSKEFDAKIRDE 444
P D Y S E + DE
Sbjct: 316 YHDPDDEPVADPYDQSFESRDLLIDE 341
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 108/326 (33%), Positives = 157/326 (48%), Gaps = 15/326 (4%)
Query: 125 VPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILR 184
VP R ++ L +G G Y +V A D VA+KK+ + RE+ +L+
Sbjct: 32 VPER---YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLK 88
Query: 185 RLDHINVIKLEGLVTSRMSC----SLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQL 240
+ H NVI L + T S +YLV M DL + K ++ V+ + Q+
Sbjct: 89 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 146
Query: 241 LCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRP 300
L GL + HS ++HRD+K SNL ++ + LKI DFGLA D + +T V T WYR
Sbjct: 147 LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRA 202
Query: 301 PELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRK- 359
PE++L +Y VD+WS GCI+AEL G+ + PG ++QL I +L G+P + +K
Sbjct: 203 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 262
Query: 360 -SKLPHATIFKPQQPYKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALRSEFFTM 418
S+ I Q K A F A+ L+E +L +D R +AA AL +F
Sbjct: 263 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 322
Query: 419 KPLPCDPSSLPKYPPSKEFDAKIRDE 444
P D Y S E + DE
Sbjct: 323 YHDPDDEPVADPYDQSFESRDLLIDE 348
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 108/326 (33%), Positives = 157/326 (48%), Gaps = 15/326 (4%)
Query: 125 VPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILR 184
VP R ++ L +G G Y +V A D VA+KK+ + RE+ +L+
Sbjct: 26 VPER---YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 82
Query: 185 RLDHINVIKLEGLVTSRMSC----SLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQL 240
+ H NVI L + T S +YLV M DL + K ++ V+ + Q+
Sbjct: 83 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQI 140
Query: 241 LCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRP 300
L GL + HS ++HRD+K SNL ++ + LKI DFGLA D + +T V T WYR
Sbjct: 141 LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRA 196
Query: 301 PELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRK- 359
PE++L +Y VD+WS GCI+AEL G+ + PG ++QL I +L G+P + +K
Sbjct: 197 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 256
Query: 360 -SKLPHATIFKPQQPYKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALRSEFFTM 418
S+ I Q K A F A+ L+E +L +D R +AA AL +F
Sbjct: 257 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 316
Query: 419 KPLPCDPSSLPKYPPSKEFDAKIRDE 444
P D Y S E + DE
Sbjct: 317 YHDPDDEPVADPYDQSFESRDLLIDE 342
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 107/326 (32%), Positives = 156/326 (47%), Gaps = 15/326 (4%)
Query: 125 VPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILR 184
VP R ++ L +G G Y +V A D VA+KK+ + RE+ +L+
Sbjct: 20 VPER---YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 185 RLDHINVIKLEGLVTSRMSC----SLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQL 240
+ H NVI L + T S +YLV M DL + K ++ V+ + Q+
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKSQ--KLTDDHVQFLIYQI 134
Query: 241 LCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRP 300
L GL + HS ++HRD+K SNL ++ + LKI DFGL D + +T V T WYR
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDE----MTGYVATRWYRA 190
Query: 301 PELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRK- 359
PE++L +Y VD+WS GCI+AEL G+ + PG ++QL I +L G+P + +K
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 250
Query: 360 -SKLPHATIFKPQQPYKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALRSEFFTM 418
S+ I Q K A F A+ L+E +L +D R +AA AL +F
Sbjct: 251 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
Query: 419 KPLPCDPSSLPKYPPSKEFDAKIRDE 444
P D Y S E + DE
Sbjct: 311 YHDPDDEPVADPYDQSLESRDLLIDE 336
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 108/326 (33%), Positives = 157/326 (48%), Gaps = 15/326 (4%)
Query: 125 VPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILR 184
VP R ++ L +G G Y +V A D VA+KK+ + RE+ +L+
Sbjct: 32 VPER---YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 88
Query: 185 RLDHINVIKLEGLVTSRMSC----SLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQL 240
+ H NVI L + T S +YLV M DL + K ++ V+ + Q+
Sbjct: 89 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 146
Query: 241 LCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRP 300
L GL + HS ++HRD+K SNL ++ + LKI DFGLA D + +T V T WYR
Sbjct: 147 LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRA 202
Query: 301 PELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRK- 359
PE++L +Y VD+WS GCI+AEL G+ + PG ++QL I +L G+P + +K
Sbjct: 203 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 262
Query: 360 -SKLPHATIFKPQQPYKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALRSEFFTM 418
S+ I Q K A F A+ L+E +L +D R +AA AL +F
Sbjct: 263 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 322
Query: 419 KPLPCDPSSLPKYPPSKEFDAKIRDE 444
P D Y S E + DE
Sbjct: 323 YHDPDDEPVADPYDQSFESRDLLIDE 348
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 108/326 (33%), Positives = 157/326 (48%), Gaps = 15/326 (4%)
Query: 125 VPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILR 184
VP R ++ L +G G Y +V A D VA+KK+ + RE+ +L+
Sbjct: 32 VPER---YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 88
Query: 185 RLDHINVIKLEGLVTSRMSC----SLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQL 240
+ H NVI L + T S +YLV M DL + K ++ V+ + Q+
Sbjct: 89 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 146
Query: 241 LCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRP 300
L GL + HS ++HRD+K SNL ++ + LKI DFGLA D + +T V T WYR
Sbjct: 147 LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRA 202
Query: 301 PELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRK- 359
PE++L +Y VD+WS GCI+AEL G+ + PG ++QL I +L G+P + +K
Sbjct: 203 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 262
Query: 360 -SKLPHATIFKPQQPYKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALRSEFFTM 418
S+ I Q K A F A+ L+E +L +D R +AA AL +F
Sbjct: 263 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 322
Query: 419 KPLPCDPSSLPKYPPSKEFDAKIRDE 444
P D Y S E + DE
Sbjct: 323 YHDPDDEPVADPYDQSFESRDLLIDE 348
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 108/326 (33%), Positives = 157/326 (48%), Gaps = 15/326 (4%)
Query: 125 VPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILR 184
VP R ++ L +G G Y +V A D VA+KK+ + RE+ +L+
Sbjct: 39 VPER---YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 95
Query: 185 RLDHINVIKLEGLVTSRMSC----SLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQL 240
+ H NVI L + T S +YLV M DL + K ++ V+ + Q+
Sbjct: 96 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 153
Query: 241 LCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRP 300
L GL + HS ++HRD+K SNL ++ + LKI DFGLA D + +T V T WYR
Sbjct: 154 LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRA 209
Query: 301 PELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRK- 359
PE++L +Y VD+WS GCI+AEL G+ + PG ++QL I +L G+P + +K
Sbjct: 210 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 269
Query: 360 -SKLPHATIFKPQQPYKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALRSEFFTM 418
S+ I Q K A F A+ L+E +L +D R +AA AL +F
Sbjct: 270 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 329
Query: 419 KPLPCDPSSLPKYPPSKEFDAKIRDE 444
P D Y S E + DE
Sbjct: 330 YHDPDDEPVADPYDQSFESRDLLIDE 355
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 108/326 (33%), Positives = 157/326 (48%), Gaps = 15/326 (4%)
Query: 125 VPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILR 184
VP R ++ L +G G Y +V A D VA+KK+ + RE+ +L+
Sbjct: 40 VPER---YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 96
Query: 185 RLDHINVIKLEGLVTSRMSC----SLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQL 240
+ H NVI L + T S +YLV M DL + K ++ V+ + Q+
Sbjct: 97 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 154
Query: 241 LCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRP 300
L GL + HS ++HRD+K SNL ++ + LKI DFGLA D + +T V T WYR
Sbjct: 155 LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRA 210
Query: 301 PELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRK- 359
PE++L +Y VD+WS GCI+AEL G+ + PG ++QL I +L G+P + +K
Sbjct: 211 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 270
Query: 360 -SKLPHATIFKPQQPYKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALRSEFFTM 418
S+ I Q K A F A+ L+E +L +D R +AA AL +F
Sbjct: 271 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 330
Query: 419 KPLPCDPSSLPKYPPSKEFDAKIRDE 444
P D Y S E + DE
Sbjct: 331 YHDPDDEPVADPYDQSFESRDLLIDE 356
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 108/326 (33%), Positives = 157/326 (48%), Gaps = 15/326 (4%)
Query: 125 VPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILR 184
VP R ++ L +G G Y +V A D VA+KK+ + RE+ +L+
Sbjct: 31 VPER---YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 87
Query: 185 RLDHINVIKLEGLVTSRMSC----SLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQL 240
+ H NVI L + T S +YLV M DL + K ++ V+ + Q+
Sbjct: 88 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 145
Query: 241 LCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRP 300
L GL + HS ++HRD+K SNL ++ + LKI DFGLA D + +T V T WYR
Sbjct: 146 LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRA 201
Query: 301 PELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRK- 359
PE++L +Y VD+WS GCI+AEL G+ + PG ++QL I +L G+P + +K
Sbjct: 202 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 261
Query: 360 -SKLPHATIFKPQQPYKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALRSEFFTM 418
S+ I Q K A F A+ L+E +L +D R +AA AL +F
Sbjct: 262 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 321
Query: 419 KPLPCDPSSLPKYPPSKEFDAKIRDE 444
P D Y S E + DE
Sbjct: 322 YHDPDDEPVADPYDQSFESRDLLIDE 347
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 149 bits (377), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 108/326 (33%), Positives = 157/326 (48%), Gaps = 15/326 (4%)
Query: 125 VPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILR 184
VP R ++ L +G G Y +V A D VA+KK+ + RE+ +L+
Sbjct: 43 VPER---YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 99
Query: 185 RLDHINVIKLEGLVTSRMSC----SLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQL 240
+ H NVI L + T S +YLV M DL + K ++ V+ + Q+
Sbjct: 100 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 157
Query: 241 LCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRP 300
L GL + HS ++HRD+K SNL ++ + LKI DFGLA D + +T V T WYR
Sbjct: 158 LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRA 213
Query: 301 PELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRK- 359
PE++L +Y VD+WS GCI+AEL G+ + PG ++QL I +L G+P + +K
Sbjct: 214 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 273
Query: 360 -SKLPHATIFKPQQPYKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALRSEFFTM 418
S+ I Q K A F A+ L+E +L +D R +AA AL +F
Sbjct: 274 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 333
Query: 419 KPLPCDPSSLPKYPPSKEFDAKIRDE 444
P D Y S E + DE
Sbjct: 334 YHDPDDEPVADPYDQSFESRDLLIDE 359
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 149 bits (377), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 108/326 (33%), Positives = 157/326 (48%), Gaps = 15/326 (4%)
Query: 125 VPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILR 184
VP R ++ L +G G Y +V A D VA+KK+ + RE+ +L+
Sbjct: 20 VPER---YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 185 RLDHINVIKLEGLVTSRMSC----SLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQL 240
+ H NVI L + T S +YLV M DL + K ++ V+ + Q+
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQI 134
Query: 241 LCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRP 300
L GL + HS ++HRD+K SNL ++ + LKI DFGLA D + +T V T WYR
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRA 190
Query: 301 PELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRK- 359
PE++L +Y VD+WS GCI+AEL G+ + PG ++QL I +L G+P + +K
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 250
Query: 360 -SKLPHATIFKPQQPYKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALRSEFFTM 418
S+ I Q K A F A+ L+E +L +D R +AA AL +F
Sbjct: 251 SSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
Query: 419 KPLPCDPSSLPKYPPSKEFDAKIRDE 444
P D Y S E + DE
Sbjct: 311 YHDPDDEPVADPYDQSFESRDLLIDE 336
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 149 bits (377), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 108/326 (33%), Positives = 157/326 (48%), Gaps = 15/326 (4%)
Query: 125 VPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILR 184
VP R ++ L +G G Y +V A D VA+KK+ + RE+ +L+
Sbjct: 22 VPER---YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 78
Query: 185 RLDHINVIKLEGLVTSRMSC----SLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQL 240
+ H NVI L + T S +YLV M DL + K ++ V+ + Q+
Sbjct: 79 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 136
Query: 241 LCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRP 300
L GL + HS ++HRD+K SNL ++ + LKI DFGLA D + +T V T WYR
Sbjct: 137 LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRA 192
Query: 301 PELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRK- 359
PE++L +Y VD+WS GCI+AEL G+ + PG ++QL I +L G+P + +K
Sbjct: 193 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 252
Query: 360 -SKLPHATIFKPQQPYKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALRSEFFTM 418
S+ I Q K A F A+ L+E +L +D R +AA AL +F
Sbjct: 253 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 312
Query: 419 KPLPCDPSSLPKYPPSKEFDAKIRDE 444
P D Y S E + DE
Sbjct: 313 YHDPDDEPVADPYDQSFESRDLLIDE 338
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 149 bits (377), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 108/326 (33%), Positives = 157/326 (48%), Gaps = 15/326 (4%)
Query: 125 VPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILR 184
VP R ++ L +G G Y +V A D VA+KK+ + RE+ +L+
Sbjct: 22 VPER---YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 78
Query: 185 RLDHINVIKLEGLVTSRMSC----SLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQL 240
+ H NVI L + T S +YLV M DL + K ++ V+ + Q+
Sbjct: 79 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 136
Query: 241 LCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRP 300
L GL + HS ++HRD+K SNL ++ + LKI DFGLA D + +T V T WYR
Sbjct: 137 LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRA 192
Query: 301 PELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRK- 359
PE++L +Y VD+WS GCI+AEL G+ + PG ++QL I +L G+P + +K
Sbjct: 193 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 252
Query: 360 -SKLPHATIFKPQQPYKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALRSEFFTM 418
S+ I Q K A F A+ L+E +L +D R +AA AL +F
Sbjct: 253 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 312
Query: 419 KPLPCDPSSLPKYPPSKEFDAKIRDE 444
P D Y S E + DE
Sbjct: 313 YHDPDDEPVADPYDQSFESRDLLIDE 338
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 149 bits (377), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 108/326 (33%), Positives = 157/326 (48%), Gaps = 15/326 (4%)
Query: 125 VPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILR 184
VP R ++ L +G G Y +V A D VA+KK+ + RE+ +L+
Sbjct: 26 VPER---YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 82
Query: 185 RLDHINVIKLEGLVTSRMSC----SLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQL 240
+ H NVI L + T S +YLV M DL + K ++ V+ + Q+
Sbjct: 83 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 140
Query: 241 LCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRP 300
L GL + HS ++HRD+K SNL ++ + LKI DFGLA D + +T V T WYR
Sbjct: 141 LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRA 196
Query: 301 PELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRK- 359
PE++L +Y VD+WS GCI+AEL G+ + PG ++QL I +L G+P + +K
Sbjct: 197 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 256
Query: 360 -SKLPHATIFKPQQPYKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALRSEFFTM 418
S+ I Q K A F A+ L+E +L +D R +AA AL +F
Sbjct: 257 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 316
Query: 419 KPLPCDPSSLPKYPPSKEFDAKIRDE 444
P D Y S E + DE
Sbjct: 317 YHDPDDEPVADPYDQSFESRDLLIDE 342
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 149 bits (377), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 108/326 (33%), Positives = 157/326 (48%), Gaps = 15/326 (4%)
Query: 125 VPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILR 184
VP R ++ L +G G Y +V A D VA+KK+ + RE+ +L+
Sbjct: 30 VPER---YQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLK 86
Query: 185 RLDHINVIKLEGLVTSRMSC----SLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQL 240
+ H NVI L + T S +YLV M DL + K ++ V+ + Q+
Sbjct: 87 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQI 144
Query: 241 LCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRP 300
L GL + HS ++HRD+K SNL ++ + LKI DFGLA D + +T V T WYR
Sbjct: 145 LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRA 200
Query: 301 PELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRK- 359
PE++L +Y VD+WS GCI+AEL G+ + PG ++QL I +L G+P + +K
Sbjct: 201 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 260
Query: 360 -SKLPHATIFKPQQPYKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALRSEFFTM 418
S+ I Q K A F A+ L+E +L +D R +AA AL +F
Sbjct: 261 SSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 320
Query: 419 KPLPCDPSSLPKYPPSKEFDAKIRDE 444
P D Y S E + DE
Sbjct: 321 YHDPDDEPVADPYDQSFESRDLLIDE 346
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 149 bits (377), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 108/326 (33%), Positives = 157/326 (48%), Gaps = 15/326 (4%)
Query: 125 VPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILR 184
VP R ++ L +G G Y +V A D VA+KK+ + RE+ +L+
Sbjct: 20 VPER---YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 185 RLDHINVIKLEGLVTSRMSC----SLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQL 240
+ H NVI L + T S +YLV M DL + K ++ V+ + Q+
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 134
Query: 241 LCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRP 300
L GL + HS ++HRD+K SNL ++ + LKI DFGLA D + +T V T WYR
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRA 190
Query: 301 PELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRK- 359
PE++L +Y VD+WS GCI+AEL G+ + PG ++QL I +L G+P + +K
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 250
Query: 360 -SKLPHATIFKPQQPYKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALRSEFFTM 418
S+ I Q K A F A+ L+E +L +D R +AA AL +F
Sbjct: 251 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
Query: 419 KPLPCDPSSLPKYPPSKEFDAKIRDE 444
P D Y S E + DE
Sbjct: 311 YHDPDDEPVADPYDQSFESRDLLIDE 336
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 149 bits (377), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 108/326 (33%), Positives = 157/326 (48%), Gaps = 15/326 (4%)
Query: 125 VPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILR 184
VP R ++ L +G G Y +V A D VA+KK+ + RE+ +L+
Sbjct: 22 VPER---YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 78
Query: 185 RLDHINVIKLEGLVTSRMSC----SLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQL 240
+ H NVI L + T S +YLV M DL + K ++ V+ + Q+
Sbjct: 79 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 136
Query: 241 LCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRP 300
L GL + HS ++HRD+K SNL ++ + LKI DFGLA D + +T V T WYR
Sbjct: 137 LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRA 192
Query: 301 PELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRK- 359
PE++L +Y VD+WS GCI+AEL G+ + PG ++QL I +L G+P + +K
Sbjct: 193 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 252
Query: 360 -SKLPHATIFKPQQPYKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALRSEFFTM 418
S+ I Q K A F A+ L+E +L +D R +AA AL +F
Sbjct: 253 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 312
Query: 419 KPLPCDPSSLPKYPPSKEFDAKIRDE 444
P D Y S E + DE
Sbjct: 313 YHDPDDEPVADPYDQSFESRDLLIDE 338
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 149 bits (377), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 105/318 (33%), Positives = 155/318 (48%), Gaps = 18/318 (5%)
Query: 125 VPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILR 184
VP R ++ L +G G Y +V A D VA+KK+ + RE+ +L+
Sbjct: 20 VPER---YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 185 RLDHINVIKLEGLVTSRMSC----SLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQL 240
+ H NVI L + T S +YLV M DL + K ++ V+ + Q+
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 134
Query: 241 LCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRP 300
L GL + HS ++HRD+K SNL ++ + LKI DFGLA D + +T V T WYR
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRA 190
Query: 301 PELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRK- 359
PE++L +Y VD+WS GCI+AEL G+ + PG ++QL I +L G+P + +K
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 250
Query: 360 -SKLPHATIFKPQQPYKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALRSEFFTM 418
S+ I Q K A F A+ L+E +L +D R +AA AL +F
Sbjct: 251 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
Query: 419 KPLPCDPSSLPKYPPSKE 436
DP P P+ +
Sbjct: 311 YH---DPDDEPVADPTDQ 325
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 149 bits (377), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 108/326 (33%), Positives = 157/326 (48%), Gaps = 15/326 (4%)
Query: 125 VPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILR 184
VP R ++ L +G G Y +V A D VA+KK+ + RE+ +L+
Sbjct: 16 VPER---YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLK 72
Query: 185 RLDHINVIKLEGLVTSRMSC----SLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQL 240
+ H NVI L + T S +YLV M DL + K ++ V+ + Q+
Sbjct: 73 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK--CAKLTDDHVQFLIYQI 130
Query: 241 LCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRP 300
L GL + HS ++HRD+K SNL ++ + LKI DFGLA D + +T V T WYR
Sbjct: 131 LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRA 186
Query: 301 PELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRK- 359
PE++L +Y VD+WS GCI+AEL G+ + PG ++QL I +L G+P + +K
Sbjct: 187 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 246
Query: 360 -SKLPHATIFKPQQPYKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALRSEFFTM 418
S+ I Q K A F A+ L+E +L +D R +AA AL +F
Sbjct: 247 SSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 306
Query: 419 KPLPCDPSSLPKYPPSKEFDAKIRDE 444
P D Y S E + DE
Sbjct: 307 YHDPDDEPVADPYDQSFESRDLLIDE 332
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 149 bits (377), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 101/298 (33%), Positives = 149/298 (50%), Gaps = 15/298 (5%)
Query: 125 VPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILR 184
VP R ++ L +G G Y +V A D VA+KK+ + RE+ +L+
Sbjct: 20 VPER---YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 185 RLDHINVIKLEGLVTSRMSC----SLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQL 240
+ H NVI L + T S +YLV M DL + K ++ V+ + Q+
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 134
Query: 241 LCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRP 300
L GL + HS ++HRD+K SNL ++ + LKI DFGLA D + +T V T WYR
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRA 190
Query: 301 PELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRK- 359
PE++L +Y VD+WS GCI+AEL G+ + PG ++QL I +L G+P + +K
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 250
Query: 360 -SKLPHATIFKPQQPYKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALRSEFF 416
S+ I Q K A F A+ L+E +L +D R +AA AL +F
Sbjct: 251 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 149 bits (377), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 108/326 (33%), Positives = 157/326 (48%), Gaps = 15/326 (4%)
Query: 125 VPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILR 184
VP R ++ L +G G Y +V A D VA+KK+ + RE+ +L+
Sbjct: 16 VPER---YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLK 72
Query: 185 RLDHINVIKLEGLVTSRMSC----SLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQL 240
+ H NVI L + T S +YLV M DL + K ++ V+ + Q+
Sbjct: 73 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQI 130
Query: 241 LCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRP 300
L GL + HS ++HRD+K SNL ++ + LKI DFGLA D + +T V T WYR
Sbjct: 131 LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRA 186
Query: 301 PELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRK- 359
PE++L +Y VD+WS GCI+AEL G+ + PG ++QL I +L G+P + +K
Sbjct: 187 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 246
Query: 360 -SKLPHATIFKPQQPYKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALRSEFFTM 418
S+ I Q K A F A+ L+E +L +D R +AA AL +F
Sbjct: 247 SSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 306
Query: 419 KPLPCDPSSLPKYPPSKEFDAKIRDE 444
P D Y S E + DE
Sbjct: 307 YHDPDDEPVADPYDQSFESRDLLIDE 332
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 149 bits (376), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 101/298 (33%), Positives = 149/298 (50%), Gaps = 15/298 (5%)
Query: 125 VPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILR 184
VP R ++ L +G G Y +V A D VA+KK+ + RE+ +L+
Sbjct: 20 VPER---YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 185 RLDHINVIKLEGLVTSRMSC----SLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQL 240
+ H NVI L + T S +YLV M DL + K ++ V+ + Q+
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 134
Query: 241 LCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRP 300
L GL + HS ++HRD+K SNL ++ + LKI DFGLA D + +T V T WYR
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRA 190
Query: 301 PELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRK- 359
PE++L +Y VD+WS GCI+AEL G+ + PG ++QL I +L G+P + +K
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 250
Query: 360 -SKLPHATIFKPQQPYKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALRSEFF 416
S+ I Q K A F A+ L+E +L +D R +AA AL +F
Sbjct: 251 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 149 bits (376), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 108/326 (33%), Positives = 157/326 (48%), Gaps = 15/326 (4%)
Query: 125 VPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILR 184
VP R ++ L +G G Y +V A D VA+KK+ + RE+ +L+
Sbjct: 20 VPER---YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 185 RLDHINVIKLEGLVTSRMSC----SLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQL 240
+ H NVI L + T S +YLV M DL + K ++ V+ + Q+
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 134
Query: 241 LCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRP 300
L GL + HS ++HRD+K SNL ++ + LKI DFGLA D + +T V T WYR
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRA 190
Query: 301 PELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRK- 359
PE++L +Y VD+WS GCI+AEL G+ + PG ++QL I +L G+P + +K
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 250
Query: 360 -SKLPHATIFKPQQPYKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALRSEFFTM 418
S+ I Q K A F A+ L+E +L +D R +AA AL +F
Sbjct: 251 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
Query: 419 KPLPCDPSSLPKYPPSKEFDAKIRDE 444
P D Y S E + DE
Sbjct: 311 YHDPDDEPVADPYDQSFESRDLLIDE 336
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 149 bits (376), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 108/326 (33%), Positives = 157/326 (48%), Gaps = 15/326 (4%)
Query: 125 VPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILR 184
VP R ++ L +G G Y +V A D VA+KK+ + RE+ +L+
Sbjct: 27 VPER---YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 83
Query: 185 RLDHINVIKLEGLVTSRMSC----SLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQL 240
+ H NVI L + T S +YLV M DL + K ++ V+ + Q+
Sbjct: 84 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 141
Query: 241 LCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRP 300
L GL + HS ++HRD+K SNL ++ + LKI DFGLA D + +T V T WYR
Sbjct: 142 LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRA 197
Query: 301 PELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRK- 359
PE++L +Y VD+WS GCI+AEL G+ + PG ++QL I +L G+P + +K
Sbjct: 198 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 257
Query: 360 -SKLPHATIFKPQQPYKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALRSEFFTM 418
S+ I Q K A F A+ L+E +L +D R +AA AL +F
Sbjct: 258 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 317
Query: 419 KPLPCDPSSLPKYPPSKEFDAKIRDE 444
P D Y S E + DE
Sbjct: 318 YHDPDDEPVADPYDQSFESRDLLIDE 343
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 149 bits (376), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 108/326 (33%), Positives = 157/326 (48%), Gaps = 15/326 (4%)
Query: 125 VPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILR 184
VP R ++ L +G G Y +V A D VA+KK+ + RE+ +L+
Sbjct: 25 VPER---YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 81
Query: 185 RLDHINVIKLEGLVTSRMSC----SLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQL 240
+ H NVI L + T S +YLV M DL + K ++ V+ + Q+
Sbjct: 82 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 139
Query: 241 LCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRP 300
L GL + HS ++HRD+K SNL ++ + LKI DFGLA D + +T V T WYR
Sbjct: 140 LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRA 195
Query: 301 PELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRK- 359
PE++L +Y VD+WS GCI+AEL G+ + PG ++QL I +L G+P + +K
Sbjct: 196 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 255
Query: 360 -SKLPHATIFKPQQPYKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALRSEFFTM 418
S+ I Q K A F A+ L+E +L +D R +AA AL +F
Sbjct: 256 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 315
Query: 419 KPLPCDPSSLPKYPPSKEFDAKIRDE 444
P D Y S E + DE
Sbjct: 316 YHDPDDEPVADPYDQSFESRDLLIDE 341
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 149 bits (376), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 108/326 (33%), Positives = 157/326 (48%), Gaps = 15/326 (4%)
Query: 125 VPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILR 184
VP R ++ L +G G Y +V A D VA+KK+ + RE+ +L+
Sbjct: 19 VPER---YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 75
Query: 185 RLDHINVIKLEGLVTSRMSC----SLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQL 240
+ H NVI L + T S +YLV M DL + K ++ V+ + Q+
Sbjct: 76 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 133
Query: 241 LCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRP 300
L GL + HS ++HRD+K SNL ++ + LKI DFGLA D + +T V T WYR
Sbjct: 134 LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRA 189
Query: 301 PELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRK- 359
PE++L +Y VD+WS GCI+AEL G+ + PG ++QL I +L G+P + +K
Sbjct: 190 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 249
Query: 360 -SKLPHATIFKPQQPYKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALRSEFFTM 418
S+ I Q K A F A+ L+E +L +D R +AA AL +F
Sbjct: 250 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 309
Query: 419 KPLPCDPSSLPKYPPSKEFDAKIRDE 444
P D Y S E + DE
Sbjct: 310 YHDPDDEPVADPYDQSFESRDLLIDE 335
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 149 bits (376), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 108/326 (33%), Positives = 157/326 (48%), Gaps = 15/326 (4%)
Query: 125 VPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILR 184
VP R ++ L +G G Y +V A D VA+KK+ + RE+ +L+
Sbjct: 20 VPER---YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 185 RLDHINVIKLEGLVTSRMSC----SLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQL 240
+ H NVI L + T S +YLV M DL + K ++ V+ + Q+
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 134
Query: 241 LCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRP 300
L GL + HS ++HRD+K SNL ++ + LKI DFGLA D + +T V T WYR
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGXVATRWYRA 190
Query: 301 PELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRK- 359
PE++L +Y VD+WS GCI+AEL G+ + PG ++QL I +L G+P + +K
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 250
Query: 360 -SKLPHATIFKPQQPYKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALRSEFFTM 418
S+ I Q K A F A+ L+E +L +D R +AA AL +F
Sbjct: 251 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
Query: 419 KPLPCDPSSLPKYPPSKEFDAKIRDE 444
P D Y S E + DE
Sbjct: 311 YHDPDDEPVADPYDQSFESRDLLIDE 336
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 149 bits (376), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 101/298 (33%), Positives = 149/298 (50%), Gaps = 15/298 (5%)
Query: 125 VPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILR 184
VP R ++ L +G G Y +V A D VA+KK+ + RE+ +L+
Sbjct: 20 VPER---YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 185 RLDHINVIKLEGLVTSRMSC----SLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQL 240
+ H NVI L + T S +YLV M DL + K ++ V+ + Q+
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 134
Query: 241 LCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRP 300
L GL + HS ++HRD+K SNL ++ + LKI DFGLA D + +T V T WYR
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRA 190
Query: 301 PELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRK- 359
PE++L +Y VD+WS GCI+AEL G+ + PG ++QL I +L G+P + +K
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 250
Query: 360 -SKLPHATIFKPQQPYKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALRSEFF 416
S+ I Q K A F A+ L+E +L +D R +AA AL +F
Sbjct: 251 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 149 bits (375), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 108/326 (33%), Positives = 157/326 (48%), Gaps = 15/326 (4%)
Query: 125 VPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILR 184
VP R ++ L +G G Y +V A D VA+KK+ + RE+ +L+
Sbjct: 18 VPER---YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 74
Query: 185 RLDHINVIKLEGLVTSRMSC----SLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQL 240
+ H NVI L + T S +YLV M DL + K ++ V+ + Q+
Sbjct: 75 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 132
Query: 241 LCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRP 300
L GL + HS ++HRD+K SNL ++ + LKI DFGLA D + +T V T WYR
Sbjct: 133 LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRA 188
Query: 301 PELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRK- 359
PE++L +Y VD+WS GCI+AEL G+ + PG ++QL I +L G+P + +K
Sbjct: 189 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 248
Query: 360 -SKLPHATIFKPQQPYKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALRSEFFTM 418
S+ I Q K A F A+ L+E +L +D R +AA AL +F
Sbjct: 249 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 308
Query: 419 KPLPCDPSSLPKYPPSKEFDAKIRDE 444
P D Y S E + DE
Sbjct: 309 YHDPDDEPVADPYDQSFESRDLLIDE 334
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 149 bits (375), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 108/326 (33%), Positives = 157/326 (48%), Gaps = 15/326 (4%)
Query: 125 VPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILR 184
VP R ++ L +G G Y +V A D VA+KK+ + RE+ +L+
Sbjct: 17 VPER---YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 73
Query: 185 RLDHINVIKLEGLVTSRMSC----SLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQL 240
+ H NVI L + T S +YLV M DL + K ++ V+ + Q+
Sbjct: 74 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQI 131
Query: 241 LCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRP 300
L GL + HS ++HRD+K SNL ++ + LKI DFGLA D + +T V T WYR
Sbjct: 132 LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRA 187
Query: 301 PELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRK- 359
PE++L +Y VD+WS GCI+AEL G+ + PG ++QL I +L G+P + +K
Sbjct: 188 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 247
Query: 360 -SKLPHATIFKPQQPYKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALRSEFFTM 418
S+ I Q K A F A+ L+E +L +D R +AA AL +F
Sbjct: 248 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 307
Query: 419 KPLPCDPSSLPKYPPSKEFDAKIRDE 444
P D Y S E + DE
Sbjct: 308 YHDPDDEPVADPYDQSFESRDLLIDE 333
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 149 bits (375), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 108/326 (33%), Positives = 157/326 (48%), Gaps = 15/326 (4%)
Query: 125 VPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILR 184
VP R ++ L +G G Y +V A D VA+KK+ + RE+ +L+
Sbjct: 16 VPER---YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 72
Query: 185 RLDHINVIKLEGLVTSRMSC----SLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQL 240
+ H NVI L + T S +YLV M DL + K ++ V+ + Q+
Sbjct: 73 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 130
Query: 241 LCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRP 300
L GL + HS ++HRD+K SNL ++ + LKI DFGLA D + +T V T WYR
Sbjct: 131 LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRA 186
Query: 301 PELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRK- 359
PE++L +Y VD+WS GCI+AEL G+ + PG ++QL I +L G+P + +K
Sbjct: 187 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 246
Query: 360 -SKLPHATIFKPQQPYKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALRSEFFTM 418
S+ I Q K A F A+ L+E +L +D R +AA AL +F
Sbjct: 247 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 306
Query: 419 KPLPCDPSSLPKYPPSKEFDAKIRDE 444
P D Y S E + DE
Sbjct: 307 YHDPDDEPVADPYDQSFESRDLLIDE 332
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 149 bits (375), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 108/326 (33%), Positives = 157/326 (48%), Gaps = 15/326 (4%)
Query: 125 VPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILR 184
VP R ++ L +G G Y +V A D VA+KK+ + RE+ +L+
Sbjct: 25 VPER---YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 81
Query: 185 RLDHINVIKLEGLVTSRMSC----SLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQL 240
+ H NVI L + T S +YLV M DL + K ++ V+ + Q+
Sbjct: 82 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 139
Query: 241 LCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRP 300
L GL + HS ++HRD+K SNL ++ + LKI DFGLA D + +T V T WYR
Sbjct: 140 LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRA 195
Query: 301 PELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRK- 359
PE++L +Y VD+WS GCI+AEL G+ + PG ++QL I +L G+P + +K
Sbjct: 196 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 255
Query: 360 -SKLPHATIFKPQQPYKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALRSEFFTM 418
S+ I Q K A F A+ L+E +L +D R +AA AL +F
Sbjct: 256 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 315
Query: 419 KPLPCDPSSLPKYPPSKEFDAKIRDE 444
P D Y S E + DE
Sbjct: 316 YHDPDDEPVADPYDQSFESRDLLIDE 341
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 149 bits (375), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 108/326 (33%), Positives = 157/326 (48%), Gaps = 15/326 (4%)
Query: 125 VPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILR 184
VP R ++ L +G G Y +V A D VA+KK+ + RE+ +L+
Sbjct: 17 VPER---YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 73
Query: 185 RLDHINVIKLEGLVTSRMSC----SLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQL 240
+ H NVI L + T S +YLV M DL + K ++ V+ + Q+
Sbjct: 74 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 131
Query: 241 LCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRP 300
L GL + HS ++HRD+K SNL ++ + LKI DFGLA D + +T V T WYR
Sbjct: 132 LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRA 187
Query: 301 PELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRK- 359
PE++L +Y VD+WS GCI+AEL G+ + PG ++QL I +L G+P + +K
Sbjct: 188 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 247
Query: 360 -SKLPHATIFKPQQPYKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALRSEFFTM 418
S+ I Q K A F A+ L+E +L +D R +AA AL +F
Sbjct: 248 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 307
Query: 419 KPLPCDPSSLPKYPPSKEFDAKIRDE 444
P D Y S E + DE
Sbjct: 308 YHDPDDEPVADPYDQSFESRDLLIDE 333
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 149 bits (375), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 108/326 (33%), Positives = 157/326 (48%), Gaps = 15/326 (4%)
Query: 125 VPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILR 184
VP R ++ L +G G Y +V A D VA+KK+ + RE+ +L+
Sbjct: 20 VPER---YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 185 RLDHINVIKLEGLVTSRMSC----SLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQL 240
+ H NVI L + T S +YLV M DL + K ++ V+ + Q+
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 134
Query: 241 LCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRP 300
L GL + HS ++HRD+K SNL ++ + LKI DFGLA D + +T V T WYR
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRA 190
Query: 301 PELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRK- 359
PE++L +Y VD+WS GCI+AEL G+ + PG ++QL I +L G+P + +K
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 250
Query: 360 -SKLPHATIFKPQQPYKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALRSEFFTM 418
S+ I Q K A F A+ L+E +L +D R +AA AL +F
Sbjct: 251 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
Query: 419 KPLPCDPSSLPKYPPSKEFDAKIRDE 444
P D Y S E + DE
Sbjct: 311 YHDPDDEPVADPYDQSFESRDLLIDE 336
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 148 bits (374), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 107/326 (32%), Positives = 156/326 (47%), Gaps = 15/326 (4%)
Query: 125 VPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILR 184
VP R ++ L +G G Y +V A D VA+KK+ + RE+ +L+
Sbjct: 40 VPER---YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLK 96
Query: 185 RLDHINVIKLEGLVTSRMSC----SLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQL 240
+ H NVI L + T S +YLV M DL + K ++ V+ + Q+
Sbjct: 97 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQI 154
Query: 241 LCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRP 300
L GL + HS ++HRD+K SNL ++ + LKI DFGLA D + + V T WYR
Sbjct: 155 LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MXGXVATRWYRA 210
Query: 301 PELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRK- 359
PE++L +Y VD+WS GCI+AEL G+ + PG ++QL I +L G+P + +K
Sbjct: 211 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 270
Query: 360 -SKLPHATIFKPQQPYKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALRSEFFTM 418
S+ I Q K A F A+ L+E +L +D R +AA AL +F
Sbjct: 271 SSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 330
Query: 419 KPLPCDPSSLPKYPPSKEFDAKIRDE 444
P D Y S E + DE
Sbjct: 331 YHDPDDEPVADPYDQSFESRDLLIDE 356
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 107/326 (32%), Positives = 157/326 (48%), Gaps = 15/326 (4%)
Query: 125 VPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILR 184
VP R ++ L +G G Y +V A D VA+KK+ + RE+ +L+
Sbjct: 20 VPER---YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 185 RLDHINVIKLEGLVTSRMSC----SLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQL 240
+ H NVI L + T S +YLV M DL + K ++ V+ + Q+
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 134
Query: 241 LCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRP 300
L GL + HS ++HRD+K SNL ++ + LKI D+GLA D + +T V T WYR
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDYGLARHTDDE----MTGYVATRWYRA 190
Query: 301 PELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRK- 359
PE++L +Y VD+WS GCI+AEL G+ + PG ++QL I +L G+P + +K
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 250
Query: 360 -SKLPHATIFKPQQPYKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALRSEFFTM 418
S+ I Q K A F A+ L+E +L +D R +AA AL +F
Sbjct: 251 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
Query: 419 KPLPCDPSSLPKYPPSKEFDAKIRDE 444
P D Y S E + DE
Sbjct: 311 YHDPDDEPVADPYDQSFESRDLLIDE 336
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 108/326 (33%), Positives = 158/326 (48%), Gaps = 15/326 (4%)
Query: 125 VPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILR 184
VP R ++ L +G G Y +V A D VA+KK+ + RE+ +L+
Sbjct: 27 VPER---YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 83
Query: 185 RLDHINVIKLEGLVTSRMSC----SLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQL 240
+ H NVI L + T S +YLV M DL + K ++ V+ + Q+
Sbjct: 84 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 141
Query: 241 LCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRP 300
L GL + HS ++HRD+K SNL ++ + LKI DFGLA + D+ +T V T WYR
Sbjct: 142 LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-HTADE---MTGYVATRWYRA 197
Query: 301 PELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRK- 359
PE++L +Y VD+WS GCI+AEL G+ + PG ++QL I +L G+P + +K
Sbjct: 198 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 257
Query: 360 -SKLPHATIFKPQQPYKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALRSEFFTM 418
S+ I Q K A F A+ L+E +L +D R +AA AL +F
Sbjct: 258 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 317
Query: 419 KPLPCDPSSLPKYPPSKEFDAKIRDE 444
P D Y S E + DE
Sbjct: 318 YHDPDDEPVADPYDQSSESRDLLIDE 343
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 107/326 (32%), Positives = 156/326 (47%), Gaps = 15/326 (4%)
Query: 125 VPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILR 184
VP R ++ L +G G Y +V A D VA+KK+ + RE+ +L+
Sbjct: 43 VPER---YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 99
Query: 185 RLDHINVIKLEGLVTSRMSC----SLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQL 240
+ H NVI L + T S +YLV M DL + K ++ V+ + Q+
Sbjct: 100 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 157
Query: 241 LCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRP 300
L GL + HS ++HRD+K SNL ++ + LKI DFGLA D + + V T WYR
Sbjct: 158 LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MXGYVATRWYRA 213
Query: 301 PELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRK- 359
PE++L +Y VD+WS GCI+AEL G+ + PG ++QL I +L G+P + +K
Sbjct: 214 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 273
Query: 360 -SKLPHATIFKPQQPYKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALRSEFFTM 418
S+ I Q K A F A+ L+E +L +D R +AA AL +F
Sbjct: 274 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 333
Query: 419 KPLPCDPSSLPKYPPSKEFDAKIRDE 444
P D Y S E + DE
Sbjct: 334 YHDPDDEPVADPYDQSFESRDLLIDE 359
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 107/326 (32%), Positives = 156/326 (47%), Gaps = 15/326 (4%)
Query: 125 VPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILR 184
VP R ++ L +G G Y +V A D VA+KK+ + RE+ +L+
Sbjct: 20 VPER---YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 185 RLDHINVIKLEGLVTSRMSC----SLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQL 240
+ H NVI L + T S +YLV M DL + K ++ V+ + Q+
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQI 134
Query: 241 LCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRP 300
L GL + HS ++HRD+K SNL ++ + LKI DFGLA D + + V T WYR
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MAGFVATRWYRA 190
Query: 301 PELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRK- 359
PE++L +Y VD+WS GCI+AEL G+ + PG ++QL I +L G+P + +K
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 250
Query: 360 -SKLPHATIFKPQQPYKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALRSEFFTM 418
S+ I Q K A F A+ L+E +L +D R +AA AL +F
Sbjct: 251 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
Query: 419 KPLPCDPSSLPKYPPSKEFDAKIRDE 444
P D Y S E + DE
Sbjct: 311 YHDPDDEPVADPYDQSFESRDLLIDE 336
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 107/326 (32%), Positives = 156/326 (47%), Gaps = 15/326 (4%)
Query: 125 VPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILR 184
VP R ++ L +G G Y +V A D VA+KK+ + RE+ +L+
Sbjct: 20 VPER---YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 185 RLDHINVIKLEGLVTSRMSC----SLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQL 240
+ H NVI L + T S +YLV M DL + K ++ V+ + Q+
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQI 134
Query: 241 LCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRP 300
L GL + HS ++HRD+K SNL ++ + LKI DFGLA D + + V T WYR
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MAGFVATRWYRA 190
Query: 301 PELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRK- 359
PE++L +Y VD+WS GCI+AEL G+ + PG ++QL I +L G+P + +K
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 250
Query: 360 -SKLPHATIFKPQQPYKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALRSEFFTM 418
S+ I Q K A F A+ L+E +L +D R +AA AL +F
Sbjct: 251 SSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
Query: 419 KPLPCDPSSLPKYPPSKEFDAKIRDE 444
P D Y S E + DE
Sbjct: 311 YHDPDDEPVADPYDQSFESRDLLIDE 336
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 108/326 (33%), Positives = 158/326 (48%), Gaps = 15/326 (4%)
Query: 125 VPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILR 184
VP R ++ L +G G Y +V A D VA+KK+ + RE+ +L+
Sbjct: 27 VPER---YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 83
Query: 185 RLDHINVIKLEGLVTSRMSC----SLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQL 240
+ H NVI L + T S +YLV M DL + K ++ V+ + Q+
Sbjct: 84 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 141
Query: 241 LCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRP 300
L GL + HS ++HRD+K SNL ++ + LKI DFGLA + D+ +T V T WYR
Sbjct: 142 LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-HTADE---MTGYVATRWYRA 197
Query: 301 PELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRK- 359
PE++L +Y VD+WS GCI+AEL G+ + PG ++QL I +L G+P + +K
Sbjct: 198 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 257
Query: 360 -SKLPHATIFKPQQPYKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALRSEFFTM 418
S+ I Q K A F A+ L+E +L +D R +AA AL +F
Sbjct: 258 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 317
Query: 419 KPLPCDPSSLPKYPPSKEFDAKIRDE 444
P D Y S E + DE
Sbjct: 318 YHDPDDEPVADPYDQSLESRDLLIDE 343
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 107/326 (32%), Positives = 156/326 (47%), Gaps = 15/326 (4%)
Query: 125 VPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILR 184
VP R ++ L +G G Y +V A D VA+KK+ + RE+ +L+
Sbjct: 16 VPER---YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLK 72
Query: 185 RLDHINVIKLEGLVTSRMSC----SLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQL 240
+ H NVI L + T S +YLV M DL + K ++ V+ + Q+
Sbjct: 73 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQI 130
Query: 241 LCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRP 300
L GL + HS ++HRD+K SNL ++ + LKI DFGLA D + + V T WYR
Sbjct: 131 LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MAGFVATRWYRA 186
Query: 301 PELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRK- 359
PE++L +Y VD+WS GCI+AEL G+ + PG ++QL I +L G+P + +K
Sbjct: 187 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 246
Query: 360 -SKLPHATIFKPQQPYKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALRSEFFTM 418
S+ I Q K A F A+ L+E +L +D R +AA AL +F
Sbjct: 247 SSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 306
Query: 419 KPLPCDPSSLPKYPPSKEFDAKIRDE 444
P D Y S E + DE
Sbjct: 307 YHDPDDEPVADPYDQSFESRDLLIDE 332
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 108/326 (33%), Positives = 158/326 (48%), Gaps = 15/326 (4%)
Query: 125 VPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILR 184
VP R ++ L +G G Y +V A D VA+KK+ + RE+ +L+
Sbjct: 27 VPER---YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 83
Query: 185 RLDHINVIKLEGLVTSRMSC----SLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQL 240
+ H NVI L + T S +YLV M DL + K ++ V+ + Q+
Sbjct: 84 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 141
Query: 241 LCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRP 300
L GL + HS ++HRD+K SNL ++ + LKI DFGLA + D+ +T V T WYR
Sbjct: 142 LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-HTADE---MTGYVATRWYRA 197
Query: 301 PELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRK- 359
PE++L +Y VD+WS GCI+AEL G+ + PG ++QL I +L G+P + +K
Sbjct: 198 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 257
Query: 360 -SKLPHATIFKPQQPYKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALRSEFFTM 418
S+ I Q K A F A+ L+E +L +D R +AA AL +F
Sbjct: 258 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 317
Query: 419 KPLPCDPSSLPKYPPSKEFDAKIRDE 444
P D Y S E + DE
Sbjct: 318 YHDPDDEPVADPYDQSFESRDLLIDE 343
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 107/326 (32%), Positives = 156/326 (47%), Gaps = 15/326 (4%)
Query: 125 VPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILR 184
VP R ++ L +G G Y +V A D VA+KK+ + RE+ +L+
Sbjct: 20 VPER---YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 185 RLDHINVIKLEGLVTSRMSC----SLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQL 240
+ H NVI L + T S +YLV M DL + K ++ V+ + Q+
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQI 134
Query: 241 LCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRP 300
L GL + HS ++HRD+K SNL ++ + LKI DF LA D + +T V T WYR
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFYLARHTDDE----MTGYVATRWYRA 190
Query: 301 PELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRK- 359
PE++L +Y VD+WS GCI+AEL G+ + PG ++QL I +L G+P + +K
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 250
Query: 360 -SKLPHATIFKPQQPYKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALRSEFFTM 418
S+ I Q K A F A+ L+E +L +D R +AA AL +F
Sbjct: 251 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
Query: 419 KPLPCDPSSLPKYPPSKEFDAKIRDE 444
P D Y S E + DE
Sbjct: 311 YHDPDDEPVADPYDQSFESRDLLIDE 336
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 107/326 (32%), Positives = 156/326 (47%), Gaps = 15/326 (4%)
Query: 125 VPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILR 184
VP R ++ L +G G Y +V A D VA+KK+ + RE+ +L+
Sbjct: 20 VPER---YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 185 RLDHINVIKLEGLVTSRMSC----SLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQL 240
+ H NVI L + T S +YLV M DL + K ++ V+ + Q+
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 134
Query: 241 LCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRP 300
L GL + HS ++HRD+K SNL ++ + LKI FGLA D + +T V T WYR
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILGFGLARHTDDE----MTGYVATRWYRA 190
Query: 301 PELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRK- 359
PE++L +Y VD+WS GCI+AEL G+ + PG ++QL I +L G+P + +K
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 250
Query: 360 -SKLPHATIFKPQQPYKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALRSEFFTM 418
S+ I Q K A F A+ L+E +L +D R +AA AL +F
Sbjct: 251 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
Query: 419 KPLPCDPSSLPKYPPSKEFDAKIRDE 444
P D Y S E + DE
Sbjct: 311 YHDPDDEPVADPYDQSFESRDLLIDE 336
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 145 bits (367), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 109/327 (33%), Positives = 162/327 (49%), Gaps = 21/327 (6%)
Query: 129 ADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVR-FDNLEPESVRFMAREIHILRRLD 187
+ F+ +G+G Y V A +IVA+KK+ FD +P REI IL+
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFD--KPLFALRTLREIKILKHFK 67
Query: 188 HINVIKLEGLV---TSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGL 244
H N+I + + + +Y++ E M+ DL + S L S+ ++ ++ Q L +
Sbjct: 68 HENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQML--SDDHIQYFIYQTLRAV 125
Query: 245 DHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYD---PDQNQP------LTSRVVT 295
H V+HRD+K SNLLI++N LK+ DFGLA D D ++P +T V T
Sbjct: 126 KVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVAT 185
Query: 296 LWYRPPELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSP-SE 354
WYR PE++L + Y A+D+WS GCILAEL+ +PI PGR QL IF + G+P S+
Sbjct: 186 RWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSD 245
Query: 355 DYWRKSKLPHATIFKPQQPYKRC--VAETFKDFPAPALALMETLLSIDPADRGSAASALR 412
+ R + P A + P + + F + L++ +L DPA R +A AL
Sbjct: 246 NDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALE 305
Query: 413 SEFFTMKPLPCD-PSSLPKYPPSKEFD 438
+ P D P P P EFD
Sbjct: 306 HPYLQTYHDPNDEPEGEPIPPSFFEFD 332
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 145 bits (367), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 107/326 (32%), Positives = 156/326 (47%), Gaps = 15/326 (4%)
Query: 125 VPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILR 184
VP R ++ L +G G Y +V A D VA+KK+ + RE+ +L+
Sbjct: 20 VPER---YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 185 RLDHINVIKLEGLVTSRMSC----SLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQL 240
+ H NVI L + T S +YLV M DL + K ++ V+ + Q+
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 134
Query: 241 LCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRP 300
L GL + HS ++HRD+K SNL ++ + LKI D GLA D + +T V T WYR
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDAGLARHTDDE----MTGYVATRWYRA 190
Query: 301 PELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRK- 359
PE++L +Y VD+WS GCI+AEL G+ + PG ++QL I +L G+P + +K
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 250
Query: 360 -SKLPHATIFKPQQPYKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALRSEFFTM 418
S+ I Q K A F A+ L+E +L +D R +AA AL +F
Sbjct: 251 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
Query: 419 KPLPCDPSSLPKYPPSKEFDAKIRDE 444
P D Y S E + DE
Sbjct: 311 YHDPDDEPVADPYDQSFESRDLLIDE 336
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 145 bits (367), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 107/326 (32%), Positives = 156/326 (47%), Gaps = 15/326 (4%)
Query: 125 VPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILR 184
VP R ++ L +G G Y +V A D VA+KK+ + RE+ +L+
Sbjct: 20 VPER---YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 185 RLDHINVIKLEGLVTSRMSC----SLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQL 240
+ H NVI L + T S +YLV M DL + K ++ V+ + Q+
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 134
Query: 241 LCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRP 300
L GL + HS ++HRD+K SNL ++ + LKI D GLA D + +T V T WYR
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDRGLARHTDDE----MTGYVATRWYRA 190
Query: 301 PELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRK- 359
PE++L +Y VD+WS GCI+AEL G+ + PG ++QL I +L G+P + +K
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 250
Query: 360 -SKLPHATIFKPQQPYKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALRSEFFTM 418
S+ I Q K A F A+ L+E +L +D R +AA AL +F
Sbjct: 251 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
Query: 419 KPLPCDPSSLPKYPPSKEFDAKIRDE 444
P D Y S E + DE
Sbjct: 311 YHDPDDEPVADPYDQSFESRDLLIDE 336
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 145 bits (366), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 109/327 (33%), Positives = 162/327 (49%), Gaps = 21/327 (6%)
Query: 129 ADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVR-FDNLEPESVRFMAREIHILRRLD 187
+ F+ +G+G Y V A +IVA+KK+ FD +P REI IL+
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFD--KPLFALRTLREIKILKHFK 67
Query: 188 HINVIKLEGLV---TSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGL 244
H N+I + + + +Y++ E M+ DL + S L S+ ++ ++ Q L +
Sbjct: 68 HENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQML--SDDHIQYFIYQTLRAV 125
Query: 245 DHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYD---PDQNQP------LTSRVVT 295
H V+HRD+K SNLLI++N LK+ DFGLA D D ++P +T V T
Sbjct: 126 KVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVAT 185
Query: 296 LWYRPPELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSP-SE 354
WYR PE++L + Y A+D+WS GCILAEL+ +PI PGR QL IF + G+P S+
Sbjct: 186 RWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSD 245
Query: 355 DYWRKSKLPHATIFKPQQPYKRC--VAETFKDFPAPALALMETLLSIDPADRGSAASALR 412
+ R + P A + P + + F + L++ +L DPA R +A AL
Sbjct: 246 NDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALE 305
Query: 413 SEFFTMKPLPCD-PSSLPKYPPSKEFD 438
+ P D P P P EFD
Sbjct: 306 HPYLQTYHDPNDEPEGEPIPPSFFEFD 332
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 145 bits (366), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 107/326 (32%), Positives = 156/326 (47%), Gaps = 15/326 (4%)
Query: 125 VPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILR 184
VP R ++ L +G G Y +V A D VA+KK+ + RE+ +L+
Sbjct: 20 VPER---YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 185 RLDHINVIKLEGLVTSRMSC----SLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQL 240
+ H NVI L + T S +YLV M DL + K ++ V+ + Q+
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 134
Query: 241 LCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRP 300
L GL + HS ++HRD+K SNL ++ + LKI D GLA D + +T V T WYR
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDGGLARHTDDE----MTGYVATRWYRA 190
Query: 301 PELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRK- 359
PE++L +Y VD+WS GCI+AEL G+ + PG ++QL I +L G+P + +K
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 250
Query: 360 -SKLPHATIFKPQQPYKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALRSEFFTM 418
S+ I Q K A F A+ L+E +L +D R +AA AL +F
Sbjct: 251 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
Query: 419 KPLPCDPSSLPKYPPSKEFDAKIRDE 444
P D Y S E + DE
Sbjct: 311 YHDPDDEPVADPYDQSFESRDLLIDE 336
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 93/291 (31%), Positives = 145/291 (49%), Gaps = 12/291 (4%)
Query: 132 FEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINV 191
+ L +G G Y V A D VA+KK+ + RE+ +L+ + H NV
Sbjct: 27 YRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENV 86
Query: 192 IKLEGLVTSRMS----CSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHC 247
I L + T + YLV +M DL L H K E +++ + Q+L GL +
Sbjct: 87 IGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHE--KLGEDRIQFLVYQMLKGLRYI 144
Query: 248 HSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGA 307
H+ G++HRD+K NL ++ + LKI DFGLA D + + VVT WYR PE++L
Sbjct: 145 HAAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSE----MXGXVVTRWYRAPEVILNW 200
Query: 308 TYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSKLPHATI 367
Y VD+WS GCI+AE+ GK + G ++QL +I K+ G+P ++ ++ + A
Sbjct: 201 MRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKN 260
Query: 368 FKPQQP--YKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALRSEFF 416
+ P K+ A + A+ L+E +L +D R +A AL +F
Sbjct: 261 YMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYF 311
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 108/324 (33%), Positives = 160/324 (49%), Gaps = 21/324 (6%)
Query: 132 FEKLDKIGQGTYSNVYRARDLDQKKIVALKKVR-FDNLEPESVRFMAREIHILRRLDHIN 190
F+ +G+G Y V A +IVA+KK+ FD +P REI IL+ H N
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFD--KPLFALRTLREIKILKHFKHEN 70
Query: 191 VIKLEGLV---TSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHC 247
+I + + + +Y++ E M+ DL + S L S+ ++ ++ Q L +
Sbjct: 71 IITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQML--SDDHIQYFIYQTLRAVKVL 128
Query: 248 HSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYD---PDQNQP------LTSRVVTLWY 298
H V+HRD+K SNLLI++N LK+ DFGLA D D ++P + V T WY
Sbjct: 129 HGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWY 188
Query: 299 RPPELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSP-SEDYW 357
R PE++L + Y A+D+WS GCILAEL+ +PI PGR QL IF + G+P S++
Sbjct: 189 RAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDL 248
Query: 358 RKSKLPHATIFKPQQPYKRC--VAETFKDFPAPALALMETLLSIDPADRGSAASALRSEF 415
R + P A + P + + F + L++ +L DPA R +A AL +
Sbjct: 249 RCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPY 308
Query: 416 FTMKPLPCD-PSSLPKYPPSKEFD 438
P D P P P EFD
Sbjct: 309 LQTYHDPNDEPEGEPIPPSFFEFD 332
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 102/332 (30%), Positives = 164/332 (49%), Gaps = 29/332 (8%)
Query: 132 FEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINV 191
+++L IG G V A D VA+KK+ + RE+ +L+ ++H N+
Sbjct: 24 YQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNI 83
Query: 192 IKLEGLVTSRMSCS----LYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHC 247
I L + T + + +YLV E M+ A L ++ ++ + Q+LCG+ H
Sbjct: 84 ISLLNVFTPQKTLEEFQDVYLVMELMD---ANLCQVIHMELDHERMSYLLYQMLCGIKHL 140
Query: 248 HSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGA 307
HS G++HRD+K SN+++ ++ LKI DFGLA N +T VVT +YR PE++LG
Sbjct: 141 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TASTNFMMTPYVVTRYYRAPEVILGM 198
Query: 308 TYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSKLPHATI 367
Y VD+WS GCI+ EL G I G ++Q +K+ + G+PS ++ + P
Sbjct: 199 G-YKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMAALQ-PTVRN 256
Query: 368 FKPQQPYKRCVA--ETFKDFPAP------------ALALMETLLSIDPADRGSAASALRS 413
+ +P +A E F D+ P A L+ +L IDP R S ALR
Sbjct: 257 YVENRPAYPGIAFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKRISVDEALRH 316
Query: 414 EFFTMKPLPCDPSSLPKYPPSKEFDAKIRDEE 445
+ T+ P + + PP + +DA++ + E
Sbjct: 317 PYITVWYDPAEAEA----PPPQIYDAQLEERE 344
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 101/346 (29%), Positives = 173/346 (50%), Gaps = 24/346 (6%)
Query: 132 FEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINV 191
++ L IG G V A D ++ VA+KK+ + RE+ +++ ++H N+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNI 85
Query: 192 IKLEGLVTSRMSCS----LYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHC 247
I L + T + S +Y+V E M+ +L+ + ++ ++ + Q+LCG+ H
Sbjct: 86 IGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQ---MELDHERMSYLLYQMLCGIKHL 142
Query: 248 HSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGA 307
HS G++HRD+K SN+++ ++ LKI DFGLA + +T VVT +YR PE++LG
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGM 200
Query: 308 TYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSKLPHATI 367
Y VD+WS GCI+ E+ G + PG ++Q +K+ + G+PS ++ +K + T
Sbjct: 201 G-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTY 259
Query: 368 FKPQQPYK-RCVAETFKD--FPA----------PALALMETLLSIDPADRGSAASALRSE 414
+ + Y + F D FPA A L+ +L ID + R S AL+
Sbjct: 260 VENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP 319
Query: 415 FFTMKPLPCDPSSLPKYPPSKEFDAKIRDEEARRQGGSKGQRMDLE 460
+ + P + + P P K+ D + E ++ K + MDLE
Sbjct: 320 YINVWYDPSEAEAPPPKIPDKQLDEREHTIEEWKELIYK-EVMDLE 364
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 101/346 (29%), Positives = 173/346 (50%), Gaps = 24/346 (6%)
Query: 132 FEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINV 191
++ L IG G V A D ++ VA+KK+ + RE+ +++ ++H N+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 192 IKLEGLVTSRMSCS----LYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHC 247
I L + T + S +Y+V E M+ +L+ + ++ ++ + Q+LCG+ H
Sbjct: 86 IGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQ---MELDHERMSYLLYQMLCGIKHL 142
Query: 248 HSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGA 307
HS G++HRD+K SN+++ ++ LKI DFGLA + +T VVT +YR PE++LG
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGM 200
Query: 308 TYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSKLPHATI 367
Y VD+WS GCI+ E+ G + PG ++Q +K+ + G+PS ++ +K + T
Sbjct: 201 G-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTY 259
Query: 368 FKPQQPYK-RCVAETFKD--FPA----------PALALMETLLSIDPADRGSAASALRSE 414
+ + Y + F D FPA A L+ +L ID + R S AL+
Sbjct: 260 VENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP 319
Query: 415 FFTMKPLPCDPSSLPKYPPSKEFDAKIRDEEARRQGGSKGQRMDLE 460
+ + P + + P P K+ D + E ++ K + MDLE
Sbjct: 320 YINVWYDPSEAEAPPPKIPDKQLDEREHTIEEWKELIYK-EVMDLE 364
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 101/332 (30%), Positives = 165/332 (49%), Gaps = 29/332 (8%)
Query: 132 FEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINV 191
+++L IG G V A D VA+KK+ + RE+ +L+ ++H N+
Sbjct: 26 YQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNI 85
Query: 192 IKLEGLVTSRMSCS----LYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHC 247
I L + T + + +YLV E M+ A L ++ ++ + Q+LCG+ H
Sbjct: 86 ISLLNVFTPQKTLEEFQDVYLVMELMD---ANLCQVIHMELDHERMSYLLYQMLCGIKHL 142
Query: 248 HSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGA 307
HS G++HRD+K SN+++ ++ LKI DFGLA N +T VVT +YR PE++LG
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TACTNFMMTPYVVTRYYRAPEVILGM 200
Query: 308 TYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYW--RKSKLPHA 365
Y VD+WS GCI+ EL G I G ++Q +K+ + G+PS ++ + + +
Sbjct: 201 G-YAANVDIWSVGCIMGELVKGCVIFQGTDHIDQWNKVIEQLGTPSAEFMAALQPTVRNY 259
Query: 366 TIFKPQQPYKRCVAETFKDFPAP------------ALALMETLLSIDPADRGSAASALRS 413
+P+ P + E F D+ P A L+ +L IDP R S ALR
Sbjct: 260 VENRPKYPGIK-FEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKRISVDEALRH 318
Query: 414 EFFTMKPLPCDPSSLPKYPPSKEFDAKIRDEE 445
+ T+ P + + PP + +DA++ + E
Sbjct: 319 PYITVWYDPAEAEA----PPPQIYDAQLEERE 346
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 107/353 (30%), Positives = 166/353 (47%), Gaps = 71/353 (20%)
Query: 130 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVR--FDNLEPESVRFMAREIHILRRLD 187
D +E IG G+Y +V A D +K++VA+KK+ F++L + + REI IL RL+
Sbjct: 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLI--DCKRILREIAILNRLN 110
Query: 188 HINVIKLEGLVTSR---MSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGL 244
H +V+K+ +V + LY+V E + D L P + +E +K + LL G+
Sbjct: 111 HDHVVKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFRTP-VYLTELHIKTLLYNLLVGV 169
Query: 245 DHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQN------------------ 286
+ HS G+LHRD+K +N L++ + +K+ DFGLA D +N
Sbjct: 170 KYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVT 229
Query: 287 --------QPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAEL----------YA 328
+ LT VVT WYR PEL+L Y A+D+WS GCI AEL +A
Sbjct: 230 FPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYHA 289
Query: 329 GK-PIMPG--------------------RTEVEQLHKIFKLCGSPSED----YWRKSKLP 363
+ P+ PG R +QL+ IF + G+PSE+ ++
Sbjct: 290 DRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKR 349
Query: 364 HATIFKPQQPYKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALRSEFF 416
+ IF ++ +AE F A A+ L++ +L +P R + L FF
Sbjct: 350 YIRIFPKREGTD--LAERFPASSADAIHLLKRMLVFNPNKRITINECLAHPFF 400
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 101/346 (29%), Positives = 173/346 (50%), Gaps = 24/346 (6%)
Query: 132 FEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINV 191
++ L IG G V A D ++ VA+KK+ + RE+ +++ ++H N+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 192 IKLEGLVTSRMSCS----LYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHC 247
I L + T + S +Y+V E M+ +L+ + ++ ++ + Q+LCG+ H
Sbjct: 86 IGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQ---MELDHERMSYLLYQMLCGIKHL 142
Query: 248 HSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGA 307
HS G++HRD+K SN+++ ++ LKI DFGLA + +T VVT +YR PE++LG
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGM 200
Query: 308 TYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSKLPHATI 367
Y VD+WS GCI+ E+ G + PG ++Q +K+ + G+PS ++ +K + T
Sbjct: 201 G-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTY 259
Query: 368 FKPQQPYK-RCVAETFKD--FPA----------PALALMETLLSIDPADRGSAASALRSE 414
+ + Y + F D FPA A L+ +L ID + R S AL+
Sbjct: 260 VENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP 319
Query: 415 FFTMKPLPCDPSSLPKYPPSKEFDAKIRDEEARRQGGSKGQRMDLE 460
+ + P + + P P K+ D + E ++ K + MDLE
Sbjct: 320 YINVWYDPSEAEAPPPKIPDKQLDEREHTIEEWKELIYK-EVMDLE 364
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 139 bits (351), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 102/346 (29%), Positives = 172/346 (49%), Gaps = 24/346 (6%)
Query: 132 FEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINV 191
++ L IG G V A D ++ VA+KK+ + RE+ +++ ++H N+
Sbjct: 31 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 90
Query: 192 IKLEGLVTSRMSCS----LYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHC 247
I L + T + S +Y+V E M+ +L + ++ ++ + Q+LCG+ H
Sbjct: 91 IGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ---MELDHERMSYLLYQMLCGIKHL 147
Query: 248 HSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGA 307
HS G++HRD+K SN+++ ++ LKI DFGLA + +T VVT +YR PE++LG
Sbjct: 148 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGM 205
Query: 308 TYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSKLPHATI 367
Y VDLWS GCI+ E+ K + PGR ++Q +K+ + G+P ++ +K + T
Sbjct: 206 G-YKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRTY 264
Query: 368 FKPQQPYK-RCVAETFKD--FPA----------PALALMETLLSIDPADRGSAASALRSE 414
+ + Y + F D FPA A L+ +L ID + R S AL+
Sbjct: 265 VENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP 324
Query: 415 FFTMKPLPCDPSSLPKYPPSKEFDAKIRDEEARRQGGSKGQRMDLE 460
+ + P + + P P K+ D + E ++ K + MDLE
Sbjct: 325 YINVWYDPSEAEAPPPKIPDKQLDEREHTIEEWKELIYK-EVMDLE 369
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 139 bits (349), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 104/365 (28%), Positives = 177/365 (48%), Gaps = 25/365 (6%)
Query: 132 FEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINV 191
++ L IG G V A D ++ VA+KK+ + RE+ +++ ++H N+
Sbjct: 28 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 87
Query: 192 IKLEGLVTSRMSCS----LYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHC 247
I L + T + S +Y+V E M+ +L + ++ ++ + Q+LCG+ H
Sbjct: 88 IGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ---MELDHERMSYLLYQMLCGIKHL 144
Query: 248 HSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGA 307
HS G++HRD+K SN+++ ++ LKI DFGLA + + VVT +YR PE++LG
Sbjct: 145 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMVPFVVTRYYRAPEVILGM 202
Query: 308 TYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSKLPHATI 367
Y VD+WS GCI+ E+ G + PG ++Q +K+ + G+P ++ +K + T
Sbjct: 203 G-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTY 261
Query: 368 FKPQQPYK-RCVAETFKD--FPA----------PALALMETLLSIDPADRGSAASALRSE 414
+ + Y + F D FPA A L+ +L ID + R S AL+
Sbjct: 262 VENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP 321
Query: 415 FFTMKPLPCDPSSLPKYPPSKEFDAKIRDEEARRQGGSKGQRMDLERRGTRES-RAIPAP 473
+ + P + + P P K+ D + E ++ K + MDLE R R P+P
Sbjct: 322 YINVWYDPSEAEAPPPKIPDKQLDEREHTIEEWKELIYK-EVMDLEERTKNGVIRGQPSP 380
Query: 474 DANAE 478
A +
Sbjct: 381 LAQVQ 385
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 139 bits (349), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 102/346 (29%), Positives = 172/346 (49%), Gaps = 24/346 (6%)
Query: 132 FEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINV 191
++ L IG G V A D ++ VA+KK+ + RE+ +++ ++H N+
Sbjct: 20 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 79
Query: 192 IKLEGLVTSRMSCS----LYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHC 247
I L + T + S +Y+V E M+ +L + ++ ++ + Q+LCG+ H
Sbjct: 80 IGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ---MELDHERMSYLLYQMLCGIKHL 136
Query: 248 HSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGA 307
HS G++HRD+K SN+++ ++ LKI DFGLA + +T VVT +YR PE++LG
Sbjct: 137 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGM 194
Query: 308 TYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSKLPHATI 367
Y VDLWS GCI+ E+ K + PGR ++Q +K+ + G+P ++ +K + T
Sbjct: 195 G-YKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRTY 253
Query: 368 FKPQQPYK-RCVAETFKD--FPA----------PALALMETLLSIDPADRGSAASALRSE 414
+ + Y + F D FPA A L+ +L ID + R S AL+
Sbjct: 254 VENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP 313
Query: 415 FFTMKPLPCDPSSLPKYPPSKEFDAKIRDEEARRQGGSKGQRMDLE 460
+ + P + + P P K+ D + E ++ K + MDLE
Sbjct: 314 YINVWYDPSEAEAPPPKIPDKQLDEREHTIEEWKELIYK-EVMDLE 358
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 139 bits (349), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 101/346 (29%), Positives = 172/346 (49%), Gaps = 24/346 (6%)
Query: 132 FEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINV 191
++ L IG G V A D ++ VA+KK+ + RE+ +++ ++H N+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 192 IKLEGLVTSRMSCS----LYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHC 247
I L + T + S +Y+V E M+ +L + ++ ++ + Q+LCG+ H
Sbjct: 86 IGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ---MELDHERMSYLLYQMLCGIKHL 142
Query: 248 HSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGA 307
HS G++HRD+K SN+++ ++ LKI DFGLA + +T VVT +YR PE++LG
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGM 200
Query: 308 TYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSKLPHATI 367
Y VD+WS GCI+ E+ G + PG ++Q +K+ + G+PS ++ +K + T
Sbjct: 201 G-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTY 259
Query: 368 FKPQQPYK-RCVAETFKD--FPA----------PALALMETLLSIDPADRGSAASALRSE 414
+ + Y + F D FPA A L+ +L ID + R S AL+
Sbjct: 260 VENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP 319
Query: 415 FFTMKPLPCDPSSLPKYPPSKEFDAKIRDEEARRQGGSKGQRMDLE 460
+ + P + + P P K+ D + E ++ K + MDLE
Sbjct: 320 YINVWYDPSEAEAPPPKIPDKQLDEREHTIEEWKELIYK-EVMDLE 364
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 139 bits (349), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 101/350 (28%), Positives = 173/350 (49%), Gaps = 24/350 (6%)
Query: 132 FEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINV 191
++ L IG G V A D ++ VA+KK+ + RE+ +++ ++H N+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 192 IKLEGLVTSRMSCS----LYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHC 247
I L + T + S +Y+V E M+ +L + ++ ++ + Q+LCG+ H
Sbjct: 86 IGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ---MELDHERMSYLLYQMLCGIKHL 142
Query: 248 HSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGA 307
HS G++HRD+K SN+++ ++ LKI DFGLA + +T VVT +YR PE++LG
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPEVVTRYYRAPEVILGM 200
Query: 308 TYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSKLPHATI 367
Y VD+WS GCI+ E+ G + PG ++Q +K+ + G+P ++ +K + T
Sbjct: 201 G-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTY 259
Query: 368 FKPQQPYK-RCVAETFKD--FPA----------PALALMETLLSIDPADRGSAASALRSE 414
+ + Y + F D FPA A L+ +L ID + R S AL+
Sbjct: 260 VENRPKYAGYSFEKLFPDVLFPADSEHNALKASQARDLLSKMLVIDASKRISVDEALQHP 319
Query: 415 FFTMKPLPCDPSSLPKYPPSKEFDAKIRDEEARRQGGSKGQRMDLERRGT 464
+ + P + + P P K+ D + E ++ K + MDL +R T
Sbjct: 320 YINVWYDPSEAEAPPPKIPDKQLDEREHTIEEWKELIYK-EVMDLPKRPT 368
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 100/346 (28%), Positives = 172/346 (49%), Gaps = 24/346 (6%)
Query: 132 FEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINV 191
++ L IG G V A D ++ VA+KK+ + RE+ +++ ++H N+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNI 85
Query: 192 IKLEGLVTSRMSCS----LYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHC 247
I L + T + S +Y+V E M+ +L+ + ++ ++ + Q+L G+ H
Sbjct: 86 IGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQ---MELDHERMSYLLYQMLVGIKHL 142
Query: 248 HSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGA 307
HS G++HRD+K SN+++ ++ LKI DFGLA + +T VVT +YR PE++LG
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGM 200
Query: 308 TYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSKLPHATI 367
Y VD+WS GCI+ E+ G + PG ++Q +K+ + G+PS ++ +K + T
Sbjct: 201 G-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTY 259
Query: 368 FKPQQPYK-RCVAETFKD--FPA----------PALALMETLLSIDPADRGSAASALRSE 414
+ + Y + F D FPA A L+ +L ID + R S AL+
Sbjct: 260 VENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP 319
Query: 415 FFTMKPLPCDPSSLPKYPPSKEFDAKIRDEEARRQGGSKGQRMDLE 460
+ + P + + P P K+ D + E ++ K + MDLE
Sbjct: 320 YINVWYDPSEAEAPPPKIPDKQLDEREHTIEEWKELIYK-EVMDLE 364
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 98/332 (29%), Positives = 169/332 (50%), Gaps = 29/332 (8%)
Query: 132 FEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINV 191
++ L IG G V A D + VA+KK+ + RE+ +++ ++H N+
Sbjct: 64 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 123
Query: 192 IKLEGLVTSRMSCS----LYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHC 247
I L + T + + +YLV E M+ +L + ++ ++ + Q+LCG+ H
Sbjct: 124 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ---MELDHERMSYLLYQMLCGIKHL 180
Query: 248 HSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGA 307
HS G++HRD+K SN+++ ++ LKI DFGLA + +T VVT +YR PE++LG
Sbjct: 181 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGM 238
Query: 308 TYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSKLPHATI 367
Y VD+WS GCI+ E+ K + PGR ++Q +K+ + G+P ++ +K + P
Sbjct: 239 G-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ-PTVRN 296
Query: 368 FKPQQPYKRCVA--ETFKD--FPA----------PALALMETLLSIDPADRGSAASALRS 413
+ +P + + F D FPA A L+ +L IDPA R S AL+
Sbjct: 297 YVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 356
Query: 414 EFFTMKPLPCDPSSLPKYPPSKEFDAKIRDEE 445
+ + DP+ + + PP + +D ++ + E
Sbjct: 357 PYINVW---YDPAEV-EAPPPQIYDKQLDERE 384
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 98/332 (29%), Positives = 169/332 (50%), Gaps = 29/332 (8%)
Query: 132 FEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINV 191
++ L IG G V A D + VA+KK+ + RE+ +++ ++H N+
Sbjct: 64 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 123
Query: 192 IKLEGLVTSRMSCS----LYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHC 247
I L + T + + +YLV E M+ +L + ++ ++ + Q+LCG+ H
Sbjct: 124 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ---MELDHERMSYLLYQMLCGIKHL 180
Query: 248 HSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGA 307
HS G++HRD+K SN+++ ++ LKI DFGLA + +T VVT +YR PE++LG
Sbjct: 181 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGM 238
Query: 308 TYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSKLPHATI 367
Y VD+WS GCI+ E+ K + PGR ++Q +K+ + G+P ++ +K + P
Sbjct: 239 G-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ-PTVRN 296
Query: 368 FKPQQPYKRCVA--ETFKD--FPA----------PALALMETLLSIDPADRGSAASALRS 413
+ +P + + F D FPA A L+ +L IDPA R S AL+
Sbjct: 297 YVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 356
Query: 414 EFFTMKPLPCDPSSLPKYPPSKEFDAKIRDEE 445
+ + DP+ + + PP + +D ++ + E
Sbjct: 357 PYINVW---YDPAEV-EAPPPQIYDKQLDERE 384
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 98/332 (29%), Positives = 169/332 (50%), Gaps = 29/332 (8%)
Query: 132 FEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINV 191
++ L IG G V A D + VA+KK+ + RE+ +++ ++H N+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 192 IKLEGLVTSRMSCS----LYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHC 247
I L + T + + +YLV E M+ +L + ++ ++ + Q+LCG+ H
Sbjct: 86 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ---MELDHERMSYLLYQMLCGIKHL 142
Query: 248 HSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGA 307
HS G++HRD+K SN+++ ++ LKI DFGLA + +T VVT +YR PE++LG
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGM 200
Query: 308 TYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSKLPHATI 367
Y VD+WS GCI+ E+ K + PGR ++Q +K+ + G+P ++ +K + P
Sbjct: 201 G-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ-PTVRN 258
Query: 368 FKPQQPYKRCVA--ETFKD--FPA----------PALALMETLLSIDPADRGSAASALRS 413
+ +P + + F D FPA A L+ +L IDPA R S AL+
Sbjct: 259 YVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 318
Query: 414 EFFTMKPLPCDPSSLPKYPPSKEFDAKIRDEE 445
+ + DP+ + + PP + +D ++ + E
Sbjct: 319 PYINVW---YDPAEV-EAPPPQIYDKQLDERE 346
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 98/332 (29%), Positives = 169/332 (50%), Gaps = 29/332 (8%)
Query: 132 FEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINV 191
++ L IG G V A D + VA+KK+ + RE+ +++ ++H N+
Sbjct: 27 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 86
Query: 192 IKLEGLVTSRMSCS----LYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHC 247
I L + T + + +YLV E M+ +L + ++ ++ + Q+LCG+ H
Sbjct: 87 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ---MELDHERMSYLLYQMLCGIKHL 143
Query: 248 HSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGA 307
HS G++HRD+K SN+++ ++ LKI DFGLA + +T VVT +YR PE++LG
Sbjct: 144 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGM 201
Query: 308 TYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSKLPHATI 367
Y VD+WS GCI+ E+ K + PGR ++Q +K+ + G+P ++ +K + P
Sbjct: 202 G-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ-PTVRN 259
Query: 368 FKPQQPYKRCVA--ETFKD--FPA----------PALALMETLLSIDPADRGSAASALRS 413
+ +P + + F D FPA A L+ +L IDPA R S AL+
Sbjct: 260 YVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 319
Query: 414 EFFTMKPLPCDPSSLPKYPPSKEFDAKIRDEE 445
+ + DP+ + + PP + +D ++ + E
Sbjct: 320 PYINVW---YDPAEV-EAPPPQIYDKQLDERE 347
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 101/346 (29%), Positives = 171/346 (49%), Gaps = 24/346 (6%)
Query: 132 FEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINV 191
++ L IG G V A D ++ VA+KK+ + RE+ +++ ++H N+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 192 IKLEGLVTSRMSCS----LYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHC 247
I L + T + S +Y+V E M+ +L + ++ ++ + Q+LCG+ H
Sbjct: 86 IGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ---MELDHERMSYLLYQMLCGIKHL 142
Query: 248 HSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGA 307
HS G++HRD+K SN+++ ++ LKI DFGLA + + VVT +YR PE++LG
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMEPEVVTRYYRAPEVILGM 200
Query: 308 TYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSKLPHATI 367
Y VDLWS GCI+ E+ K + PGR ++Q +K+ + G+P ++ +K + T
Sbjct: 201 G-YKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRTY 259
Query: 368 FKPQQPYK-RCVAETFKD--FPA----------PALALMETLLSIDPADRGSAASALRSE 414
+ + Y + F D FPA A L+ +L ID + R S AL+
Sbjct: 260 VENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP 319
Query: 415 FFTMKPLPCDPSSLPKYPPSKEFDAKIRDEEARRQGGSKGQRMDLE 460
+ + P + + P P K+ D + E ++ K + MDLE
Sbjct: 320 YINVWYDPSEAEAPPPKIPDKQLDEREHTIEEWKELIYK-EVMDLE 364
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 98/332 (29%), Positives = 169/332 (50%), Gaps = 29/332 (8%)
Query: 132 FEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINV 191
++ L IG G V A D + VA+KK+ + RE+ +++ ++H N+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 192 IKLEGLVTSRMSCS----LYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHC 247
I L + T + + +YLV E M+ +L + ++ ++ + Q+LCG+ H
Sbjct: 86 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ---MELDHERMSYLLYQMLCGIKHL 142
Query: 248 HSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGA 307
HS G++HRD+K SN+++ ++ LKI DFGLA + +T VVT +YR PE++LG
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGM 200
Query: 308 TYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSKLPHATI 367
Y VD+WS GCI+ E+ K + PGR ++Q +K+ + G+P ++ +K + P
Sbjct: 201 G-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ-PTVRN 258
Query: 368 FKPQQPYKRCVA--ETFKD--FPA----------PALALMETLLSIDPADRGSAASALRS 413
+ +P + + F D FPA A L+ +L IDPA R S AL+
Sbjct: 259 YVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 318
Query: 414 EFFTMKPLPCDPSSLPKYPPSKEFDAKIRDEE 445
+ + DP+ + + PP + +D ++ + E
Sbjct: 319 PYINVW---YDPAEV-EAPPPQIYDKQLDERE 346
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 100/346 (28%), Positives = 171/346 (49%), Gaps = 24/346 (6%)
Query: 132 FEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINV 191
++ L IG G V A D ++ VA+KK+ + RE+ +++ ++H N+
Sbjct: 27 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 86
Query: 192 IKLEGLVTSRMSCS----LYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHC 247
I L + T + S +Y+V E M+ +L + ++ ++ + Q+LCG+ H
Sbjct: 87 IGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ---MELDHERMSYLLYQMLCGIKHL 143
Query: 248 HSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGA 307
HS G++HRD+K SN+++ ++ LKI DFGLA + +T VVT +YR PE++LG
Sbjct: 144 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGM 201
Query: 308 TYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSKLPHATI 367
Y VD+WS GCI+ E+ G + PG ++Q +K+ + G+P ++ +K + T
Sbjct: 202 G-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTY 260
Query: 368 FKPQQPYK-RCVAETFKD--FPA----------PALALMETLLSIDPADRGSAASALRSE 414
+ + Y + F D FPA A L+ +L ID + R S AL+
Sbjct: 261 VENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP 320
Query: 415 FFTMKPLPCDPSSLPKYPPSKEFDAKIRDEEARRQGGSKGQRMDLE 460
+ + P + + P P K+ D + E ++ K + MDLE
Sbjct: 321 YINVWYDPSEAEAPPPKIPDKQLDEREHTIEEWKELIYK-EVMDLE 365
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 98/332 (29%), Positives = 169/332 (50%), Gaps = 29/332 (8%)
Query: 132 FEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINV 191
++ L IG G V A D + VA+KK+ + RE+ +++ ++H N+
Sbjct: 25 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 84
Query: 192 IKLEGLVTSRMSCS----LYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHC 247
I L + T + + +YLV E M+ +L + ++ ++ + Q+LCG+ H
Sbjct: 85 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ---MELDHERMSYLLYQMLCGIKHL 141
Query: 248 HSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGA 307
HS G++HRD+K SN+++ ++ LKI DFGLA + +T VVT +YR PE++LG
Sbjct: 142 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGM 199
Query: 308 TYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSKLPHATI 367
Y VD+WS GCI+ E+ K + PGR ++Q +K+ + G+P ++ +K + P
Sbjct: 200 G-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ-PTVRN 257
Query: 368 FKPQQPYKRCVA--ETFKD--FPA----------PALALMETLLSIDPADRGSAASALRS 413
+ +P + + F D FPA A L+ +L IDPA R S AL+
Sbjct: 258 YVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 317
Query: 414 EFFTMKPLPCDPSSLPKYPPSKEFDAKIRDEE 445
+ + DP+ + + PP + +D ++ + E
Sbjct: 318 PYINVW---YDPAEV-EAPPPQIYDKQLDERE 345
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 98/332 (29%), Positives = 169/332 (50%), Gaps = 29/332 (8%)
Query: 132 FEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINV 191
++ L IG G V A D + VA+KK+ + RE+ +++ ++H N+
Sbjct: 27 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 86
Query: 192 IKLEGLVTSRMSCS----LYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHC 247
I L + T + + +YLV E M+ +L + ++ ++ + Q+LCG+ H
Sbjct: 87 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ---MELDHERMSYLLYQMLCGIKHL 143
Query: 248 HSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGA 307
HS G++HRD+K SN+++ ++ LKI DFGLA + +T VVT +YR PE++LG
Sbjct: 144 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGM 201
Query: 308 TYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSKLPHATI 367
Y VD+WS GCI+ E+ K + PGR ++Q +K+ + G+P ++ +K + P
Sbjct: 202 G-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ-PTVRN 259
Query: 368 FKPQQPYKRCVA--ETFKD--FPA----------PALALMETLLSIDPADRGSAASALRS 413
+ +P + + F D FPA A L+ +L IDPA R S AL+
Sbjct: 260 YVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 319
Query: 414 EFFTMKPLPCDPSSLPKYPPSKEFDAKIRDEE 445
+ + DP+ + + PP + +D ++ + E
Sbjct: 320 PYINVW---YDPAEV-EAPPPQIYDKQLDERE 347
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 98/332 (29%), Positives = 169/332 (50%), Gaps = 29/332 (8%)
Query: 132 FEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINV 191
++ L IG G V A D + VA+KK+ + RE+ +++ ++H N+
Sbjct: 20 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 79
Query: 192 IKLEGLVTSRMSCS----LYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHC 247
I L + T + + +YLV E M+ +L + ++ ++ + Q+LCG+ H
Sbjct: 80 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ---MELDHERMSYLLYQMLCGIKHL 136
Query: 248 HSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGA 307
HS G++HRD+K SN+++ ++ LKI DFGLA + +T VVT +YR PE++LG
Sbjct: 137 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGM 194
Query: 308 TYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSKLPHATI 367
Y VD+WS GCI+ E+ K + PGR ++Q +K+ + G+P ++ +K + P
Sbjct: 195 G-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ-PTVRN 252
Query: 368 FKPQQPYKRCVA--ETFKD--FPA----------PALALMETLLSIDPADRGSAASALRS 413
+ +P + + F D FPA A L+ +L IDPA R S AL+
Sbjct: 253 YVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 312
Query: 414 EFFTMKPLPCDPSSLPKYPPSKEFDAKIRDEE 445
+ + DP+ + + PP + +D ++ + E
Sbjct: 313 PYINVW---YDPAEV-EAPPPQIYDKQLDERE 340
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 98/332 (29%), Positives = 169/332 (50%), Gaps = 29/332 (8%)
Query: 132 FEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINV 191
++ L IG G V A D + VA+KK+ + RE+ +++ ++H N+
Sbjct: 20 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 79
Query: 192 IKLEGLVTSRMSCS----LYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHC 247
I L + T + + +YLV E M+ +L + ++ ++ + Q+LCG+ H
Sbjct: 80 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ---MELDHERMSYLLYQMLCGIKHL 136
Query: 248 HSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGA 307
HS G++HRD+K SN+++ ++ LKI DFGLA + +T VVT +YR PE++LG
Sbjct: 137 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGM 194
Query: 308 TYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSKLPHATI 367
Y VD+WS GCI+ E+ K + PGR ++Q +K+ + G+P ++ +K + P
Sbjct: 195 G-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ-PTVRN 252
Query: 368 FKPQQPYKRCVA--ETFKD--FPA----------PALALMETLLSIDPADRGSAASALRS 413
+ +P + + F D FPA A L+ +L IDPA R S AL+
Sbjct: 253 YVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 312
Query: 414 EFFTMKPLPCDPSSLPKYPPSKEFDAKIRDEE 445
+ + DP+ + + PP + +D ++ + E
Sbjct: 313 PYINVW---YDPAEV-EAPPPQIYDKQLDERE 340
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 98/332 (29%), Positives = 169/332 (50%), Gaps = 29/332 (8%)
Query: 132 FEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINV 191
++ L IG G V A D + VA+KK+ + RE+ +++ ++H N+
Sbjct: 19 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 78
Query: 192 IKLEGLVTSRMSCS----LYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHC 247
I L + T + + +YLV E M+ +L + ++ ++ + Q+LCG+ H
Sbjct: 79 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ---MELDHERMSYLLYQMLCGIKHL 135
Query: 248 HSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGA 307
HS G++HRD+K SN+++ ++ LKI DFGLA + +T VVT +YR PE++LG
Sbjct: 136 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGM 193
Query: 308 TYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSKLPHATI 367
Y VD+WS GCI+ E+ K + PGR ++Q +K+ + G+P ++ +K + P
Sbjct: 194 G-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ-PTVRN 251
Query: 368 FKPQQPYKRCVA--ETFKD--FPA----------PALALMETLLSIDPADRGSAASALRS 413
+ +P + + F D FPA A L+ +L IDPA R S AL+
Sbjct: 252 YVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 311
Query: 414 EFFTMKPLPCDPSSLPKYPPSKEFDAKIRDEE 445
+ + DP+ + + PP + +D ++ + E
Sbjct: 312 PYINVW---YDPAEV-EAPPPQIYDKQLDERE 339
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 136 bits (342), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 97/330 (29%), Positives = 156/330 (47%), Gaps = 59/330 (17%)
Query: 138 IGQGTYSNVYRARDLDQKKIVALKKVR--FDNLEPESVRFMAREIHILRRLDHINVIKLE 195
IG+G+Y VY A D + +K VA+KKV F++L + + REI IL RL +I+L
Sbjct: 34 IGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLI--DCKRILREITILNRLKSDYIIRLY 91
Query: 196 GLVTSRMSC---SLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGV 252
L+ LY+V E + DL L P + +E +K + LL G + H G+
Sbjct: 92 DLIIPDDLLKFDELYIVLEIADSDLKKLFKTP-IFLTEEHIKTILYNLLLGENFIHESGI 150
Query: 253 LHRDIKGSNLLIDNNGILKIADFGLASFYDPDQN---------------------QPLTS 291
+HRD+K +N L++ + +K+ DFGLA + +++ + LTS
Sbjct: 151 IHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTS 210
Query: 292 RVVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYAGK-----------PIMPG----- 335
VVT WYR PEL+L Y ++D+WSTGCI AEL P+ PG
Sbjct: 211 HVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPLFPGSSCFP 270
Query: 336 ------------RTEVEQLHKIFKLCGSPSEDYWRKSKLPHATIFKPQQPYKRCV--AET 381
++ +QL+ IF + G+P+ED + P + P+++ + +
Sbjct: 271 LSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQK 330
Query: 382 FKDFPAPALALMETLLSIDPADRGSAASAL 411
+ + L+E++L +P R + AL
Sbjct: 331 YPSISDDGINLLESMLKFNPNKRITIDQAL 360
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 135 bits (340), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 99/346 (28%), Positives = 171/346 (49%), Gaps = 24/346 (6%)
Query: 132 FEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINV 191
++ L IG G V A D ++ VA+KK+ + RE+ +++ ++H N+
Sbjct: 26 YQNLKPIGSGAQGIVVAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNI 85
Query: 192 IKLEGLVTSRMSCS----LYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHC 247
I L + T + S +Y+V E M+ +L+ + ++ ++ + Q+L G+ H
Sbjct: 86 IGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQ---MELDHERMSYLLYQMLVGIKHL 142
Query: 248 HSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGA 307
HS G++HRD+K SN+++ ++ LKI DFGLA + +T VVT +YR PE++LG
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGM 200
Query: 308 TYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSKLPHATI 367
Y VD+WS G I+ E+ G + PG ++Q +K+ + G+PS ++ +K + T
Sbjct: 201 G-YKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTY 259
Query: 368 FKPQQPYK-RCVAETFKD--FPA----------PALALMETLLSIDPADRGSAASALRSE 414
+ + Y + F D FPA A L+ +L ID + R S AL+
Sbjct: 260 VENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP 319
Query: 415 FFTMKPLPCDPSSLPKYPPSKEFDAKIRDEEARRQGGSKGQRMDLE 460
+ + P + + P P K+ D + E ++ K + MDLE
Sbjct: 320 YINVWYDPSEAEAPPPKIPDKQLDEREHTIEEWKELIYK-EVMDLE 364
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 135 bits (340), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 94/326 (28%), Positives = 162/326 (49%), Gaps = 23/326 (7%)
Query: 132 FEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINV 191
++ L IG G V A D ++ VA+KK+ + RE+ +++ ++H N+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 192 IKLEGLVTSRMSCS----LYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHC 247
I L + T + S +Y+V E M+ +L + ++ ++ + Q+LCG+ H
Sbjct: 86 IGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ---MELDHERMSYLLYQMLCGIKHL 142
Query: 248 HSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGA 307
HS G++HRD+K SN+++ ++ LKI DFGLA + +T VVT +YR PE++LG
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGM 200
Query: 308 TYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSKLPHATI 367
Y VD+WS GCI+ E+ G + PG ++Q +K+ + G+P ++ +K + T
Sbjct: 201 G-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTY 259
Query: 368 FKPQQPYK-RCVAETFKD--FPA----------PALALMETLLSIDPADRGSAASALRSE 414
+ + Y + F D FPA A L+ +L ID + R S AL+
Sbjct: 260 VENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP 319
Query: 415 FFTMKPLPCDPSSLPKYPPSKEFDAK 440
+ + P + + P P K+ D +
Sbjct: 320 YINVWYDPSEAEAPPPKIPDKQLDER 345
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 99/346 (28%), Positives = 171/346 (49%), Gaps = 24/346 (6%)
Query: 132 FEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINV 191
++ L IG G V A D ++ VA+KK+ + RE+ +++ ++H N+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNI 85
Query: 192 IKLEGLVTSRMSCS----LYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHC 247
I L + T + S +Y+V E M+ +L+ + ++ ++ + Q+L G+ H
Sbjct: 86 IGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQ---MELDHERMSYLLYQMLVGIKHL 142
Query: 248 HSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGA 307
HS G++HRD+K SN+++ ++ LKI DFGLA + +T VVT +YR PE++LG
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGM 200
Query: 308 TYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSKLPHATI 367
Y VD+WS G I+ E+ G + PG ++Q +K+ + G+PS ++ +K + T
Sbjct: 201 G-YKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTY 259
Query: 368 FKPQQPYK-RCVAETFKD--FPA----------PALALMETLLSIDPADRGSAASALRSE 414
+ + Y + F D FPA A L+ +L ID + R S AL+
Sbjct: 260 VENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP 319
Query: 415 FFTMKPLPCDPSSLPKYPPSKEFDAKIRDEEARRQGGSKGQRMDLE 460
+ + P + + P P K+ D + E ++ K + MDLE
Sbjct: 320 YINVWYDPSEAEAPPPKIPDKQLDEREHTIEEWKELIYK-EVMDLE 364
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 92/305 (30%), Positives = 155/305 (50%), Gaps = 25/305 (8%)
Query: 132 FEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINV 191
++ L IG G V A D + VA+KK+ + RE+ +++ ++H N+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNI 85
Query: 192 IKLEGLVTSRMSCS----LYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHC 247
I L + T + + +YLV E M+ +L + ++ ++ + Q+LCG+ H
Sbjct: 86 ISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQ---MELDHERMSYLLYQMLCGIKHL 142
Query: 248 HSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGA 307
HS G++HRD+K SN+++ ++ LKI DFGLA + +T VVT +YR PE++LG
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGM 200
Query: 308 TYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSKLPHATI 367
Y VD+WS GCI+ E+ K + PGR ++Q +K+ + G+P ++ +K + P
Sbjct: 201 G-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ-PTVRN 258
Query: 368 FKPQQPYKRCVA--ETFKD--FPA----------PALALMETLLSIDPADRGSAASALRS 413
+ +P + + F D FPA A L+ +L IDPA R S AL+
Sbjct: 259 YVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 318
Query: 414 EFFTM 418
+ +
Sbjct: 319 PYINV 323
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 92/305 (30%), Positives = 155/305 (50%), Gaps = 25/305 (8%)
Query: 132 FEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINV 191
++ L IG G V A D + VA+KK+ + RE+ +++ ++H N+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNI 85
Query: 192 IKLEGLVTSRMSCS----LYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHC 247
I L + T + + +YLV E M+ +L + ++ ++ + Q+LCG+ H
Sbjct: 86 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ---MELDHERMSYLLYQMLCGIKHL 142
Query: 248 HSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGA 307
HS G++HRD+K SN+++ ++ LKI DFGLA + +T VVT +YR PE++LG
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGM 200
Query: 308 TYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSKLPHATI 367
Y VD+WS GCI+ E+ K + PGR ++Q +K+ + G+P ++ +K + P
Sbjct: 201 G-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ-PTVRN 258
Query: 368 FKPQQPYKRCVA--ETFKD--FPA----------PALALMETLLSIDPADRGSAASALRS 413
+ +P + + F D FPA A L+ +L IDPA R S AL+
Sbjct: 259 YVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 318
Query: 414 EFFTM 418
+ +
Sbjct: 319 PYINV 323
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 97/332 (29%), Positives = 168/332 (50%), Gaps = 29/332 (8%)
Query: 132 FEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINV 191
++ L IG G V A D + VA+KK+ + RE+ +++ ++H N+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNI 85
Query: 192 IKLEGLVTSRMSCS----LYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHC 247
I L + T + + +YLV E M+ +L + ++ ++ + Q+L G+ H
Sbjct: 86 ISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQ---MELDHERMSYLLYQMLXGIKHL 142
Query: 248 HSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGA 307
HS G++HRD+K SN+++ ++ LKI DFGLA + +T VVT +YR PE++LG
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGM 200
Query: 308 TYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSKLPHATI 367
Y VD+WS GCI+ E+ K + PGR ++Q +K+ + G+P ++ +K + P
Sbjct: 201 G-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ-PTVRN 258
Query: 368 FKPQQPYKRCVA--ETFKD--FPA----------PALALMETLLSIDPADRGSAASALRS 413
+ +P + + F D FPA A L+ +L IDPA R S AL+
Sbjct: 259 YVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 318
Query: 414 EFFTMKPLPCDPSSLPKYPPSKEFDAKIRDEE 445
+ + DP+ + + PP + +D ++ + E
Sbjct: 319 PYINVW---YDPAEV-EAPPPQIYDKQLDERE 346
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 100/347 (28%), Positives = 170/347 (48%), Gaps = 26/347 (7%)
Query: 132 FEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINV 191
++ L IG G V A D ++ VA+KK+ + RE+ +++ ++H N+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 192 IKLEGLVTSRMSCS----LYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHC 247
I L + T + S +Y+V E M+ +L + ++ ++ + Q+LCG+ H
Sbjct: 86 IGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ---MELDHERMSYLLYQMLCGIKHL 142
Query: 248 HSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGA 307
HS G++HRD+K SN+++ ++ LKI DFGLA + + VVT +YR PE++LG
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMEPEVVTRYYRAPEVILGM 200
Query: 308 TYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSKLPHATI 367
Y VD+WS GCI+ E+ K + PGR ++Q +K+ + G+P + +K + P
Sbjct: 201 G-YKENVDIWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPAFMKKLQ-PTVRN 258
Query: 368 FKPQQPYK--RCVAETFKD--FPA----------PALALMETLLSIDPADRGSAASALRS 413
+ +P + F D FPA A L+ +L ID + R S AL+
Sbjct: 259 YVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 318
Query: 414 EFFTMKPLPCDPSSLPKYPPSKEFDAKIRDEEARRQGGSKGQRMDLE 460
+ + P + + P P K+ D + E ++ K + MDLE
Sbjct: 319 PYINVWYDPSEAEAPPPKIPDKQLDEREHTIEEWKELIYK-EVMDLE 364
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 97/332 (29%), Positives = 168/332 (50%), Gaps = 29/332 (8%)
Query: 132 FEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINV 191
++ L IG G V A D + VA+KK+ + RE+ +++ ++H N+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 192 IKLEGLVTSRMSCS----LYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHC 247
I L + T + + +YLV E M+ +L + ++ ++ + Q+L G+ H
Sbjct: 86 ISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQ---MELDHERMSYLLYQMLXGIKHL 142
Query: 248 HSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGA 307
HS G++HRD+K SN+++ ++ LKI DFGLA + +T VVT +YR PE++LG
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGM 200
Query: 308 TYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSKLPHATI 367
Y VD+WS GCI+ E+ K + PGR ++Q +K+ + G+P ++ +K + P
Sbjct: 201 G-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ-PTVRN 258
Query: 368 FKPQQPYKRCVA--ETFKD--FPA----------PALALMETLLSIDPADRGSAASALRS 413
+ +P + + F D FPA A L+ +L IDPA R S AL+
Sbjct: 259 YVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 318
Query: 414 EFFTMKPLPCDPSSLPKYPPSKEFDAKIRDEE 445
+ + DP+ + + PP + +D ++ + E
Sbjct: 319 PYINVW---YDPAEV-EAPPPQIYDKQLDERE 346
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 97/332 (29%), Positives = 168/332 (50%), Gaps = 29/332 (8%)
Query: 132 FEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINV 191
++ L IG G V A D + VA+KK+ + RE+ +++ ++H N+
Sbjct: 19 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 78
Query: 192 IKLEGLVTSRMSCS----LYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHC 247
I L + T + + +YLV E M+ +L + ++ ++ + Q+L G+ H
Sbjct: 79 ISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQ---MELDHERMSYLLYQMLXGIKHL 135
Query: 248 HSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGA 307
HS G++HRD+K SN+++ ++ LKI DFGLA + +T VVT +YR PE++LG
Sbjct: 136 HSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGM 193
Query: 308 TYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSKLPHATI 367
Y VD+WS GCI+ E+ K + PGR ++Q +K+ + G+P ++ +K + P
Sbjct: 194 G-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ-PTVRN 251
Query: 368 FKPQQPYKRCVA--ETFKD--FPA----------PALALMETLLSIDPADRGSAASALRS 413
+ +P + + F D FPA A L+ +L IDPA R S AL+
Sbjct: 252 YVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 311
Query: 414 EFFTMKPLPCDPSSLPKYPPSKEFDAKIRDEE 445
+ + DP+ + + PP + +D ++ + E
Sbjct: 312 PYINVW---YDPAEV-EAPPPQIYDKQLDERE 339
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 92/323 (28%), Positives = 152/323 (47%), Gaps = 56/323 (17%)
Query: 138 IGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINVIKL--- 194
+G G++ V D++ K ALKKV D R+ RE+ I++ LDH+N+IKL
Sbjct: 15 LGTGSFGIVCEVFDIESGKRFALKKVLQDP------RYKNRELDIMKVLDHVNIIKLVDY 68
Query: 195 ---------------------------------EGLVTSRMSCSLYLVFEYME---HDLA 218
+V + L ++ EY+ H +
Sbjct: 69 FYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPDTLHKVL 128
Query: 219 GLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDN-NGILKIADFGL 277
G + Y+ QL + HS G+ HRDIK NLL+++ + LK+ DFG
Sbjct: 129 KSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKDNTLKLCDFGS 188
Query: 278 ASFYDPDQNQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRT 337
A P ++P + + + +YR PEL+LGAT Y ++DLWS GC+ EL GKP+ G T
Sbjct: 189 AKKLIP--SEPSVAXICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGET 246
Query: 338 EVEQLHKIFKLCGSPSEDYWRKSKLPHATIFK----PQQPYKRCVAETFKDFPAPALALM 393
++QL +I ++ G+P+++ + PH T + + +++ + E P+ A+ L+
Sbjct: 247 SIDQLVRIIQIMGTPTKEQMIRMN-PHYTEVRFPTLKAKDWRKILPE---GTPSLAIDLL 302
Query: 394 ETLLSIDPADRGSAASALRSEFF 416
E +L +P R + A+ FF
Sbjct: 303 EQILRYEPDLRINPYEAMAHPFF 325
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 92/283 (32%), Positives = 134/283 (47%), Gaps = 60/283 (21%)
Query: 130 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVR--FDNLEPESVRFMAREIHILRRLD 187
D++E IG+G+Y VY A D + K VA+KKV F++L + + REI IL RL
Sbjct: 28 DNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLI--DCKRILREITILNRLK 85
Query: 188 HINVIKLEGLVTSRMSC---SLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGL 244
+I+L L+ LY+V E + DL L P + +E VK + LL G
Sbjct: 86 SDYIIRLHDLIIPEDLLKFDELYIVLEIADSDLKKLFKTP-IFLTEQHVKTILYNLLLGE 144
Query: 245 DHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQN------------------ 286
H G++HRD+K +N L++ + +KI DFGLA + D++
Sbjct: 145 KFIHESGIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEKEENEEPGP 204
Query: 287 ------QPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYAGK---------- 330
+ LTS VVT WYR PEL+L Y ++D+WSTGCI AEL
Sbjct: 205 HNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELLNMMKSHINNPTNR 264
Query: 331 -PIMPG-----------------RTEVEQLHKIFKLCGSPSED 355
P+ PG ++ +QL+ IF + G+P E+
Sbjct: 265 FPLFPGSSCFPLSPDHNSKKVHEKSNRDQLNIIFNVIGTPPEE 307
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 91/299 (30%), Positives = 155/299 (51%), Gaps = 23/299 (7%)
Query: 130 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRL-DH 188
D ++ + K+G+G YS V+ A ++ + V +K L+P + REI IL L
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKI-----LKPVKKNKIKREIKILENLRGG 91
Query: 189 INVIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHC 247
N+I L +V +S + LVFE++ + D L ++ ++ YM ++L LD+C
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQ----TLTDYDIRFYMYEILKALDYC 147
Query: 248 HSRGVLHRDIKGSNLLIDN-NGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLG 306
HS G++HRD+K N++ID+ + L++ D+GLA FY P Q RV + +++ PELL+
Sbjct: 148 HSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP--GQEYNVRVASRYFKGPELLVD 205
Query: 307 ATYYGTAVDLWSTGCILAEL-YAGKPIMPGRTEVEQLHKIFKLCGSPS-EDYWRKSKLPH 364
Y ++D+WS GC+LA + + +P G +QL +I K+ G+ DY K +
Sbjct: 206 YQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIEL 265
Query: 365 ATIFK------PQQPYKRCVAETFKDFPAP-ALALMETLLSIDPADRGSAASALRSEFF 416
F ++ ++R V + +P AL ++ LL D R +A A+ +F
Sbjct: 266 DPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 122 bits (306), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 98/314 (31%), Positives = 147/314 (46%), Gaps = 39/314 (12%)
Query: 127 RRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRL 186
+ D F+ GQGT+ V ++ VA+KKV D RF RE+ I++ L
Sbjct: 20 KEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP------RFRNRELQIMQDL 73
Query: 187 ---DHINVIKLEGLVTS-----RMSCSLYLVFEYMEHDLA---------GLASHPGLKFS 229
H N+++L+ + R L +V EY+ L +A P L
Sbjct: 74 AVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPIL--- 130
Query: 230 EAQVKCYMQQLL--CGLDHCHSRGVLHRDIKGSNLLIDN-NGILKIADFGLASFYDPDQN 286
+K ++ QL+ G H S V HRDIK N+L++ +G LK+ DFG A P +
Sbjct: 131 ---IKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSP--S 185
Query: 287 QPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIF 346
+P + + + +YR PEL+ G +Y TAVD+WS GCI AE+ G+PI G QLH+I
Sbjct: 186 EPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIV 245
Query: 347 KLCGSPSEDYWRKSKLPHATIFKPQQ---PYKRCVAE-TFKDFPAPALALMETLLSIDPA 402
++ G PS + RK H + P+ ++ + KD A L+ LL P
Sbjct: 246 RVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKD-AKEAYDLLSALLQYLPE 304
Query: 403 DRGSAASALRSEFF 416
+R AL +F
Sbjct: 305 ERMKPYEALCHPYF 318
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 95/312 (30%), Positives = 141/312 (45%), Gaps = 38/312 (12%)
Query: 138 IGQGTYSNVYRARDLDQKKI-VALKKV-------RFDNLEPESV--RFMAREIHILRRLD 187
I G+Y V +D + I VA+K+V R N+ +S + + REI +L
Sbjct: 30 ISSGSYGAV--CAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFH 87
Query: 188 HINVIKLEGLVTSRMSCS---LYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGL 244
H N++ L + + LYLV E M DLA + + S ++ +M +L GL
Sbjct: 88 HPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGL 147
Query: 245 DHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELL 304
H GV+HRD+ N+L+ +N + I DF LA D N+ T V WYR PEL+
Sbjct: 148 HVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANK--THYVTHRWYRAPELV 205
Query: 305 LGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSP------------ 352
+ + VD+WS GC++AE++ K + G T QL+KI ++ G+P
Sbjct: 206 MQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPS 265
Query: 353 SEDYWRKSKLPHATIFKPQQPYKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALR 412
+ DY R S P + A P AL L+ +L +P R S ALR
Sbjct: 266 ARDYLRNSL--------SNVPARAWTAVVPTADPV-ALDLIAKMLEFNPQRRISTEQALR 316
Query: 413 SEFFTMKPLPCD 424
+F P D
Sbjct: 317 HPYFESLFDPLD 328
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 95/312 (30%), Positives = 141/312 (45%), Gaps = 38/312 (12%)
Query: 138 IGQGTYSNVYRARDLDQKKI-VALKKV-------RFDNLEPESV--RFMAREIHILRRLD 187
I G+Y V +D + I VA+K+V R N+ +S + + REI +L
Sbjct: 30 ISSGSYGAV--CAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFH 87
Query: 188 HINVIKLEGLVTSRMSCS---LYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGL 244
H N++ L + + LYLV E M DLA + + S ++ +M +L GL
Sbjct: 88 HPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGL 147
Query: 245 DHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELL 304
H GV+HRD+ N+L+ +N + I DF LA D N+ T V WYR PEL+
Sbjct: 148 HVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANK--THYVTHRWYRAPELV 205
Query: 305 LGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSP------------ 352
+ + VD+WS GC++AE++ K + G T QL+KI ++ G+P
Sbjct: 206 MQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPS 265
Query: 353 SEDYWRKSKLPHATIFKPQQPYKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALR 412
+ DY R S P + A P AL L+ +L +P R S ALR
Sbjct: 266 ARDYLRNSL--------SNVPARAWTAVVPTADPV-ALDLIAKMLEFNPQRRISTEQALR 316
Query: 413 SEFFTMKPLPCD 424
+F P D
Sbjct: 317 HPYFESLFDPLD 328
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 80/240 (33%), Positives = 127/240 (52%), Gaps = 21/240 (8%)
Query: 190 NVIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCH 248
N+IKL V +S + LVFEY+ + D L ++ ++ YM +LL LD+CH
Sbjct: 99 NIIKLIDTVKDPVSKTPALVFEYINNTDFKQLYQ----ILTDFDIRFYMYELLKALDYCH 154
Query: 249 SRGVLHRDIKGSNLLIDN-NGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGA 307
S+G++HRD+K N++ID+ L++ D+GLA FY P Q RV + +++ PELL+
Sbjct: 155 SKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQE--YNVRVASRYFKGPELLVDY 212
Query: 308 TYYGTAVDLWSTGCILAEL-YAGKPIMPGRTEVEQLHKIFKLCGSPS-EDYWRKSKL--- 362
Y ++D+WS GC+LA + + +P G+ +QL +I K+ G+ Y +K +
Sbjct: 213 QMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGTEELYGYLKKYHIDLD 272
Query: 363 PHATIFKPQQPYKRCVAETF-----KDFPAP-ALALMETLLSIDPADRGSAASALRSEFF 416
PH Q KR E F + +P AL L++ LL D R +A A+ +F
Sbjct: 273 PHFNDILGQHSRKRW--ENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAKEAMEHPYF 330
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 90/267 (33%), Positives = 132/267 (49%), Gaps = 24/267 (8%)
Query: 129 ADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRL-- 186
A +E L IG+G++ V +A D + VALK VR E R A EI IL L
Sbjct: 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRN---EKRFHRQAAEEIRILEHLRK 152
Query: 187 ----DHINVIK-LEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLK-FSEAQVKCYMQQL 240
+ +NVI LE C + FE + +L L + FS V+ + +
Sbjct: 153 QDKDNTMNVIHMLENFTFRNHIC---MTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSI 209
Query: 241 LCGLDHCHSRGVLHRDIKGSNLLIDNNGI--LKIADFGLASFYDPDQNQPLTSRVVTLWY 298
L LD H ++H D+K N+L+ G +K+ DFG + + ++Q + + + + +Y
Sbjct: 210 LQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCY----EHQRVYTXIQSRFY 265
Query: 299 RPPELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWR 358
R PE++LGA Y G +D+WS GCILAEL G P++PG E +QL + +L G PS+
Sbjct: 266 RAPEVILGARY-GMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLD 324
Query: 359 KSKLPHATIFKPQQPYKR-CVAETFKD 384
SK A F + Y R C T D
Sbjct: 325 ASK--RAKNFVSXKGYPRYCTVTTLSD 349
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 80/240 (33%), Positives = 127/240 (52%), Gaps = 21/240 (8%)
Query: 190 NVIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCH 248
N+IKL V +S + LVFEY+ + D L ++ ++ YM +LL LD+CH
Sbjct: 94 NIIKLIDTVKDPVSKTPALVFEYINNTDFKQLYQ----ILTDFDIRFYMYELLKALDYCH 149
Query: 249 SRGVLHRDIKGSNLLIDN-NGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGA 307
S+G++HRD+K N++ID+ L++ D+GLA FY P Q RV + +++ PELL+
Sbjct: 150 SKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQE--YNVRVASRYFKGPELLVDY 207
Query: 308 TYYGTAVDLWSTGCILAEL-YAGKPIMPGRTEVEQLHKIFKLCGSPS-EDYWRKSKL--- 362
Y ++D+WS GC+LA + + +P G+ +QL +I K+ G+ Y +K +
Sbjct: 208 QMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGTEELYGYLKKYHIDLD 267
Query: 363 PHATIFKPQQPYKRCVAETF-----KDFPAP-ALALMETLLSIDPADRGSAASALRSEFF 416
PH Q KR E F + +P AL L++ LL D R +A A+ +F
Sbjct: 268 PHFNDILGQHSRKRW--ENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAKEAMEHPYF 325
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 115 bits (289), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 78/217 (35%), Positives = 109/217 (50%), Gaps = 7/217 (3%)
Query: 130 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRF-MAREIHILRRLDH 188
+ FE +G+G + NVY AR+ K I+ALK + LE V + RE+ I L H
Sbjct: 34 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 93
Query: 189 INVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCH 248
N+++L G + +YL+ EY KF E + Y+ +L L +CH
Sbjct: 94 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 151
Query: 249 SRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGAT 308
S+ V+HRDIK NLL+ + G LKIADFG S + P + T+ TL Y PPE++ G
Sbjct: 152 SKRVIHRDIKPENLLLGSAGELKIADFGW-SVHAPSSRR--TTLCGTLDYLPPEMIEGRM 208
Query: 309 YYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKI 345
+ VDLWS G + E GKP T E +I
Sbjct: 209 -HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 244
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 90/267 (33%), Positives = 132/267 (49%), Gaps = 24/267 (8%)
Query: 129 ADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRL-- 186
A +E L IG+G++ V +A D + VALK VR E R A EI IL L
Sbjct: 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRN---EKRFHRQAAEEIRILEHLRK 152
Query: 187 ----DHINVIK-LEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLK-FSEAQVKCYMQQL 240
+ +NVI LE C + FE + +L L + FS V+ + +
Sbjct: 153 QDKDNTMNVIHMLENFTFRNHIC---MTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSI 209
Query: 241 LCGLDHCHSRGVLHRDIKGSNLLIDNNGI--LKIADFGLASFYDPDQNQPLTSRVVTLWY 298
L LD H ++H D+K N+L+ G +K+ DFG + + ++Q + + + + +Y
Sbjct: 210 LQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCY----EHQRVYTXIQSRFY 265
Query: 299 RPPELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWR 358
R PE++LGA Y G +D+WS GCILAEL G P++PG E +QL + +L G PS+
Sbjct: 266 RAPEVILGARY-GMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLD 324
Query: 359 KSKLPHATIFKPQQPYKR-CVAETFKD 384
SK A F + Y R C T D
Sbjct: 325 ASK--RAKNFVSXKGYPRYCTVTTLSD 349
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/217 (35%), Positives = 109/217 (50%), Gaps = 7/217 (3%)
Query: 130 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRF-MAREIHILRRLDH 188
+ FE +G+G + NVY AR+ K I+ALK + LE V + RE+ I L H
Sbjct: 25 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 84
Query: 189 INVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCH 248
N+++L G + +YL+ EY KF E + Y+ +L L +CH
Sbjct: 85 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 142
Query: 249 SRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGAT 308
S+ V+HRDIK NLL+ + G LKIADFG S + P + T+ TL Y PPE++ G
Sbjct: 143 SKRVIHRDIKPENLLLGSAGELKIADFGW-SVHAPSSRR--TTLCGTLDYLPPEMIEGRM 199
Query: 309 YYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKI 345
+ VDLWS G + E GKP T E +I
Sbjct: 200 -HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 235
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/217 (35%), Positives = 109/217 (50%), Gaps = 7/217 (3%)
Query: 130 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRF-MAREIHILRRLDH 188
+ FE +G+G + NVY AR+ K I+ALK + LE V + RE+ I L H
Sbjct: 13 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 72
Query: 189 INVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCH 248
N+++L G + +YL+ EY KF E + Y+ +L L +CH
Sbjct: 73 PNILRLYGYFHD--ATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCH 130
Query: 249 SRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGAT 308
S+ V+HRDIK NLL+ + G LKIADFG S + P + T+ TL Y PPE++ G
Sbjct: 131 SKRVIHRDIKPENLLLGSAGELKIADFGW-SVHAPSSRR--TTLCGTLDYLPPEMIEGRM 187
Query: 309 YYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKI 345
+ VDLWS G + E GKP T E +I
Sbjct: 188 -HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 223
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 78/217 (35%), Positives = 109/217 (50%), Gaps = 7/217 (3%)
Query: 130 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRF-MAREIHILRRLDH 188
+ FE +G+G + NVY AR+ K I+ALK + LE V + RE+ I L H
Sbjct: 13 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 72
Query: 189 INVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCH 248
N+++L G + +YL+ EY KF E + Y+ +L L +CH
Sbjct: 73 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 130
Query: 249 SRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGAT 308
S+ V+HRDIK NLL+ + G LKIADFG S + P + T+ TL Y PPE++ G
Sbjct: 131 SKRVIHRDIKPENLLLGSAGELKIADFGW-SVHAPSSRR--TTLCGTLDYLPPEMIEGRM 187
Query: 309 YYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKI 345
+ VDLWS G + E GKP T E +I
Sbjct: 188 -HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 223
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 78/217 (35%), Positives = 109/217 (50%), Gaps = 7/217 (3%)
Query: 130 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRF-MAREIHILRRLDH 188
+ FE +G+G + NVY AR+ K I+ALK + LE V + RE+ I L H
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 189 INVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCH 248
N+++L G + +YL+ EY KF E + Y+ +L L +CH
Sbjct: 68 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 249 SRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGAT 308
S+ V+HRDIK NLL+ + G LKIADFG S + P + T+ TL Y PPE++ G
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFGW-SVHAPSSRR--TTLCGTLDYLPPEMIEGRM 182
Query: 309 YYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKI 345
+ VDLWS G + E GKP T E +I
Sbjct: 183 -HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 218
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 153/302 (50%), Gaps = 29/302 (9%)
Query: 130 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHI 189
D ++ + K+G+G YS V+ A ++ + VA+K + ++ L+++
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVAVKI--------LKPVKKKKIKREIKILENL 88
Query: 190 ----NVIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGL 244
N+I L +V +S + LVFE++ + D L ++ ++ YM ++L L
Sbjct: 89 RGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQ----TLTDYDIRFYMYEILKAL 144
Query: 245 DHCHSRGVLHRDIKGSNLLIDN-NGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPEL 303
D+CHS G++HRD+K N+LID+ + L++ D+GLA FY P Q RV + +++ PEL
Sbjct: 145 DYCHSMGIMHRDVKPHNVLIDHEHRKLRLIDWGLAEFYHP--GQEYNVRVASRYFKGPEL 202
Query: 304 LLGATYYGTAVDLWSTGCILAEL-YAGKPIMPGRTEVEQLHKIFKLCGSPS-EDYWRKSK 361
L+ Y ++D+WS GC+LA + + +P G +QL +I K+ G+ DY K
Sbjct: 203 LVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYN 262
Query: 362 LPHATIFK------PQQPYKRCVAETFKDFPAP-ALALMETLLSIDPADRGSAASALRSE 414
+ F ++ ++R V + +P AL ++ LL D R +A A+
Sbjct: 263 IELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHP 322
Query: 415 FF 416
+F
Sbjct: 323 YF 324
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 78/217 (35%), Positives = 109/217 (50%), Gaps = 7/217 (3%)
Query: 130 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRF-MAREIHILRRLDH 188
+ FE +G+G + NVY AR+ K I+ALK + LE V + RE+ I L H
Sbjct: 11 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 70
Query: 189 INVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCH 248
N+++L G + +YL+ EY KF E + Y+ +L L +CH
Sbjct: 71 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 249 SRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGAT 308
S+ V+HRDIK NLL+ + G LKIADFG S + P + T+ TL Y PPE++ G
Sbjct: 129 SKRVIHRDIKPENLLLGSAGELKIADFGW-SVHAPSSRR--TTLCGTLDYLPPEMIEGRM 185
Query: 309 YYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKI 345
+ VDLWS G + E GKP T E +I
Sbjct: 186 -HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 221
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 76/217 (35%), Positives = 107/217 (49%), Gaps = 7/217 (3%)
Query: 130 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRF-MAREIHILRRLDH 188
+ FE +G+G + NVY AR+ K I+ALK + LE V + RE+ I L H
Sbjct: 9 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 68
Query: 189 INVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCH 248
N+++L G + +YL+ EY KF E + Y+ +L L +CH
Sbjct: 69 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 126
Query: 249 SRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGAT 308
S+ V+HRDIK NLL+ + G LKIADFG + + L+ TL Y PPE++ G
Sbjct: 127 SKRVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRRTTLSG---TLDYLPPEMIEGRM 183
Query: 309 YYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKI 345
+ VDLWS G + E GKP T E +I
Sbjct: 184 -HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 219
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 76/217 (35%), Positives = 106/217 (48%), Gaps = 7/217 (3%)
Query: 130 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRF-MAREIHILRRLDH 188
+ FE +G+G + NVY AR+ K I+ALK + LE V + RE+ I L H
Sbjct: 34 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 93
Query: 189 INVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCH 248
N+++L G + +YL+ EY KF E + Y+ +L L +CH
Sbjct: 94 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 151
Query: 249 SRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGAT 308
S+ V+HRDIK NLL+ + G LKIADFG + + L TL Y PPE++ G
Sbjct: 152 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLCG---TLDYLPPEMIEGRM 208
Query: 309 YYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKI 345
+ VDLWS G + E GKP T E +I
Sbjct: 209 -HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 244
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 89/267 (33%), Positives = 129/267 (48%), Gaps = 24/267 (8%)
Query: 129 ADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRL-- 186
A +E L IG+G + V +A D + VALK VR E R A EI IL L
Sbjct: 96 AYRYEVLKVIGKGXFGQVVKAYDHKVHQHVALKMVRN---EKRFHRQAAEEIRILEHLRK 152
Query: 187 ----DHINVIK-LEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLK-FSEAQVKCYMQQL 240
+ +NVI LE C + FE + +L L + FS V+ + +
Sbjct: 153 QDKDNTMNVIHMLENFTFRNHIC---MTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSI 209
Query: 241 LCGLDHCHSRGVLHRDIKGSNLLIDNNGI--LKIADFGLASFYDPDQNQPLTSRVVTLWY 298
L LD H ++H D+K N+L+ G +K+ DFG + + ++Q + + + +Y
Sbjct: 210 LQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCY----EHQRVYXXIQSRFY 265
Query: 299 RPPELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWR 358
R PE++LGA Y G +D+WS GCILAEL G P++PG E +QL + +L G P +
Sbjct: 266 RAPEVILGARY-GMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPXQKLLD 324
Query: 359 KSKLPHATIFKPQQPYKR-CVAETFKD 384
SK A F + Y R C T D
Sbjct: 325 ASK--RAKNFVSXKGYPRYCTVTTLSD 349
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 78/217 (35%), Positives = 109/217 (50%), Gaps = 7/217 (3%)
Query: 130 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRF-MAREIHILRRLDH 188
+ FE +G+G + NVY AR+ K I+ALK + LE V + RE+ I L H
Sbjct: 12 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 71
Query: 189 INVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCH 248
N+++L G + +YL+ EY KF E + Y+ +L L +CH
Sbjct: 72 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 129
Query: 249 SRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGAT 308
S+ V+HRDIK NLL+ + G LKIADFG S + P + T+ TL Y PPE++ G
Sbjct: 130 SKRVIHRDIKPENLLLGSAGELKIADFGW-SVHAPSSRR--TTLCGTLDYLPPEMIEGRM 186
Query: 309 YYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKI 345
+ VDLWS G + E GKP T E +I
Sbjct: 187 -HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 222
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 78/217 (35%), Positives = 108/217 (49%), Gaps = 7/217 (3%)
Query: 130 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRF-MAREIHILRRLDH 188
+ FE +G+G + NVY AR+ K I+ALK + LE V + RE+ I L H
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 189 INVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCH 248
N+++L G + +YL+ EY KF E + Y+ +L L +CH
Sbjct: 68 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 249 SRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGAT 308
S+ V+HRDIK NLL+ + G LKIADFG S + P + T TL Y PPE++ G
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFGW-SVHAPSSRR--TELCGTLDYLPPEMIEGRM 182
Query: 309 YYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKI 345
+ VDLWS G + E GKP T E +I
Sbjct: 183 -HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 218
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 78/217 (35%), Positives = 108/217 (49%), Gaps = 7/217 (3%)
Query: 130 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRF-MAREIHILRRLDH 188
+ FE +G+G + NVY AR+ K I+ALK + LE V + RE+ I L H
Sbjct: 13 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 72
Query: 189 INVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCH 248
N+++L G + +YL+ EY KF E + Y+ +L L +CH
Sbjct: 73 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 130
Query: 249 SRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGAT 308
S+ V+HRDIK NLL+ + G LKIADFG S + P + T TL Y PPE++ G
Sbjct: 131 SKRVIHRDIKPENLLLGSAGELKIADFGW-SVHAPSSRR--TDLCGTLDYLPPEMIEGRM 187
Query: 309 YYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKI 345
+ VDLWS G + E GKP T E +I
Sbjct: 188 -HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 223
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 78/217 (35%), Positives = 109/217 (50%), Gaps = 7/217 (3%)
Query: 130 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRF-MAREIHILRRLDH 188
+ FE +G+G + NVY AR+ K I+ALK + LE V + RE+ I L H
Sbjct: 7 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 66
Query: 189 INVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCH 248
N+++L G + +YL+ EY KF E + Y+ +L L +CH
Sbjct: 67 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 124
Query: 249 SRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGAT 308
S+ V+HRDIK NLL+ + G LKIADFG S + P + T+ TL Y PPE++ G
Sbjct: 125 SKRVIHRDIKPENLLLGSAGELKIADFGW-SVHAPSSRR--TTLCGTLDYLPPEMIEGRM 181
Query: 309 YYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKI 345
+ VDLWS G + E GKP T E +I
Sbjct: 182 -HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 217
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 78/217 (35%), Positives = 109/217 (50%), Gaps = 7/217 (3%)
Query: 130 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRF-MAREIHILRRLDH 188
+ FE +G+G + NVY AR+ K I+ALK + LE V + RE+ I L H
Sbjct: 11 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 70
Query: 189 INVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCH 248
N+++L G + +YL+ EY KF E + Y+ +L L +CH
Sbjct: 71 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 249 SRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGAT 308
S+ V+HRDIK NLL+ + G LKIADFG S + P + T+ TL Y PPE++ G
Sbjct: 129 SKRVIHRDIKPENLLLGSAGELKIADFGW-SVHAPSSRR--TTLCGTLDYLPPEMIEGRM 185
Query: 309 YYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKI 345
+ VDLWS G + E GKP T E +I
Sbjct: 186 -HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 221
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 78/217 (35%), Positives = 108/217 (49%), Gaps = 7/217 (3%)
Query: 130 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRF-MAREIHILRRLDH 188
+ FE +G+G + NVY AR+ K I+ALK + LE V + RE+ I L H
Sbjct: 9 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 68
Query: 189 INVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCH 248
N+++L G + +YL+ EY KF E + Y+ +L L +CH
Sbjct: 69 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 126
Query: 249 SRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGAT 308
S+ V+HRDIK NLL+ + G LKIADFG S + P + T TL Y PPE++ G
Sbjct: 127 SKRVIHRDIKPENLLLGSAGELKIADFGW-SVHAPSSRR--TDLCGTLDYLPPEMIEGRM 183
Query: 309 YYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKI 345
+ VDLWS G + E GKP T E +I
Sbjct: 184 -HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 219
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 78/217 (35%), Positives = 110/217 (50%), Gaps = 7/217 (3%)
Query: 130 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRF-MAREIHILRRLDH 188
+ FE +G+G + NVY AR+ +K I+ALK + LE V + RE+ I L H
Sbjct: 5 EDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 64
Query: 189 INVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCH 248
N+++L G + +YL+ EY KF E + Y+ +L L +CH
Sbjct: 65 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 122
Query: 249 SRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGAT 308
S+ V+HRDIK NLL+ + G LKIADFG S + P + T+ TL Y PPE++ G
Sbjct: 123 SKRVIHRDIKPENLLLGSAGELKIADFGW-SVHAPSSRR--TTLCGTLDYLPPEMIEGRM 179
Query: 309 YYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKI 345
+ VDLWS G + E GKP T E +I
Sbjct: 180 -HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 215
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 78/217 (35%), Positives = 108/217 (49%), Gaps = 7/217 (3%)
Query: 130 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRF-MAREIHILRRLDH 188
+ FE +G+G + NVY AR+ K I+ALK + LE V + RE+ I L H
Sbjct: 13 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 72
Query: 189 INVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCH 248
N+++L G + +YL+ EY KF E + Y+ +L L +CH
Sbjct: 73 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 130
Query: 249 SRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGAT 308
S+ V+HRDIK NLL+ + G LKIADFG S + P + T+ TL Y PPE + G
Sbjct: 131 SKRVIHRDIKPENLLLGSAGELKIADFGW-SVHAPSSRR--TTLCGTLDYLPPEXIEGRX 187
Query: 309 YYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKI 345
+ VDLWS G + E GKP T E +I
Sbjct: 188 -HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 223
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 112 bits (280), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 78/217 (35%), Positives = 108/217 (49%), Gaps = 7/217 (3%)
Query: 130 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRF-MAREIHILRRLDH 188
+ FE +G+G + NVY AR+ K I+ALK + LE V + RE+ I L H
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 189 INVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCH 248
N+++L G + +YL+ EY KF E + Y+ +L L +CH
Sbjct: 68 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 249 SRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGAT 308
S+ V+HRDIK NLL+ + G LKIADFG S + P + T TL Y PPE++ G
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFGW-SVHAPSSRR--TDLCGTLDYLPPEMIEGRM 182
Query: 309 YYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKI 345
+ VDLWS G + E GKP T E +I
Sbjct: 183 -HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 218
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 78/217 (35%), Positives = 108/217 (49%), Gaps = 7/217 (3%)
Query: 130 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRF-MAREIHILRRLDH 188
+ FE +G+G + NVY AR+ K I+ALK + LE V + RE+ I L H
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 189 INVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCH 248
N+++L G + +YL+ EY KF E + Y+ +L L +CH
Sbjct: 68 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 249 SRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGAT 308
S+ V+HRDIK NLL+ + G LKIADFG S + P + T TL Y PPE++ G
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFGW-SVHAPSSRR--TDLCGTLDYLPPEMIEGRM 182
Query: 309 YYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKI 345
+ VDLWS G + E GKP T E +I
Sbjct: 183 -HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 218
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 77/217 (35%), Positives = 109/217 (50%), Gaps = 7/217 (3%)
Query: 130 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRF-MAREIHILRRLDH 188
+ FE +G+G + NVY AR+ K I+ALK + LE V + RE+ I L H
Sbjct: 10 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 69
Query: 189 INVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCH 248
N+++L G + +YL+ EY KF E + Y+ +L L +CH
Sbjct: 70 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 127
Query: 249 SRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGAT 308
S+ V+HRDIK NLL+ + G LKIA+FG S + P + T+ TL Y PPE++ G
Sbjct: 128 SKRVIHRDIKPENLLLGSAGELKIANFGW-SVHAPSSRR--TTLCGTLDYLPPEMIEGRM 184
Query: 309 YYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKI 345
+ VDLWS G + E GKP T E +I
Sbjct: 185 -HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 220
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 76/217 (35%), Positives = 106/217 (48%), Gaps = 7/217 (3%)
Query: 130 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRF-MAREIHILRRLDH 188
+ FE +G+G + NVY AR+ K I+ALK + LE V + RE+ I L H
Sbjct: 13 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 72
Query: 189 INVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCH 248
N+++L G + +YL+ EY KF E + Y+ +L L +CH
Sbjct: 73 PNILRLYGYFHD--ATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCH 130
Query: 249 SRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGAT 308
S+ V+HRDIK NLL+ + G LKIADFG + + L TL Y PPE++ G
Sbjct: 131 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLXG---TLDYLPPEMIEGRM 187
Query: 309 YYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKI 345
+ VDLWS G + E GKP T E +I
Sbjct: 188 -HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 223
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/217 (35%), Positives = 108/217 (49%), Gaps = 7/217 (3%)
Query: 130 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRF-MAREIHILRRLDH 188
+ FE +G+G + NVY AR+ K I+ALK + LE V + RE+ I L H
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 189 INVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCH 248
N+++L G + +YL+ EY KF E + Y+ +L L +CH
Sbjct: 68 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 249 SRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGAT 308
S+ V+HRDIK NLL+ + G LKIADFG S + P + T TL Y PPE++ G
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFGW-SVHAPSSRR--TXLCGTLDYLPPEMIEGRM 182
Query: 309 YYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKI 345
+ VDLWS G + E GKP T E +I
Sbjct: 183 -HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 218
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/209 (35%), Positives = 106/209 (50%), Gaps = 7/209 (3%)
Query: 138 IGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRF-MAREIHILRRLDHINVIKLEG 196
+G+G + NVY AR+ K I+ALK + LE V + RE+ I L H N+++L G
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 197 LVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVLHRD 256
+ +YL+ EY +F E + Y+ +L L +CHS+ V+HRD
Sbjct: 80 YFHD--ATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSKRVIHRD 137
Query: 257 IKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGATYYGTAVDL 316
IK NLL+ +NG LKIADFG S + P + T+ TL Y PPE++ G + VDL
Sbjct: 138 IKPENLLLGSNGELKIADFGW-SVHAPSSRR--TTLCGTLDYLPPEMIEGRM-HDEKVDL 193
Query: 317 WSTGCILAELYAGKPIMPGRTEVEQLHKI 345
WS G + E G P T E +I
Sbjct: 194 WSLGVLCYEFLVGMPPFEAHTYQETYRRI 222
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/217 (35%), Positives = 107/217 (49%), Gaps = 7/217 (3%)
Query: 130 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRF-MAREIHILRRLDH 188
+ FE +G+G + NVY AR+ + K I+ALK + LE V + RE+ I L H
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 189 INVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCH 248
N+++L G S +YL+ EY KF E + Y+ +L L +CH
Sbjct: 68 PNILRLYGYFHD--STRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 249 SRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGAT 308
S+ V+HRDIK NLL+ + G LKIADFG + + L TL Y PPE++ G
Sbjct: 126 SKKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCG---TLDYLPPEMIEGRM 182
Query: 309 YYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKI 345
+ VDLWS G + E GKP T + +I
Sbjct: 183 -HDEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRI 218
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/217 (35%), Positives = 106/217 (48%), Gaps = 7/217 (3%)
Query: 130 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRF-MAREIHILRRLDH 188
+ FE +G+G + NVY AR+ K I+ALK + LE V + RE+ I L H
Sbjct: 10 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 69
Query: 189 INVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCH 248
N+++L G + +YL+ EY KF E + Y+ +L L +CH
Sbjct: 70 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 127
Query: 249 SRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGAT 308
S+ V+HRDIK NLL+ + G LKIADFG + + L TL Y PPE++ G
Sbjct: 128 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCG---TLDYLPPEMIEGRM 184
Query: 309 YYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKI 345
+ VDLWS G + E GKP T E +I
Sbjct: 185 -HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 220
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/217 (35%), Positives = 106/217 (48%), Gaps = 7/217 (3%)
Query: 130 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRF-MAREIHILRRLDH 188
+ FE +G+G + NVY AR+ K I+ALK + LE V + RE+ I L H
Sbjct: 11 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 70
Query: 189 INVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCH 248
N+++L G + +YL+ EY KF E + Y+ +L L +CH
Sbjct: 71 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 249 SRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGAT 308
S+ V+HRDIK NLL+ + G LKIADFG + + L TL Y PPE++ G
Sbjct: 129 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCG---TLDYLPPEMIEGRM 185
Query: 309 YYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKI 345
+ VDLWS G + E GKP T E +I
Sbjct: 186 -HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 221
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/217 (35%), Positives = 106/217 (48%), Gaps = 7/217 (3%)
Query: 130 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRF-MAREIHILRRLDH 188
+ FE +G+G + NVY AR+ K I+ALK + LE V + RE+ I L H
Sbjct: 9 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 68
Query: 189 INVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCH 248
N+++L G + +YL+ EY KF E + Y+ +L L +CH
Sbjct: 69 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 126
Query: 249 SRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGAT 308
S+ V+HRDIK NLL+ + G LKIADFG + + L TL Y PPE++ G
Sbjct: 127 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDTLCG---TLDYLPPEMIEGRM 183
Query: 309 YYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKI 345
+ VDLWS G + E GKP T E +I
Sbjct: 184 -HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 219
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/217 (35%), Positives = 109/217 (50%), Gaps = 7/217 (3%)
Query: 130 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRF-MAREIHILRRLDH 188
+ FE +G+G + NVY AR+ K I+ALK + LE V + RE+ I L H
Sbjct: 11 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 70
Query: 189 INVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCH 248
N+++L G + +YL+ EY KF E + Y+ +L L +CH
Sbjct: 71 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 249 SRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGAT 308
S+ V+HRDIK NLL+ + G LKIA+FG S + P + T+ TL Y PPE++ G
Sbjct: 129 SKRVIHRDIKPENLLLGSAGELKIANFGW-SVHAPSSRR--TTLCGTLDYLPPEMIEGRM 185
Query: 309 YYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKI 345
+ VDLWS G + E GKP T E +I
Sbjct: 186 -HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 221
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 125/238 (52%), Gaps = 17/238 (7%)
Query: 190 NVIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCH 248
N+I L +V +S + LVFE++ + D L ++ ++ YM ++L LD+CH
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQ----TLTDYDIRFYMYEILKALDYCH 148
Query: 249 SRGVLHRDIKGSNLLIDN-NGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGA 307
S G++HRD+K N++ID+ + L++ D+GLA FY P Q RV + +++ PELL+
Sbjct: 149 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP--GQEYNVRVASRYFKGPELLVDY 206
Query: 308 TYYGTAVDLWSTGCILAEL-YAGKPIMPGRTEVEQLHKIFKLCGSPS-EDYWRKSKLPHA 365
Y ++D+WS GC+LA + + +P G +QL +I K+ G+ DY K +
Sbjct: 207 QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELD 266
Query: 366 TIFK------PQQPYKRCVAETFKDFPAP-ALALMETLLSIDPADRGSAASALRSEFF 416
F ++ ++R V + +P AL ++ LL D R +A A+ +F
Sbjct: 267 PRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 125/238 (52%), Gaps = 17/238 (7%)
Query: 190 NVIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCH 248
N+I L +V +S + LVFE++ + D L ++ ++ YM ++L LD+CH
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQLRQ----TLTDYDIRFYMYEILKALDYCH 148
Query: 249 SRGVLHRDIKGSNLLIDN-NGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGA 307
S G++HRD+K N++ID+ + L++ D+GLA FY P Q RV + +++ PELL+
Sbjct: 149 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP--GQEYNVRVASRYFKGPELLVDY 206
Query: 308 TYYGTAVDLWSTGCILAEL-YAGKPIMPGRTEVEQLHKIFKLCGSPS-EDYWRKSKLPHA 365
Y ++D+WS GC+LA + + +P G +QL +I K+ G+ DY K +
Sbjct: 207 QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELD 266
Query: 366 TIFK------PQQPYKRCVAETFKDFPAP-ALALMETLLSIDPADRGSAASALRSEFF 416
F ++ ++R V + +P AL ++ LL D R +A A+ +F
Sbjct: 267 PRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 125/238 (52%), Gaps = 17/238 (7%)
Query: 190 NVIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCH 248
N+I L +V +S + LVFE++ + D L ++ ++ YM ++L LD+CH
Sbjct: 92 NIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQ----TLTDYDIRFYMYEILKALDYCH 147
Query: 249 SRGVLHRDIKGSNLLIDN-NGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGA 307
S G++HRD+K N++ID+ + L++ D+GLA FY P Q RV + +++ PELL+
Sbjct: 148 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP--GQEYNVRVASRYFKGPELLVDY 205
Query: 308 TYYGTAVDLWSTGCILAEL-YAGKPIMPGRTEVEQLHKIFKLCGSPS-EDYWRKSKLPHA 365
Y ++D+WS GC+LA + + +P G +QL +I K+ G+ DY K +
Sbjct: 206 QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELD 265
Query: 366 TIFK------PQQPYKRCVAETFKDFPAP-ALALMETLLSIDPADRGSAASALRSEFF 416
F ++ ++R V + +P AL ++ LL D R +A A+ +F
Sbjct: 266 PRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 323
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 125/238 (52%), Gaps = 17/238 (7%)
Query: 190 NVIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCH 248
N+I L +V +S + LVFE++ + D L ++ ++ YM ++L LD+CH
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQ----TLTDYDIRFYMYEILKALDYCH 148
Query: 249 SRGVLHRDIKGSNLLIDN-NGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGA 307
S G++HRD+K N++ID+ + L++ D+GLA FY P Q RV + +++ PELL+
Sbjct: 149 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP--GQEYNVRVASRYFKGPELLVDY 206
Query: 308 TYYGTAVDLWSTGCILAEL-YAGKPIMPGRTEVEQLHKIFKLCGSPS-EDYWRKSKLPHA 365
Y ++D+WS GC+LA + + +P G +QL +I K+ G+ DY K +
Sbjct: 207 QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELD 266
Query: 366 TIFK------PQQPYKRCVAETFKDFPAP-ALALMETLLSIDPADRGSAASALRSEFF 416
F ++ ++R V + +P AL ++ LL D R +A A+ +F
Sbjct: 267 PRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 125/238 (52%), Gaps = 17/238 (7%)
Query: 190 NVIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCH 248
N+I L +V +S + LVFE++ + D L ++ ++ YM ++L LD+CH
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQ----TLTDYDIRFYMYEILKALDYCH 148
Query: 249 SRGVLHRDIKGSNLLIDN-NGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGA 307
S G++HRD+K N++ID+ + L++ D+GLA FY P Q RV + +++ PELL+
Sbjct: 149 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP--GQEYNVRVASRYFKGPELLVDY 206
Query: 308 TYYGTAVDLWSTGCILAEL-YAGKPIMPGRTEVEQLHKIFKLCGSPS-EDYWRKSKLPHA 365
Y ++D+WS GC+LA + + +P G +QL +I K+ G+ DY K +
Sbjct: 207 QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELD 266
Query: 366 TIFK------PQQPYKRCVAETFKDFPAP-ALALMETLLSIDPADRGSAASALRSEFF 416
F ++ ++R V + +P AL ++ LL D R +A A+ +F
Sbjct: 267 PRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 125/238 (52%), Gaps = 17/238 (7%)
Query: 190 NVIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCH 248
N+I L +V +S + LVFE++ + D L ++ ++ YM ++L LD+CH
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQ----TLTDYDIRFYMYEILKALDYCH 148
Query: 249 SRGVLHRDIKGSNLLIDN-NGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGA 307
S G++HRD+K N++ID+ + L++ D+GLA FY P Q RV + +++ PELL+
Sbjct: 149 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP--GQEYNVRVASRYFKGPELLVDY 206
Query: 308 TYYGTAVDLWSTGCILAEL-YAGKPIMPGRTEVEQLHKIFKLCGSPS-EDYWRKSKLPHA 365
Y ++D+WS GC+LA + + +P G +QL +I K+ G+ DY K +
Sbjct: 207 QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELD 266
Query: 366 TIFK------PQQPYKRCVAETFKDFPAP-ALALMETLLSIDPADRGSAASALRSEFF 416
F ++ ++R V + +P AL ++ LL D R +A A+ +F
Sbjct: 267 PRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 125/238 (52%), Gaps = 17/238 (7%)
Query: 190 NVIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCH 248
N+I L +V +S + LVFE++ + D L ++ ++ YM ++L LD+CH
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQ----TLTDYDIRFYMYEILKALDYCH 148
Query: 249 SRGVLHRDIKGSNLLIDN-NGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGA 307
S G++HRD+K N++ID+ + L++ D+GLA FY P Q RV + +++ PELL+
Sbjct: 149 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP--GQEYNVRVASRYFKGPELLVDY 206
Query: 308 TYYGTAVDLWSTGCILAEL-YAGKPIMPGRTEVEQLHKIFKLCGSPS-EDYWRKSKLPHA 365
Y ++D+WS GC+LA + + +P G +QL +I K+ G+ DY K +
Sbjct: 207 QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELD 266
Query: 366 TIFK------PQQPYKRCVAETFKDFPAP-ALALMETLLSIDPADRGSAASALRSEFF 416
F ++ ++R V + +P AL ++ LL D R +A A+ +F
Sbjct: 267 PRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 125/238 (52%), Gaps = 17/238 (7%)
Query: 190 NVIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCH 248
N+I L +V +S + LVFE++ + D L ++ ++ YM ++L LD+CH
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQ----TLTDYDIRFYMYEILKALDYCH 148
Query: 249 SRGVLHRDIKGSNLLIDN-NGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGA 307
S G++HRD+K N++ID+ + L++ D+GLA FY P Q RV + +++ PELL+
Sbjct: 149 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP--GQEYNVRVASRYFKGPELLVDY 206
Query: 308 TYYGTAVDLWSTGCILAEL-YAGKPIMPGRTEVEQLHKIFKLCGSPS-EDYWRKSKLPHA 365
Y ++D+WS GC+LA + + +P G +QL +I K+ G+ DY K +
Sbjct: 207 QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELD 266
Query: 366 TIFK------PQQPYKRCVAETFKDFPAP-ALALMETLLSIDPADRGSAASALRSEFF 416
F ++ ++R V + +P AL ++ LL D R +A A+ +F
Sbjct: 267 PRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 125/238 (52%), Gaps = 17/238 (7%)
Query: 190 NVIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCH 248
N+I L +V +S + LVFE++ + D L ++ ++ YM ++L LD+CH
Sbjct: 98 NIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQ----TLTDYDIRFYMYEILKALDYCH 153
Query: 249 SRGVLHRDIKGSNLLIDN-NGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGA 307
S G++HRD+K N++ID+ + L++ D+GLA FY P Q RV + +++ PELL+
Sbjct: 154 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP--GQEYNVRVASRYFKGPELLVDY 211
Query: 308 TYYGTAVDLWSTGCILAEL-YAGKPIMPGRTEVEQLHKIFKLCGSPS-EDYWRKSKLPHA 365
Y ++D+WS GC+LA + + +P G +QL +I K+ G+ DY K +
Sbjct: 212 QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELD 271
Query: 366 TIFK------PQQPYKRCVAETFKDFPAP-ALALMETLLSIDPADRGSAASALRSEFF 416
F ++ ++R V + +P AL ++ LL D R +A A+ +F
Sbjct: 272 PRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 329
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 125/238 (52%), Gaps = 17/238 (7%)
Query: 190 NVIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCH 248
N+I L +V +S + LVFE++ + D L ++ ++ YM ++L LD+CH
Sbjct: 92 NIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQ----TLTDYDIRFYMYEILKALDYCH 147
Query: 249 SRGVLHRDIKGSNLLIDN-NGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGA 307
S G++HRD+K N++ID+ + L++ D+GLA FY P Q RV + +++ PELL+
Sbjct: 148 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP--GQEYNVRVASRYFKGPELLVDY 205
Query: 308 TYYGTAVDLWSTGCILAEL-YAGKPIMPGRTEVEQLHKIFKLCGSPS-EDYWRKSKLPHA 365
Y ++D+WS GC+LA + + +P G +QL +I K+ G+ DY K +
Sbjct: 206 QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELD 265
Query: 366 TIFK------PQQPYKRCVAETFKDFPAP-ALALMETLLSIDPADRGSAASALRSEFF 416
F ++ ++R V + +P AL ++ LL D R +A A+ +F
Sbjct: 266 PRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 323
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 125/238 (52%), Gaps = 17/238 (7%)
Query: 190 NVIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCH 248
N+I L +V +S + LVFE++ + D L ++ ++ YM ++L LD+CH
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQ----TLTDYDIRFYMYEILKALDYCH 148
Query: 249 SRGVLHRDIKGSNLLIDN-NGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGA 307
S G++HRD+K N++ID+ + L++ D+GLA FY P Q RV + +++ PELL+
Sbjct: 149 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP--GQEYNVRVASRYFKGPELLVDY 206
Query: 308 TYYGTAVDLWSTGCILAEL-YAGKPIMPGRTEVEQLHKIFKLCGSPS-EDYWRKSKLPHA 365
Y ++D+WS GC+LA + + +P G +QL +I K+ G+ DY K +
Sbjct: 207 QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELD 266
Query: 366 TIFK------PQQPYKRCVAETFKDFPAP-ALALMETLLSIDPADRGSAASALRSEFF 416
F ++ ++R V + +P AL ++ LL D R +A A+ +F
Sbjct: 267 PRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/217 (35%), Positives = 106/217 (48%), Gaps = 7/217 (3%)
Query: 130 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRF-MAREIHILRRLDH 188
+ FE +G+G + NVY AR+ K I+ALK + LE V + RE+ I L H
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 189 INVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCH 248
N+++L G + +YL+ EY KF E + Y+ +L L +CH
Sbjct: 68 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 249 SRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGAT 308
S+ V+HRDIK NLL+ + G LKIADFG + + L TL Y PPE++ G
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCG---TLDYLPPEMIEGRM 182
Query: 309 YYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKI 345
+ VDLWS G + E GKP T E +I
Sbjct: 183 -HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 218
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 125/238 (52%), Gaps = 17/238 (7%)
Query: 190 NVIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCH 248
N+I L +V +S + LVFE++ + D L ++ ++ YM ++L LD+CH
Sbjct: 91 NIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQ----TLTDYDIRFYMYEILKALDYCH 146
Query: 249 SRGVLHRDIKGSNLLIDN-NGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGA 307
S G++HRD+K N++ID+ + L++ D+GLA FY P Q RV + +++ PELL+
Sbjct: 147 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP--GQEYNVRVASRYFKGPELLVDY 204
Query: 308 TYYGTAVDLWSTGCILAEL-YAGKPIMPGRTEVEQLHKIFKLCGSPS-EDYWRKSKLPHA 365
Y ++D+WS GC+LA + + +P G +QL +I K+ G+ DY K +
Sbjct: 205 QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELD 264
Query: 366 TIFK------PQQPYKRCVAETFKDFPAP-ALALMETLLSIDPADRGSAASALRSEFF 416
F ++ ++R V + +P AL ++ LL D R +A A+ +F
Sbjct: 265 PRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 322
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/217 (35%), Positives = 106/217 (48%), Gaps = 7/217 (3%)
Query: 130 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRF-MAREIHILRRLDH 188
+ FE +G+G + NVY AR+ K I+ALK + LE V + RE+ I L H
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 189 INVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCH 248
N+++L G + +YL+ EY KF E + Y+ +L L +CH
Sbjct: 68 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 249 SRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGAT 308
S+ V+HRDIK NLL+ + G LKIADFG + + L TL Y PPE++ G
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCG---TLDYLPPEMIEGRM 182
Query: 309 YYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKI 345
+ VDLWS G + E GKP T E +I
Sbjct: 183 -HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 218
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 125/238 (52%), Gaps = 17/238 (7%)
Query: 190 NVIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCH 248
N+I L +V +S + LVFE++ + D L ++ ++ YM ++L LD+CH
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQ----TLTDYDIRFYMYEILKALDYCH 148
Query: 249 SRGVLHRDIKGSNLLIDN-NGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGA 307
S G++HRD+K N++ID+ + L++ D+GLA FY P Q RV + +++ PELL+
Sbjct: 149 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP--GQEYNVRVASRYFKGPELLVDY 206
Query: 308 TYYGTAVDLWSTGCILAEL-YAGKPIMPGRTEVEQLHKIFKLCGSPS-EDYWRKSKLPHA 365
Y ++D+WS GC+LA + + +P G +QL +I K+ G+ DY K +
Sbjct: 207 QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELD 266
Query: 366 TIFK------PQQPYKRCVAETFKDFPAP-ALALMETLLSIDPADRGSAASALRSEFF 416
F ++ ++R V + +P AL ++ LL D R +A A+ +F
Sbjct: 267 PRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/217 (35%), Positives = 106/217 (48%), Gaps = 7/217 (3%)
Query: 130 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRF-MAREIHILRRLDH 188
+ FE +G+G + NVY AR+ K I+ALK + LE V + RE+ I L H
Sbjct: 11 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 70
Query: 189 INVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCH 248
N+++L G + +YL+ EY KF E + Y+ +L L +CH
Sbjct: 71 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 249 SRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGAT 308
S+ V+HRDIK NLL+ + G LKIADFG + + L TL Y PPE++ G
Sbjct: 129 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLCG---TLDYLPPEMIEGRM 185
Query: 309 YYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKI 345
+ VDLWS G + E GKP T E +I
Sbjct: 186 -HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 221
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/217 (35%), Positives = 106/217 (48%), Gaps = 7/217 (3%)
Query: 130 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRF-MAREIHILRRLDH 188
+ FE +G+G + NVY AR+ K I+ALK + LE V + RE+ I L H
Sbjct: 11 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 70
Query: 189 INVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCH 248
N+++L G + +YL+ EY KF E + Y+ +L L +CH
Sbjct: 71 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 249 SRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGAT 308
S+ V+HRDIK NLL+ + G LKIADFG + + L TL Y PPE++ G
Sbjct: 129 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCG---TLDYLPPEMIEGRM 185
Query: 309 YYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKI 345
+ VDLWS G + E GKP T E +I
Sbjct: 186 -HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 221
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 73/209 (34%), Positives = 103/209 (49%), Gaps = 7/209 (3%)
Query: 138 IGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRF-MAREIHILRRLDHINVIKLEG 196
+G+G + NVY AR+ K I+ALK + LE V + RE+ I L H N+++L G
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 197 LVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVLHRD 256
+ +YL+ EY +F E + Y+ +L L +CHS+ V+HRD
Sbjct: 80 YFHD--ATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSKRVIHRD 137
Query: 257 IKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGATYYGTAVDL 316
IK NLL+ +NG LKIADFG + + L TL Y PPE++ G + VDL
Sbjct: 138 IKPENLLLGSNGELKIADFGWSVHAPSSRRDTLCG---TLDYLPPEMIEGRM-HDEKVDL 193
Query: 317 WSTGCILAELYAGKPIMPGRTEVEQLHKI 345
WS G + E G P T E +I
Sbjct: 194 WSLGVLCYEFLVGMPPFEAHTYQETYRRI 222
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/225 (36%), Positives = 111/225 (49%), Gaps = 16/225 (7%)
Query: 125 VPRR---ADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRF-MAREI 180
+P+R D F+ + +G+G + NVY AR+ K I+ALK + LE E V + REI
Sbjct: 6 MPKRKFTIDDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREI 65
Query: 181 HILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQL 240
I L H N++++ R L L F L H +F E + +M++L
Sbjct: 66 EIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHG--RFDEQRSATFMEEL 123
Query: 241 LCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVV--TLWY 298
L +CH R V+HRDIK NLL+ G LKIADFG S + P L R + TL Y
Sbjct: 124 ADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGW-SVHAPS----LRRRXMCGTLDY 178
Query: 299 RPPELLLGATYYGTAVDLWSTGCILAELYAGKPIM--PGRTEVEQ 341
PPE++ G T+ VDLW G + E G P P TE +
Sbjct: 179 LPPEMIEGKTH-DEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHR 222
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/194 (34%), Positives = 108/194 (55%), Gaps = 8/194 (4%)
Query: 138 IGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINVIKLEGL 197
IG+G ++ V AR + + VA+K + L P S++ + RE+ I++ L+H N++KL +
Sbjct: 23 IGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 82
Query: 198 VTSRMSCSLYLVFEYME--HDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVLHR 255
+ + + LYLV EY L +H +K EA+ K +Q++ + +CH + ++HR
Sbjct: 83 IETEKT--LYLVMEYASGGEVFDYLVAHGRMKEKEARAK--FRQIVSAVQYCHQKYIVHR 138
Query: 256 DIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGATYYGTAVD 315
D+K NLL+D + +KIADFG ++ + L + + Y PEL G Y G VD
Sbjct: 139 DLKAENLLLDGDMNIKIADFGFSNEFTV--GNKLDTFCGSPPYAAPELFQGKKYDGPEVD 196
Query: 316 LWSTGCILAELYAG 329
+WS G IL L +G
Sbjct: 197 VWSLGVILYTLVSG 210
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 80/225 (35%), Positives = 110/225 (48%), Gaps = 16/225 (7%)
Query: 125 VPRRADSFEKLD---KIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRF-MAREI 180
+P+R + + D +G+G + NVY AR+ K I+ALK + LE E V + REI
Sbjct: 7 MPKRKFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREI 66
Query: 181 HILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQL 240
I L H N++++ R L L F L H +F E + +M++L
Sbjct: 67 EIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHG--RFDEQRSATFMEEL 124
Query: 241 LCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVV--TLWY 298
L +CH R V+HRDIK NLL+ G LKIADFG S + P L R + TL Y
Sbjct: 125 ADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGW-SVHAPS----LRRRXMCGTLDY 179
Query: 299 RPPELLLGATYYGTAVDLWSTGCILAELYAGKPIM--PGRTEVEQ 341
PPE++ G T+ VDLW G + E G P P TE +
Sbjct: 180 LPPEMIEGKTH-DEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHR 223
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 89/303 (29%), Positives = 160/303 (52%), Gaps = 31/303 (10%)
Query: 130 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDH- 188
D +E + K+G+G YS V+ +++ + K L+P + + REI IL+ L
Sbjct: 52 DDYEVVRKVGRGKYSEVFEGINVNNNE-----KCIIKILKPVKKKKIKREIKILQNLXGG 106
Query: 189 INVIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHC 247
N++KL +V + S + L+FEY+ + D L +P L ++ ++ Y+ +LL LD+C
Sbjct: 107 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVL--YPTL--TDYDIRYYIYELLKALDYC 162
Query: 248 HSRGVLHRDIKGSNLLIDNN-GILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLG 306
HS+G++HRD+K N++ID+ L++ D+GLA FY P + RV + +++ PELL+
Sbjct: 163 HSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHP--GKEYNVRVASRYFKGPELLVD 220
Query: 307 ATYYGTAVDLWSTGCILA-ELYAGKPIMPGRTEVEQLHKIFKLCGSPSED-YWRKSKLPH 364
Y ++D+WS GC+ A ++ +P G +QL KI K+ G+ + Y K ++
Sbjct: 221 LQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNAYLNKYRIE- 279
Query: 365 ATIFKPQ----------QPYKRCVAETFKDFPAP-ALALMETLLSIDPADRGSAASALRS 413
PQ +P+ + + + +P A+ ++ LL D +R +A A+
Sbjct: 280 ---LDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTH 336
Query: 414 EFF 416
+F
Sbjct: 337 PYF 339
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/231 (32%), Positives = 114/231 (49%), Gaps = 13/231 (5%)
Query: 125 VPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILR 184
+P RA+ +E L IG G+Y + R KI+ K++ + ++ + + E+++LR
Sbjct: 1 MPSRAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLR 60
Query: 185 RLDHINVIKLEGLVTSRMSCSLYLVFEYME-HDLAGLASHPGLK----FSEAQVKCYMQQ 239
L H N+++ + R + +LY+V EY E DLA + + G K E V M Q
Sbjct: 61 ELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVIT-KGTKERQYLDEEFVLRVMTQ 119
Query: 240 LLCGLDHCHSRG-----VLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVV 294
L L CH R VLHRD+K +N+ +D +K+ DFGLA + D + T V
Sbjct: 120 LTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTF-VG 178
Query: 295 TLWYRPPELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKI 345
T +Y PE + Y D+WS GC+L EL A P ++ E KI
Sbjct: 179 TPYYMSPE-QMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKI 228
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 80/225 (35%), Positives = 110/225 (48%), Gaps = 16/225 (7%)
Query: 125 VPRRADSFEKLD---KIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRF-MAREI 180
+P+R + + D +G+G + NVY AR+ K I+ALK + LE E V + REI
Sbjct: 6 MPKRKFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREI 65
Query: 181 HILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQL 240
I L H N++++ R L L F L H +F E + +M++L
Sbjct: 66 EIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHG--RFDEQRSATFMEEL 123
Query: 241 LCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVV--TLWY 298
L +CH R V+HRDIK NLL+ G LKIADFG S + P L R + TL Y
Sbjct: 124 ADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGW-SVHAPS----LRRRXMCGTLDY 178
Query: 299 RPPELLLGATYYGTAVDLWSTGCILAELYAGKPIM--PGRTEVEQ 341
PPE++ G T+ VDLW G + E G P P TE +
Sbjct: 179 LPPEMIEGKTH-DEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHR 222
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 89/303 (29%), Positives = 160/303 (52%), Gaps = 31/303 (10%)
Query: 130 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDH- 188
D +E + K+G+G YS V+ +++ + K L+P + + REI IL+ L
Sbjct: 31 DDYEVVRKVGRGKYSEVFEGINVNNNE-----KCIIKILKPVKKKKIKREIKILQNLXGG 85
Query: 189 INVIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHC 247
N++KL +V + S + L+FEY+ + D L +P L ++ ++ Y+ +LL LD+C
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVL--YPTL--TDYDIRYYIYELLKALDYC 141
Query: 248 HSRGVLHRDIKGSNLLIDNN-GILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLG 306
HS+G++HRD+K N++ID+ L++ D+GLA FY P + RV + +++ PELL+
Sbjct: 142 HSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHP--GKEYNVRVASRYFKGPELLVD 199
Query: 307 ATYYGTAVDLWSTGCILA-ELYAGKPIMPGRTEVEQLHKIFKLCGSPSED-YWRKSKLPH 364
Y ++D+WS GC+ A ++ +P G +QL KI K+ G+ + Y K ++
Sbjct: 200 LQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIE- 258
Query: 365 ATIFKPQ----------QPYKRCVAETFKDFPAP-ALALMETLLSIDPADRGSAASALRS 413
PQ +P+ + + + +P A+ ++ LL D +R +A A+
Sbjct: 259 ---LDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTH 315
Query: 414 EFF 416
+F
Sbjct: 316 PYF 318
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 111/201 (55%), Gaps = 8/201 (3%)
Query: 131 SFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHIN 190
++ L IG+G ++ V AR + + VA+K + L P S++ + RE+ I++ L+H N
Sbjct: 13 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPN 72
Query: 191 VIKLEGLVTSRMSCSLYLVFEYME--HDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCH 248
++KL ++ + + LYL+ EY L +H +K EA+ K +Q++ + +CH
Sbjct: 73 IVKLFEVIETEKT--LYLIMEYASGGEVFDYLVAHGRMKEKEARSK--FRQIVSAVQYCH 128
Query: 249 SRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGAT 308
+ ++HRD+K NLL+D + +KIADFG ++ + L + + Y PEL G
Sbjct: 129 QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTV--GGKLDTFCGSPPYAAPELFQGKK 186
Query: 309 YYGTAVDLWSTGCILAELYAG 329
Y G VD+WS G IL L +G
Sbjct: 187 YDGPEVDVWSLGVILYTLVSG 207
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 74/231 (32%), Positives = 114/231 (49%), Gaps = 13/231 (5%)
Query: 125 VPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILR 184
+P RA+ +E L IG G+Y + R KI+ K++ + ++ + + E+++LR
Sbjct: 1 MPSRAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLR 60
Query: 185 RLDHINVIKLEGLVTSRMSCSLYLVFEYME-HDLAGLASHPGLK----FSEAQVKCYMQQ 239
L H N+++ + R + +LY+V EY E DLA + + G K E V M Q
Sbjct: 61 ELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVIT-KGTKERQYLDEEFVLRVMTQ 119
Query: 240 LLCGLDHCHSRG-----VLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVV 294
L L CH R VLHRD+K +N+ +D +K+ DFGLA + D++ V
Sbjct: 120 LTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFA-KEFVG 178
Query: 295 TLWYRPPELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKI 345
T +Y PE + Y D+WS GC+L EL A P ++ E KI
Sbjct: 179 TPYYMSPE-QMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKI 228
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 89/303 (29%), Positives = 160/303 (52%), Gaps = 31/303 (10%)
Query: 130 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDH- 188
D +E + K+G+G YS V+ +++ + K L+P + + REI IL+ L
Sbjct: 32 DDYEVVRKVGRGKYSEVFEGINVNNNE-----KCIIKILKPVKKKKIKREIKILQNLXGG 86
Query: 189 INVIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHC 247
N++KL +V + S + L+FEY+ + D L +P L ++ ++ Y+ +LL LD+C
Sbjct: 87 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVL--YPTL--TDYDIRYYIYELLKALDYC 142
Query: 248 HSRGVLHRDIKGSNLLIDNN-GILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLG 306
HS+G++HRD+K N++ID+ L++ D+GLA FY P + RV + +++ PELL+
Sbjct: 143 HSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHP--GKEYNVRVASRYFKGPELLVD 200
Query: 307 ATYYGTAVDLWSTGCILA-ELYAGKPIMPGRTEVEQLHKIFKLCGSPSED-YWRKSKLPH 364
Y ++D+WS GC+ A ++ +P G +QL KI K+ G+ + Y K ++
Sbjct: 201 LQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIE- 259
Query: 365 ATIFKPQ----------QPYKRCVAETFKDFPAP-ALALMETLLSIDPADRGSAASALRS 413
PQ +P+ + + + +P A+ ++ LL D +R +A A+
Sbjct: 260 ---LDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTH 316
Query: 414 EFF 416
+F
Sbjct: 317 PYF 319
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 153/302 (50%), Gaps = 29/302 (9%)
Query: 130 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHI 189
D +E + K+G+G YS V+ +++ + K + + + + +
Sbjct: 31 DDYEVVRKVGRGKYSEVFEGINVNNNE----KCIIKILKPVKKKKIKREIKILQNLMGGP 86
Query: 190 NVIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCH 248
N++KL +V + S + L+FEY+ + D L +P L ++ ++ Y+ +LL LD+CH
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVL--YPTL--TDYDIRYYIYELLKALDYCH 142
Query: 249 SRGVLHRDIKGSNLLIDNN-GILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGA 307
S+G++HRD+K N++ID+ L++ D+GLA FY P + RV + +++ PELL+
Sbjct: 143 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHP--GKEYNVRVASRYFKGPELLVDL 200
Query: 308 TYYGTAVDLWSTGCILA-ELYAGKPIMPGRTEVEQLHKIFKLCGSPSED-YWRKSKLPHA 365
Y ++D+WS GC+ A ++ +P G +QL KI K+ G+ + Y K ++
Sbjct: 201 QDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIE-- 258
Query: 366 TIFKPQ----------QPYKRCVAETFKDFPAP-ALALMETLLSIDPADRGSAASALRSE 414
PQ +P+ + + + +P A+ ++ LL D +R +A A+
Sbjct: 259 --LDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHP 316
Query: 415 FF 416
+F
Sbjct: 317 YF 318
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 89/303 (29%), Positives = 160/303 (52%), Gaps = 31/303 (10%)
Query: 130 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDH- 188
D +E + K+G+G YS V+ +++ + K L+P + + REI IL+ L
Sbjct: 31 DDYEVVRKVGRGKYSEVFEGINVNNNE-----KCIIKILKPVKKKKIKREIKILQNLXGG 85
Query: 189 INVIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHC 247
N++KL +V + S + L+FEY+ + D L +P L ++ ++ Y+ +LL LD+C
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVL--YPTL--TDYDIRYYIYELLKALDYC 141
Query: 248 HSRGVLHRDIKGSNLLIDNN-GILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLG 306
HS+G++HRD+K N++ID+ L++ D+GLA FY P + RV + +++ PELL+
Sbjct: 142 HSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHP--GKEYNVRVASRYFKGPELLVD 199
Query: 307 ATYYGTAVDLWSTGCILA-ELYAGKPIMPGRTEVEQLHKIFKLCGSPSED-YWRKSKLPH 364
Y ++D+WS GC+ A ++ +P G +QL KI K+ G+ + Y K ++
Sbjct: 200 LQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIE- 258
Query: 365 ATIFKPQ----------QPYKRCVAETFKDFPAP-ALALMETLLSIDPADRGSAASALRS 413
PQ +P+ + + + +P A+ ++ LL D +R +A A+
Sbjct: 259 ---LDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTH 315
Query: 414 EFF 416
+F
Sbjct: 316 PYF 318
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 89/303 (29%), Positives = 160/303 (52%), Gaps = 31/303 (10%)
Query: 130 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRL-DH 188
D +E + K+G+G YS V+ +++ + K L+P + + REI IL+ L
Sbjct: 33 DDYEVVRKVGRGKYSEVFEGINVNNNE-----KCIIKILKPVKKKKIKREIKILQNLCGG 87
Query: 189 INVIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHC 247
N++KL +V + S + L+FEY+ + D L +P L ++ ++ Y+ +LL LD+C
Sbjct: 88 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVL--YPTL--TDYDIRYYIYELLKALDYC 143
Query: 248 HSRGVLHRDIKGSNLLIDNN-GILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLG 306
HS+G++HRD+K N++ID+ L++ D+GLA FY P + RV + +++ PELL+
Sbjct: 144 HSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHP--GKEYNVRVASRYFKGPELLVD 201
Query: 307 ATYYGTAVDLWSTGCILA-ELYAGKPIMPGRTEVEQLHKIFKLCGSPSED-YWRKSKLPH 364
Y ++D+WS GC+ A ++ +P G +QL KI K+ G+ + Y K ++
Sbjct: 202 LQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIE- 260
Query: 365 ATIFKPQ----------QPYKRCVAETFKDFPAP-ALALMETLLSIDPADRGSAASALRS 413
PQ +P+ + + + +P A+ ++ LL D +R +A A+
Sbjct: 261 ---LDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTH 317
Query: 414 EFF 416
+F
Sbjct: 318 PYF 320
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 89/303 (29%), Positives = 160/303 (52%), Gaps = 31/303 (10%)
Query: 130 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDH- 188
D +E + K+G+G YS V+ +++ + K L+P + + REI IL+ L
Sbjct: 31 DDYEVVRKVGRGKYSEVFEGINVNNNE-----KCIIKILKPVKKKKIKREIKILQNLXGG 85
Query: 189 INVIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHC 247
N++KL +V + S + L+FEY+ + D L +P L ++ ++ Y+ +LL LD+C
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVL--YPTL--TDYDIRYYIYELLKALDYC 141
Query: 248 HSRGVLHRDIKGSNLLIDNN-GILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLG 306
HS+G++HRD+K N++ID+ L++ D+GLA FY P + RV + +++ PELL+
Sbjct: 142 HSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHP--GKEYNVRVASRYFKGPELLVD 199
Query: 307 ATYYGTAVDLWSTGCILA-ELYAGKPIMPGRTEVEQLHKIFKLCGSPSED-YWRKSKLPH 364
Y ++D+WS GC+ A ++ +P G +QL KI K+ G+ + Y K ++
Sbjct: 200 LQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIE- 258
Query: 365 ATIFKPQ----------QPYKRCVAETFKDFPAP-ALALMETLLSIDPADRGSAASALRS 413
PQ +P+ + + + +P A+ ++ LL D +R +A A+
Sbjct: 259 ---LDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTH 315
Query: 414 EFF 416
+F
Sbjct: 316 PYF 318
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 110/201 (54%), Gaps = 8/201 (3%)
Query: 131 SFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHIN 190
++ L IG+G ++ V AR + K VA+K + L S++ + RE+ I++ L+H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 191 VIKLEGLVTSRMSCSLYLVFEYME--HDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCH 248
++KL ++ + + LYLV EY L +H +K EA+ K +Q++ + +CH
Sbjct: 75 IVKLFEVIETEKT--LYLVMEYASGGEVFDYLVAHGRMKEKEARAK--FRQIVSAVQYCH 130
Query: 249 SRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGAT 308
+ ++HRD+K NLL+D + +KIADFG ++ + L + + Y PEL G
Sbjct: 131 QKFIVHRDLKAENLLLDADMNIKIADFGFSNEF--TFGNKLDTFCGSPPYAAPELFQGKK 188
Query: 309 YYGTAVDLWSTGCILAELYAG 329
Y G VD+WS G IL L +G
Sbjct: 189 YDGPEVDVWSLGVILYTLVSG 209
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 89/303 (29%), Positives = 160/303 (52%), Gaps = 31/303 (10%)
Query: 130 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRL-DH 188
D +E + K+G+G YS V+ +++ + K L+P + + REI IL+ L
Sbjct: 32 DDYEVVRKVGRGKYSEVFEGINVNNNE-----KCIIKILKPVKKKKIKREIKILQNLCGG 86
Query: 189 INVIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHC 247
N++KL +V + S + L+FEY+ + D L +P L ++ ++ Y+ +LL LD+C
Sbjct: 87 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVL--YPTL--TDYDIRYYIYELLKALDYC 142
Query: 248 HSRGVLHRDIKGSNLLIDNN-GILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLG 306
HS+G++HRD+K N++ID+ L++ D+GLA FY P + RV + +++ PELL+
Sbjct: 143 HSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHP--GKEYNVRVASRYFKGPELLVD 200
Query: 307 ATYYGTAVDLWSTGCILA-ELYAGKPIMPGRTEVEQLHKIFKLCGSPSED-YWRKSKLPH 364
Y ++D+WS GC+ A ++ +P G +QL KI K+ G+ + Y K ++
Sbjct: 201 LQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIE- 259
Query: 365 ATIFKPQ----------QPYKRCVAETFKDFPAP-ALALMETLLSIDPADRGSAASALRS 413
PQ +P+ + + + +P A+ ++ LL D +R +A A+
Sbjct: 260 ---LDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTH 316
Query: 414 EFF 416
+F
Sbjct: 317 PYF 319
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 74/231 (32%), Positives = 114/231 (49%), Gaps = 13/231 (5%)
Query: 125 VPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILR 184
+P RA+ +E L IG G+Y + R KI+ K++ + ++ + + E+++LR
Sbjct: 1 MPSRAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLR 60
Query: 185 RLDHINVIKLEGLVTSRMSCSLYLVFEYME-HDLAGLASHPGLK----FSEAQVKCYMQQ 239
L H N+++ + R + +LY+V EY E DLA + + G K E V M Q
Sbjct: 61 ELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVIT-KGTKERQYLDEEFVLRVMTQ 119
Query: 240 LLCGLDHCHSRG-----VLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVV 294
L L CH R VLHRD+K +N+ +D +K+ DFGLA + D + + V
Sbjct: 120 LTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFA-KAFVG 178
Query: 295 TLWYRPPELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKI 345
T +Y PE + Y D+WS GC+L EL A P ++ E KI
Sbjct: 179 TPYYMSPE-QMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKI 228
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 110/201 (54%), Gaps = 8/201 (3%)
Query: 131 SFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHIN 190
++ L IG+G ++ V AR + K VA+K + L S++ + RE+ I++ L+H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 191 VIKLEGLVTSRMSCSLYLVFEYME--HDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCH 248
++KL ++ + + LYLV EY L +H +K EA+ K +Q++ + +CH
Sbjct: 75 IVKLFEVIETEKT--LYLVMEYASGGEVFDYLVAHGRMKEKEARAK--FRQIVSAVQYCH 130
Query: 249 SRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGAT 308
+ ++HRD+K NLL+D + +KIADFG ++ + L + + Y PEL G
Sbjct: 131 QKFIVHRDLKAENLLLDADMNIKIADFGFSNEF--TFGNKLDTFCGSPPYAAPELFQGKK 188
Query: 309 YYGTAVDLWSTGCILAELYAG 329
Y G VD+WS G IL L +G
Sbjct: 189 YDGPEVDVWSLGVILYTLVSG 209
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 110/201 (54%), Gaps = 8/201 (3%)
Query: 131 SFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHIN 190
++ L IG+G ++ V AR + + VA+K + L P S++ + RE+ I++ L+H N
Sbjct: 16 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPN 75
Query: 191 VIKLEGLVTSRMSCSLYLVFEYME--HDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCH 248
++KL ++ + + LYL+ EY L +H +K EA+ K +Q++ + +CH
Sbjct: 76 IVKLFEVIETEKT--LYLIMEYASGGEVFDYLVAHGRMKEKEARSK--FRQIVSAVQYCH 131
Query: 249 SRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGAT 308
+ ++HRD+K NLL+D + +KIADFG ++ + L + Y PEL G
Sbjct: 132 QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTV--GGKLDAFCGAPPYAAPELFQGKK 189
Query: 309 YYGTAVDLWSTGCILAELYAG 329
Y G VD+WS G IL L +G
Sbjct: 190 YDGPEVDVWSLGVILYTLVSG 210
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 89/303 (29%), Positives = 160/303 (52%), Gaps = 31/303 (10%)
Query: 130 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRL-DH 188
D +E + K+G+G YS V+ +++ + K L+P + + REI IL+ L
Sbjct: 31 DDYEVVRKVGRGKYSEVFEGINVNNNE-----KCIIKILKPVKKKKIKREIKILQNLCGG 85
Query: 189 INVIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHC 247
N++KL +V + S + L+FEY+ + D L +P L ++ ++ Y+ +LL LD+C
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVL--YPTL--TDYDIRYYIYELLKALDYC 141
Query: 248 HSRGVLHRDIKGSNLLIDNN-GILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLG 306
HS+G++HRD+K N++ID+ L++ D+GLA FY P + RV + +++ PELL+
Sbjct: 142 HSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHP--GKEYNVRVASRYFKGPELLVD 199
Query: 307 ATYYGTAVDLWSTGCILA-ELYAGKPIMPGRTEVEQLHKIFKLCGSPSED-YWRKSKLPH 364
Y ++D+WS GC+ A ++ +P G +QL KI K+ G+ + Y K ++
Sbjct: 200 LQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIE- 258
Query: 365 ATIFKPQ----------QPYKRCVAETFKDFPAP-ALALMETLLSIDPADRGSAASALRS 413
PQ +P+ + + + +P A+ ++ LL D +R +A A+
Sbjct: 259 ---LDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTH 315
Query: 414 EFF 416
+F
Sbjct: 316 PYF 318
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 89/303 (29%), Positives = 160/303 (52%), Gaps = 31/303 (10%)
Query: 130 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRL-DH 188
D +E + K+G+G YS V+ +++ + K L+P + + REI IL+ L
Sbjct: 31 DDYEVVRKVGRGKYSEVFEGINVNNNE-----KCIIKILKPVKKKKIKREIKILQNLCGG 85
Query: 189 INVIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHC 247
N++KL +V + S + L+FEY+ + D L +P L ++ ++ Y+ +LL LD+C
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVL--YPTL--TDYDIRYYIYELLKALDYC 141
Query: 248 HSRGVLHRDIKGSNLLIDNN-GILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLG 306
HS+G++HRD+K N++ID+ L++ D+GLA FY P + RV + +++ PELL+
Sbjct: 142 HSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHP--GKEYNVRVASRYFKGPELLVD 199
Query: 307 ATYYGTAVDLWSTGCILA-ELYAGKPIMPGRTEVEQLHKIFKLCGSPSED-YWRKSKLPH 364
Y ++D+WS GC+ A ++ +P G +QL KI K+ G+ + Y K ++
Sbjct: 200 LQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIE- 258
Query: 365 ATIFKPQ----------QPYKRCVAETFKDFPAP-ALALMETLLSIDPADRGSAASALRS 413
PQ +P+ + + + +P A+ ++ LL D +R +A A+
Sbjct: 259 ---LDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTH 315
Query: 414 EFF 416
+F
Sbjct: 316 PYF 318
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 109/201 (54%), Gaps = 8/201 (3%)
Query: 131 SFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHIN 190
++ L IG+G ++ V AR + K VA+K + L S++ + RE+ I++ L+H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 191 VIKLEGLVTSRMSCSLYLVFEYME--HDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCH 248
++KL ++ + + LYLV EY L +H +K EA+ K +Q++ + +CH
Sbjct: 75 IVKLFEVIETEKT--LYLVMEYASGGEVFDYLVAHGRMKEKEARAK--FRQIVSAVQYCH 130
Query: 249 SRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGAT 308
+ ++HRD+K NLL+D + +KIADFG ++ + L + Y PEL G
Sbjct: 131 QKFIVHRDLKAENLLLDADMNIKIADFGFSNEF--TFGNKLDAFCGAPPYAAPELFQGKK 188
Query: 309 YYGTAVDLWSTGCILAELYAG 329
Y G VD+WS G IL L +G
Sbjct: 189 YDGPEVDVWSLGVILYTLVSG 209
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 110/201 (54%), Gaps = 8/201 (3%)
Query: 131 SFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHIN 190
++ L IG+G ++ V AR + K VA+K + L S++ + RE+ I++ L+H N
Sbjct: 8 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 67
Query: 191 VIKLEGLVTSRMSCSLYLVFEYME--HDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCH 248
++KL ++ + + LYLV EY L +H +K EA+ K +Q++ + +CH
Sbjct: 68 IVKLFEVIETEKT--LYLVMEYASGGEVFDYLVAHGWMKEKEARAK--FRQIVSAVQYCH 123
Query: 249 SRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGAT 308
+ ++HRD+K NLL+D + +KIADFG ++ + L + + Y PEL G
Sbjct: 124 QKFIVHRDLKAENLLLDADMNIKIADFGFSN--EFTFGNKLDTFCGSPPYAAPELFQGKK 181
Query: 309 YYGTAVDLWSTGCILAELYAG 329
Y G VD+WS G IL L +G
Sbjct: 182 YDGPEVDVWSLGVILYTLVSG 202
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 110/201 (54%), Gaps = 8/201 (3%)
Query: 131 SFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHIN 190
++ L IG+G ++ V AR + K VA++ + L S++ + RE+ I++ L+H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 191 VIKLEGLVTSRMSCSLYLVFEYME--HDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCH 248
++KL ++ + + LYLV EY L +H +K EA+ K +Q++ + +CH
Sbjct: 75 IVKLFEVIETEKT--LYLVMEYASGGEVFDYLVAHGRMKEKEARAK--FRQIVSAVQYCH 130
Query: 249 SRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGAT 308
+ ++HRD+K NLL+D + +KIADFG ++ + L + + Y PEL G
Sbjct: 131 QKFIVHRDLKAENLLLDADMNIKIADFGFSNEF--TFGNKLDTFCGSPPYAAPELFQGKK 188
Query: 309 YYGTAVDLWSTGCILAELYAG 329
Y G VD+WS G IL L +G
Sbjct: 189 YDGPEVDVWSLGVILYTLVSG 209
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 118/223 (52%), Gaps = 11/223 (4%)
Query: 129 ADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDH 188
++ ++++ K+G G Y V RD A+K +R ++ S + E+ +L+ LDH
Sbjct: 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDH 95
Query: 189 INVIKLEGLVTSRMSCSLYLVFE-YMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHC 247
N++KL + + YLV E Y +L H +KF+E ++Q+L G+ +
Sbjct: 96 PNIMKLYDFFEDKR--NYYLVMECYKGGELFDEIIHR-MKFNEVDAAVIIKQVLSGVTYL 152
Query: 248 HSRGVLHRDIKGSNLLIDN---NGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELL 304
H ++HRD+K NLL+++ + ++KI DFGL++ + + + + R+ T +Y PE+L
Sbjct: 153 HKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVF--ENQKKMKERLGTAYYIAPEVL 210
Query: 305 LGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFK 347
Y D+WS G IL L AG P G+T+ E L K+ K
Sbjct: 211 --RKKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEK 251
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 109/201 (54%), Gaps = 8/201 (3%)
Query: 131 SFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHIN 190
++ L IG+G ++ V AR + K VA++ + L S++ + RE+ I++ L+H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 191 VIKLEGLVTSRMSCSLYLVFEYME--HDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCH 248
++KL ++ + + LYLV EY L +H +K EA+ K +Q++ + +CH
Sbjct: 75 IVKLFEVIETEKT--LYLVMEYASGGEVFDYLVAHGRMKEKEARAK--FRQIVSAVQYCH 130
Query: 249 SRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGAT 308
+ ++HRD+K NLL+D + +KIADFG ++ + L + Y PEL G
Sbjct: 131 QKFIVHRDLKAENLLLDADMNIKIADFGFSNEF--TFGNKLDEFCGSPPYAAPELFQGKK 188
Query: 309 YYGTAVDLWSTGCILAELYAG 329
Y G VD+WS G IL L +G
Sbjct: 189 YDGPEVDVWSLGVILYTLVSG 209
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 86/272 (31%), Positives = 129/272 (47%), Gaps = 29/272 (10%)
Query: 129 ADSFEKLDKIGQGTYSNVYRARDLD---QKKIVALKKVRFD---------NLEPESVRFM 176
+S+ K+ K+G G Y V ++ + +K I +KK +FD N+E +
Sbjct: 35 GESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEE-I 93
Query: 177 AREIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCY 236
EI +L+ LDH N+IKL + + YLV E+ E KF E
Sbjct: 94 YNEISLLKSLDHPNIIKLFDVFEDKKY--FYLVTEFYEGGELFEQIINRHKFDECDAANI 151
Query: 237 MQQLLCGLDHCHSRGVLHRDIKGSNLLIDN-NGIL--KIADFGLASFYDPDQNQPLTSRV 293
M+Q+L G+ + H ++HRDIK N+L++N N +L KI DFGL+SF+ D L R+
Sbjct: 152 MKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKD--YKLRDRL 209
Query: 294 VTLWYRPPELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPS 353
T +Y PE+L Y D+WS G I+ L G P G+ + + + K+ K G
Sbjct: 210 GTAYYIAPEVL--KKKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEK--GKYY 265
Query: 354 EDY--WRKSKLPHATIFKPQQPY---KRCVAE 380
D+ W+ + K Y KRC AE
Sbjct: 266 FDFNDWKNISDEAKELIKLMLTYDYNKRCTAE 297
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 107/201 (53%), Gaps = 8/201 (3%)
Query: 131 SFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHIN 190
++ L IG+G ++ V AR + K VA+K + L S++ + RE+ I + L+H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPN 74
Query: 191 VIKLEGLVTSRMSCSLYLVFEYME--HDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCH 248
++KL ++ + + LYLV EY L +H K EA+ K +Q++ + +CH
Sbjct: 75 IVKLFEVIETEKT--LYLVXEYASGGEVFDYLVAHGRXKEKEARAK--FRQIVSAVQYCH 130
Query: 249 SRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGAT 308
+ ++HRD+K NLL+D + +KIADFG ++ + L + Y PEL G
Sbjct: 131 QKFIVHRDLKAENLLLDADXNIKIADFGFSNEF--TFGNKLDAFCGAPPYAAPELFQGKK 188
Query: 309 YYGTAVDLWSTGCILAELYAG 329
Y G VD+WS G IL L +G
Sbjct: 189 YDGPEVDVWSLGVILYTLVSG 209
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/228 (34%), Positives = 114/228 (50%), Gaps = 10/228 (4%)
Query: 131 SFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVR-FDNLEPESVRFMAREIHILRRLDHI 189
+F KIG+G +S VYRA L VALKKV+ FD ++ ++ +EI +L++L+H
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHP 92
Query: 190 NVIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLK---FSEAQVKCYMQQLLCGLD 245
NVIK L +V E + DL+ + H + E V Y QL L+
Sbjct: 93 NVIKYYASFIE--DNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALE 150
Query: 246 HCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLL 305
H HSR V+HRDIK +N+ I G++K+ D GL F+ + S V T +Y PE +
Sbjct: 151 HMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFS-SKTTAAHSLVGTPYYMSPE-RI 208
Query: 306 GATYYGTAVDLWSTGCILAELYAGK-PIMPGRTEVEQLHKIFKLCGSP 352
Y D+WS GC+L E+ A + P + + L K + C P
Sbjct: 209 HENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYP 256
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 121/238 (50%), Gaps = 7/238 (2%)
Query: 127 RRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPES-VRFMAREIHILRR 185
+R + F+ +G+G++S V AR+L + A+K + ++ E+ V ++ RE ++ R
Sbjct: 6 KRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSR 65
Query: 186 LDHINVIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGL 244
LDH +KL T + LY Y ++ +L G F E + Y +++ L
Sbjct: 66 LDHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIG-SFDETCTRFYTAEIVSAL 122
Query: 245 DHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVV-TLWYRPPEL 303
++ H +G++HRD+K N+L++ + ++I DFG A P+ Q + V T Y PEL
Sbjct: 123 EYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 182
Query: 304 LLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSK 361
L + ++ DLW+ GCI+ +L AG P E KI KL E ++ K++
Sbjct: 183 LTEKSACKSS-DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR 239
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 121/238 (50%), Gaps = 7/238 (2%)
Query: 127 RRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPES-VRFMAREIHILRR 185
+R + F+ +G+G++S V AR+L + A+K + ++ E+ V ++ RE ++ R
Sbjct: 7 KRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSR 66
Query: 186 LDHINVIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGL 244
LDH +KL T + LY Y ++ +L G F E + Y +++ L
Sbjct: 67 LDHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIG-SFDETCTRFYTAEIVSAL 123
Query: 245 DHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVV-TLWYRPPEL 303
++ H +G++HRD+K N+L++ + ++I DFG A P+ Q + V T Y PEL
Sbjct: 124 EYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 183
Query: 304 LLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSK 361
L + ++ DLW+ GCI+ +L AG P E KI KL E ++ K++
Sbjct: 184 LTEKSACKSS-DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR 240
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 121/238 (50%), Gaps = 7/238 (2%)
Query: 127 RRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPES-VRFMAREIHILRR 185
+R + F+ +G+G++S V AR+L + A+K + ++ E+ V ++ RE ++ R
Sbjct: 5 KRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSR 64
Query: 186 LDHINVIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGL 244
LDH +KL T + LY Y ++ +L G F E + Y +++ L
Sbjct: 65 LDHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIG-SFDETCTRFYTAEIVSAL 121
Query: 245 DHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVV-TLWYRPPEL 303
++ H +G++HRD+K N+L++ + ++I DFG A P+ Q + V T Y PEL
Sbjct: 122 EYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 181
Query: 304 LLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSK 361
L + ++ DLW+ GCI+ +L AG P E KI KL E ++ K++
Sbjct: 182 LTEKSACKSS-DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR 238
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 121/238 (50%), Gaps = 7/238 (2%)
Query: 127 RRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPES-VRFMAREIHILRR 185
+R + F+ +G+G++S V AR+L + A+K + ++ E+ V ++ RE ++ R
Sbjct: 4 KRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSR 63
Query: 186 LDHINVIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGL 244
LDH +KL T + LY Y ++ +L G F E + Y +++ L
Sbjct: 64 LDHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIG-SFDETCTRFYTAEIVSAL 120
Query: 245 DHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVV-TLWYRPPEL 303
++ H +G++HRD+K N+L++ + ++I DFG A P+ Q + V T Y PEL
Sbjct: 121 EYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 180
Query: 304 LLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSK 361
L + ++ DLW+ GCI+ +L AG P E KI KL E ++ K++
Sbjct: 181 LTEKSACKSS-DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR 237
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 104/205 (50%), Gaps = 8/205 (3%)
Query: 129 ADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLE--PESVRFMAREIHILRRL 186
+ ++ + +G+G Y V A + ++ VA+K V PE+++ +EI I + L
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK---KEICINKML 61
Query: 187 DHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDH 246
+H NV+K G R YL EY P + E + + QL+ G+ +
Sbjct: 62 NHENVVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 247 CHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVV-TLWYRPPELLL 305
H G+ HRDIK NLL+D LKI+DFGLA+ + + + L +++ TL Y PELL
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 306 GATYYGTAVDLWSTGCILAELYAGK 330
++ VD+WS G +L + AG+
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 104/205 (50%), Gaps = 8/205 (3%)
Query: 129 ADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLE--PESVRFMAREIHILRRL 186
+ ++ + +G+G Y V A + ++ VA+K V PE+++ +EI I + L
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK---KEICINKML 62
Query: 187 DHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDH 246
+H NV+K G R YL EY P + E + + QL+ G+ +
Sbjct: 63 NHENVVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 247 CHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVV-TLWYRPPELLL 305
H G+ HRDIK NLL+D LKI+DFGLA+ + + + L +++ TL Y PELL
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 306 GATYYGTAVDLWSTGCILAELYAGK 330
++ VD+WS G +L + AG+
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 116/227 (51%), Gaps = 7/227 (3%)
Query: 138 IGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPES-VRFMAREIHILRRLDHINVIKLEG 196
+G+G++S V AR+L + A+K + ++ E+ V ++ RE ++ RLDH +KL
Sbjct: 41 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL-- 98
Query: 197 LVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVLHR 255
T + LY Y ++ +L G F E + Y +++ L++ H +G++HR
Sbjct: 99 YFTFQDDEKLYFGLSYAKNGELLKYIRKIG-SFDETCTRFYTAEIVSALEYLHGKGIIHR 157
Query: 256 DIKGSNLLIDNNGILKIADFGLASFYDPDQNQP-LTSRVVTLWYRPPELLLGATYYGTAV 314
D+K N+L++ + ++I DFG A P+ Q S V T Y PELL + ++
Sbjct: 158 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSS- 216
Query: 315 DLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSK 361
DLW+ GCI+ +L AG P E KI KL E ++ K++
Sbjct: 217 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR 263
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 116/227 (51%), Gaps = 7/227 (3%)
Query: 138 IGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPES-VRFMAREIHILRRLDHINVIKLEG 196
+G+G++S V AR+L + A+K + ++ E+ V ++ RE ++ RLDH +KL
Sbjct: 41 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL-- 98
Query: 197 LVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVLHR 255
T + LY Y ++ +L G F E + Y +++ L++ H +G++HR
Sbjct: 99 YFTFQDDEKLYFGLSYAKNGELLKYIRKIG-SFDETCTRFYTAEIVSALEYLHGKGIIHR 157
Query: 256 DIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVV-TLWYRPPELLLGATYYGTAV 314
D+K N+L++ + ++I DFG A P+ Q + V T Y PELL + ++
Sbjct: 158 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS- 216
Query: 315 DLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSK 361
DLW+ GCI+ +L AG P E KI KL E ++ K++
Sbjct: 217 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR 263
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 116/227 (51%), Gaps = 7/227 (3%)
Query: 138 IGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPES-VRFMAREIHILRRLDHINVIKLEG 196
+G+G++S V AR+L + A+K + ++ E+ V ++ RE ++ RLDH +KL
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL-- 97
Query: 197 LVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVLHR 255
T + LY Y ++ +L G F E + Y +++ L++ H +G++HR
Sbjct: 98 YFTFQDDEKLYFGLSYAKNGELLKYIRKIG-SFDETCTRFYTAEIVSALEYLHGKGIIHR 156
Query: 256 DIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVV-TLWYRPPELLLGATYYGTAV 314
D+K N+L++ + ++I DFG A P+ Q + V T Y PELL + ++
Sbjct: 157 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS- 215
Query: 315 DLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSK 361
DLW+ GCI+ +L AG P E KI KL E ++ K++
Sbjct: 216 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR 262
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 116/227 (51%), Gaps = 7/227 (3%)
Query: 138 IGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPES-VRFMAREIHILRRLDHINVIKLEG 196
+G+G++S V AR+L + A+K + ++ E+ V ++ RE ++ RLDH +KL
Sbjct: 38 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL-- 95
Query: 197 LVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVLHR 255
T + LY Y ++ +L G F E + Y +++ L++ H +G++HR
Sbjct: 96 YFTFQDDEKLYFGLSYAKNGELLKYIRKIG-SFDETCTRFYTAEIVSALEYLHGKGIIHR 154
Query: 256 DIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVV-TLWYRPPELLLGATYYGTAV 314
D+K N+L++ + ++I DFG A P+ Q + V T Y PELL + ++
Sbjct: 155 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS- 213
Query: 315 DLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSK 361
DLW+ GCI+ +L AG P E KI KL E ++ K++
Sbjct: 214 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR 260
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 116/227 (51%), Gaps = 7/227 (3%)
Query: 138 IGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPES-VRFMAREIHILRRLDHINVIKLEG 196
+G+G++S V AR+L + A+K + ++ E+ V ++ RE ++ RLDH +KL
Sbjct: 38 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL-- 95
Query: 197 LVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVLHR 255
T + LY Y ++ +L G F E + Y +++ L++ H +G++HR
Sbjct: 96 YFTFQDDEKLYFGLSYAKNGELLKYIRKIG-SFDETCTRFYTAEIVSALEYLHGKGIIHR 154
Query: 256 DIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVV-TLWYRPPELLLGATYYGTAV 314
D+K N+L++ + ++I DFG A P+ Q + V T Y PELL + ++
Sbjct: 155 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS- 213
Query: 315 DLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSK 361
DLW+ GCI+ +L AG P E KI KL E ++ K++
Sbjct: 214 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR 260
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 116/227 (51%), Gaps = 7/227 (3%)
Query: 138 IGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPES-VRFMAREIHILRRLDHINVIKLEG 196
+G+G++S V AR+L + A+K + ++ E+ V ++ RE ++ RLDH +KL
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL-- 97
Query: 197 LVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVLHR 255
T + LY Y ++ +L G F E + Y +++ L++ H +G++HR
Sbjct: 98 YFTFQDDEKLYFGLSYAKNGELLKYIRKIG-SFDETCTRFYTAEIVSALEYLHGKGIIHR 156
Query: 256 DIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVV-TLWYRPPELLLGATYYGTAV 314
D+K N+L++ + ++I DFG A P+ Q + V T Y PELL + ++
Sbjct: 157 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS- 215
Query: 315 DLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSK 361
DLW+ GCI+ +L AG P E KI KL E ++ K++
Sbjct: 216 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR 262
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 103/217 (47%), Gaps = 10/217 (4%)
Query: 132 FEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEP-ESVRFMAREIHILRRLDHIN 190
F L +IG G++ VY ARD+ ++VA+KK+ + + E + + +E+ L++L H N
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 191 VIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSR 250
I+ G + +LV EY + L E ++ L GL + HS
Sbjct: 116 TIQYRGCYLREHTA--WLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSH 173
Query: 251 GVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGAT-- 308
++HRD+K N+L+ G++K+ DFG AS P V T ++ PE++L
Sbjct: 174 NMIHRDVKAGNILLSEPGLVKLGDFGSASIM-----APANXFVGTPYWMAPEVILAMDEG 228
Query: 309 YYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKI 345
Y VD+WS G EL KP + + L+ I
Sbjct: 229 QYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHI 265
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 116/227 (51%), Gaps = 7/227 (3%)
Query: 138 IGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPES-VRFMAREIHILRRLDHINVIKLEG 196
+G+G++S V AR+L + A+K + ++ E+ V ++ RE ++ RLDH +KL
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL-- 97
Query: 197 LVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVLHR 255
T + LY Y ++ +L G F E + Y +++ L++ H +G++HR
Sbjct: 98 YFTFQDDEKLYFGLSYAKNGELLKYIRKIG-SFDETCTRFYTAEIVSALEYLHGKGIIHR 156
Query: 256 DIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVV-TLWYRPPELLLGATYYGTAV 314
D+K N+L++ + ++I DFG A P+ Q + V T Y PELL + ++
Sbjct: 157 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS- 215
Query: 315 DLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSK 361
DLW+ GCI+ +L AG P E KI KL E ++ K++
Sbjct: 216 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR 262
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 116/227 (51%), Gaps = 7/227 (3%)
Query: 138 IGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPES-VRFMAREIHILRRLDHINVIKLEG 196
+G+G++S V AR+L + A+K + ++ E+ V ++ RE ++ RLDH +KL
Sbjct: 38 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL-- 95
Query: 197 LVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVLHR 255
T + LY Y ++ +L G F E + Y +++ L++ H +G++HR
Sbjct: 96 YFTFQDDEKLYFGLSYAKNGELLKYIRKIG-SFDETCTRFYTAEIVSALEYLHGKGIIHR 154
Query: 256 DIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVV-TLWYRPPELLLGATYYGTAV 314
D+K N+L++ + ++I DFG A P+ Q + V T Y PELL + ++
Sbjct: 155 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTEKSACKSS- 213
Query: 315 DLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSK 361
DLW+ GCI+ +L AG P E KI KL E ++ K++
Sbjct: 214 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR 260
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 104/205 (50%), Gaps = 8/205 (3%)
Query: 129 ADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLE--PESVRFMAREIHILRRL 186
+ ++ + +G+G Y V A + ++ VA+K V PE+++ +EI I + L
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK---KEIXINKML 61
Query: 187 DHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDH 246
+H NV+K G R YL EY P + E + + QL+ G+ +
Sbjct: 62 NHENVVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 247 CHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVV-TLWYRPPELLL 305
H G+ HRDIK NLL+D LKI+DFGLA+ + + + L +++ TL Y PELL
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 306 GATYYGTAVDLWSTGCILAELYAGK 330
++ VD+WS G +L + AG+
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 104/205 (50%), Gaps = 8/205 (3%)
Query: 129 ADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLE--PESVRFMAREIHILRRL 186
+ ++ + +G+G Y V A + ++ VA+K V PE+++ +EI I + L
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK---KEICINKML 62
Query: 187 DHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDH 246
+H NV+K G R YL EY P + E + + QL+ G+ +
Sbjct: 63 NHENVVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 247 CHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVV-TLWYRPPELLL 305
H G+ HRDIK NLL+D LKI+DFGLA+ + + + L +++ TL Y PELL
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 306 GATYYGTAVDLWSTGCILAELYAGK 330
++ VD+WS G +L + AG+
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 104/205 (50%), Gaps = 8/205 (3%)
Query: 129 ADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLE--PESVRFMAREIHILRRL 186
+ ++ + +G+G Y V A + ++ VA+K V PE+++ +EI I + L
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK---KEICINKML 62
Query: 187 DHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDH 246
+H NV+K G R YL EY P + E + + QL+ G+ +
Sbjct: 63 NHENVVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 247 CHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVV-TLWYRPPELLL 305
H G+ HRDIK NLL+D LKI+DFGLA+ + + + L +++ TL Y PELL
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 306 GATYYGTAVDLWSTGCILAELYAGK 330
++ VD+WS G +L + AG+
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 104/205 (50%), Gaps = 8/205 (3%)
Query: 129 ADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLE--PESVRFMAREIHILRRL 186
+ ++ + +G+G Y V A + ++ VA+K V PE+++ +EI I + L
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK---KEICINKML 62
Query: 187 DHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDH 246
+H NV+K G R YL EY P + E + + QL+ G+ +
Sbjct: 63 NHENVVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 247 CHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVV-TLWYRPPELLL 305
H G+ HRDIK NLL+D LKI+DFGLA+ + + + L +++ TL Y PELL
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 306 GATYYGTAVDLWSTGCILAELYAGK 330
++ VD+WS G +L + AG+
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 104/205 (50%), Gaps = 8/205 (3%)
Query: 129 ADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLE--PESVRFMAREIHILRRL 186
+ ++ + +G+G Y V A + ++ VA+K V PE+++ +EI I + L
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK---KEIXINKML 61
Query: 187 DHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDH 246
+H NV+K G R YL EY P + E + + QL+ G+ +
Sbjct: 62 NHENVVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 247 CHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVV-TLWYRPPELLL 305
H G+ HRDIK NLL+D LKI+DFGLA+ + + + L +++ TL Y PELL
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLK 179
Query: 306 GATYYGTAVDLWSTGCILAELYAGK 330
++ VD+WS G +L + AG+
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 113/226 (50%), Gaps = 5/226 (2%)
Query: 138 IGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPES-VRFMAREIHILRRLDHINVIKLEG 196
+G+G++S V AR+L + A+K + ++ E+ V ++ RE ++ RLDH +KL
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL-- 97
Query: 197 LVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVLHRD 256
T + LY Y ++ F E + Y +++ L++ H +G++HRD
Sbjct: 98 YFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRD 157
Query: 257 IKGSNLLIDNNGILKIADFGLASFYDPDQNQP-LTSRVVTLWYRPPELLLGATYYGTAVD 315
+K N+L++ + ++I DFG A P+ Q S V T Y PELL + ++ D
Sbjct: 158 LKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSASKSS-D 216
Query: 316 LWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSK 361
LW+ GCI+ +L AG P E KI KL E ++ K++
Sbjct: 217 LWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR 262
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 104/205 (50%), Gaps = 8/205 (3%)
Query: 129 ADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLE--PESVRFMAREIHILRRL 186
+ ++ + +G+G Y V A + ++ VA+K V PE+++ +EI I + L
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK---KEIXINKML 62
Query: 187 DHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDH 246
+H NV+K G R YL EY P + E + + QL+ G+ +
Sbjct: 63 NHENVVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 247 CHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVV-TLWYRPPELLL 305
H G+ HRDIK NLL+D LKI+DFGLA+ + + + L +++ TL Y PELL
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLK 180
Query: 306 GATYYGTAVDLWSTGCILAELYAGK 330
++ VD+WS G +L + AG+
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 116/227 (51%), Gaps = 7/227 (3%)
Query: 138 IGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPES-VRFMAREIHILRRLDHINVIKLEG 196
+G+G++S V AR+L + A+K + ++ E+ V ++ RE ++ RLDH +KL
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL-- 97
Query: 197 LVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVLHR 255
T + LY Y ++ +L G F E + Y +++ L++ H +G++HR
Sbjct: 98 YFTFQDDEKLYFGLSYAKNGELLKYIRKIG-SFDETCTRFYTAEIVSALEYLHGKGIIHR 156
Query: 256 DIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVV-TLWYRPPELLLGATYYGTAV 314
D+K N+L++ + ++I DFG A P+ Q + V T Y PELL + ++
Sbjct: 157 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAXKSS- 215
Query: 315 DLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSK 361
DLW+ GCI+ +L AG P E KI KL E ++ K++
Sbjct: 216 DLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEKFFPKAR 262
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 75/220 (34%), Positives = 110/220 (50%), Gaps = 41/220 (18%)
Query: 137 KIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPES----VRFMAR-------------E 179
K+G G +S V+ A+D+ VA+K VR D + E+ ++ + R
Sbjct: 26 KLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGA 85
Query: 180 IHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLA---SHPGLKFSEAQVKCY 236
HIL+ LDH N G+ + +VFE + +L L H G+ VK
Sbjct: 86 NHILKLLDHFNHKGPNGV-------HVVMVFEVLGENLLALIKKYEHRGIPL--IYVKQI 136
Query: 237 MQQLLCGLDHCHSR-GVLHRDIKGSNLLI------DNNGILKIADFGLASFYDPDQNQPL 289
+QLL GLD+ H R G++H DIK N+L+ +N +KIAD G A +YD +
Sbjct: 137 SKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYD----EHY 192
Query: 290 TSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYAG 329
T+ + T YR PE+LLGA +G D+WST C++ EL G
Sbjct: 193 TNSIQTREYRSPEVLLGAP-WGCGADIWSTACLIFELITG 231
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 104/205 (50%), Gaps = 8/205 (3%)
Query: 129 ADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLE--PESVRFMAREIHILRRL 186
+ ++ + +G+G Y V A + ++ VA+K V PE+++ +EI I + L
Sbjct: 4 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK---KEICINKML 60
Query: 187 DHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDH 246
+H NV+K G R YL EY P + E + + QL+ G+ +
Sbjct: 61 NHENVVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 118
Query: 247 CHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVV-TLWYRPPELLL 305
H G+ HRDIK NLL+D LKI+DFGLA+ + + + L +++ TL Y PELL
Sbjct: 119 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 178
Query: 306 GATYYGTAVDLWSTGCILAELYAGK 330
++ VD+WS G +L + AG+
Sbjct: 179 RREFHAEPVDVWSCGIVLTAMLAGE 203
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 104/205 (50%), Gaps = 8/205 (3%)
Query: 129 ADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLE--PESVRFMAREIHILRRL 186
+ ++ + +G+G Y V A + ++ VA+K V PE+++ +EI I + L
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK---KEICINKML 61
Query: 187 DHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDH 246
+H NV+K G R YL EY P + E + + QL+ G+ +
Sbjct: 62 NHENVVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 247 CHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVV-TLWYRPPELLL 305
H G+ HRDIK NLL+D LKI+DFGLA+ + + + L +++ TL Y PELL
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLK 179
Query: 306 GATYYGTAVDLWSTGCILAELYAGK 330
++ VD+WS G +L + AG+
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 75/220 (34%), Positives = 110/220 (50%), Gaps = 41/220 (18%)
Query: 137 KIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPES----VRFMAR-------------E 179
K+G G +S V+ A+D+ VA+K VR D + E+ ++ + R
Sbjct: 26 KLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGA 85
Query: 180 IHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLA---SHPGLKFSEAQVKCY 236
HIL+ LDH N G+ + +VFE + +L L H G+ VK
Sbjct: 86 NHILKLLDHFNHKGPNGV-------HVVMVFEVLGENLLALIKKYEHRGIPL--IYVKQI 136
Query: 237 MQQLLCGLDHCHSR-GVLHRDIKGSNLLI------DNNGILKIADFGLASFYDPDQNQPL 289
+QLL GLD+ H R G++H DIK N+L+ +N +KIAD G A +YD +
Sbjct: 137 SKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYD----EHY 192
Query: 290 TSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYAG 329
T+ + T YR PE+LLGA +G D+WST C++ EL G
Sbjct: 193 TNSIQTREYRSPEVLLGAP-WGCGADIWSTACLIFELITG 231
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 104/205 (50%), Gaps = 8/205 (3%)
Query: 129 ADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLE--PESVRFMAREIHILRRL 186
+ ++ + +G+G Y V A + ++ VA+K V PE+++ +EI I + L
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK---KEICINKML 61
Query: 187 DHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDH 246
+H NV+K G R YL EY P + E + + QL+ G+ +
Sbjct: 62 NHENVVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 247 CHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVV-TLWYRPPELLL 305
H G+ HRDIK NLL+D LKI+DFGLA+ + + + L +++ TL Y PELL
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 306 GATYYGTAVDLWSTGCILAELYAGK 330
++ VD+WS G +L + AG+
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 76/220 (34%), Positives = 105/220 (47%), Gaps = 7/220 (3%)
Query: 130 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRF-MAREIHILRRLDH 188
D FE +G+G + NVY AR+ IVALK + +E E V + REI I L H
Sbjct: 23 DDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHH 82
Query: 189 INVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCH 248
N+++L R +YL+ EY F E + M++L L +CH
Sbjct: 83 PNILRLYNYFYDRRR--IYLILEYAPRGELYKELQKSCTFDEQRTATIMEELADALMYCH 140
Query: 249 SRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGAT 308
+ V+HRDIK NLL+ G LKIADFG S + P + + TL Y PPE++ G
Sbjct: 141 GKKVIHRDIKPENLLLGLKGELKIADFGW-SVHAPSLRR--KTMCGTLDYLPPEMIEGRM 197
Query: 309 YYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKL 348
+ VDLW G + EL G P + E +I K+
Sbjct: 198 -HNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIVKV 236
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 116/227 (51%), Gaps = 7/227 (3%)
Query: 138 IGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPES-VRFMAREIHILRRLDHINVIKLEG 196
+G+G++S V AR+L + A+K + ++ E+ V ++ RE ++ RLDH +KL
Sbjct: 22 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL-- 79
Query: 197 LVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVLHR 255
T + LY Y ++ +L G F E + Y +++ L++ H +G++HR
Sbjct: 80 YFTFQDDEKLYFGLSYAKNGELLKYIRKIG-SFDETCTRFYTAEIVSALEYLHGKGIIHR 138
Query: 256 DIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVV-TLWYRPPELLLGATYYGTAV 314
D+K N+L++ + ++I DFG A P+ Q + V T Y PELL + ++
Sbjct: 139 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS- 197
Query: 315 DLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSK 361
DLW+ GCI+ +L AG P E KI KL E ++ K++
Sbjct: 198 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR 244
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 110/214 (51%), Gaps = 7/214 (3%)
Query: 138 IGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPES-VRFMAREIHILRRLDHINVIKLEG 196
+G+G++S V AR+L + A+K + ++ E+ V ++ RE ++ RLDH +KL
Sbjct: 43 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL-- 100
Query: 197 LVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVLHR 255
T + LY Y ++ +L G F E + Y +++ L++ H +G++HR
Sbjct: 101 YFTFQDDEKLYFGLSYAKNGELLKYIRKIG-SFDETCTRFYTAEIVSALEYLHGKGIIHR 159
Query: 256 DIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVV-TLWYRPPELLLGATYYGTAV 314
D+K N+L++ + ++I DFG A P+ Q + V T Y PELL + ++
Sbjct: 160 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS- 218
Query: 315 DLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKL 348
DLW+ GCI+ +L AG P E KI KL
Sbjct: 219 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL 252
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 104/205 (50%), Gaps = 8/205 (3%)
Query: 129 ADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLE--PESVRFMAREIHILRRL 186
+ ++ + +G+G Y V A + ++ VA+K V PE+++ +EI I + L
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK---KEICINKML 61
Query: 187 DHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDH 246
+H NV+K G R YL EY P + E + + QL+ G+ +
Sbjct: 62 NHENVVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 247 CHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVV-TLWYRPPELLL 305
H G+ HRDIK NLL+D LKI+DFGLA+ + + + L +++ TL Y PELL
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLK 179
Query: 306 GATYYGTAVDLWSTGCILAELYAGK 330
++ VD+WS G +L + AG+
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 103/217 (47%), Gaps = 10/217 (4%)
Query: 132 FEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEP-ESVRFMAREIHILRRLDHIN 190
F L +IG G++ VY ARD+ ++VA+KK+ + + E + + +E+ L++L H N
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 191 VIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSR 250
I+ G + +LV EY + L E ++ L GL + HS
Sbjct: 77 TIQYRGCYLREHTA--WLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSH 134
Query: 251 GVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGAT-- 308
++HRD+K N+L+ G++K+ DFG AS P V T ++ PE++L
Sbjct: 135 NMIHRDVKAGNILLSEPGLVKLGDFGSASIM-----APANXFVGTPYWMAPEVILAMDEG 189
Query: 309 YYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKI 345
Y VD+WS G EL KP + + L+ I
Sbjct: 190 QYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHI 226
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 141/307 (45%), Gaps = 35/307 (11%)
Query: 136 DKIGQGTYSNVYRARDLDQ--KKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINVIK 193
D +G+G+Y V D + ++ V + K + P + +EI +LRRL H NVI+
Sbjct: 11 DLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQ 70
Query: 194 LEGLVTSRMSCSLYLVFEYMEHDL-AGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGV 252
L ++ + +Y+V EY + L S P +F Q Y QL+ GL++ HS+G+
Sbjct: 71 LVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQGI 130
Query: 253 LHRDIKGSNLLIDNNGILKIADFGLASFYDP-DQNQPLTSRVVTLWYRPPELLLGA-TYY 310
+H+DIK NLL+ G LKI+ G+A P + + + ++PPE+ G T+
Sbjct: 131 VHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQPPEIANGLDTFS 190
Query: 311 GTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSKLPHATIFKP 370
G VD+WS G L + G + P E + ++K+F+ G S +P
Sbjct: 191 GFKVDIWSAGVTLYNITTG--LYP--FEGDNIYKLFENIGKGS------YAIP------- 233
Query: 371 QQPYKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALRSEFFTMKPLPCD-PSSLP 429
D P L++ +L +PA R S + +F K P + P +P
Sbjct: 234 ------------GDCGPPLSDLLKGMLEYEPAKRFSIRQIRQHSWFRKKHPPAEAPVPIP 281
Query: 430 KYPPSKE 436
P +K+
Sbjct: 282 PSPDTKD 288
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 73/211 (34%), Positives = 107/211 (50%), Gaps = 34/211 (16%)
Query: 138 IGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPE-SVRF---MAREIHILRRLDHINVIK 193
+G+GTY VY RDL + +A+K++ PE R+ + EI + + L H N+++
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEI------PERDSRYSQPLHEEIALHKHLKHKNIVQ 83
Query: 194 LEGLVTSRMSCSLYLVFEYMEHDLAG-----LASHPG-LKFSEAQVKCYMQQLLCGLDHC 247
G + ++ ME G L S G LK +E + Y +Q+L GL +
Sbjct: 84 YLGSFSENGFIKIF-----MEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYL 138
Query: 248 HSRGVLHRDIKGSNLLIDN-NGILKIADFG----LASFYDPDQNQPLTSRVV-TLWYRPP 301
H ++HRDIKG N+LI+ +G+LKI+DFG LA P T TL Y P
Sbjct: 139 HDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGI------NPCTETFTGTLQYMAP 192
Query: 302 ELL-LGATYYGTAVDLWSTGCILAELYAGKP 331
E++ G YG A D+WS GC + E+ GKP
Sbjct: 193 EIIDKGPRGYGKAADIWSLGCTIIEMATGKP 223
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 104/205 (50%), Gaps = 8/205 (3%)
Query: 129 ADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLE--PESVRFMAREIHILRRL 186
+ ++ + +G+G Y V A + ++ VA+K V PE+++ +EI I + L
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK---KEICINKML 62
Query: 187 DHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDH 246
+H NV+K G R YL EY P + E + + QL+ G+ +
Sbjct: 63 NHENVVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 247 CHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVV-TLWYRPPELLL 305
H G+ HRDIK NLL+D LKI+DFGLA+ + + + L +++ TL Y PELL
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 306 GATYYGTAVDLWSTGCILAELYAGK 330
++ VD+WS G +L + AG+
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 116/227 (51%), Gaps = 7/227 (3%)
Query: 138 IGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPES-VRFMAREIHILRRLDHINVIKLEG 196
+G+G++S V AR+L + A+K + ++ E+ V ++ RE ++ RLDH +KL
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL-- 97
Query: 197 LVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVLHR 255
T + LY Y ++ +L G F E + Y +++ L++ H +G++HR
Sbjct: 98 YFTFQDDEKLYFGLSYAKNGELLKYIRKIG-SFDETCTRFYTAEIVSALEYLHGKGIIHR 156
Query: 256 DIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVV-TLWYRPPELLLGATYYGTAV 314
D+K N+L++ + ++I DFG A P+ Q + V T Y PELL + ++
Sbjct: 157 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS- 215
Query: 315 DLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSK 361
DLW+ GCI+ +L AG P E KI KL E ++ K++
Sbjct: 216 DLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEKFFPKAR 262
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 104/205 (50%), Gaps = 8/205 (3%)
Query: 129 ADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLE--PESVRFMAREIHILRRL 186
+ ++ + +G+G Y V A + ++ VA+K V PE+++ +EI I + L
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK---KEICINKML 61
Query: 187 DHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDH 246
+H NV+K G R YL EY P + E + + QL+ G+ +
Sbjct: 62 NHENVVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 247 CHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVV-TLWYRPPELLL 305
H G+ HRDIK NLL+D LKI+DFGLA+ + + + L +++ TL Y PELL
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 306 GATYYGTAVDLWSTGCILAELYAGK 330
++ VD+WS G +L + AG+
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 107/196 (54%), Gaps = 6/196 (3%)
Query: 136 DKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRF-MAREIHILRRLDHINVIKL 194
+ +G+G++ V A ++ VALK + L+ + + REI L+ L H ++IKL
Sbjct: 15 ETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKL 74
Query: 195 EGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVLH 254
++T+ + +V EY +L + +E + + + QQ++C +++CH ++H
Sbjct: 75 YDVITT--PTDIVMVIEYAGGELFDYIVEKK-RMTEDEGRRFFQQIICAIEYCHRHKIVH 131
Query: 255 RDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGATYYGTAV 314
RD+K NLL+D+N +KIADFGL++ D N L + + Y PE++ G Y G V
Sbjct: 132 RDLKPENLLLDDNLNVKIADFGLSNIM-TDGNF-LKTSCGSPNYAAPEVINGKLYAGPEV 189
Query: 315 DLWSTGCILAELYAGK 330
D+WS G +L + G+
Sbjct: 190 DVWSCGIVLYVMLVGR 205
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 104/205 (50%), Gaps = 8/205 (3%)
Query: 129 ADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLE--PESVRFMAREIHILRRL 186
+ ++ + +G+G Y V A + ++ VA+K V PE+++ +EI I + L
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK---KEICINKML 61
Query: 187 DHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDH 246
+H NV+K G R YL EY P + E + + QL+ G+ +
Sbjct: 62 NHENVVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 247 CHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVV-TLWYRPPELLL 305
H G+ HRDIK NLL+D LKI+DFGLA+ + + + L +++ TL Y PELL
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 306 GATYYGTAVDLWSTGCILAELYAGK 330
++ VD+WS G +L + AG+
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 116/227 (51%), Gaps = 7/227 (3%)
Query: 138 IGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPES-VRFMAREIHILRRLDHINVIKLEG 196
+G+G++S V AR+L + A+K + ++ E+ V ++ RE ++ RLDH +KL
Sbjct: 37 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL-- 94
Query: 197 LVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVLHR 255
T + LY Y ++ +L G F E + Y +++ L++ H +G++HR
Sbjct: 95 YFTFQDDEKLYFGLSYAKNGELLKYIRKIG-SFDETCTRFYTAEIVSALEYLHGKGIIHR 153
Query: 256 DIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVV-TLWYRPPELLLGATYYGTAV 314
D+K N+L++ + ++I DFG A P+ Q + V T Y PELL + ++
Sbjct: 154 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSS- 212
Query: 315 DLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSK 361
DLW+ GCI+ +L AG P E KI KL E ++ K++
Sbjct: 213 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR 259
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 114/212 (53%), Gaps = 11/212 (5%)
Query: 138 IGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINVIKLEGL 197
+G+G++ V + +D ++ A+K + + + + + RE+ +L++LDH N++KL +
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 198 VTSRMSCSLYLVFE-YMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVLHRD 256
+ S S Y+V E Y +L +FSE ++Q+ G+ + H ++HRD
Sbjct: 90 LED--SSSFYIVGELYTGGELFDEIIKRK-RFSEHDAARIIKQVFSGITYMHKHNIVHRD 146
Query: 257 IKGSNLLIDN---NGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGATYYGTA 313
+K N+L+++ + +KI DFGL++ + QN + R+ T +Y PE+L G Y
Sbjct: 147 LKPENILLESKEKDCDIKIIDFGLSTCF--QQNTKMKDRIGTAYYIAPEVLRGT--YDEK 202
Query: 314 VDLWSTGCILAELYAGKPIMPGRTEVEQLHKI 345
D+WS G IL L +G P G+ E + L ++
Sbjct: 203 CDVWSAGVILYILLSGTPPFYGKNEYDILKRV 234
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 116/227 (51%), Gaps = 7/227 (3%)
Query: 138 IGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPES-VRFMAREIHILRRLDHINVIKLEG 196
+G+G++S V AR+L + A+K + ++ E+ V ++ RE ++ RLDH +KL
Sbjct: 37 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL-- 94
Query: 197 LVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVLHR 255
T + LY Y ++ +L G F E + Y +++ L++ H +G++HR
Sbjct: 95 YFTFQDDEKLYFGLSYAKNGELLKYIRKIG-SFDETCTRFYTAEIVSALEYLHGKGIIHR 153
Query: 256 DIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVV-TLWYRPPELLLGATYYGTAV 314
D+K N+L++ + ++I DFG A P+ Q + V T Y PELL + ++
Sbjct: 154 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS- 212
Query: 315 DLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSK 361
DLW+ GCI+ +L AG P E KI KL E ++ K++
Sbjct: 213 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR 259
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 115/227 (50%), Gaps = 7/227 (3%)
Query: 138 IGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPES-VRFMAREIHILRRLDHINVIKLEG 196
+G+G++S AR+L + A+K + ++ E+ V ++ RE ++ RLDH +KL
Sbjct: 38 LGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL-- 95
Query: 197 LVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVLHR 255
T + LY Y ++ +L G F E + Y +++ L++ H +G++HR
Sbjct: 96 YFTFQDDEKLYFGLSYAKNGELLKYIRKIG-SFDETCTRFYTAEIVSALEYLHGKGIIHR 154
Query: 256 DIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVV-TLWYRPPELLLGATYYGTAV 314
D+K N+L++ + ++I DFG A P+ Q + V T Y PELL + ++
Sbjct: 155 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS- 213
Query: 315 DLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSK 361
DLW+ GCI+ +L AG P E KI KL E ++ K++
Sbjct: 214 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR 260
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 115/227 (50%), Gaps = 7/227 (3%)
Query: 138 IGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPES-VRFMAREIHILRRLDHINVIKLEG 196
+G+G++S V AR+L + A+K + ++ E+ V ++ RE ++ RLDH +KL
Sbjct: 45 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL-- 102
Query: 197 LVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVLHR 255
+ LY Y ++ +L G F E + Y +++ L++ H +G++HR
Sbjct: 103 YFCFQDDEKLYFGLSYAKNGELLKYIRKIG-SFDETCTRFYTAEIVSALEYLHGKGIIHR 161
Query: 256 DIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVV-TLWYRPPELLLGATYYGTAV 314
D+K N+L++ + ++I DFG A P+ Q + V T Y PELL + ++
Sbjct: 162 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS- 220
Query: 315 DLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSK 361
DLW+ GCI+ +L AG P E KI KL E ++ K++
Sbjct: 221 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR 267
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 104/205 (50%), Gaps = 8/205 (3%)
Query: 129 ADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLE--PESVRFMAREIHILRRL 186
+ ++ + +G+G Y V A + ++ VA+K V PE+++ +EI I + L
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK---KEICINKML 61
Query: 187 DHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDH 246
+H NV+K G R YL EY P + E + + QL+ G+ +
Sbjct: 62 NHENVVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 247 CHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVV-TLWYRPPELLL 305
H G+ HRDIK NLL+D LKI+DFGLA+ + + + L +++ TL Y PELL
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 306 GATYYGTAVDLWSTGCILAELYAGK 330
++ VD+WS G +L + AG+
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 104/205 (50%), Gaps = 8/205 (3%)
Query: 129 ADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLE--PESVRFMAREIHILRRL 186
+ ++ + +G+G Y V A + ++ VA+K V PE+++ +EI I + L
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK---KEICINKML 61
Query: 187 DHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDH 246
+H NV+K G R YL EY P + E + + QL+ G+ +
Sbjct: 62 NHENVVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 247 CHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVV-TLWYRPPELLL 305
H G+ HRDIK NLL+D LKI+DFGLA+ + + + L +++ TL Y PELL
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 306 GATYYGTAVDLWSTGCILAELYAGK 330
++ VD+WS G +L + AG+
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 104/205 (50%), Gaps = 8/205 (3%)
Query: 129 ADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLE--PESVRFMAREIHILRRL 186
+ ++ + +G+G Y V A + ++ VA+K V PE+++ +EI I + L
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK---KEICINKML 61
Query: 187 DHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDH 246
+H NV+K G R YL EY P + E + + QL+ G+ +
Sbjct: 62 NHENVVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 247 CHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVV-TLWYRPPELLL 305
H G+ HRDIK NLL+D LKI+DFGLA+ + + + L +++ TL Y PELL
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLK 179
Query: 306 GATYYGTAVDLWSTGCILAELYAGK 330
++ VD+WS G +L + AG+
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 104/205 (50%), Gaps = 8/205 (3%)
Query: 129 ADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLE--PESVRFMAREIHILRRL 186
+ ++ + +G+G Y V A + ++ VA+K V PE+++ +EI I + L
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK---KEICINKML 62
Query: 187 DHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDH 246
+H NV+K G R YL EY P + E + + QL+ G+ +
Sbjct: 63 NHENVVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 247 CHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVV-TLWYRPPELLL 305
H G+ HRDIK NLL+D LKI+DFGLA+ + + + L +++ TL Y PELL
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 306 GATYYGTAVDLWSTGCILAELYAGK 330
++ VD+WS G +L + AG+
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/211 (34%), Positives = 107/211 (50%), Gaps = 34/211 (16%)
Query: 138 IGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPE-SVRF---MAREIHILRRLDHINVIK 193
+G+GTY VY RDL + +A+K++ PE R+ + EI + + L H N+++
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKEI------PERDSRYSQPLHEEIALHKHLKHKNIVQ 69
Query: 194 LEGLVTSRMSCSLYLVFEYMEHDLAG-----LASHPG-LKFSEAQVKCYMQQLLCGLDHC 247
G + ++ ME G L S G LK +E + Y +Q+L GL +
Sbjct: 70 YLGSFSENGFIKIF-----MEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYL 124
Query: 248 HSRGVLHRDIKGSNLLIDN-NGILKIADFG----LASFYDPDQNQPLTSRVV-TLWYRPP 301
H ++HRDIKG N+LI+ +G+LKI+DFG LA P T TL Y P
Sbjct: 125 HDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGI------NPCTETFTGTLQYMAP 178
Query: 302 ELL-LGATYYGTAVDLWSTGCILAELYAGKP 331
E++ G YG A D+WS GC + E+ GKP
Sbjct: 179 EIIDKGPRGYGKAADIWSLGCTIIEMATGKP 209
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 115/220 (52%), Gaps = 9/220 (4%)
Query: 129 ADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDH 188
A+ + + +G+G++ V + +D ++ A+K + + + + + RE+ +L++LDH
Sbjct: 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDH 80
Query: 189 INVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCH 248
N++KL ++ S S Y+V E +FSE ++Q+ G+ + H
Sbjct: 81 PNIMKLFEILED--SSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMH 138
Query: 249 SRGVLHRDIKGSNLLIDN---NGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLL 305
++HRD+K N+L+++ + +KI DFGL++ + QN + R+ T +Y PE+L
Sbjct: 139 KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCF--QQNTKMKDRIGTAYYIAPEVLR 196
Query: 306 GATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKI 345
G Y D+WS G IL L +G P G+ E + L ++
Sbjct: 197 GT--YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRV 234
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 115/220 (52%), Gaps = 9/220 (4%)
Query: 129 ADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDH 188
A+ + + +G+G++ V + +D ++ A+K + + + + + RE+ +L++LDH
Sbjct: 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDH 80
Query: 189 INVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCH 248
N++KL ++ S S Y+V E +FSE ++Q+ G+ + H
Sbjct: 81 PNIMKLFEILED--SSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMH 138
Query: 249 SRGVLHRDIKGSNLLIDN---NGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLL 305
++HRD+K N+L+++ + +KI DFGL++ + QN + R+ T +Y PE+L
Sbjct: 139 KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCF--QQNTKMKDRIGTAYYIAPEVLR 196
Query: 306 GATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKI 345
G Y D+WS G IL L +G P G+ E + L ++
Sbjct: 197 GT--YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRV 234
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 139/292 (47%), Gaps = 36/292 (12%)
Query: 132 FEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINV 191
+ + +KIGQG VY A D+ + VA++++ +P+ + EI ++R + N+
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQ-QPKK-ELIINEILVMRENKNPNI 79
Query: 192 IKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSR 250
+ L + + L++V EY+ L + + + E Q+ ++ L L+ HS
Sbjct: 80 VNY--LDSYLVGDELWVVMEYLAGGSLTDVVTETCM--DEGQIAAVCRECLQALEFLHSN 135
Query: 251 GVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGATYY 310
V+HRDIK N+L+ +G +K+ DFG + P+Q++ ++ V T ++ PE++ Y
Sbjct: 136 QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR-STMVGTPYWMAPEVVTRKA-Y 193
Query: 311 GTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSKLPHATIFKP 370
G VD+WS G + E+ G+P + L+ + G+P +
Sbjct: 194 GPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY-LIATNGTP----------------EL 236
Query: 371 QQPYKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALRSEFFTM-KPL 421
Q P K ++ F+DF + L +D RGSA L+ +F + KPL
Sbjct: 237 QNPEK--LSAIFRDF-------LNRCLDMDVEKRGSAKELLQHQFLKIAKPL 279
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 103/205 (50%), Gaps = 8/205 (3%)
Query: 129 ADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLE--PESVRFMAREIHILRRL 186
+ ++ + +G+G Y V A + ++ VA+K V PE+++ +EI I L
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK---KEICINAML 62
Query: 187 DHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDH 246
+H NV+K G R YL EY P + E + + QL+ G+ +
Sbjct: 63 NHENVVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 247 CHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVV-TLWYRPPELLL 305
H G+ HRDIK NLL+D LKI+DFGLA+ + + + L +++ TL Y PELL
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 306 GATYYGTAVDLWSTGCILAELYAGK 330
++ VD+WS G +L + AG+
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 104/200 (52%), Gaps = 6/200 (3%)
Query: 132 FEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINV 191
F KL+KIG+G++ V++ D +K+VA+K + + E E + +EI +L + D V
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIED-IQQEITVLSQCDSPYV 67
Query: 192 IKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRG 251
K G + L+++ EY+ A PG E Q+ ++++L GLD+ HS
Sbjct: 68 TKYYG--SYLKDTKLWIIMEYLGGGSALDLLEPG-PLDETQIATILREILKGLDYLHSEK 124
Query: 252 VLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGATYYG 311
+HRDIK +N+L+ +G +K+ADFG+A Q + T W P ++ + Y
Sbjct: 125 KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPE--VIKQSAYD 182
Query: 312 TAVDLWSTGCILAELYAGKP 331
+ D+WS G EL G+P
Sbjct: 183 SKADIWSLGITAIELARGEP 202
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 103/390 (26%), Positives = 171/390 (43%), Gaps = 64/390 (16%)
Query: 136 DKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEP-ESVRFMAREIHILRRLDHINVIKL 194
D +G GT+ V + VA+K + + + V + REI L+ H ++IKL
Sbjct: 22 DTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKL 81
Query: 195 EGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVL 253
++++ +++V EY+ +L G + E + + QQ+L G+D+CH V+
Sbjct: 82 YQVIST--PSDIFMVMEYVSGGELFDYICKNG-RLDEKESRRLFQQILSGVDYCHRHMVV 138
Query: 254 HRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGATYYGTA 313
HRD+K N+L+D + KIADFGL++ + L + Y PE++ G Y G
Sbjct: 139 HRDLKPENVLLDAHMNAKIADFGLSNMM--SDGEFLRXSCGSPNYAAPEVISGRLYAGPE 196
Query: 314 VDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGS-PSEDYWRKSKLPHATIFKPQQ 372
VD+WS+G IL L LCG+ P +D +P T+FK
Sbjct: 197 VDIWSSGVILYAL---------------------LCGTLPFDD----DHVP--TLFK--- 226
Query: 373 PYKRC--VAETFKDFPAPALALMETLLSIDPADRGSAASALRSEFFTMKPLPCDPSSLPK 430
K C + T + ++L++ +L +DP R + E+F LPK
Sbjct: 227 --KICDGIFYTPQYLNPSVISLLKHMLQVDPMKRATIKDIREHEWFK--------QDLPK 276
Query: 431 Y--PPSKEFDAKIRDEEARRQGGSKGQRMDLERRGTRESRAIPAPDANA-ELVLS----M 483
Y P + + + D+EA ++ K + + E +R P A A L++ M
Sbjct: 277 YLFPEDPSYSSTMIDDEALKEVCEKFECSEEEVLSCLYNRNHQDPLAVAYHLIIDNRRIM 336
Query: 484 QKRQSQYNSKSRSEKF-------NPHPEEV 506
+ + Y + S + F PHPE V
Sbjct: 337 NEAKDFYLATSPPDSFLDDHHLTRPHPERV 366
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 104/200 (52%), Gaps = 6/200 (3%)
Query: 132 FEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINV 191
F KL+KIG+G++ V++ D +K+VA+K + + E E + +EI +L + D V
Sbjct: 29 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIED-IQQEITVLSQCDSPYV 87
Query: 192 IKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRG 251
K G + L+++ EY+ A PG E Q+ ++++L GLD+ HS
Sbjct: 88 TKYYG--SYLKDTKLWIIMEYLGGGSALDLLEPG-PLDETQIATILREILKGLDYLHSEK 144
Query: 252 VLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGATYYG 311
+HRDIK +N+L+ +G +K+ADFG+A Q + T W P ++ + Y
Sbjct: 145 KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPE--VIKQSAYD 202
Query: 312 TAVDLWSTGCILAELYAGKP 331
+ D+WS G EL G+P
Sbjct: 203 SKADIWSLGITAIELARGEP 222
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 138/292 (47%), Gaps = 36/292 (12%)
Query: 132 FEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINV 191
+ + +KIGQG VY A D+ + VA++++ +P+ + EI ++R + N+
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQ-QPKK-ELIINEILVMRENKNPNI 79
Query: 192 IKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSR 250
+ L + + L++V EY+ L + + + E Q+ ++ L L+ HS
Sbjct: 80 VNY--LDSYLVGDELWVVMEYLAGGSLTDVVTETCM--DEGQIAAVCRECLQALEFLHSN 135
Query: 251 GVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGATYY 310
V+HRDIK N+L+ +G +K+ DFG + P+Q++ + V T ++ PE++ Y
Sbjct: 136 QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR-SEMVGTPYWMAPEVVTRKA-Y 193
Query: 311 GTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSKLPHATIFKP 370
G VD+WS G + E+ G+P + L+ + G+P +
Sbjct: 194 GPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY-LIATNGTP----------------EL 236
Query: 371 QQPYKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALRSEFFTM-KPL 421
Q P K ++ F+DF + L +D RGSA L+ +F + KPL
Sbjct: 237 QNPEK--LSAIFRDF-------LNRCLDMDVEKRGSAKELLQHQFLKIAKPL 279
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 138/292 (47%), Gaps = 36/292 (12%)
Query: 132 FEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINV 191
+ + +KIGQG VY A D+ + VA++++ +P+ + EI ++R + N+
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQ-QPKK-ELIINEILVMRENKNPNI 79
Query: 192 IKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSR 250
+ L + + L++V EY+ L + + + E Q+ ++ L L+ HS
Sbjct: 80 VNY--LDSYLVGDELWVVMEYLAGGSLTDVVTETCM--DEGQIAAVCRECLQALEFLHSN 135
Query: 251 GVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGATYY 310
V+HRDIK N+L+ +G +K+ DFG + P+Q++ + V T ++ PE++ Y
Sbjct: 136 QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR-SXMVGTPYWMAPEVVTRKA-Y 193
Query: 311 GTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSKLPHATIFKP 370
G VD+WS G + E+ G+P + L+ + G+P +
Sbjct: 194 GPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY-LIATNGTP----------------EL 236
Query: 371 QQPYKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALRSEFFTM-KPL 421
Q P K ++ F+DF + L +D RGSA L+ +F + KPL
Sbjct: 237 QNPEK--LSAIFRDF-------LNRCLEMDVEKRGSAKELLQHQFLKIAKPL 279
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 87/338 (25%), Positives = 151/338 (44%), Gaps = 32/338 (9%)
Query: 130 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLD-- 187
D +E IG+G++ V +A D +++ VA+K ++ + R + ++ + D
Sbjct: 35 DRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTE 94
Query: 188 -HINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLK-FSEAQVKCYMQQLLCGLD 245
++ L+ R L LVFE + ++L L + + S + + QQ+ L
Sbjct: 95 MKYYIVHLKRHFMFR--NHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALL 152
Query: 246 HCHS--RGVLHRDIKGSNLLIDN--NGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPP 301
+ ++H D+K N+L+ N +KI DFG + Q + SR +YR P
Sbjct: 153 FLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQXIQSR----FYRSP 208
Query: 302 ELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSK 361
E+LLG Y A+D+WS GCIL E++ G+P+ G EV+Q++KI ++ G P ++
Sbjct: 209 EVLLGMPY-DLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILDQA- 266
Query: 362 LPHATIFKPQQPYKRCVAETFKD----FPAPALALMETLLSIDPADRG---------SAA 408
P A F + P + KD + P + +L ++ G + A
Sbjct: 267 -PKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVA 325
Query: 409 SALRSEFFTMKPLPCDPSS--LPKYPPSKEFDAKIRDE 444
L+ + ++ L DP + P Y F K DE
Sbjct: 326 DYLKFKDLILRMLDYDPKTRIQPYYALQHSFFKKTADE 363
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 131/293 (44%), Gaps = 41/293 (13%)
Query: 136 DKIGQGTYSNVYRA--RDLDQKKIVALKKVRFDNLEPESVRFMA----REIHILRRL-DH 188
D IG+G S V R R + V + +V + L PE + + RE HILR++ H
Sbjct: 100 DVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGH 159
Query: 189 INVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCH 248
++I L + + S ++LVF+ M + SE + + M+ LL + H
Sbjct: 160 PHIITL--IDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLH 217
Query: 249 SRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELL---L 305
+ ++HRD+K N+L+D+N ++++DFG + +P + L T Y PE+L +
Sbjct: 218 ANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEP--GEKLRELCGTPGYLAPEILKCSM 275
Query: 306 GATY--YGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSKLP 363
T+ YG VDLW+ G IL L AG P R ++ L I + S W
Sbjct: 276 DETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSSPEWDDR--- 332
Query: 364 HATIFKPQQPYKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALRSEFF 416
+ T KD L+ LL +DP R +A AL+ FF
Sbjct: 333 ---------------SSTVKD-------LISRLLQVDPEARLTAEQALQHPFF 363
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 107/200 (53%), Gaps = 6/200 (3%)
Query: 132 FEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINV 191
F KL+KIG+G++ V++ D +K+VA+K + + E + + + +EI +L + D V
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAE-DEIEDIQQEITVLSQCDSPYV 82
Query: 192 IKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRG 251
K G + L+++ EY+ A PG E Q+ ++++L GLD+ HS
Sbjct: 83 TKYYG--SYLKDTKLWIIMEYLGGGSALDLLEPG-PLDETQIATILREILKGLDYLHSEK 139
Query: 252 VLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGATYYG 311
+HRDIK +N+L+ +G +K+ADFG+A D V T ++ PE++ + Y
Sbjct: 140 KIHRDIKAANVLLSEHGEVKLADFGVAGQLT-DTQIKRNXFVGTPFWMAPEVIKQSAYDS 198
Query: 312 TAVDLWSTGCILAELYAGKP 331
A D+WS G EL G+P
Sbjct: 199 KA-DIWSLGITAIELARGEP 217
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 103/205 (50%), Gaps = 8/205 (3%)
Query: 129 ADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLE--PESVRFMAREIHILRRL 186
+ ++ + +G+G V A + ++ VA+K V PE+++ +EI I + L
Sbjct: 5 VEDWDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK---KEICINKML 61
Query: 187 DHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDH 246
+H NV+K G R YL EY P + E + + QL+ G+ +
Sbjct: 62 NHENVVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 247 CHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVV-TLWYRPPELLL 305
H G+ HRDIK NLL+D LKI+DFGLA+ + + + L +++ TL Y PELL
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 306 GATYYGTAVDLWSTGCILAELYAGK 330
++ VD+WS G +L + AG+
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 87/338 (25%), Positives = 151/338 (44%), Gaps = 32/338 (9%)
Query: 130 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLD-- 187
D +E IG+G++ V +A D +++ VA+K ++ + R + ++ + D
Sbjct: 54 DRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTE 113
Query: 188 -HINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLK-FSEAQVKCYMQQLLCGLD 245
++ L+ R L LVFE + ++L L + + S + + QQ+ L
Sbjct: 114 MKYYIVHLKRHFMFR--NHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALL 171
Query: 246 HCHS--RGVLHRDIKGSNLLIDN--NGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPP 301
+ ++H D+K N+L+ N +KI DFG + Q + SR +YR P
Sbjct: 172 FLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQXIQSR----FYRSP 227
Query: 302 ELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSK 361
E+LLG Y A+D+WS GCIL E++ G+P+ G EV+Q++KI ++ G P ++
Sbjct: 228 EVLLGMPY-DLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILDQA- 285
Query: 362 LPHATIFKPQQPYKRCVAETFKD----FPAPALALMETLLSIDPADRG---------SAA 408
P A F + P + KD + P + +L ++ G + A
Sbjct: 286 -PKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVA 344
Query: 409 SALRSEFFTMKPLPCDPSS--LPKYPPSKEFDAKIRDE 444
L+ + ++ L DP + P Y F K DE
Sbjct: 345 DYLKFKDLILRMLDYDPKTRIQPYYALQHSFFKKTADE 382
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 138/292 (47%), Gaps = 36/292 (12%)
Query: 132 FEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINV 191
+ + +KIGQG VY A D+ + VA++++ +P+ + EI ++R + N+
Sbjct: 23 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQ-QPKK-ELIINEILVMRENKNPNI 80
Query: 192 IKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSR 250
+ L + + L++V EY+ L + + + E Q+ ++ L L+ HS
Sbjct: 81 VNY--LDSYLVGDELWVVMEYLAGGSLTDVVTETCM--DEGQIAAVCRECLQALEFLHSN 136
Query: 251 GVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGATYY 310
V+HRDIK N+L+ +G +K+ DFG + P+Q++ + V T ++ PE++ Y
Sbjct: 137 QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR-SXMVGTPYWMAPEVVTRKA-Y 194
Query: 311 GTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSKLPHATIFKP 370
G VD+WS G + E+ G+P + L+ + G+P +
Sbjct: 195 GPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY-LIATNGTP----------------EL 237
Query: 371 QQPYKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALRSEFFTM-KPL 421
Q P K ++ F+DF + L +D RGSA ++ +F + KPL
Sbjct: 238 QNPEK--LSAIFRDF-------LNRCLEMDVEKRGSAKELIQHQFLKIAKPL 280
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 107/218 (49%), Gaps = 38/218 (17%)
Query: 130 DSFEKLDKIGQGTYSNV-----------YRARDLDQKKIVALKKVRFDNLEPESVRFMAR 178
D FE++ IG G++ V Y + LD++K+V LK++
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEH----------TLN 90
Query: 179 EIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYM 237
E IL+ ++ ++KLE + + + +LY+V EYM D+ G +FSE + Y
Sbjct: 91 EKRILQAVNFPFLVKLE--FSFKDNSNLYMVMEYMPGGDMFSHLRRIG-RFSEPHARFYA 147
Query: 238 QQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLW 297
Q++ ++ HS +++RD+K NLLID G +K+ADFG A + + R L
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFA--------KRVKGRTWXLC 199
Query: 298 ----YRPPELLLGATYYGTAVDLWSTGCILAELYAGKP 331
Y PE++L Y AVD W+ G ++ E+ AG P
Sbjct: 200 GTPEYLAPEIILSKG-YNKAVDWWALGVLIYEMAAGYP 236
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 106/200 (53%), Gaps = 6/200 (3%)
Query: 132 FEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINV 191
F KL+KIG+G++ V++ D +K+VA+K + + E E + +EI +L + D V
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIED-IQQEITVLSQCDSPYV 67
Query: 192 IKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRG 251
K G + L+++ EY+ A PG E Q+ ++++L GLD+ HS
Sbjct: 68 TKYYG--SYLKDTKLWIIMEYLGGGSALDLLEPG-PLDETQIATILREILKGLDYLHSEK 124
Query: 252 VLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGATYYG 311
+HRDIK +N+L+ +G +K+ADFG+A D V T ++ PE++ + Y
Sbjct: 125 KIHRDIKAANVLLSEHGEVKLADFGVAGQLT-DTQIKRNXFVGTPFWMAPEVIKQSAYDS 183
Query: 312 TAVDLWSTGCILAELYAGKP 331
A D+WS G EL G+P
Sbjct: 184 KA-DIWSLGITAIELARGEP 202
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 107/218 (49%), Gaps = 38/218 (17%)
Query: 130 DSFEKLDKIGQGTYSNV-----------YRARDLDQKKIVALKKVRFDNLEPESVRFMAR 178
D FE++ IG G++ V Y + LD++K+V LK++
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEH----------TLN 90
Query: 179 EIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYM 237
E IL+ ++ ++KLE + + + +LY+V EYM D+ G +FSE + Y
Sbjct: 91 EKRILQAVNFPFLVKLE--FSFKDNSNLYMVMEYMPGGDMFSHLRRIG-RFSEPHARFYA 147
Query: 238 QQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLW 297
Q++ ++ HS +++RD+K NLLID G +K+ADFG A + + R L
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFA--------KRVKGRTWXLC 199
Query: 298 ----YRPPELLLGATYYGTAVDLWSTGCILAELYAGKP 331
Y PE++L Y AVD W+ G ++ E+ AG P
Sbjct: 200 GTPEYLAPEIILSKG-YNKAVDWWALGVLIYEMAAGYP 236
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/338 (25%), Positives = 151/338 (44%), Gaps = 32/338 (9%)
Query: 130 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLD-- 187
D +E IG+G++ V +A D +++ VA+K ++ + R + ++ + D
Sbjct: 54 DRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTE 113
Query: 188 -HINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLK-FSEAQVKCYMQQLLCGLD 245
++ L+ R L LVFE + ++L L + + S + + QQ+ L
Sbjct: 114 MKYYIVHLKRHFMFR--NHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALL 171
Query: 246 HCHS--RGVLHRDIKGSNLLIDN--NGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPP 301
+ ++H D+K N+L+ N +KI DFG + Q + SR +YR P
Sbjct: 172 FLATPELSIIHCDLKPENILLCNPKRXAIKIVDFGSSCQLGQRIYQXIQSR----FYRSP 227
Query: 302 ELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSK 361
E+LLG Y A+D+WS GCIL E++ G+P+ G EV+Q++KI ++ G P ++
Sbjct: 228 EVLLGMPY-DLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILDQA- 285
Query: 362 LPHATIFKPQQPYKRCVAETFKD----FPAPALALMETLLSIDPADRG---------SAA 408
P A F + P + KD + P + +L ++ G + A
Sbjct: 286 -PKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVA 344
Query: 409 SALRSEFFTMKPLPCDPSS--LPKYPPSKEFDAKIRDE 444
L+ + ++ L DP + P Y F K DE
Sbjct: 345 DYLKFKDLILRMLDYDPKTRIQPYYALQHSFFKKTADE 382
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 92/313 (29%), Positives = 141/313 (45%), Gaps = 41/313 (13%)
Query: 126 PRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKV-RFDNLEPESVRFMAREIHILR 184
PR + + +G+G ++ Y D+D K++ A K V + L+P M+ EI I +
Sbjct: 38 PRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHK 97
Query: 185 RLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLK-FSEAQVKCYMQQLLCG 243
LD+ +V+ G +Y+V E + L H K +E + + +M+Q + G
Sbjct: 98 SLDNPHVVGFHGFFED--DDFVYVVLEICRRR-SLLELHKRRKAVTEPEARYFMRQTIQG 154
Query: 244 LDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASF--YDPDQNQPLTSRVVTLWYRPP 301
+ + H+ V+HRD+K NL ++++ +KI DFGLA+ +D ++ + L T Y P
Sbjct: 155 VQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTLCG---TPNYIAP 211
Query: 302 ELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSK 361
E+L + VD+WS GCIL L GKP P T + E Y R
Sbjct: 212 EVLCKKG-HSFEVDIWSLGCILYTLLVGKP--PFETSCLK------------ETYIR--- 253
Query: 362 LPHATIFKPQQPYKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALRSEFFTMKPL 421
I K + R + A AL+ +L DP R S A L EFFT
Sbjct: 254 -----IKKNEYSVPRHINPV-------ASALIRRMLHADPTLRPSVAELLTDEFFTSGYA 301
Query: 422 PCD-PSSLPKYPP 433
P P+S PP
Sbjct: 302 PMRLPTSCLTVPP 314
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 92/313 (29%), Positives = 141/313 (45%), Gaps = 41/313 (13%)
Query: 126 PRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKV-RFDNLEPESVRFMAREIHILR 184
PR + + +G+G ++ Y D+D K++ A K V + L+P M+ EI I +
Sbjct: 38 PRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHK 97
Query: 185 RLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLK-FSEAQVKCYMQQLLCG 243
LD+ +V+ G +Y+V E + L H K +E + + +M+Q + G
Sbjct: 98 SLDNPHVVGFHGFFED--DDFVYVVLEICRRR-SLLELHKRRKAVTEPEARYFMRQTIQG 154
Query: 244 LDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASF--YDPDQNQPLTSRVVTLWYRPP 301
+ + H+ V+HRD+K NL ++++ +KI DFGLA+ +D ++ + L T Y P
Sbjct: 155 VQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXLCG---TPNYIAP 211
Query: 302 ELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSK 361
E+L + VD+WS GCIL L GKP P T + E Y R
Sbjct: 212 EVLCKKG-HSFEVDIWSLGCILYTLLVGKP--PFETSCLK------------ETYIR--- 253
Query: 362 LPHATIFKPQQPYKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALRSEFFTMKPL 421
I K + R + A AL+ +L DP R S A L EFFT
Sbjct: 254 -----IKKNEYSVPRHINPV-------ASALIRRMLHADPTLRPSVAELLTDEFFTSGYA 301
Query: 422 PCD-PSSLPKYPP 433
P P+S PP
Sbjct: 302 PMRLPTSCLTVPP 314
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 92/313 (29%), Positives = 141/313 (45%), Gaps = 41/313 (13%)
Query: 126 PRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKV-RFDNLEPESVRFMAREIHILR 184
PR + + +G+G ++ Y D+D K++ A K V + L+P M+ EI I +
Sbjct: 38 PRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHK 97
Query: 185 RLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLK-FSEAQVKCYMQQLLCG 243
LD+ +V+ G +Y+V E + L H K +E + + +M+Q + G
Sbjct: 98 SLDNPHVVGFHGFFED--DDFVYVVLEICRRR-SLLELHKRRKAVTEPEARYFMRQTIQG 154
Query: 244 LDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASF--YDPDQNQPLTSRVVTLWYRPP 301
+ + H+ V+HRD+K NL ++++ +KI DFGLA+ +D ++ + L T Y P
Sbjct: 155 VQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCG---TPNYIAP 211
Query: 302 ELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSK 361
E+L + VD+WS GCIL L GKP P T + E Y R
Sbjct: 212 EVLCKKG-HSFEVDIWSLGCILYTLLVGKP--PFETSCLK------------ETYIR--- 253
Query: 362 LPHATIFKPQQPYKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALRSEFFTMKPL 421
I K + R + A AL+ +L DP R S A L EFFT
Sbjct: 254 -----IKKNEYSVPRHINPV-------ASALIRRMLHADPTLRPSVAELLTDEFFTSGYA 301
Query: 422 PCD-PSSLPKYPP 433
P P+S PP
Sbjct: 302 PMRLPTSCLTVPP 314
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 100/211 (47%), Gaps = 8/211 (3%)
Query: 132 FEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLE-PESVRFMAREIHILRRLDHIN 190
++ +DK+G G S VY A D VA+K + E E+++ RE+H +L H N
Sbjct: 13 YKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQN 72
Query: 191 VIKLEGLVTSRMSCSLYLVFEYMEHDLAG--LASHPGLKFSEAQVKCYMQQLLCGLDHCH 248
++ + V C YLV EY+E + SH L A + Q+L G+ H H
Sbjct: 73 IVSMID-VDEEDDC-YYLVMEYIEGPTLSEYIESHGPLSVDTA--INFTNQILDGIKHAH 128
Query: 249 SRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGAT 308
++HRDIK N+LID+N LKI DFG+A + T+ Y PE G
Sbjct: 129 DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEA 188
Query: 309 YYGTAVDLWSTGCILAELYAGKPIMPGRTEV 339
D++S G +L E+ G+P G T V
Sbjct: 189 -TDECTDIYSIGIVLYEMLVGEPPFNGETAV 218
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/337 (26%), Positives = 144/337 (42%), Gaps = 64/337 (18%)
Query: 129 ADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDH 188
D ++ +++G+G +S V R + + A K + L + + RE I R L H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 189 INVIKLEGLVTSRMSCSLYLVFEYME-----HDLAGLASHPGLKFSEAQVKCYMQQLLCG 243
N+++L ++ YLVF+ + D+ +SEA +QQ+L
Sbjct: 63 PNIVRLHDSISEE--GFHYLVFDLVTGGELFEDIVAREY-----YSEADASHCIQQILES 115
Query: 244 LDHCHSRGVLHRDIKGSNLLI---DNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRP 300
++HCH G++HRD+K NLL+ +K+ADFGLA DQ Q T Y
Sbjct: 116 VNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQ-QAWFGFAGTPGYLS 174
Query: 301 PELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKS 360
PE+L YG VD+W+ G IL L G P +W +
Sbjct: 175 PEVLRKDP-YGKPVDMWACGVILYILLVGYP-----------------------PFWDED 210
Query: 361 KLPHATIFKPQQPYKRCVAETFKDFPAP--------ALALMETLLSIDPADRGSAASALR 412
+ + Y++ A + DFP+P A L+ +L+I+PA R +A+ AL+
Sbjct: 211 Q---------HRLYQQIKAGAY-DFPSPEWDTVTPEAKDLINKMLTINPAKRITASEALK 260
Query: 413 SEFFTMKPLPCDPSSLPKYPPSKEFDAKIRDEEARRQ 449
P C S++ +E ++ ARR+
Sbjct: 261 ------HPWICQRSTVASMMHRQETVDCLKKFNARRK 291
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 147/300 (49%), Gaps = 42/300 (14%)
Query: 138 IGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVR-FMAREIHILRRLDHINVIKLEG 196
+G+G++ V +D + A+K + ++ ++ + + RE+ +L++LDH N++KL
Sbjct: 57 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYE 116
Query: 197 LVTSRMSCSLYLVFE-YMEHDLAG-LASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVLH 254
+ YLV E Y +L + S +FSE ++Q+L G+ + H ++H
Sbjct: 117 FFEDK--GYFYLVGEVYTGGELFDEIISRK--RFSEVDAARIIRQVLSGITYMHKNKIVH 172
Query: 255 RDIKGSNLLIDN---NGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGATYYG 311
RD+K NLL+++ + ++I DFGL++ ++ ++ + ++ T +Y PE+L G Y
Sbjct: 173 RDLKPENLLLESKSKDANIRIIDFGLSTHFEA--SKKMKDKIGTAYYIAPEVLHGT--YD 228
Query: 312 TAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSKLPHATIFKPQ 371
D+WSTG IL L +G P G E + L K+ K + W+K
Sbjct: 229 EKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKK------------ 276
Query: 372 QPYKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALRSEF---FTMKPLPCDPSSL 428
V+E+ KD L+ +L+ P+ R SA AL E+ +T + + D SL
Sbjct: 277 ------VSESAKD-------LIRKMLTYVPSMRISARDALDHEWIQTYTKEQISVDVPSL 323
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 106/203 (52%), Gaps = 12/203 (5%)
Query: 132 FEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINV 191
F KL++IG+G++ V++ D +++VA+K + + E E + +EI +L + D V
Sbjct: 25 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIED-IQQEITVLSQCDSSYV 83
Query: 192 IKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLK---FSEAQVKCYMQQLLCGLDHCH 248
K G + L+++ EY L G ++ L+ F E Q+ ++++L GLD+ H
Sbjct: 84 TKYYG--SYLKGSKLWIIMEY----LGGGSALDLLRAGPFDEFQIATMLKEILKGLDYLH 137
Query: 249 SRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGAT 308
S +HRDIK +N+L+ G +K+ADFG+A Q + T W P ++ +
Sbjct: 138 SEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPE--VIQQS 195
Query: 309 YYGTAVDLWSTGCILAELYAGKP 331
Y + D+WS G EL G+P
Sbjct: 196 AYDSKADIWSLGITAIELAKGEP 218
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 147/300 (49%), Gaps = 42/300 (14%)
Query: 138 IGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVR-FMAREIHILRRLDHINVIKLEG 196
+G+G++ V +D + A+K + ++ ++ + + RE+ +L++LDH N++KL
Sbjct: 58 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYE 117
Query: 197 LVTSRMSCSLYLVFE-YMEHDLAG-LASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVLH 254
+ YLV E Y +L + S +FSE ++Q+L G+ + H ++H
Sbjct: 118 FFEDK--GYFYLVGEVYTGGELFDEIISRK--RFSEVDAARIIRQVLSGITYMHKNKIVH 173
Query: 255 RDIKGSNLLIDN---NGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGATYYG 311
RD+K NLL+++ + ++I DFGL++ ++ ++ + ++ T +Y PE+L G Y
Sbjct: 174 RDLKPENLLLESKSKDANIRIIDFGLSTHFEA--SKKMKDKIGTAYYIAPEVLHGT--YD 229
Query: 312 TAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSKLPHATIFKPQ 371
D+WSTG IL L +G P G E + L K+ K + W+K
Sbjct: 230 EKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKK------------ 277
Query: 372 QPYKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALRSEF---FTMKPLPCDPSSL 428
V+E+ KD L+ +L+ P+ R SA AL E+ +T + + D SL
Sbjct: 278 ------VSESAKD-------LIRKMLTYVPSMRISARDALDHEWIQTYTKEQISVDVPSL 324
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 139/292 (47%), Gaps = 36/292 (12%)
Query: 132 FEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINV 191
+ + +KIGQG VY A D+ + VA++++ +P+ + EI ++R + N+
Sbjct: 23 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQ-QPKK-ELIINEILVMRENKNPNI 80
Query: 192 IKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSR 250
+ L + + L++V EY+ L + + + E Q+ ++ L L+ HS
Sbjct: 81 VNY--LDSYLVGDELWVVMEYLAGGSLTDVVTETCM--DEGQIAAVCRECLQALEFLHSN 136
Query: 251 GVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGATYY 310
V+HR+IK N+L+ +G +K+ DFG + P+Q++ ++ V T ++ PE++ Y
Sbjct: 137 QVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR-STMVGTPYWMAPEVVTRKA-Y 194
Query: 311 GTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSKLPHATIFKP 370
G VD+WS G + E+ G+P + L+ + G+P +
Sbjct: 195 GPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY-LIATNGTP----------------EL 237
Query: 371 QQPYKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALRSEFFTM-KPL 421
Q P K ++ F+DF + L +D RGSA ++ +F + KPL
Sbjct: 238 QNPEK--LSAIFRDF-------LNRCLEMDVEKRGSAKELIQHQFLKIAKPL 280
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 141/313 (45%), Gaps = 41/313 (13%)
Query: 126 PRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKV-RFDNLEPESVRFMAREIHILR 184
PR + + +G+G ++ Y D+D K++ A K V + L+P M+ EI I +
Sbjct: 22 PRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHK 81
Query: 185 RLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLK-FSEAQVKCYMQQLLCG 243
LD+ +V+ G +Y+V E + L H K +E + + +M+Q + G
Sbjct: 82 SLDNPHVVGFHGFFED--DDFVYVVLEICRRR-SLLELHKRRKAVTEPEARYFMRQTIQG 138
Query: 244 LDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASF--YDPDQNQPLTSRVVTLWYRPP 301
+ + H+ V+HRD+K NL ++++ +KI DFGLA+ +D ++ + L T Y P
Sbjct: 139 VQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCG---TPNYIAP 195
Query: 302 ELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSK 361
E+L + VD+WS GCIL L GKP P T + E Y R K
Sbjct: 196 EVLCKKG-HSFEVDIWSLGCILYTLLVGKP--PFETSCLK------------ETYIRIKK 240
Query: 362 LPHATIFKPQQPYKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALRSEFFTMKPL 421
++ P+ A AL+ +L DP R S A L EFFT
Sbjct: 241 NEYSV---PRH------------INPVASALIRRMLHADPTLRPSVAELLTDEFFTSGYA 285
Query: 422 PCD-PSSLPKYPP 433
P P+S PP
Sbjct: 286 PMRLPTSCLTVPP 298
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 108/220 (49%), Gaps = 9/220 (4%)
Query: 132 FEKLDKIGQGTYSNVYRARDL---DQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDH 188
FE L +GQG++ V+ R + D + A+K ++ L+ E IL ++H
Sbjct: 30 FELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNH 89
Query: 189 INVIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHC 247
V+KL + LYL+ +++ DL S + F+E VK Y+ +L GLDH
Sbjct: 90 PFVVKLH--YAFQTEGKLYLILDFLRGGDLFTRLSKE-VMFTEEDVKFYLAELALGLDHL 146
Query: 248 HSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGA 307
HS G+++RD+K N+L+D G +K+ DFGL+ D + S T+ Y PE ++
Sbjct: 147 HSLGIIYRDLKPENILLDEEGHIKLTDFGLSK-EAIDHEKKAYSFCGTVEYMAPE-VVNR 204
Query: 308 TYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFK 347
+ + D WS G ++ E+ G G+ E + I K
Sbjct: 205 QGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILK 244
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 141/337 (41%), Gaps = 64/337 (18%)
Query: 129 ADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDH 188
D ++ + IG+G +S V R L A K + L + + RE I R L H
Sbjct: 3 TDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 189 INVIKLEGLVTSRMSCSLYLVFEYME-----HDLAGLASHPGLKFSEAQVKCYMQQLLCG 243
N+++L ++ YLVF+ + D+ +SEA +QQ+L
Sbjct: 63 SNIVRLHDSISEEGF--HYLVFDLVTGGELFEDIVAREY-----YSEADASHCIQQILEA 115
Query: 244 LDHCHSRGVLHRDIKGSNLLIDNN---GILKIADFGLASFYDPDQNQPLTSRVVTLWYRP 300
+ HCH GV+HRD+K NLL+ + +K+ADFGLA DQ Q T Y
Sbjct: 116 VLHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQ-QAWFGFAGTPGYLS 174
Query: 301 PELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKS 360
PE+L YG VD+W+ G IL L G P +W +
Sbjct: 175 PEVLRKEA-YGKPVDIWACGVILYILLVGYP-----------------------PFWDED 210
Query: 361 KLPHATIFKPQQPYKRCVAETFKDFPAP--------ALALMETLLSIDPADRGSAASALR 412
+ + Y++ A + DFP+P A L+ +L+I+PA R +A AL+
Sbjct: 211 Q---------HKLYQQIKAGAY-DFPSPEWDTVTPEAKNLINQMLTINPAKRITAHEALK 260
Query: 413 SEFFTMKPLPCDPSSLPKYPPSKEFDAKIRDEEARRQ 449
P C S++ +E ++ ARR+
Sbjct: 261 H------PWVCQRSTVASMMHRQETVECLKKFNARRK 291
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 110/220 (50%), Gaps = 9/220 (4%)
Query: 132 FEKLDKIGQGTYSNVYRARDL---DQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDH 188
FE L +GQG++ V+ + + D +++ A+K ++ L+ E IL ++H
Sbjct: 26 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNH 85
Query: 189 INVIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHC 247
++KL + LYL+ +++ DL S + F+E VK Y+ +L LDH
Sbjct: 86 PFIVKLH--YAFQTEGKLYLILDFLRGGDLFTRLSKE-VMFTEEDVKFYLAELALALDHL 142
Query: 248 HSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGA 307
HS G+++RD+K N+L+D G +K+ DFGL+ D + S T+ Y PE++
Sbjct: 143 HSLGIIYRDLKPENILLDEEGHIKLTDFGLSK-ESIDHEKKAYSFCGTVEYMAPEVVNRR 201
Query: 308 TYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFK 347
+ +A D WS G ++ E+ G G+ E + I K
Sbjct: 202 GHTQSA-DWWSFGVLMFEMLTGTLPFQGKDRKETMTMILK 240
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 89/337 (26%), Positives = 144/337 (42%), Gaps = 64/337 (18%)
Query: 129 ADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDH 188
D ++ +++G+G +S V R + + A K + L + + RE I R L H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 189 INVIKLEGLVTSRMSCSLYLVFEYME-----HDLAGLASHPGLKFSEAQVKCYMQQLLCG 243
N+++L ++ YLVF+ + D+ +SEA +QQ+L
Sbjct: 63 PNIVRLHDSISEE--GFHYLVFDLVTGGELFEDIVAREY-----YSEADASHCIQQILES 115
Query: 244 LDHCHSRGVLHRDIKGSNLLI---DNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRP 300
++HCH G++HRD+K NLL+ +K+ADFGLA DQ Q T Y
Sbjct: 116 VNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQ-QAWFGFAGTPGYLS 174
Query: 301 PELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKS 360
PE+L YG VD+W+ G IL L G P +W +
Sbjct: 175 PEVLRKDP-YGKPVDMWACGVILYILLVGYP-----------------------PFWDED 210
Query: 361 KLPHATIFKPQQPYKRCVAETFKDFPAP--------ALALMETLLSIDPADRGSAASALR 412
+ + Y++ A + DFP+P A L+ +L+I+PA R +A+ AL+
Sbjct: 211 Q---------HRLYQQIKAGAY-DFPSPEWDTVTPEAKDLINKMLTINPAKRITASEALK 260
Query: 413 SEFFTMKPLPCDPSSLPKYPPSKEFDAKIRDEEARRQ 449
P C S++ +E ++ ARR+
Sbjct: 261 ------HPWICQRSTVASMMHRQETVDCLKKFNARRK 291
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 113/225 (50%), Gaps = 14/225 (6%)
Query: 129 ADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVR-FMAREIHILRRLD 187
+D ++++ K+G G Y V +D A+K ++ ++ S + E+ +L++LD
Sbjct: 3 SDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD 62
Query: 188 HINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGL--KFSEAQVKCYMQQLLCGLD 245
H N++KL + + YLV E L L KFSE M+Q+L G
Sbjct: 63 HPNIMKLYEFFEDKRN--YYLVMEVYRG--GELFDEIILRQKFSEVDAAVIMKQVLSGTT 118
Query: 246 HCHSRGVLHRDIKGSNLLIDN---NGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPE 302
+ H ++HRD+K NLL+++ + ++KI DFGL++ ++ + R+ T +Y PE
Sbjct: 119 YLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEV--GGKMKERLGTAYYIAPE 176
Query: 303 LLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFK 347
+L Y D+WS G IL L G P G+T+ E L ++ K
Sbjct: 177 VL--RKKYDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEK 219
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 105/200 (52%), Gaps = 6/200 (3%)
Query: 132 FEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINV 191
F KLD+IG+G++ VY+ D K++VA+K + + E E + +EI +L + D +
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIED-IQQEITVLSQCDSPYI 79
Query: 192 IKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRG 251
+ G + S L+++ EY+ A PG E + ++++L GLD+ HS
Sbjct: 80 TRYFG--SYLKSTKLWIIMEYLGGGSALDLLKPG-PLEETYIATILREILKGLDYLHSER 136
Query: 252 VLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGATYYG 311
+HRDIK +N+L+ G +K+ADFG+A D V T ++ PE++ + Y
Sbjct: 137 KIHRDIKAANVLLSEQGDVKLADFGVAGQLT-DTQIKRNXFVGTPFWMAPEVIKQSAYDF 195
Query: 312 TAVDLWSTGCILAELYAGKP 331
A D+WS G EL G+P
Sbjct: 196 KA-DIWSLGITAIELAKGEP 214
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 147/300 (49%), Gaps = 42/300 (14%)
Query: 138 IGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVR-FMAREIHILRRLDHINVIKLEG 196
+G+G++ V +D + A+K + ++ ++ + + RE+ +L++LDH N++KL
Sbjct: 34 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYE 93
Query: 197 LVTSRMSCSLYLVFE-YMEHDLAG-LASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVLH 254
+ YLV E Y +L + S +FSE ++Q+L G+ + H ++H
Sbjct: 94 FFEDK--GYFYLVGEVYTGGELFDEIISRK--RFSEVDAARIIRQVLSGITYMHKNKIVH 149
Query: 255 RDIKGSNLLIDN---NGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGATYYG 311
RD+K NLL+++ + ++I DFGL++ ++ ++ + ++ T +Y PE+L G Y
Sbjct: 150 RDLKPENLLLESKSKDANIRIIDFGLSTHFEA--SKKMKDKIGTAYYIAPEVLHGT--YD 205
Query: 312 TAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSKLPHATIFKPQ 371
D+WSTG IL L +G P G E + L K+ K + W+K
Sbjct: 206 EKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKK------------ 253
Query: 372 QPYKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALRSEF---FTMKPLPCDPSSL 428
V+E+ KD L+ +L+ P+ R SA AL E+ +T + + D SL
Sbjct: 254 ------VSESAKD-------LIRKMLTYVPSMRISARDALDHEWIQTYTKEQISVDVPSL 300
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 111/223 (49%), Gaps = 10/223 (4%)
Query: 129 ADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVR-FMAREIHILRRLD 187
+D ++++ K+G G Y V +D A+K ++ ++ S + E+ +L++LD
Sbjct: 20 SDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD 79
Query: 188 HINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHC 247
H N++KL + + YLV E KFSE M+Q+L G +
Sbjct: 80 HPNIMKLYEFFEDKRN--YYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYL 137
Query: 248 HSRGVLHRDIKGSNLLIDN---NGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELL 304
H ++HRD+K NLL+++ + ++KI DFGL++ ++ + R+ T +Y PE+L
Sbjct: 138 HKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEV--GGKMKERLGTAYYIAPEVL 195
Query: 305 LGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFK 347
Y D+WS G IL L G P G+T+ E L ++ K
Sbjct: 196 --RKKYDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEK 236
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 121/234 (51%), Gaps = 13/234 (5%)
Query: 130 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHI 189
+ F+ L+K+G+G+Y +VY+A + +IVA+K+V ++ ++ + +EI I+++ D
Sbjct: 29 EVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES----DLQEIIKEISIMQQCDSP 84
Query: 190 NVIKLEGLVTSRMSCSLYLVFEYM-EHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCH 248
+V+K G + + L++V EY ++ + +E ++ +Q L GL++ H
Sbjct: 85 HVVKYYG--SYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLH 142
Query: 249 SRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGAT 308
+HRDIK N+L++ G K+ADFG+A D + T ++ PE++
Sbjct: 143 FMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLT-DXMAKRNXVIGTPFWMAPEVIQEIG 201
Query: 309 YYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSKL 362
Y A D+WS G E+ GK P ++ + IF + +P + RK +L
Sbjct: 202 YNCVA-DIWSLGITAIEMAEGK---PPYADIHPMRAIFMIPTNPPPTF-RKPEL 250
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 110/220 (50%), Gaps = 9/220 (4%)
Query: 132 FEKLDKIGQGTYSNVYRARDL---DQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDH 188
FE L +GQG++ V+ + + D +++ A+K ++ L+ E IL ++H
Sbjct: 27 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNH 86
Query: 189 INVIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHC 247
++KL + LYL+ +++ DL S + F+E VK Y+ +L LDH
Sbjct: 87 PFIVKLH--YAFQTEGKLYLILDFLRGGDLFTRLSKE-VMFTEEDVKFYLAELALALDHL 143
Query: 248 HSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGA 307
HS G+++RD+K N+L+D G +K+ DFGL+ D + S T+ Y PE++
Sbjct: 144 HSLGIIYRDLKPENILLDEEGHIKLTDFGLSK-ESIDHEKKAYSFCGTVEYMAPEVVNRR 202
Query: 308 TYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFK 347
+ +A D WS G ++ E+ G G+ E + I K
Sbjct: 203 GHTQSA-DWWSFGVLMFEMLTGTLPFQGKDRKETMTMILK 241
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 92/164 (56%), Gaps = 7/164 (4%)
Query: 178 REIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLK-FSEAQVKCY 236
+EI IL++LDH NV+KL ++ LY+VFE + + P LK SE Q + Y
Sbjct: 85 QEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQ--GPVMEVPTLKPLSEDQARFY 142
Query: 237 MQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTL 296
Q L+ G+++ H + ++HRDIK SNLL+ +G +KIADFG+++ + + L++ V T
Sbjct: 143 FQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFK-GSDALLSNTVGTP 201
Query: 297 WYRPPELLLGA--TYYGTAVDLWSTGCILAELYAGK-PIMPGRT 337
+ PE L + G A+D+W+ G L G+ P M R
Sbjct: 202 AFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERI 245
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 110/220 (50%), Gaps = 9/220 (4%)
Query: 132 FEKLDKIGQGTYSNVYRARDL---DQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDH 188
FE L +GQG++ V+ + + D +++ A+K ++ L+ E IL ++H
Sbjct: 26 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNH 85
Query: 189 INVIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHC 247
++KL + LYL+ +++ DL S + F+E VK Y+ +L LDH
Sbjct: 86 PFIVKLH--YAFQTEGKLYLILDFLRGGDLFTRLSKE-VMFTEEDVKFYLAELALALDHL 142
Query: 248 HSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGA 307
HS G+++RD+K N+L+D G +K+ DFGL+ D + S T+ Y PE++
Sbjct: 143 HSLGIIYRDLKPENILLDEEGHIKLTDFGLSK-ESIDHEKKAYSFCGTVEYMAPEVVNRR 201
Query: 308 TYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFK 347
+ +A D WS G ++ E+ G G+ E + I K
Sbjct: 202 GHTQSA-DWWSFGVLMFEMLTGTLPFQGKDRKETMTMILK 240
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 117/247 (47%), Gaps = 33/247 (13%)
Query: 127 RRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRL 186
R A FE++ +GQG + V +AR+ + A+KK+R E + + E+ +L L
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRH---TEEKLSTILSEVMLLASL 59
Query: 187 DHINVIK-----------LEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVK 234
+H V++ ++ + + +L++ EY E+ L L L +
Sbjct: 60 NHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYW 119
Query: 235 CYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLAS--------FYDPDQN 286
+Q+L L + HS+G++HRD+K N+ ID + +KI DFGLA QN
Sbjct: 120 RLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQN 179
Query: 287 QP-----LTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQ 341
P LTS + T Y E+L G +Y +D++S G I E+ I P T +E+
Sbjct: 180 LPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEM-----IYPFSTGMER 234
Query: 342 LHKIFKL 348
++ + KL
Sbjct: 235 VNILKKL 241
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 117/247 (47%), Gaps = 33/247 (13%)
Query: 127 RRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRL 186
R A FE++ +GQG + V +AR+ + A+KK+R E + + E+ +L L
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRH---TEEKLSTILSEVMLLASL 59
Query: 187 DHINVIK-----------LEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVK 234
+H V++ ++ + + +L++ EY E+ L L L +
Sbjct: 60 NHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYW 119
Query: 235 CYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLAS--------FYDPDQN 286
+Q+L L + HS+G++HRD+K N+ ID + +KI DFGLA QN
Sbjct: 120 RLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQN 179
Query: 287 QP-----LTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQ 341
P LTS + T Y E+L G +Y +D++S G I E+ I P T +E+
Sbjct: 180 LPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEM-----IYPFSTGMER 234
Query: 342 LHKIFKL 348
++ + KL
Sbjct: 235 VNILKKL 241
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 107/219 (48%), Gaps = 40/219 (18%)
Query: 130 DSFEKLDKIGQGTYSNV-----------YRARDLDQKKIVALKKVRFDNLEPESVRFMAR 178
D FE++ IG G++ V Y + LD++K+V LK++
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEH----------TLN 90
Query: 179 EIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGL--KFSEAQVKCY 236
E IL+ ++ ++KLE + + + +LY+V EY+ + SH +FSE + Y
Sbjct: 91 EKRILQAVNFPFLVKLE--FSFKDNSNLYMVMEYVPG--GEMFSHLRRIGRFSEPHARFY 146
Query: 237 MQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTL 296
Q++ ++ HS +++RD+K NLLID G +K+ADFG A + + R L
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFA--------KRVKGRTWXL 198
Query: 297 W----YRPPELLLGATYYGTAVDLWSTGCILAELYAGKP 331
Y PE++L Y AVD W+ G ++ E+ AG P
Sbjct: 199 CGTPEYLAPEIILSKG-YNKAVDWWALGVLIYEMAAGYP 236
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 101/207 (48%), Gaps = 9/207 (4%)
Query: 128 RADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKV-RFDNLEPESVRFMAREIHILRRL 186
+A+ ++ + IG+G + V R +K+ A+K + +F+ ++ F E I+
Sbjct: 73 KAEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFA 132
Query: 187 DHINVIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLD 245
+ V++L + LY+V EYM DL L S+ + E K Y +++ LD
Sbjct: 133 NSPWVVQL--FCAFQDDKYLYMVMEYMPGGDLVNLMSNYDV--PEKWAKFYTAEVVLALD 188
Query: 246 HCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLL 305
HS G++HRD+K N+L+D +G LK+ADFG D + V T Y PE+L
Sbjct: 189 AIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAVGTPDYISPEVLK 248
Query: 306 ---GATYYGTAVDLWSTGCILAELYAG 329
G YYG D WS G L E+ G
Sbjct: 249 SQGGDGYYGRECDWWSVGVFLFEMLVG 275
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 100/199 (50%), Gaps = 6/199 (3%)
Query: 130 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHI 189
+ + +L KIG+G++ + + + +K++ + + RE+ +L + H
Sbjct: 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHP 83
Query: 190 NVIKLEGLVTSRMSCSLYLVFEYMEH-DLAG-LASHPGLKFSEAQVKCYMQQLLCGLDHC 247
N+++ + + SLY+V +Y E DL + + G+ F E Q+ + Q+ L H
Sbjct: 84 NIVQYRE--SFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHV 141
Query: 248 HSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGA 307
H R +LHRDIK N+ + +G +++ DFG+A + + + + T +Y PE+
Sbjct: 142 HDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLN-STVELARACIGTPYYLSPEICENK 200
Query: 308 TYYGTAVDLWSTGCILAEL 326
Y + D+W+ GC+L EL
Sbjct: 201 PYNNKS-DIWALGCVLYEL 218
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 105/194 (54%), Gaps = 6/194 (3%)
Query: 131 SFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRF-MAREIHILRRLDHI 189
+++ + +G+G++ V A + VALK + L ++ + REI LR L H
Sbjct: 15 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 74
Query: 190 NVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHS 249
++IKL ++ S+ + +V EY ++L K SE + + + QQ++ +++CH
Sbjct: 75 HIIKLYDVIKSK--DEIIMVIEYAGNELFDYIVQRD-KMSEQEARRFFQQIISAVEYCHR 131
Query: 250 RGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGATY 309
++HRD+K NLL+D + +KIADFGL++ D N L + + Y PE++ G Y
Sbjct: 132 HKIVHRDLKPENLLLDEHLNVKIADFGLSNIM-TDGNF-LKTSCGSPNYAAPEVISGKLY 189
Query: 310 YGTAVDLWSTGCIL 323
G VD+WS G IL
Sbjct: 190 AGPEVDVWSCGVIL 203
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 105/194 (54%), Gaps = 6/194 (3%)
Query: 131 SFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRF-MAREIHILRRLDHI 189
+++ + +G+G++ V A + VALK + L ++ + REI LR L H
Sbjct: 14 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 73
Query: 190 NVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHS 249
++IKL ++ S+ + +V EY ++L K SE + + + QQ++ +++CH
Sbjct: 74 HIIKLYDVIKSK--DEIIMVIEYAGNELFDYIVQRD-KMSEQEARRFFQQIISAVEYCHR 130
Query: 250 RGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGATY 309
++HRD+K NLL+D + +KIADFGL++ D N L + + Y PE++ G Y
Sbjct: 131 HKIVHRDLKPENLLLDEHLNVKIADFGLSNIM-TDGNF-LKTSCGSPNYAAPEVISGKLY 188
Query: 310 YGTAVDLWSTGCIL 323
G VD+WS G IL
Sbjct: 189 AGPEVDVWSCGVIL 202
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 133/287 (46%), Gaps = 37/287 (12%)
Query: 132 FEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINV 191
+ KIG+G+ V A K+VA+KK+ + + F E+ I+R H NV
Sbjct: 153 LDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF--NEVVIMRDYQHENV 210
Query: 192 IKLEGLVTSRMSCSLYLVFEYMEHD-LAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSR 250
+++ + + L++V E++E L + +H + +E Q+ +L L H++
Sbjct: 211 VEMYN--SYLVGDELWVVMEFLEGGALTDIVTH--TRMNEEQIAAVCLAVLQALSVLHAQ 266
Query: 251 GVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVV-TLWYRPPELLLGATY 309
GV+HRDIK ++L+ ++G +K++DFG + + P +V T ++ PE L+
Sbjct: 267 GVIHRDIKSDSILLTHDGRVKLSDFGFCAQV--SKEVPRRKXLVGTPYWMAPE-LISRLP 323
Query: 310 YGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSKLPHATIFK 369
YG VD+WS G ++ E+ G+P ++ + I + LP
Sbjct: 324 YGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI-------------RDNLP------ 364
Query: 370 PQQPYKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALRSEFF 416
P+ V+ + K F ++ LL DPA R +AA L+ F
Sbjct: 365 PRLKNLHKVSPSLKGF-------LDRLLVRDPAQRATAAELLKHPFL 404
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 105/194 (54%), Gaps = 6/194 (3%)
Query: 131 SFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRF-MAREIHILRRLDHI 189
+++ + +G+G++ V A + VALK + L ++ + REI LR L H
Sbjct: 9 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 68
Query: 190 NVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHS 249
++IKL ++ S+ + +V EY ++L K SE + + + QQ++ +++CH
Sbjct: 69 HIIKLYDVIKSK--DEIIMVIEYAGNELFDYIVQRD-KMSEQEARRFFQQIISAVEYCHR 125
Query: 250 RGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGATY 309
++HRD+K NLL+D + +KIADFGL++ D N L + + Y PE++ G Y
Sbjct: 126 HKIVHRDLKPENLLLDEHLNVKIADFGLSNIM-TDGNF-LKTSCGSPNYAAPEVISGKLY 183
Query: 310 YGTAVDLWSTGCIL 323
G VD+WS G IL
Sbjct: 184 AGPEVDVWSCGVIL 197
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 105/194 (54%), Gaps = 6/194 (3%)
Query: 131 SFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRF-MAREIHILRRLDHI 189
+++ + +G+G++ V A + VALK + L ++ + REI LR L H
Sbjct: 5 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 64
Query: 190 NVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHS 249
++IKL ++ S+ + +V EY ++L K SE + + + QQ++ +++CH
Sbjct: 65 HIIKLYDVIKSK--DEIIMVIEYAGNELFDYIVQRD-KMSEQEARRFFQQIISAVEYCHR 121
Query: 250 RGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGATY 309
++HRD+K NLL+D + +KIADFGL++ D N L + + Y PE++ G Y
Sbjct: 122 HKIVHRDLKPENLLLDEHLNVKIADFGLSNIM-TDGNF-LKTSCGSPNYAAPEVISGKLY 179
Query: 310 YGTAVDLWSTGCIL 323
G VD+WS G IL
Sbjct: 180 AGPEVDVWSCGVIL 193
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 140/285 (49%), Gaps = 39/285 (13%)
Query: 138 IGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVR-FMAREIHILRRLDHINVIKLEG 196
+G+G++ V +D + A+K + ++ ++ + + RE+ +L++LDH N++KL
Sbjct: 40 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYE 99
Query: 197 LVTSRMSCSLYLVFE-YMEHDLAG-LASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVLH 254
+ YLV E Y +L + S +FSE ++Q+L G+ + H ++H
Sbjct: 100 FFEDK--GYFYLVGEVYTGGELFDEIISRK--RFSEVDAARIIRQVLSGITYMHKNKIVH 155
Query: 255 RDIKGSNLLIDN---NGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGATYYG 311
RD+K NLL+++ + ++I DFGL++ ++ ++ + ++ T +Y PE+L G Y
Sbjct: 156 RDLKPENLLLESKSKDANIRIIDFGLSTHFEA--SKKMKDKIGTAYYIAPEVLHGT--YD 211
Query: 312 TAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSKLPHATIFKPQ 371
D+WSTG IL L +G P G E + L K+ K + W+K
Sbjct: 212 EKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKK------------ 259
Query: 372 QPYKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALRSEFF 416
V+E+ KD L+ +L+ P+ R SA AL E+
Sbjct: 260 ------VSESAKD-------LIRKMLTYVPSMRISARDALDHEWI 291
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 144/300 (48%), Gaps = 42/300 (14%)
Query: 138 IGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVR-FMAREIHILRRLDHINVIKLEG 196
+G+G++ V +D + A+K + ++ ++ + + RE+ +L++LDH N+ KL
Sbjct: 34 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKLYE 93
Query: 197 LVTSRMSCSLYLVFE-YMEHDLAG-LASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVLH 254
+ YLV E Y +L + S +FSE ++Q+L G+ + H ++H
Sbjct: 94 FFEDK--GYFYLVGEVYTGGELFDEIISRK--RFSEVDAARIIRQVLSGITYXHKNKIVH 149
Query: 255 RDIKGSNLLIDN---NGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGATYYG 311
RD+K NLL+++ + ++I DFGL++ ++ ++ ++ T +Y PE+L G Y
Sbjct: 150 RDLKPENLLLESKSKDANIRIIDFGLSTHFEA--SKKXKDKIGTAYYIAPEVLHGT--YD 205
Query: 312 TAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSKLPHATIFKPQ 371
D+WSTG IL L +G P G E + L K+ K + W+K
Sbjct: 206 EKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKK------------ 253
Query: 372 QPYKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALRSEF---FTMKPLPCDPSSL 428
V+E+ KD L+ L+ P+ R SA AL E+ +T + + D SL
Sbjct: 254 ------VSESAKD-------LIRKXLTYVPSXRISARDALDHEWIQTYTKEQISVDVPSL 300
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 107/219 (48%), Gaps = 40/219 (18%)
Query: 130 DSFEKLDKIGQGTYSNV-----------YRARDLDQKKIVALKKVRFDNLEPESVRFMAR 178
D FE++ +G G++ V Y + LD++K+V LK++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEH----------TLN 91
Query: 179 EIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGL--KFSEAQVKCY 236
E IL+ ++ ++KLE + + + +LY+V EY+ + SH +FSE + Y
Sbjct: 92 EKRILQAVNFPFLVKLE--FSFKDNSNLYMVMEYVPG--GEMFSHLRRIGRFSEPHARFY 147
Query: 237 MQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTL 296
Q++ ++ HS +++RD+K NLLID G +++ DFG A + + R TL
Sbjct: 148 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA--------KRVKGRTWTL 199
Query: 297 W----YRPPELLLGATYYGTAVDLWSTGCILAELYAGKP 331
Y PE++L Y AVD W+ G ++ E+ AG P
Sbjct: 200 CGTPEYLAPEIILSKG-YNKAVDWWALGVLIYEMAAGYP 237
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 101/207 (48%), Gaps = 9/207 (4%)
Query: 128 RADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKV-RFDNLEPESVRFMAREIHILRRL 186
+A+ +E + IG+G + V R +K+ A+K + +F+ ++ F E I+
Sbjct: 67 KAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFA 126
Query: 187 DHINVIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLD 245
+ V++L + LY+V EYM DL L S+ + E + Y +++ LD
Sbjct: 127 NSPWVVQL--FYAFQDDRYLYMVMEYMPGGDLVNLMSNYDV--PEKWARFYTAEVVLALD 182
Query: 246 HCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLL 305
HS G +HRD+K N+L+D +G LK+ADFG + + + V T Y PE+L
Sbjct: 183 AIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLK 242
Query: 306 ---GATYYGTAVDLWSTGCILAELYAG 329
G YYG D WS G L E+ G
Sbjct: 243 SQGGDGYYGRECDWWSVGVFLYEMLVG 269
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 101/207 (48%), Gaps = 9/207 (4%)
Query: 128 RADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKV-RFDNLEPESVRFMAREIHILRRL 186
+A+ +E + IG+G + V R +K+ A+K + +F+ ++ F E I+
Sbjct: 72 KAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFA 131
Query: 187 DHINVIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLD 245
+ V++L + LY+V EYM DL L S+ + E + Y +++ LD
Sbjct: 132 NSPWVVQL--FYAFQDDRYLYMVMEYMPGGDLVNLMSNYDV--PEKWARFYTAEVVLALD 187
Query: 246 HCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLL 305
HS G +HRD+K N+L+D +G LK+ADFG + + + V T Y PE+L
Sbjct: 188 AIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLK 247
Query: 306 ---GATYYGTAVDLWSTGCILAELYAG 329
G YYG D WS G L E+ G
Sbjct: 248 SQGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 133/288 (46%), Gaps = 37/288 (12%)
Query: 132 FEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINV 191
+ KIG+G+ V A K+VA+KK+ + + F E+ I+R H NV
Sbjct: 76 LDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF--NEVVIMRDYQHENV 133
Query: 192 IKLEGLVTSRMSCSLYLVFEYMEHD-LAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSR 250
+++ + + L++V E++E L + +H + +E Q+ +L L H++
Sbjct: 134 VEMYN--SYLVGDELWVVMEFLEGGALTDIVTH--TRMNEEQIAAVCLAVLQALSVLHAQ 189
Query: 251 GVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVV-TLWYRPPELLLGATY 309
GV+HRDIK ++L+ ++G +K++DFG + + P +V T ++ PE L+
Sbjct: 190 GVIHRDIKSDSILLTHDGRVKLSDFGFCA--QVSKEVPRRKXLVGTPYWMAPE-LISRLP 246
Query: 310 YGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSKLPHATIFK 369
YG VD+WS G ++ E+ G+P ++ + I + LP
Sbjct: 247 YGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI-------------RDNLP------ 287
Query: 370 PQQPYKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALRSEFFT 417
P+ V+ + K F ++ LL DPA R +AA L+ F
Sbjct: 288 PRLKNLHKVSPSLKGF-------LDRLLVRDPAQRATAAELLKHPFLA 328
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 102/204 (50%), Gaps = 11/204 (5%)
Query: 129 ADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDH 188
+D +E + IG G + RD ++VA+K + E+V+ REI R L H
Sbjct: 17 SDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVK---REIINHRSLRH 73
Query: 189 INVIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHC 247
N+++ + ++ + L +V EY +L + G +FSE + + + QQL+ G+ +C
Sbjct: 74 PNIVRFKEVILT--PTHLAIVMEYASGGELFERICNAG-RFSEDEARFFFQQLISGVSYC 130
Query: 248 HSRGVLHRDIKGSNLLIDNNGI--LKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLL 305
H+ V HRD+K N L+D + LKI DFG + +QP S V T Y PE+LL
Sbjct: 131 HAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSK-SSVLHSQP-KSTVGTPAYIAPEVLL 188
Query: 306 GATYYGTAVDLWSTGCILAELYAG 329
Y G D+WS G L + G
Sbjct: 189 KKEYDGKVADVWSCGVTLYVMLVG 212
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 101/207 (48%), Gaps = 9/207 (4%)
Query: 128 RADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKV-RFDNLEPESVRFMAREIHILRRL 186
+A+ +E + IG+G + V R +K+ A+K + +F+ ++ F E I+
Sbjct: 72 KAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFA 131
Query: 187 DHINVIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLD 245
+ V++L + LY+V EYM DL L S+ + E + Y +++ LD
Sbjct: 132 NSPWVVQL--FYAFQDDRYLYMVMEYMPGGDLVNLMSNYDV--PEKWARFYTAEVVLALD 187
Query: 246 HCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLL 305
HS G +HRD+K N+L+D +G LK+ADFG + + + V T Y PE+L
Sbjct: 188 AIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLK 247
Query: 306 ---GATYYGTAVDLWSTGCILAELYAG 329
G YYG D WS G L E+ G
Sbjct: 248 SQGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 107/219 (48%), Gaps = 40/219 (18%)
Query: 130 DSFEKLDKIGQGTYSNV-----------YRARDLDQKKIVALKKVRFDNLEPESVRFMAR 178
D FE++ +G G++ V Y + LD++K+V LK++
Sbjct: 27 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEH----------TLN 76
Query: 179 EIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGL--KFSEAQVKCY 236
E IL+ ++ ++KLE + + + +LY+V EY+ + SH +FSE + Y
Sbjct: 77 EKRILQAVNFPFLVKLE--FSFKDNSNLYMVMEYVPG--GEMFSHLRRIGRFSEPHARFY 132
Query: 237 MQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTL 296
Q++ ++ HS +++RD+K NLLID G +++ DFG A + + R TL
Sbjct: 133 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA--------KRVKGRTWTL 184
Query: 297 W----YRPPELLLGATYYGTAVDLWSTGCILAELYAGKP 331
Y PE++L Y AVD W+ G ++ E+ AG P
Sbjct: 185 CGTPEYLAPEIILSKG-YNKAVDWWALGVLIYEMAAGYP 222
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 135/301 (44%), Gaps = 41/301 (13%)
Query: 138 IGQGTYSNVYRARDLDQKKIVALKKV-RFDNLEPESVRFMAREIHILRRLDHINVIKLEG 196
+G+G ++ + D D K++ A K V + L+P M+ EI I R L H +V+ G
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 88
Query: 197 LVTSRMSCSLYLVFEYMEHDLAGLASHPGLK-FSEAQVKCYMQQLLCGLDHCHSRGVLHR 255
+ +++V E + L H K +E + + Y++Q++ G + H V+HR
Sbjct: 89 FFED--NDFVFVVLELCRRR-SLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHR 145
Query: 256 DIKGSNLLIDNNGILKIADFGLASF--YDPDQNQPLTSRVVTLWYRPPELLLGATYYGTA 313
D+K NL ++ + +KI DFGLA+ YD ++ + L T Y PE +L +
Sbjct: 146 DLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCG---TPNYIAPE-VLSKKGHSFE 201
Query: 314 VDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSKLPHATIFKPQQP 373
VD+WS GCI+ L GKP P T + E Y R K + +I K P
Sbjct: 202 VDVWSIGCIMYTLLVGKP--PFETSCLK------------ETYLRIKKNEY-SIPKHINP 246
Query: 374 YKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALRSEFFTMKPLPCD-PSSLPKYP 432
A +L++ +L DP R + L EFFT +P P + P
Sbjct: 247 V--------------AASLIQKMLQTDPTARPTINELLNDEFFTSGYIPARLPITCLTIP 292
Query: 433 P 433
P
Sbjct: 293 P 293
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 135/301 (44%), Gaps = 41/301 (13%)
Query: 138 IGQGTYSNVYRARDLDQKKIVALKKV-RFDNLEPESVRFMAREIHILRRLDHINVIKLEG 196
+G+G ++ + D D K++ A K V + L+P M+ EI I R L H +V+ G
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 197 LVTSRMSCSLYLVFEYMEHDLAGLASHPGLK-FSEAQVKCYMQQLLCGLDHCHSRGVLHR 255
+ +++V E + L H K +E + + Y++Q++ G + H V+HR
Sbjct: 85 FFED--NDFVFVVLELCRRR-SLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHR 141
Query: 256 DIKGSNLLIDNNGILKIADFGLASF--YDPDQNQPLTSRVVTLWYRPPELLLGATYYGTA 313
D+K NL ++ + +KI DFGLA+ YD ++ + L T Y PE +L +
Sbjct: 142 DLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCG---TPNYIAPE-VLSKKGHSFE 197
Query: 314 VDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSKLPHATIFKPQQP 373
VD+WS GCI+ L GKP P T + E Y R K ++ I K P
Sbjct: 198 VDVWSIGCIMYTLLVGKP--PFETSCLK------------ETYLRIKKNEYS-IPKHINP 242
Query: 374 YKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALRSEFFTMKPLPCD-PSSLPKYP 432
A +L++ +L DP R + L EFFT +P P + P
Sbjct: 243 V--------------AASLIQKMLQTDPTARPTINELLNDEFFTSGYIPARLPITCLTIP 288
Query: 433 P 433
P
Sbjct: 289 P 289
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 103/204 (50%), Gaps = 11/204 (5%)
Query: 129 ADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDH 188
+D ++ + IG G + RD K++VA+K + E+V+ REI R L H
Sbjct: 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQ---REIINHRSLRH 75
Query: 189 INVIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHC 247
N+++ + ++ + L ++ EY +L + G +FSE + + + QQLL G+ +C
Sbjct: 76 PNIVRFKEVILT--PTHLAIIMEYASGGELYERICNAG-RFSEDEARFFFQQLLSGVSYC 132
Query: 248 HSRGVLHRDIKGSNLLIDNNGI--LKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLL 305
HS + HRD+K N L+D + LKI DFG + +QP S V T Y PE+LL
Sbjct: 133 HSMQICHRDLKLENTLLDGSPAPRLKICDFGYSK-SSVLHSQP-KSTVGTPAYIAPEVLL 190
Query: 306 GATYYGTAVDLWSTGCILAELYAG 329
Y G D+WS G L + G
Sbjct: 191 RQEYDGKIADVWSCGVTLYVMLVG 214
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 135/301 (44%), Gaps = 41/301 (13%)
Query: 138 IGQGTYSNVYRARDLDQKKIVALKKV-RFDNLEPESVRFMAREIHILRRLDHINVIKLEG 196
+G+G ++ + D D K++ A K V + L+P M+ EI I R L H +V+ G
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 197 LVTSRMSCSLYLVFEYMEHDLAGLASHPGLK-FSEAQVKCYMQQLLCGLDHCHSRGVLHR 255
+ +++V E + L H K +E + + Y++Q++ G + H V+HR
Sbjct: 85 FFED--NDFVFVVLELCRRR-SLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHR 141
Query: 256 DIKGSNLLIDNNGILKIADFGLASF--YDPDQNQPLTSRVVTLWYRPPELLLGATYYGTA 313
D+K NL ++ + +KI DFGLA+ YD ++ + L T Y PE +L +
Sbjct: 142 DLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCG---TPNYIAPE-VLSKKGHSFE 197
Query: 314 VDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSKLPHATIFKPQQP 373
VD+WS GCI+ L GKP P T + E Y R K ++ I K P
Sbjct: 198 VDVWSIGCIMYTLLVGKP--PFETSCLK------------ETYLRIKKNEYS-IPKHINP 242
Query: 374 YKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALRSEFFTMKPLPCD-PSSLPKYP 432
A +L++ +L DP R + L EFFT +P P + P
Sbjct: 243 V--------------AASLIQKMLQTDPTARPTINELLNDEFFTSGYIPARLPITCLTIP 288
Query: 433 P 433
P
Sbjct: 289 P 289
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 106/221 (47%), Gaps = 44/221 (19%)
Query: 130 DSFEKLDKIGQGTYSNV-----------YRARDLDQKKIVALKKVRFDNLEPESVRFMAR 178
D FE++ +G G++ V Y + LD++K+V LK++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEH----------TLN 90
Query: 179 EIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLK----FSEAQVK 234
E IL+ ++ ++KLE + + + +LY+V EY+ AG L+ FSE +
Sbjct: 91 EKRILQAVNFPFLVKLE--FSFKDNSNLYMVMEYV----AGGEMFSHLRRIGRFSEPHAR 144
Query: 235 CYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVV 294
Y Q++ ++ HS +++RD+K NLLID G +++ DFG A + + R
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA--------KRVKGRTW 196
Query: 295 TLW----YRPPELLLGATYYGTAVDLWSTGCILAELYAGKP 331
L Y PE++L Y AVD W+ G ++ E+ AG P
Sbjct: 197 XLCGTPEYLAPEIILSKG-YNKAVDWWALGVLIYEMAAGYP 236
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 135/301 (44%), Gaps = 41/301 (13%)
Query: 138 IGQGTYSNVYRARDLDQKKIVALKKV-RFDNLEPESVRFMAREIHILRRLDHINVIKLEG 196
+G+G ++ + D D K++ A K V + L+P M+ EI I R L H +V+ G
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 108
Query: 197 LVTSRMSCSLYLVFEYMEHDLAGLASHPGLK-FSEAQVKCYMQQLLCGLDHCHSRGVLHR 255
+ +++V E + L H K +E + + Y++Q++ G + H V+HR
Sbjct: 109 FFED--NDFVFVVLELCRRR-SLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHR 165
Query: 256 DIKGSNLLIDNNGILKIADFGLASF--YDPDQNQPLTSRVVTLWYRPPELLLGATYYGTA 313
D+K NL ++ + +KI DFGLA+ YD ++ + L T Y PE +L +
Sbjct: 166 DLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCG---TPNYIAPE-VLSKKGHSFE 221
Query: 314 VDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSKLPHATIFKPQQP 373
VD+WS GCI+ L GKP P T + E Y R K + +I K P
Sbjct: 222 VDVWSIGCIMYTLLVGKP--PFETSCLK------------ETYLRIKKNEY-SIPKHINP 266
Query: 374 YKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALRSEFFTMKPLPCD-PSSLPKYP 432
A +L++ +L DP R + L EFFT +P P + P
Sbjct: 267 V--------------AASLIQKMLQTDPTARPTINELLNDEFFTSGYIPARLPITCLTIP 312
Query: 433 P 433
P
Sbjct: 313 P 313
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 135/301 (44%), Gaps = 41/301 (13%)
Query: 138 IGQGTYSNVYRARDLDQKKIVALKKV-RFDNLEPESVRFMAREIHILRRLDHINVIKLEG 196
+G+G ++ + D D K++ A K V + L+P M+ EI I R L H +V+ G
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 106
Query: 197 LVTSRMSCSLYLVFEYMEHDLAGLASHPGLK-FSEAQVKCYMQQLLCGLDHCHSRGVLHR 255
+ +++V E + L H K +E + + Y++Q++ G + H V+HR
Sbjct: 107 FFED--NDFVFVVLELCRRR-SLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHR 163
Query: 256 DIKGSNLLIDNNGILKIADFGLASF--YDPDQNQPLTSRVVTLWYRPPELLLGATYYGTA 313
D+K NL ++ + +KI DFGLA+ YD ++ + L T Y PE +L +
Sbjct: 164 DLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCG---TPNYIAPE-VLSKKGHSFE 219
Query: 314 VDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSKLPHATIFKPQQP 373
VD+WS GCI+ L GKP P T + E Y R K + +I K P
Sbjct: 220 VDVWSIGCIMYTLLVGKP--PFETSCLK------------ETYLRIKKNEY-SIPKHINP 264
Query: 374 YKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALRSEFFTMKPLPCD-PSSLPKYP 432
A +L++ +L DP R + L EFFT +P P + P
Sbjct: 265 V--------------AASLIQKMLQTDPTARPTINELLNDEFFTSGYIPARLPITCLTIP 310
Query: 433 P 433
P
Sbjct: 311 P 311
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 106/219 (48%), Gaps = 40/219 (18%)
Query: 130 DSFEKLDKIGQGTYSNV-----------YRARDLDQKKIVALKKVRFDNLEPESVRFMAR 178
D FE++ +G G++ V Y + LD++K+V LK++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEH----------TLN 90
Query: 179 EIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGL--KFSEAQVKCY 236
E IL+ ++ ++KLE + + + +LY+V EY + SH +FSE + Y
Sbjct: 91 EKRILQAVNFPFLVKLE--FSFKDNSNLYMVMEYAPG--GEMFSHLRRIGRFSEPHARFY 146
Query: 237 MQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTL 296
Q++ ++ HS +++RD+K NL+ID G +K+ DFGLA + + R L
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGLA--------KRVKGRTWXL 198
Query: 297 W----YRPPELLLGATYYGTAVDLWSTGCILAELYAGKP 331
Y PE++L Y AVD W+ G ++ E+ AG P
Sbjct: 199 CGTPEYLAPEIILSKG-YNKAVDWWALGVLIYEMAAGYP 236
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 133/287 (46%), Gaps = 37/287 (12%)
Query: 132 FEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINV 191
+ KIG+G+ V A K+VA+KK+ + + F E+ I+R H NV
Sbjct: 33 LDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF--NEVVIMRDYQHENV 90
Query: 192 IKLEGLVTSRMSCSLYLVFEYMEHD-LAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSR 250
+++ + + L++V E++E L + +H + +E Q+ +L L H++
Sbjct: 91 VEMYN--SYLVGDELWVVMEFLEGGALTDIVTHT--RMNEEQIAAVCLAVLQALSVLHAQ 146
Query: 251 GVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVV-TLWYRPPELLLGATY 309
GV+HRDIK ++L+ ++G +K++DFG + + P +V T ++ PE L+
Sbjct: 147 GVIHRDIKSDSILLTHDGRVKLSDFGFCA--QVSKEVPRRKXLVGTPYWMAPE-LISRLP 203
Query: 310 YGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSKLPHATIFK 369
YG VD+WS G ++ E+ G+P ++ + I + LP
Sbjct: 204 YGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI-------------RDNLP------ 244
Query: 370 PQQPYKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALRSEFF 416
P+ V+ + K F ++ LL DPA R +AA L+ F
Sbjct: 245 PRLKNLHKVSPSLKGF-------LDRLLVRDPAQRATAAELLKHPFL 284
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 135/301 (44%), Gaps = 41/301 (13%)
Query: 138 IGQGTYSNVYRARDLDQKKIVALKKV-RFDNLEPESVRFMAREIHILRRLDHINVIKLEG 196
+G+G ++ + D D K++ A K V + L+P M+ EI I R L H +V+ G
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 82
Query: 197 LVTSRMSCSLYLVFEYMEHDLAGLASHPGLK-FSEAQVKCYMQQLLCGLDHCHSRGVLHR 255
+ +++V E + L H K +E + + Y++Q++ G + H V+HR
Sbjct: 83 FFED--NDFVFVVLELCRRR-SLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHR 139
Query: 256 DIKGSNLLIDNNGILKIADFGLASF--YDPDQNQPLTSRVVTLWYRPPELLLGATYYGTA 313
D+K NL ++ + +KI DFGLA+ YD ++ + L T Y PE +L +
Sbjct: 140 DLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCG---TPNYIAPE-VLSKKGHSFE 195
Query: 314 VDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSKLPHATIFKPQQP 373
VD+WS GCI+ L GKP P T + E Y R K + +I K P
Sbjct: 196 VDVWSIGCIMYTLLVGKP--PFETSCLK------------ETYLRIKKNEY-SIPKHINP 240
Query: 374 YKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALRSEFFTMKPLPCD-PSSLPKYP 432
A +L++ +L DP R + L EFFT +P P + P
Sbjct: 241 V--------------AASLIQKMLQTDPTARPTINELLNDEFFTSGYIPARLPITCLTIP 286
Query: 433 P 433
P
Sbjct: 287 P 287
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 110/228 (48%), Gaps = 15/228 (6%)
Query: 128 RADSFEKLDKIGQGTYSNVYRARDL---DQKKIVALKKVRFDNL--EPESVRFMAREIHI 182
R + FE L +G+G Y V++ R + + KI A+K ++ + + E +I
Sbjct: 15 RPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNI 74
Query: 183 LRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLL 241
L + H ++ L + + LYL+ EY+ +L G+ F E Y+ ++
Sbjct: 75 LEEVKHPFIVDL--IYAFQTGGKLYLILEYLSGGELFMQLEREGI-FMEDTACFYLAEIS 131
Query: 242 CGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLA--SFYDPDQNQPLTSRVVTLWYR 299
L H H +G+++RD+K N+++++ G +K+ DFGL S +D T+ Y
Sbjct: 132 MALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCG---TIEYM 188
Query: 300 PPELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFK 347
PE+L+ + + AVD WS G ++ ++ G P G + + KI K
Sbjct: 189 APEILMRSG-HNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILK 235
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 133/287 (46%), Gaps = 37/287 (12%)
Query: 132 FEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINV 191
+ KIG+G+ V A K+VA+KK+ + + F E+ I+R H NV
Sbjct: 31 LDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF--NEVVIMRDYQHENV 88
Query: 192 IKLEGLVTSRMSCSLYLVFEYMEHD-LAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSR 250
+++ + + L++V E++E L + +H + +E Q+ +L L H++
Sbjct: 89 VEMYN--SYLVGDELWVVMEFLEGGALTDIVTHT--RMNEEQIAAVCLAVLQALSVLHAQ 144
Query: 251 GVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVV-TLWYRPPELLLGATY 309
GV+HRDIK ++L+ ++G +K++DFG + + P +V T ++ PE L+
Sbjct: 145 GVIHRDIKSDSILLTHDGRVKLSDFGFCA--QVSKEVPRRKXLVGTPYWMAPE-LISRLP 201
Query: 310 YGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSKLPHATIFK 369
YG VD+WS G ++ E+ G+P ++ + I + LP
Sbjct: 202 YGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI-------------RDNLP------ 242
Query: 370 PQQPYKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALRSEFF 416
P+ V+ + K F ++ LL DPA R +AA L+ F
Sbjct: 243 PRLKNLHKVSPSLKGF-------LDRLLVRDPAQRATAAELLKHPFL 282
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 106/221 (47%), Gaps = 44/221 (19%)
Query: 130 DSFEKLDKIGQGTYSNV-----------YRARDLDQKKIVALKKVRFDNLEPESVRFMAR 178
D F+++ +G G++ V Y + LD++K+V LK++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEH----------TLN 90
Query: 179 EIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLK----FSEAQVK 234
E IL+ ++ ++KLE + + + +LY+V EY+ AG L+ FSE +
Sbjct: 91 EKRILQAVNFPFLVKLE--FSFKDNSNLYMVMEYV----AGGEMFSHLRRIGRFSEPHAR 144
Query: 235 CYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVV 294
Y Q++ ++ HS +++RD+K NLLID G +++ DFG A + + R
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA--------KRVKGRTW 196
Query: 295 TLW----YRPPELLLGATYYGTAVDLWSTGCILAELYAGKP 331
L Y PE++L Y AVD W+ G ++ E+ AG P
Sbjct: 197 XLXGTPEYLAPEIILSKG-YNKAVDWWALGVLIYEMAAGYP 236
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 110/228 (48%), Gaps = 15/228 (6%)
Query: 128 RADSFEKLDKIGQGTYSNVYRARDL---DQKKIVALKKVRFDNL--EPESVRFMAREIHI 182
R + FE L +G+G Y V++ R + + KI A+K ++ + + E +I
Sbjct: 15 RPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNI 74
Query: 183 LRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLL 241
L + H ++ L + + LYL+ EY+ +L G+ F E Y+ ++
Sbjct: 75 LEEVKHPFIVDL--IYAFQTGGKLYLILEYLSGGELFMQLEREGI-FMEDTACFYLAEIS 131
Query: 242 CGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLA--SFYDPDQNQPLTSRVVTLWYR 299
L H H +G+++RD+K N+++++ G +K+ DFGL S +D T+ Y
Sbjct: 132 MALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHXFCG---TIEYM 188
Query: 300 PPELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFK 347
PE+L+ + + AVD WS G ++ ++ G P G + + KI K
Sbjct: 189 APEILMRSG-HNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILK 235
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 109/232 (46%), Gaps = 11/232 (4%)
Query: 130 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHI 189
D ++ D +G G +S V A D +K+VA+K + + LE + M EI +L ++ H
Sbjct: 18 DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGS-MENEIAVLHKIKHP 76
Query: 190 NVIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCH 248
N++ L+ + S LYL+ + + +L G ++E + Q+L + + H
Sbjct: 77 NIVALDDIYES--GGHLYLIMQLVSGGELFDRIVEKGF-YTERDASRLIFQVLDAVKYLH 133
Query: 249 SRGVLHRDIKGSNLL---IDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLL 305
G++HRD+K NLL +D + + I+DFGL+ DP L++ T Y PE +L
Sbjct: 134 DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDP--GSVLSTACGTPGYVAPE-VL 190
Query: 306 GATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYW 357
Y AVD WS G I L G P + + +I K YW
Sbjct: 191 AQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYW 242
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 108/232 (46%), Gaps = 11/232 (4%)
Query: 130 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHI 189
D ++ D +G G +S V A D +K+VA+K + LE + M EI +L ++ H
Sbjct: 18 DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGS-MENEIAVLHKIKHP 76
Query: 190 NVIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCH 248
N++ L+ + S LYL+ + + +L G ++E + Q+L + + H
Sbjct: 77 NIVALDDIYES--GGHLYLIMQLVSGGELFDRIVEKGF-YTERDASRLIFQVLDAVKYLH 133
Query: 249 SRGVLHRDIKGSNLL---IDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLL 305
G++HRD+K NLL +D + + I+DFGL+ DP L++ T Y PE +L
Sbjct: 134 DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDP--GSVLSTACGTPGYVAPE-VL 190
Query: 306 GATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYW 357
Y AVD WS G I L G P + + +I K YW
Sbjct: 191 AQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYW 242
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 106/212 (50%), Gaps = 18/212 (8%)
Query: 130 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKV---RFDNLEPESVRFMAREIHILRRL 186
D +E + IG+G +S V R + + + A+K V +F + S + RE I L
Sbjct: 24 DVYELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML 83
Query: 187 DHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLA------SHPGLKFSEAQVKCYMQQL 240
H ++++L L T LY+VFE+M D A L + G +SEA YM+Q+
Sbjct: 84 KHPHIVEL--LETYSSDGMLYMVFEFM--DGADLCFEIVKRADAGFVYSEAVASHYMRQI 139
Query: 241 LCGLDHCHSRGVLHRDIKGSNLLI---DNNGILKIADFGLASFYDPDQNQPLTSRVVTLW 297
L L +CH ++HRD+K N+L+ +N+ +K+ DFG+A + RV T
Sbjct: 140 LEALRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVA-IQLGESGLVAGGRVGTPH 198
Query: 298 YRPPELLLGATYYGTAVDLWSTGCILAELYAG 329
+ PE++ YG VD+W G IL L +G
Sbjct: 199 FMAPEVVKREP-YGKPVDVWGCGVILFILLSG 229
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 106/221 (47%), Gaps = 44/221 (19%)
Query: 130 DSFEKLDKIGQGTYSNV-----------YRARDLDQKKIVALKKVRFDNLEPESVRFMAR 178
D F+++ +G G++ V Y + LD++K+V LK++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEH----------TLN 90
Query: 179 EIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLK----FSEAQVK 234
E IL+ ++ ++KLE + + + +LY+V EY+ AG L+ FSE +
Sbjct: 91 EKRILQAVNFPFLVKLE--FSFKDNSNLYMVMEYV----AGGEMFSHLRRIGRFSEPHAR 144
Query: 235 CYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVV 294
Y Q++ ++ HS +++RD+K NLLID G +++ DFG A + + R
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA--------KRVKGRTW 196
Query: 295 TLW----YRPPELLLGATYYGTAVDLWSTGCILAELYAGKP 331
L Y PE++L Y AVD W+ G ++ E+ AG P
Sbjct: 197 XLAGTPEYLAPEIILSKG-YNKAVDWWALGVLIYEMAAGYP 236
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 101/204 (49%), Gaps = 11/204 (5%)
Query: 129 ADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDH 188
+D +E + IG G + RD ++VA+K + +V+ REI R L H
Sbjct: 18 SDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIAANVK---REIINHRSLRH 74
Query: 189 INVIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHC 247
N+++ + ++ + L +V EY +L + G +FSE + + + QQL+ G+ +C
Sbjct: 75 PNIVRFKEVILT--PTHLAIVMEYASGGELFERICNAG-RFSEDEARFFFQQLISGVSYC 131
Query: 248 HSRGVLHRDIKGSNLLIDNNGI--LKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLL 305
H+ V HRD+K N L+D + LKI DFG + +QP S V T Y PE+LL
Sbjct: 132 HAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSK-SSVLHSQP-KSTVGTPAYIAPEVLL 189
Query: 306 GATYYGTAVDLWSTGCILAELYAG 329
Y G D+WS G L + G
Sbjct: 190 KKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 106/221 (47%), Gaps = 44/221 (19%)
Query: 130 DSFEKLDKIGQGTYSNV-----------YRARDLDQKKIVALKKVRFDNLEPESVRFMAR 178
D F+++ +G G++ V Y + LD++K+V LK++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEH----------TLN 90
Query: 179 EIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLK----FSEAQVK 234
E IL+ ++ ++KLE + + + +LY+V EY+ AG L+ FSE +
Sbjct: 91 EKRILQAVNFPFLVKLE--FSFKDNSNLYMVMEYV----AGGEMFSHLRRIGRFSEPHAR 144
Query: 235 CYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVV 294
Y Q++ ++ HS +++RD+K NLLID G +++ DFG A + + R
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA--------KRVKGRTW 196
Query: 295 TLW----YRPPELLLGATYYGTAVDLWSTGCILAELYAGKP 331
L Y PE++L Y AVD W+ G ++ E+ AG P
Sbjct: 197 XLCGTPEYLAPEIILSKG-YNKAVDWWALGVLIYEMAAGYP 236
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 109/232 (46%), Gaps = 11/232 (4%)
Query: 130 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHI 189
D ++ D +G G +S V A D +K+VA+K + + LE + M EI +L ++ H
Sbjct: 18 DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGS-MENEIAVLHKIKHP 76
Query: 190 NVIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCH 248
N++ L+ + S LYL+ + + +L G ++E + Q+L + + H
Sbjct: 77 NIVALDDIYES--GGHLYLIMQLVSGGELFDRIVEKGF-YTERDASRLIFQVLDAVKYLH 133
Query: 249 SRGVLHRDIKGSNLL---IDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLL 305
G++HRD+K NLL +D + + I+DFGL+ DP L++ T Y PE +L
Sbjct: 134 DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDP--GSVLSTACGTPGYVAPE-VL 190
Query: 306 GATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYW 357
Y AVD WS G I L G P + + +I K YW
Sbjct: 191 AQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYW 242
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 106/219 (48%), Gaps = 40/219 (18%)
Query: 130 DSFEKLDKIGQGTYSNV-----------YRARDLDQKKIVALKKVRFDNLEPESVRFMAR 178
D FE++ +G G++ V Y + LD++K+V LK++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEH----------TLN 91
Query: 179 EIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGL--KFSEAQVKCY 236
E IL+ ++ ++KLE + + + +LY+V EY+ + SH +FSE + Y
Sbjct: 92 EKRILQAVNFPFLVKLE--FSFKDNSNLYMVMEYVPG--GEMFSHLRRIGRFSEPHARFY 147
Query: 237 MQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTL 296
Q++ ++ HS +++RD+K NLLID G +++ DFG A + + R L
Sbjct: 148 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA--------KRVKGRTWXL 199
Query: 297 W----YRPPELLLGATYYGTAVDLWSTGCILAELYAGKP 331
Y PE++L Y AVD W+ G ++ E+ AG P
Sbjct: 200 CGTPEYLAPEIILSKG-YNKAVDWWALGVLIYEMAAGYP 237
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 106/219 (48%), Gaps = 40/219 (18%)
Query: 130 DSFEKLDKIGQGTYSNV-----------YRARDLDQKKIVALKKVRFDNLEPESVRFMAR 178
D FE++ +G G++ V Y + LD++K+V LK++
Sbjct: 62 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEH----------TLN 111
Query: 179 EIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGL--KFSEAQVKCY 236
E IL+ ++ ++KLE + + + +LY+V EY+ + SH +FSE + Y
Sbjct: 112 EKRILQAVNFPFLVKLE--FSFKDNSNLYMVMEYVPG--GEMFSHLRRIGRFSEPHARFY 167
Query: 237 MQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTL 296
Q++ ++ HS +++RD+K NLLID G +++ DFG A + + R L
Sbjct: 168 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA--------KRVKGRTWXL 219
Query: 297 W----YRPPELLLGATYYGTAVDLWSTGCILAELYAGKP 331
Y PE++L Y AVD W+ G ++ E+ AG P
Sbjct: 220 CGTPEYLAPEIILSKG-YNKAVDWWALGVLIYEMAAGYP 257
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 106/219 (48%), Gaps = 40/219 (18%)
Query: 130 DSFEKLDKIGQGTYSNV-----------YRARDLDQKKIVALKKVRFDNLEPESVRFMAR 178
D FE++ +G G++ V Y + LD++K+V LK++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEH----------TLN 91
Query: 179 EIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGL--KFSEAQVKCY 236
E IL+ ++ ++KLE + + + +LY+V EY+ + SH +FSE + Y
Sbjct: 92 EKRILQAVNFPFLVKLE--FSFKDNSNLYMVMEYVPG--GEMFSHLRRIGRFSEPHARFY 147
Query: 237 MQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTL 296
Q++ ++ HS +++RD+K NLLID G +++ DFG A + + R L
Sbjct: 148 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA--------KRVKGRTWXL 199
Query: 297 W----YRPPELLLGATYYGTAVDLWSTGCILAELYAGKP 331
Y PE++L Y AVD W+ G ++ E+ AG P
Sbjct: 200 CGTPEYLAPEIILSKG-YNKAVDWWALGVLIYEMAAGYP 237
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 106/219 (48%), Gaps = 40/219 (18%)
Query: 130 DSFEKLDKIGQGTYSNV-----------YRARDLDQKKIVALKKVRFDNLEPESVRFMAR 178
D FE++ +G G++ V Y + LD++K+V LK++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEH----------TLN 91
Query: 179 EIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGL--KFSEAQVKCY 236
E IL+ ++ ++KLE + + + +LY+V EY+ + SH +FSE + Y
Sbjct: 92 EKRILQAVNFPFLVKLE--FSFKDNSNLYMVMEYVPG--GEMFSHLRRIGRFSEPHARFY 147
Query: 237 MQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTL 296
Q++ ++ HS +++RD+K NLLID G +++ DFG A + + R L
Sbjct: 148 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA--------KRVKGRTWXL 199
Query: 297 W----YRPPELLLGATYYGTAVDLWSTGCILAELYAGKP 331
Y PE++L Y AVD W+ G ++ E+ AG P
Sbjct: 200 CGTPEYLAPEIILSKG-YNKAVDWWALGVLIYEMAAGYP 237
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 106/219 (48%), Gaps = 40/219 (18%)
Query: 130 DSFEKLDKIGQGTYSNV-----------YRARDLDQKKIVALKKVRFDNLEPESVRFMAR 178
D FE++ +G G++ V Y + LD++K+V LK++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEH----------TLN 90
Query: 179 EIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGL--KFSEAQVKCY 236
E IL+ ++ ++KLE + + + +LY+V EY+ + SH +FSE + Y
Sbjct: 91 EKRILQAVNFPFLVKLE--FSFKDNSNLYMVMEYVPG--GEMFSHLRRIGRFSEPHARFY 146
Query: 237 MQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTL 296
Q++ ++ HS +++RD+K NLLID G +++ DFG A + + R L
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA--------KRVKGRTWXL 198
Query: 297 W----YRPPELLLGATYYGTAVDLWSTGCILAELYAGKP 331
Y PE++L Y AVD W+ G ++ E+ AG P
Sbjct: 199 CGTPEYLAPEIILSKG-YNKAVDWWALGVLIYEMAAGYP 236
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 106/219 (48%), Gaps = 40/219 (18%)
Query: 130 DSFEKLDKIGQGTYSNV-----------YRARDLDQKKIVALKKVRFDNLEPESVRFMAR 178
D FE++ +G G++ V Y + LD++K+V LK++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEH----------TLN 90
Query: 179 EIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGL--KFSEAQVKCY 236
E IL+ ++ ++KLE + + + +LY+V EY+ + SH +FSE + Y
Sbjct: 91 EKRILQAVNFPFLVKLE--FSFKDNSNLYMVMEYVPG--GEMFSHLRRIGRFSEPHARFY 146
Query: 237 MQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTL 296
Q++ ++ HS +++RD+K NLLID G +++ DFG A + + R L
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA--------KRVKGRTWXL 198
Query: 297 W----YRPPELLLGATYYGTAVDLWSTGCILAELYAGKP 331
Y PE++L Y AVD W+ G ++ E+ AG P
Sbjct: 199 CGTPEYLAPEIILSKG-YNKAVDWWALGVLIYEMAAGYP 236
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 106/219 (48%), Gaps = 40/219 (18%)
Query: 130 DSFEKLDKIGQGTYSNV-----------YRARDLDQKKIVALKKVRFDNLEPESVRFMAR 178
D FE++ +G G++ V Y + LD++K+V LK++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEH----------TLN 91
Query: 179 EIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGL--KFSEAQVKCY 236
E IL+ ++ ++KLE + + + +LY+V EY+ + SH +FSE + Y
Sbjct: 92 EKRILQAVNFPFLVKLE--FSFKDNSNLYMVMEYVPG--GEMFSHLRRIGRFSEPHARFY 147
Query: 237 MQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTL 296
Q++ ++ HS +++RD+K NLLID G +++ DFG A + + R L
Sbjct: 148 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA--------KRVKGRTWXL 199
Query: 297 W----YRPPELLLGATYYGTAVDLWSTGCILAELYAGKP 331
Y PE++L Y AVD W+ G ++ E+ AG P
Sbjct: 200 CGTPEYLAPEIILSKG-YNKAVDWWALGVLIYEMAAGYP 237
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 102/204 (50%), Gaps = 11/204 (5%)
Query: 129 ADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDH 188
+D +E + IG G + RD ++VA+K + E+V+ REI R L H
Sbjct: 18 SDRYELVKDIGAGNFGVARLMRDKQANELVAVKYIERGEKIDENVK---REIINHRSLRH 74
Query: 189 INVIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHC 247
N+++ + ++ + L +V EY +L + G +FSE + + + QQL+ G+ +
Sbjct: 75 PNIVRFKEVILT--PTHLAIVMEYASGGELFERICNAG-RFSEDEARFFFQQLISGVSYA 131
Query: 248 HSRGVLHRDIKGSNLLIDNNGI--LKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLL 305
H+ V HRD+K N L+D + LKIADFG + +QP S V T Y PE+LL
Sbjct: 132 HAMQVAHRDLKLENTLLDGSPAPRLKIADFGYSK-ASVLHSQP-KSAVGTPAYIAPEVLL 189
Query: 306 GATYYGTAVDLWSTGCILAELYAG 329
Y G D+WS G L + G
Sbjct: 190 KKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 114/228 (50%), Gaps = 6/228 (2%)
Query: 120 AIQGWVPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNL-EPESVRFMAR 178
++ + + + F+ + +G+G+++ VYRA + VA+K + + + V+ +
Sbjct: 1 SLATCIGEKIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQN 60
Query: 179 EIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLK-FSEAQVKCYM 237
E+ I +L H ++++L S +YLV E + +K FSE + + +M
Sbjct: 61 EVKIHCQLKHPSILELYNYFED--SNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFM 118
Query: 238 QQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLW 297
Q++ G+ + HS G+LHRD+ SNLL+ N +KIADFGLA+ + T T
Sbjct: 119 HQIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT-LCGTPN 177
Query: 298 YRPPELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKI 345
Y PE+ + +G D+WS GC+ L G+P T L+K+
Sbjct: 178 YISPEIATRSA-HGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKV 224
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 133/287 (46%), Gaps = 37/287 (12%)
Query: 132 FEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINV 191
+ KIG+G+ V A K+VA+KK+ + + F E+ I+R H NV
Sbjct: 26 LDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF--NEVVIMRDYQHENV 83
Query: 192 IKLEGLVTSRMSCSLYLVFEYMEHD-LAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSR 250
+++ + + L++V E++E L + +H + +E Q+ +L L H++
Sbjct: 84 VEMYN--SYLVGDELWVVMEFLEGGALTDIVTHT--RMNEEQIAAVCLAVLQALSVLHAQ 139
Query: 251 GVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVV-TLWYRPPELLLGATY 309
GV+HRDIK ++L+ ++G +K++DFG + + P +V T ++ PE L+
Sbjct: 140 GVIHRDIKSDSILLTHDGRVKLSDFGFCA--QVSKEVPRRKXLVGTPYWMAPE-LISRLP 196
Query: 310 YGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSKLPHATIFK 369
YG VD+WS G ++ E+ G+P ++ + I + LP
Sbjct: 197 YGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI-------------RDNLP------ 237
Query: 370 PQQPYKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALRSEFF 416
P+ V+ + K F ++ LL DPA R +AA L+ F
Sbjct: 238 PRLKNLHKVSPSLKGF-------LDRLLVRDPAQRATAAELLKHPFL 277
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 105/222 (47%), Gaps = 46/222 (20%)
Query: 130 DSFEKLDKIGQGTYSNV-----------YRARDLDQKKIVALKKVRFDNLEPESVRFMAR 178
D FE++ +G G++ V Y + LD++K+V LK++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEH----------TLN 91
Query: 179 EIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEY-----MEHDLAGLASHPGLKFSEAQV 233
E IL+ ++ ++KLE + + + +LY+V EY M L + +FSE
Sbjct: 92 EKRILQAVNFPFLVKLE--FSFKDNSNLYMVMEYAPGGEMFSHLRRIG-----RFSEPHA 144
Query: 234 KCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRV 293
+ Y Q++ ++ HS +++RD+K NL+ID G +K+ DFG A + + R
Sbjct: 145 RFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFA--------KRVKGRT 196
Query: 294 VTLW----YRPPELLLGATYYGTAVDLWSTGCILAELYAGKP 331
L Y PE++L Y AVD W+ G ++ E+ AG P
Sbjct: 197 WXLCGTPEYLAPEIILSKG-YNKAVDWWALGVLIYEMAAGYP 237
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 106/219 (48%), Gaps = 40/219 (18%)
Query: 130 DSFEKLDKIGQGTYSNV-----------YRARDLDQKKIVALKKVRFDNLEPESVRFMAR 178
D FE++ +G G++ V Y + LD++K+V LK++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEH----------TLN 90
Query: 179 EIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGL--KFSEAQVKCY 236
E IL+ ++ ++KLE + + + +LY+V EY+ + SH +FSE + Y
Sbjct: 91 EKRILQAVNFPFLVKLE--FSFKDNSNLYMVMEYVPG--GEMFSHLRRIGRFSEPHARFY 146
Query: 237 MQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTL 296
Q++ ++ HS +++RD+K NLLID G +++ DFG A + + R L
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA--------KRVKGRTWXL 198
Query: 297 W----YRPPELLLGATYYGTAVDLWSTGCILAELYAGKP 331
Y PE++L Y AVD W+ G ++ E+ AG P
Sbjct: 199 CGTPEYLAPEIILSKG-YNKAVDWWALGVLIYEMAAGYP 236
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 105/222 (47%), Gaps = 46/222 (20%)
Query: 130 DSFEKLDKIGQGTYSNV-----------YRARDLDQKKIVALKKVRFDNLEPESVRFMAR 178
D FE++ +G G++ V Y + LD++K+V LK++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEH----------TLN 90
Query: 179 EIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEY-----MEHDLAGLASHPGLKFSEAQV 233
E IL+ ++ ++KLE + + + +LY+V EY M L + +FSE
Sbjct: 91 EKRILQAVNFPFLVKLE--FSFKDNSNLYMVMEYAPGGEMFSHLRRIG-----RFSEPHA 143
Query: 234 KCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRV 293
+ Y Q++ ++ HS +++RD+K NL+ID G +K+ DFG A + + R
Sbjct: 144 RFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFA--------KRVKGRT 195
Query: 294 VTLW----YRPPELLLGATYYGTAVDLWSTGCILAELYAGKP 331
L Y PE++L Y AVD W+ G ++ E+ AG P
Sbjct: 196 WXLCGTPEYLAPEIILSKG-YNKAVDWWALGVLIYEMAAGYP 236
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 106/221 (47%), Gaps = 44/221 (19%)
Query: 130 DSFEKLDKIGQGTYSNV-----------YRARDLDQKKIVALKKVRFDNLEPESVRFMAR 178
D F+++ +G G++ V Y + LD++K+V LK++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEH----------TLN 90
Query: 179 EIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLK----FSEAQVK 234
E IL+ ++ ++KLE + + + +LY+V EY+ AG L+ FSE +
Sbjct: 91 EKRILQAVNFPFLVKLE--FSFKDNSNLYMVMEYV----AGGEMFSHLRRIGRFSEPHAR 144
Query: 235 CYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVV 294
Y Q++ ++ HS +++RD+K NLLID G +++ DFG A + + R
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA--------KRVKGRTW 196
Query: 295 TLW----YRPPELLLGATYYGTAVDLWSTGCILAELYAGKP 331
L Y PE++L Y AVD W+ G ++ E+ AG P
Sbjct: 197 XLCGTPEYLAPEIILSKG-YNKAVDWWALGVLIYEMAAGYP 236
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 106/221 (47%), Gaps = 44/221 (19%)
Query: 130 DSFEKLDKIGQGTYSNV-----------YRARDLDQKKIVALKKVRFDNLEPESVRFMAR 178
D F+++ +G G++ V Y + LD++K+V LK++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEH----------TLN 90
Query: 179 EIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLK----FSEAQVK 234
E IL+ ++ ++KLE + + + +LY+V EY+ AG L+ FSE +
Sbjct: 91 EKRILQAVNFPFLVKLE--FSFKDNSNLYMVMEYV----AGGEMFSHLRRIGRFSEPHAR 144
Query: 235 CYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVV 294
Y Q++ ++ HS +++RD+K NLLID G +++ DFG A + + R
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA--------KRVKGRTW 196
Query: 295 TLW----YRPPELLLGATYYGTAVDLWSTGCILAELYAGKP 331
L Y PE++L Y AVD W+ G ++ E+ AG P
Sbjct: 197 XLCGTPEYLAPEIILSKG-YNKAVDWWALGVLIYEMAAGYP 236
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 106/221 (47%), Gaps = 44/221 (19%)
Query: 130 DSFEKLDKIGQGTYSNV-----------YRARDLDQKKIVALKKVRFDNLEPESVRFMAR 178
D F+++ +G G++ V Y + LD++K+V LK++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEH----------TLN 90
Query: 179 EIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLK----FSEAQVK 234
E IL+ ++ ++KLE + + + +LY+V EY+ AG L+ FSE +
Sbjct: 91 EKRILQAVNFPFLVKLE--FSFKDNSNLYMVMEYV----AGGEMFSHLRRIGRFSEPHAR 144
Query: 235 CYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVV 294
Y Q++ ++ HS +++RD+K NLLID G +++ DFG A + + R
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA--------KRVKGRTW 196
Query: 295 TLW----YRPPELLLGATYYGTAVDLWSTGCILAELYAGKP 331
L Y PE++L Y AVD W+ G ++ E+ AG P
Sbjct: 197 XLCGTPEYLAPEIILSKG-YNKAVDWWALGVLIYEMAAGYP 236
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 98/215 (45%), Gaps = 17/215 (7%)
Query: 129 ADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDH 188
A FE ++ +G GTY VY+ R + ++ A+K + E E ++ +EI++L++ H
Sbjct: 23 AGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIK---QEINMLKKYSH 79
Query: 189 I-NVIKLEGLVTSR----MSCSLYLVFEYM----EHDLAGLASHPGLKFSEAQVKCYMQQ 239
N+ G + M L+LV E+ DL + + G E + ++
Sbjct: 80 HRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDL--IKNTKGNTLKEEWIAYICRE 137
Query: 240 LLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYR 299
+L GL H H V+HRDIKG N+L+ N +K+ DFG+++ D + T W
Sbjct: 138 ILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMA 197
Query: 300 PPELLLGAT---YYGTAVDLWSTGCILAELYAGKP 331
P + Y DLWS G E+ G P
Sbjct: 198 PEVIACDENPDATYDFKSDLWSLGITAIEMAEGAP 232
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 133/302 (44%), Gaps = 58/302 (19%)
Query: 132 FEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINV 191
++ +++G+G +S V R + + A K + L + + RE I R L H N+
Sbjct: 24 YQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNI 83
Query: 192 IKLEGLVTSRMSCSLYLVFEYME-----HDLAGLASHPGLKFSEAQVKCYMQQLLCGLDH 246
++L ++ YL+F+ + D+ +SEA +QQ+L + H
Sbjct: 84 VRLHDSISEEGH--HYLIFDLVTGGELFEDIVAREY-----YSEADASHCIQQILEAVLH 136
Query: 247 CHSRGVLHRDIKGSNLLIDN---NGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPEL 303
CH GV+HRD+K NLL+ + +K+ADFGLA + +Q Q T Y PE+
Sbjct: 137 CHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQ-QAWFGFAGTPGYLSPEV 195
Query: 304 LLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSKLP 363
L YG VDLW+ G IL L G P +W + +
Sbjct: 196 LRKDP-YGKPVDLWACGVILYILLVGYP-----------------------PFWDEDQ-- 229
Query: 364 HATIFKPQQPYKRCVAETFKDFPAP--------ALALMETLLSIDPADRGSAASALRSEF 415
+ Y++ A + DFP+P A L+ +L+I+P+ R +AA AL+ +
Sbjct: 230 -------HRLYQQIKAGAY-DFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKHPW 281
Query: 416 FT 417
+
Sbjct: 282 IS 283
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 106/221 (47%), Gaps = 44/221 (19%)
Query: 130 DSFEKLDKIGQGTYSNV-----------YRARDLDQKKIVALKKVRFDNLEPESVRFMAR 178
D F+++ +G G++ V Y + LD++K+V LK++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEH----------TLN 90
Query: 179 EIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLK----FSEAQVK 234
E IL+ ++ ++KLE + + + +LY+V EY+ AG L+ FSE +
Sbjct: 91 EKRILQAVNFPFLVKLE--FSFKDNSNLYMVMEYV----AGGEMFSHLRRIGRFSEPHAR 144
Query: 235 CYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVV 294
Y Q++ ++ HS +++RD+K NLLID G +++ DFG A + + R
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA--------KRVKGRTW 196
Query: 295 TLW----YRPPELLLGATYYGTAVDLWSTGCILAELYAGKP 331
L Y PE++L Y AVD W+ G ++ E+ AG P
Sbjct: 197 XLCGTPEYLAPEIILSKG-YNKAVDWWALGVLIYEMAAGYP 236
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 106/221 (47%), Gaps = 44/221 (19%)
Query: 130 DSFEKLDKIGQGTYSNV-----------YRARDLDQKKIVALKKVRFDNLEPESVRFMAR 178
D F+++ +G G++ V Y + LD++K+V LK++
Sbjct: 42 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEH----------TLN 91
Query: 179 EIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLK----FSEAQVK 234
E IL+ ++ ++KLE + + + +LY+V EY+ AG L+ FSE +
Sbjct: 92 EKRILQAVNFPFLVKLE--FSFKDNSNLYMVMEYV----AGGEMFSHLRRIGRFSEPHAR 145
Query: 235 CYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVV 294
Y Q++ ++ HS +++RD+K NLLID G +++ DFG A + + R
Sbjct: 146 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA--------KRVKGRTW 197
Query: 295 TLW----YRPPELLLGATYYGTAVDLWSTGCILAELYAGKP 331
L Y PE++L Y AVD W+ G ++ E+ AG P
Sbjct: 198 XLCGTPEYLAPEIILSKG-YNKAVDWWALGVLIYEMAAGYP 237
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 133/287 (46%), Gaps = 37/287 (12%)
Query: 132 FEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINV 191
+ KIG+G+ V A K+VA+KK+ + + F E+ I+R H NV
Sbjct: 22 LDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF--NEVVIMRDYQHENV 79
Query: 192 IKLEGLVTSRMSCSLYLVFEYMEHD-LAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSR 250
+++ + + L++V E++E L + +H + +E Q+ +L L H++
Sbjct: 80 VEMYN--SYLVGDELWVVMEFLEGGALTDIVTHT--RMNEEQIAAVCLAVLQALSVLHAQ 135
Query: 251 GVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVV-TLWYRPPELLLGATY 309
GV+HRDIK ++L+ ++G +K++DFG + + P +V T ++ PE L+
Sbjct: 136 GVIHRDIKSDSILLTHDGRVKLSDFGFCA--QVSKEVPRRKXLVGTPYWMAPE-LISRLP 192
Query: 310 YGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSKLPHATIFK 369
YG VD+WS G ++ E+ G+P ++ + I + LP
Sbjct: 193 YGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI-------------RDNLP------ 233
Query: 370 PQQPYKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALRSEFF 416
P+ V+ + K F ++ LL DPA R +AA L+ F
Sbjct: 234 PRLKNLHKVSPSLKGF-------LDRLLVRDPAQRATAAELLKHPFL 273
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 106/219 (48%), Gaps = 40/219 (18%)
Query: 130 DSFEKLDKIGQGTYSNV-----------YRARDLDQKKIVALKKVRFDNLEPESVRFMAR 178
D FE++ +G G++ V Y + LD++K+V LK++
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEH----------TLN 83
Query: 179 EIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGL--KFSEAQVKCY 236
E IL+ ++ ++KLE + + + +LY+V EY+ + SH +FSE + Y
Sbjct: 84 EKRILQAVNFPFLVKLE--FSFKDNSNLYMVMEYVPG--GEMFSHLRRIGRFSEPHARFY 139
Query: 237 MQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTL 296
Q++ ++ HS +++RD+K NLLID G +++ DFG A + + R L
Sbjct: 140 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA--------KRVKGRTWXL 191
Query: 297 W----YRPPELLLGATYYGTAVDLWSTGCILAELYAGKP 331
Y PE++L Y AVD W+ G ++ E+ AG P
Sbjct: 192 CGTPEYLAPEIILSKG-YNKAVDWWALGVLIYEMAAGYP 229
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 106/222 (47%), Gaps = 46/222 (20%)
Query: 130 DSFEKLDKIGQGTYSNV-----------YRARDLDQKKIVALKKVRFDNLEPESVRFMAR 178
D FE++ +G G++ V Y + LD++K+V LK++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEH----------TLN 90
Query: 179 EIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEY-----MEHDLAGLASHPGLKFSEAQV 233
E IL+ ++ ++KLE + + + +LY+V EY M L + +FSE
Sbjct: 91 EKRILQAVNFPFLVKLE--FSFKDNSNLYMVMEYAPGGEMFSHLRRIG-----RFSEPHA 143
Query: 234 KCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRV 293
+ Y Q++ ++ HS +++RD+K NL+ID G +++ DFGLA + + R
Sbjct: 144 RFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGLA--------KRVKGRT 195
Query: 294 VTLW----YRPPELLLGATYYGTAVDLWSTGCILAELYAGKP 331
L Y PE++L Y AVD W+ G ++ E+ AG P
Sbjct: 196 WXLCGTPEYLAPEIILSKG-YNKAVDWWALGVLIYEMAAGYP 236
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 109/232 (46%), Gaps = 11/232 (4%)
Query: 130 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHI 189
D ++ D +G G +S V A D +K+VA+K + + LE + M EI +L ++ H
Sbjct: 18 DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGS-MENEIAVLHKIKHP 76
Query: 190 NVIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCH 248
N++ L+ + S LYL+ + + +L G ++E + Q+L + + H
Sbjct: 77 NIVALDDIYES--GGHLYLIMQLVSGGELFDRIVEKGF-YTERDASRLIFQVLDAVKYLH 133
Query: 249 SRGVLHRDIKGSNLL---IDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLL 305
G++HRD+K NLL +D + + I+DFGL+ DP L++ T Y PE +L
Sbjct: 134 DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDP--GSVLSTACGTPGYVAPE-VL 190
Query: 306 GATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYW 357
Y AVD WS G I L G P + + +I K YW
Sbjct: 191 AQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYW 242
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 129/285 (45%), Gaps = 38/285 (13%)
Query: 131 SFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHIN 190
+F ++ +G G +S V+ + K+ ALK ++ +S + EI +L+++ H N
Sbjct: 10 TFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSS--LENEIAVLKKIKHEN 67
Query: 191 VIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHS 249
++ LE + S + YLV + + +L G+ ++E +QQ+L + + H
Sbjct: 68 IVTLEDIYES--TTHYYLVMQLVSGGELFDRILERGV-YTEKDASLVIQQVLSAVKYLHE 124
Query: 250 RGVLHRDIKGSNLLI---DNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLG 306
G++HRD+K NLL + N + I DFGL+ +QN +++ T Y PE +L
Sbjct: 125 NGIVHRDLKPENLLYLTPEENSKIMITDFGLSKM---EQNGIMSTACGTPGYVAPE-VLA 180
Query: 307 ATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSKLPHAT 366
Y AVD WS G I L G P TE + KI E Y
Sbjct: 181 QKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKI-------KEGY---------- 223
Query: 367 IFKPQQPYKRCVAETFKDFPAPALALMETLLSIDPADRGSAASAL 411
++ + P+ ++E+ KDF LL DP +R + AL
Sbjct: 224 -YEFESPFWDDISESAKDFICH-------LLEKDPNERYTCEKAL 260
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 105/222 (47%), Gaps = 46/222 (20%)
Query: 130 DSFEKLDKIGQGTYSNV-----------YRARDLDQKKIVALKKVRFDNLEPESVRFMAR 178
D FE++ +G G++ V Y + LD++K+V LK++
Sbjct: 42 DQFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEH----------TLN 91
Query: 179 EIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEY-----MEHDLAGLASHPGLKFSEAQV 233
E I + ++ ++KLE + + + +LY+V EY M L + +FSE
Sbjct: 92 EKRIQQAVNFPFLVKLE--FSFKDNSNLYMVLEYAPGGEMFSHLRRIG-----RFSEPHA 144
Query: 234 KCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRV 293
+ Y Q++ ++ HS +++RD+K NLLID G +K+ADFG A + + R
Sbjct: 145 RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFA--------KRVKGRT 196
Query: 294 VTLW----YRPPELLLGATYYGTAVDLWSTGCILAELYAGKP 331
L Y PE++L Y AVD W+ G ++ E+ AG P
Sbjct: 197 WXLCGTPEYLAPEIILSKG-YNKAVDWWALGVLIYEMAAGYP 237
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 106/221 (47%), Gaps = 44/221 (19%)
Query: 130 DSFEKLDKIGQGTYSNV-----------YRARDLDQKKIVALKKVRFDNLEPESVRFMAR 178
D F+++ +G G++ V Y + LD++K+V LK++
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEH----------TLN 111
Query: 179 EIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLK----FSEAQVK 234
E IL+ ++ ++KLE + + + +LY+V EY +AG L+ FSE +
Sbjct: 112 EKRILQAVNFPFLVKLE--FSFKDNSNLYMVMEY----VAGGEMFSHLRRIGRFSEPHAR 165
Query: 235 CYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVV 294
Y Q++ ++ HS +++RD+K NLLID G +++ DFG A + +
Sbjct: 166 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA--------KRVKGATW 217
Query: 295 TLW----YRPPELLLGATYYGTAVDLWSTGCILAELYAGKP 331
TL Y PE++L Y AVD W+ G ++ E+ AG P
Sbjct: 218 TLCGTPEYLAPEIILSKG-YNKAVDWWALGVLIYEMAAGYP 257
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 107/223 (47%), Gaps = 44/223 (19%)
Query: 128 RADSFEKLDKIGQGTYSNV-----------YRARDLDQKKIVALKKVRFDNLEPESVRFM 176
+ D F+++ +G G++ V Y + LD++K+V LK++
Sbjct: 26 QLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEH----------T 75
Query: 177 AREIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLK----FSEAQ 232
E IL+ ++ ++KLE + + + +LY+V EY+ AG L+ FSE
Sbjct: 76 LNEKRILQAVNFPFLVKLE--FSFKDNSNLYMVMEYV----AGGEMFSHLRRIGRFSEPH 129
Query: 233 VKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSR 292
+ Y Q++ ++ HS +++RD+K NLLID G +++ DFG A + + R
Sbjct: 130 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDEQGYIQVTDFGFA--------KRVKGR 181
Query: 293 VVTLW----YRPPELLLGATYYGTAVDLWSTGCILAELYAGKP 331
L Y PE++L Y AVD W+ G ++ E+ AG P
Sbjct: 182 TWXLCGTPEYLAPEIILSKG-YNKAVDWWALGVLIYEMAAGYP 223
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 101/204 (49%), Gaps = 11/204 (5%)
Query: 129 ADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDH 188
+D +E + IG G + RD ++VA+K + E+V+ REI R L H
Sbjct: 18 SDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVK---REIINHRSLRH 74
Query: 189 INVIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHC 247
N+++ + ++ + L +V EY +L + G +FSE + + + QQL+ G+ +C
Sbjct: 75 PNIVRFKEVILT--PTHLAIVMEYASGGELFERICNAG-RFSEDEARFFFQQLISGVSYC 131
Query: 248 HSRGVLHRDIKGSNLLIDNNGI--LKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLL 305
H+ V HRD+K N L+D + LKI FG + +QP S V T Y PE+LL
Sbjct: 132 HAMQVCHRDLKLENTLLDGSPAPRLKICAFGYSK-SSVLHSQP-KSTVGTPAYIAPEVLL 189
Query: 306 GATYYGTAVDLWSTGCILAELYAG 329
Y G D+WS G L + G
Sbjct: 190 KKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 104/230 (45%), Gaps = 20/230 (8%)
Query: 125 VPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILR 184
+ + + FE +G+G++ V+ A + A+K ++ D V M ++
Sbjct: 13 IKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKD------VVLMDDDVECTM 66
Query: 185 RLDHINVIKLEGLVTSRMSCS------LYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQ 238
+ + E + M C+ L+ V EY+ KF ++ Y
Sbjct: 67 VEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAA 126
Query: 239 QLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLAS---FYDPDQNQPLTSRVVT 295
+++ GL HS+G+++RD+K N+L+D +G +KIADFG+ D N+ +
Sbjct: 127 EIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFCGTPD-- 184
Query: 296 LWYRPPELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKI 345
Y PE+LLG Y +VD WS G +L E+ G+ G+ E E H I
Sbjct: 185 --YIAPEILLGQK-YNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSI 231
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 106/221 (47%), Gaps = 44/221 (19%)
Query: 130 DSFEKLDKIGQGTYSNV-----------YRARDLDQKKIVALKKVRFDNLEPESVRFMAR 178
D F+++ +G G++ V Y + LD++K+V LK++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEH----------TLN 90
Query: 179 EIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLK----FSEAQVK 234
E IL+ ++ ++KLE + + + +LY+V EY+ AG L+ FSE +
Sbjct: 91 EKRILQAVNFPFLVKLE--FSFKDNSNLYMVMEYV----AGGEMFSHLRRIGRFSEPHAR 144
Query: 235 CYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVV 294
Y Q++ ++ HS +++RD+K NLLID G +++ DFG A + + R
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA--------KRVKGRTW 196
Query: 295 TLWYRP----PELLLGATYYGTAVDLWSTGCILAELYAGKP 331
L P PE++L Y AVD W+ G ++ E+ AG P
Sbjct: 197 XLCGTPEALAPEIILSKG-YNKAVDWWALGVLIYEMAAGYP 236
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 110/212 (51%), Gaps = 19/212 (8%)
Query: 130 DSFEKLDKIGQGTYSNVYRARDL---DQKKIVALKKVRFDNL--EPESVRFMAREIHILR 184
++FE L +G G Y V+ R + D K+ A+K ++ + + ++ E +L
Sbjct: 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVL- 112
Query: 185 RLDHIN----VIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLK--FSEAQVKCYMQ 238
+HI ++ L + L+L+ +Y+ + L +H + F+E +V+ Y+
Sbjct: 113 --EHIRQSPFLVTLH--YAFQTETKLHLILDYI--NGGELFTHLSQRERFTEHEVQIYVG 166
Query: 239 QLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWY 298
+++ L+H H G+++RDIK N+L+D+NG + + DFGL+ + D+ + T+ Y
Sbjct: 167 EIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEY 226
Query: 299 RPPELLLGA-TYYGTAVDLWSTGCILAELYAG 329
P+++ G + + AVD WS G ++ EL G
Sbjct: 227 MAPDIVRGGDSGHDKAVDWWSLGVLMYELLTG 258
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 112/247 (45%), Gaps = 33/247 (13%)
Query: 127 RRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRL 186
R A FE++ +GQG + V +AR+ + A+KK+R E + + E+ +L L
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRH---TEEKLSTILSEVXLLASL 59
Query: 187 DHINVIKLEGLVTSRMS-----------CSLYLVFEYMEH-DLAGLASHPGLKFSEAQVK 234
+H V++ R + +L++ EY E+ L L L +
Sbjct: 60 NHQYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYW 119
Query: 235 CYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLAS--------FYDPDQN 286
+Q+L L + HS+G++HR++K N+ ID + +KI DFGLA QN
Sbjct: 120 RLFRQILEALSYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQN 179
Query: 287 QP-----LTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQ 341
P LTS + T Y E+L G +Y +D +S G I E I P T E+
Sbjct: 180 LPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFE-----XIYPFSTGXER 234
Query: 342 LHKIFKL 348
++ + KL
Sbjct: 235 VNILKKL 241
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 106/221 (47%), Gaps = 44/221 (19%)
Query: 130 DSFEKLDKIGQGTYSNV-----------YRARDLDQKKIVALKKVRFDNLEPESVRFMAR 178
D F+++ +G G++ V Y + LD++K+V LK++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEH----------TLN 90
Query: 179 EIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLK----FSEAQVK 234
E IL+ ++ ++KLE + + + +LY+V EY+ AG L+ F+E +
Sbjct: 91 EKRILQAVNFPFLVKLE--FSFKDNSNLYMVMEYV----AGGEMFSHLRRIGRFAEPHAR 144
Query: 235 CYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVV 294
Y Q++ ++ HS +++RD+K NLLID G +++ DFG A + + R
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA--------KRVKGRTW 196
Query: 295 TLW----YRPPELLLGATYYGTAVDLWSTGCILAELYAGKP 331
L Y PE++L Y AVD W+ G ++ E+ AG P
Sbjct: 197 XLCGTPEYLAPEIILSKG-YNKAVDWWALGVLIYEMAAGYP 236
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 106/219 (48%), Gaps = 40/219 (18%)
Query: 130 DSFEKLDKIGQGTYSNV-----------YRARDLDQKKIVALKKVRFDNLEPESVRFMAR 178
D FE++ +G G++ V + + LD++K+V LK++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEH----------TLN 90
Query: 179 EIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGL--KFSEAQVKCY 236
E IL+ ++ ++KLE + + + +LY+V EY+ + SH +FSE + Y
Sbjct: 91 EKRILQAVNFPFLVKLE--YSFKDNSNLYMVMEYVPG--GEMFSHLRRIGRFSEPHARFY 146
Query: 237 MQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTL 296
Q++ ++ HS +++RD+K NLLID G +++ DFG A + + R L
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA--------KRVKGRTWXL 198
Query: 297 W----YRPPELLLGATYYGTAVDLWSTGCILAELYAGKP 331
Y PE++L Y AVD W+ G ++ E+ AG P
Sbjct: 199 CGTPEYLAPEIILSKG-YNKAVDWWALGVLIYEMAAGYP 236
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 106/219 (48%), Gaps = 40/219 (18%)
Query: 130 DSFEKLDKIGQGTYSNV-----------YRARDLDQKKIVALKKVRFDNLEPESVRFMAR 178
D FE++ +G G++ V + + LD++K+V LK++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEH----------TLN 90
Query: 179 EIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGL--KFSEAQVKCY 236
E IL+ ++ ++KLE + + + +LY+V EY+ + SH +FSE + Y
Sbjct: 91 EKRILQAVNFPFLVKLE--YSFKDNSNLYMVMEYVPG--GEMFSHLRRIGRFSEPHARFY 146
Query: 237 MQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTL 296
Q++ ++ HS +++RD+K NLLID G +++ DFG A + + R L
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA--------KRVKGRTWXL 198
Query: 297 W----YRPPELLLGATYYGTAVDLWSTGCILAELYAGKP 331
Y PE++L Y AVD W+ G ++ E+ AG P
Sbjct: 199 CGTPEYLAPEIILSKG-YNKAVDWWALGVLIYEMAAGYP 236
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 106/221 (47%), Gaps = 44/221 (19%)
Query: 130 DSFEKLDKIGQGTYSNV-----------YRARDLDQKKIVALKKVRFDNLEPESVRFMAR 178
D F+++ +G G++ V Y + LD++K+V LK++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEH----------TLN 90
Query: 179 EIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLK----FSEAQVK 234
E IL+ ++ ++KLE + + + +LY+V EY+ AG L+ FSE +
Sbjct: 91 EKRILQAVNFPFLVKLE--FSFKDNSNLYMVMEYV----AGGEMFSHLRRIGRFSEPHAR 144
Query: 235 CYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVV 294
Y Q++ ++ HS +++RD+K NLLID G +++ DFG A + + R
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA--------KRVKGRTW 196
Query: 295 TLW----YRPPELLLGATYYGTAVDLWSTGCILAELYAGKP 331
L Y PE++L Y AVD W+ G ++ ++ AG P
Sbjct: 197 XLCGTPEYLAPEIILSKG-YNKAVDWWALGVLIYQMAAGYP 236
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 106/219 (48%), Gaps = 40/219 (18%)
Query: 130 DSFEKLDKIGQGTYSNV-----------YRARDLDQKKIVALKKVRFDNLEPESVRFMAR 178
D FE++ +G G++ V + + LD++K+V LK++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEH----------TLN 90
Query: 179 EIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGL--KFSEAQVKCY 236
E IL+ ++ ++KLE + + + +LY+V EY+ + SH +FSE + Y
Sbjct: 91 EKRILQAVNFPFLVKLE--YSFKDNSNLYMVMEYVPG--GEMFSHLRRIGRFSEPHARFY 146
Query: 237 MQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTL 296
Q++ ++ HS +++RD+K NLLID G +++ DFG A + + R L
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA--------KRVKGRTWXL 198
Query: 297 W----YRPPELLLGATYYGTAVDLWSTGCILAELYAGKP 331
Y PE++L Y AVD W+ G ++ E+ AG P
Sbjct: 199 CGTPEYLAPEIILSKG-YNKAVDWWALGVLIYEMAAGYP 236
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 108/224 (48%), Gaps = 24/224 (10%)
Query: 123 GWVPR---RADSFEK-----LDKIGQGTYSNVYRAR----DLDQKKIVALKKVRFDNLEP 170
G VPR FE+ L ++G+G + +V R + ++VA+KK++
Sbjct: 13 GLVPRGSHNMTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST--E 70
Query: 171 ESVRFMAREIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFS 229
E +R REI IL+ L H N++K +G+ S +L L+ EY+ + L +
Sbjct: 71 EHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERID 130
Query: 230 EAQVKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQ---- 285
++ Y Q+ G+++ ++ +HRD+ N+L++N +KI DFGL D+
Sbjct: 131 HIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK 190
Query: 286 -NQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYA 328
+P S + WY P L + + A D+WS G +L EL+
Sbjct: 191 VKEPGESPI--FWYAPES--LTESKFSVASDVWSFGVVLYELFT 230
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 105/222 (47%), Gaps = 46/222 (20%)
Query: 130 DSFEKLDKIGQGTYSNV-----------YRARDLDQKKIVALKKVRFDNLEPESVRFMAR 178
D FE++ +G G++ V Y + LD++K+V LK++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEH----------TLN 90
Query: 179 EIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEY-----MEHDLAGLASHPGLKFSEAQV 233
E IL+ ++ ++KLE + + + +LY+V EY M L + +FSE
Sbjct: 91 EKRILQAVNFPFLVKLE--FSFKDNSNLYMVMEYAPGGEMFSHLRRIG-----RFSEPHA 143
Query: 234 KCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRV 293
+ Y Q++ ++ HS +++RD+K NL+ID G +++ DFG A + + R
Sbjct: 144 RFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGFA--------KRVKGRT 195
Query: 294 VTLW----YRPPELLLGATYYGTAVDLWSTGCILAELYAGKP 331
L Y PE++L Y AVD W+ G ++ E+ AG P
Sbjct: 196 WXLCGTPEYLAPEIILSKG-YNKAVDWWALGVLIYEMAAGYP 236
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 108/224 (48%), Gaps = 24/224 (10%)
Query: 123 GWVPR---RADSFEK-----LDKIGQGTYSNVYRAR----DLDQKKIVALKKVRFDNLEP 170
G VPR FE+ L ++G+G + +V R + ++VA+KK++
Sbjct: 13 GLVPRGSHNMTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST--E 70
Query: 171 ESVRFMAREIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFS 229
E +R REI IL+ L H N++K +G+ S +L L+ EY+ + L +
Sbjct: 71 EHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERID 130
Query: 230 EAQVKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQ---- 285
++ Y Q+ G+++ ++ +HRD+ N+L++N +KI DFGL D+
Sbjct: 131 HIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK 190
Query: 286 -NQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYA 328
+P S + WY P L + + A D+WS G +L EL+
Sbjct: 191 VKEPGESPI--FWYAPES--LTESKFSVASDVWSFGVVLYELFT 230
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 101/204 (49%), Gaps = 16/204 (7%)
Query: 135 LDKIGQGTYSNVYRAR----DLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHIN 190
L ++G+G + +V R + ++VA+KK++ E +R REI IL+ L H N
Sbjct: 22 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST--EEHLRDFEREIEILKSLQHDN 79
Query: 191 VIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHS 249
++K +G+ S +L L+ EY+ + L + ++ Y Q+ G+++ +
Sbjct: 80 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 139
Query: 250 RGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQN-----QPLTSRVVTLWYRPPELL 304
+ +HRD+ N+L++N +KI DFGL D+ +P S + WY P
Sbjct: 140 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI--FWYAPES-- 195
Query: 305 LGATYYGTAVDLWSTGCILAELYA 328
L + + A D+WS G +L EL+
Sbjct: 196 LTESKFSVASDVWSFGVVLYELFT 219
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 104/222 (46%), Gaps = 46/222 (20%)
Query: 130 DSFEKLDKIGQGTYSNV-----------YRARDLDQKKIVALKKVRFDNLEPESVRFMAR 178
D FE++ +G G++ V Y + LD++K+V LK++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEH----------TLN 91
Query: 179 EIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEY-----MEHDLAGLASHPGLKFSEAQV 233
E IL+ ++ + KLE + + + +LY+V EY M L + +FSE
Sbjct: 92 EKRILQAVNFPFLTKLE--FSFKDNSNLYMVMEYAPGGEMFSHLRRIG-----RFSEPHA 144
Query: 234 KCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRV 293
+ Y Q++ ++ HS +++RD+K NL+ID G +K+ DFG A + + R
Sbjct: 145 RFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFA--------KRVKGRT 196
Query: 294 VTLW----YRPPELLLGATYYGTAVDLWSTGCILAELYAGKP 331
L Y PE++L Y AVD W+ G ++ E+ AG P
Sbjct: 197 WXLCGTPEYLAPEIILSKG-YNKAVDWWALGVLIYEMAAGYP 237
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 104/222 (46%), Gaps = 46/222 (20%)
Query: 130 DSFEKLDKIGQGTYSNV-----------YRARDLDQKKIVALKKVRFDNLEPESVRFMAR 178
D FE++ +G G++ V Y + LD++K+V LK++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEH----------TLN 91
Query: 179 EIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEY-----MEHDLAGLASHPGLKFSEAQV 233
E IL+ ++ + KLE + + + +LY+V EY M L + +FSE
Sbjct: 92 EKRILQAVNFPFLTKLE--FSFKDNSNLYMVMEYAPGGEMFSHLRRIG-----RFSEPHA 144
Query: 234 KCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRV 293
+ Y Q++ ++ HS +++RD+K NL+ID G +K+ DFG A + + R
Sbjct: 145 RFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFA--------KRVKGRT 196
Query: 294 VTLW----YRPPELLLGATYYGTAVDLWSTGCILAELYAGKP 331
L Y PE++L Y AVD W+ G ++ E+ AG P
Sbjct: 197 WXLCGTPEYLAPEIILSKG-YNKAVDWWALGVLIYEMAAGYP 237
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 101/204 (49%), Gaps = 16/204 (7%)
Query: 135 LDKIGQGTYSNVYRAR----DLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHIN 190
L ++G+G + +V R + ++VA+KK++ E +R REI IL+ L H N
Sbjct: 18 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST--EEHLRDFEREIEILKSLQHDN 75
Query: 191 VIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHS 249
++K +G+ S +L L+ EY+ + L + ++ Y Q+ G+++ +
Sbjct: 76 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICKGMEYLGT 135
Query: 250 RGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQN-----QPLTSRVVTLWYRPPELL 304
+ +HRD+ N+L++N +KI DFGL D+ +P S + WY P
Sbjct: 136 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI--FWYAPES-- 191
Query: 305 LGATYYGTAVDLWSTGCILAELYA 328
L + + A D+WS G +L EL+
Sbjct: 192 LTESKFSVASDVWSFGVVLYELFT 215
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 101/204 (49%), Gaps = 16/204 (7%)
Query: 135 LDKIGQGTYSNVYRAR----DLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHIN 190
L ++G+G + +V R + ++VA+KK++ E +R REI IL+ L H N
Sbjct: 18 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST--EEHLRDFEREIEILKSLQHDN 75
Query: 191 VIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHS 249
++K +G+ S +L L+ EY+ + L + ++ Y Q+ G+++ +
Sbjct: 76 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 135
Query: 250 RGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQN-----QPLTSRVVTLWYRPPELL 304
+ +HRD+ N+L++N +KI DFGL D+ +P S + WY P
Sbjct: 136 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI--FWYAPES-- 191
Query: 305 LGATYYGTAVDLWSTGCILAELYA 328
L + + A D+WS G +L EL+
Sbjct: 192 LTESKFSVASDVWSFGVVLYELFT 215
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 101/204 (49%), Gaps = 16/204 (7%)
Query: 135 LDKIGQGTYSNVYRAR----DLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHIN 190
L ++G+G + +V R + ++VA+KK++ E +R REI IL+ L H N
Sbjct: 20 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST--EEHLRDFEREIEILKSLQHDN 77
Query: 191 VIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHS 249
++K +G+ S +L L+ EY+ + L + ++ Y Q+ G+++ +
Sbjct: 78 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 137
Query: 250 RGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQN-----QPLTSRVVTLWYRPPELL 304
+ +HRD+ N+L++N +KI DFGL D+ +P S + WY P
Sbjct: 138 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI--FWYAPES-- 193
Query: 305 LGATYYGTAVDLWSTGCILAELYA 328
L + + A D+WS G +L EL+
Sbjct: 194 LTESKFSVASDVWSFGVVLYELFT 217
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 101/204 (49%), Gaps = 16/204 (7%)
Query: 135 LDKIGQGTYSNV----YRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHIN 190
L ++G+G + +V Y + ++VA+KK++ E +R REI IL+ L H N
Sbjct: 46 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST--EEHLRDFEREIEILKSLQHDN 103
Query: 191 VIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHS 249
++K +G+ S +L L+ EY+ + L + ++ Y Q+ G+++ +
Sbjct: 104 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 163
Query: 250 RGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQN-----QPLTSRVVTLWYRPPELL 304
+ +HRD+ N+L++N +KI DFGL D+ +P S + WY P
Sbjct: 164 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI--FWYAPES-- 219
Query: 305 LGATYYGTAVDLWSTGCILAELYA 328
L + + A D+WS G +L EL+
Sbjct: 220 LTESKFSVASDVWSFGVVLYELFT 243
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 105/219 (47%), Gaps = 40/219 (18%)
Query: 130 DSFEKLDKIGQGTYSNV-----------YRARDLDQKKIVALKKVRFDNLEPESVRFMAR 178
D FE++ +G G++ V Y + LD++K+V LK++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEH----------TLN 90
Query: 179 EIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGL--KFSEAQVKCY 236
E IL+ ++ ++KLE + + + +LY+V EY+ + SH +F E + Y
Sbjct: 91 EKRILQAVNFPFLVKLE--FSFKDNSNLYMVMEYVPG--GEMFSHLRRIGRFXEPHARFY 146
Query: 237 MQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTL 296
Q++ ++ HS +++RD+K NLLID G +++ DFG A + + R L
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA--------KRVKGRTWXL 198
Query: 297 W----YRPPELLLGATYYGTAVDLWSTGCILAELYAGKP 331
Y PE++L Y AVD W+ G ++ E+ AG P
Sbjct: 199 CGTPEYLAPEIILSKG-YNKAVDWWALGVLIYEMAAGYP 236
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 105/219 (47%), Gaps = 40/219 (18%)
Query: 130 DSFEKLDKIGQGTYSNV-----------YRARDLDQKKIVALKKVRFDNLEPESVRFMAR 178
D FE++ +G G++ V Y + LD++K+V LK++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEH----------TLN 91
Query: 179 EIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGL--KFSEAQVKCY 236
E IL+ ++ ++KLE + + + +LY+V EY+ + SH +F E + Y
Sbjct: 92 EKRILQAVNFPFLVKLE--FSFKDNSNLYMVMEYVPG--GEMFSHLRRIGRFXEPHARFY 147
Query: 237 MQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTL 296
Q++ ++ HS +++RD+K NLLID G +++ DFG A + + R L
Sbjct: 148 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA--------KRVKGRTWXL 199
Query: 297 W----YRPPELLLGATYYGTAVDLWSTGCILAELYAGKP 331
Y PE++L Y AVD W+ G ++ E+ AG P
Sbjct: 200 CGTPEYLAPEIILSKG-YNKAVDWWALGVLIYEMAAGYP 237
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 104/222 (46%), Gaps = 46/222 (20%)
Query: 130 DSFEKLDKIGQGTYSNV-----------YRARDLDQKKIVALKKVRFDNLEPESVRFMAR 178
D FE++ +G G++ V Y + LD++K+V LK++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEH----------TLN 90
Query: 179 EIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEY-----MEHDLAGLASHPGLKFSEAQV 233
E IL+ ++ ++KLE + + + +LY+V EY M L + +F E
Sbjct: 91 EKRILQAVNFPFLVKLE--FSFKDNSNLYMVMEYAPGGEMFSHLRRIG-----RFXEPHA 143
Query: 234 KCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRV 293
+ Y Q++ ++ HS +++RD+K NL+ID G +K+ DFG A + + R
Sbjct: 144 RFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFA--------KRVKGRT 195
Query: 294 VTLW----YRPPELLLGATYYGTAVDLWSTGCILAELYAGKP 331
L Y PE++L Y AVD W+ G ++ E+ AG P
Sbjct: 196 WXLCGTPEYLAPEIILSKG-YNKAVDWWALGVLIYEMAAGYP 236
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 105/219 (47%), Gaps = 40/219 (18%)
Query: 130 DSFEKLDKIGQGTYSNV-----------YRARDLDQKKIVALKKVRFDNLEPESVRFMAR 178
D FE++ +G G++ V Y + LD++K+V LK++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEH----------TLN 90
Query: 179 EIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGL--KFSEAQVKCY 236
E IL+ ++ ++KLE + + + +LY+V EY+ + SH +F E + Y
Sbjct: 91 EKRILQAVNFPFLVKLE--FSFKDNSNLYMVMEYVPG--GEMFSHLRRIGRFXEPHARFY 146
Query: 237 MQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTL 296
Q++ ++ HS +++RD+K NLLID G +++ DFG A + + R L
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA--------KRVKGRTWXL 198
Query: 297 W----YRPPELLLGATYYGTAVDLWSTGCILAELYAGKP 331
Y PE++L Y AVD W+ G ++ E+ AG P
Sbjct: 199 CGTPEYLAPEIILSKG-YNKAVDWWALGVLIYEMAAGYP 236
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 105/221 (47%), Gaps = 44/221 (19%)
Query: 130 DSFEKLDKIGQGTYSNV-----------YRARDLDQKKIVALKKVRFDNLEPESVRFMAR 178
D F+++ +G G++ V Y + LD++K+V LK++
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEH----------TLN 111
Query: 179 EIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLK----FSEAQVK 234
E IL+ ++ ++KLE + + + +LY+V EY +AG L+ F E +
Sbjct: 112 EKRILQAVNFPFLVKLE--FSFKDNSNLYMVMEY----VAGGEMFSHLRRIGRFXEPHAR 165
Query: 235 CYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVV 294
Y Q++ ++ HS +++RD+K NLLID G +++ DFG A + + R
Sbjct: 166 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA--------KRVKGRTW 217
Query: 295 TLW----YRPPELLLGATYYGTAVDLWSTGCILAELYAGKP 331
L Y PE++L Y AVD W+ G ++ E+ AG P
Sbjct: 218 XLCGTPEYLAPEIILSKG-YNKAVDWWALGVLIYEMAAGYP 257
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 101/204 (49%), Gaps = 16/204 (7%)
Query: 135 LDKIGQGTYSNVYRAR----DLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHIN 190
L ++G+G + +V R + ++VA+KK++ E +R REI IL+ L H N
Sbjct: 15 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST--EEHLRDFEREIEILKSLQHDN 72
Query: 191 VIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHS 249
++K +G+ S +L L+ EY+ + L + ++ Y Q+ G+++ +
Sbjct: 73 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 132
Query: 250 RGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQ-----NQPLTSRVVTLWYRPPELL 304
+ +HRD+ N+L++N +KI DFGL D+ +P S + WY P
Sbjct: 133 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI--FWYAPES-- 188
Query: 305 LGATYYGTAVDLWSTGCILAELYA 328
L + + A D+WS G +L EL+
Sbjct: 189 LTESKFSVASDVWSFGVVLYELFT 212
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 105/221 (47%), Gaps = 44/221 (19%)
Query: 130 DSFEKLDKIGQGTYSNV-----------YRARDLDQKKIVALKKVRFDNLEPESVRFMAR 178
D F+++ +G G++ V Y + LD++K+V LK++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEH----------TLN 90
Query: 179 EIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLK----FSEAQVK 234
E IL+ ++ ++KLE + + + +LY+V EY+ AG L+ F E +
Sbjct: 91 EKRILQAVNFPFLVKLE--FSFKDNSNLYMVMEYV----AGGEMFSHLRRIGRFXEPHAR 144
Query: 235 CYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVV 294
Y Q++ ++ HS +++RD+K NLLID G +++ DFG A + + R
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA--------KRVKGRTW 196
Query: 295 TLW----YRPPELLLGATYYGTAVDLWSTGCILAELYAGKP 331
L Y PE++L Y AVD W+ G ++ E+ AG P
Sbjct: 197 XLCGTPEYLAPEIILSKG-YNKAVDWWALGVLIYEMAAGYP 236
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 101/204 (49%), Gaps = 16/204 (7%)
Query: 135 LDKIGQGTYSNVYRAR----DLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHIN 190
L ++G+G + +V R + ++VA+KK++ E +R REI IL+ L H N
Sbjct: 21 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST--EEHLRDFEREIEILKSLQHDN 78
Query: 191 VIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHS 249
++K +G+ S +L L+ EY+ + L + ++ Y Q+ G+++ +
Sbjct: 79 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 138
Query: 250 RGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQN-----QPLTSRVVTLWYRPPELL 304
+ +HRD+ N+L++N +KI DFGL D+ +P S + WY P
Sbjct: 139 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI--FWYAPES-- 194
Query: 305 LGATYYGTAVDLWSTGCILAELYA 328
L + + A D+WS G +L EL+
Sbjct: 195 LTESKFSVASDVWSFGVVLYELFT 218
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 101/204 (49%), Gaps = 16/204 (7%)
Query: 135 LDKIGQGTYSNVYRAR----DLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHIN 190
L ++G+G + +V R + ++VA+KK++ E +R REI IL+ L H N
Sbjct: 14 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST--EEHLRDFEREIEILKSLQHDN 71
Query: 191 VIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHS 249
++K +G+ S +L L+ EY+ + L + ++ Y Q+ G+++ +
Sbjct: 72 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 131
Query: 250 RGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQ-----NQPLTSRVVTLWYRPPELL 304
+ +HRD+ N+L++N +KI DFGL D+ +P S + WY P
Sbjct: 132 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI--FWYAPES-- 187
Query: 305 LGATYYGTAVDLWSTGCILAELYA 328
L + + A D+WS G +L EL+
Sbjct: 188 LTESKFSVASDVWSFGVVLYELFT 211
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 105/221 (47%), Gaps = 44/221 (19%)
Query: 130 DSFEKLDKIGQGTYSNV-----------YRARDLDQKKIVALKKVRFDNLEPESVRFMAR 178
D F+++ +G G++ V Y + LD++K+V LK++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEH----------TLN 90
Query: 179 EIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLK----FSEAQVK 234
E IL+ ++ ++KLE + + + +LY+V EY+ AG L+ F E +
Sbjct: 91 EKRILQAVNFPFLVKLE--FSFKDNSNLYMVMEYV----AGGEMFSHLRRIGRFXEPHAR 144
Query: 235 CYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVV 294
Y Q++ ++ HS +++RD+K NLLID G +++ DFG A + + R
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA--------KRVKGRTW 196
Query: 295 TLW----YRPPELLLGATYYGTAVDLWSTGCILAELYAGKP 331
L Y PE++L Y AVD W+ G ++ E+ AG P
Sbjct: 197 XLCGTPEYLAPEIILSKG-YNKAVDWWALGVLIYEMAAGYP 236
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 101/204 (49%), Gaps = 16/204 (7%)
Query: 135 LDKIGQGTYSNV----YRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHIN 190
L ++G+G + +V Y + ++VA+KK++ E +R REI IL+ L H N
Sbjct: 19 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST--EEHLRDFEREIEILKSLQHDN 76
Query: 191 VIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHS 249
++K +G+ S +L L+ EY+ + L + ++ Y Q+ G+++ +
Sbjct: 77 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 136
Query: 250 RGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQ-----NQPLTSRVVTLWYRPPELL 304
+ +HRD+ N+L++N +KI DFGL D+ +P S + WY P
Sbjct: 137 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI--FWYAPES-- 192
Query: 305 LGATYYGTAVDLWSTGCILAELYA 328
L + + A D+WS G +L EL+
Sbjct: 193 LTESKFSVASDVWSFGVVLYELFT 216
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 134/307 (43%), Gaps = 58/307 (18%)
Query: 127 RRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRL 186
R + ++ +++G+G +S V R + + A + L + + RE I R L
Sbjct: 8 RFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLL 67
Query: 187 DHINVIKLEGLVTSRMSCSLYLVFEYME-----HDLAGLASHPGLKFSEAQVKCYMQQLL 241
H N+++L ++ YL+F+ + D+ +SEA +QQ+L
Sbjct: 68 KHPNIVRLHDSISE--EGHHYLIFDLVTGGELFEDIVAREY-----YSEADASHCIQQIL 120
Query: 242 CGLDHCHSRGVLHRDIKGSNLLIDNN---GILKIADFGLASFYDPDQNQPLTSRVVTLWY 298
+ HCH GV+HR++K NLL+ + +K+ADFGLA + +Q Q T Y
Sbjct: 121 EAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQ-QAWFGFAGTPGY 179
Query: 299 RPPELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWR 358
PE+L YG VDLW+ G IL L G P +W
Sbjct: 180 LSPEVLRKDP-YGKPVDLWACGVILYILLVGYP-----------------------PFWD 215
Query: 359 KSKLPHATIFKPQQPYKRCVAETFKDFPAP--------ALALMETLLSIDPADRGSAASA 410
+ + + Y++ A + DFP+P A L+ +L+I+P+ R +AA A
Sbjct: 216 EDQ---------HRLYQQIKAGAY-DFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEA 265
Query: 411 LRSEFFT 417
L+ + +
Sbjct: 266 LKHPWIS 272
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 106/221 (47%), Gaps = 44/221 (19%)
Query: 130 DSFEKLDKIGQGTYSNV-----------YRARDLDQKKIVALKKVRFDNLEPESVRFMAR 178
D F+++ +G G++ V Y + LD++K+V LK++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEH----------TLN 90
Query: 179 EIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLK----FSEAQVK 234
E IL+ ++ ++KLE + + + +LY+V EY+ AG L+ FSE +
Sbjct: 91 EKRILQAVNFPFLVKLE--FSFKDNSNLYMVMEYV----AGGEMFSHLRRIGRFSEPHAR 144
Query: 235 CYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVV 294
Y Q++ ++ HS +++RD+K NL+ID G +++ DFG A + + R
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLIIDQQGYIQVTDFGFA--------KRVKGRTW 196
Query: 295 TLW----YRPPELLLGATYYGTAVDLWSTGCILAELYAGKP 331
L Y PE+++ Y AVD W+ G ++ E+ AG P
Sbjct: 197 XLCGTPEYLAPEIIISKG-YNKAVDWWALGVLIYEMAAGYP 236
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 101/204 (49%), Gaps = 16/204 (7%)
Query: 135 LDKIGQGTYSNVYRAR----DLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHIN 190
L ++G+G + +V R + ++VA+KK++ E +R REI IL+ L H N
Sbjct: 13 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST--EEHLRDFEREIEILKSLQHDN 70
Query: 191 VIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHS 249
++K +G+ S +L L+ EY+ + L + ++ Y Q+ G+++ +
Sbjct: 71 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 130
Query: 250 RGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQ-----NQPLTSRVVTLWYRPPELL 304
+ +HRD+ N+L++N +KI DFGL D+ +P S + WY P
Sbjct: 131 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI--FWYAPES-- 186
Query: 305 LGATYYGTAVDLWSTGCILAELYA 328
L + + A D+WS G +L EL+
Sbjct: 187 LTESKFSVASDVWSFGVVLYELFT 210
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 109/229 (47%), Gaps = 20/229 (8%)
Query: 128 RADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDN-LEPESVRFMAREIHILRRL 186
+ F L +G+G++ V A +++ A+K ++ D ++ + V E +L L
Sbjct: 17 KLTDFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALL 76
Query: 187 DHINVIKLEGLVTSRMSC-----SLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQL 240
D +T SC LY V EY+ DL G KF E Q Y ++
Sbjct: 77 DK------PPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVG-KFKEPQAVFYAAEI 129
Query: 241 LCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVV--TLWY 298
GL H RG+++RD+K N+++D+ G +KIADFG+ + D +T+R T Y
Sbjct: 130 SIGLFFLHKRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDG---VTTREFCGTPDY 186
Query: 299 RPPELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFK 347
PE ++ YG +VD W+ G +L E+ AG+P G E E I +
Sbjct: 187 IAPE-IIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIME 234
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 124/267 (46%), Gaps = 20/267 (7%)
Query: 130 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKV------RFDNLEPESVR-FMAREIHI 182
+++E + +G+G S V R K A+K + F E + +R +E+ I
Sbjct: 17 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 76
Query: 183 LRRLD-HINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLL 241
LR++ H N+I+L+ T + +LVF+ M+ + SE + + M+ LL
Sbjct: 77 LRKVSGHPNIIQLKD--TYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALL 134
Query: 242 CGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPP 301
+ H ++HRD+K N+L+D++ +K+ DFG + DP + L S T Y P
Sbjct: 135 EVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDP--GEKLRSVCGTPSYLAP 192
Query: 302 ELLLGATY-----YGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFK---LCGSPS 353
E++ + YG VD+WSTG I+ L AG P R ++ L I GSP
Sbjct: 193 EIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPE 252
Query: 354 EDYWRKSKLPHATIFKPQQPYKRCVAE 380
D + + + F QP KR AE
Sbjct: 253 WDDYSDTVKDLVSRFLVVQPQKRYTAE 279
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 106/223 (47%), Gaps = 44/223 (19%)
Query: 128 RADSFEKLDKIGQGTYSNV-----------YRARDLDQKKIVALKKVRFDNLEPESVRFM 176
+ D F+++ +G G++ V Y + LD++K+V LK++
Sbjct: 34 QLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEH----------T 83
Query: 177 AREIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLK----FSEAQ 232
E IL+ ++ ++KLE + + + +LY+V EY+ AG L+ F E
Sbjct: 84 LNEKRILQAVNFPFLVKLE--FSFKDNSNLYMVMEYV----AGGEMFSHLRRIGRFXEPH 137
Query: 233 VKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSR 292
+ Y Q++ ++ HS +++RD+K NLLID G +++ DFG A + + R
Sbjct: 138 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA--------KRVKGR 189
Query: 293 VVTLW----YRPPELLLGATYYGTAVDLWSTGCILAELYAGKP 331
L Y PE++L Y AVD W+ G ++ E+ AG P
Sbjct: 190 TWXLCGTPEYLAPEIILSKG-YNKAVDWWALGVLIYEMAAGYP 231
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 105/219 (47%), Gaps = 40/219 (18%)
Query: 130 DSFEKLDKIGQGTYSNV-----------YRARDLDQKKIVALKKVRFDNLEPESVRFMAR 178
D FE++ +G G++ V Y + LD++K+V LK++
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEH----------TLN 83
Query: 179 EIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGL--KFSEAQVKCY 236
E IL+ ++ ++KLE + + + +LY+V EY+ + SH +F E + Y
Sbjct: 84 EKRILQAVNFPFLVKLE--FSFKDNSNLYMVMEYVPG--GEMFSHLRRIGRFXEPHARFY 139
Query: 237 MQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTL 296
Q++ ++ HS +++RD+K NLLID G +++ DFG A + + R L
Sbjct: 140 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA--------KRVKGRTWXL 191
Query: 297 W----YRPPELLLGATYYGTAVDLWSTGCILAELYAGKP 331
Y PE++L Y AVD W+ G ++ E+ AG P
Sbjct: 192 CGTPEYLAPEIILSKG-YNKAVDWWALGVLIYEMAAGYP 229
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 101/204 (49%), Gaps = 16/204 (7%)
Query: 135 LDKIGQGTYSNVYRAR----DLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHIN 190
L ++G+G + +V R + ++VA+KK++ E +R REI IL+ L H N
Sbjct: 15 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST--EEHLRDFEREIEILKSLQHDN 72
Query: 191 VIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHS 249
++K +G+ S +L L+ EY+ + L + ++ Y Q+ G+++ +
Sbjct: 73 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 132
Query: 250 RGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQ-----NQPLTSRVVTLWYRPPELL 304
+ +HRD+ N+L++N +KI DFGL D+ +P S + WY P
Sbjct: 133 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI--FWYAPES-- 188
Query: 305 LGATYYGTAVDLWSTGCILAELYA 328
L + + A D+WS G +L EL+
Sbjct: 189 LTESKFSVASDVWSFGVVLYELFT 212
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 105/197 (53%), Gaps = 11/197 (5%)
Query: 137 KIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINVIKLEG 196
KIG+G+ V A + K VA+KK+ + + F E+ I+R H NV+ +
Sbjct: 52 KIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLF--NEVVIMRDYHHDNVVDMYS 109
Query: 197 LVTSRMSCSLYLVFEYMEHD-LAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVLHR 255
+ + L++V E++E L + +H + +E Q+ +L L + H++GV+HR
Sbjct: 110 --SYLVGDELWVVMEFLEGGALTDIVTHT--RMNEEQIATVCLSVLRALSYLHNQGVIHR 165
Query: 256 DIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVV-TLWYRPPELLLGATYYGTAV 314
DIK ++L+ ++G +K++DFG + + P +V T ++ PE ++ YGT V
Sbjct: 166 DIKSDSILLTSDGRIKLSDFGFCA--QVSKEVPKRKXLVGTPYWMAPE-VISRLPYGTEV 222
Query: 315 DLWSTGCILAELYAGKP 331
D+WS G ++ E+ G+P
Sbjct: 223 DIWSLGIMVIEMIDGEP 239
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 101/204 (49%), Gaps = 16/204 (7%)
Query: 135 LDKIGQGTYSNVYRAR----DLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHIN 190
L ++G+G + +V R + ++VA+KK++ E +R REI IL+ L H N
Sbjct: 15 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST--EEHLRDFEREIEILKSLQHDN 72
Query: 191 VIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHS 249
++K +G+ S +L L+ EY+ + L + ++ Y Q+ G+++ +
Sbjct: 73 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 132
Query: 250 RGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQ-----NQPLTSRVVTLWYRPPELL 304
+ +HRD+ N+L++N +KI DFGL D+ +P S + WY P
Sbjct: 133 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPI--FWYAPES-- 188
Query: 305 LGATYYGTAVDLWSTGCILAELYA 328
L + + A D+WS G +L EL+
Sbjct: 189 LTESKFSVASDVWSFGVVLYELFT 212
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 105/221 (47%), Gaps = 44/221 (19%)
Query: 130 DSFEKLDKIGQGTYSNV-----------YRARDLDQKKIVALKKVRFDNLEPESVRFMAR 178
D F+++ +G G++ V Y + LD++K+V LK++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEH----------TLN 90
Query: 179 EIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLK----FSEAQVK 234
E IL+ ++ ++KLE + + + +LY+V EY+ AG L+ F E +
Sbjct: 91 EKRILQAVNFPFLVKLE--FSFKDNSNLYMVMEYV----AGGEMFSHLRRIGRFXEPHAR 144
Query: 235 CYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVV 294
Y Q++ ++ HS +++RD+K NLLID G +++ DFG A + + R
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA--------KRVKGRTW 196
Query: 295 TLW----YRPPELLLGATYYGTAVDLWSTGCILAELYAGKP 331
L Y PE++L Y AVD W+ G ++ E+ AG P
Sbjct: 197 XLCGTPEYLAPEIILSKG-YNKAVDWWALGVLIYEMAAGYP 236
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 105/221 (47%), Gaps = 44/221 (19%)
Query: 130 DSFEKLDKIGQGTYSNV-----------YRARDLDQKKIVALKKVRFDNLEPESVRFMAR 178
D F+++ +G G++ V Y + LD++K+V LK++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEH----------TLN 90
Query: 179 EIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLK----FSEAQVK 234
E IL+ ++ ++KLE + + + +LY+V EY+ AG L+ FSE +
Sbjct: 91 EKRILQAVNFPFLVKLE--FSFKDNSNLYMVMEYV----AGGEMFSHLRRIGRFSEPHAR 144
Query: 235 CYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVV 294
Y Q++ ++ HS +++RD+K NLLID G +++ DFG A + + R
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA--------KRVKGRTW 196
Query: 295 TLW----YRPPELLLGATYYGTAVDLWSTGCILAELYAGKP 331
L Y P ++L Y AVD W+ G ++ E+ AG P
Sbjct: 197 XLCGTPEYLAPAIILSKG-YNKAVDWWALGVLIYEMAAGYP 236
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 138/288 (47%), Gaps = 37/288 (12%)
Query: 137 KIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINVIKLEG 196
KIG+G+ V AR+ + VA+K + + + F E+ I+R H NV+++
Sbjct: 52 KIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLF--NEVVIMRDYQHFNVVEMYK 109
Query: 197 LVTSRMSCSLYLVFEYMEHD-LAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVLHR 255
+ + L+++ E+++ L + S ++ +E Q+ + +L L + H++GV+HR
Sbjct: 110 --SYLVGEELWVLMEFLQGGALTDIVSQ--VRLNEEQIATVCEAVLQALAYLHAQGVIHR 165
Query: 256 DIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVV-TLWYRPPELLLGATYYGTAV 314
DIK ++L+ +G +K++DFG + D P +V T ++ PE ++ + Y T V
Sbjct: 166 DIKSDSILLTLDGRVKLSDFGFCAQISKD--VPKRKXLVGTPYWMAPE-VISRSLYATEV 222
Query: 315 DLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSKLPHATIFKPQQPY 374
D+WS G ++ E+ G+P + V+ + ++ R S P K + +
Sbjct: 223 DIWSLGIMVIEMVDGEPPYFSDSPVQAMKRL------------RDSPPP-----KLKNSH 265
Query: 375 KRCVAETFKDFPAPALALMETLLSIDPADRGSAASALRSEFFTMKPLP 422
K V+ +DF +E +L DP +R +A L F LP
Sbjct: 266 K--VSPVLRDF-------LERMLVRDPQERATAQELLDHPFLLQTGLP 304
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 100/204 (49%), Gaps = 11/204 (5%)
Query: 129 ADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDH 188
+D +E + IG G + RD ++VA+K + E+V+ REI R L H
Sbjct: 18 SDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVK---REIINHRSLRH 74
Query: 189 INVIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHC 247
N+++ + ++ + L +V EY +L + G +FSE + + + QQL+ G+ +C
Sbjct: 75 PNIVRFKEVILT--PTHLAIVMEYASGGELFERICNAG-RFSEDEARFFFQQLISGVSYC 131
Query: 248 HSRGVLHRDIKGSNLLIDNNGI--LKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLL 305
H+ V HRD+K N L+D + LKI FG + +QP V T Y PE+LL
Sbjct: 132 HAMQVCHRDLKLENTLLDGSPAPRLKICAFGYSK-SSVLHSQP-KDTVGTPAYIAPEVLL 189
Query: 306 GATYYGTAVDLWSTGCILAELYAG 329
Y G D+WS G L + G
Sbjct: 190 KKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 117/223 (52%), Gaps = 18/223 (8%)
Query: 138 IGQGTYSNVY--RARDLDQKKI-VALKKVRFDNLEPESVRFMAREIHILRRLDHINVIKL 194
IG G V R R Q+ + VA+K ++ E + F++ E I+ + DH N+I+L
Sbjct: 57 IGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLS-EASIMGQFDHPNIIRL 115
Query: 195 EGLVT-SRMSCSLYLVFEYMEHDL--AGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRG 251
EG+VT R++ +V EYME+ L +H G +F+ Q+ ++ + G+ + G
Sbjct: 116 EGVVTRGRLAM---IVTEYMENGSLDTFLRTHDG-QFTIMQLVGMLRGVGAGMRYLSDLG 171
Query: 252 VLHRDIKGSNLLIDNNGILKIADFGLASFY--DPDQNQPLTSRVVTLWYRPPELLLGATY 309
+HRD+ N+L+D+N + K++DFGL+ DPD T + + + PE + T
Sbjct: 172 YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIAFRT- 230
Query: 310 YGTAVDLWSTGCILAEL--YAGKPI--MPGRTEVEQLHKIFKL 348
+ +A D+WS G ++ E+ Y +P M R + + + ++L
Sbjct: 231 FSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRL 273
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 105/207 (50%), Gaps = 15/207 (7%)
Query: 135 LDKI-GQGTYSNVYRAR-DLDQKK--IVALKKVRFDNLEPESVRFMAREIHILRRLDHIN 190
+DK+ G G + V R L KK VA+K ++ E + F+ E I+ + DH N
Sbjct: 49 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG-EASIMGQFDHPN 107
Query: 191 VIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHS 249
+I+LEG+VT S + +V EYME+ L +F+ Q+ ++ + G+ +
Sbjct: 108 IIRLEGVVTK--SKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD 165
Query: 250 RGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSR---VVTLWYRPPELLLG 306
G +HRD+ N+LI++N + K++DFGLA + D T+R + W P +
Sbjct: 166 MGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEA--IA 223
Query: 307 ATYYGTAVDLWSTGCILAEL--YAGKP 331
+ +A D+WS G +L E+ Y +P
Sbjct: 224 YRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 117/223 (52%), Gaps = 18/223 (8%)
Query: 138 IGQGTYSNVY--RARDLDQKKI-VALKKVRFDNLEPESVRFMAREIHILRRLDHINVIKL 194
IG G V R R Q+ + VA+K ++ E + F++ E I+ + DH N+I+L
Sbjct: 57 IGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLS-EASIMGQFDHPNIIRL 115
Query: 195 EGLVT-SRMSCSLYLVFEYMEHDL--AGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRG 251
EG+VT R++ +V EYME+ L +H G +F+ Q+ ++ + G+ + G
Sbjct: 116 EGVVTRGRLAM---IVTEYMENGSLDTFLRTHDG-QFTIMQLVGMLRGVGAGMRYLSDLG 171
Query: 252 VLHRDIKGSNLLIDNNGILKIADFGLASFY--DPDQNQPLTSRVVTLWYRPPELLLGATY 309
+HRD+ N+L+D+N + K++DFGL+ DPD T + + + PE + T
Sbjct: 172 YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRT- 230
Query: 310 YGTAVDLWSTGCILAEL--YAGKPI--MPGRTEVEQLHKIFKL 348
+ +A D+WS G ++ E+ Y +P M R + + + ++L
Sbjct: 231 FSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRL 273
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 108/207 (52%), Gaps = 13/207 (6%)
Query: 130 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKV-RFDNLEPESVRFMAREIHILRRLDH 188
D FE L IG+G++ V + D KK+ A+K + + +E VR + +E+ I++ L+H
Sbjct: 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEH 74
Query: 189 INVIKLEGLVTSRMSCSLYLVFEYMEHDLAG-LASH--PGLKFSEAQVKCYMQQLLCGLD 245
++ L + + +++V + + L G L H + F E VK ++ +L+ LD
Sbjct: 75 PFLVNL--WYSFQDEEDMFMVVDLL---LGGDLRYHLQQNVHFKEETVKLFICELVMALD 129
Query: 246 HCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLL 305
+ ++ ++HRD+K N+L+D +G + I DF +A+ P + Q +T+ T Y PE+
Sbjct: 130 YLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAML-PRETQ-ITTMAGTKPYMAPEMFS 187
Query: 306 G--ATYYGTAVDLWSTGCILAELYAGK 330
Y AVD WS G EL G+
Sbjct: 188 SRKGAGYSFAVDWWSLGVTAYELLRGR 214
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 104/212 (49%), Gaps = 27/212 (12%)
Query: 132 FEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINV 191
F++++ IG G + V++A+ K +K+V+++N + E RE+ L +LDH+N+
Sbjct: 13 FKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAE------REVKALAKLDHVNI 66
Query: 192 IKLEGLVT---------------SRMSCSLYLVFEYMEHDLA--GLASHPGLKFSEAQVK 234
+ G S+ C L++ E+ + + G K +
Sbjct: 67 VHYNGCWDGFDYDPETSSKNSSRSKTKC-LFIQMEFCDKGTLEQWIEKRRGEKLDKVLAL 125
Query: 235 CYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVV 294
+Q+ G+D+ HS+ +++RD+K SN+ + + +KI DFGL + D + +
Sbjct: 126 ELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRXRSKG-- 183
Query: 295 TLWYRPPELLLGATYYGTAVDLWSTGCILAEL 326
TL Y PE + + YG VDL++ G ILAEL
Sbjct: 184 TLRYMSPE-QISSQDYGKEVDLYALGLILAEL 214
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 102/204 (50%), Gaps = 15/204 (7%)
Query: 132 FEKLDKIGQGTYSNV----YRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLD 187
+K+ +G+G + V Y + ++VA+K ++ D P+ +EI ILR L
Sbjct: 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADA-GPQHRSGWKQEIDILRTLY 91
Query: 188 HINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASH-PGLKFSEAQVKCYMQQLLCGLDH 246
H ++IK +G + SL LV EY+ L L + P AQ+ + QQ+ G+ +
Sbjct: 92 HEHIIKYKGCCEDAGAASLQLVMEYVP--LGSLRDYLPRHSIGLAQLLLFAQQICEGMAY 149
Query: 247 CHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSR----VVTLWYRPPE 302
H++ +HRD+ N+L+DN+ ++KI DFGLA P+ ++ R WY P
Sbjct: 150 LHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAV-PEGHEXYRVREDGDSPVFWYAPEC 208
Query: 303 LLLGATYYGTAVDLWSTGCILAEL 326
L YY A D+WS G L EL
Sbjct: 209 LKEYKFYY--ASDVWSFGVTLYEL 230
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 103/222 (46%), Gaps = 46/222 (20%)
Query: 130 DSFEKLDKIGQGTYSNV-----------YRARDLDQKKIVALKKVRFDNLEPESVRFMAR 178
D FE++ +G G++ V Y + LD++K+V LK++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEH----------TLN 91
Query: 179 EIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEY-----MEHDLAGLASHPGLKFSEAQV 233
E IL+ ++ + KLE + + + +LY+V EY M L + +F E
Sbjct: 92 EKRILQAVNFPFLTKLE--FSFKDNSNLYMVMEYAPGGEMFSHLRRIG-----RFXEPHA 144
Query: 234 KCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRV 293
+ Y Q++ ++ HS +++RD+K NL+ID G +K+ DFG A + + R
Sbjct: 145 RFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFA--------KRVKGRT 196
Query: 294 VTLW----YRPPELLLGATYYGTAVDLWSTGCILAELYAGKP 331
L Y PE++L Y AVD W+ G ++ E+ AG P
Sbjct: 197 WXLCGTPEYLAPEIILSKG-YNKAVDWWALGVLIYEMAAGYP 237
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 130/292 (44%), Gaps = 43/292 (14%)
Query: 129 ADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDH 188
+D+++ +++G+G +S V R A K + L + + RE I R+L H
Sbjct: 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 87
Query: 189 INVIKLEGLVTSRMSCSLYLVFEYME-----HDLAGLASHPGLKFSEAQVKCYMQQLLCG 243
N+++L + YLVF+ + D+ +SEA +QQ+L
Sbjct: 88 PNIVRLHDSIQEE--SFHYLVFDLVTGGELFEDIVAREF-----YSEADASHCIQQILES 140
Query: 244 LDHCHSRGVLHRDIKGSNLLIDNN---GILKIADFGLASFYDPDQNQPLTSRVVTLWYRP 300
+ +CHS G++HR++K NLL+ + +K+ADFGLA + + ++ T Y
Sbjct: 141 IAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYLS 198
Query: 301 PELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKS 360
PE +L Y VD+W+ G IL L G P E H+++ + + DY
Sbjct: 199 PE-VLKKDPYSKPVDIWACGVILYILLVGYPPFWD----EDQHRLYAQIKAGAYDY---- 249
Query: 361 KLPHATIFKPQQPYKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALR 412
P + E A +L++++L+++P R +A AL+
Sbjct: 250 ---------PSPEWDTVTPE--------AKSLIDSMLTVNPKKRITADQALK 284
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 105/207 (50%), Gaps = 15/207 (7%)
Query: 135 LDKI-GQGTYSNVYRAR-DLDQKK--IVALKKVRFDNLEPESVRFMAREIHILRRLDHIN 190
+DK+ G G + V R L KK VA+K ++ E + F+ E I+ + DH N
Sbjct: 49 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG-EASIMGQFDHPN 107
Query: 191 VIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHS 249
+I+LEG+VT S + +V EYME+ L +F+ Q+ ++ + G+ +
Sbjct: 108 IIRLEGVVTK--SKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD 165
Query: 250 RGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSR---VVTLWYRPPELLLG 306
G +HRD+ N+LI++N + K++DFGL+ + D T+R + W P +
Sbjct: 166 MGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEA--IA 223
Query: 307 ATYYGTAVDLWSTGCILAEL--YAGKP 331
+ +A D+WS G +L E+ Y +P
Sbjct: 224 YRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 99/218 (45%), Gaps = 22/218 (10%)
Query: 138 IGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINVIKLEGL 197
+G+G++ V+ A + A+K ++ D V M ++ + + E
Sbjct: 25 LGKGSFGKVFLAEFKKTNQFFAIKALKKD------VVLMDDDVECTMVEKRVLSLAWEHP 78
Query: 198 VTSRMSCS------LYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRG 251
+ M C+ L+ V EY+ KF ++ Y +++ GL HS+G
Sbjct: 79 FLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKG 138
Query: 252 VLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLW----YRPPELLLGA 307
+++RD+K N+L+D +G +KIADFG+ +N ++ Y PE+LLG
Sbjct: 139 IVYRDLKLDNILLDKDGHIKIADFGMCK-----ENMLGDAKTNXFCGTPDYIAPEILLGQ 193
Query: 308 TYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKI 345
Y +VD WS G +L E+ G+ G+ E E H I
Sbjct: 194 K-YNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSI 230
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 123/267 (46%), Gaps = 20/267 (7%)
Query: 130 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKV------RFDNLEPESVR-FMAREIHI 182
+++E + +G+G S V R K A+K + F E + +R +E+ I
Sbjct: 17 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 76
Query: 183 LRRLD-HINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLL 241
LR++ H N+I+L+ T + +LVF+ M+ + SE + + M+ LL
Sbjct: 77 LRKVSGHPNIIQLKD--TYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALL 134
Query: 242 CGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPP 301
+ H ++HRD+K N+L+D++ +K+ DFG + DP + L T Y P
Sbjct: 135 EVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDP--GEKLREVCGTPSYLAP 192
Query: 302 ELLLGATY-----YGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFK---LCGSPS 353
E++ + YG VD+WSTG I+ L AG P R ++ L I GSP
Sbjct: 193 EIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPE 252
Query: 354 EDYWRKSKLPHATIFKPQQPYKRCVAE 380
D + + + F QP KR AE
Sbjct: 253 WDDYSDTVKDLVSRFLVVQPQKRYTAE 279
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 105/207 (50%), Gaps = 15/207 (7%)
Query: 135 LDKI-GQGTYSNVYRAR-DLDQKK--IVALKKVRFDNLEPESVRFMAREIHILRRLDHIN 190
+DK+ G G + V R L KK VA+K ++ E + F+ E I+ + DH N
Sbjct: 49 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG-EASIMGQFDHPN 107
Query: 191 VIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHS 249
+I+LEG+VT S + +V EYME+ L +F+ Q+ ++ + G+ +
Sbjct: 108 IIRLEGVVTK--SKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD 165
Query: 250 RGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSR---VVTLWYRPPELLLG 306
G +HRD+ N+LI++N + K++DFGL+ + D T+R + W P +
Sbjct: 166 MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEA--IA 223
Query: 307 ATYYGTAVDLWSTGCILAEL--YAGKP 331
+ +A D+WS G +L E+ Y +P
Sbjct: 224 YRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 105/207 (50%), Gaps = 15/207 (7%)
Query: 135 LDKI-GQGTYSNVYRAR-DLDQKK--IVALKKVRFDNLEPESVRFMAREIHILRRLDHIN 190
+DK+ G G + V R L KK VA+K ++ E + F+ E I+ + DH N
Sbjct: 49 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG-EASIMGQFDHPN 107
Query: 191 VIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHS 249
+I+LEG+VT S + +V EYME+ L +F+ Q+ ++ + G+ +
Sbjct: 108 IIRLEGVVTK--SKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD 165
Query: 250 RGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSR---VVTLWYRPPELLLG 306
G +HRD+ N+LI++N + K++DFGL+ + D T+R + W P +
Sbjct: 166 MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEA--IA 223
Query: 307 ATYYGTAVDLWSTGCILAEL--YAGKP 331
+ +A D+WS G +L E+ Y +P
Sbjct: 224 YRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 105/207 (50%), Gaps = 15/207 (7%)
Query: 135 LDKI-GQGTYSNVYRAR-DLDQKK--IVALKKVRFDNLEPESVRFMAREIHILRRLDHIN 190
+DK+ G G + V R L KK VA+K ++ E + F+ E I+ + DH N
Sbjct: 49 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG-EASIMGQFDHPN 107
Query: 191 VIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHS 249
+I+LEG+VT S + +V EYME+ L +F+ Q+ ++ + G+ +
Sbjct: 108 IIRLEGVVTK--SKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD 165
Query: 250 RGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSR---VVTLWYRPPELLLG 306
G +HRD+ N+LI++N + K++DFGL+ + D T+R + W P +
Sbjct: 166 MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEA--IA 223
Query: 307 ATYYGTAVDLWSTGCILAEL--YAGKP 331
+ +A D+WS G +L E+ Y +P
Sbjct: 224 YRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 101/204 (49%), Gaps = 16/204 (7%)
Query: 135 LDKIGQGTYSNVYRAR----DLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHIN 190
L ++G+G + +V R + ++VA+KK++ E +R REI IL+ L H N
Sbjct: 16 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST--EEHLRDFEREIEILKSLQHDN 73
Query: 191 VIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHS 249
++K +G+ S +L L+ EY+ + L + ++ Y Q+ G+++ +
Sbjct: 74 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 133
Query: 250 RGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQ-----NQPLTSRVVTLWYRPPELL 304
+ +HR++ N+L++N +KI DFGL D+ +P S + WY P
Sbjct: 134 KRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPI--FWYAPES-- 189
Query: 305 LGATYYGTAVDLWSTGCILAELYA 328
L + + A D+WS G +L EL+
Sbjct: 190 LTESKFSVASDVWSFGVVLYELFT 213
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 105/207 (50%), Gaps = 15/207 (7%)
Query: 135 LDKI-GQGTYSNVYRAR-DLDQKK--IVALKKVRFDNLEPESVRFMAREIHILRRLDHIN 190
+DK+ G G + V R L KK VA+K ++ E + F+ E I+ + DH N
Sbjct: 37 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG-EASIMGQFDHPN 95
Query: 191 VIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHS 249
+I+LEG+VT S + +V EYME+ L +F+ Q+ ++ + G+ +
Sbjct: 96 IIRLEGVVTK--SKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD 153
Query: 250 RGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSR---VVTLWYRPPELLLG 306
G +HRD+ N+LI++N + K++DFGL+ + D T+R + W P +
Sbjct: 154 MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEA--IA 211
Query: 307 ATYYGTAVDLWSTGCILAEL--YAGKP 331
+ +A D+WS G +L E+ Y +P
Sbjct: 212 YRKFTSASDVWSYGIVLWEVMSYGERP 238
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 105/207 (50%), Gaps = 15/207 (7%)
Query: 135 LDKI-GQGTYSNVYRAR-DLDQKK--IVALKKVRFDNLEPESVRFMAREIHILRRLDHIN 190
+DK+ G G + V R L KK VA+K ++ E + F+ E I+ + DH N
Sbjct: 49 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG-EASIMGQFDHPN 107
Query: 191 VIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHS 249
+I+LEG+VT S + +V EYME+ L +F+ Q+ ++ + G+ +
Sbjct: 108 IIRLEGVVTK--SKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD 165
Query: 250 RGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSR---VVTLWYRPPELLLG 306
G +HRD+ N+LI++N + K++DFGL+ + D T+R + W P +
Sbjct: 166 MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEA--IA 223
Query: 307 ATYYGTAVDLWSTGCILAEL--YAGKP 331
+ +A D+WS G +L E+ Y +P
Sbjct: 224 YRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/206 (34%), Positives = 104/206 (50%), Gaps = 16/206 (7%)
Query: 129 ADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDH 188
+D FE ++G+G S VYR + +K ALK ++ ++ + VR EI +L RL H
Sbjct: 52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLK-KTVDKKIVR---TEIGVLLRLSH 107
Query: 189 INVIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHC 247
N+IKL+ + + SL V E + +L G +SE ++Q+L + +
Sbjct: 108 PNIIKLKEIFETPTEISL--VLELVTGGELFDRIVEKGY-YSERDAADAVKQILEAVAYL 164
Query: 248 HSRGVLHRDIKGSNLLIDN---NGILKIADFGLASFYDPDQNQPLTSRVV-TLWYRPPEL 303
H G++HRD+K NLL + LKIADFGL+ ++Q L V T Y PE+
Sbjct: 165 HENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIV---EHQVLMKTVCGTPGYCAPEI 221
Query: 304 LLGATYYGTAVDLWSTGCILAELYAG 329
L G YG VD+WS G I L G
Sbjct: 222 LRGCA-YGPEVDMWSVGIITYILLCG 246
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 105/207 (50%), Gaps = 15/207 (7%)
Query: 135 LDKI-GQGTYSNVYRAR-DLDQKK--IVALKKVRFDNLEPESVRFMAREIHILRRLDHIN 190
+DK+ G G + V R L KK VA+K ++ E + F+ E I+ + DH N
Sbjct: 47 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG-EASIMGQFDHPN 105
Query: 191 VIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHS 249
+I+LEG+VT S + +V EYME+ L +F+ Q+ ++ + G+ +
Sbjct: 106 IIRLEGVVTK--SKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD 163
Query: 250 RGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSR---VVTLWYRPPELLLG 306
G +HRD+ N+LI++N + K++DFGL+ + D T+R + W P +
Sbjct: 164 MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEA--IA 221
Query: 307 ATYYGTAVDLWSTGCILAEL--YAGKP 331
+ +A D+WS G +L E+ Y +P
Sbjct: 222 YRKFTSASDVWSYGIVLWEVMSYGERP 248
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 101/204 (49%), Gaps = 16/204 (7%)
Query: 135 LDKIGQGTYSNVYRAR----DLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHIN 190
L ++G+G + +V R + ++VA+KK++ E +R REI IL+ L H N
Sbjct: 18 LRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST--EEHLRDFEREIEILKSLQHDN 75
Query: 191 VIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHS 249
++K +G+ S +L L+ E++ + L + ++ Y Q+ G+++ +
Sbjct: 76 IVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICKGMEYLGT 135
Query: 250 RGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQ-----NQPLTSRVVTLWYRPPELL 304
+ +HRD+ N+L++N +KI DFGL D+ +P S + WY P
Sbjct: 136 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI--FWYAPES-- 191
Query: 305 LGATYYGTAVDLWSTGCILAELYA 328
L + + A D+WS G +L EL+
Sbjct: 192 LTESKFSVASDVWSFGVVLYELFT 215
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 104/207 (50%), Gaps = 15/207 (7%)
Query: 135 LDKI-GQGTYSNVYRAR-DLDQKK--IVALKKVRFDNLEPESVRFMAREIHILRRLDHIN 190
+DK+ G G + V R L KK VA+K ++ E + F+ E I+ + DH N
Sbjct: 49 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG-EASIMGQFDHPN 107
Query: 191 VIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHS 249
+I+LEG+VT S + +V EYME+ L +F+ Q+ ++ + G+ +
Sbjct: 108 IIRLEGVVTK--SKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD 165
Query: 250 RGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSR---VVTLWYRPPELLLG 306
G +HRD+ N+LI++N + K++DFGL + D T+R + W P +
Sbjct: 166 MGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEA--IA 223
Query: 307 ATYYGTAVDLWSTGCILAEL--YAGKP 331
+ +A D+WS G +L E+ Y +P
Sbjct: 224 YRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 105/207 (50%), Gaps = 15/207 (7%)
Query: 135 LDKI-GQGTYSNVYRAR-DLDQKK--IVALKKVRFDNLEPESVRFMAREIHILRRLDHIN 190
+DK+ G G + V R L KK VA+K ++ E + F+ E I+ + DH N
Sbjct: 20 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG-EASIMGQFDHPN 78
Query: 191 VIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHS 249
+I+LEG+VT S + +V EYME+ L +F+ Q+ ++ + G+ +
Sbjct: 79 IIRLEGVVTK--SKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD 136
Query: 250 RGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSR---VVTLWYRPPELLLG 306
G +HRD+ N+LI++N + K++DFGL+ + D T+R + W P +
Sbjct: 137 MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEA--IA 194
Query: 307 ATYYGTAVDLWSTGCILAEL--YAGKP 331
+ +A D+WS G +L E+ Y +P
Sbjct: 195 YRKFTSASDVWSYGIVLWEVMSYGERP 221
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 101/212 (47%), Gaps = 13/212 (6%)
Query: 178 REIHILRRLD-HINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCY 236
+E+ ILR++ H N+I+L+ T + +LVF+ M+ + SE + +
Sbjct: 59 KEVDILRKVSGHPNIIQLKD--TYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKI 116
Query: 237 MQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTL 296
M+ LL + H ++HRD+K N+L+D++ +K+ DFG + DP + L T
Sbjct: 117 MRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDP--GEKLREVCGTP 174
Query: 297 WYRPPELLLGATY-----YGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFK---L 348
Y PE++ + YG VD+WSTG I+ L AG P R ++ L I
Sbjct: 175 SYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQ 234
Query: 349 CGSPSEDYWRKSKLPHATIFKPQQPYKRCVAE 380
GSP D + + + F QP KR AE
Sbjct: 235 FGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAE 266
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 86/331 (25%), Positives = 139/331 (41%), Gaps = 48/331 (14%)
Query: 127 RRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRL 186
R D ++ +++G+G +S V R + A K + L + + RE I R L
Sbjct: 28 RFTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLL 87
Query: 187 DHINVIKLEGLVTSRMSCSLYLVFEYME-----HDLAGLASHPGLKFSEAQVKCYMQQLL 241
H N+++L ++ YLVF+ + D+ +SEA + Q+L
Sbjct: 88 KHPNIVRLHDSISEEGF--HYLVFDLVTGGELFEDIVAREY-----YSEADASHCIHQIL 140
Query: 242 CGLDHCHSRGVLHRDIKGSNLLIDNN---GILKIADFGLASFYDPDQNQPLTSRVVTLWY 298
++H H ++HRD+K NLL+ + +K+ADFGLA +Q Q T Y
Sbjct: 141 ESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQ-QAWFGFAGTPGY 199
Query: 299 RPPELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWR 358
PE+L YG VD+W+ G IL L G P E HK+++ + + D+
Sbjct: 200 LSPEVLRKDP-YGKPVDIWACGVILYILLVGYPPFWD----EDQHKLYQQIKAGAYDF-- 252
Query: 359 KSKLPHATIFKPQQPYKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALRSEFFTM 418
P + E A L+ +L+I+PA R +A AL+
Sbjct: 253 -----------PSPEWDTVTPE--------AKNLINQMLTINPAKRITADQALK------ 287
Query: 419 KPLPCDPSSLPKYPPSKEFDAKIRDEEARRQ 449
P C S++ +E +R ARR+
Sbjct: 288 HPWVCQRSTVASMMHRQETVECLRKFNARRK 318
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 107/231 (46%), Gaps = 26/231 (11%)
Query: 178 REIHILRRLD-HINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCY 236
+EI L+ + H N++KL + ++ +LV E + FSE +
Sbjct: 54 KEITALKLCEGHPNIVKLHEVFHDQLHT--FLVMELLNGGELFERIKKKKHFSETEASYI 111
Query: 237 MQQLLCGLDHCHSRGVLHRDIKGSNLLI---DNNGILKIADFGLASFYDPDQNQPLTSRV 293
M++L+ + H H GV+HRD+K NLL ++N +KI DFG A PD NQPL +
Sbjct: 112 MRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPD-NQPLKTPC 170
Query: 294 VTLWYRPPELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPS 353
TL Y PE LL Y + DLWS G IL + +G+ +P ++ L C S
Sbjct: 171 FTLHYAAPE-LLNQNGYDESCDLWSLGVILYTMLSGQ--VPFQSHDRSL-----TCTSAV 222
Query: 354 EDYWRKSKLPHATIFKPQQPYKRCVAETFKDFPAPALALMETLLSIDPADR 404
E + K ++ E +K+ A L++ LL++DP R
Sbjct: 223 E-----------IMKKIKKGDFSFEGEAWKNVSQEAKDLIQGLLTVDPNKR 262
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 100/207 (48%), Gaps = 31/207 (14%)
Query: 138 IGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINVIKLEGL 197
IG+G + VY R D K+ A+K L+ + ++ E L ++++
Sbjct: 197 IGRGGFGEVYGCRKADTGKMYAMK-----CLDKKRIKMKQGETLALNERIMLSLV----- 246
Query: 198 VTSRMSCSLYLVFEYMEH---------------DLAGLASHPGLKFSEAQVKCYMQQLLC 242
S C + Y H DL S G+ FSEA ++ Y +++
Sbjct: 247 --STGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGV-FSEADMRFYAAEIIL 303
Query: 243 GLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPE 302
GL+H H+R V++RD+K +N+L+D +G ++I+D GLA D + +P S V T Y PE
Sbjct: 304 GLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLAC--DFSKKKPHAS-VGTHGYMAPE 360
Query: 303 LLLGATYYGTAVDLWSTGCILAELYAG 329
+L Y ++ D +S GC+L +L G
Sbjct: 361 VLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 100/207 (48%), Gaps = 31/207 (14%)
Query: 138 IGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINVIKLEGL 197
IG+G + VY R D K+ A+K L+ + ++ E L ++++
Sbjct: 196 IGRGGFGEVYGCRKADTGKMYAMK-----CLDKKRIKMKQGETLALNERIMLSLV----- 245
Query: 198 VTSRMSCSLYLVFEYMEH---------------DLAGLASHPGLKFSEAQVKCYMQQLLC 242
S C + Y H DL S G+ FSEA ++ Y +++
Sbjct: 246 --STGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGV-FSEADMRFYAAEIIL 302
Query: 243 GLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPE 302
GL+H H+R V++RD+K +N+L+D +G ++I+D GLA D + +P S V T Y PE
Sbjct: 303 GLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLAC--DFSKKKPHAS-VGTHGYMAPE 359
Query: 303 LLLGATYYGTAVDLWSTGCILAELYAG 329
+L Y ++ D +S GC+L +L G
Sbjct: 360 VLQKGVAYDSSADWFSLGCMLFKLLRG 386
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 128/265 (48%), Gaps = 44/265 (16%)
Query: 125 VPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILR 184
VPR ++ + ++++G G + V+ K VA+K ++ ++ P++ F+A E ++++
Sbjct: 18 VPR--ETLKLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDA--FLA-EANLMK 71
Query: 185 RLDHINVIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHP-GLKFSEAQVKCYMQQLLC 242
+L H +++L +VT +Y++ EYME+ L P G+K + ++ Q+
Sbjct: 72 QLQHQRLVRLYAVVTQE---PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 128
Query: 243 GLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPE 302
G+ R +HRD++ +N+L+ + KIADFGLA + ++ + + PE
Sbjct: 129 GMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPE 188
Query: 303 LLLGATYYGTAV---DLWSTGCILAELYA-GKPIMPGRT--EV----------------- 339
A YGT D+WS G +L E+ G+ PG T EV
Sbjct: 189 ----AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCP 244
Query: 340 EQLHKIFKLCGS------PSEDYWR 358
E+L+++ +LC P+ DY R
Sbjct: 245 EELYQLMRLCWKERPEDRPTFDYLR 269
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 128/265 (48%), Gaps = 44/265 (16%)
Query: 125 VPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILR 184
VPR ++ + ++++G G + V+ K VA+K ++ ++ P++ F+A E ++++
Sbjct: 16 VPR--ETLKLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDA--FLA-EANLMK 69
Query: 185 RLDHINVIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHP-GLKFSEAQVKCYMQQLLC 242
+L H +++L +VT +Y++ EYME+ L P G+K + ++ Q+
Sbjct: 70 QLQHQRLVRLYAVVTQE---PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 126
Query: 243 GLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPE 302
G+ R +HRD++ +N+L+ + KIADFGLA + ++ + + PE
Sbjct: 127 GMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPE 186
Query: 303 LLLGATYYGTAV---DLWSTGCILAELYA-GKPIMPGRT--EV----------------- 339
A YGT D+WS G +L E+ G+ PG T EV
Sbjct: 187 ----AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCP 242
Query: 340 EQLHKIFKLCGS------PSEDYWR 358
E+L+++ +LC P+ DY R
Sbjct: 243 EELYQLMRLCWKERPEDRPTFDYLR 267
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 129/297 (43%), Gaps = 39/297 (13%)
Query: 136 DKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINVIKLE 195
+ IG+G++ V A + A KK+ E V +EI I++ LDH N+I+L
Sbjct: 32 NTIGRGSWGEVKIAVQKGTRIRRAAKKI--PKYFVEDVDRFKQEIEIMKSLDHPNIIRLY 89
Query: 196 GLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVLH 254
T + +YLV E +L H + F E+ M+ +L + +CH V H
Sbjct: 90 E--TFEDNTDIYLVMELCTGGELFERVVHKRV-FRESDAARIMKDVLSAVAYCHKLNVAH 146
Query: 255 RDIKGSNLLIDN---NGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGATYYG 311
RD+K N L + LK+ DFGLA+ + P + + ++V T +Y P++L G YG
Sbjct: 147 RDLKPENFLFLTDSPDSPLKLIDFGLAARFKP--GKMMRTKVGTPYYVSPQVLEGL--YG 202
Query: 312 TAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSKLPHATIFKPQ 371
D WS G ++ L G P T+ E + KI + + E W PQ
Sbjct: 203 PECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDWLN--------VSPQ 254
Query: 372 QPYKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALRSEFFTMKPLPCDPSSL 428
A +L+ LL+ P R ++ AL E+F K L P +L
Sbjct: 255 -----------------AESLIRRLLTKSPKQRITSLQALEHEWFE-KQLSSSPRNL 293
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 100/207 (48%), Gaps = 31/207 (14%)
Query: 138 IGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINVIKLEGL 197
IG+G + VY R D K+ A+K L+ + ++ E L ++++
Sbjct: 197 IGRGGFGEVYGCRKADTGKMYAMK-----CLDKKRIKMKQGETLALNERIMLSLV----- 246
Query: 198 VTSRMSCSLYLVFEYMEH---------------DLAGLASHPGLKFSEAQVKCYMQQLLC 242
S C + Y H DL S G+ FSEA ++ Y +++
Sbjct: 247 --STGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGV-FSEADMRFYAAEIIL 303
Query: 243 GLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPE 302
GL+H H+R V++RD+K +N+L+D +G ++I+D GLA D + +P S V T Y PE
Sbjct: 304 GLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLAC--DFSKKKPHAS-VGTHGYMAPE 360
Query: 303 LLLGATYYGTAVDLWSTGCILAELYAG 329
+L Y ++ D +S GC+L +L G
Sbjct: 361 VLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 100/207 (48%), Gaps = 31/207 (14%)
Query: 138 IGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINVIKLEGL 197
IG+G + VY R D K+ A+K L+ + ++ E L ++++
Sbjct: 197 IGRGGFGEVYGCRKADTGKMYAMK-----CLDKKRIKMKQGETLALNERIMLSLV----- 246
Query: 198 VTSRMSCSLYLVFEYMEH---------------DLAGLASHPGLKFSEAQVKCYMQQLLC 242
S C + Y H DL S G+ FSEA ++ Y +++
Sbjct: 247 --STGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGV-FSEADMRFYAAEIIL 303
Query: 243 GLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPE 302
GL+H H+R V++RD+K +N+L+D +G ++I+D GLA D + +P S V T Y PE
Sbjct: 304 GLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLAC--DFSKKKPHAS-VGTHGYMAPE 360
Query: 303 LLLGATYYGTAVDLWSTGCILAELYAG 329
+L Y ++ D +S GC+L +L G
Sbjct: 361 VLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 97/196 (49%), Gaps = 7/196 (3%)
Query: 136 DKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEP-ESVRFMAREIHILRRLDHINVIKL 194
D +G GT+ V VA+K + + + V + REI L+ H ++IKL
Sbjct: 17 DTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKL 76
Query: 195 EGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVL 253
++++ ++V EY+ +L G + E + + QQ+L +D+CH V+
Sbjct: 77 YQVIST--PTDFFMVMEYVSGGELFDYICKHG-RVEEMEARRLFQQILSAVDYCHRHMVV 133
Query: 254 HRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGATYYGTA 313
HRD+K N+L+D + KIADFGL++ + L + + Y PE++ G Y G
Sbjct: 134 HRDLKPENVLLDAHMNAKIADFGLSNMM--SDGEFLRTSCGSPNYAAPEVISGRLYAGPE 191
Query: 314 VDLWSTGCILAELYAG 329
VD+WS G IL L G
Sbjct: 192 VDIWSCGVILYALLCG 207
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 128/265 (48%), Gaps = 44/265 (16%)
Query: 125 VPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILR 184
VPR ++ + ++++G G + V+ K VA+K ++ ++ P++ F+A E ++++
Sbjct: 19 VPR--ETLKLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDA--FLA-EANLMK 72
Query: 185 RLDHINVIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHP-GLKFSEAQVKCYMQQLLC 242
+L H +++L +VT +Y++ EYME+ L P G+K + ++ Q+
Sbjct: 73 QLQHQRLVRLYAVVTQE---PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 129
Query: 243 GLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPE 302
G+ R +HRD++ +N+L+ + KIADFGLA + ++ + + PE
Sbjct: 130 GMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPE 189
Query: 303 LLLGATYYGTAV---DLWSTGCILAELYA-GKPIMPGRT--EV----------------- 339
A YGT D+WS G +L E+ G+ PG T EV
Sbjct: 190 ----AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCP 245
Query: 340 EQLHKIFKLCGS------PSEDYWR 358
E+L+++ +LC P+ DY R
Sbjct: 246 EELYQLMRLCWKERPEDRPTFDYLR 270
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 110/229 (48%), Gaps = 17/229 (7%)
Query: 130 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHI 189
D +E + ++G G + VY+A++ + + A K + D E + EI IL DH
Sbjct: 37 DFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVI--DTKSEEELEDYMVEIDILASCDHP 94
Query: 190 NVIKLEGLVTSRMSCSLYLVFEYMEH---DLAGLASHPGLKFSEAQVKCYMQQLLCGLDH 246
N++KL L +L+++ E+ D L L S+ QV C +Q L L++
Sbjct: 95 NIVKL--LDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVC--KQTLDALNY 150
Query: 247 CHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLG 306
H ++HRD+K N+L +G +K+ADFG+++ + Q S + T ++ PE+++
Sbjct: 151 LHDNKIIHRDLKAGNILFTLDGDIKLADFGVSA-KNTRTIQRRDSFIGTPYWMAPEVVMC 209
Query: 307 ATY----YGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGS 351
T Y D+WS G L E+ I P E+ + + K+ S
Sbjct: 210 ETSKDRPYDYKADVWSLGITLIEM---AEIEPPHHELNPMRVLLKIAKS 255
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 128/265 (48%), Gaps = 44/265 (16%)
Query: 125 VPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILR 184
VPR ++ + ++++G G + V+ K VA+K ++ ++ P++ F+A E ++++
Sbjct: 20 VPR--ETLKLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDA--FLA-EANLMK 73
Query: 185 RLDHINVIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHP-GLKFSEAQVKCYMQQLLC 242
+L H +++L +VT +Y++ EYME+ L P G+K + ++ Q+
Sbjct: 74 QLQHQRLVRLYAVVTQE---PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 130
Query: 243 GLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPE 302
G+ R +HRD++ +N+L+ + KIADFGLA + ++ + + PE
Sbjct: 131 GMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPE 190
Query: 303 LLLGATYYGTAV---DLWSTGCILAELYA-GKPIMPGRT--EV----------------- 339
A YGT D+WS G +L E+ G+ PG T EV
Sbjct: 191 ----AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCP 246
Query: 340 EQLHKIFKLCGS------PSEDYWR 358
E+L+++ +LC P+ DY R
Sbjct: 247 EELYQLMRLCWKERPEDRPTFDYLR 271
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 110/229 (48%), Gaps = 17/229 (7%)
Query: 130 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHI 189
D +E + ++G G + VY+A++ + + A K + D E + EI IL DH
Sbjct: 37 DFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVI--DTKSEEELEDYMVEIDILASCDHP 94
Query: 190 NVIKLEGLVTSRMSCSLYLVFEYMEH---DLAGLASHPGLKFSEAQVKCYMQQLLCGLDH 246
N++KL L +L+++ E+ D L L S+ QV C +Q L L++
Sbjct: 95 NIVKL--LDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVC--KQTLDALNY 150
Query: 247 CHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLG 306
H ++HRD+K N+L +G +K+ADFG+++ + Q S + T ++ PE+++
Sbjct: 151 LHDNKIIHRDLKAGNILFTLDGDIKLADFGVSA-KNTRXIQRRDSFIGTPYWMAPEVVMC 209
Query: 307 ATY----YGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGS 351
T Y D+WS G L E+ I P E+ + + K+ S
Sbjct: 210 ETSKDRPYDYKADVWSLGITLIEM---AEIEPPHHELNPMRVLLKIAKS 255
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 129/297 (43%), Gaps = 39/297 (13%)
Query: 136 DKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINVIKLE 195
+ IG+G++ V A + A KK+ E V +EI I++ LDH N+I+L
Sbjct: 15 NTIGRGSWGEVKIAVQKGTRIRRAAKKI--PKYFVEDVDRFKQEIEIMKSLDHPNIIRLY 72
Query: 196 GLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVLH 254
T + +YLV E +L H + F E+ M+ +L + +CH V H
Sbjct: 73 E--TFEDNTDIYLVMELCTGGELFERVVHKRV-FRESDAARIMKDVLSAVAYCHKLNVAH 129
Query: 255 RDIKGSNLLIDN---NGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGATYYG 311
RD+K N L + LK+ DFGLA+ + P + + ++V T +Y P++L G YG
Sbjct: 130 RDLKPENFLFLTDSPDSPLKLIDFGLAARFKP--GKMMRTKVGTPYYVSPQVLEGL--YG 185
Query: 312 TAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSKLPHATIFKPQ 371
D WS G ++ L G P T+ E + KI + + E W PQ
Sbjct: 186 PECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDWLN--------VSPQ 237
Query: 372 QPYKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALRSEFFTMKPLPCDPSSL 428
A +L+ LL+ P R ++ AL E+F K L P +L
Sbjct: 238 -----------------AESLIRRLLTKSPKQRITSLQALEHEWFE-KQLSSSPRNL 276
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 128/265 (48%), Gaps = 44/265 (16%)
Query: 125 VPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILR 184
VPR ++ + ++++G G + V+ K VA+K ++ ++ P++ F+A E ++++
Sbjct: 10 VPR--ETLKLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDA--FLA-EANLMK 63
Query: 185 RLDHINVIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHP-GLKFSEAQVKCYMQQLLC 242
+L H +++L +VT +Y++ EYME+ L P G+K + ++ Q+
Sbjct: 64 QLQHQRLVRLYAVVTQE---PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 120
Query: 243 GLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPE 302
G+ R +HRD++ +N+L+ + KIADFGLA + ++ + + PE
Sbjct: 121 GMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPE 180
Query: 303 LLLGATYYGTAV---DLWSTGCILAELYA-GKPIMPGRT--EV----------------- 339
A YGT D+WS G +L E+ G+ PG T EV
Sbjct: 181 ----AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCP 236
Query: 340 EQLHKIFKLCGS------PSEDYWR 358
E+L+++ +LC P+ DY R
Sbjct: 237 EELYQLMRLCWKERPEDRPTFDYLR 261
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 114/222 (51%), Gaps = 19/222 (8%)
Query: 119 EAIQGWVPRRADSFEKLDK-IGQGTYSNVYRAR---DLDQKKIVALKKVRFDNLEPESVR 174
EA++ + S+ K+++ IG G + V R R ++ VA+K ++ E +
Sbjct: 4 EAVREFAKEIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRRE 63
Query: 175 FMAREIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGL---KFSEA 231
F++ E I+ + +H N+I+LEG+VT+ M + ++ E+ME+ L S L +F+
Sbjct: 64 FLS-EASIMGQFEHPNIIRLEGVVTNSMP--VMILTEFMEN--GALDSFLRLNDGQFTVI 118
Query: 232 QVKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFY-----DPDQN 286
Q+ ++ + G+ + +HRD+ N+L+++N + K++DFGL+ F DP +
Sbjct: 119 QLVGMLRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTET 178
Query: 287 QPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYA 328
L ++ W P + + +A D WS G ++ E+ +
Sbjct: 179 SSLGGKIPIRWTAPEAIAF--RKFTSASDAWSYGIVMWEVMS 218
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 128/265 (48%), Gaps = 44/265 (16%)
Query: 125 VPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILR 184
VPR ++ + ++++G G + V+ K VA+K ++ ++ P++ F+A E ++++
Sbjct: 12 VPR--ETLKLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDA--FLA-EANLMK 65
Query: 185 RLDHINVIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHP-GLKFSEAQVKCYMQQLLC 242
+L H +++L +VT +Y++ EYME+ L P G+K + ++ Q+
Sbjct: 66 QLQHQRLVRLYAVVTQE---PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 122
Query: 243 GLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPE 302
G+ R +HRD++ +N+L+ + KIADFGLA + ++ + + PE
Sbjct: 123 GMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPE 182
Query: 303 LLLGATYYGTAV---DLWSTGCILAELYA-GKPIMPGRT--EV----------------- 339
A YGT D+WS G +L E+ G+ PG T EV
Sbjct: 183 ----AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCP 238
Query: 340 EQLHKIFKLCGS------PSEDYWR 358
E+L+++ +LC P+ DY R
Sbjct: 239 EELYQLMRLCWKERPEDRPTFDYLR 263
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 128/265 (48%), Gaps = 44/265 (16%)
Query: 125 VPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILR 184
VPR ++ + ++++G G + V+ K VA+K ++ ++ P++ F+A E ++++
Sbjct: 11 VPR--ETLKLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDA--FLA-EANLMK 64
Query: 185 RLDHINVIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHP-GLKFSEAQVKCYMQQLLC 242
+L H +++L +VT +Y++ EYME+ L P G+K + ++ Q+
Sbjct: 65 QLQHQRLVRLYAVVTQE---PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 121
Query: 243 GLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPE 302
G+ R +HRD++ +N+L+ + KIADFGLA + ++ + + PE
Sbjct: 122 GMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPE 181
Query: 303 LLLGATYYGTAV---DLWSTGCILAELYA-GKPIMPGRT--EV----------------- 339
A YGT D+WS G +L E+ G+ PG T EV
Sbjct: 182 ----AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCP 237
Query: 340 EQLHKIFKLCGS------PSEDYWR 358
E+L+++ +LC P+ DY R
Sbjct: 238 EELYQLMRLCWKERPEDRPTFDYLR 262
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 128/265 (48%), Gaps = 44/265 (16%)
Query: 125 VPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILR 184
VPR ++ + ++++G G + V+ K VA+K ++ ++ P++ F+A E ++++
Sbjct: 15 VPR--ETLKLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDA--FLA-EANLMK 68
Query: 185 RLDHINVIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHP-GLKFSEAQVKCYMQQLLC 242
+L H +++L +VT +Y++ EYME+ L P G+K + ++ Q+
Sbjct: 69 QLQHQRLVRLYAVVTQE---PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 125
Query: 243 GLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPE 302
G+ R +HRD++ +N+L+ + KIADFGLA + ++ + + PE
Sbjct: 126 GMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPE 185
Query: 303 LLLGATYYGTAV---DLWSTGCILAELYA-GKPIMPGRT--EV----------------- 339
A YGT D+WS G +L E+ G+ PG T EV
Sbjct: 186 ----AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCP 241
Query: 340 EQLHKIFKLCGS------PSEDYWR 358
E+L+++ +LC P+ DY R
Sbjct: 242 EELYQLMRLCWKERPEDRPTFDYLR 266
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 131/294 (44%), Gaps = 43/294 (14%)
Query: 127 RRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRL 186
+ +D+++ +++G+G +S V R A K + L + + RE I R+L
Sbjct: 3 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL 62
Query: 187 DHINVIKLEGLVTSRMSCSLYLVFEYME-----HDLAGLASHPGLKFSEAQVKCYMQQLL 241
H N+++L + YLVF+ + D+ +SEA +QQ+L
Sbjct: 63 QHPNIVRLHDSIQEE--SFHYLVFDLVTGGELFEDIVAREF-----YSEADASHCIQQIL 115
Query: 242 CGLDHCHSRGVLHRDIKGSNLLIDNN---GILKIADFGLASFYDPDQNQPLTSRVVTLWY 298
+ +CHS G++HR++K NLL+ + +K+ADFGLA + + ++ T Y
Sbjct: 116 ESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGY 173
Query: 299 RPPELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWR 358
PE +L Y VD+W+ G IL L G P E H+++ + + DY
Sbjct: 174 LSPE-VLKKDPYSKPVDIWACGVILYILLVGYPPFWD----EDQHRLYAQIKAGAYDY-- 226
Query: 359 KSKLPHATIFKPQQPYKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALR 412
P + E A +L++++L+++P R +A AL+
Sbjct: 227 -----------PSPEWDTVTPE--------AKSLIDSMLTVNPKKRITADQALK 261
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 128/265 (48%), Gaps = 44/265 (16%)
Query: 125 VPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILR 184
VPR ++ + ++++G G + V+ K VA+K ++ ++ P++ F+A E ++++
Sbjct: 16 VPR--ETLKLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDA--FLA-EANLMK 69
Query: 185 RLDHINVIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHP-GLKFSEAQVKCYMQQLLC 242
+L H +++L +VT +Y++ EYME+ L P G+K + ++ Q+
Sbjct: 70 QLQHQRLVRLYAVVTQE---PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 126
Query: 243 GLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPE 302
G+ R +HRD++ +N+L+ + KIADFGLA + ++ + + PE
Sbjct: 127 GMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPE 186
Query: 303 LLLGATYYGTAV---DLWSTGCILAELYA-GKPIMPGRT--EV----------------- 339
A YGT D+WS G +L E+ G+ PG T EV
Sbjct: 187 ----AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCP 242
Query: 340 EQLHKIFKLCGS------PSEDYWR 358
E+L+++ +LC P+ DY R
Sbjct: 243 EELYQLMRLCWKERPEDRPTFDYLR 267
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 104/240 (43%), Gaps = 36/240 (15%)
Query: 179 EIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQ 238
EI IL++L+H +IK++ + Y+V E ME + EA K Y
Sbjct: 65 EIEILKKLNHPCIIKIKNFFDAE---DYYIVLELMEGGELFDKVVGNKRLKEATCKLYFY 121
Query: 239 QLLCGLDHCHSRGVLHRDIKGSNLLI---DNNGILKIADFGLASFYDPDQNQPLTSRVVT 295
Q+L + + H G++HRD+K N+L+ + + ++KI DFG + + + + T
Sbjct: 122 QMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCGT 179
Query: 296 LWYRPPELL--LGATYYGTAVDLWSTGCILAELYAGK-PIMPGRTEVEQLHKIFKLCGSP 352
Y PE+L +G Y AVD WS G IL +G P RT+V +I
Sbjct: 180 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQI------T 233
Query: 353 SEDYWRKSKLPHATIFKPQQPYKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALR 412
S Y + E + + AL L++ LL +DP R + ALR
Sbjct: 234 SGKY-------------------NFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR 274
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 130/292 (44%), Gaps = 43/292 (14%)
Query: 129 ADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDH 188
+D+++ +++G+G +S V R A K + L + + RE I R+L H
Sbjct: 4 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 63
Query: 189 INVIKLEGLVTSRMSCSLYLVFEYME-----HDLAGLASHPGLKFSEAQVKCYMQQLLCG 243
N+++L + YLVF+ + D+ +SEA +QQ+L
Sbjct: 64 PNIVRLHDSIQEESF--HYLVFDLVTGGELFEDIVAREF-----YSEADASHCIQQILES 116
Query: 244 LDHCHSRGVLHRDIKGSNLLIDNN---GILKIADFGLASFYDPDQNQPLTSRVVTLWYRP 300
+ +CHS G++HR++K NLL+ + +K+ADFGLA + + ++ T Y
Sbjct: 117 IAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYLS 174
Query: 301 PELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKS 360
PE +L Y VD+W+ G IL L G P E H+++ + + DY
Sbjct: 175 PE-VLKKDPYSKPVDIWACGVILYILLVGYPPFWD----EDQHRLYAQIKAGAYDY---- 225
Query: 361 KLPHATIFKPQQPYKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALR 412
P + E A +L++++L+++P R +A AL+
Sbjct: 226 ---------PSPEWDTVTPE--------AKSLIDSMLTVNPKKRITADQALK 260
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 96/196 (48%), Gaps = 7/196 (3%)
Query: 136 DKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEP-ESVRFMAREIHILRRLDHINVIKL 194
D +G GT+ V VA+K + + + V + REI L+ H ++IKL
Sbjct: 17 DTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKL 76
Query: 195 EGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVL 253
++++ ++V EY+ +L G + E + + QQ+L +D+CH V+
Sbjct: 77 YQVIST--PTDFFMVMEYVSGGELFDYICKHG-RVEEMEARRLFQQILSAVDYCHRHMVV 133
Query: 254 HRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGATYYGTA 313
HRD+K N+L+D + KIADFGL++ + L + Y PE++ G Y G
Sbjct: 134 HRDLKPENVLLDAHMNAKIADFGLSNMM--SDGEFLRDSCGSPNYAAPEVISGRLYAGPE 191
Query: 314 VDLWSTGCILAELYAG 329
VD+WS G IL L G
Sbjct: 192 VDIWSCGVILYALLCG 207
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 104/217 (47%), Gaps = 14/217 (6%)
Query: 124 WVPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHIL 183
W R D +E + IG G + V A +K+ VA+K++ + + S+ + +EI +
Sbjct: 10 WSINR-DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQT-SMDELLKEIQAM 67
Query: 184 RRLDHINVIKLEGLVTSRMSCSLYL-------VFEYMEHDLAGLASHPGLKFSEAQVKCY 236
+ H N++ + L + V + ++H +A H E+ +
Sbjct: 68 SQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAK-GEHKSGVLDESTIATI 126
Query: 237 MQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFY----DPDQNQPLTSR 292
++++L GL++ H G +HRD+K N+L+ +G ++IADFG+++F D +N+ +
Sbjct: 127 LREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTF 186
Query: 293 VVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYAG 329
V T + PE++ Y D+WS G EL G
Sbjct: 187 VGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATG 223
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 130/292 (44%), Gaps = 43/292 (14%)
Query: 129 ADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDH 188
+D+++ +++G+G +S V R A K + L + + RE I R+L H
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 189 INVIKLEGLVTSRMSCSLYLVFEYME-----HDLAGLASHPGLKFSEAQVKCYMQQLLCG 243
N+++L + YLVF+ + D+ +SEA +QQ+L
Sbjct: 65 PNIVRLHDSIQEE--SFHYLVFDLVTGGELFEDIVAREF-----YSEADASHCIQQILES 117
Query: 244 LDHCHSRGVLHRDIKGSNLLIDNN---GILKIADFGLASFYDPDQNQPLTSRVVTLWYRP 300
+ +CHS G++HR++K NLL+ + +K+ADFGLA + + ++ T Y
Sbjct: 118 IAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYLS 175
Query: 301 PELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKS 360
PE +L Y VD+W+ G IL L G P E H+++ + + DY
Sbjct: 176 PE-VLKKDPYSKPVDIWACGVILYILLVGYPPFWD----EDQHRLYAQIKAGAYDY---- 226
Query: 361 KLPHATIFKPQQPYKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALR 412
P + E A +L++++L+++P R +A AL+
Sbjct: 227 ---------PSPEWDTVTPE--------AKSLIDSMLTVNPKKRITADQALK 261
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 104/240 (43%), Gaps = 36/240 (15%)
Query: 179 EIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQ 238
EI IL++L+H +IK++ + Y+V E ME + EA K Y
Sbjct: 71 EIEILKKLNHPCIIKIKNFFDAE---DYYIVLELMEGGELFDKVVGNKRLKEATCKLYFY 127
Query: 239 QLLCGLDHCHSRGVLHRDIKGSNLLI---DNNGILKIADFGLASFYDPDQNQPLTSRVVT 295
Q+L + + H G++HRD+K N+L+ + + ++KI DFG + + + + T
Sbjct: 128 QMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCGT 185
Query: 296 LWYRPPELL--LGATYYGTAVDLWSTGCILAELYAGK-PIMPGRTEVEQLHKIFKLCGSP 352
Y PE+L +G Y AVD WS G IL +G P RT+V +I
Sbjct: 186 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQI------T 239
Query: 353 SEDYWRKSKLPHATIFKPQQPYKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALR 412
S Y + E + + AL L++ LL +DP R + ALR
Sbjct: 240 SGKY-------------------NFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR 280
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 128/265 (48%), Gaps = 44/265 (16%)
Query: 125 VPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILR 184
VPR ++ + ++++G G + V+ K VA+K ++ ++ P++ F+A E ++++
Sbjct: 10 VPR--ETLKLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDA--FLA-EANLMK 63
Query: 185 RLDHINVIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHP-GLKFSEAQVKCYMQQLLC 242
+L H +++L +VT +Y++ EYME+ L P G+K + ++ Q+
Sbjct: 64 QLQHQRLVRLYAVVTQE---PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 120
Query: 243 GLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPE 302
G+ R +HRD++ +N+L+ + KIADFGLA + ++ + + PE
Sbjct: 121 GMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPE 180
Query: 303 LLLGATYYGTAV---DLWSTGCILAELYA-GKPIMPGRT--EV----------------- 339
A YGT D+WS G +L E+ G+ PG T EV
Sbjct: 181 ----AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCP 236
Query: 340 EQLHKIFKLCGS------PSEDYWR 358
E+L+++ +LC P+ DY R
Sbjct: 237 EELYQLMRLCWKERPEDRPTFDYLR 261
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 109/228 (47%), Gaps = 27/228 (11%)
Query: 123 GWVPRRA---------DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKV---RFDNLEP 170
G VPR + D +E + IG+G +S V R + + + A+K V +F +
Sbjct: 10 GLVPRGSMADDDVLFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPG 69
Query: 171 ESVRFMAREIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLA------SHP 224
S + RE I L H ++++L L T LY+VFE+M D A L +
Sbjct: 70 LSTEDLKREASICHMLKHPHIVEL--LETYSSDGMLYMVFEFM--DGADLCFEIVKRADA 125
Query: 225 GLKFSEAQVKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLI---DNNGILKIADFGLASFY 281
G +SEA YM+Q+L L +CH ++HRD+K +L+ +N+ +K+ FG+A
Sbjct: 126 GFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVA-IQ 184
Query: 282 DPDQNQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYAG 329
+ RV T + PE++ YG VD+W G IL L +G
Sbjct: 185 LGESGLVAGGRVGTPHFMAPEVVKREP-YGKPVDVWGCGVILFILLSG 231
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 104/240 (43%), Gaps = 36/240 (15%)
Query: 179 EIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQ 238
EI IL++L+H +IK++ + Y+V E ME + EA K Y
Sbjct: 65 EIEILKKLNHPCIIKIKNFFDAE---DYYIVLELMEGGELFDKVVGNKRLKEATCKLYFY 121
Query: 239 QLLCGLDHCHSRGVLHRDIKGSNLLI---DNNGILKIADFGLASFYDPDQNQPLTSRVVT 295
Q+L + + H G++HRD+K N+L+ + + ++KI DFG + + + + T
Sbjct: 122 QMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCGT 179
Query: 296 LWYRPPELL--LGATYYGTAVDLWSTGCILAELYAGK-PIMPGRTEVEQLHKIFKLCGSP 352
Y PE+L +G Y AVD WS G IL +G P RT+V +I
Sbjct: 180 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQI------T 233
Query: 353 SEDYWRKSKLPHATIFKPQQPYKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALR 412
S Y + E + + AL L++ LL +DP R + ALR
Sbjct: 234 SGKY-------------------NFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR 274
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 104/240 (43%), Gaps = 36/240 (15%)
Query: 179 EIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQ 238
EI IL++L+H +IK++ + Y+V E ME + EA K Y
Sbjct: 190 EIEILKKLNHPCIIKIKNFFDAE---DYYIVLELMEGGELFDKVVGNKRLKEATCKLYFY 246
Query: 239 QLLCGLDHCHSRGVLHRDIKGSNLLI---DNNGILKIADFGLASFYDPDQNQPLTSRVVT 295
Q+L + + H G++HRD+K N+L+ + + ++KI DFG + + + + T
Sbjct: 247 QMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCGT 304
Query: 296 LWYRPPELL--LGATYYGTAVDLWSTGCILAELYAGK-PIMPGRTEVEQLHKIFKLCGSP 352
Y PE+L +G Y AVD WS G IL +G P RT+V +I
Sbjct: 305 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQI------T 358
Query: 353 SEDYWRKSKLPHATIFKPQQPYKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALR 412
S Y + E + + AL L++ LL +DP R + ALR
Sbjct: 359 SGKY-------------------NFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR 399
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 128/265 (48%), Gaps = 44/265 (16%)
Query: 125 VPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILR 184
VPR ++ + ++++G G + V+ K VA+K ++ ++ P++ F+A E ++++
Sbjct: 5 VPR--ETLKLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDA--FLA-EANLMK 58
Query: 185 RLDHINVIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHP-GLKFSEAQVKCYMQQLLC 242
+L H +++L +VT +Y++ EYME+ L P G+K + ++ Q+
Sbjct: 59 QLQHQRLVRLYAVVTQE---PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 115
Query: 243 GLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPE 302
G+ R +HRD++ +N+L+ + KIADFGLA + ++ + + PE
Sbjct: 116 GMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPE 175
Query: 303 LLLGATYYGTAV---DLWSTGCILAELYA-GKPIMPGRT--EV----------------- 339
A YGT D+WS G +L E+ G+ PG T EV
Sbjct: 176 ----AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCP 231
Query: 340 EQLHKIFKLCGS------PSEDYWR 358
E+L+++ +LC P+ DY R
Sbjct: 232 EELYQLMRLCWKERPEDRPTFDYLR 256
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 104/240 (43%), Gaps = 36/240 (15%)
Query: 179 EIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQ 238
EI IL++L+H +IK++ + Y+V E ME + EA K Y
Sbjct: 64 EIEILKKLNHPCIIKIKNFFDAE---DYYIVLELMEGGELFDKVVGNKRLKEATCKLYFY 120
Query: 239 QLLCGLDHCHSRGVLHRDIKGSNLLI---DNNGILKIADFGLASFYDPDQNQPLTSRVVT 295
Q+L + + H G++HRD+K N+L+ + + ++KI DFG + + + + T
Sbjct: 121 QMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCGT 178
Query: 296 LWYRPPELL--LGATYYGTAVDLWSTGCILAELYAGK-PIMPGRTEVEQLHKIFKLCGSP 352
Y PE+L +G Y AVD WS G IL +G P RT+V +I
Sbjct: 179 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQI------T 232
Query: 353 SEDYWRKSKLPHATIFKPQQPYKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALR 412
S Y + E + + AL L++ LL +DP R + ALR
Sbjct: 233 SGKY-------------------NFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR 273
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 102/204 (50%), Gaps = 15/204 (7%)
Query: 132 FEKLDKIGQGTYSNV----YRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLD 187
+K+ +G+G + V Y + ++VA+K ++ D P+ +EI ILR L
Sbjct: 16 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKAD-CGPQHRSGWKQEIDILRTLY 74
Query: 188 HINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASH-PGLKFSEAQVKCYMQQLLCGLDH 246
H ++IK +G + SL LV EY+ L L + P AQ+ + QQ+ G+ +
Sbjct: 75 HEHIIKYKGCCEDQGEKSLQLVMEYVP--LGSLRDYLPRHSIGLAQLLLFAQQICEGMAY 132
Query: 247 CHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSR----VVTLWYRPPE 302
HS+ +HR++ N+L+DN+ ++KI DFGLA P+ ++ R WY P
Sbjct: 133 LHSQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAV-PEGHEYYRVREDGDSPVFWYAPEC 191
Query: 303 LLLGATYYGTAVDLWSTGCILAEL 326
L YY A D+WS G L EL
Sbjct: 192 LKEYKFYY--ASDVWSFGVTLYEL 213
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 90/201 (44%), Gaps = 13/201 (6%)
Query: 138 IGQGTYSNVYRARDLDQKKIVALKKV---RFDNLEPESVRFMA-REIHILRRLD----HI 189
+G+G + V+ L + VA+K + R P S E+ +L ++ H
Sbjct: 39 LGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHP 98
Query: 190 NVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHS 249
VI+L ++ L L DL + G E +C+ Q++ + HCHS
Sbjct: 99 GVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKG-PLGEGPSRCFFGQVVAAIQHCHS 157
Query: 250 RGVLHRDIKGSNLLID-NNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGAT 308
RGV+HRDIK N+LID G K+ DFG + ++P T T Y PPE +
Sbjct: 158 RGVVHRDIKDENILIDLRRGCAKLIDFGSGALL---HDEPYTDFDGTRVYSPPEWISRHQ 214
Query: 309 YYGTAVDLWSTGCILAELYAG 329
Y+ +WS G +L ++ G
Sbjct: 215 YHALPATVWSLGILLYDMVCG 235
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 104/240 (43%), Gaps = 36/240 (15%)
Query: 179 EIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQ 238
EI IL++L+H +IK++ + Y+V E ME + EA K Y
Sbjct: 65 EIEILKKLNHPCIIKIKNFFDAE---DYYIVLELMEGGELFDKVVGNKRLKEATCKLYFY 121
Query: 239 QLLCGLDHCHSRGVLHRDIKGSNLLI---DNNGILKIADFGLASFYDPDQNQPLTSRVVT 295
Q+L + + H G++HRD+K N+L+ + + ++KI DFG + + + + T
Sbjct: 122 QMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCGT 179
Query: 296 LWYRPPELL--LGATYYGTAVDLWSTGCILAELYAGK-PIMPGRTEVEQLHKIFKLCGSP 352
Y PE+L +G Y AVD WS G IL +G P RT+V +I
Sbjct: 180 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQI------T 233
Query: 353 SEDYWRKSKLPHATIFKPQQPYKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALR 412
S Y + E + + AL L++ LL +DP R + ALR
Sbjct: 234 SGKY-------------------NFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR 274
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 104/225 (46%), Gaps = 40/225 (17%)
Query: 132 FEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINV 191
F++++ IG G + V++A+ K +++V+++N + E RE+ L +LDH+N+
Sbjct: 14 FKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAE------REVKALAKLDHVNI 67
Query: 192 IKLEGLVT----------------------------SRMSCSLYLVFEYMEHDLA--GLA 221
+ G S+ C L++ E+ + +
Sbjct: 68 VHYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKC-LFIQMEFCDKGTLEQWIE 126
Query: 222 SHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFY 281
G K + +Q+ G+D+ HS+ ++HRD+K SN+ + + +KI DFGL +
Sbjct: 127 KRRGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVDTKQVKIGDFGLVTSL 186
Query: 282 DPDQNQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAEL 326
D + T TL Y PE + + YG VDL++ G ILAEL
Sbjct: 187 KNDGKR--TRSKGTLRYMSPE-QISSQDYGKEVDLYALGLILAEL 228
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 128/265 (48%), Gaps = 44/265 (16%)
Query: 125 VPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILR 184
VPR ++ + ++++G G + V+ K VA+K ++ ++ P++ F+A E ++++
Sbjct: 10 VPR--ETLKLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDA--FLA-EANLMK 63
Query: 185 RLDHINVIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHP-GLKFSEAQVKCYMQQLLC 242
+L H +++L +VT +Y++ EYME+ L P G+K + ++ Q+
Sbjct: 64 QLQHQRLVRLYAVVTQE---PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 120
Query: 243 GLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPE 302
G+ R +HRD++ +N+L+ + KIADFGLA + ++ + + PE
Sbjct: 121 GMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPE 180
Query: 303 LLLGATYYGTAV---DLWSTGCILAELYA-GKPIMPGRT--EV----------------- 339
A YGT D+WS G +L E+ G+ PG T EV
Sbjct: 181 ----AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCP 236
Query: 340 EQLHKIFKLCGS------PSEDYWR 358
E+L+++ +LC P+ DY R
Sbjct: 237 EELYQLMRLCWKERPEDRPTFDYLR 261
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 104/231 (45%), Gaps = 36/231 (15%)
Query: 132 FEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINV 191
+E + IG G ++ V A + ++VA+K + + L + R + EI L+ L H ++
Sbjct: 12 YELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPR-IKTEIEALKNLRHQHI 70
Query: 192 IKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPG----------LKFSEAQVKCYMQQLL 241
C LY V E L PG + SE + + +Q++
Sbjct: 71 ------------CQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIV 118
Query: 242 CGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPP 301
+ + HS+G HRD+K NLL D LK+ DFGL + +++ L + +L Y P
Sbjct: 119 SAVAYVHSQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYAAP 178
Query: 302 ELLLGATYYGTAVDLWSTGCILAELYAG-------------KPIMPGRTEV 339
EL+ G +Y G+ D+WS G +L L G K IM G+ +V
Sbjct: 179 ELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRGKYDV 229
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 104/217 (47%), Gaps = 14/217 (6%)
Query: 124 WVPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHIL 183
W R D +E + IG G + V A +K+ VA+K++ + + S+ + +EI +
Sbjct: 5 WSINR-DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQT-SMDELLKEIQAM 62
Query: 184 RRLDHINVIKLEGLVTSRMSCSLYL-------VFEYMEHDLAGLASHPGLKFSEAQVKCY 236
+ H N++ + L + V + ++H +A H E+ +
Sbjct: 63 SQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAK-GEHKSGVLDESTIATI 121
Query: 237 MQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFY----DPDQNQPLTSR 292
++++L GL++ H G +HRD+K N+L+ +G ++IADFG+++F D +N+ +
Sbjct: 122 LREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTF 181
Query: 293 VVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYAG 329
V T + PE++ Y D+WS G EL G
Sbjct: 182 VGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATG 218
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 103/213 (48%), Gaps = 22/213 (10%)
Query: 130 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHI 189
D +E + ++G G + VY+A++ + + A K + D E + EI IL DH
Sbjct: 37 DFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVI--DTKSEEELEDYMVEIDILASCDHP 94
Query: 190 NVIKLEGLVTSRMSCSLYLVFEYMEH---DLAGLASHPGLKFSEAQVKCYMQQLLCGLDH 246
N++KL L +L+++ E+ D L L S+ QV C +Q L L++
Sbjct: 95 NIVKL--LDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVC--KQTLDALNY 150
Query: 247 CHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSR----VVTLWYRPPE 302
H ++HRD+K N+L +G +K+ADFG+++ +N R + T ++ PE
Sbjct: 151 LHDNKIIHRDLKAGNILFTLDGDIKLADFGVSA-----KNTRXIQRRDXFIGTPYWMAPE 205
Query: 303 LLLGATY----YGTAVDLWSTGCILAELYAGKP 331
+++ T Y D+WS G L E+ +P
Sbjct: 206 VVMCETSKDRPYDYKADVWSLGITLIEMAEIEP 238
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 104/240 (43%), Gaps = 36/240 (15%)
Query: 179 EIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQ 238
EI IL++L+H +IK++ + Y+V E ME + EA K Y
Sbjct: 204 EIEILKKLNHPCIIKIKNFFDAE---DYYIVLELMEGGELFDKVVGNKRLKEATCKLYFY 260
Query: 239 QLLCGLDHCHSRGVLHRDIKGSNLLI---DNNGILKIADFGLASFYDPDQNQPLTSRVVT 295
Q+L + + H G++HRD+K N+L+ + + ++KI DFG + + + + T
Sbjct: 261 QMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCGT 318
Query: 296 LWYRPPELL--LGATYYGTAVDLWSTGCILAELYAGK-PIMPGRTEVEQLHKIFKLCGSP 352
Y PE+L +G Y AVD WS G IL +G P RT+V +I
Sbjct: 319 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQI------T 372
Query: 353 SEDYWRKSKLPHATIFKPQQPYKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALR 412
S Y + E + + AL L++ LL +DP R + ALR
Sbjct: 373 SGKY-------------------NFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR 413
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 104/207 (50%), Gaps = 15/207 (7%)
Query: 135 LDKI-GQGTYSNVYRAR-DLDQKK--IVALKKVRFDNLEPESVRFMAREIHILRRLDHIN 190
+DK+ G G + V R L KK VA+K ++ E + F+ E I+ + DH N
Sbjct: 49 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG-EASIMGQFDHPN 107
Query: 191 VIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHS 249
+I+LEG+VT S + +V E ME+ L +F+ Q+ ++ + G+ +
Sbjct: 108 IIRLEGVVTK--SKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD 165
Query: 250 RGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSR---VVTLWYRPPELLLG 306
G +HRD+ N+LI++N + K++DFGL+ + D T+R + W P +
Sbjct: 166 MGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEA--IA 223
Query: 307 ATYYGTAVDLWSTGCILAEL--YAGKP 331
+ +A D+WS G +L E+ Y +P
Sbjct: 224 YRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 104/212 (49%), Gaps = 18/212 (8%)
Query: 130 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKV---RFDNLEPESVRFMAREIHILRRL 186
D +E + IG+G +S V R + + + A+K V +F + S + RE I L
Sbjct: 24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML 83
Query: 187 DHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLA------SHPGLKFSEAQVKCYMQQL 240
H ++++L L T LY+VFE+M D A L + G +SEA YM+Q+
Sbjct: 84 KHPHIVEL--LETYSSDGMLYMVFEFM--DGADLCFEIVKRADAGFVYSEAVASHYMRQI 139
Query: 241 LCGLDHCHSRGVLHRDIKGSNLLI---DNNGILKIADFGLASFYDPDQNQPLTSRVVTLW 297
L L +CH ++HRD+K +L+ +N+ +K+ FG+A + RV T
Sbjct: 140 LEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVA-IQLGESGLVAGGRVGTPH 198
Query: 298 YRPPELLLGATYYGTAVDLWSTGCILAELYAG 329
+ PE++ YG VD+W G IL L +G
Sbjct: 199 FMAPEVVKREP-YGKPVDVWGCGVILFILLSG 229
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 103/225 (45%), Gaps = 15/225 (6%)
Query: 125 VPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILR 184
+PR + E K+GQG + V+ + VA+K ++ + PE+ +E +++
Sbjct: 264 IPRESLRLEV--KLGQGCFGEVWMG-TWNGTTRVAIKTLKPGTMSPEA---FLQEAQVMK 317
Query: 185 RLDHINVIKLEGLVTSRMSCSLYLVFEYMEHD--LAGLASHPGLKFSEAQVKCYMQQLLC 242
+L H +++L +V+ +Y+V EYM L L G Q+ Q+
Sbjct: 318 KLRHEKLVQLYAVVSEE---PIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIAS 374
Query: 243 GLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFY-DPDQNQPLTSRVVTLWYRPP 301
G+ + +HRD++ +N+L+ N + K+ADFGLA D + ++ W P
Sbjct: 375 GMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE 434
Query: 302 ELLLGATYYGTAVDLWSTGCILAELYA-GKPIMPGRTEVEQLHKI 345
L G + D+WS G +L EL G+ PG E L ++
Sbjct: 435 AALYGR--FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 477
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 102/204 (50%), Gaps = 15/204 (7%)
Query: 132 FEKLDKIGQGTYSNV----YRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLD 187
+K+ +G+G + V Y + ++VA+K ++ D P+ +EI ILR L
Sbjct: 16 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKAD-CGPQHRSGWKQEIDILRTLY 74
Query: 188 HINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASH-PGLKFSEAQVKCYMQQLLCGLDH 246
H ++IK +G + SL LV EY+ L L + P AQ+ + QQ+ G+ +
Sbjct: 75 HEHIIKYKGCCEDQGEKSLQLVMEYVP--LGSLRDYLPRHSIGLAQLLLFAQQICEGMAY 132
Query: 247 CHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSR----VVTLWYRPPE 302
H++ +HR++ N+L+DN+ ++KI DFGLA P+ ++ R WY P
Sbjct: 133 LHAQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAV-PEGHEYYRVREDGDSPVFWYAPEC 191
Query: 303 LLLGATYYGTAVDLWSTGCILAEL 326
L YY A D+WS G L EL
Sbjct: 192 LKEYKFYY--ASDVWSFGVTLYEL 213
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 108/210 (51%), Gaps = 19/210 (9%)
Query: 131 SFEKLDK-IGQGTYSNVYRAR---DLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRL 186
S+ K+++ IG G + V R R ++ VA+K ++ E + F++ E I+ +
Sbjct: 14 SYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLS-EASIMGQF 72
Query: 187 DHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGL---KFSEAQVKCYMQQLLCG 243
+H N+I+LEG+VT+ M + ++ E+ME+ L S L +F+ Q+ ++ + G
Sbjct: 73 EHPNIIRLEGVVTNSMP--VMILTEFMEN--GALDSFLRLNDGQFTVIQLVGMLRGIASG 128
Query: 244 LDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFY-----DPDQNQPLTSRVVTLWY 298
+ + +HRD+ N+L+++N + K++DFGL+ F DP L ++ W
Sbjct: 129 MRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWT 188
Query: 299 RPPELLLGATYYGTAVDLWSTGCILAELYA 328
P + + +A D WS G ++ E+ +
Sbjct: 189 APEAIAFRK--FTSASDAWSYGIVMWEVMS 216
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 104/207 (50%), Gaps = 15/207 (7%)
Query: 135 LDKI-GQGTYSNVYRAR-DLDQKK--IVALKKVRFDNLEPESVRFMAREIHILRRLDHIN 190
+DK+ G G + V R L KK VA+K ++ E + F+ E I+ + DH N
Sbjct: 49 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG-EASIMGQFDHPN 107
Query: 191 VIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHS 249
+I+LEG+VT S + +V E ME+ L +F+ Q+ ++ + G+ +
Sbjct: 108 IIRLEGVVTK--SKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD 165
Query: 250 RGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSR---VVTLWYRPPELLLG 306
G +HRD+ N+LI++N + K++DFGL+ + D T+R + W P +
Sbjct: 166 MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEA--IA 223
Query: 307 ATYYGTAVDLWSTGCILAEL--YAGKP 331
+ +A D+WS G +L E+ Y +P
Sbjct: 224 YRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 128/265 (48%), Gaps = 44/265 (16%)
Query: 125 VPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILR 184
VPR ++ + ++++G G + V+ K VA+K ++ ++ P++ F+A E ++++
Sbjct: 6 VPR--ETLKLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDA--FLA-EANLMK 59
Query: 185 RLDHINVIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHP-GLKFSEAQVKCYMQQLLC 242
+L H +++L +VT +Y++ EYME+ L P G+K + ++ Q+
Sbjct: 60 QLQHQRLVRLYAVVTQE---PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 116
Query: 243 GLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPE 302
G+ R +HR+++ +N+L+ + KIADFGLA + ++ + + PE
Sbjct: 117 GMAFIEERNYIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPE 176
Query: 303 LLLGATYYGTAV---DLWSTGCILAELYA-GKPIMPGRT--EV----------------- 339
A YGT D+WS G +L E+ G+ PG T EV
Sbjct: 177 ----AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCP 232
Query: 340 EQLHKIFKLCGS------PSEDYWR 358
E+L+++ +LC P+ DY R
Sbjct: 233 EELYQLMRLCWKERPEDRPTFDYLR 257
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 104/207 (50%), Gaps = 15/207 (7%)
Query: 135 LDKI-GQGTYSNVYRAR-DLDQKK--IVALKKVRFDNLEPESVRFMAREIHILRRLDHIN 190
+DK+ G G + V R L KK VA+K ++ E + F+ E I+ + DH N
Sbjct: 20 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG-EASIMGQFDHPN 78
Query: 191 VIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHS 249
+I+LEG+VT S + +V E ME+ L +F+ Q+ ++ + G+ +
Sbjct: 79 IIRLEGVVTK--SKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD 136
Query: 250 RGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSR---VVTLWYRPPELLLG 306
G +HRD+ N+LI++N + K++DFGL+ + D T+R + W P +
Sbjct: 137 MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEA--IA 194
Query: 307 ATYYGTAVDLWSTGCILAEL--YAGKP 331
+ +A D+WS G +L E+ Y +P
Sbjct: 195 YRKFTSASDVWSYGIVLWEVMSYGERP 221
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 101/203 (49%), Gaps = 14/203 (6%)
Query: 138 IGQGTYSNVYRAR-DLDQKK--IVALKKVRFDNLEPESVRFMAREIHILRRLDHINVIKL 194
IG G + V R L K+ VA+K ++ E + F+ E I+ + DH N+I L
Sbjct: 30 IGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLG-EASIMGQFDHPNIIHL 88
Query: 195 EGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVL 253
EG+VT S + +V EYME+ L +F+ Q+ ++ + G+ + G +
Sbjct: 89 EGVVTK--SKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGISAGMKYLSDMGYV 146
Query: 254 HRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSR---VVTLWYRPPELLLGATYY 310
HRD+ N+LI++N + K++DFGL+ + D T+R + W P + +
Sbjct: 147 HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFRK--F 204
Query: 311 GTAVDLWSTGCILAEL--YAGKP 331
+A D+WS G ++ E+ Y +P
Sbjct: 205 TSASDVWSYGIVMWEVVSYGERP 227
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 133/295 (45%), Gaps = 40/295 (13%)
Query: 130 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHI 189
+ +E + ++G G + VY+A++ + + A K + + E + EI IL DH
Sbjct: 19 EVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKS--EEELEDYIVEIEILATCDHP 76
Query: 190 NVIKLEGLVTSRMSCSLYLVFEYM---EHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDH 246
++KL G L+++ E+ D L GL + QV C +Q+L L+
Sbjct: 77 YIVKLLG--AYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVC--RQMLEALNF 132
Query: 247 CHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLG 306
HS+ ++HRD+K N+L+ G +++ADFG+++ + Q S + T ++ PE+++
Sbjct: 133 LHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSA-KNLKTLQKRDSFIGTPYWMAPEVVMC 191
Query: 307 ATY----YGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSKL 362
T Y D+WS G L E+ I P E+ + + K+ KS
Sbjct: 192 ETMKDTPYDYKADIWSLGITLIEM---AQIEPPHHELNPMRVLLKIA---------KSDP 239
Query: 363 PHATIFKPQQPYKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALRSEFFT 417
P T+ P + + F+DF ++ L +P R SAA L F +
Sbjct: 240 P--TLLTPSK-----WSVEFRDF-------LKIALDKNPETRPSAAQLLEHPFVS 280
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 133/295 (45%), Gaps = 40/295 (13%)
Query: 130 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHI 189
+ +E + ++G G + VY+A++ + + A K + + E + EI IL DH
Sbjct: 11 EVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKS--EEELEDYIVEIEILATCDHP 68
Query: 190 NVIKLEGLVTSRMSCSLYLVFEYM---EHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDH 246
++KL G L+++ E+ D L GL + QV C +Q+L L+
Sbjct: 69 YIVKLLG--AYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVC--RQMLEALNF 124
Query: 247 CHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLG 306
HS+ ++HRD+K N+L+ G +++ADFG+++ + Q S + T ++ PE+++
Sbjct: 125 LHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSA-KNLKTLQKRDSFIGTPYWMAPEVVMC 183
Query: 307 ATY----YGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSKL 362
T Y D+WS G L E+ I P E+ + + K+ KS
Sbjct: 184 ETMKDTPYDYKADIWSLGITLIEM---AQIEPPHHELNPMRVLLKIA---------KSDP 231
Query: 363 PHATIFKPQQPYKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALRSEFFT 417
P T+ P + + F+DF ++ L +P R SAA L F +
Sbjct: 232 P--TLLTPSK-----WSVEFRDF-------LKIALDKNPETRPSAAQLLEHPFVS 272
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 99/202 (49%), Gaps = 9/202 (4%)
Query: 132 FEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPES----VRFMAREIHILRRLD 187
+++ +G+G + V R D + ++V +L+PES + + +EI ILR L
Sbjct: 23 LKRIRDLGEGHFGKVELCR-YDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLY 81
Query: 188 HINVIKLEGLVTSRMSCSLYLVFEYM-EHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDH 246
H N++K +G+ T + L+ E++ L K + Q Y Q+ G+D+
Sbjct: 82 HENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDY 141
Query: 247 CHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLT--SRVVTLWYRPPELL 304
SR +HRD+ N+L+++ +KI DFGL + D+ R +++ PE L
Sbjct: 142 LGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECL 201
Query: 305 LGATYYGTAVDLWSTGCILAEL 326
+ + +Y A D+WS G L EL
Sbjct: 202 MQSKFY-IASDVWSFGVTLHEL 222
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 102/208 (49%), Gaps = 8/208 (3%)
Query: 126 PRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNL-EPESVRFMAREIHILR 184
P F+ L IG+G+Y+ V R +I A+K V+ + + + E + ++ E H+
Sbjct: 5 PLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFE 64
Query: 185 RL-DHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCG 243
+ +H ++ L + L+ V EY+ K E + Y ++
Sbjct: 65 QASNHPFLVGLHSCFQTE--SRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLA 122
Query: 244 LDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVV-TLWYRPPE 302
L++ H RG+++RD+K N+L+D+ G +K+ D+G+ + + TS T Y PE
Sbjct: 123 LNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSXFCGTPNYIAPE 180
Query: 303 LLLGATYYGTAVDLWSTGCILAELYAGK 330
+L G YG +VD W+ G ++ E+ AG+
Sbjct: 181 ILRGED-YGFSVDWWALGVLMFEMMAGR 207
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 126/265 (47%), Gaps = 44/265 (16%)
Query: 125 VPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILR 184
VPR ++ + ++++G G V+ K VA+K ++ ++ P++ F+A E ++++
Sbjct: 10 VPR--ETLKLVERLGAGQAGEVWMGYYNGHTK-VAVKSLKQGSMSPDA--FLA-EANLMK 63
Query: 185 RLDHINVIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHP-GLKFSEAQVKCYMQQLLC 242
+L H +++L +VT +Y++ EYME+ L P G+K + ++ Q+
Sbjct: 64 QLQHQRLVRLYAVVTQE---PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 120
Query: 243 GLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPE 302
G+ R +HRD++ +N+L+ + KIADFGLA + + + + PE
Sbjct: 121 GMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPE 180
Query: 303 LLLGATYYGTAV---DLWSTGCILAELYA-GKPIMPGRT--EV----------------- 339
A YGT D+WS G +L E+ G+ PG T EV
Sbjct: 181 ----AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCP 236
Query: 340 EQLHKIFKLCGS------PSEDYWR 358
E+L+++ +LC P+ DY R
Sbjct: 237 EELYQLMRLCWKERPEDRPTFDYLR 261
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 103/219 (47%), Gaps = 10/219 (4%)
Query: 130 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHI 189
D ++ L+++G G + V+R + ++ K + + P + EI I+ +L H
Sbjct: 51 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFI--NTPYPLDKYTVKNEISIMNQLHHP 108
Query: 190 NVIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCH 248
+I L + + L+ E++ +L + K SEA+V YM+Q GL H H
Sbjct: 109 KLINLHDAFEDKYE--MVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMH 166
Query: 249 SRGVLHRDIKGSNLLIDNN--GILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLG 306
++H DIK N++ + +KI DFGLA+ +PD+ +T+ T + PE ++
Sbjct: 167 EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTT--ATAEFAAPE-IVD 223
Query: 307 ATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKI 345
G D+W+ G + L +G G ++E L +
Sbjct: 224 REPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNV 262
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 94/183 (51%), Gaps = 13/183 (7%)
Query: 157 IVALKKVRFDNLEPESVRFMAREIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEH- 215
VA+K ++ E + F++ E I+ + DH NVI LEG+VT S + ++ E+ME+
Sbjct: 63 FVAIKTLKSGYTEKQRRDFLS-EASIMGQFDHPNVIHLEGVVTK--STPVMIITEFMENG 119
Query: 216 DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADF 275
L +F+ Q+ ++ + G+ + +HRD+ N+L+++N + K++DF
Sbjct: 120 SLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDF 179
Query: 276 GLASFYDPDQNQP-----LTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAEL--YA 328
GL+ F + D + P L ++ W P + + +A D+WS G ++ E+ Y
Sbjct: 180 GLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRK--FTSASDVWSYGIVMWEVMSYG 237
Query: 329 GKP 331
+P
Sbjct: 238 ERP 240
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 101/202 (50%), Gaps = 8/202 (3%)
Query: 132 FEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNL-EPESVRFMAREIHILRRL-DHI 189
F+ L IG+G+Y+ V R +I A+K V+ + + + E + ++ E H+ + +H
Sbjct: 22 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHP 81
Query: 190 NVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHS 249
++ L + L+ V EY+ K E + Y ++ L++ H
Sbjct: 82 FLVGLHSCFQTE--SRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHE 139
Query: 250 RGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVV-TLWYRPPELLLGAT 308
RG+++RD+K N+L+D+ G +K+ D+G+ + + TS T Y PE+L G
Sbjct: 140 RGIIYRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSXFCGTPNYIAPEILRGED 197
Query: 309 YYGTAVDLWSTGCILAELYAGK 330
YG +VD W+ G ++ E+ AG+
Sbjct: 198 -YGFSVDWWALGVLMFEMMAGR 218
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 103/225 (45%), Gaps = 15/225 (6%)
Query: 125 VPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILR 184
+PR + E K+GQG + V+ + VA+K ++ + PE+ +E +++
Sbjct: 15 IPRESLRLEV--KLGQGCFGEVWMG-TWNGTTRVAIKTLKPGTMSPEA---FLQEAQVMK 68
Query: 185 RLDHINVIKLEGLVTSRMSCSLYLVFEYMEHD--LAGLASHPGLKFSEAQVKCYMQQLLC 242
+L H +++L +V+ +Y+V EYM L L G Q+ Q+
Sbjct: 69 KLRHEKLVQLYAVVSEE---PIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIAS 125
Query: 243 GLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFY-DPDQNQPLTSRVVTLWYRPP 301
G+ + +HRD++ +N+L+ N + K+ADFGLA D + ++ W P
Sbjct: 126 GMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPE 185
Query: 302 ELLLGATYYGTAVDLWSTGCILAELYA-GKPIMPGRTEVEQLHKI 345
L G + D+WS G +L EL G+ PG E L ++
Sbjct: 186 AALYGR--FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 228
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 101/202 (50%), Gaps = 8/202 (3%)
Query: 132 FEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNL-EPESVRFMAREIHILRRL-DHI 189
F+ L IG+G+Y+ V R +I A+K V+ + + + E + ++ E H+ + +H
Sbjct: 7 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHP 66
Query: 190 NVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHS 249
++ L + L+ V EY+ K E + Y ++ L++ H
Sbjct: 67 FLVGLHSCFQTE--SRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHE 124
Query: 250 RGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVV-TLWYRPPELLLGAT 308
RG+++RD+K N+L+D+ G +K+ D+G+ + + TS T Y PE+L G
Sbjct: 125 RGIIYRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSXFCGTPNYIAPEILRGED 182
Query: 309 YYGTAVDLWSTGCILAELYAGK 330
YG +VD W+ G ++ E+ AG+
Sbjct: 183 -YGFSVDWWALGVLMFEMMAGR 203
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 103/225 (45%), Gaps = 15/225 (6%)
Query: 125 VPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILR 184
+PR + E K+GQG + V+ + VA+K ++ N+ PE+ +E +++
Sbjct: 182 IPRESLRLEV--KLGQGCFGEVWMG-TWNGTTRVAIKTLKPGNMSPEA---FLQEAQVMK 235
Query: 185 RLDHINVIKLEGLVTSRMSCSLYLVFEYMEHD--LAGLASHPGLKFSEAQVKCYMQQLLC 242
+L H +++L +V+ +Y+V EYM L L G Q+ Q+
Sbjct: 236 KLRHEKLVQLYAVVSEE---PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIAS 292
Query: 243 GLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFY-DPDQNQPLTSRVVTLWYRPP 301
G+ + +HRD++ +N+L+ N + K+ADFGL D + ++ W P
Sbjct: 293 GMAYVERMNYVHRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPE 352
Query: 302 ELLLGATYYGTAVDLWSTGCILAELYA-GKPIMPGRTEVEQLHKI 345
L G + D+WS G +L EL G+ PG E L ++
Sbjct: 353 AALYGR--FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 395
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 95/202 (47%), Gaps = 17/202 (8%)
Query: 138 IGQGTYSNVYRARDLDQKKIVALKKVRFDNLE-----PESVRFMAREIHILRRLD--HIN 190
+G G + +VY + VA+K V D + P R + E+ +L+++
Sbjct: 16 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFSG 74
Query: 191 VIKLEGLVTSRMSCSLYLVFEYME--HDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCH 248
VI+L L S L+ E ME DL + G E + + Q+L + HCH
Sbjct: 75 VIRL--LDWFERPDSFVLILERMEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCH 131
Query: 249 SRGVLHRDIKGSNLLID-NNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGA 307
+ GVLHRDIK N+LID N G LK+ DFG + ++ T T Y PPE +
Sbjct: 132 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYH 188
Query: 308 TYYGTAVDLWSTGCILAELYAG 329
Y+G + +WS G +L ++ G
Sbjct: 189 RYHGRSAAVWSLGILLYDMVCG 210
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 102/225 (45%), Gaps = 15/225 (6%)
Query: 125 VPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILR 184
+PR +S + + ++G G + V+ K VA+K ++ + PES E I++
Sbjct: 6 IPR--ESLQLIKRLGNGQFGEVWMGTWNGNTK-VAIKTLKPGTMSPES---FLEEAQIMK 59
Query: 185 RLDHINVIKLEGLVTSRMSCSLYLVFEYMEHD--LAGLASHPGLKFSEAQVKCYMQQLLC 242
+L H +++L +V+ +Y+V EYM L L G + Q+
Sbjct: 60 KLKHDKLVQLYAVVSEE---PIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAA 116
Query: 243 GLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFY-DPDQNQPLTSRVVTLWYRPP 301
G+ + +HRD++ +N+L+ N I KIADFGLA D + ++ W P
Sbjct: 117 GMAYIERMNYIHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPE 176
Query: 302 ELLLGATYYGTAVDLWSTGCILAELYA-GKPIMPGRTEVEQLHKI 345
L G + D+WS G +L EL G+ PG E L ++
Sbjct: 177 AALYGR--FTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQV 219
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 99/202 (49%), Gaps = 9/202 (4%)
Query: 132 FEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPES----VRFMAREIHILRRLD 187
+++ +G+G + V R D + ++V +L+PES + + +EI ILR L
Sbjct: 11 LKRIRDLGEGHFGKVELCR-YDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLY 69
Query: 188 HINVIKLEGLVTSRMSCSLYLVFEYM-EHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDH 246
H N++K +G+ T + L+ E++ L K + Q Y Q+ G+D+
Sbjct: 70 HENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDY 129
Query: 247 CHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLT--SRVVTLWYRPPELL 304
SR +HRD+ N+L+++ +KI DFGL + D+ R +++ PE L
Sbjct: 130 LGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECL 189
Query: 305 LGATYYGTAVDLWSTGCILAEL 326
+ + +Y A D+WS G L EL
Sbjct: 190 MQSKFY-IASDVWSFGVTLHEL 210
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 104/203 (51%), Gaps = 14/203 (6%)
Query: 138 IGQGTYSNVYRAR-DLDQKK--IVALKKVRFDNLEPESVRFMAREIHILRRLDHINVIKL 194
IG G + V R L K+ VA+K ++ E + F+ E I+ + DH NV+ L
Sbjct: 51 IGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLC-EASIMGQFDHPNVVHL 109
Query: 195 EGLVTSRMSCSLYLVFEYMEHDL--AGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGV 252
EG+VT + +V E+ME+ A L H G +F+ Q+ ++ + G+ + G
Sbjct: 110 EGVVTR--GKPVMIVIEFMENGALDAFLRKHDG-QFTVIQLVGMLRGIAAGMRYLADMGY 166
Query: 253 LHRDIKGSNLLIDNNGILKIADFGLASFY--DPDQNQPLTSRVVTLWYRPPELLLGATYY 310
+HRD+ N+L+++N + K++DFGL+ DP+ T + + + PE + +
Sbjct: 167 VHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPE-AIQYRKF 225
Query: 311 GTAVDLWSTGCILAEL--YAGKP 331
+A D+WS G ++ E+ Y +P
Sbjct: 226 TSASDVWSYGIVMWEVMSYGERP 248
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 101/202 (50%), Gaps = 8/202 (3%)
Query: 132 FEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNL-EPESVRFMAREIHILRRL-DHI 189
F+ L IG+G+Y+ V R +I A++ V+ + + + E + ++ E H+ + +H
Sbjct: 54 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHP 113
Query: 190 NVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHS 249
++ L + L+ V EY+ K E + Y ++ L++ H
Sbjct: 114 FLVGLHSCFQTE--SRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHE 171
Query: 250 RGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVV-TLWYRPPELLLGAT 308
RG+++RD+K N+L+D+ G +K+ D+G+ + + TS T Y PE+L G
Sbjct: 172 RGIIYRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSTFCGTPNYIAPEILRGED 229
Query: 309 YYGTAVDLWSTGCILAELYAGK 330
YG +VD W+ G ++ E+ AG+
Sbjct: 230 -YGFSVDWWALGVLMFEMMAGR 250
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 103/225 (45%), Gaps = 15/225 (6%)
Query: 125 VPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILR 184
+PR + E K+GQG + V+ + VA+K ++ + PE+ +E +++
Sbjct: 181 IPRESLRLEV--KLGQGCFGEVWMG-TWNGTTRVAIKTLKPGTMSPEA---FLQEAQVMK 234
Query: 185 RLDHINVIKLEGLVTSRMSCSLYLVFEYMEHD--LAGLASHPGLKFSEAQVKCYMQQLLC 242
+L H +++L +V+ +Y+V EYM L L G Q+ Q+
Sbjct: 235 KLRHEKLVQLYAVVSEE---PIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIAS 291
Query: 243 GLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFY-DPDQNQPLTSRVVTLWYRPP 301
G+ + +HRD++ +N+L+ N + K+ADFGLA D + ++ W P
Sbjct: 292 GMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE 351
Query: 302 ELLLGATYYGTAVDLWSTGCILAELYA-GKPIMPGRTEVEQLHKI 345
L G + D+WS G +L EL G+ PG E L ++
Sbjct: 352 AALYGR--FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 394
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 127/282 (45%), Gaps = 33/282 (11%)
Query: 126 PRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMA-REIHILR 184
P ++F + +G+G + V + K+ A KK+ ++ MA E IL
Sbjct: 180 PVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILE 239
Query: 185 RLDHINVIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPG-LKFSEAQVKCYMQQLLC 242
+++ V+ L ++ + L LV M DL H G F EA+ Y ++ C
Sbjct: 240 KVNSRFVVSLAYAYETKDA--LCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICC 297
Query: 243 GLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPE 302
GL+ H +++RD+K N+L+D++G ++I+D GLA + Q + RV T+ Y PE
Sbjct: 298 GLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHV--PEGQTIKGRVGTVGYMAPE 355
Query: 303 LLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSKL 362
++ Y + D W+ GC+L E+ AG+ R + + ++ +L E+Y +
Sbjct: 356 VVKNERYTFSP-DWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSER--- 411
Query: 363 PHATIFKPQQPYKRCVAETFKDFPAPALALMETLLSIDPADR 404
F PQ A +L LL DPA+R
Sbjct: 412 -----FSPQ-----------------ARSLCSQLLCKDPAER 431
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 103/225 (45%), Gaps = 15/225 (6%)
Query: 125 VPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILR 184
+PR + E K+GQG + V+ + VA+K ++ + PE+ +E +++
Sbjct: 181 IPRESLRLEV--KLGQGCFGEVWMG-TWNGTTRVAIKTLKPGTMSPEA---FLQEAQVMK 234
Query: 185 RLDHINVIKLEGLVTSRMSCSLYLVFEYMEHD--LAGLASHPGLKFSEAQVKCYMQQLLC 242
+L H +++L +V+ +Y+V EYM L L G Q+ Q+
Sbjct: 235 KLRHEKLVQLYAVVSEE---PIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIAS 291
Query: 243 GLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFY-DPDQNQPLTSRVVTLWYRPP 301
G+ + +HRD++ +N+L+ N + K+ADFGLA D + ++ W P
Sbjct: 292 GMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE 351
Query: 302 ELLLGATYYGTAVDLWSTGCILAELYA-GKPIMPGRTEVEQLHKI 345
L G + D+WS G +L EL G+ PG E L ++
Sbjct: 352 AALYGR--FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 394
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 103/225 (45%), Gaps = 15/225 (6%)
Query: 125 VPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILR 184
+PR + E K+GQG + V+ + VA+K ++ + PE+ +E +++
Sbjct: 12 IPRESLRLEV--KLGQGCFGEVWMG-TWNGTTRVAIKTLKPGTMSPEA---FLQEAQVMK 65
Query: 185 RLDHINVIKLEGLVTSRMSCSLYLVFEYMEHD--LAGLASHPGLKFSEAQVKCYMQQLLC 242
+L H +++L +V+ +Y+V EYM L L G Q+ Q+
Sbjct: 66 KLRHEKLVQLYAVVSEE---PIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIAS 122
Query: 243 GLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFY-DPDQNQPLTSRVVTLWYRPP 301
G+ + +HRD++ +N+L+ N + K+ADFGLA D + ++ W P
Sbjct: 123 GMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPE 182
Query: 302 ELLLGATYYGTAVDLWSTGCILAELYA-GKPIMPGRTEVEQLHKI 345
L G + D+WS G +L EL G+ PG E L ++
Sbjct: 183 AALYGR--FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 225
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 103/225 (45%), Gaps = 15/225 (6%)
Query: 125 VPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILR 184
+PR + E K+GQG + V+ + VA+K ++ + PE+ +E +++
Sbjct: 15 IPRESLRLEV--KLGQGCFGEVWMG-TWNGTTRVAIKTLKPGTMSPEA---FLQEAQVMK 68
Query: 185 RLDHINVIKLEGLVTSRMSCSLYLVFEYMEHD--LAGLASHPGLKFSEAQVKCYMQQLLC 242
+L H +++L +V+ +Y+V EYM L L G Q+ Q+
Sbjct: 69 KLRHEKLVQLYAVVSEE---PIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIAS 125
Query: 243 GLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFY-DPDQNQPLTSRVVTLWYRPP 301
G+ + +HRD++ +N+L+ N + K+ADFGLA D + ++ W P
Sbjct: 126 GMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE 185
Query: 302 ELLLGATYYGTAVDLWSTGCILAELYA-GKPIMPGRTEVEQLHKI 345
L G + D+WS G +L EL G+ PG E L ++
Sbjct: 186 AALYGR--FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 228
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 103/225 (45%), Gaps = 15/225 (6%)
Query: 125 VPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILR 184
+PR + E K+GQG + V+ + VA+K ++ + PE+ +E +++
Sbjct: 15 IPRESLRLEV--KLGQGCFGEVWMG-TWNGTTRVAIKTLKPGTMSPEA---FLQEAQVMK 68
Query: 185 RLDHINVIKLEGLVTSRMSCSLYLVFEYMEHD--LAGLASHPGLKFSEAQVKCYMQQLLC 242
+L H +++L +V+ +Y+V EYM L L G Q+ Q+
Sbjct: 69 KLRHEKLVQLYAVVSEE---PIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIAS 125
Query: 243 GLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFY-DPDQNQPLTSRVVTLWYRPP 301
G+ + +HRD++ +N+L+ N + K+ADFGLA D + ++ W P
Sbjct: 126 GMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE 185
Query: 302 ELLLGATYYGTAVDLWSTGCILAELYA-GKPIMPGRTEVEQLHKI 345
L G + D+WS G +L EL G+ PG E L ++
Sbjct: 186 AALYGR--FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 228
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 103/225 (45%), Gaps = 15/225 (6%)
Query: 125 VPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILR 184
+PR + E K+GQG + V+ + VA+K ++ + PE+ +E +++
Sbjct: 12 IPRESLRLEV--KLGQGCFGEVWMG-TWNGTTRVAIKTLKPGTMSPEA---FLQEAQVMK 65
Query: 185 RLDHINVIKLEGLVTSRMSCSLYLVFEYMEHD--LAGLASHPGLKFSEAQVKCYMQQLLC 242
+L H +++L +V+ +Y+V EYM L L G Q+ Q+
Sbjct: 66 KLRHEKLVQLYAVVSEE---PIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIAS 122
Query: 243 GLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFY-DPDQNQPLTSRVVTLWYRPP 301
G+ + +HRD++ +N+L+ N + K+ADFGLA D + ++ W P
Sbjct: 123 GMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE 182
Query: 302 ELLLGATYYGTAVDLWSTGCILAELYA-GKPIMPGRTEVEQLHKI 345
L G + D+WS G +L EL G+ PG E L ++
Sbjct: 183 AALYGR--FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 225
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 127/282 (45%), Gaps = 33/282 (11%)
Query: 126 PRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMA-REIHILR 184
P ++F + +G+G + V + K+ A KK+ ++ MA E IL
Sbjct: 180 PVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILE 239
Query: 185 RLDHINVIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPG-LKFSEAQVKCYMQQLLC 242
+++ V+ L ++ + L LV M DL H G F EA+ Y ++ C
Sbjct: 240 KVNSRFVVSLAYAYETKDA--LCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICC 297
Query: 243 GLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPE 302
GL+ H +++RD+K N+L+D++G ++I+D GLA + Q + RV T+ Y PE
Sbjct: 298 GLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHV--PEGQTIKGRVGTVGYMAPE 355
Query: 303 LLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSKL 362
++ Y + D W+ GC+L E+ AG+ R + + ++ +L E+Y +
Sbjct: 356 VVKNERYTFSP-DWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSER--- 411
Query: 363 PHATIFKPQQPYKRCVAETFKDFPAPALALMETLLSIDPADR 404
F PQ A +L LL DPA+R
Sbjct: 412 -----FSPQ-----------------ARSLCSQLLCKDPAER 431
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 99/207 (47%), Gaps = 16/207 (7%)
Query: 130 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDN-LEPESVRFMAREIHILRRLDH 188
D+FE + +G+G++ V AR + + A+K ++ D L+ + V E IL
Sbjct: 23 DNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRIL----- 77
Query: 189 INVIKLEGLVTSRMSC-----SLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCG 243
++ + +T C L+ V E++ +F EA+ + Y +++
Sbjct: 78 -SLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISA 136
Query: 244 LDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVV-TLWYRPPE 302
L H +G+++RD+K N+L+D+ G K+ADFG+ + N T+ T Y PE
Sbjct: 137 LMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCK--EGICNGVTTATFCGTPDYIAPE 194
Query: 303 LLLGATYYGTAVDLWSTGCILAELYAG 329
+L YG AVD W+ G +L E+ G
Sbjct: 195 -ILQEMLYGPAVDWWAMGVLLYEMLCG 220
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 104/215 (48%), Gaps = 13/215 (6%)
Query: 135 LDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINVIKL 194
+ +IG G + V+ L++ K VA+K +R + E E ++ +L H +++L
Sbjct: 12 VQEIGSGQFGLVHLGYWLNKDK-VAIKTIREGAMSEED---FIEEAEVMMKLSHPKLVQL 67
Query: 195 EGLVTSRMSCSLYLVFEYMEHDLAG--LASHPGLKFSEAQVKCYMQQLLC-GLDHCHSRG 251
G+ + + LVFE+MEH L + GL +E + + +C G+ +
Sbjct: 68 YGVCLEQ--APICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLD--VCEGMAYLEEAS 123
Query: 252 VLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGATYYG 311
V+HRD+ N L+ N ++K++DFG+ F DQ T + + PE + + Y
Sbjct: 124 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPE-VFSFSRYS 182
Query: 312 TAVDLWSTGCILAELYA-GKPIMPGRTEVEQLHKI 345
+ D+WS G ++ E+++ GK R+ E + I
Sbjct: 183 SKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI 217
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 103/225 (45%), Gaps = 15/225 (6%)
Query: 125 VPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILR 184
+PR + E K+GQG + V+ + VA+K ++ + PE+ +E +++
Sbjct: 8 IPRESLRLEV--KLGQGCFGEVWMG-TWNGTTRVAIKTLKPGTMSPEA---FLQEAQVMK 61
Query: 185 RLDHINVIKLEGLVTSRMSCSLYLVFEYMEHD--LAGLASHPGLKFSEAQVKCYMQQLLC 242
+L H +++L +V+ +Y+V EYM L L G Q+ Q+
Sbjct: 62 KLRHEKLVQLYAVVSEE---PIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIAS 118
Query: 243 GLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFY-DPDQNQPLTSRVVTLWYRPP 301
G+ + +HRD++ +N+L+ N + K+ADFGLA D + ++ W P
Sbjct: 119 GMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE 178
Query: 302 ELLLGATYYGTAVDLWSTGCILAELYA-GKPIMPGRTEVEQLHKI 345
L G + D+WS G +L EL G+ PG E L ++
Sbjct: 179 AALYGR--FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 221
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 103/225 (45%), Gaps = 15/225 (6%)
Query: 125 VPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILR 184
+PR + E K+GQG + V+ + VA+K ++ + PE+ +E +++
Sbjct: 181 IPRESLRLEV--KLGQGCFGEVWMG-TWNGTTRVAIKTLKPGTMSPEA---FLQEAQVMK 234
Query: 185 RLDHINVIKLEGLVTSRMSCSLYLVFEYMEHD--LAGLASHPGLKFSEAQVKCYMQQLLC 242
+L H +++L +V+ +Y+V EYM L L G Q+ Q+
Sbjct: 235 KLRHEKLVQLYAVVSEE---PIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIAS 291
Query: 243 GLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFY-DPDQNQPLTSRVVTLWYRPP 301
G+ + +HRD++ +N+L+ N + K+ADFGLA D + ++ W P
Sbjct: 292 GMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE 351
Query: 302 ELLLGATYYGTAVDLWSTGCILAELYA-GKPIMPGRTEVEQLHKI 345
L G + D+WS G +L EL G+ PG E L ++
Sbjct: 352 AALYGR--FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 394
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 118/243 (48%), Gaps = 31/243 (12%)
Query: 127 RRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRL 186
R FE + +G+G + V+ A++ A+K++R N E + M RE+ L +L
Sbjct: 2 RYLTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVM-REVKALAKL 60
Query: 187 DHINVIK-----LEGLVTSRMSCSLYLVFEYMEHDLA-------GLASHPGLKFSEAQVK 234
+H +++ LE T ++ S V+ Y++ L + ++ E V
Sbjct: 61 EHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVC 120
Query: 235 CYM-QQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQ-----P 288
++ Q+ ++ HS+G++HRD+K SN+ + ++K+ DFGL + D D+ + P
Sbjct: 121 LHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTP 180
Query: 289 L------TSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQL 342
+ T +V T Y PE + G + Y VD++S G IL EL + P T++E++
Sbjct: 181 MPAYARHTGQVGTKLYMSPEQIHGNS-YSHKVDIFSLGLILFEL-----LYPFSTQMERV 234
Query: 343 HKI 345
+
Sbjct: 235 RTL 237
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 104/230 (45%), Gaps = 11/230 (4%)
Query: 132 FEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINV 191
FE + +G G +S V A + K+ A+K + L+ + + EI +LR++ H N+
Sbjct: 24 FEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESS-IENEIAVLRKIKHENI 82
Query: 192 IKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSR 250
+ LE + S LYLV + + +L G ++E ++Q+L + + H
Sbjct: 83 VALEDIYES--PNHLYLVMQLVSGGELFDRIVEKGF-YTEKDASTLIRQVLDAVYYLHRM 139
Query: 251 GVLHRDIKGSNLLI---DNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGA 307
G++HRD+K NLL D + I+DFGL+ + +++ T Y PE +L
Sbjct: 140 GIVHRDLKPENLLYYSQDEESKIMISDFGLSKM--EGKGDVMSTACGTPGYVAPE-VLAQ 196
Query: 308 TYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYW 357
Y AVD WS G I L G P + + +I K YW
Sbjct: 197 KPYSKAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYEFDSPYW 246
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 101/204 (49%), Gaps = 15/204 (7%)
Query: 132 FEKLDKIGQGTYSNV----YRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLD 187
+K+ +G+G + V Y + ++VA+K ++ + P+ REI ILR L
Sbjct: 11 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALK-EGCGPQLRSGWQREIEILRTLY 69
Query: 188 HINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASH-PGLKFSEAQVKCYMQQLLCGLDH 246
H +++K +G + S+ LV EY+ L L + P AQ+ + QQ+ G+ +
Sbjct: 70 HEHIVKYKGCCEDQGEKSVQLVMEYV--PLGSLRDYLPRHCVGLAQLLLFAQQICEGMAY 127
Query: 247 CHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSR----VVTLWYRPPE 302
H++ +HR + N+L+DN+ ++KI DFGLA P+ ++ R WY P
Sbjct: 128 LHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAV-PEGHEYYRVREDGDSPVFWYAPEC 186
Query: 303 LLLGATYYGTAVDLWSTGCILAEL 326
L YY A D+WS G L EL
Sbjct: 187 LKECKFYY--ASDVWSFGVTLYEL 208
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 103/225 (45%), Gaps = 15/225 (6%)
Query: 125 VPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILR 184
+PR + E K+GQG + V+ + VA+K ++ + PE+ +E +++
Sbjct: 15 IPRESLRLEV--KLGQGCFGEVWMG-TWNGTTRVAIKTLKPGTMSPEA---FLQEAQVMK 68
Query: 185 RLDHINVIKLEGLVTSRMSCSLYLVFEYMEHD--LAGLASHPGLKFSEAQVKCYMQQLLC 242
+L H +++L +V+ +Y+V EYM L L G Q+ Q+
Sbjct: 69 KLRHEKLVQLYAVVSEE---PIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIAS 125
Query: 243 GLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFY-DPDQNQPLTSRVVTLWYRPP 301
G+ + +HRD++ +N+L+ N + K+ADFGLA D + ++ W P
Sbjct: 126 GMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE 185
Query: 302 ELLLGATYYGTAVDLWSTGCILAELYA-GKPIMPGRTEVEQLHKI 345
L G + D+WS G +L EL G+ PG E L ++
Sbjct: 186 AALYGR--FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 228
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 103/225 (45%), Gaps = 15/225 (6%)
Query: 125 VPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILR 184
+PR + E K+GQG + V+ + VA+K ++ + PE+ +E +++
Sbjct: 15 IPRESLRLEV--KLGQGCFGEVWMG-TWNGTTRVAIKTLKPGTMSPEA---FLQEAQVMK 68
Query: 185 RLDHINVIKLEGLVTSRMSCSLYLVFEYMEHD--LAGLASHPGLKFSEAQVKCYMQQLLC 242
+L H +++L +V+ +Y+V EYM L L G Q+ Q+
Sbjct: 69 KLRHEKLVQLYAVVSEE---PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIAS 125
Query: 243 GLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFY-DPDQNQPLTSRVVTLWYRPP 301
G+ + +HRD++ +N+L+ N + K+ADFGLA D + ++ W P
Sbjct: 126 GMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE 185
Query: 302 ELLLGATYYGTAVDLWSTGCILAELYA-GKPIMPGRTEVEQLHKI 345
L G + D+WS G +L EL G+ PG E L ++
Sbjct: 186 AALYGR--FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 228
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 101/204 (49%), Gaps = 15/204 (7%)
Query: 132 FEKLDKIGQGTYSNV----YRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLD 187
+K+ +G+G + V Y + ++VA+K ++ + P+ REI ILR L
Sbjct: 10 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALK-EGCGPQLRSGWQREIEILRTLY 68
Query: 188 HINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASH-PGLKFSEAQVKCYMQQLLCGLDH 246
H +++K +G + S+ LV EY+ L L + P AQ+ + QQ+ G+ +
Sbjct: 69 HEHIVKYKGCCEDQGEKSVQLVMEYV--PLGSLRDYLPRHCVGLAQLLLFAQQICEGMAY 126
Query: 247 CHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSR----VVTLWYRPPE 302
H++ +HR + N+L+DN+ ++KI DFGLA P+ ++ R WY P
Sbjct: 127 LHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAV-PEGHEYYRVREDGDSPVFWYAPEC 185
Query: 303 LLLGATYYGTAVDLWSTGCILAEL 326
L YY A D+WS G L EL
Sbjct: 186 LKECKFYY--ASDVWSFGVTLYEL 207
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 103/225 (45%), Gaps = 15/225 (6%)
Query: 125 VPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILR 184
+PR + E K+GQG + V+ + VA+K ++ + PE+ +E +++
Sbjct: 6 IPRESLRLEV--KLGQGCFGEVWMG-TWNGTTRVAIKTLKPGTMSPEA---FLQEAQVMK 59
Query: 185 RLDHINVIKLEGLVTSRMSCSLYLVFEYMEHD--LAGLASHPGLKFSEAQVKCYMQQLLC 242
+L H +++L +V+ +Y+V EYM L L G Q+ Q+
Sbjct: 60 KLRHEKLVQLYAVVSEE---PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIAS 116
Query: 243 GLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFY-DPDQNQPLTSRVVTLWYRPP 301
G+ + +HRD++ +N+L+ N + K+ADFGLA D + ++ W P
Sbjct: 117 GMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE 176
Query: 302 ELLLGATYYGTAVDLWSTGCILAELYA-GKPIMPGRTEVEQLHKI 345
L G + D+WS G +L EL G+ PG E L ++
Sbjct: 177 AALYGR--FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 219
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 108/230 (46%), Gaps = 21/230 (9%)
Query: 132 FEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHIN- 190
+ L +IG G S V++ + ++K+I A+K V + + +++ EI L +L +
Sbjct: 58 YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 116
Query: 191 -VIKLEGL-VTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCH 248
+I+L +T + +Y+V E DL + K Y + +L + H
Sbjct: 117 KIIRLYDYEITDQY---IYMVMECGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIH 172
Query: 249 SRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLT-SRVVTLWYRPPELLLGA 307
G++H D+K +N LI +G+LK+ DFG+A+ PD + S+V T+ Y PPE +
Sbjct: 173 QHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDM 231
Query: 308 T----------YYGTAVDLWSTGCILAELYAGK-PIMPGRTEVEQLHKIF 346
+ D+WS GCIL + GK P ++ +LH I
Sbjct: 232 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAII 281
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 104/215 (48%), Gaps = 13/215 (6%)
Query: 135 LDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINVIKL 194
+ +IG G + V+ L++ K VA+K +R + E E ++ +L H +++L
Sbjct: 15 VQEIGSGQFGLVHLGYWLNKDK-VAIKTIREGAMSEED---FIEEAEVMMKLSHPKLVQL 70
Query: 195 EGLVTSRMSCSLYLVFEYMEHDLAG--LASHPGLKFSEAQVKCYMQQLLC-GLDHCHSRG 251
G+ + + LVFE+MEH L + GL +E + + +C G+ +
Sbjct: 71 YGVCLEQ--APICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLD--VCEGMAYLEEAC 126
Query: 252 VLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGATYYG 311
V+HRD+ N L+ N ++K++DFG+ F DQ T + + PE + + Y
Sbjct: 127 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPE-VFSFSRYS 185
Query: 312 TAVDLWSTGCILAELYA-GKPIMPGRTEVEQLHKI 345
+ D+WS G ++ E+++ GK R+ E + I
Sbjct: 186 SKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI 220
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 104/215 (48%), Gaps = 13/215 (6%)
Query: 135 LDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINVIKL 194
+ +IG G + V+ L++ K VA+K +R + E E ++ +L H +++L
Sbjct: 12 VQEIGSGQFGLVHLGYWLNKDK-VAIKTIREGAMSEED---FIEEAEVMMKLSHPKLVQL 67
Query: 195 EGLVTSRMSCSLYLVFEYMEHDLAG--LASHPGLKFSEAQVKCYMQQLLC-GLDHCHSRG 251
G+ + + LVFE+MEH L + GL +E + + +C G+ +
Sbjct: 68 YGVCLEQ--APICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLD--VCEGMAYLEEAC 123
Query: 252 VLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGATYYG 311
V+HRD+ N L+ N ++K++DFG+ F DQ T + + PE + + Y
Sbjct: 124 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPE-VFSFSRYS 182
Query: 312 TAVDLWSTGCILAELYA-GKPIMPGRTEVEQLHKI 345
+ D+WS G ++ E+++ GK R+ E + I
Sbjct: 183 SKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI 217
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 103/225 (45%), Gaps = 15/225 (6%)
Query: 125 VPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILR 184
+PR + E K+GQG + V+ + VA+K ++ + PE+ +E +++
Sbjct: 15 IPRESLRLEV--KLGQGCFGEVWMG-TWNGTTRVAIKTLKPGTMSPEA---FLQEAQVMK 68
Query: 185 RLDHINVIKLEGLVTSRMSCSLYLVFEYMEHD--LAGLASHPGLKFSEAQVKCYMQQLLC 242
+L H +++L +V+ +Y+V EYM L L G Q+ Q+
Sbjct: 69 KLRHEKLVQLYAVVSEE---PIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIAS 125
Query: 243 GLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFY-DPDQNQPLTSRVVTLWYRPP 301
G+ + +HRD++ +N+L+ N + K+ADFGLA D + ++ W P
Sbjct: 126 GMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE 185
Query: 302 ELLLGATYYGTAVDLWSTGCILAELYA-GKPIMPGRTEVEQLHKI 345
L G + D+WS G +L EL G+ PG E L ++
Sbjct: 186 AALYGR--FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 228
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 103/225 (45%), Gaps = 15/225 (6%)
Query: 125 VPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILR 184
+PR + E K+GQG + V+ + VA+K ++ + PE+ +E +++
Sbjct: 4 IPRESLRLEV--KLGQGCFGEVWMG-TWNGTTRVAIKTLKPGTMSPEA---FLQEAQVMK 57
Query: 185 RLDHINVIKLEGLVTSRMSCSLYLVFEYMEHD--LAGLASHPGLKFSEAQVKCYMQQLLC 242
+L H +++L +V+ +Y+V EYM L L G Q+ Q+
Sbjct: 58 KLRHEKLVQLYAVVSEE---PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIAS 114
Query: 243 GLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFY-DPDQNQPLTSRVVTLWYRPP 301
G+ + +HRD++ +N+L+ N + K+ADFGLA D + ++ W P
Sbjct: 115 GMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE 174
Query: 302 ELLLGATYYGTAVDLWSTGCILAELYA-GKPIMPGRTEVEQLHKI 345
L G + D+WS G +L EL G+ PG E L ++
Sbjct: 175 AALYGR--FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 217
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 98/202 (48%), Gaps = 14/202 (6%)
Query: 138 IGQ-GTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINVIKLEG 196
IG+ G + VY+A++ + + A K + D E + EI IL DH N++KL
Sbjct: 17 IGELGDFGKVYKAQNKETSVLAAAKVI--DTKSEEELEDYMVEIDILASCDHPNIVKL-- 72
Query: 197 LVTSRMSCSLYLVFEYME---HDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVL 253
L +L+++ E+ D L L S+ QV C +Q L L++ H ++
Sbjct: 73 LDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVC--KQTLDALNYLHDNKII 130
Query: 254 HRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGATY---- 309
HRD+K N+L +G +K+ADFG+++ Q S + T ++ PE+++ T
Sbjct: 131 HRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMCETSKDRP 190
Query: 310 YGTAVDLWSTGCILAELYAGKP 331
Y D+WS G L E+ +P
Sbjct: 191 YDYKADVWSLGITLIEMAEIEP 212
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 99/209 (47%), Gaps = 28/209 (13%)
Query: 132 FEKLDKIGQGTYSNV-----------YRARDLDQKKIVALKKVRFDNLEPESVRFMAREI 180
F+ L +G G++ V Y + L ++ +V LK+V N E R M
Sbjct: 8 FQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDE----RLM---- 59
Query: 181 HILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQL 240
L + H +I++ G T + + ++++ +Y+E +F K Y ++
Sbjct: 60 --LSIVTHPFIIRMWG--TFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEV 115
Query: 241 LCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRP 300
L++ HS+ +++RD+K N+L+D NG +KI DFG A Y PD L T Y
Sbjct: 116 CLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAK-YVPDVTYXLCG---TPDYIA 171
Query: 301 PELLLGATYYGTAVDLWSTGCILAELYAG 329
PE ++ Y ++D WS G ++ E+ AG
Sbjct: 172 PE-VVSTKPYNKSIDWWSFGILIYEMLAG 199
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 112/225 (49%), Gaps = 15/225 (6%)
Query: 125 VPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILR 184
+PR + EK K+G G + V+ A ++ VA+K ++ ++ E+ F+A E ++++
Sbjct: 185 IPRESLKLEK--KLGAGQFGEVWMA-TYNKHTKVAVKTMKPGSMSVEA--FLA-EANVMK 238
Query: 185 RLDHINVIKLEGLVTSRMSCSLYLVFEYMEHD--LAGLASHPGLKFSEAQVKCYMQQLLC 242
L H ++KL +VT +Y++ E+M L L S G K ++ + Q+
Sbjct: 239 TLQHDKLVKLHAVVTKE---PIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAE 295
Query: 243 GLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLT-SRVVTLWYRPP 301
G+ R +HRD++ +N+L+ + + KIADFGLA + ++ ++ W P
Sbjct: 296 GMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPE 355
Query: 302 ELLLGATYYGTAVDLWSTGCILAELYA-GKPIMPGRTEVEQLHKI 345
+ G+ + D+WS G +L E+ G+ PG + E + +
Sbjct: 356 AINFGS--FTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRAL 398
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 107/239 (44%), Gaps = 29/239 (12%)
Query: 136 DKIGQGTYSNVYRARDLDQKKIVALKKVRFDN---LEPESVRFMAREIHILRRLDHINVI 192
D +GQG +NV+R R + A+K F+N L P V+ RE +L++L+H N++
Sbjct: 15 DILGQGATANVFRGRHKKTGDLFAIKV--FNNISFLRPVDVQM--REFEVLKKLNHKNIV 70
Query: 193 KLEGLVTSRMSCSLYLVFEYME-HDLAGLASHPGLKFS--EAQVKCYMQQLLCGLDHCHS 249
KL + + L+ E+ L + P + E++ ++ ++ G++H
Sbjct: 71 KLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRE 130
Query: 250 RGVLHRDIKGSNLL----IDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLL 305
G++HR+IK N++ D + K+ DFG A + D+ S T Y P++
Sbjct: 131 NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQ--FVSLYGTEEYLHPDMYE 188
Query: 306 GATY-------YGTAVDLWSTGCILAELYAG----KPIMPGRTEVEQLHKIFKLCGSPS 353
A YG VDLWS G G +P R E ++KI + G PS
Sbjct: 189 RAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKI--ITGKPS 245
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 95/202 (47%), Gaps = 12/202 (5%)
Query: 135 LDKIGQGTYSNV----YRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHIN 190
+ ++G+G + +V Y + +VA+K+++ P+ R REI IL+ L
Sbjct: 15 ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSG--PDQQRDFQREIQILKALHSDF 72
Query: 191 VIKLEGLVTSRMSCSLYLVFEYMEHD-LAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHS 249
++K G+ SL LV EY+ L + +++ Y Q+ G+++ S
Sbjct: 73 IVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGS 132
Query: 250 RGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLT---SRVVTLWYRPPELLLG 306
R +HRD+ N+L+++ +KIADFGLA D++ + + WY P L
Sbjct: 133 RRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPES--LS 190
Query: 307 ATYYGTAVDLWSTGCILAELYA 328
+ D+WS G +L EL+
Sbjct: 191 DNIFSRQSDVWSFGVVLYELFT 212
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 104/215 (48%), Gaps = 13/215 (6%)
Query: 135 LDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINVIKL 194
+ +IG G + V+ L++ K VA+K +R + E E ++ +L H +++L
Sbjct: 10 VQEIGSGQFGLVHLGYWLNKDK-VAIKTIREGAMSEED---FIEEAEVMMKLSHPKLVQL 65
Query: 195 EGLVTSRMSCSLYLVFEYMEHDLAG--LASHPGLKFSEAQVKCYMQQLLC-GLDHCHSRG 251
G+ + + LVFE+MEH L + GL +E + + +C G+ +
Sbjct: 66 YGVCLEQ--APICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLD--VCEGMAYLEEAC 121
Query: 252 VLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGATYYG 311
V+HRD+ N L+ N ++K++DFG+ F DQ T + + PE + + Y
Sbjct: 122 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPE-VFSFSRYS 180
Query: 312 TAVDLWSTGCILAELYA-GKPIMPGRTEVEQLHKI 345
+ D+WS G ++ E+++ GK R+ E + I
Sbjct: 181 SKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI 215
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 103/225 (45%), Gaps = 15/225 (6%)
Query: 125 VPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILR 184
+PR + E K+GQG + V+ + VA+K ++ + PE+ +E +++
Sbjct: 15 IPRESLRLEV--KLGQGCFGEVWMG-TWNGTTRVAIKTLKPGTMSPEA---FLQEAQVMK 68
Query: 185 RLDHINVIKLEGLVTSRMSCSLYLVFEYMEHD--LAGLASHPGLKFSEAQVKCYMQQLLC 242
++ H +++L +V+ +Y+V EYM L L G Q+ Q+
Sbjct: 69 KIRHEKLVQLYAVVSEE---PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIAS 125
Query: 243 GLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFY-DPDQNQPLTSRVVTLWYRPP 301
G+ + +HRD++ +N+L+ N + K+ADFGLA D + ++ W P
Sbjct: 126 GMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE 185
Query: 302 ELLLGATYYGTAVDLWSTGCILAELYA-GKPIMPGRTEVEQLHKI 345
L G + D+WS G +L EL G+ PG E L ++
Sbjct: 186 AALYGR--FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 228
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 95/202 (47%), Gaps = 12/202 (5%)
Query: 135 LDKIGQGTYSNV----YRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHIN 190
+ ++G+G + +V Y + +VA+K+++ P+ R REI IL+ L
Sbjct: 16 ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSG--PDQQRDFQREIQILKALHSDF 73
Query: 191 VIKLEGLVTSRMSCSLYLVFEYMEHD-LAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHS 249
++K G+ SL LV EY+ L + +++ Y Q+ G+++ S
Sbjct: 74 IVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGS 133
Query: 250 RGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLT---SRVVTLWYRPPELLLG 306
R +HRD+ N+L+++ +KIADFGLA D++ + + WY P L
Sbjct: 134 RRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPES--LS 191
Query: 307 ATYYGTAVDLWSTGCILAELYA 328
+ D+WS G +L EL+
Sbjct: 192 DNIFSRQSDVWSFGVVLYELFT 213
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 111/225 (49%), Gaps = 15/225 (6%)
Query: 125 VPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILR 184
+PR + EK K+G G + V+ A K VA+K ++ ++ E+ F+A E ++++
Sbjct: 12 IPRESLKLEK--KLGAGQFGEVWMATYNKHTK-VAVKTMKPGSMSVEA--FLA-EANVMK 65
Query: 185 RLDHINVIKLEGLVTSRMSCSLYLVFEYMEHD--LAGLASHPGLKFSEAQVKCYMQQLLC 242
L H ++KL +VT +Y++ E+M L L S G K ++ + Q+
Sbjct: 66 TLQHDKLVKLHAVVTKE---PIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAE 122
Query: 243 GLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLT-SRVVTLWYRPP 301
G+ R +HRD++ +N+L+ + + KIADFGLA + ++ ++ W P
Sbjct: 123 GMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPE 182
Query: 302 ELLLGATYYGTAVDLWSTGCILAELYA-GKPIMPGRTEVEQLHKI 345
+ G+ + D+WS G +L E+ G+ PG + E + +
Sbjct: 183 AINFGS--FTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRAL 225
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 108/230 (46%), Gaps = 21/230 (9%)
Query: 132 FEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHIN- 190
+ L +IG G S V++ + ++K+I A+K V + + +++ EI L +L +
Sbjct: 58 YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 116
Query: 191 -VIKLEGL-VTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCH 248
+I+L +T + +Y+V E DL + K Y + +L + H
Sbjct: 117 KIIRLYDYEITDQY---IYMVMECGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIH 172
Query: 249 SRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLT-SRVVTLWYRPPELLLGA 307
G++H D+K +N LI +G+LK+ DFG+A+ PD + S+V T+ Y PPE +
Sbjct: 173 QHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDM 231
Query: 308 T----------YYGTAVDLWSTGCILAELYAGK-PIMPGRTEVEQLHKIF 346
+ D+WS GCIL + GK P ++ +LH I
Sbjct: 232 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAII 281
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 120/286 (41%), Gaps = 37/286 (12%)
Query: 131 SFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNL-EPESVRFMAREIHILRRLDHI 189
+ K + +G G + V++ + +A K ++ + + E V+ EI ++ +LDH
Sbjct: 90 TVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVK---NEISVMNQLDHA 146
Query: 190 NVIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCH 248
N+I+L S+ + LV EY++ +L +E +M+Q+ G+ H H
Sbjct: 147 NLIQLYDAFESK--NDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMH 204
Query: 249 SRGVLHRDIKGSNLLIDNNGI--LKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLG 306
+LH D+K N+L N +KI DFGLA Y P + L T + PE ++
Sbjct: 205 QMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKP--REKLKVNFGTPEFLAPE-VVN 261
Query: 307 ATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSKLPHAT 366
+ D+WS G I L +G G + E L+ I C ED
Sbjct: 262 YDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILA-CRWDLED----------- 309
Query: 367 IFKPQQPYKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALR 412
E F+D A + LL + + R SA+ AL+
Sbjct: 310 -------------EEFQDISEEAKEFISKLLIKEKSWRISASEALK 342
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 102/225 (45%), Gaps = 15/225 (6%)
Query: 125 VPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILR 184
+PR + E K+GQG + V+ + VA+K ++ + PE+ +E +++
Sbjct: 15 IPRESLRLEV--KLGQGCFGEVWMG-TWNGTTRVAIKTLKPGTMSPEA---FLQEAQVMK 68
Query: 185 RLDHINVIKLEGLVTSRMSCSLYLVFEYMEHD--LAGLASHPGLKFSEAQVKCYMQQLLC 242
+L H +++L +V+ +Y+V EYM L L G Q+ Q+
Sbjct: 69 KLRHEKLVQLYAVVSEE---PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIAS 125
Query: 243 GLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFY-DPDQNQPLTSRVVTLWYRPP 301
G+ + +HRD+ +N+L+ N + K+ADFGLA D + ++ W P
Sbjct: 126 GMAYVERMNYVHRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE 185
Query: 302 ELLLGATYYGTAVDLWSTGCILAELYA-GKPIMPGRTEVEQLHKI 345
L G + D+WS G +L EL G+ PG E L ++
Sbjct: 186 AALYGR--FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 228
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 95/202 (47%), Gaps = 12/202 (5%)
Query: 135 LDKIGQGTYSNV----YRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHIN 190
+ ++G+G + +V Y + +VA+K+++ P+ R REI IL+ L
Sbjct: 28 ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSG--PDQQRDFQREIQILKALHSDF 85
Query: 191 VIKLEGLVTSRMSCSLYLVFEYMEHD-LAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHS 249
++K G+ SL LV EY+ L + +++ Y Q+ G+++ S
Sbjct: 86 IVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGS 145
Query: 250 RGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLT---SRVVTLWYRPPELLLG 306
R +HRD+ N+L+++ +KIADFGLA D++ + + WY P L
Sbjct: 146 RRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPES--LS 203
Query: 307 ATYYGTAVDLWSTGCILAELYA 328
+ D+WS G +L EL+
Sbjct: 204 DNIFSRQSDVWSFGVVLYELFT 225
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 102/217 (47%), Gaps = 8/217 (3%)
Query: 129 ADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPES--VRFMAREIHILRRL 186
+D +E + +G G S V+ ARDL + VA+K +R D S +RF RE L
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFR-REAQNAAAL 69
Query: 187 DHINVIKL--EGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGL 244
+H ++ + G + Y+V EY++ H + + + L
Sbjct: 70 NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQAL 129
Query: 245 DHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLA-SFYDPDQNQPLTSRVV-TLWYRPPE 302
+ H G++HRD+K +N+LI +K+ DFG+A + D + T+ V+ T Y PE
Sbjct: 130 NFSHQNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPE 189
Query: 303 LLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEV 339
G + + D++S GC+L E+ G+P G + V
Sbjct: 190 QARGDSVDARS-DVYSLGCVLYEVLTGEPPFTGDSPV 225
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 119/255 (46%), Gaps = 26/255 (10%)
Query: 137 KIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINVIKLEG 196
+IG G++ VY+ + VA+K + P+ ++ E+ +LR+ H+N++ G
Sbjct: 31 RIGSGSFGTVYKGK---WHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 87
Query: 197 LVTSRMSCSLYLVFEYMEHDLAGLASHPG-LKFSEAQVKCYMQQLLCGLDHCHSRGVLHR 255
T+ L +V ++ E H KF ++ +Q G+D+ H++ ++HR
Sbjct: 88 YSTA---PQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHR 144
Query: 256 DIKGSNLLIDNNGILKIADFGLAS----FYDPDQNQPLTSRVVTLWYRPPEL-LLGATYY 310
D+K +N+ + + +KI DFGLA+ + Q + L+ + LW P + + + Y
Sbjct: 145 DLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSI--LWMAPEVIRMQDSNPY 202
Query: 311 GTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSKLPHATIFKP 370
D+++ G +L EL G+ +P + + +I ++ G R S P + +
Sbjct: 203 SFQSDVYAFGIVLYELMTGQ--LP-YSNINNRDQIIEMVG-------RGSLSPDLSKVRS 252
Query: 371 QQP--YKRCVAETFK 383
P KR +AE K
Sbjct: 253 NCPKRMKRLMAECLK 267
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 110/224 (49%), Gaps = 23/224 (10%)
Query: 125 VPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILR 184
+PR + EK K+G G + V+ A ++ VA+K ++ ++ E+ F+A E ++++
Sbjct: 179 IPRESLKLEK--KLGAGQFGEVWMA-TYNKHTKVAVKTMKPGSMSVEA--FLA-EANVMK 232
Query: 185 RLDHINVIKLEGLVTSRMSCSLYLVFEYMEHD--LAGLASHPGLKFSEAQVKCYMQQLLC 242
L H ++KL +VT +Y++ E+M L L S G K ++ + Q+
Sbjct: 233 TLQHDKLVKLHAVVTKE---PIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAE 289
Query: 243 GLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPE 302
G+ R +HRD++ +N+L+ + + KIADFGLA + ++ W P
Sbjct: 290 GMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLAR---------VGAKFPIKWTAPEA 340
Query: 303 LLLGATYYGTAVDLWSTGCILAELYA-GKPIMPGRTEVEQLHKI 345
+ G+ + D+WS G +L E+ G+ PG + E + +
Sbjct: 341 INFGS--FTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRAL 382
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 104/203 (51%), Gaps = 13/203 (6%)
Query: 138 IGQGTYSNVYRA---RDLDQKKI-VALKKVRFDNLEPESVRFMAREIHILRRLDHINVIK 193
IG G + VY+ +K++ VA+K ++ E + V F+ E I+ + H N+I+
Sbjct: 52 IGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLG-EAGIMGQFSHHNIIR 110
Query: 194 LEGLVTSRMSCSLYLVFEYMEHD-LAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGV 252
LEG+++ + ++ EYME+ L +FS Q+ ++ + G+ + +
Sbjct: 111 LEGVISKYKP--MMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNY 168
Query: 253 LHRDIKGSNLLIDNNGILKIADFGLASFY--DPDQNQPLTSRVVTLWYRPPELLLGATYY 310
+HRD+ N+L+++N + K++DFGL+ DP+ + + + + PE + +
Sbjct: 169 VHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPE-AISYRKF 227
Query: 311 GTAVDLWSTGCILAEL--YAGKP 331
+A D+WS G ++ E+ Y +P
Sbjct: 228 TSASDVWSFGIVMWEVMTYGERP 250
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 100/203 (49%), Gaps = 20/203 (9%)
Query: 137 KIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINVIKLEG 196
+IG G++ VY+ + VA+K ++ + PE + E+ +LR+ H+N++ G
Sbjct: 43 RIGSGSFGTVYKGK---WHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMG 99
Query: 197 LVTSRMSCSLYLVFEYMEHDLAGLASHPGL---KFSEAQVKCYMQQLLCGLDHCHSRGVL 253
+T +L +V ++ E + L H + KF Q+ +Q G+D+ H++ ++
Sbjct: 100 YMTKD---NLAIVTQWCEG--SSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNII 154
Query: 254 HRDIKGSNLLIDNNGILKIADFGLASF---YDPDQN--QPLTSRVVTLWYRPPELLLGAT 308
HRD+K +N+ + +KI DFGLA+ + Q QP S LW P + +
Sbjct: 155 HRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGS---VLWMAPEVIRMQDN 211
Query: 309 Y-YGTAVDLWSTGCILAELYAGK 330
+ D++S G +L EL G+
Sbjct: 212 NPFSFQSDVYSYGIVLYELMTGE 234
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 115/269 (42%), Gaps = 48/269 (17%)
Query: 119 EAIQGWVPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAR 178
E + VP+ ++ F+ DKIG+GT+S+VY A Q ++ +K+ +L P S
Sbjct: 10 EKLYEAVPQLSNVFKIEDKIGEGTFSSVYLATA--QLQVGPEEKIALKHLIPTS-----H 62
Query: 179 EIHILRRLDHINVIKLEGLVTSRMSC-----SLYLVFEYMEHDLAGLASHPGLKFSEAQV 233
I I L + V + V C + + Y+EH+ + L L F E V
Sbjct: 63 PIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIAMPYLEHE-SFLDILNSLSFQE--V 119
Query: 234 KCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILK---IADFGLAS----------- 279
+ YM L L H G++HRD+K SN L + LK + DFGLA
Sbjct: 120 REYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRR--LKKYALVDFGLAQGTHDTKIELLK 177
Query: 280 FYDPD-------QN---------QPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCIL 323
F + QN Q + R T +R PE+L TA+D+WS G I
Sbjct: 178 FVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIF 237
Query: 324 AELYAGK-PIMPGRTEVEQLHKIFKLCGS 351
L +G+ P ++ L +I + GS
Sbjct: 238 LSLLSGRYPFYKASDDLTALAQIMTIRGS 266
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 100/202 (49%), Gaps = 11/202 (5%)
Query: 132 FEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDN------LEPESVRFMAREIHILRR 185
+ + +G G + V+ A D ++ K V +K ++ + +E + + EI IL R
Sbjct: 26 YSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSR 85
Query: 186 LDHINVIKLEGLVTSRMSCSLYLVFEYMEHDL-AGLASHPGLKFSEAQVKCYMQQLLCGL 244
++H N+IK+ + ++ L + DL A + HP + E +QL+ +
Sbjct: 86 VEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHP--RLDEPLASYIFRQLVSAV 143
Query: 245 DHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELL 304
+ + ++HRDIK N++I + +K+ DFG A++ ++ + + T+ Y PE+L
Sbjct: 144 GYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYL--ERGKLFYTFCGTIEYCAPEVL 201
Query: 305 LGATYYGTAVDLWSTGCILAEL 326
+G Y G +++WS G L L
Sbjct: 202 MGNPYRGPELEMWSLGVTLYTL 223
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 94/202 (46%), Gaps = 17/202 (8%)
Query: 138 IGQGTYSNVYRARDLDQKKIVALKKVRFDNLE-----PESVRFMAREIHILRRLD--HIN 190
+G G + +VY + VA+K V D + P R + E+ +L+++
Sbjct: 51 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFSG 109
Query: 191 VIKLEGLVTSRMSCSLYLVFEYME--HDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCH 248
VI+L L S L+ E E DL + G E + + Q+L + HCH
Sbjct: 110 VIRL--LDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCH 166
Query: 249 SRGVLHRDIKGSNLLID-NNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGA 307
+ GVLHRDIK N+LID N G LK+ DFG + ++ T T Y PPE +
Sbjct: 167 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYH 223
Query: 308 TYYGTAVDLWSTGCILAELYAG 329
Y+G + +WS G +L ++ G
Sbjct: 224 RYHGRSAAVWSLGILLYDMVCG 245
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 114/258 (44%), Gaps = 40/258 (15%)
Query: 176 MAREIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEA---- 231
E+ I+ + + + EG++T+ +Y+++EYME+D LKF E
Sbjct: 90 FKNELQIITDIKNEYCLTCEGIITNYDE--VYIIYEYMEND-------SILKFDEYFFVL 140
Query: 232 -----------QVKCYMQQLLCGLDHCHS-RGVLHRDIKGSNLLIDNNGILKIADFGLAS 279
+KC ++ +L + H+ + + HRD+K SN+L+D NG +K++DFG +
Sbjct: 141 DKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDFGESE 200
Query: 280 FYDPDQNQPLTSRVVTLWYRPPELLLG-ATYYGTAVDLWSTG-CILAELYAGKPIMPGRT 337
+ ++ + T + PPE ++Y G VD+WS G C+ Y P +
Sbjct: 201 YM---VDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKIS 257
Query: 338 EVEQLHKIFKLCGSPSEDYWRKSKLPHATIFKPQQPYKRCVAETFKDFPAPALALMETLL 397
VE + I + + +Y L P K + F + ++ L
Sbjct: 258 LVELFNNI----RTKNIEY----PLDRNHFLYPLTNKKSTCSNNF--LSNEDIDFLKLFL 307
Query: 398 SIDPADRGSAASALRSEF 415
+PA+R ++ AL+ E+
Sbjct: 308 RKNPAERITSEDALKHEW 325
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 118/255 (46%), Gaps = 26/255 (10%)
Query: 137 KIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINVIKLEG 196
+IG G++ VY+ + VA+K + P+ ++ E+ +LR+ H+N++ G
Sbjct: 31 RIGSGSFGTVYKGK---WHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 87
Query: 197 LVTSRMSCSLYLVFEYMEHDLAGLASHPG-LKFSEAQVKCYMQQLLCGLDHCHSRGVLHR 255
T L +V ++ E H KF ++ +Q G+D+ H++ ++HR
Sbjct: 88 YSTK---PQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHR 144
Query: 256 DIKGSNLLIDNNGILKIADFGLAS----FYDPDQNQPLTSRVVTLWYRPPEL-LLGATYY 310
D+K +N+ + + +KI DFGLA+ + Q + L+ + LW P + + + Y
Sbjct: 145 DLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSI--LWMAPEVIRMQDSNPY 202
Query: 311 GTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSKLPHATIFKP 370
D+++ G +L EL G+ +P + + +I ++ G R S P + +
Sbjct: 203 SFQSDVYAFGIVLYELMTGQ--LP-YSNINNRDQIIEMVG-------RGSLSPDLSKVRS 252
Query: 371 QQP--YKRCVAETFK 383
P KR +AE K
Sbjct: 253 NCPKRMKRLMAECLK 267
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 100/223 (44%), Gaps = 19/223 (8%)
Query: 131 SFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRL-DHI 189
SF++L ++G G+Y V++ R + ++ A+K+ P+ E+ ++ H
Sbjct: 58 SFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHP 117
Query: 190 NVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHS 249
++LE LYL E L G EAQV Y++ L L H HS
Sbjct: 118 CCVRLE--QAWEEGGILYLQTELCGPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHS 175
Query: 250 RGVLHRDIKGSNLLIDNNGILKIADFGL------ASFYDPDQNQPLTSRVVTLWYRPPEL 303
+G++H D+K +N+ + G K+ DFGL A + + P Y PEL
Sbjct: 176 QGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQEGDPR--------YMAPEL 227
Query: 304 LLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIF 346
L G+ YGTA D++S G + E+ + G +QL + +
Sbjct: 228 LQGS--YGTAADVFSLGLTILEVACNMELPHGGEGWQQLRQGY 268
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 94/202 (46%), Gaps = 17/202 (8%)
Query: 138 IGQGTYSNVYRARDLDQKKIVALKKVRFDNLE-----PESVRFMAREIHILRRLD--HIN 190
+G G + +VY + VA+K V D + P R + E+ +L+++
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFSG 75
Query: 191 VIKLEGLVTSRMSCSLYLVFEYME--HDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCH 248
VI+L L S L+ E E DL + G E + + Q+L + HCH
Sbjct: 76 VIRL--LDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCH 132
Query: 249 SRGVLHRDIKGSNLLID-NNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGA 307
+ GVLHRDIK N+LID N G LK+ DFG + ++ T T Y PPE +
Sbjct: 133 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYH 189
Query: 308 TYYGTAVDLWSTGCILAELYAG 329
Y+G + +WS G +L ++ G
Sbjct: 190 RYHGRSAAVWSLGILLYDMVCG 211
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 94/202 (46%), Gaps = 17/202 (8%)
Query: 138 IGQGTYSNVYRARDLDQKKIVALKKVRFDNLE-----PESVRFMAREIHILRRLD--HIN 190
+G G + +VY + VA+K V D + P R + E+ +L+++
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFSG 90
Query: 191 VIKLEGLVTSRMSCSLYLVFEYME--HDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCH 248
VI+L L S L+ E E DL + G E + + Q+L + HCH
Sbjct: 91 VIRL--LDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCH 147
Query: 249 SRGVLHRDIKGSNLLID-NNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGA 307
+ GVLHRDIK N+LID N G LK+ DFG + ++ T T Y PPE +
Sbjct: 148 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYH 204
Query: 308 TYYGTAVDLWSTGCILAELYAG 329
Y+G + +WS G +L ++ G
Sbjct: 205 RYHGRSAAVWSLGILLYDMVCG 226
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 94/202 (46%), Gaps = 17/202 (8%)
Query: 138 IGQGTYSNVYRARDLDQKKIVALKKVRFDNLE-----PESVRFMAREIHILRRLD--HIN 190
+G G + +VY + VA+K V D + P R + E+ +L+++
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFSG 90
Query: 191 VIKLEGLVTSRMSCSLYLVFEYME--HDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCH 248
VI+L L S L+ E E DL + G E + + Q+L + HCH
Sbjct: 91 VIRL--LDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCH 147
Query: 249 SRGVLHRDIKGSNLLID-NNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGA 307
+ GVLHRDIK N+LID N G LK+ DFG + ++ T T Y PPE +
Sbjct: 148 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYH 204
Query: 308 TYYGTAVDLWSTGCILAELYAG 329
Y+G + +WS G +L ++ G
Sbjct: 205 RYHGRSAAVWSLGILLYDMVCG 226
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 94/202 (46%), Gaps = 17/202 (8%)
Query: 138 IGQGTYSNVYRARDLDQKKIVALKKVRFDNLE-----PESVRFMAREIHILRRLD--HIN 190
+G G + +VY + VA+K V D + P R + E+ +L+++
Sbjct: 31 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFSG 89
Query: 191 VIKLEGLVTSRMSCSLYLVFEYME--HDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCH 248
VI+L L S L+ E E DL + G E + + Q+L + HCH
Sbjct: 90 VIRL--LDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCH 146
Query: 249 SRGVLHRDIKGSNLLID-NNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGA 307
+ GVLHRDIK N+LID N G LK+ DFG + ++ T T Y PPE +
Sbjct: 147 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYH 203
Query: 308 TYYGTAVDLWSTGCILAELYAG 329
Y+G + +WS G +L ++ G
Sbjct: 204 RYHGRSAAVWSLGILLYDMVCG 225
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 127/290 (43%), Gaps = 46/290 (15%)
Query: 137 KIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINVIKLEG 196
K+G G + +V+ + +K + D + + A EI +L+ LDH N+IK+
Sbjct: 29 KLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEA-EIEVLKSLDHPNIIKIFE 87
Query: 197 LVTSRMSCSLYLVFEYME--HDLAGLASHP--GLKFSEAQVKCYMQQLLCGLDHCHSRGV 252
+ + +Y+V E E L + S G SE V M+Q++ L + HS+ V
Sbjct: 88 VFEDYHN--MYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHV 145
Query: 253 LHRDIKGSNLLIDN---NGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGATY 309
+H+D+K N+L + + +KI DFGLA + D++ T+ T Y PE+
Sbjct: 146 VHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHS--TNAAGTALYMAPEVFKRDVT 203
Query: 310 YGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSKLP---HAT 366
+ D+WS G ++ L G +P G+ E+ +K+ +A
Sbjct: 204 F--KCDIWSAGVVMYFLLTG--CLP-------------FTGTSLEEVQQKATYKEPNYAV 246
Query: 367 IFKPQQPYKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALRSEFF 416
+P P A+ L++ +L+ DP R SAA L E+F
Sbjct: 247 ECRPLTP--------------QAVDLLKQMLTKDPERRPSAAQVLHHEWF 282
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 94/202 (46%), Gaps = 17/202 (8%)
Query: 138 IGQGTYSNVYRARDLDQKKIVALKKVRFDNLE-----PESVRFMAREIHILRRLD--HIN 190
+G G + +VY + VA+K V D + P R + E+ +L+++
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFSG 90
Query: 191 VIKLEGLVTSRMSCSLYLVFEYME--HDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCH 248
VI+L L S L+ E E DL + G E + + Q+L + HCH
Sbjct: 91 VIRL--LDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCH 147
Query: 249 SRGVLHRDIKGSNLLID-NNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGA 307
+ GVLHRDIK N+LID N G LK+ DFG + ++ T T Y PPE +
Sbjct: 148 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYH 204
Query: 308 TYYGTAVDLWSTGCILAELYAG 329
Y+G + +WS G +L ++ G
Sbjct: 205 RYHGRSAAVWSLGILLYDMVCG 226
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 94/202 (46%), Gaps = 17/202 (8%)
Query: 138 IGQGTYSNVYRARDLDQKKIVALKKVRFDNLE-----PESVRFMAREIHILRRLD--HIN 190
+G G + +VY + VA+K V D + P R + E+ +L+++
Sbjct: 31 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFSG 89
Query: 191 VIKLEGLVTSRMSCSLYLVFEYME--HDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCH 248
VI+L L S L+ E E DL + G E + + Q+L + HCH
Sbjct: 90 VIRL--LDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCH 146
Query: 249 SRGVLHRDIKGSNLLID-NNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGA 307
+ GVLHRDIK N+LID N G LK+ DFG + ++ T T Y PPE +
Sbjct: 147 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYH 203
Query: 308 TYYGTAVDLWSTGCILAELYAG 329
Y+G + +WS G +L ++ G
Sbjct: 204 RYHGRSAAVWSLGILLYDMVCG 225
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 108/230 (46%), Gaps = 21/230 (9%)
Query: 132 FEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHIN- 190
+ L +IG G S V++ + ++K+I A+K V + + +++ EI L +L +
Sbjct: 11 YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 69
Query: 191 -VIKLEGL-VTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCH 248
+I+L +T + +Y+V E DL + K Y + +L + H
Sbjct: 70 KIIRLYDYEITDQY---IYMVMECGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIH 125
Query: 249 SRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLT-SRVVTLWYRPPELLLGA 307
G++H D+K +N LI +G+LK+ DFG+A+ PD + S+V T+ Y PPE +
Sbjct: 126 QHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDM 184
Query: 308 T----------YYGTAVDLWSTGCILAELYAGK-PIMPGRTEVEQLHKIF 346
+ D+WS GCIL + GK P ++ +LH I
Sbjct: 185 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAII 234
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 106/234 (45%), Gaps = 44/234 (18%)
Query: 130 DSFEKLDKIGQGTYSNVYRARD-----LDQKKIVALKKVRFDNLEPESVRFMAREIHILR 184
++ E + IG+G + V++AR + +VA+K ++ + F RE ++
Sbjct: 47 NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQ-REAALMA 105
Query: 185 RLDHINVIKLEGLVTSRMSCSLYLVFEYME-------------HDLAGLA---------- 221
D+ N++KL G+ + + L+FEYM H + L+
Sbjct: 106 EFDNPNIVKLLGVCA--VGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARV 163
Query: 222 SHPGLK-FSEAQVKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGL--- 277
S PG S A+ C +Q+ G+ + R +HRD+ N L+ N ++KIADFGL
Sbjct: 164 SSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRN 223
Query: 278 ---ASFYDPDQNQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYA 328
A +Y D N + R + PPE + Y T D+W+ G +L E+++
Sbjct: 224 IYSADYYKADGNDAIPIR-----WMPPESIF-YNRYTTESDVWAYGVVLWEIFS 271
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 93/183 (50%), Gaps = 13/183 (7%)
Query: 157 IVALKKVRFDNLEPESVRFMAREIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEH- 215
VA+K ++ E + F++ E I+ + DH NVI LEG+VT S + ++ E+ME+
Sbjct: 37 FVAIKTLKSGYTEKQRRDFLS-EASIMGQFDHPNVIHLEGVVTK--STPVMIITEFMENG 93
Query: 216 DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADF 275
L +F+ Q+ ++ + G+ + +HR + N+L+++N + K++DF
Sbjct: 94 SLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRALAARNILVNSNLVCKVSDF 153
Query: 276 GLASFYDPDQNQP-----LTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAEL--YA 328
GL+ F + D + P L ++ W P + + +A D+WS G ++ E+ Y
Sbjct: 154 GLSRFLEDDTSDPTYTSALGGKIPIRWTAPEA--IQYRKFTSASDVWSYGIVMWEVMSYG 211
Query: 329 GKP 331
+P
Sbjct: 212 ERP 214
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 100/204 (49%), Gaps = 21/204 (10%)
Query: 138 IGQGTYSNVYRARDLDQKKIVALKK-VRFDNLEPESVRFMAREIHILRRLDHINVIKLEG 196
+G+G + + + +++ +K+ +RFD E+ R +E+ ++R L+H NV+K G
Sbjct: 18 LGKGCFGQAIKVTHRETGEVMVMKELIRFDE---ETQRTFLKEVKVMRCLEHPNVLKFIG 74
Query: 197 LVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVLHR 255
++ L + EY++ L G+ ++ +Q + + + G+ + HS ++HR
Sbjct: 75 VLYK--DKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHR 132
Query: 256 DIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSR-------------VVTLWYRPPE 302
D+ N L+ N + +ADFGLA ++ QP R V ++ PE
Sbjct: 133 DLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPE 192
Query: 303 LLLGATYYGTAVDLWSTGCILAEL 326
++ G + Y VD++S G +L E+
Sbjct: 193 MINGRS-YDEKVDVFSFGIVLCEI 215
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 94/202 (46%), Gaps = 17/202 (8%)
Query: 138 IGQGTYSNVYRARDLDQKKIVALKKVRFDNLE-----PESVRFMAREIHILRRLD--HIN 190
+G G + +VY + VA+K V D + P R + E+ +L+++
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFSG 75
Query: 191 VIKLEGLVTSRMSCSLYLVFEYME--HDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCH 248
VI+L L S L+ E E DL + G E + + Q+L + HCH
Sbjct: 76 VIRL--LDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCH 132
Query: 249 SRGVLHRDIKGSNLLID-NNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGA 307
+ GVLHRDIK N+LID N G LK+ DFG + ++ T T Y PPE +
Sbjct: 133 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYH 189
Query: 308 TYYGTAVDLWSTGCILAELYAG 329
Y+G + +WS G +L ++ G
Sbjct: 190 RYHGRSAAVWSLGILLYDMVCG 211
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 94/202 (46%), Gaps = 17/202 (8%)
Query: 138 IGQGTYSNVYRARDLDQKKIVALKKVRFDNLE-----PESVRFMAREIHILRRLD--HIN 190
+G G + +VY + VA+K V D + P R + E+ +L+++
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFSG 103
Query: 191 VIKLEGLVTSRMSCSLYLVFEYME--HDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCH 248
VI+L L S L+ E E DL + G E + + Q+L + HCH
Sbjct: 104 VIRL--LDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCH 160
Query: 249 SRGVLHRDIKGSNLLID-NNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGA 307
+ GVLHRDIK N+LID N G LK+ DFG + ++ T T Y PPE +
Sbjct: 161 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYH 217
Query: 308 TYYGTAVDLWSTGCILAELYAG 329
Y+G + +WS G +L ++ G
Sbjct: 218 RYHGRSAAVWSLGILLYDMVCG 239
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 94/202 (46%), Gaps = 17/202 (8%)
Query: 138 IGQGTYSNVYRARDLDQKKIVALKKVRFDNLE-----PESVRFMAREIHILRRLD--HIN 190
+G G + +VY + VA+K V D + P R + E+ +L+++
Sbjct: 16 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFSG 74
Query: 191 VIKLEGLVTSRMSCSLYLVFEYME--HDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCH 248
VI+L L S L+ E E DL + G E + + Q+L + HCH
Sbjct: 75 VIRL--LDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCH 131
Query: 249 SRGVLHRDIKGSNLLID-NNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGA 307
+ GVLHRDIK N+LID N G LK+ DFG + ++ T T Y PPE +
Sbjct: 132 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYH 188
Query: 308 TYYGTAVDLWSTGCILAELYAG 329
Y+G + +WS G +L ++ G
Sbjct: 189 RYHGRSAAVWSLGILLYDMVCG 210
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 95/205 (46%), Gaps = 12/205 (5%)
Query: 132 FEKLDKIGQGTYSNV----YRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLD 187
+ + ++G+G + +V Y + +VA+K+++ P+ R REI IL+ L
Sbjct: 9 LKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSG--PDQQRDFQREIQILKALH 66
Query: 188 HINVIKLEGLVTSRMSCSLYLVFEYMEHD-LAGLASHPGLKFSEAQVKCYMQQLLCGLDH 246
++K G+ L LV EY+ L + +++ Y Q+ G+++
Sbjct: 67 SDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEY 126
Query: 247 CHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLT---SRVVTLWYRPPEL 303
SR +HRD+ N+L+++ +KIADFGLA D++ + + WY P
Sbjct: 127 LGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPES- 185
Query: 304 LLGATYYGTAVDLWSTGCILAELYA 328
L + D+WS G +L EL+
Sbjct: 186 -LSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 106/239 (44%), Gaps = 29/239 (12%)
Query: 136 DKIGQGTYSNVYRARDLDQKKIVALKKVRFDN---LEPESVRFMAREIHILRRLDHINVI 192
D +GQG +NV+R R + A+K F+N L P V+ RE +L++L+H N++
Sbjct: 15 DILGQGATANVFRGRHKKTGDLFAIKV--FNNISFLRPVDVQM--REFEVLKKLNHKNIV 70
Query: 193 KLEGLVTSRMSCSLYLVFEYME-HDLAGLASHPGLKFS--EAQVKCYMQQLLCGLDHCHS 249
KL + + L+ E+ L + P + E++ ++ ++ G++H
Sbjct: 71 KLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRE 130
Query: 250 RGVLHRDIKGSNLL----IDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLL 305
G++HR+IK N++ D + K+ DFG A + D+ T Y P++
Sbjct: 131 NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQ--FVXLYGTEEYLHPDMYE 188
Query: 306 GATY-------YGTAVDLWSTGCILAELYAG----KPIMPGRTEVEQLHKIFKLCGSPS 353
A YG VDLWS G G +P R E ++KI + G PS
Sbjct: 189 RAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKI--ITGKPS 245
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 94/202 (46%), Gaps = 17/202 (8%)
Query: 138 IGQGTYSNVYRARDLDQKKIVALKKVRFDNLE-----PESVRFMAREIHILRRLD--HIN 190
+G G + +VY + VA+K V D + P R + E+ +L+++
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFSG 75
Query: 191 VIKLEGLVTSRMSCSLYLVFEYME--HDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCH 248
VI+L L S L+ E E DL + G E + + Q+L + HCH
Sbjct: 76 VIRL--LDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCH 132
Query: 249 SRGVLHRDIKGSNLLID-NNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGA 307
+ GVLHRDIK N+LID N G LK+ DFG + ++ T T Y PPE +
Sbjct: 133 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYH 189
Query: 308 TYYGTAVDLWSTGCILAELYAG 329
Y+G + +WS G +L ++ G
Sbjct: 190 RYHGRSAAVWSLGILLYDMVCG 211
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 107/230 (46%), Gaps = 21/230 (9%)
Query: 132 FEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHIN- 190
+ L +IG G S V++ + ++K+I A+K V + + +++ EI L +L +
Sbjct: 58 YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 116
Query: 191 -VIKLEGL-VTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCH 248
+I+L +T + +Y+V E DL + K Y + +L + H
Sbjct: 117 KIIRLYDYEITDQY---IYMVMECGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIH 172
Query: 249 SRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLT-SRVVTLWYRPPELLLGA 307
G++H D+K +N LI +G+LK+ DFG+A+ PD + S+V + Y PPE +
Sbjct: 173 QHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDM 231
Query: 308 T----------YYGTAVDLWSTGCILAELYAGK-PIMPGRTEVEQLHKIF 346
+ D+WS GCIL + GK P ++ +LH I
Sbjct: 232 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAII 281
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 94/202 (46%), Gaps = 17/202 (8%)
Query: 138 IGQGTYSNVYRARDLDQKKIVALKKVRFDNLE-----PESVRFMAREIHILRRLD--HIN 190
+G G + +VY + VA+K V D + P R + E+ +L+++
Sbjct: 59 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFSG 117
Query: 191 VIKLEGLVTSRMSCSLYLVFEYME--HDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCH 248
VI+L L S L+ E E DL + G E + + Q+L + HCH
Sbjct: 118 VIRL--LDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCH 174
Query: 249 SRGVLHRDIKGSNLLID-NNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGA 307
+ GVLHRDIK N+LID N G LK+ DFG + ++ T T Y PPE +
Sbjct: 175 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYH 231
Query: 308 TYYGTAVDLWSTGCILAELYAG 329
Y+G + +WS G +L ++ G
Sbjct: 232 RYHGRSAAVWSLGILLYDMVCG 253
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 94/202 (46%), Gaps = 17/202 (8%)
Query: 138 IGQGTYSNVYRARDLDQKKIVALKKVRFDNLE-----PESVRFMAREIHILRRLD--HIN 190
+G G + +VY + VA+K V D + P R + E+ +L+++
Sbjct: 39 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFSG 97
Query: 191 VIKLEGLVTSRMSCSLYLVFEYME--HDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCH 248
VI+L L S L+ E E DL + G E + + Q+L + HCH
Sbjct: 98 VIRL--LDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCH 154
Query: 249 SRGVLHRDIKGSNLLID-NNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGA 307
+ GVLHRDIK N+LID N G LK+ DFG + ++ T T Y PPE +
Sbjct: 155 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYH 211
Query: 308 TYYGTAVDLWSTGCILAELYAG 329
Y+G + +WS G +L ++ G
Sbjct: 212 RYHGRSAAVWSLGILLYDMVCG 233
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 94/202 (46%), Gaps = 17/202 (8%)
Query: 138 IGQGTYSNVYRARDLDQKKIVALKKVRFDNLE-----PESVRFMAREIHILRRLD--HIN 190
+G G + +VY + VA+K V D + P R + E+ +L+++
Sbjct: 64 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFSG 122
Query: 191 VIKLEGLVTSRMSCSLYLVFEYME--HDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCH 248
VI+L L S L+ E E DL + G E + + Q+L + HCH
Sbjct: 123 VIRL--LDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCH 179
Query: 249 SRGVLHRDIKGSNLLID-NNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGA 307
+ GVLHRDIK N+LID N G LK+ DFG + ++ T T Y PPE +
Sbjct: 180 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYH 236
Query: 308 TYYGTAVDLWSTGCILAELYAG 329
Y+G + +WS G +L ++ G
Sbjct: 237 RYHGRSAAVWSLGILLYDMVCG 258
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 94/202 (46%), Gaps = 17/202 (8%)
Query: 138 IGQGTYSNVYRARDLDQKKIVALKKVRFDNLE-----PESVRFMAREIHILRRLD--HIN 190
+G G + +VY + VA+K V D + P R + E+ +L+++
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFSG 102
Query: 191 VIKLEGLVTSRMSCSLYLVFEYME--HDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCH 248
VI+L L S L+ E E DL + G E + + Q+L + HCH
Sbjct: 103 VIRL--LDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCH 159
Query: 249 SRGVLHRDIKGSNLLID-NNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGA 307
+ GVLHRDIK N+LID N G LK+ DFG + ++ T T Y PPE +
Sbjct: 160 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYH 216
Query: 308 TYYGTAVDLWSTGCILAELYAG 329
Y+G + +WS G +L ++ G
Sbjct: 217 RYHGRSAAVWSLGILLYDMVCG 238
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 102/225 (45%), Gaps = 15/225 (6%)
Query: 125 VPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILR 184
+PR + E K+GQG + V+ + VA+K ++ + PE+ +E +++
Sbjct: 5 IPRESLRLEV--KLGQGCFGEVWMG-TWNGTTRVAIKTLKPGTMSPEA---FLQEAQVMK 58
Query: 185 RLDHINVIKLEGLVTSRMSCSLYLVFEYMEHD--LAGLASHPGLKFSEAQVKCYMQQLLC 242
+L H +++L +V+ + +V EYM L L G Q+ Q+
Sbjct: 59 KLRHEKLVQLYAVVSEE---PIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIAS 115
Query: 243 GLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFY-DPDQNQPLTSRVVTLWYRPP 301
G+ + +HRD++ +N+L+ N + K+ADFGLA D + ++ W P
Sbjct: 116 GMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPE 175
Query: 302 ELLLGATYYGTAVDLWSTGCILAELYA-GKPIMPGRTEVEQLHKI 345
L G + D+WS G +L EL G+ PG E L ++
Sbjct: 176 AALYGR--FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 218
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 96/210 (45%), Gaps = 9/210 (4%)
Query: 119 EAIQGWVPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAR 178
+++ W R D K K+G G Y VY VA+K ++ D +E E +
Sbjct: 22 QSMDKWEMERTDITMK-HKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEE---FLK 77
Query: 179 EIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYM 237
E +++ + H N+++L G+ T + Y+V EYM + +L + A V YM
Sbjct: 78 EAAVMKEIKHPNLVQLLGVCT--LEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYM 135
Query: 238 -QQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTL 296
Q+ +++ + +HRD+ N L+ N ++K+ADFGL+ D +
Sbjct: 136 ATQISSAMEYLEKKNFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPI 195
Query: 297 WYRPPELLLGATYYGTAVDLWSTGCILAEL 326
+ PE L T + D+W+ G +L E+
Sbjct: 196 KWTAPESLAYNT-FSIKSDVWAFGVLLWEI 224
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 94/202 (46%), Gaps = 17/202 (8%)
Query: 138 IGQGTYSNVYRARDLDQKKIVALKKVRFDNLE-----PESVRFMAREIHILRRLD--HIN 190
+G G + +VY + VA+K V D + P R + E+ +L+++
Sbjct: 59 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFSG 117
Query: 191 VIKLEGLVTSRMSCSLYLVFEYME--HDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCH 248
VI+L L S L+ E E DL + G E + + Q+L + HCH
Sbjct: 118 VIRL--LDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCH 174
Query: 249 SRGVLHRDIKGSNLLID-NNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGA 307
+ GVLHRDIK N+LID N G LK+ DFG + ++ T T Y PPE +
Sbjct: 175 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYH 231
Query: 308 TYYGTAVDLWSTGCILAELYAG 329
Y+G + +WS G +L ++ G
Sbjct: 232 RYHGRSAAVWSLGILLYDMVCG 253
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 102/217 (47%), Gaps = 8/217 (3%)
Query: 129 ADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPES--VRFMAREIHILRRL 186
+D +E + +G G S V+ ARDL + VA+K +R D S +RF RE L
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFR-REAQNAAAL 69
Query: 187 DHINVIKL--EGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGL 244
+H ++ + G + Y+V EY++ H + + + L
Sbjct: 70 NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQAL 129
Query: 245 DHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLA-SFYDPDQNQPLTSRVV-TLWYRPPE 302
+ H G++HRD+K +N++I +K+ DFG+A + D + T+ V+ T Y PE
Sbjct: 130 NFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE 189
Query: 303 LLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEV 339
G + + D++S GC+L E+ G+P G + V
Sbjct: 190 QARGDSVDARS-DVYSLGCVLYEVLTGEPPFTGDSPV 225
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 118/255 (46%), Gaps = 26/255 (10%)
Query: 137 KIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINVIKLEG 196
+IG G++ VY+ + VA+K + P+ ++ E+ +LR+ H+N++ G
Sbjct: 19 RIGSGSFGTVYKGK---WHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 75
Query: 197 LVTSRMSCSLYLVFEYMEHDLAGLASHPG-LKFSEAQVKCYMQQLLCGLDHCHSRGVLHR 255
T L +V ++ E H KF ++ +Q G+D+ H++ ++HR
Sbjct: 76 YSTK---PQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHR 132
Query: 256 DIKGSNLLIDNNGILKIADFGLAS----FYDPDQNQPLTSRVVTLWYRPPEL-LLGATYY 310
D+K +N+ + + +KI DFGLA+ + Q + L+ + LW P + + + Y
Sbjct: 133 DLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSI--LWMAPEVIRMQDSNPY 190
Query: 311 GTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSKLPHATIFKP 370
D+++ G +L EL G+ +P + + +I ++ G R S P + +
Sbjct: 191 SFQSDVYAFGIVLYELMTGQ--LP-YSNINNRDQIIEMVG-------RGSLSPDLSKVRS 240
Query: 371 QQP--YKRCVAETFK 383
P KR +AE K
Sbjct: 241 NCPKRMKRLMAECLK 255
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 94/202 (46%), Gaps = 17/202 (8%)
Query: 138 IGQGTYSNVYRARDLDQKKIVALKKVRFDNLE-----PESVRFMAREIHILRRLD--HIN 190
+G G + +VY + VA+K V D + P R + E+ +L+++
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFSG 103
Query: 191 VIKLEGLVTSRMSCSLYLVFEYME--HDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCH 248
VI+L L S L+ E E DL + G E + + Q+L + HCH
Sbjct: 104 VIRL--LDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCH 160
Query: 249 SRGVLHRDIKGSNLLID-NNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGA 307
+ GVLHRDIK N+LID N G LK+ DFG + ++ T T Y PPE +
Sbjct: 161 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYH 217
Query: 308 TYYGTAVDLWSTGCILAELYAG 329
Y+G + +WS G +L ++ G
Sbjct: 218 RYHGRSAAVWSLGILLYDMVCG 239
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 94/202 (46%), Gaps = 17/202 (8%)
Query: 138 IGQGTYSNVYRARDLDQKKIVALKKVRFDNLE-----PESVRFMAREIHILRRLD--HIN 190
+G G + +VY + VA+K V D + P R + E+ +L+++
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFSG 102
Query: 191 VIKLEGLVTSRMSCSLYLVFEYME--HDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCH 248
VI+L L S L+ E E DL + G E + + Q+L + HCH
Sbjct: 103 VIRL--LDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCH 159
Query: 249 SRGVLHRDIKGSNLLID-NNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGA 307
+ GVLHRDIK N+LID N G LK+ DFG + ++ T T Y PPE +
Sbjct: 160 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYH 216
Query: 308 TYYGTAVDLWSTGCILAELYAG 329
Y+G + +WS G +L ++ G
Sbjct: 217 RYHGRSAAVWSLGILLYDMVCG 238
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 94/202 (46%), Gaps = 17/202 (8%)
Query: 138 IGQGTYSNVYRARDLDQKKIVALKKVRFDNLE-----PESVRFMAREIHILRRLD--HIN 190
+G G + +VY + VA+K V D + P R + E+ +L+++
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFSG 103
Query: 191 VIKLEGLVTSRMSCSLYLVFEYME--HDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCH 248
VI+L L S L+ E E DL + G E + + Q+L + HCH
Sbjct: 104 VIRL--LDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCH 160
Query: 249 SRGVLHRDIKGSNLLID-NNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGA 307
+ GVLHRDIK N+LID N G LK+ DFG + ++ T T Y PPE +
Sbjct: 161 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYH 217
Query: 308 TYYGTAVDLWSTGCILAELYAG 329
Y+G + +WS G +L ++ G
Sbjct: 218 RYHGRSAAVWSLGILLYDMVCG 239
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 94/202 (46%), Gaps = 17/202 (8%)
Query: 138 IGQGTYSNVYRARDLDQKKIVALKKVRFDNLE-----PESVRFMAREIHILRRLD--HIN 190
+G G + +VY + VA+K V D + P R + E+ +L+++
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFSG 103
Query: 191 VIKLEGLVTSRMSCSLYLVFEYME--HDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCH 248
VI+L L S L+ E E DL + G E + + Q+L + HCH
Sbjct: 104 VIRL--LDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCH 160
Query: 249 SRGVLHRDIKGSNLLID-NNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGA 307
+ GVLHRDIK N+LID N G LK+ DFG + ++ T T Y PPE +
Sbjct: 161 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYH 217
Query: 308 TYYGTAVDLWSTGCILAELYAG 329
Y+G + +WS G +L ++ G
Sbjct: 218 RYHGRSAAVWSLGILLYDMVCG 239
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 94/202 (46%), Gaps = 17/202 (8%)
Query: 138 IGQGTYSNVYRARDLDQKKIVALKKVRFDNLE-----PESVRFMAREIHILRRLD--HIN 190
+G G + +VY + VA+K V D + P R + E+ +L+++
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFSG 102
Query: 191 VIKLEGLVTSRMSCSLYLVFEYME--HDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCH 248
VI+L L S L+ E E DL + G E + + Q+L + HCH
Sbjct: 103 VIRL--LDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCH 159
Query: 249 SRGVLHRDIKGSNLLID-NNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGA 307
+ GVLHRDIK N+LID N G LK+ DFG + ++ T T Y PPE +
Sbjct: 160 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYH 216
Query: 308 TYYGTAVDLWSTGCILAELYAG 329
Y+G + +WS G +L ++ G
Sbjct: 217 RYHGRSAAVWSLGILLYDMVCG 238
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 94/202 (46%), Gaps = 17/202 (8%)
Query: 138 IGQGTYSNVYRARDLDQKKIVALKKVRFDNLE-----PESVRFMAREIHILRRLD--HIN 190
+G G + +VY + VA+K V D + P R + E+ +L+++
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFSG 102
Query: 191 VIKLEGLVTSRMSCSLYLVFEYME--HDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCH 248
VI+L L S L+ E E DL + G E + + Q+L + HCH
Sbjct: 103 VIRL--LDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCH 159
Query: 249 SRGVLHRDIKGSNLLID-NNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGA 307
+ GVLHRDIK N+LID N G LK+ DFG + ++ T T Y PPE +
Sbjct: 160 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYH 216
Query: 308 TYYGTAVDLWSTGCILAELYAG 329
Y+G + +WS G +L ++ G
Sbjct: 217 RYHGRSAAVWSLGILLYDMVCG 238
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 94/202 (46%), Gaps = 17/202 (8%)
Query: 138 IGQGTYSNVYRARDLDQKKIVALKKVRFDNLE-----PESVRFMAREIHILRRLD--HIN 190
+G G + +VY + VA+K V D + P R + E+ +L+++
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFSG 70
Query: 191 VIKLEGLVTSRMSCSLYLVFEYME--HDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCH 248
VI+L L S L+ E E DL + G E + + Q+L + HCH
Sbjct: 71 VIRL--LDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCH 127
Query: 249 SRGVLHRDIKGSNLLID-NNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGA 307
+ GVLHRDIK N+LID N G LK+ DFG + ++ T T Y PPE +
Sbjct: 128 NXGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYH 184
Query: 308 TYYGTAVDLWSTGCILAELYAG 329
Y+G + +WS G +L ++ G
Sbjct: 185 RYHGRSAAVWSLGILLYDMVCG 206
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 105/215 (48%), Gaps = 13/215 (6%)
Query: 135 LDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINVIKL 194
+ +IG G + V+ L++ K VA+K ++ ++ + E ++ +L H +++L
Sbjct: 32 VQEIGSGQFGLVHLGYWLNKDK-VAIKTIKEGSMSEDD---FIEEAEVMMKLSHPKLVQL 87
Query: 195 EGLVTSRMSCSLYLVFEYMEHDLAG--LASHPGLKFSEAQVKCYMQQLLC-GLDHCHSRG 251
G+ + + LVFE+MEH L + GL +E + + +C G+ +
Sbjct: 88 YGVCLEQ--APICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLD--VCEGMAYLEEAC 143
Query: 252 VLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGATYYG 311
V+HRD+ N L+ N ++K++DFG+ F DQ T + + PE + + Y
Sbjct: 144 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPE-VFSFSRYS 202
Query: 312 TAVDLWSTGCILAELYA-GKPIMPGRTEVEQLHKI 345
+ D+WS G ++ E+++ GK R+ E + I
Sbjct: 203 SKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI 237
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 92/343 (26%), Positives = 136/343 (39%), Gaps = 65/343 (18%)
Query: 121 IQGWVPRRADSFEKLDKIGQGTYSNVYRARDLDQ-KKIVALKKVRFDNLEPESVRFMARE 179
I W+ R +E + +G+GT+ V D + K VALK +R E+ R E
Sbjct: 45 IGDWLQER---YEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARL---E 98
Query: 180 IHILRRLDHINVIKLEGLVTSRMSCSLYL-VFEYMEH-----DLAGLASHPGLKFSEAQ- 232
I++L+++ E ++ C L F + H +L G + LK + Q
Sbjct: 99 INVLKKIK-------EKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQP 151
Query: 233 -----VKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDN-------------------NG 268
V+ QL L H + H D+K N+L N N
Sbjct: 152 YPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNT 211
Query: 269 ILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYA 328
+++ADFG A+F ++ T+ V T YRPPE++L + D+WS GCIL E Y
Sbjct: 212 SIRVADFGSATF----DHEHHTTIVATRHYRPPEVILELGW-AQPCDVWSIGCILFEYYR 266
Query: 329 GKPIMPGRTEVEQLHKIFKLCG-SPSEDYWRKSKLPH----ATIFKPQQPYKRCVAETFK 383
G + E L + K+ G PS R K + ++ R V E K
Sbjct: 267 GFTLFQTHENREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCK 326
Query: 384 DFPAPALA----------LMETLLSIDPADRGSAASALRSEFF 416
+ L LM +L DPA R + A AL FF
Sbjct: 327 PLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFF 369
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 92/343 (26%), Positives = 136/343 (39%), Gaps = 65/343 (18%)
Query: 121 IQGWVPRRADSFEKLDKIGQGTYSNVYRARDLDQ-KKIVALKKVRFDNLEPESVRFMARE 179
I W+ R +E + +G+GT+ V D + K VALK +R E+ R E
Sbjct: 22 IGDWLQER---YEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARL---E 75
Query: 180 IHILRRLDHINVIKLEGLVTSRMSCSLYL-VFEYMEH-----DLAGLASHPGLKFSEAQ- 232
I++L+++ E ++ C L F + H +L G + LK + Q
Sbjct: 76 INVLKKIK-------EKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQP 128
Query: 233 -----VKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDN-------------------NG 268
V+ QL L H + H D+K N+L N N
Sbjct: 129 YPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNT 188
Query: 269 ILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYA 328
+++ADFG A+F ++ T+ V T YRPPE++L + D+WS GCIL E Y
Sbjct: 189 SIRVADFGSATF----DHEHHTTIVATRHYRPPEVILELGW-AQPCDVWSIGCILFEYYR 243
Query: 329 GKPIMPGRTEVEQLHKIFKLCG-SPSEDYWRKSKLPH----ATIFKPQQPYKRCVAETFK 383
G + E L + K+ G PS R K + ++ R V E K
Sbjct: 244 GFTLFQTHENREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCK 303
Query: 384 DFPAPALA----------LMETLLSIDPADRGSAASALRSEFF 416
+ L LM +L DPA R + A AL FF
Sbjct: 304 PLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFF 346
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 104/229 (45%), Gaps = 15/229 (6%)
Query: 124 WVPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHIL 183
W R D K K+G G Y VY VA+K ++ D +E E +E ++
Sbjct: 9 WEMERTDITMK-HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLKEAAVM 64
Query: 184 RRLDHINVIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYM-QQLL 241
+ + H N+++L G+ T Y++ E+M + +L + A V YM Q+
Sbjct: 65 KEIKHPNLVQLLGVCTRE--PPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS 122
Query: 242 CGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQ-NQPLTSRVVTLWYRP 300
+++ + +HRD+ N L+ N ++K+ADFGL+ D P ++ W P
Sbjct: 123 SAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAP 182
Query: 301 PELLLGATYYGTAVDLWSTGCILAEL--YAGKPIMPGRTEVEQLHKIFK 347
L + D+W+ G +L E+ Y P PG ++ Q++++ +
Sbjct: 183 ESLAYNK--FSIKSDVWAFGVLLWEIATYGMSPY-PG-IDLSQVYELLE 227
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 104/229 (45%), Gaps = 15/229 (6%)
Query: 124 WVPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHIL 183
W R D K K+G G Y VY VA+K ++ D +E E +E ++
Sbjct: 10 WEMERTDITMK-HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLKEAAVM 65
Query: 184 RRLDHINVIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYM-QQLL 241
+ + H N+++L G+ T Y++ E+M + +L + A V YM Q+
Sbjct: 66 KEIKHPNLVQLLGVCTRE--PPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS 123
Query: 242 CGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQ-NQPLTSRVVTLWYRP 300
+++ + +HRD+ N L+ N ++K+ADFGL+ D P ++ W P
Sbjct: 124 SAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAP 183
Query: 301 PELLLGATYYGTAVDLWSTGCILAEL--YAGKPIMPGRTEVEQLHKIFK 347
L + D+W+ G +L E+ Y P PG ++ Q++++ +
Sbjct: 184 ESLAYNK--FSIKSDVWAFGVLLWEIATYGMSPY-PG-IDLSQVYELLE 228
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 108/230 (46%), Gaps = 21/230 (9%)
Query: 132 FEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHIN- 190
+ L +IG G S V++ + ++K+I A+K V + + +++ EI L +L +
Sbjct: 14 YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 72
Query: 191 -VIKLEGL-VTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCH 248
+I+L +T + +Y+V E DL + K Y + +L + H
Sbjct: 73 KIIRLYDYEITDQY---IYMVMECGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIH 128
Query: 249 SRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLT-SRVVTLWYRPPELLLGA 307
G++H D+K +N LI +G+LK+ DFG+A+ PD + S+V T+ Y PPE +
Sbjct: 129 QHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDM 187
Query: 308 T----------YYGTAVDLWSTGCILAELYAGK-PIMPGRTEVEQLHKIF 346
+ D+WS GCIL + GK P ++ +LH I
Sbjct: 188 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAII 237
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 94/202 (46%), Gaps = 17/202 (8%)
Query: 138 IGQGTYSNVYRARDLDQKKIVALKKVRFDNLE-----PESVRFMAREIHILRRLD--HIN 190
+G G + +VY + VA+K V D + P R + E+ +L+++
Sbjct: 15 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFSG 73
Query: 191 VIKLEGLVTSRMSCSLYLVFEYME--HDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCH 248
VI+L L S L+ E E DL + G E + + Q+L + HCH
Sbjct: 74 VIRL--LDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCH 130
Query: 249 SRGVLHRDIKGSNLLID-NNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGA 307
+ GVLHRDIK N+LID N G LK+ DFG + ++ T T Y PPE +
Sbjct: 131 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYH 187
Query: 308 TYYGTAVDLWSTGCILAELYAG 329
Y+G + +WS G +L ++ G
Sbjct: 188 RYHGRSAAVWSLGILLYDMVCG 209
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 108/230 (46%), Gaps = 21/230 (9%)
Query: 132 FEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHIN- 190
+ L +IG G S V++ + ++K+I A+K V + + +++ EI L +L +
Sbjct: 30 YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 88
Query: 191 -VIKLEGL-VTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCH 248
+I+L +T + +Y+V E DL + K Y + +L + H
Sbjct: 89 KIIRLYDYEITDQY---IYMVMECGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIH 144
Query: 249 SRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLT-SRVVTLWYRPPELLLGA 307
G++H D+K +N LI +G+LK+ DFG+A+ PD + S+V T+ Y PPE +
Sbjct: 145 QHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDM 203
Query: 308 T----------YYGTAVDLWSTGCILAELYAGK-PIMPGRTEVEQLHKIF 346
+ D+WS GCIL + GK P ++ +LH I
Sbjct: 204 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAII 253
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 92/343 (26%), Positives = 136/343 (39%), Gaps = 65/343 (18%)
Query: 121 IQGWVPRRADSFEKLDKIGQGTYSNVYRARDLDQ-KKIVALKKVRFDNLEPESVRFMARE 179
I W+ R +E + +G+GT+ V D + K VALK +R E+ R E
Sbjct: 13 IGDWLQER---YEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARL---E 66
Query: 180 IHILRRLDHINVIKLEGLVTSRMSCSLYL-VFEYMEH-----DLAGLASHPGLKFSEAQ- 232
I++L+++ E ++ C L F + H +L G + LK + Q
Sbjct: 67 INVLKKIK-------EKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQP 119
Query: 233 -----VKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDN-------------------NG 268
V+ QL L H + H D+K N+L N N
Sbjct: 120 YPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNT 179
Query: 269 ILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYA 328
+++ADFG A+F ++ T+ V T YRPPE++L + D+WS GCIL E Y
Sbjct: 180 SIRVADFGSATF----DHEHHTTIVATRHYRPPEVILELGW-AQPCDVWSIGCILFEYYR 234
Query: 329 GKPIMPGRTEVEQLHKIFKLCG-SPSEDYWRKSKLPH----ATIFKPQQPYKRCVAETFK 383
G + E L + K+ G PS R K + ++ R V E K
Sbjct: 235 GFTLFQTHENREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCK 294
Query: 384 DFPAPALA----------LMETLLSIDPADRGSAASALRSEFF 416
+ L LM +L DPA R + A AL FF
Sbjct: 295 PLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFF 337
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 94/203 (46%), Gaps = 7/203 (3%)
Query: 130 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNL-EPESVRFMAREIHILRRLDH 188
+ F+ L +G+GT+ V R+ + A+K +R + + + V E +L+ H
Sbjct: 8 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 67
Query: 189 INVIKLE-GLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHC 247
+ L+ T C V EY F+E + + Y +++ L++
Sbjct: 68 PFLTALKYAFQTHDRLC---FVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYL 124
Query: 248 HSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGA 307
HSR V++RDIK NL++D +G +KI DFGL D + + T Y PE+L
Sbjct: 125 HSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD-GATMKTFCGTPEYLAPEVLEDN 183
Query: 308 TYYGTAVDLWSTGCILAELYAGK 330
YG AVD W G ++ E+ G+
Sbjct: 184 D-YGRAVDWWGLGVVMYEMMCGR 205
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 100/213 (46%), Gaps = 8/213 (3%)
Query: 129 ADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPES--VRFMAREIHILRRL 186
+D +E + +G G S V+ ARDL + VA+K +R D S +RF RE L
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFR-REAQNAAAL 69
Query: 187 DHINVIKL--EGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGL 244
+H ++ + G + Y+V EY++ H + + + L
Sbjct: 70 NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQAL 129
Query: 245 DHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLA-SFYDPDQNQPLTSRVV-TLWYRPPE 302
+ H G++HRD+K +N++I +K+ DFG+A + D + T+ V+ T Y PE
Sbjct: 130 NFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE 189
Query: 303 LLLGATYYGTAVDLWSTGCILAELYAGKPIMPG 335
G + + D++S GC+L E+ G+P G
Sbjct: 190 QARGDSVDARS-DVYSLGCVLYEVLTGEPPFTG 221
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 99/222 (44%), Gaps = 8/222 (3%)
Query: 130 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKV-RFDNLEPESVRFMAREIHILRRLDH 188
+ FE L IG+G + V + + K+ A+K + +++ L+ E +L D
Sbjct: 74 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDS 133
Query: 189 INVIKLEGLVTSRMSCSLYLVFEY-MEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHC 247
+ L + +LYLV +Y + DL L S + E + Y+ +++ +D
Sbjct: 134 KWITTLH--YAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSV 191
Query: 248 HSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLL-- 305
H +HRDIK N+L+D NG +++ADFG D + V T Y PE+L
Sbjct: 192 HQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAM 251
Query: 306 --GATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKI 345
G YG D WS G + E+ G+ + VE KI
Sbjct: 252 EGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKI 293
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 102/217 (47%), Gaps = 8/217 (3%)
Query: 129 ADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPES--VRFMAREIHILRRL 186
+D +E + +G G S V+ ARDL + VA+K +R D S +RF RE L
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFR-REAQNAAAL 69
Query: 187 DHINVIKL--EGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGL 244
+H ++ + G + Y+V EY++ H + + + L
Sbjct: 70 NHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQAL 129
Query: 245 DHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLA-SFYDPDQNQPLTSRVV-TLWYRPPE 302
+ H G++HRD+K +N++I +K+ DFG+A + D + T+ V+ T Y PE
Sbjct: 130 NFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE 189
Query: 303 LLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEV 339
G + + D++S GC+L E+ G+P G + V
Sbjct: 190 QARGDSVDARS-DVYSLGCVLYEVLTGEPPFTGDSPV 225
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 102/217 (47%), Gaps = 8/217 (3%)
Query: 129 ADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPES--VRFMAREIHILRRL 186
+D +E + +G G S V+ ARDL + VA+K +R D S +RF RE L
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFR-REAQNAAAL 69
Query: 187 DHINVIKL--EGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGL 244
+H ++ + G + Y+V EY++ H + + + L
Sbjct: 70 NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQAL 129
Query: 245 DHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLA-SFYDPDQNQPLTSRVV-TLWYRPPE 302
+ H G++HRD+K +N++I +K+ DFG+A + D + T+ V+ T Y PE
Sbjct: 130 NFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE 189
Query: 303 LLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEV 339
G + + D++S GC+L E+ G+P G + V
Sbjct: 190 QARGDSVDARS-DVYSLGCVLYEVLTGEPPFTGDSPV 225
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 108/230 (46%), Gaps = 21/230 (9%)
Query: 132 FEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHIN- 190
+ L +IG G S V++ + ++K+I A+K V + + +++ EI L +L +
Sbjct: 10 YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 68
Query: 191 -VIKLEGL-VTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCH 248
+I+L +T + +Y+V E DL + K Y + +L + H
Sbjct: 69 KIIRLYDYEITDQY---IYMVMECGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIH 124
Query: 249 SRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLT-SRVVTLWYRPPELLLGA 307
G++H D+K +N LI +G+LK+ DFG+A+ PD + S+V T+ Y PPE +
Sbjct: 125 QHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDM 183
Query: 308 T----------YYGTAVDLWSTGCILAELYAGK-PIMPGRTEVEQLHKIF 346
+ D+WS GCIL + GK P ++ +LH I
Sbjct: 184 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAII 233
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 94/202 (46%), Gaps = 17/202 (8%)
Query: 138 IGQGTYSNVYRARDLDQKKIVALKKVRFDNLE-----PESVRFMAREIHILRRLD--HIN 190
+G G + +VY + VA+K V D + P R + E+ +L+++
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFSG 70
Query: 191 VIKLEGLVTSRMSCSLYLVFEYME--HDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCH 248
VI+L L S L+ E E DL + G E + + Q+L + HCH
Sbjct: 71 VIRL--LDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCH 127
Query: 249 SRGVLHRDIKGSNLLID-NNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGA 307
+ GVLHRDIK N+LID N G LK+ DFG + ++ T T Y PPE +
Sbjct: 128 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYH 184
Query: 308 TYYGTAVDLWSTGCILAELYAG 329
Y+G + +WS G +L ++ G
Sbjct: 185 RYHGRSAAVWSLGILLYDMVCG 206
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 108/230 (46%), Gaps = 21/230 (9%)
Query: 132 FEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHIN- 190
+ L +IG G S V++ + ++K+I A+K V + + +++ EI L +L +
Sbjct: 30 YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 88
Query: 191 -VIKLEGL-VTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCH 248
+I+L +T + +Y+V E DL + K Y + +L + H
Sbjct: 89 KIIRLYDYEITDQY---IYMVMECGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIH 144
Query: 249 SRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLT-SRVVTLWYRPPELLLGA 307
G++H D+K +N LI +G+LK+ DFG+A+ PD + S+V T+ Y PPE +
Sbjct: 145 QHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDXXXVVKDSQVGTVNYMPPEAIKDM 203
Query: 308 T----------YYGTAVDLWSTGCILAELYAGK-PIMPGRTEVEQLHKIF 346
+ D+WS GCIL + GK P ++ +LH I
Sbjct: 204 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAII 253
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 94/203 (46%), Gaps = 7/203 (3%)
Query: 130 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNL-EPESVRFMAREIHILRRLDH 188
+ F+ L +G+GT+ V R+ + A+K +R + + + V E +L+ H
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 189 INVIKLE-GLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHC 247
+ L+ T C V EY F+E + + Y +++ L++
Sbjct: 65 PFLTALKYAFQTHDRLC---FVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYL 121
Query: 248 HSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGA 307
HSR V++RDIK NL++D +G +KI DFGL D + + T Y PE+L
Sbjct: 122 HSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD-GATMKTFCGTPEYLAPEVLEDN 180
Query: 308 TYYGTAVDLWSTGCILAELYAGK 330
YG AVD W G ++ E+ G+
Sbjct: 181 D-YGRAVDWWGLGVVMYEMMCGR 202
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 94/202 (46%), Gaps = 17/202 (8%)
Query: 138 IGQGTYSNVYRARDLDQKKIVALKKVRFDNLE-----PESVRFMAREIHILRRLD--HIN 190
+G G + +VY + VA+K V D + P R + E+ +L+++
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFSG 70
Query: 191 VIKLEGLVTSRMSCSLYLVFEYME--HDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCH 248
VI+L L S L+ E E DL + G E + + Q+L + HCH
Sbjct: 71 VIRL--LDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCH 127
Query: 249 SRGVLHRDIKGSNLLID-NNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGA 307
+ GVLHRDIK N+LID N G LK+ DFG + ++ T T Y PPE +
Sbjct: 128 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYH 184
Query: 308 TYYGTAVDLWSTGCILAELYAG 329
Y+G + +WS G +L ++ G
Sbjct: 185 RYHGRSAAVWSLGILLYDMVCG 206
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 103/228 (45%), Gaps = 13/228 (5%)
Query: 124 WVPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHIL 183
W R D K K+G G Y VY VA+K ++ D +E E +E ++
Sbjct: 9 WEMERTDITMK-HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLKEAAVM 64
Query: 184 RRLDHINVIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYM-QQLL 241
+ + H N+++L G+ T Y++ E+M + +L + A V YM Q+
Sbjct: 65 KEIKHPNLVQLLGVCTRE--PPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS 122
Query: 242 CGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPP 301
+++ + +HRD+ N L+ N ++K+ADFGL+ D + + P
Sbjct: 123 SAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAP 182
Query: 302 ELLLGATYYGTAVDLWSTGCILAEL--YAGKPIMPGRTEVEQLHKIFK 347
E L + D+W+ G +L E+ Y P PG ++ Q++++ +
Sbjct: 183 E-SLAYNKFSIKSDVWAFGVLLWEIATYGMSP-YPG-IDLSQVYELLE 227
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 94/203 (46%), Gaps = 7/203 (3%)
Query: 130 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNL-EPESVRFMAREIHILRRLDH 188
+ F+ L +G+GT+ V R+ + A+K +R + + + V E +L+ H
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 189 INVIKLE-GLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHC 247
+ L+ T C V EY F+E + + Y +++ L++
Sbjct: 65 PFLTALKYAFQTHDRLC---FVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYL 121
Query: 248 HSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGA 307
HSR V++RDIK NL++D +G +KI DFGL D + + T Y PE+L
Sbjct: 122 HSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD-GATMKTFCGTPEYLAPEVLEDN 180
Query: 308 TYYGTAVDLWSTGCILAELYAGK 330
YG AVD W G ++ E+ G+
Sbjct: 181 D-YGRAVDWWGLGVVMYEMMCGR 202
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 105/208 (50%), Gaps = 15/208 (7%)
Query: 134 KLDK-IGQGTYSNVYRARDLDQKK---IVALKKVRFDNLEPESVRFMAREIHILRRLDHI 189
K++K IG G + V R K VA+K ++ + + F++ E I+ + DH
Sbjct: 32 KIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLS-EASIMGQFDHP 90
Query: 190 NVIKLEGLVTSRMSCS-LYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHC 247
N+I LEG+VT C + ++ EYME+ L +F+ Q+ ++ + G+ +
Sbjct: 91 NIIHLEGVVTK---CKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYL 147
Query: 248 HSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSR--VVTLWYRPPELLL 305
+HRD+ N+L+++N + K++DFG++ + D T+R + + + PE +
Sbjct: 148 SDMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPE-AI 206
Query: 306 GATYYGTAVDLWSTGCILAEL--YAGKP 331
+ +A D+WS G ++ E+ Y +P
Sbjct: 207 AYRKFTSASDVWSYGIVMWEVMSYGERP 234
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 93/209 (44%), Gaps = 9/209 (4%)
Query: 120 AIQGWVPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMARE 179
++ W R D K K+G G Y VY VA+K ++ D +E E +E
Sbjct: 2 SLDKWEMERTDITMK-HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLKE 57
Query: 180 IHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYM- 237
+++ + H N+++L G+ T Y++ E+M + +L + A V YM
Sbjct: 58 AAVMKEIKHPNLVQLLGVCTRE--PPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMA 115
Query: 238 QQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLW 297
Q+ +++ + +HRD+ N L+ N ++K+ADFGL+ D +
Sbjct: 116 TQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIK 175
Query: 298 YRPPELLLGATYYGTAVDLWSTGCILAEL 326
+ PE L + D+W+ G +L E+
Sbjct: 176 WTAPE-SLAYNKFSIKSDVWAFGVLLWEI 203
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 118/261 (45%), Gaps = 39/261 (14%)
Query: 125 VPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILR 184
+PR +S + + ++G G + V+ + K VA+K ++ + SV+ E ++++
Sbjct: 10 IPR--ESIKLVKRLGAGQFGEVWMGYYNNSTK-VAVKTLKPGTM---SVQAFLEEANLMK 63
Query: 185 RLDHINVIKLEGLVTSRMSCSLYLVFEYMEHD--LAGLASHPGLKFSEAQVKCYMQQLLC 242
L H +++L +VT +Y++ EYM L L S G K ++ + Q+
Sbjct: 64 TLQHDKLVRLYAVVTREEP--IYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAE 121
Query: 243 GLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFY-DPDQNQPLTSRVVTLWYRPP 301
G+ + + +HRD++ +N+L+ + + KIADFGLA D + ++ W P
Sbjct: 122 GMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPE 181
Query: 302 ELLLGATYYGTAVDLWSTGCILAELYA-GKPIMPGRTEV-------------------EQ 341
+ G + D+WS G +L E+ GK PGRT ++
Sbjct: 182 AINFGC--FTIKSDVWSFGILLYEIVTYGKIPYPGRTNADVMTALSQGYRMPRVENCPDE 239
Query: 342 LHKIFKLCGS------PSEDY 356
L+ I K+C P+ DY
Sbjct: 240 LYDIMKMCWKEKAEERPTFDY 260
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 106/232 (45%), Gaps = 17/232 (7%)
Query: 123 GWVPR---------RADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPES- 172
G VPR +D +E + +G G S V+ ARDL + VA+K +R D S
Sbjct: 13 GLVPRGSHMTTPSHLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSF 72
Query: 173 -VRFMAREIHILRRLDHINVIKL--EGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFS 229
+RF RE L+H ++ + G + Y+V EY++ H +
Sbjct: 73 YLRFR-REAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMT 131
Query: 230 EAQVKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLA-SFYDPDQNQP 288
+ + L+ H G++HRD+K +N++I +K+ DFG+A + D +
Sbjct: 132 PKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVT 191
Query: 289 LTSRVV-TLWYRPPELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEV 339
T+ V+ T Y PE G + + D++S GC+L E+ G+P G + V
Sbjct: 192 QTAAVIGTAQYLSPEQARGDSVDARS-DVYSLGCVLYEVLTGEPPFTGDSPV 242
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 97/200 (48%), Gaps = 16/200 (8%)
Query: 136 DKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINVIKLE 195
++IG+G + V+ R +VA+K R + L P+ +E IL++ H N+++L
Sbjct: 120 EQIGRGNFGEVFSGRLRADNTLVAVKSCR-ETLPPDLKAKFLQEARILKQYSHPNIVRLI 178
Query: 196 GLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQL---LCGLDHCHSRG 251
G+ T + +Y+V E ++ D G + +VK +Q + G+++ S+
Sbjct: 179 GVCTQKQP--IYIVMELVQGGDFLTFLRTEGARL---RVKTLLQMVGDAAAGMEYLESKC 233
Query: 252 VLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTS---RVVTLWYRPPELLLGAT 308
+HRD+ N L+ +LKI+DFG+ S + D + +V W P L G
Sbjct: 234 CIHRDLAARNCLVTEKNVLKISDFGM-SREEADGVXAASGGLRQVPVKWTAPEALNYGR- 291
Query: 309 YYGTAVDLWSTGCILAELYA 328
Y + D+WS G +L E ++
Sbjct: 292 -YSSESDVWSFGILLWETFS 310
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 103/215 (47%), Gaps = 13/215 (6%)
Query: 135 LDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINVIKL 194
+ +IG G + V+ L++ K VA+K +R + E E ++ +L H +++L
Sbjct: 13 VQEIGSGQFGLVHLGYWLNKDK-VAIKTIREGAMSEED---FIEEAEVMMKLSHPKLVQL 68
Query: 195 EGLVTSRMSCSLYLVFEYMEHDLAG--LASHPGLKFSEAQVKCYMQQLLC-GLDHCHSRG 251
G+ + + LV E+MEH L + GL +E + + +C G+ +
Sbjct: 69 YGVCLEQ--APICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLD--VCEGMAYLEEAC 124
Query: 252 VLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGATYYG 311
V+HRD+ N L+ N ++K++DFG+ F DQ T + + PE + + Y
Sbjct: 125 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPE-VFSFSRYS 183
Query: 312 TAVDLWSTGCILAELYA-GKPIMPGRTEVEQLHKI 345
+ D+WS G ++ E+++ GK R+ E + I
Sbjct: 184 SKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI 218
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 103/228 (45%), Gaps = 13/228 (5%)
Query: 124 WVPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHIL 183
W R D K K+G G Y VY VA+K ++ D +E E +E ++
Sbjct: 8 WEMERTDITMK-HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLKEAAVM 63
Query: 184 RRLDHINVIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYM-QQLL 241
+ + H N+++L G+ T Y++ E+M + +L + A V YM Q+
Sbjct: 64 KEIKHPNLVQLLGVCTRE--PPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQIS 121
Query: 242 CGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPP 301
+++ + +HRD+ N L+ N ++K+ADFGL+ D + + P
Sbjct: 122 SAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAP 181
Query: 302 ELLLGATYYGTAVDLWSTGCILAEL--YAGKPIMPGRTEVEQLHKIFK 347
E L + D+W+ G +L E+ Y P PG ++ Q++++ +
Sbjct: 182 E-SLAYNKFSIKSDVWAFGVLLWEIATYGMSP-YPG-IDLSQVYELLE 226
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 101/207 (48%), Gaps = 22/207 (10%)
Query: 136 DKIGQGTYSNVYRA----RDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINV 191
+K+G+G + VY+ + KK+ A+ + + L+ + +EI ++ + H N+
Sbjct: 37 NKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQ----FDQEIKVMAKCQHENL 92
Query: 192 IKLEGLVTSRMSCSLYLVFEYMEHD-----LAGLASHPGLKFSEAQVKCYMQQ-LLCGLD 245
++L G S L LV+ YM + L+ L P L + ++C + Q G++
Sbjct: 93 VELLGF--SSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSW---HMRCKIAQGAANGIN 147
Query: 246 HCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVV-TLWYRPPELL 304
H +HRDIK +N+L+D KI+DFGLA + + SR+V T Y PE L
Sbjct: 148 FLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPEAL 207
Query: 305 LGATYYGTAVDLWSTGCILAELYAGKP 331
G + D++S G +L E+ G P
Sbjct: 208 RGEITPKS--DIYSFGVVLLEIITGLP 232
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 103/228 (45%), Gaps = 13/228 (5%)
Query: 124 WVPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHIL 183
W R D K K+G G Y VY VA+K ++ D +E E +E ++
Sbjct: 8 WEMERTDITMK-HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLKEAAVM 63
Query: 184 RRLDHINVIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYM-QQLL 241
+ + H N+++L G+ T Y++ E+M + +L + A V YM Q+
Sbjct: 64 KEIKHPNLVQLLGVCTRE--PPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQIS 121
Query: 242 CGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPP 301
+++ + +HRD+ N L+ N ++K+ADFGL+ D + + P
Sbjct: 122 SAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAP 181
Query: 302 ELLLGATYYGTAVDLWSTGCILAEL--YAGKPIMPGRTEVEQLHKIFK 347
E L + D+W+ G +L E+ Y P PG ++ Q++++ +
Sbjct: 182 E-SLAYNKFSIKSDVWAFGVLLWEIATYGMSP-YPG-IDLSQVYELLE 226
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 93/203 (45%), Gaps = 7/203 (3%)
Query: 130 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNL-EPESVRFMAREIHILRRLDH 188
+ F+ L +G+GT+ V R+ + A+K +R + + + V E +L+ H
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 189 INVIKLE-GLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHC 247
+ L+ T C V EY F+E + + Y +++ L++
Sbjct: 65 PFLTALKYAFQTHDRLC---FVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYL 121
Query: 248 HSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGA 307
HSR V++RDIK NL++D +G +KI DFGL D + T Y PE+L
Sbjct: 122 HSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD-GATMKXFCGTPEYLAPEVLEDN 180
Query: 308 TYYGTAVDLWSTGCILAELYAGK 330
YG AVD W G ++ E+ G+
Sbjct: 181 D-YGRAVDWWGLGVVMYEMMCGR 202
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 103/228 (45%), Gaps = 13/228 (5%)
Query: 124 WVPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHIL 183
W R D K K+G G Y VY VA+K ++ D +E E +E ++
Sbjct: 13 WEMERTDITMK-HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLKEAAVM 68
Query: 184 RRLDHINVIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYM-QQLL 241
+ + H N+++L G+ T Y++ E+M + +L + A V YM Q+
Sbjct: 69 KEIKHPNLVQLLGVCTRE--PPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS 126
Query: 242 CGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPP 301
+++ + +HRD+ N L+ N ++K+ADFGL+ D + + P
Sbjct: 127 SAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAP 186
Query: 302 ELLLGATYYGTAVDLWSTGCILAEL--YAGKPIMPGRTEVEQLHKIFK 347
E L + D+W+ G +L E+ Y P PG ++ Q++++ +
Sbjct: 187 E-SLAYNKFSIKSDVWAFGVLLWEIATYGMSPY-PG-IDLSQVYELLE 231
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 103/228 (45%), Gaps = 13/228 (5%)
Query: 124 WVPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHIL 183
W R D K K+G G Y VY VA+K ++ D +E E +E ++
Sbjct: 13 WEMERTDITMK-HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLKEAAVM 68
Query: 184 RRLDHINVIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYM-QQLL 241
+ + H N+++L G+ T Y++ E+M + +L + A V YM Q+
Sbjct: 69 KEIKHPNLVQLLGVCTRE--PPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQIS 126
Query: 242 CGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPP 301
+++ + +HRD+ N L+ N ++K+ADFGL+ D + + P
Sbjct: 127 SAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAP 186
Query: 302 ELLLGATYYGTAVDLWSTGCILAEL--YAGKPIMPGRTEVEQLHKIFK 347
E L + D+W+ G +L E+ Y P PG ++ Q++++ +
Sbjct: 187 E-SLAYNKFSIKSDVWAFGVLLWEIATYGMSPY-PG-IDLSQVYELLE 231
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 93/203 (45%), Gaps = 7/203 (3%)
Query: 130 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNL-EPESVRFMAREIHILRRLDH 188
+ F+ L +G+GT+ V R+ + A+K +R + + + V E +L+ H
Sbjct: 10 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 69
Query: 189 INVIKLE-GLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHC 247
+ L+ T C V EY F+E + + Y +++ L++
Sbjct: 70 PFLTALKYAFQTHDRLC---FVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYL 126
Query: 248 HSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGA 307
HSR V++RDIK NL++D +G +KI DFGL D + T Y PE+L
Sbjct: 127 HSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD-GATMKXFCGTPEYLAPEVLEDN 185
Query: 308 TYYGTAVDLWSTGCILAELYAGK 330
YG AVD W G ++ E+ G+
Sbjct: 186 D-YGRAVDWWGLGVVMYEMMCGR 207
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 131/294 (44%), Gaps = 38/294 (12%)
Query: 135 LDKIGQGTYSNVYRAR-DLDQKKIV--ALKKVRFDNL-EPESVRFMAREIHILRRLDHIN 190
L+K+G G++ V R D K V A+K ++ D L +PE++ RE++ + LDH N
Sbjct: 23 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 82
Query: 191 VIKLEGLVTS---RMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHC 247
+I+L G+V + +M L + ++ L H G F + Y Q+ G+ +
Sbjct: 83 LIRLYGVVLTPPMKMVTELAPLGSLLDR----LRKHQG-HFLLGTLSRYAVQVAEGMGYL 137
Query: 248 HSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTS--RVVTLWYRPPELLL 305
S+ +HRD+ NLL+ ++KI DFGL + + + R V + PE L
Sbjct: 138 ESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLK 197
Query: 306 GATYYGTAVDLWSTGCILAELYA-GKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSKLPH 364
T + A D W G L E++ G+ G + LHKI K +LP
Sbjct: 198 TRT-FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK----------EGERLPR 246
Query: 365 ATIFKPQQPYK---RCVAETFKDFPAPALALMETLLSIDPADRGSAASALRSEF 415
PQ Y +C A +D P +AL + LL P D +R+EF
Sbjct: 247 PEDC-PQDIYNVMVQCWAHKPEDRPT-FVALRDFLLEAQPTD-------MRAEF 291
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 103/228 (45%), Gaps = 13/228 (5%)
Query: 124 WVPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHIL 183
W R D K K+G G Y VY VA+K ++ D +E E +E ++
Sbjct: 13 WEMERTDITMK-HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLKEAAVM 68
Query: 184 RRLDHINVIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYM-QQLL 241
+ + H N+++L G+ T Y++ E+M + +L + A V YM Q+
Sbjct: 69 KEIKHPNLVQLLGVCTRE--PPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS 126
Query: 242 CGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPP 301
+++ + +HRD+ N L+ N ++K+ADFGL+ D + + P
Sbjct: 127 SAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAP 186
Query: 302 ELLLGATYYGTAVDLWSTGCILAEL--YAGKPIMPGRTEVEQLHKIFK 347
E L + D+W+ G +L E+ Y P PG ++ Q++++ +
Sbjct: 187 E-SLAYNKFSIKSDVWAFGVLLWEIATYGMSPY-PG-IDLSQVYELLE 231
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 99/202 (49%), Gaps = 18/202 (8%)
Query: 137 KIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINVIKLEG 196
+IG G++ VY+ + VA+K + P+ ++ E+ +LR+ H+N++ G
Sbjct: 43 RIGSGSFGTVYKGK---WHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 99
Query: 197 LVTSRMSCSLYLVFEYMEHDLAGLASHPGL---KFSEAQVKCYMQQLLCGLDHCHSRGVL 253
T L +V ++ E + L H + KF ++ +Q G+D+ H++ ++
Sbjct: 100 YSTK---PQLAIVTQWCEG--SSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSII 154
Query: 254 HRDIKGSNLLIDNNGILKIADFGLAS----FYDPDQNQPLTSRVVTLWYRPPEL-LLGAT 308
HRD+K +N+ + + +KI DFGLA+ + Q + L+ + LW P + +
Sbjct: 155 HRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSI--LWMAPEVIRMQDKN 212
Query: 309 YYGTAVDLWSTGCILAELYAGK 330
Y D+++ G +L EL G+
Sbjct: 213 PYSFQSDVYAFGIVLYELMTGQ 234
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 95/202 (47%), Gaps = 20/202 (9%)
Query: 136 DKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINVIKLE 195
++IG+G + V+ R +VA+K R + L P+ +E IL++ H N+++L
Sbjct: 120 EQIGRGNFGEVFSGRLRADNTLVAVKSCR-ETLPPDLKAKFLQEARILKQYSHPNIVRLI 178
Query: 196 GLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQL---LCGLDHCHSRG 251
G+ T + +Y+V E ++ D G + +VK +Q + G+++ S+
Sbjct: 179 GVCTQKQP--IYIVMELVQGGDFLTFLRTEGARL---RVKTLLQMVGDAAAGMEYLESKC 233
Query: 252 VLHRDIKGSNLLIDNNGILKIADFGLA-----SFYDPDQNQPLTSRVVTLWYRPPELLLG 306
+HRD+ N L+ +LKI+DFG++ Y +V W P L G
Sbjct: 234 CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGG---LRQVPVKWTAPEALNYG 290
Query: 307 ATYYGTAVDLWSTGCILAELYA 328
Y + D+WS G +L E ++
Sbjct: 291 R--YSSESDVWSFGILLWETFS 310
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 93/203 (45%), Gaps = 7/203 (3%)
Query: 130 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNL-EPESVRFMAREIHILRRLDH 188
+ F+ L +G+GT+ V R+ + A+K +R + + + V E +L+ H
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 189 INVIKLE-GLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHC 247
+ L+ T C V EY F+E + + Y +++ L++
Sbjct: 65 PFLTALKYAFQTHDRLC---FVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYL 121
Query: 248 HSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGA 307
HSR V++RDIK NL++D +G +KI DFGL D + T Y PE+L
Sbjct: 122 HSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD-GATMKXFCGTPEYLAPEVLEDN 180
Query: 308 TYYGTAVDLWSTGCILAELYAGK 330
YG AVD W G ++ E+ G+
Sbjct: 181 D-YGRAVDWWGLGVVMYEMMCGR 202
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 100/222 (45%), Gaps = 8/222 (3%)
Query: 130 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKV-RFDNLEPESVRFMAREIHILRRLDH 188
+ FE + IG+G + V + + ++I A+K + +++ L+ E +L D
Sbjct: 90 EDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDC 149
Query: 189 INVIKLEGLVTSRMSCSLYLVFEY-MEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHC 247
+ L + LYLV +Y + DL L S K E + Y+ +++ +D
Sbjct: 150 QWITALH--YAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSI 207
Query: 248 HSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLL-- 305
H +HRDIK N+L+D NG +++ADFG + D + V T Y PE+L
Sbjct: 208 HQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAM 267
Query: 306 --GATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKI 345
G YG D WS G + E+ G+ + VE KI
Sbjct: 268 EDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKI 309
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 99/202 (49%), Gaps = 18/202 (8%)
Query: 137 KIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINVIKLEG 196
+IG G++ VY+ + VA+K + P+ ++ E+ +LR+ H+N++ G
Sbjct: 42 RIGSGSFGTVYKGK---WHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 98
Query: 197 LVTSRMSCSLYLVFEYMEHDLAGLASHPGL---KFSEAQVKCYMQQLLCGLDHCHSRGVL 253
T L +V ++ E + L H + KF ++ +Q G+D+ H++ ++
Sbjct: 99 YSTK---PQLAIVTQWCEG--SSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSII 153
Query: 254 HRDIKGSNLLIDNNGILKIADFGLAS----FYDPDQNQPLTSRVVTLWYRPPEL-LLGAT 308
HRD+K +N+ + + +KI DFGLA+ + Q + L+ + LW P + +
Sbjct: 154 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSI--LWMAPEVIRMQDKN 211
Query: 309 YYGTAVDLWSTGCILAELYAGK 330
Y D+++ G +L EL G+
Sbjct: 212 PYSFQSDVYAFGIVLYELMTGQ 233
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 99/202 (49%), Gaps = 18/202 (8%)
Query: 137 KIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINVIKLEG 196
+IG G++ VY+ + VA+K + P+ ++ E+ +LR+ H+N++ G
Sbjct: 43 RIGSGSFGTVYKGK---WHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 99
Query: 197 LVTSRMSCSLYLVFEYMEHDLAGLASHPGL---KFSEAQVKCYMQQLLCGLDHCHSRGVL 253
T L +V ++ E + L H + KF ++ +Q G+D+ H++ ++
Sbjct: 100 YSTK---PQLAIVTQWCEG--SSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSII 154
Query: 254 HRDIKGSNLLIDNNGILKIADFGLAS----FYDPDQNQPLTSRVVTLWYRPPEL-LLGAT 308
HRD+K +N+ + + +KI DFGLA+ + Q + L+ + LW P + +
Sbjct: 155 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSI--LWMAPEVIRMQDKN 212
Query: 309 YYGTAVDLWSTGCILAELYAGK 330
Y D+++ G +L EL G+
Sbjct: 213 PYSFQSDVYAFGIVLYELMTGQ 234
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 103/228 (45%), Gaps = 13/228 (5%)
Query: 124 WVPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHIL 183
W R D K K+G G Y VY VA+K ++ D +E E +E ++
Sbjct: 13 WEMERTDITMK-HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLKEAAVM 68
Query: 184 RRLDHINVIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYM-QQLL 241
+ + H N+++L G+ T Y++ E+M + +L + A V YM Q+
Sbjct: 69 KEIKHPNLVQLLGVCTRE--PPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS 126
Query: 242 CGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPP 301
+++ + +HRD+ N L+ N ++K+ADFGL+ D + + P
Sbjct: 127 SAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAP 186
Query: 302 ELLLGATYYGTAVDLWSTGCILAEL--YAGKPIMPGRTEVEQLHKIFK 347
E L + D+W+ G +L E+ Y P PG ++ Q++++ +
Sbjct: 187 E-SLAYNKFSIKSDVWAFGVLLWEIATYGMSPY-PG-IDLSQVYELLE 231
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 105/208 (50%), Gaps = 15/208 (7%)
Query: 134 KLDK-IGQGTYSNVYRARDLDQKK---IVALKKVRFDNLEPESVRFMAREIHILRRLDHI 189
K++K IG G + V R K VA+K ++ + + F++ E I+ + DH
Sbjct: 17 KIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLS-EASIMGQFDHP 75
Query: 190 NVIKLEGLVTSRMSCS-LYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHC 247
N+I LEG+VT C + ++ EYME+ L +F+ Q+ ++ + G+ +
Sbjct: 76 NIIHLEGVVTK---CKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYL 132
Query: 248 HSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSR--VVTLWYRPPELLL 305
+HRD+ N+L+++N + K++DFG++ + D T+R + + + PE +
Sbjct: 133 SDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPE-AI 191
Query: 306 GATYYGTAVDLWSTGCILAEL--YAGKP 331
+ +A D+WS G ++ E+ Y +P
Sbjct: 192 AYRKFTSASDVWSYGIVMWEVMSYGERP 219
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 103/228 (45%), Gaps = 13/228 (5%)
Query: 124 WVPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHIL 183
W R D K K+G G Y VY VA+K ++ D +E E +E ++
Sbjct: 254 WEMERTDITMK-HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLKEAAVM 309
Query: 184 RRLDHINVIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYM-QQLL 241
+ + H N+++L G+ T Y++ E+M + +L + A V YM Q+
Sbjct: 310 KEIKHPNLVQLLGVCTRE--PPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS 367
Query: 242 CGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPP 301
+++ + +HR++ N L+ N ++K+ADFGL+ D + + P
Sbjct: 368 SAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAP 427
Query: 302 ELLLGATYYGTAVDLWSTGCILAEL--YAGKPIMPGRTEVEQLHKIFK 347
E L + D+W+ G +L E+ Y P PG ++ Q++++ +
Sbjct: 428 E-SLAYNKFSIKSDVWAFGVLLWEIATYGMSP-YPG-IDLSQVYELLE 472
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 103/227 (45%), Gaps = 24/227 (10%)
Query: 132 FEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINV 191
F L +G+G++ V + ++ A+K ++ D + ++ + + V
Sbjct: 343 FNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKD--------VVIQDDDVECTMVEKRV 394
Query: 192 IKLEG---LVTSRMSC-----SLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLC 242
+ L G +T SC LY V EY+ DL G +F E Y ++
Sbjct: 395 LALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVG-RFKEPHAVFYAAEIAI 453
Query: 243 GLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLA--SFYDPDQNQPLTSRVVTLWYRP 300
GL S+G+++RD+K N+++D+ G +KIADFG+ + +D + T Y
Sbjct: 454 GLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCG---TPDYIA 510
Query: 301 PELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFK 347
PE ++ YG +VD W+ G +L E+ AG+ G E E I +
Sbjct: 511 PE-IIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIME 556
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 93/203 (45%), Gaps = 7/203 (3%)
Query: 130 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNL-EPESVRFMAREIHILRRLDH 188
+ F+ L +G+GT+ V R+ + A+K +R + + + V E +L+ H
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 189 INVIKLE-GLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHC 247
+ L+ T C V EY F+E + + Y +++ L++
Sbjct: 65 PFLTALKYAFQTHDRLC---FVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYL 121
Query: 248 HSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGA 307
HSR V++RDIK NL++D +G +KI DFGL D + T Y PE+L
Sbjct: 122 HSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD-GATMKXFCGTPEYLAPEVLEDN 180
Query: 308 TYYGTAVDLWSTGCILAELYAGK 330
YG AVD W G ++ E+ G+
Sbjct: 181 D-YGRAVDWWGLGVVMYEMMCGR 202
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 99/202 (49%), Gaps = 18/202 (8%)
Query: 137 KIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINVIKLEG 196
+IG G++ VY+ + VA+K + P+ ++ E+ +LR+ H+N++ G
Sbjct: 35 RIGSGSFGTVYKGK---WHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 91
Query: 197 LVTSRMSCSLYLVFEYMEHDLAGLASHPGL---KFSEAQVKCYMQQLLCGLDHCHSRGVL 253
T L +V ++ E + L H + KF ++ +Q G+D+ H++ ++
Sbjct: 92 YSTK---PQLAIVTQWCEG--SSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSII 146
Query: 254 HRDIKGSNLLIDNNGILKIADFGLAS----FYDPDQNQPLTSRVVTLWYRPPEL-LLGAT 308
HRD+K +N+ + + +KI DFGLA+ + Q + L+ + LW P + +
Sbjct: 147 HRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSI--LWMAPEVIRMQDKN 204
Query: 309 YYGTAVDLWSTGCILAELYAGK 330
Y D+++ G +L EL G+
Sbjct: 205 PYSFQSDVYAFGIVLYELMTGQ 226
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 103/228 (45%), Gaps = 13/228 (5%)
Query: 124 WVPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHIL 183
W R D K K+G G Y VY VA+K ++ D +E E +E ++
Sbjct: 10 WEMERTDITMK-HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLKEAAVM 65
Query: 184 RRLDHINVIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYM-QQLL 241
+ + H N+++L G+ T Y++ E+M + +L + A V YM Q+
Sbjct: 66 KEIKHPNLVQLLGVCTRE--PPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS 123
Query: 242 CGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPP 301
+++ + +HRD+ N L+ N ++K+ADFGL+ D + + P
Sbjct: 124 SAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAP 183
Query: 302 ELLLGATYYGTAVDLWSTGCILAEL--YAGKPIMPGRTEVEQLHKIFK 347
E L + D+W+ G +L E+ Y P PG ++ Q++++ +
Sbjct: 184 E-SLAYNKFSIKSDVWAFGVLLWEIATYGMSPY-PG-IDLSQVYELLE 228
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 100/202 (49%), Gaps = 18/202 (8%)
Query: 137 KIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINVIKLEG 196
+IG G++ VY+ + VA+K + P+ ++ E+ +LR+ H+N++ G
Sbjct: 15 RIGSGSFGTVYKGK---WHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 71
Query: 197 LVTSRMSCSLYLVFEYMEHDLAGLASHPGL---KFSEAQVKCYMQQLLCGLDHCHSRGVL 253
T+ L +V ++ E + L H + KF ++ +Q G+D+ H++ ++
Sbjct: 72 YSTAP---QLAIVTQWCEG--SSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSII 126
Query: 254 HRDIKGSNLLIDNNGILKIADFGLAS----FYDPDQNQPLTSRVVTLWYRPPEL-LLGAT 308
HRD+K +N+ + + +KI DFGLA+ + Q + L+ + LW P + +
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSI--LWMAPEVIRMQDKN 184
Query: 309 YYGTAVDLWSTGCILAELYAGK 330
Y D+++ G +L EL G+
Sbjct: 185 PYSFQSDVYAFGIVLYELMTGQ 206
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 103/228 (45%), Gaps = 13/228 (5%)
Query: 124 WVPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHIL 183
W R D K K+G G Y VY VA+K ++ D +E E +E ++
Sbjct: 8 WEMERTDITMK-HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLKEAAVM 63
Query: 184 RRLDHINVIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYM-QQLL 241
+ + H N+++L G+ T Y++ E+M + +L + A V YM Q+
Sbjct: 64 KEIKHPNLVQLLGVCTRE--PPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQIS 121
Query: 242 CGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPP 301
+++ + +HRD+ N L+ N ++K+ADFGL+ D + + P
Sbjct: 122 SAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAP 181
Query: 302 ELLLGATYYGTAVDLWSTGCILAEL--YAGKPIMPGRTEVEQLHKIFK 347
E L + D+W+ G +L E+ Y P PG ++ Q++++ +
Sbjct: 182 E-SLAYNKFSIKSDVWAFGVLLWEIATYGMSPY-PG-IDLSQVYELLE 226
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 100/222 (45%), Gaps = 8/222 (3%)
Query: 130 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKV-RFDNLEPESVRFMAREIHILRRLDH 188
+ FE + IG+G + V + + ++I A+K + +++ L+ E +L D
Sbjct: 74 EDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDC 133
Query: 189 INVIKLEGLVTSRMSCSLYLVFEY-MEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHC 247
+ L + LYLV +Y + DL L S K E + Y+ +++ +D
Sbjct: 134 QWITALH--YAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSI 191
Query: 248 HSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLL-- 305
H +HRDIK N+L+D NG +++ADFG + D + V T Y PE+L
Sbjct: 192 HQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAM 251
Query: 306 --GATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKI 345
G YG D WS G + E+ G+ + VE KI
Sbjct: 252 EDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKI 293
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 103/228 (45%), Gaps = 13/228 (5%)
Query: 124 WVPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHIL 183
W R D K K+G G Y VY VA+K ++ D +E E +E ++
Sbjct: 215 WEMERTDITMK-HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLKEAAVM 270
Query: 184 RRLDHINVIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYM-QQLL 241
+ + H N+++L G+ T Y++ E+M + +L + A V YM Q+
Sbjct: 271 KEIKHPNLVQLLGVCTRE--PPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQIS 328
Query: 242 CGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPP 301
+++ + +HR++ N L+ N ++K+ADFGL+ D + + P
Sbjct: 329 SAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAP 388
Query: 302 ELLLGATYYGTAVDLWSTGCILAEL--YAGKPIMPGRTEVEQLHKIFK 347
E L + D+W+ G +L E+ Y P PG ++ Q++++ +
Sbjct: 389 E-SLAYNKFSIKSDVWAFGVLLWEIATYGMSP-YPG-IDLSQVYELLE 433
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 105/208 (50%), Gaps = 15/208 (7%)
Query: 134 KLDK-IGQGTYSNVYRARDLDQKK---IVALKKVRFDNLEPESVRFMAREIHILRRLDHI 189
K++K IG G + V R K VA+K ++ + + F++ E I+ + DH
Sbjct: 11 KIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLS-EASIMGQFDHP 69
Query: 190 NVIKLEGLVTSRMSCS-LYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHC 247
N+I LEG+VT C + ++ EYME+ L +F+ Q+ ++ + G+ +
Sbjct: 70 NIIHLEGVVTK---CKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYL 126
Query: 248 HSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSR--VVTLWYRPPELLL 305
+HRD+ N+L+++N + K++DFG++ + D T+R + + + PE +
Sbjct: 127 SDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPE-AI 185
Query: 306 GATYYGTAVDLWSTGCILAEL--YAGKP 331
+ +A D+WS G ++ E+ Y +P
Sbjct: 186 AYRKFTSASDVWSYGIVMWEVMSYGERP 213
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 115/240 (47%), Gaps = 39/240 (16%)
Query: 138 IGQGTYSNVYRAR----DLDQKK---IVALKKVRFDNLEPESVRFMAREIHILRRL-DHI 189
+G+G + V A D D+ K VA+K ++ D E E + + E+ +++ + H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATE-EDLSDLVSEMEMMKMIGKHK 101
Query: 190 NVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASH------PGLKFS-------EAQ---- 232
N+I L G T LY++ EY L + PG+++S E Q
Sbjct: 102 NIINLLGACTQ--DGPLYVIVEYASK--GNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 233 --VKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLA-SFYDPDQNQPL 289
V C QL G+++ S+ +HRD+ N+L+ N ++KIADFGLA + D +
Sbjct: 158 DLVSC-TYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 216
Query: 290 TSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYA--GKPIMPGRTEVEQLHKIFK 347
T+ + + + PE L Y + D+WS G ++ E++ G P PG VE+L K+ K
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQS-DVWSFGVLMWEIFTLGGSPY-PG-IPVEELFKLLK 273
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 103/230 (44%), Gaps = 25/230 (10%)
Query: 132 FEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINV 191
+E +++G G + V R D + VA+K+ R L P++ EI I+++L+H NV
Sbjct: 17 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCR-QELSPKNRERWCLEIQIMKKLNHPNV 75
Query: 192 IK-------LEGLVTSRMSCSLYLVFEYMEHD-----LAGLASHPGLKFSEAQVKCYMQQ 239
+ L+ L + + L EY E L + GLK E ++ +
Sbjct: 76 VSAREVPDGLQKLAPNDLP---LLAMEYCEGGDLRKYLNQFENCCGLK--EGPIRTLLSD 130
Query: 240 LLCGLDHCHSRGVLHRDIKGSNLLID---NNGILKIADFGLASFYDPDQNQPLTSRVVTL 296
+ L + H ++HRD+K N+++ I KI D G A + DQ + T V TL
Sbjct: 131 ISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAK--ELDQGELCTEFVGTL 188
Query: 297 WYRPPELLLGATYYGTAVDLWSTGCILAELYAG-KPIMPGRTEVEQLHKI 345
Y PE LL Y VD WS G + E G +P +P V+ K+
Sbjct: 189 QYLAPE-LLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKV 237
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 95/224 (42%), Gaps = 10/224 (4%)
Query: 130 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKV-RFDNLEPESVRFMAREIHILRRLDH 188
D FE L IG+G +S V + ++ A+K + ++D L+ V E +L D
Sbjct: 61 DDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDR 120
Query: 189 INVIKLEGLVTSRMSCSLYLVFEY-MEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHC 247
+ +L + LYLV EY + DL L S G + + Y+ +++ +D
Sbjct: 121 RWITQLH--FAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSV 178
Query: 248 HSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGA 307
H G +HRDIK N+L+D G +++ADFG D V T Y PE+L
Sbjct: 179 HRLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAV 238
Query: 308 TYYGTA------VDLWSTGCILAELYAGKPIMPGRTEVEQLHKI 345
D W+ G E++ G+ + E KI
Sbjct: 239 GGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKI 282
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 103/228 (45%), Gaps = 13/228 (5%)
Query: 124 WVPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHIL 183
W R D K K+G G Y VY VA+K ++ D +E E +E ++
Sbjct: 10 WEMERTDITMK-HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLKEAAVM 65
Query: 184 RRLDHINVIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYM-QQLL 241
+ + H N+++L G+ T Y++ E+M + +L + A V YM Q+
Sbjct: 66 KEIKHPNLVQLLGVCTRE--PPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS 123
Query: 242 CGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPP 301
+++ + +HRD+ N L+ N ++K+ADFGL+ D + + P
Sbjct: 124 SAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAP 183
Query: 302 ELLLGATYYGTAVDLWSTGCILAEL--YAGKPIMPGRTEVEQLHKIFK 347
E L + D+W+ G +L E+ Y P PG ++ Q++++ +
Sbjct: 184 E-SLAYNKFSIKSDVWAFGVLLWEIATYGMSPY-PG-IDLSQVYELLE 228
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 104/230 (45%), Gaps = 25/230 (10%)
Query: 132 FEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINV 191
+E +++G G + V R D + VA+K+ R L P++ EI I+++L+H NV
Sbjct: 16 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCR-QELSPKNRERWCLEIQIMKKLNHPNV 74
Query: 192 IK-------LEGLVTSRMSCSLYLVFEYMEHD-----LAGLASHPGLKFSEAQVKCYMQQ 239
+ L+ L + + L EY E L + GLK E ++ +
Sbjct: 75 VSAREVPDGLQKLAPNDLP---LLAMEYCEGGDLRKYLNQFENCCGLK--EGPIRTLLSD 129
Query: 240 LLCGLDHCHSRGVLHRDIKGSNLLID---NNGILKIADFGLASFYDPDQNQPLTSRVVTL 296
+ L + H ++HRD+K N+++ I KI D G A + DQ + T V TL
Sbjct: 130 ISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAK--ELDQGELCTEFVGTL 187
Query: 297 WYRPPELLLGATYYGTAVDLWSTGCILAELYAG-KPIMPGRTEVEQLHKI 345
Y PELL Y T VD WS G + E G +P +P V+ K+
Sbjct: 188 QYLAPELLEQKKYTVT-VDYWSFGTLAFECITGFRPFLPNWQPVQWHGKV 236
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 93/209 (44%), Gaps = 9/209 (4%)
Query: 120 AIQGWVPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMARE 179
++ W R D K K+G G Y VY VA+K ++ D +E E +E
Sbjct: 2 SLDKWEMERTDITMK-HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLKE 57
Query: 180 IHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYM- 237
+++ + H N+++L G+ T Y++ E+M + +L + A V YM
Sbjct: 58 AAVMKEIKHPNLVQLLGVCTRE--PPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMA 115
Query: 238 QQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLW 297
Q+ +++ + +HRD+ N L+ N ++K+ADFGL+ D +
Sbjct: 116 TQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIK 175
Query: 298 YRPPELLLGATYYGTAVDLWSTGCILAEL 326
+ PE L + D+W+ G +L E+
Sbjct: 176 WTAPE-SLAYNKFSIKSDVWAFGVLLWEI 203
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 103/228 (45%), Gaps = 13/228 (5%)
Query: 124 WVPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHIL 183
W R D K K+G G Y VY VA+K ++ D +E E +E ++
Sbjct: 212 WEMERTDITMK-HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLKEAAVM 267
Query: 184 RRLDHINVIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYM-QQLL 241
+ + H N+++L G+ T Y++ E+M + +L + A V YM Q+
Sbjct: 268 KEIKHPNLVQLLGVCTRE--PPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS 325
Query: 242 CGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPP 301
+++ + +HR++ N L+ N ++K+ADFGL+ D + + P
Sbjct: 326 SAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAP 385
Query: 302 ELLLGATYYGTAVDLWSTGCILAEL--YAGKPIMPGRTEVEQLHKIFK 347
E L + D+W+ G +L E+ Y P PG ++ Q++++ +
Sbjct: 386 E-SLAYNKFSIKSDVWAFGVLLWEIATYGMSP-YPG-IDLSQVYELLE 430
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 103/228 (45%), Gaps = 13/228 (5%)
Query: 124 WVPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHIL 183
W R D K K+G G Y VY VA+K ++ D +E E +E ++
Sbjct: 8 WEMERTDITMK-HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLKEAAVM 63
Query: 184 RRLDHINVIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYM-QQLL 241
+ + H N+++L G+ T Y++ E+M + +L + A V YM Q+
Sbjct: 64 KEIKHPNLVQLLGVCTRE--PPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQIS 121
Query: 242 CGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPP 301
+++ + +HRD+ N L+ N ++K+ADFGL+ D + + P
Sbjct: 122 SAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAP 181
Query: 302 ELLLGATYYGTAVDLWSTGCILAEL--YAGKPIMPGRTEVEQLHKIFK 347
E L + D+W+ G +L E+ Y P PG ++ Q++++ +
Sbjct: 182 E-SLAYNKFSIKSDVWAFGVLLWEIATYGMSP-YPG-IDLSQVYELLE 226
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 99/202 (49%), Gaps = 18/202 (8%)
Query: 137 KIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINVIKLEG 196
+IG G++ VY+ + VA+K + P+ ++ E+ +LR+ H+N++ G
Sbjct: 20 RIGSGSFGTVYKGK---WHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 76
Query: 197 LVTSRMSCSLYLVFEYMEHDLAGLASHPGL---KFSEAQVKCYMQQLLCGLDHCHSRGVL 253
T L +V ++ E + L H + KF ++ +Q G+D+ H++ ++
Sbjct: 77 YSTKP---QLAIVTQWCEG--SSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSII 131
Query: 254 HRDIKGSNLLIDNNGILKIADFGLAS----FYDPDQNQPLTSRVVTLWYRPPEL-LLGAT 308
HRD+K +N+ + + +KI DFGLA+ + Q + L+ + LW P + +
Sbjct: 132 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSI--LWMAPEVIRMQDKN 189
Query: 309 YYGTAVDLWSTGCILAELYAGK 330
Y D+++ G +L EL G+
Sbjct: 190 PYSFQSDVYAFGIVLYELMTGQ 211
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 103/228 (45%), Gaps = 13/228 (5%)
Query: 124 WVPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHIL 183
W R D K K+G G Y VY VA+K ++ D +E E +E ++
Sbjct: 12 WEMERTDITMK-HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLKEAAVM 67
Query: 184 RRLDHINVIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYM-QQLL 241
+ + H N+++L G+ T Y++ E+M + +L + A V YM Q+
Sbjct: 68 KEIKHPNLVQLLGVCTRE--PPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS 125
Query: 242 CGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPP 301
+++ + +HRD+ N L+ N ++K+ADFGL+ D + + P
Sbjct: 126 SAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAP 185
Query: 302 ELLLGATYYGTAVDLWSTGCILAEL--YAGKPIMPGRTEVEQLHKIFK 347
E L + D+W+ G +L E+ Y P PG ++ Q++++ +
Sbjct: 186 E-SLAYNKFSIKSDVWAFGVLLWEIATYGMSPY-PG-IDLSQVYELLE 230
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 132/293 (45%), Gaps = 36/293 (12%)
Query: 135 LDKIGQGTYSNVYRAR-DLDQKKIV--ALKKVRFDNL-EPESVRFMAREIHILRRLDHIN 190
L+K+G G++ V R D K V A+K ++ D L +PE++ RE++ + LDH N
Sbjct: 23 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 82
Query: 191 VIKLEGLVTSRMSCSLYLVFEY--MEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCH 248
+I+L G+V ++ + +V E + L L H G F + Y Q+ G+ +
Sbjct: 83 LIRLYGVV---LTPPMKMVTELAPLGSLLDRLRKHQG-HFLLGTLSRYAVQVAEGMGYLE 138
Query: 249 SRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTS--RVVTLWYRPPELLLG 306
S+ +HRD+ NLL+ ++KI DFGL + + + R V + PE L
Sbjct: 139 SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 198
Query: 307 ATYYGTAVDLWSTGCILAELYA-GKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSKLPHA 365
T + A D W G L E++ G+ G + LHKI K +LP
Sbjct: 199 RT-FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK----------EGERLPRP 247
Query: 366 TIFKPQQPYK---RCVAETFKDFPAPALALMETLLSIDPADRGSAASALRSEF 415
PQ Y +C A +D P +AL + LL P D +R+EF
Sbjct: 248 EDC-PQDIYNVMVQCWAHKPEDRPT-FVALRDFLLEAQPTD-------MRAEF 291
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 82/344 (23%), Positives = 143/344 (41%), Gaps = 76/344 (22%)
Query: 130 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHI 189
++F + K+G GT+ V + +D KK A+K VR N++ + R E IL+++ +
Sbjct: 35 NAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVR--NIKKYT-RSAKIEADILKKIQND 91
Query: 190 NV-----IKLEG-LVTSRMSCSLYLVFEYMEHDLAGLASHPGLK-FSEAQVKCYMQQLLC 242
++ +K G + C L+FE + L + + F +K Y ++L
Sbjct: 92 DINNNNIVKYHGKFMYYDHMC---LIFEPLGPSLYEIITRNNYNGFHIEDIKLYCIEILK 148
Query: 243 GLDHCHSRGVLHRDIKGSNLLIDN--------------------------NGILKIADFG 276
L++ + H D+K N+L+D+ GI K+ DFG
Sbjct: 149 ALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGI-KLIDFG 207
Query: 277 LASFYDPDQNQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGR 336
A+F + +R YR PE++L + + D+WS GC+LAELY G +
Sbjct: 208 CATFKSDYHGSIINTRQ----YRAPEVILNLGW-DVSSDMWSFGCVLAELYTGSLLFRTH 262
Query: 337 TEVEQL------------HKIFKLCGSPSEDYWRKSKLP-----HATIFKPQQPYKRCV- 378
+E L + +++ + Y K +L +A+ + K+C+
Sbjct: 263 EHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLP 322
Query: 379 ------AETFKDFPAPALALMETLLSIDPADRGSAASALRSEFF 416
E F DF + ++L IDP R S A L+ +F
Sbjct: 323 LYKIIKHELFCDF-------LYSILQIDPTLRPSPAELLKHKFL 359
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 99/202 (49%), Gaps = 18/202 (8%)
Query: 137 KIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINVIKLEG 196
+IG G++ VY+ + VA+K + P+ ++ E+ +LR+ H+N++ G
Sbjct: 20 RIGSGSFGTVYKGK---WHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 76
Query: 197 LVTSRMSCSLYLVFEYMEHDLAGLASHPGL---KFSEAQVKCYMQQLLCGLDHCHSRGVL 253
T L +V ++ E + L H + KF ++ +Q G+D+ H++ ++
Sbjct: 77 YSTKP---QLAIVTQWCEG--SSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSII 131
Query: 254 HRDIKGSNLLIDNNGILKIADFGLAS----FYDPDQNQPLTSRVVTLWYRPPEL-LLGAT 308
HRD+K +N+ + + +KI DFGLA+ + Q + L+ + LW P + +
Sbjct: 132 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSI--LWMAPEVIRMQDKN 189
Query: 309 YYGTAVDLWSTGCILAELYAGK 330
Y D+++ G +L EL G+
Sbjct: 190 PYSFQSDVYAFGIVLYELMTGQ 211
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 103/228 (45%), Gaps = 13/228 (5%)
Query: 124 WVPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHIL 183
W R D K K+G G Y VY VA+K ++ D +E E +E ++
Sbjct: 21 WEMERTDITMK-HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLKEAAVM 76
Query: 184 RRLDHINVIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYM-QQLL 241
+ + H N+++L G+ T Y++ E+M + +L + A V YM Q+
Sbjct: 77 KEIKHPNLVQLLGVCTRE--PPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS 134
Query: 242 CGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPP 301
+++ + +HRD+ N L+ N ++K+ADFGL+ D + + P
Sbjct: 135 SAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAP 194
Query: 302 ELLLGATYYGTAVDLWSTGCILAEL--YAGKPIMPGRTEVEQLHKIFK 347
E L + D+W+ G +L E+ Y P PG ++ Q++++ +
Sbjct: 195 E-SLAYNKFSIKSDVWAFGVLLWEIATYGMSPY-PG-IDLSQVYELLE 239
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 103/228 (45%), Gaps = 13/228 (5%)
Query: 124 WVPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHIL 183
W R D K K+G G Y VY VA+K ++ D +E E +E ++
Sbjct: 13 WEMERTDITMK-HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLKEAAVM 68
Query: 184 RRLDHINVIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYM-QQLL 241
+ + H N+++L G+ T Y++ E+M + +L + A V YM Q+
Sbjct: 69 KEIKHPNLVQLLGVCTRE--PPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS 126
Query: 242 CGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPP 301
+++ + +HRD+ N L+ N ++K+ADFGL+ D + + P
Sbjct: 127 SAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAP 186
Query: 302 ELLLGATYYGTAVDLWSTGCILAEL--YAGKPIMPGRTEVEQLHKIFK 347
E L + D+W+ G +L E+ Y P PG ++ Q++++ +
Sbjct: 187 E-SLAYNKFSIKSDVWAFGVLLWEIATYGMSPY-PG-IDLSQVYELLE 231
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 99/202 (49%), Gaps = 18/202 (8%)
Query: 137 KIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINVIKLEG 196
+IG G++ VY+ + VA+K + P+ ++ E+ +LR+ H+N++ G
Sbjct: 17 RIGSGSFGTVYKGK---WHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 73
Query: 197 LVTSRMSCSLYLVFEYMEHDLAGLASHPGL---KFSEAQVKCYMQQLLCGLDHCHSRGVL 253
T L +V ++ E + L H + KF ++ +Q G+D+ H++ ++
Sbjct: 74 YSTKP---QLAIVTQWCEG--SSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSII 128
Query: 254 HRDIKGSNLLIDNNGILKIADFGLAS----FYDPDQNQPLTSRVVTLWYRPPEL-LLGAT 308
HRD+K +N+ + + +KI DFGLA+ + Q + L+ + LW P + +
Sbjct: 129 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSI--LWMAPEVIRMQDKN 186
Query: 309 YYGTAVDLWSTGCILAELYAGK 330
Y D+++ G +L EL G+
Sbjct: 187 PYSFQSDVYAFGIVLYELMTGQ 208
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 109/225 (48%), Gaps = 14/225 (6%)
Query: 125 VPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILR 184
+PR +S + + K+G G + V+ + K VA+K ++ + SV+ E ++++
Sbjct: 9 IPR--ESIKLVKKLGAGQFGEVWMGYYNNSTK-VAVKTLKPGTM---SVQAFLEEANLMK 62
Query: 185 RLDHINVIKLEGLVTSRMSCSLYLVFEYMEHD--LAGLASHPGLKFSEAQVKCYMQQLLC 242
L H +++L +VT +Y++ E+M L L S G K ++ + Q+
Sbjct: 63 TLQHDKLVRLYAVVTKEEP--IYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAE 120
Query: 243 GLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFY-DPDQNQPLTSRVVTLWYRPP 301
G+ + + +HRD++ +N+L+ + + KIADFGLA D + ++ W P
Sbjct: 121 GMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPE 180
Query: 302 ELLLGATYYGTAVDLWSTGCILAELYA-GKPIMPGRTEVEQLHKI 345
+ G + ++WS G +L E+ GK PGRT + + +
Sbjct: 181 AINFGC--FTIKSNVWSFGILLYEIVTYGKIPYPGRTNADVMSAL 223
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 99/202 (49%), Gaps = 18/202 (8%)
Query: 137 KIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINVIKLEG 196
+IG G++ VY+ + VA+K + P+ ++ E+ +LR+ H+N++ G
Sbjct: 15 RIGSGSFGTVYKGK---WHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 71
Query: 197 LVTSRMSCSLYLVFEYMEHDLAGLASHPGL---KFSEAQVKCYMQQLLCGLDHCHSRGVL 253
T L +V ++ E + L H + KF ++ +Q G+D+ H++ ++
Sbjct: 72 YSTKP---QLAIVTQWCEG--SSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSII 126
Query: 254 HRDIKGSNLLIDNNGILKIADFGLAS----FYDPDQNQPLTSRVVTLWYRPPEL-LLGAT 308
HRD+K +N+ + + +KI DFGLA+ + Q + L+ + LW P + +
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSI--LWMAPEVIRMQDKN 184
Query: 309 YYGTAVDLWSTGCILAELYAGK 330
Y D+++ G +L EL G+
Sbjct: 185 PYSFQSDVYAFGIVLYELMTGQ 206
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 98/221 (44%), Gaps = 6/221 (2%)
Query: 128 RADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNL--EPESVRFMAREIHILRR 185
+ F L IG+G++ V AR ++ A+K ++ + + E M+ +L+
Sbjct: 36 KPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKN 95
Query: 186 LDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLD 245
+ H ++ L + + + LY V +Y+ F E + + Y ++ L
Sbjct: 96 VKHPFLVGLH--FSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALG 153
Query: 246 HCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLL 305
+ HS +++RD+K N+L+D+ G + + DFGL + + N ++ T Y PE+L
Sbjct: 154 YLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCK-ENIEHNSTTSTFCGTPEYLAPEVLH 212
Query: 306 GATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIF 346
Y T VD W G +L E+ G P R E I
Sbjct: 213 KQPYDRT-VDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNIL 252
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 75/157 (47%), Gaps = 13/157 (8%)
Query: 197 LVTSRMSC-----SLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSR 250
+T SC LY V EY+ DL G +F E Y ++ GL S+
Sbjct: 82 FLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVG-RFKEPHAVFYAAEIAIGLFFLQSK 140
Query: 251 GVLHRDIKGSNLLIDNNGILKIADFGLA--SFYDPDQNQPLTSRVVTLWYRPPELLLGAT 308
G+++RD+K N+++D+ G +KIADFG+ + +D + T Y PE ++
Sbjct: 141 GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCG---TPDYIAPE-IIAYQ 196
Query: 309 YYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKI 345
YG +VD W+ G +L E+ AG+ G E E I
Sbjct: 197 PYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSI 233
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 103/228 (45%), Gaps = 13/228 (5%)
Query: 124 WVPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHIL 183
W R D K K+G G Y VY VA+K ++ D +E E +E ++
Sbjct: 8 WEMERTDITMK-HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLKEAAVM 63
Query: 184 RRLDHINVIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYM-QQLL 241
+ + H N+++L G+ T Y++ E+M + +L + A V YM Q+
Sbjct: 64 KEIKHPNLVQLLGVCTRE--PPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS 121
Query: 242 CGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPP 301
+++ + +HRD+ N L+ N ++K+ADFGL+ D + + P
Sbjct: 122 SAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAP 181
Query: 302 ELLLGATYYGTAVDLWSTGCILAEL--YAGKPIMPGRTEVEQLHKIFK 347
E L + D+W+ G +L E+ Y P PG ++ Q++++ +
Sbjct: 182 E-SLAYNKFSIKSDVWAFGVLLWEIATYGMSPY-PG-IDLSQVYELLE 226
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 99/202 (49%), Gaps = 18/202 (8%)
Query: 137 KIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINVIKLEG 196
+IG G++ VY+ + VA+K + P+ ++ E+ +LR+ H+N++ G
Sbjct: 15 RIGSGSFGTVYKGK---WHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 71
Query: 197 LVTSRMSCSLYLVFEYMEHDLAGLASHPGL---KFSEAQVKCYMQQLLCGLDHCHSRGVL 253
T L +V ++ E + L H + KF ++ +Q G+D+ H++ ++
Sbjct: 72 YSTKP---QLAIVTQWCEG--SSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSII 126
Query: 254 HRDIKGSNLLIDNNGILKIADFGLAS----FYDPDQNQPLTSRVVTLWYRPPEL-LLGAT 308
HRD+K +N+ + + +KI DFGLA+ + Q + L+ + LW P + +
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSI--LWMAPEVIRMQDKN 184
Query: 309 YYGTAVDLWSTGCILAELYAGK 330
Y D+++ G +L EL G+
Sbjct: 185 PYSFQSDVYAFGIVLYELMTGQ 206
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 93/209 (44%), Gaps = 9/209 (4%)
Query: 120 AIQGWVPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMARE 179
++ W R D K K+G G + VY VA+K ++ D +E E +E
Sbjct: 2 SLDKWEMERTDITMK-HKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLKE 57
Query: 180 IHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYM- 237
+++ + H N+++L G+ T Y++ E+M + +L + A V YM
Sbjct: 58 AAVMKEIKHPNLVQLLGVCTRE--PPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMA 115
Query: 238 QQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLW 297
Q+ +++ + +HRD+ N L+ N ++K+ADFGL+ D +
Sbjct: 116 TQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIK 175
Query: 298 YRPPELLLGATYYGTAVDLWSTGCILAEL 326
+ PE L + D+W+ G +L E+
Sbjct: 176 WTAPE-SLAYNKFSIKSDVWAFGVLLWEI 203
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 91/370 (24%), Positives = 144/370 (38%), Gaps = 98/370 (26%)
Query: 132 FEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLD---- 187
+ + K+G G +S V+ D+ K+ VA+K V+ E+ + + +R D
Sbjct: 33 YHVIRKLGWGHFSTVWLCWDMQGKRFVAMKVVKSAQHYTETALDEIKLLKCVRESDPSDP 92
Query: 188 --HINVIKLEGLVTSRMS-CSLYLVFEYMEHDLAGL---ASHPGLKFSEAQVKCYMQQLL 241
+ V ++ S M+ + +VFE + H L +++ GL VK ++Q+L
Sbjct: 93 NKDMVVQLIDDFKISGMNGIHVCMVFEVLGHHLLKWIIKSNYQGLPVR--CVKSIIRQVL 150
Query: 242 CGLDHCHSRG-VLHRDIKGSNLL--IDNNGI----------------------------- 269
GLD+ HS+ ++H DIK N+L +D+ +
Sbjct: 151 QGLDYLHSKCKIIHTDIKPENILMCVDDAYVRRMAAEATEWQKAGAPPPSGSAVSTAPAA 210
Query: 270 ----------------LKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGATYYGTA 313
+KIAD G A + ++ T + T YR E+L+GA Y T
Sbjct: 211 DLLVNPLDPRNADKIRVKIADLGNACWV----HKHFTEDIQTRQYRSIEVLIGAGY-STP 265
Query: 314 VDLWSTGCILAELYAGKPIMP-------GRTEVEQLHKI---------FKLCGSPSEDYW 357
D+WST C+ EL G + R E H I F L G S +++
Sbjct: 266 ADIWSTACMAFELATGDYLFEPHSGEDYSRDEDHIAHIIELLGSIPRHFALSGKYSREFF 325
Query: 358 -RKSKLPHATIFKPQQPYKRCV---------AETFKDFPAPALALMETLLSIDPADRGSA 407
R+ +L H T KP + V A F DF P L ++ P R SA
Sbjct: 326 NRRGELRHITKLKPWSLFDVLVEKYGWPHEDAAQFTDFLIPMLEMV-------PEKRASA 378
Query: 408 ASALRSEFFT 417
LR +
Sbjct: 379 GECLRHPWLN 388
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 115/240 (47%), Gaps = 39/240 (16%)
Query: 138 IGQGTYSNVYRAR----DLDQKK---IVALKKVRFDNLEPESVRFMAREIHILRRL-DHI 189
+G+G + V A D D+ K VA+K ++ D E + + + E+ +++ + H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATE-KDLSDLVSEMEMMKMIGKHK 101
Query: 190 NVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASH------PGLKFS-------EAQ---- 232
N+I L G T LY++ EY L + PG+++S E Q
Sbjct: 102 NIINLLGACTQ--DGPLYVIVEYASK--GNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 233 --VKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLA-SFYDPDQNQPL 289
V C QL G+++ S+ +HRD+ N+L+ N ++KIADFGLA + D +
Sbjct: 158 DLVSC-TYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKT 216
Query: 290 TSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYA--GKPIMPGRTEVEQLHKIFK 347
T+ + + + PE L Y + D+WS G ++ E++ G P PG VE+L K+ K
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQS-DVWSFGVLMWEIFTLGGSPY-PG-IPVEELFKLLK 273
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 100/207 (48%), Gaps = 22/207 (10%)
Query: 136 DKIGQGTYSNVYRA----RDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINV 191
+K+G+G + VY+ + KK+ A+ + + L+ + +EI ++ + H N+
Sbjct: 37 NKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQ----FDQEIKVMAKCQHENL 92
Query: 192 IKLEGLVTSRMSCSLYLVFEYMEHD-----LAGLASHPGLKFSEAQVKCYMQQ-LLCGLD 245
++L G S L LV+ YM + L+ L P L + ++C + Q G++
Sbjct: 93 VELLGF--SSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSW---HMRCKIAQGAANGIN 147
Query: 246 HCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVV-TLWYRPPELL 304
H +HRDIK +N+L+D KI+DFGLA + + R+V T Y PE L
Sbjct: 148 FLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPEAL 207
Query: 305 LGATYYGTAVDLWSTGCILAELYAGKP 331
G + D++S G +L E+ G P
Sbjct: 208 RGEITPKS--DIYSFGVVLLEIITGLP 232
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 103/228 (45%), Gaps = 13/228 (5%)
Query: 124 WVPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHIL 183
W R D K K+G G Y VY VA+K ++ D +E E +E ++
Sbjct: 8 WEMERTDITMK-HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLKEAAVM 63
Query: 184 RRLDHINVIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYM-QQLL 241
+ + H N+++L G+ T Y++ E+M + +L + A V YM Q+
Sbjct: 64 KEIKHPNLVQLLGVCTRE--PPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS 121
Query: 242 CGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPP 301
+++ + +HRD+ N L+ N ++K+ADFGL+ D + + P
Sbjct: 122 SAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAP 181
Query: 302 ELLLGATYYGTAVDLWSTGCILAEL--YAGKPIMPGRTEVEQLHKIFK 347
E L + D+W+ G +L E+ Y P PG ++ Q++++ +
Sbjct: 182 E-SLAYNKFSIKSDVWAFGVLLWEIATYGMSPY-PG-IDLSQVYELLE 226
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 103/211 (48%), Gaps = 24/211 (11%)
Query: 137 KIGQGTYSNVYRARDLD-----QKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINV 191
++G+G + V+ A + K +VA+K ++ + + + RE +L L H ++
Sbjct: 20 ELGEGAFGKVFLAECYNLCPEQDKILVAVKTLK--DASDNARKDFHREAELLTNLQHEHI 77
Query: 192 IKLEGLVTSRMSCSLYLVFEYMEH------------DLAGLA-SHPGLKFSEAQVKCYMQ 238
+K G+ L +VFEYM+H D +A +P + +++Q+ Q
Sbjct: 78 VKFYGVCVE--GDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQ 135
Query: 239 QLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLA-SFYDPDQNQPLTSRVVTLW 297
Q+ G+ + S+ +HRD+ N L+ N ++KI DFG++ Y D + ++ +
Sbjct: 136 QIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIR 195
Query: 298 YRPPELLLGATYYGTAVDLWSTGCILAELYA 328
+ PPE ++ + T D+WS G +L E++
Sbjct: 196 WMPPESIMYRK-FTTESDVWSLGVVLWEIFT 225
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 127/281 (45%), Gaps = 29/281 (10%)
Query: 135 LDKIGQGTYSNVYRAR-DLDQKKIV--ALKKVRFDNL-EPESVRFMAREIHILRRLDHIN 190
L+K+G G++ V R D K V A+K ++ D L +PE++ RE++ + LDH N
Sbjct: 17 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 76
Query: 191 VIKLEGLVTSRMSCSLYLVFEY--MEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCH 248
+I+L G+V ++ + +V E + L L H G F + Y Q+ G+ +
Sbjct: 77 LIRLYGVV---LTPPMKMVTELAPLGSLLDRLRKHQG-HFLLGTLSRYAVQVAEGMGYLE 132
Query: 249 SRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTS--RVVTLWYRPPELLLG 306
S+ +HRD+ NLL+ ++KI DFGL + + + R V + PE L
Sbjct: 133 SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 192
Query: 307 ATYYGTAVDLWSTGCILAELYA-GKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSKLPHA 365
T + A D W G L E++ G+ G + LHKI K +LP
Sbjct: 193 RT-FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK----------EGERLPRP 241
Query: 366 TIFKPQQPYK---RCVAETFKDFPAPALALMETLLSIDPAD 403
PQ Y +C A +D P +AL + LL P D
Sbjct: 242 EDC-PQDIYNVMVQCWAHKPEDRPT-FVALRDFLLEAQPTD 280
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 64/128 (50%), Gaps = 7/128 (5%)
Query: 205 SLYLVFEYME--HDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVLHRDIKGSNL 262
S L+ E E DL + G E + + Q+L + HCH+ GVLHRDIK N+
Sbjct: 130 SFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENI 188
Query: 263 LID-NNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGC 321
LID N G LK+ DFG + ++ T T Y PPE + Y+G + +WS G
Sbjct: 189 LIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGI 245
Query: 322 ILAELYAG 329
+L ++ G
Sbjct: 246 LLYDMVCG 253
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 126/304 (41%), Gaps = 37/304 (12%)
Query: 130 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDN-LEPESVRFMAREIHILRRLDH 188
D ++ +++G G + V+R + A K V + + E+VR +EI + L H
Sbjct: 51 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVR---KEIQTMSVLRH 107
Query: 189 INVIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHC 247
++ L + +++E+M +L + K SE + YM+Q+ GL H
Sbjct: 108 PTLVNLHDAFED--DNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHM 165
Query: 248 HSRGVLHRDIKGSNLLIDN--NGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLL 305
H +H D+K N++ + LK+ DFGL + DP Q+ +T+ T + PE+
Sbjct: 166 HENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTG--TAEFAAPEVAE 223
Query: 306 GATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSKLPHA 365
G G D+WS G + L +G G + E L + K C +D
Sbjct: 224 GKP-VGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNV-KSCDWNMDD---------- 271
Query: 366 TIFKPQQPYKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALRSEFFTMKPLPCDP 425
+ F ++E KDF + LL DP R + AL + T P
Sbjct: 272 SAFS-------GISEDGKDF-------IRKLLLADPNTRMTIHQALEHPWLTPGNAPGRD 317
Query: 426 SSLP 429
S +P
Sbjct: 318 SQIP 321
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 100/207 (48%), Gaps = 22/207 (10%)
Query: 136 DKIGQGTYSNVYRA----RDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINV 191
+K+G+G + VY+ + KK+ A+ + + L+ + +EI ++ + H N+
Sbjct: 31 NKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQ----FDQEIKVMAKCQHENL 86
Query: 192 IKLEGLVTSRMSCSLYLVFEYMEHD-----LAGLASHPGLKFSEAQVKCYMQQ-LLCGLD 245
++L G S L LV+ YM + L+ L P L + ++C + Q G++
Sbjct: 87 VELLGF--SSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSW---HMRCKIAQGAANGIN 141
Query: 246 HCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVV-TLWYRPPELL 304
H +HRDIK +N+L+D KI+DFGLA + + R+V T Y PE L
Sbjct: 142 FLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPEAL 201
Query: 305 LGATYYGTAVDLWSTGCILAELYAGKP 331
G + D++S G +L E+ G P
Sbjct: 202 RGEITPKS--DIYSFGVVLLEIITGLP 226
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 115/240 (47%), Gaps = 39/240 (16%)
Query: 138 IGQGTYSNVYRAR----DLDQKK---IVALKKVRFDNLEPESVRFMAREIHILRRL-DHI 189
+G+G + V A D D+ K VA+K ++ D E + + + E+ +++ + H
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATE-KDLSDLVSEMEMMKMIGKHK 147
Query: 190 NVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASH------PGLKFS-------EAQ---- 232
N+I L G T LY++ EY L + PG+++S E Q
Sbjct: 148 NIINLLGACTQ--DGPLYVIVEYASK--GNLREYLRARRPPGMEYSYDINRVPEEQMTFK 203
Query: 233 --VKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLA-SFYDPDQNQPL 289
V C QL G+++ S+ +HRD+ N+L+ N ++KIADFGLA + D +
Sbjct: 204 DLVSC-TYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 262
Query: 290 TSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYA--GKPIMPGRTEVEQLHKIFK 347
T+ + + + PE L Y + D+WS G ++ E++ G P PG VE+L K+ K
Sbjct: 263 TNGRLPVKWMAPEALFDRVYTHQS-DVWSFGVLMWEIFTLGGSPY-PG-IPVEELFKLLK 319
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 94/202 (46%), Gaps = 23/202 (11%)
Query: 137 KIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINVIKLEG 196
++G+G++ V+R D A+KKVR + F A E+ L ++ L G
Sbjct: 100 RLGRGSFGEVHRMEDKQTGFQCAVKKVRLEV-------FRAEELMACAGLTSPRIVPLYG 152
Query: 197 LVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVLHR 255
V R + + E +E L L G E + Y+ Q L GL++ HSR +LH
Sbjct: 153 AV--REGPWVNIFMELLEGGSLGQLVKEQGC-LPEDRALYYLGQALEGLEYLHSRRILHG 209
Query: 256 DIKGSNLLIDNNGI-LKIADFGLASFYDPDQNQPLTSRVVTLWYRP-------PELLLGA 307
D+K N+L+ ++G + DFG A PD L ++T Y P PE++LG
Sbjct: 210 DVKADNVLLSSDGSHAALCDFGHAVCLQPDG---LGKSLLTGDYIPGTETHMAPEVVLGR 266
Query: 308 TYYGTAVDLWSTGCILAELYAG 329
+ VD+WS+ C++ + G
Sbjct: 267 S-CDAKVDVWSSCCMMLHMLNG 287
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 126/304 (41%), Gaps = 37/304 (12%)
Query: 130 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDN-LEPESVRFMAREIHILRRLDH 188
D ++ +++G G + V+R + A K V + + E+VR +EI + L H
Sbjct: 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVR---KEIQTMSVLRH 213
Query: 189 INVIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHC 247
++ L + +++E+M +L + K SE + YM+Q+ GL H
Sbjct: 214 PTLVNLHDAFED--DNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHM 271
Query: 248 HSRGVLHRDIKGSNLLIDN--NGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLL 305
H +H D+K N++ + LK+ DFGL + DP Q+ +T+ T + PE+
Sbjct: 272 HENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTG--TAEFAAPEVAE 329
Query: 306 GATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSKLPHA 365
G G D+WS G + L +G G + E L + K C +D
Sbjct: 330 GKP-VGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNV-KSCDWNMDD---------- 377
Query: 366 TIFKPQQPYKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALRSEFFTMKPLPCDP 425
+ F ++E KDF + LL DP R + AL + T P
Sbjct: 378 SAFS-------GISEDGKDF-------IRKLLLADPNTRMTIHQALEHPWLTPGNAPGRD 423
Query: 426 SSLP 429
S +P
Sbjct: 424 SQIP 427
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 107/222 (48%), Gaps = 14/222 (6%)
Query: 135 LDKIGQGTYSNVYRAR-DLDQKKIV--ALKKVRFDNL-EPESVRFMAREIHILRRLDHIN 190
L+K+G G++ V R D K V A+K ++ D L +PE++ RE++ + LDH N
Sbjct: 13 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 72
Query: 191 VIKLEGLVTSRMSCSLYLVFEY--MEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCH 248
+I+L G+V ++ + +V E + L L H G F + Y Q+ G+ +
Sbjct: 73 LIRLYGVV---LTPPMKMVTELAPLGSLLDRLRKHQG-HFLLGTLSRYAVQVAEGMGYLE 128
Query: 249 SRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTS--RVVTLWYRPPELLLG 306
S+ +HRD+ NLL+ ++KI DFGL + + + R V + PE L
Sbjct: 129 SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKT 188
Query: 307 ATYYGTAVDLWSTGCILAELYA-GKPIMPGRTEVEQLHKIFK 347
T + A D W G L E++ G+ G + LHKI K
Sbjct: 189 RT-FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK 229
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 103/236 (43%), Gaps = 42/236 (17%)
Query: 126 PRRADSFEKLDKIGQGTYSNVYRARDLDQKKI-------VALKKVRFDNLEPESVRFMAR 178
PR F K+ +G G + V A K V + K + D+ E E+ +
Sbjct: 43 PRENLEFGKV--LGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREA---LMS 97
Query: 179 EIHILRRL-DHINVIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVK-- 234
E+ ++ +L H N++ L G T +S +YL+FEY + DL KFSE +++
Sbjct: 98 ELKMMTQLGSHENIVNLLGACT--LSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYE 155
Query: 235 --------------------CYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIAD 274
C+ Q+ G++ + +HRD+ N+L+ + ++KI D
Sbjct: 156 NQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICD 215
Query: 275 FGLASFYDPDQNQPL--TSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYA 328
FGLA D N + +R+ W P L G Y D+WS G +L E+++
Sbjct: 216 FGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGI--YTIKSDVWSYGILLWEIFS 269
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 115/240 (47%), Gaps = 39/240 (16%)
Query: 138 IGQGTYSNVYRAR----DLDQKK---IVALKKVRFDNLEPESVRFMAREIHILRRL-DHI 189
+G+G + V A D D+ K VA+K ++ D E + + + E+ +++ + H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATE-KDLSDLVSEMEMMKMIGKHK 101
Query: 190 NVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASH------PGLKFS-------EAQ---- 232
N+I L G T LY++ EY L + PG+++S E Q
Sbjct: 102 NIITLLGACTQ--DGPLYVIVEYASK--GNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 233 --VKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLA-SFYDPDQNQPL 289
V C QL G+++ S+ +HRD+ N+L+ N ++KIADFGLA + D +
Sbjct: 158 DLVSC-TYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 216
Query: 290 TSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYA--GKPIMPGRTEVEQLHKIFK 347
T+ + + + PE L Y + D+WS G ++ E++ G P PG VE+L K+ K
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQS-DVWSFGVLMWEIFTLGGSPY-PG-IPVEELFKLLK 273
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 115/240 (47%), Gaps = 39/240 (16%)
Query: 138 IGQGTYSNVYRAR--DLDQKK-----IVALKKVRFDNLEPESVRFMAREIHILRRL-DHI 189
+G+G + V A LD+ K VA+K ++ D E + ++ E+ +++ + H
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLIS-EMEMMKMIGKHK 94
Query: 190 NVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASH------PGLKFS-------EAQ---- 232
N+I L G T LY++ EY L + PGL+FS E Q
Sbjct: 95 NIINLLGACTQ--DGPLYVIVEYASK--GNLREYLQARRPPGLEFSFNPSHNPEEQLSSK 150
Query: 233 --VKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLA-SFYDPDQNQPL 289
V C Q+ G+++ S+ +HRD+ N+L+ + ++KIADFGLA + D +
Sbjct: 151 DLVSC-AYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKT 209
Query: 290 TSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYA--GKPIMPGRTEVEQLHKIFK 347
T+ + + + PE L Y + D+WS G +L E++ G P PG VE+L K+ K
Sbjct: 210 TNGRLPVKWMAPEALFDRIYTHQS-DVWSFGVLLWEIFTLGGSPY-PG-VPVEELFKLLK 266
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 115/240 (47%), Gaps = 39/240 (16%)
Query: 138 IGQGTYSNVYRAR----DLDQKK---IVALKKVRFDNLEPESVRFMAREIHILRRL-DHI 189
+G+G + V A D D+ K VA+K ++ D E + + + E+ +++ + H
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATE-KDLSDLVSEMEMMKMIGKHK 93
Query: 190 NVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASH------PGLKFS-------EAQ---- 232
N+I L G T LY++ EY L + PG+++S E Q
Sbjct: 94 NIINLLGACTQ--DGPLYVIVEYASK--GNLREYLRARRPPGMEYSYDINRVPEEQMTFK 149
Query: 233 --VKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLA-SFYDPDQNQPL 289
V C QL G+++ S+ +HRD+ N+L+ N ++KIADFGLA + D +
Sbjct: 150 DLVSC-TYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 208
Query: 290 TSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYA--GKPIMPGRTEVEQLHKIFK 347
T+ + + + PE L Y + D+WS G ++ E++ G P PG VE+L K+ K
Sbjct: 209 TNGRLPVKWMAPEALFDRVYTHQS-DVWSFGVLMWEIFTLGGSPY-PG-IPVEELFKLLK 265
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 115/240 (47%), Gaps = 39/240 (16%)
Query: 138 IGQGTYSNVYRAR----DLDQKK---IVALKKVRFDNLEPESVRFMAREIHILRRL-DHI 189
+G+G + V A D D+ K VA+K ++ D E + + + E+ +++ + H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATE-KDLSDLVSEMEMMKMIGKHK 101
Query: 190 NVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASH------PGLKFS-------EAQ---- 232
N+I L G T LY++ EY L + PG+++S E Q
Sbjct: 102 NIINLLGACTQ--DGPLYVIVEYASK--GNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 233 --VKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLA-SFYDPDQNQPL 289
V C QL G+++ S+ +HRD+ N+L+ N ++KIADFGLA + D +
Sbjct: 158 DLVSC-TYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNT 216
Query: 290 TSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYA--GKPIMPGRTEVEQLHKIFK 347
T+ + + + PE L Y + D+WS G ++ E++ G P PG VE+L K+ K
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQS-DVWSFGVLMWEIFTLGGSPY-PG-IPVEELFKLLK 273
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 115/240 (47%), Gaps = 39/240 (16%)
Query: 138 IGQGTYSNVYRAR----DLDQKK---IVALKKVRFDNLEPESVRFMAREIHILRRL-DHI 189
+G+G + V A D D+ K VA+K ++ D E + + + E+ +++ + H
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATE-KDLSDLVSEMEMMKMIGKHK 90
Query: 190 NVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASH------PGLKFS-------EAQ---- 232
N+I L G T LY++ EY L + PG+++S E Q
Sbjct: 91 NIINLLGACTQ--DGPLYVIVEYASK--GNLREYLRARRPPGMEYSYDINRVPEEQMTFK 146
Query: 233 --VKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLA-SFYDPDQNQPL 289
V C QL G+++ S+ +HRD+ N+L+ N ++KIADFGLA + D +
Sbjct: 147 DLVSC-TYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 205
Query: 290 TSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYA--GKPIMPGRTEVEQLHKIFK 347
T+ + + + PE L Y + D+WS G ++ E++ G P PG VE+L K+ K
Sbjct: 206 TNGRLPVKWMAPEALFDRVYTHQS-DVWSFGVLMWEIFTLGGSPY-PG-IPVEELFKLLK 262
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 115/240 (47%), Gaps = 39/240 (16%)
Query: 138 IGQGTYSNVYRAR----DLDQKK---IVALKKVRFDNLEPESVRFMAREIHILRRL-DHI 189
+G+G + V A D D+ K VA+K ++ D E + + + E+ +++ + H
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATE-KDLSDLVSEMEMMKMIGKHK 88
Query: 190 NVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASH------PGLKFS-------EAQ---- 232
N+I L G T LY++ EY L + PG+++S E Q
Sbjct: 89 NIINLLGACTQ--DGPLYVIVEYASK--GNLREYLRARRPPGMEYSYDINRVPEEQMTFK 144
Query: 233 --VKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLA-SFYDPDQNQPL 289
V C QL G+++ S+ +HRD+ N+L+ N ++KIADFGLA + D +
Sbjct: 145 DLVSC-TYQLARGMEYLASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKT 203
Query: 290 TSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYA--GKPIMPGRTEVEQLHKIFK 347
T+ + + + PE L Y + D+WS G ++ E++ G P PG VE+L K+ K
Sbjct: 204 TNGRLPVKWMAPEALFDRVYTHQS-DVWSFGVLMWEIFTLGGSPY-PG-IPVEELFKLLK 260
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 95/202 (47%), Gaps = 23/202 (11%)
Query: 137 KIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINVIKLEG 196
++G+G++ V+R D A+KKVR + F A E+ L ++ L G
Sbjct: 81 RLGRGSFGEVHRMEDKQTGFQCAVKKVRLEV-------FRAEELMACAGLTSPRIVPLYG 133
Query: 197 LVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVLHR 255
V ++++ E +E L L G E + Y+ Q L GL++ HSR +LH
Sbjct: 134 AVREGPWVNIFM--ELLEGGSLGQLVKEQGC-LPEDRALYYLGQALEGLEYLHSRRILHG 190
Query: 256 DIKGSNLLIDNNGI-LKIADFGLASFYDPDQNQPLTSRVVTLWYRP-------PELLLGA 307
D+K N+L+ ++G + DFG A PD L ++T Y P PE++LG
Sbjct: 191 DVKADNVLLSSDGSHAALCDFGHAVCLQPDG---LGKDLLTGDYIPGTETHMAPEVVLGR 247
Query: 308 TYYGTAVDLWSTGCILAELYAG 329
+ VD+WS+ C++ + G
Sbjct: 248 S-CDAKVDVWSSCCMMLHMLNG 268
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 115/240 (47%), Gaps = 39/240 (16%)
Query: 138 IGQGTYSNVYRAR----DLDQKK---IVALKKVRFDNLEPESVRFMAREIHILRRL-DHI 189
+G+G + V A D D+ K VA+K ++ D E + + + E+ +++ + H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATE-KDLSDLVSEMEMMKMIGKHK 101
Query: 190 NVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASH------PGLKFS-------EAQ---- 232
N+I L G T LY++ EY L + PG+++S E Q
Sbjct: 102 NIIHLLGACTQ--DGPLYVIVEYASK--GNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 233 --VKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLA-SFYDPDQNQPL 289
V C QL G+++ S+ +HRD+ N+L+ N ++KIADFGLA + D +
Sbjct: 158 DLVSC-TYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 216
Query: 290 TSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYA--GKPIMPGRTEVEQLHKIFK 347
T+ + + + PE L Y + D+WS G ++ E++ G P PG VE+L K+ K
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQS-DVWSFGVLMWEIFTLGGSPY-PG-IPVEELFKLLK 273
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 127/281 (45%), Gaps = 29/281 (10%)
Query: 135 LDKIGQGTYSNVYRAR-DLDQKKIV--ALKKVRFDNL-EPESVRFMAREIHILRRLDHIN 190
L+K+G G++ V R D K V A+K ++ D L +PE++ RE++ + LDH N
Sbjct: 13 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 72
Query: 191 VIKLEGLVTSRMSCSLYLVFEY--MEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCH 248
+I+L G+V ++ + +V E + L L H G F + Y Q+ G+ +
Sbjct: 73 LIRLYGVV---LTPPMKMVTELAPLGSLLDRLRKHQG-HFLLGTLSRYAVQVAEGMGYLE 128
Query: 249 SRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTS--RVVTLWYRPPELLLG 306
S+ +HRD+ NLL+ ++KI DFGL + + + R V + PE L
Sbjct: 129 SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 188
Query: 307 ATYYGTAVDLWSTGCILAELYA-GKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSKLPHA 365
T + A D W G L E++ G+ G + LHKI K +LP
Sbjct: 189 RT-FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK----------EGERLPRP 237
Query: 366 TIFKPQQPYK---RCVAETFKDFPAPALALMETLLSIDPAD 403
PQ Y +C A +D P +AL + LL P D
Sbjct: 238 EDC-PQDIYNVMVQCWAHKPEDRPT-FVALRDFLLEAQPTD 276
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 107/222 (48%), Gaps = 14/222 (6%)
Query: 135 LDKIGQGTYSNVYRAR-DLDQKKIV--ALKKVRFDNL-EPESVRFMAREIHILRRLDHIN 190
L+K+G G++ V R D K V A+K ++ D L +PE++ RE++ + LDH N
Sbjct: 17 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 76
Query: 191 VIKLEGLVTSRMSCSLYLVFEY--MEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCH 248
+I+L G+V ++ + +V E + L L H G F + Y Q+ G+ +
Sbjct: 77 LIRLYGVV---LTPPMKMVTELAPLGSLLDRLRKHQG-HFLLGTLSRYAVQVAEGMGYLE 132
Query: 249 SRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTS--RVVTLWYRPPELLLG 306
S+ +HRD+ NLL+ ++KI DFGL + + + R V + PE L
Sbjct: 133 SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 192
Query: 307 ATYYGTAVDLWSTGCILAELYA-GKPIMPGRTEVEQLHKIFK 347
T + A D W G L E++ G+ G + LHKI K
Sbjct: 193 RT-FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK 233
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 100/196 (51%), Gaps = 10/196 (5%)
Query: 135 LDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINVIKL 194
L ++G G + V + Q VA+K ++ ++ + E ++ L H +++L
Sbjct: 29 LKELGTGQFGVVKYGKWRGQYD-VAIKMIKEGSMSEDE---FIEEAKVMMNLSHEKLVQL 84
Query: 195 EGLVTSRMSCSLYLVFEYMEHD-LAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVL 253
G+ T + ++++ EYM + L +F Q+ + + +++ S+ L
Sbjct: 85 YGVCTKQRP--IFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFL 142
Query: 254 HRDIKGSNLLIDNNGILKIADFGLASF-YDPDQNQPLTSRVVTLWYRPPELLLGATYYGT 312
HRD+ N L+++ G++K++DFGL+ + D ++ + S+ W PPE+L+ + + +
Sbjct: 143 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRW-SPPEVLMYSK-FSS 200
Query: 313 AVDLWSTGCILAELYA 328
D+W+ G ++ E+Y+
Sbjct: 201 KSDIWAFGVLMWEIYS 216
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 114/240 (47%), Gaps = 39/240 (16%)
Query: 138 IGQGTYSNVYRAR----DLDQKK---IVALKKVRFDNLEPESVRFMAREIHILRRL-DHI 189
+G+G + V A D D+ K VA+K ++ D E + + + E+ +++ + H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATE-KDLSDLVSEMEMMKMIGKHK 101
Query: 190 NVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASH------PGLKFS-------EAQ---- 232
N+I L G T LY++ EY L + PG++ S E Q
Sbjct: 102 NIINLLGACTQ--DGPLYVIVEYASK--GNLREYLRARRPPGMEXSYDINRVPEEQMTFK 157
Query: 233 --VKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLA-SFYDPDQNQPL 289
V C QL G+++ S+ +HRD+ N+L+ N ++KIADFGLA + D +
Sbjct: 158 DLVSC-TYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKT 216
Query: 290 TSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYA--GKPIMPGRTEVEQLHKIFK 347
T+ + + + PE L Y + D+WS G ++ E++ G P PG VE+L K+ K
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQS-DVWSFGVLMWEIFTLGGSPY-PG-IPVEELFKLLK 273
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 95/203 (46%), Gaps = 6/203 (2%)
Query: 130 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNL-EPESVRFMAREIHILRRLDH 188
+ FE L +G+GT+ V ++ + A+K ++ + + + V E +L+ H
Sbjct: 148 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 207
Query: 189 INVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCH 248
+ L+ + + L V EY FSE + + Y +++ LD+ H
Sbjct: 208 PFLTALK--YSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLH 265
Query: 249 S-RGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGA 307
S + V++RD+K NL++D +G +KI DFGL D + + T Y PE+L
Sbjct: 266 SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD-GATMKTFCGTPEYLAPEVLEDN 324
Query: 308 TYYGTAVDLWSTGCILAELYAGK 330
YG AVD W G ++ E+ G+
Sbjct: 325 D-YGRAVDWWGLGVVMYEMMCGR 346
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 95/203 (46%), Gaps = 6/203 (2%)
Query: 130 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNL-EPESVRFMAREIHILRRLDH 188
+ FE L +G+GT+ V ++ + A+K ++ + + + V E +L+ H
Sbjct: 151 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 210
Query: 189 INVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCH 248
+ L+ + + L V EY FSE + + Y +++ LD+ H
Sbjct: 211 PFLTALK--YSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLH 268
Query: 249 S-RGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGA 307
S + V++RD+K NL++D +G +KI DFGL D + + T Y PE+L
Sbjct: 269 SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD-GATMKTFCGTPEYLAPEVLEDN 327
Query: 308 TYYGTAVDLWSTGCILAELYAGK 330
YG AVD W G ++ E+ G+
Sbjct: 328 D-YGRAVDWWGLGVVMYEMMCGR 349
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 90/189 (47%), Gaps = 9/189 (4%)
Query: 176 MAREIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKC 235
+ RE+ ILR++ H NVI L + +R L L LA L SE +
Sbjct: 62 IEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESL--SEEEATS 119
Query: 236 YMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGI----LKIADFGLASFYDPDQNQPLTS 291
+++Q+L G+++ H++ + H D+K N+++ + I +K+ DFGLA ++ + +
Sbjct: 120 FIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA--HEIEDGVEFKN 177
Query: 292 RVVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGS 351
T + PE ++ G D+WS G I L +G G T+ E L I +
Sbjct: 178 IFGTPEFVAPE-IVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYD 236
Query: 352 PSEDYWRKS 360
E+++ ++
Sbjct: 237 FDEEFFSQT 245
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 106/223 (47%), Gaps = 16/223 (7%)
Query: 135 LDKIGQGTYSNVYRAR-DLDQKKIV--ALKKVRFDNL-EPESVRFMAREIHILRRLDHIN 190
L+K+G G++ V R D K V A+K ++ D L +PE++ RE++ + LDH N
Sbjct: 13 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 72
Query: 191 VIKLEGLVTS---RMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHC 247
+I+L G+V + +M L + ++ L H G F + Y Q+ G+ +
Sbjct: 73 LIRLYGVVLTPPMKMVTELAPLGSLLDR----LRKHQG-HFLLGTLSRYAVQVAEGMGYL 127
Query: 248 HSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTS--RVVTLWYRPPELLL 305
S+ +HRD+ NLL+ ++KI DFGL + + + R V + PE L
Sbjct: 128 ESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLK 187
Query: 306 GATYYGTAVDLWSTGCILAELYA-GKPIMPGRTEVEQLHKIFK 347
T + A D W G L E++ G+ G + LHKI K
Sbjct: 188 TRT-FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK 229
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 115/240 (47%), Gaps = 39/240 (16%)
Query: 138 IGQGTYSNVYRAR----DLDQKK---IVALKKVRFDNLEPESVRFMAREIHILRRL-DHI 189
+G+G + V A D D+ K VA+K ++ D E + + + E+ +++ + H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATE-KDLSDLVSEMEMMKMIGKHK 101
Query: 190 NVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASH------PGLKFS-------EAQ---- 232
N+I L G T LY++ EY L + PG+++S E Q
Sbjct: 102 NIINLLGACTQ--DGPLYVIVEYASK--GNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 233 --VKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLA-SFYDPDQNQPL 289
V C QL G+++ S+ +HRD+ N+L+ N +++IADFGLA + D +
Sbjct: 158 DLVSC-TYQLARGMEYLASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKT 216
Query: 290 TSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYA--GKPIMPGRTEVEQLHKIFK 347
T+ + + + PE L Y + D+WS G ++ E++ G P PG VE+L K+ K
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQS-DVWSFGVLMWEIFTLGGSPY-PG-IPVEELFKLLK 273
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 88/186 (47%), Gaps = 9/186 (4%)
Query: 176 MAREIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKC 235
+ RE+ ILR++ H NVI L + +R L L LA L SE +
Sbjct: 62 IEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESL--SEEEATS 119
Query: 236 YMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGI----LKIADFGLASFYDPDQNQPLTS 291
+++Q+L G+++ H++ + H D+K N+++ + I +K+ DFGLA ++ + +
Sbjct: 120 FIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA--HEIEDGVEFKN 177
Query: 292 RVVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGS 351
T + PE ++ G D+WS G I L +G G T+ E L I +
Sbjct: 178 IFGTPEFVAPE-IVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYD 236
Query: 352 PSEDYW 357
E+++
Sbjct: 237 FDEEFF 242
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 108/261 (41%), Gaps = 49/261 (18%)
Query: 138 IGQGTYSNVYRARDLDQKKIVALK---KVRFDNLEPESVRFMAREIHILRRLDHINVIKL 194
IGQG+Y V A + + I A+K K + + P+ V + E+ ++++L H N+ +L
Sbjct: 34 IGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARL 93
Query: 195 EGLVTSRMSCSLYLVFEYMEHDLAGL--------------------------------AS 222
+ L + + H L L S
Sbjct: 94 YEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGS 153
Query: 223 HPGLKFS------EAQVKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGI--LKIAD 274
G + S E + M+Q+ L + H++G+ HRDIK N L N +K+ D
Sbjct: 154 IHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVD 213
Query: 275 FGLA-SFYDPDQNQ--PLTSRVVTLWYRPPELLLGAT-YYGTAVDLWSTGCILAELYAGK 330
FGL+ FY + + +T++ T ++ PE+L YG D WS G +L L G
Sbjct: 214 FGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGA 273
Query: 331 PIMPGRTEVEQLHKIF--KLC 349
PG + + + ++ KLC
Sbjct: 274 VPFPGVNDADTISQVLNKKLC 294
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 90/189 (47%), Gaps = 9/189 (4%)
Query: 176 MAREIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKC 235
+ RE+ ILR++ H NVI L + +R L L LA L SE +
Sbjct: 62 IEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESL--SEEEATS 119
Query: 236 YMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGI----LKIADFGLASFYDPDQNQPLTS 291
+++Q+L G+++ H++ + H D+K N+++ + I +K+ DFGLA ++ + +
Sbjct: 120 FIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA--HEIEDGVEFKN 177
Query: 292 RVVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGS 351
T + PE ++ G D+WS G I L +G G T+ E L I +
Sbjct: 178 IFGTPEFVAPE-IVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYD 236
Query: 352 PSEDYWRKS 360
E+++ ++
Sbjct: 237 FDEEFFSQT 245
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 107/239 (44%), Gaps = 13/239 (5%)
Query: 130 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPE----SVRFMAREIHILRR 185
D +E +++G G ++ V + R K A K ++ L S + RE++ILR
Sbjct: 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILRE 64
Query: 186 LDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLD 245
+ H N+I L + ++ L L LA L +E + +++Q+L G+
Sbjct: 65 IRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESL--TEDEATQFLKQILDGVH 122
Query: 246 HCHSRGVLHRDIKGSNLLIDNNGI----LKIADFGLASFYDPDQNQPLTSRVVTLWYRPP 301
+ HS+ + H D+K N+++ + + +K+ DFG+A + + + T + P
Sbjct: 123 YLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA--HKIEAGNEFKNIFGTPEFVAP 180
Query: 302 ELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKS 360
E ++ G D+WS G I L +G G T+ E L I + E+Y+ +
Sbjct: 181 E-IVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNT 238
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 88/186 (47%), Gaps = 9/186 (4%)
Query: 176 MAREIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKC 235
+ RE+ ILR++ H NVI L + +R L L LA L SE +
Sbjct: 62 IEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESL--SEEEATS 119
Query: 236 YMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGI----LKIADFGLASFYDPDQNQPLTS 291
+++Q+L G+++ H++ + H D+K N+++ + I +K+ DFGLA ++ + +
Sbjct: 120 FIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA--HEIEDGVEFKN 177
Query: 292 RVVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGS 351
T + PE ++ G D+WS G I L +G G T+ E L I +
Sbjct: 178 IFGTPEFVAPE-IVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYD 236
Query: 352 PSEDYW 357
E+++
Sbjct: 237 FDEEFF 242
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 107/239 (44%), Gaps = 13/239 (5%)
Query: 130 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPE----SVRFMAREIHILRR 185
D +E +++G G ++ V + R K A K ++ L S + RE++ILR
Sbjct: 12 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILRE 71
Query: 186 LDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLD 245
+ H N+I L + ++ L L LA L +E + +++Q+L G+
Sbjct: 72 IRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESL--TEDEATQFLKQILDGVH 129
Query: 246 HCHSRGVLHRDIKGSNLLIDNNGI----LKIADFGLASFYDPDQNQPLTSRVVTLWYRPP 301
+ HS+ + H D+K N+++ + + +K+ DFG+A + + + T + P
Sbjct: 130 YLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA--HKIEAGNEFKNIFGTPEFVAP 187
Query: 302 ELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKS 360
E ++ G D+WS G I L +G G T+ E L I + E+Y+ +
Sbjct: 188 E-IVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNT 245
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 107/239 (44%), Gaps = 13/239 (5%)
Query: 130 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPE----SVRFMAREIHILRR 185
D +E +++G G ++ V + R K A K ++ L S + RE++ILR
Sbjct: 26 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILRE 85
Query: 186 LDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLD 245
+ H N+I L + ++ L L LA L +E + +++Q+L G+
Sbjct: 86 IRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESL--TEDEATQFLKQILDGVH 143
Query: 246 HCHSRGVLHRDIKGSNLLIDNNGI----LKIADFGLASFYDPDQNQPLTSRVVTLWYRPP 301
+ HS+ + H D+K N+++ + + +K+ DFG+A + + + T + P
Sbjct: 144 YLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA--HKIEAGNEFKNIFGTPEFVAP 201
Query: 302 ELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKS 360
E ++ G D+WS G I L +G G T+ E L I + E+Y+ +
Sbjct: 202 E-IVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNT 259
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 84/338 (24%), Positives = 139/338 (41%), Gaps = 70/338 (20%)
Query: 132 FEKLDKIGQGTYSNVYRARDLDQK---KIVALKKVRFDNLEPESVRFMAREIHILRRLDH 188
+E +D +G+G + V +D K + VA+K V+ + E+ R EI +L +H
Sbjct: 16 YEIVDTLGEGAFGKVVEC--IDHKAGGRHVAVKIVKNVDRYCEAAR---SEIQVL---EH 67
Query: 189 INVIKLEGLVTSRMSCSLYLVFEYMEH--------DLAGLASHPGLK------FSEAQVK 234
+N S C L E+ EH +L GL+++ +K F ++
Sbjct: 68 LNTTD----PNSTFRCVQML--EWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIR 121
Query: 235 CYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDN-------------------NGILKIADF 275
Q+ ++ HS + H D+K N+L N +K+ DF
Sbjct: 122 KMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDF 181
Query: 276 GLASFYDPDQNQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYAGKPIMPG 335
G A+ YD + + L S T YR PE++L A + D+WS GCIL E Y G + P
Sbjct: 182 GSAT-YDDEHHSTLVS---TRHYRAPEVIL-ALGWSQPCDVWSIGCILIEYYLGFTVFPT 236
Query: 336 RTEVEQLHKIFKLCGSPSEDYWRKSK----LPHATI-FKPQQPYKRCVAETFKDFPAPAL 390
E L + ++ G + +K++ H + + R V+ K L
Sbjct: 237 HDSKEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFML 296
Query: 391 A----------LMETLLSIDPADRGSAASALRSEFFTM 418
+ L++ +L DPA R + AL+ FF +
Sbjct: 297 SQDVEHERLFDLIQKMLEYDPAKRITLREALKHPFFDL 334
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 98/210 (46%), Gaps = 11/210 (5%)
Query: 128 RADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLD 187
+ D FEK+ ++G G V++ ++A K + + ++P + RE+ +L +
Sbjct: 66 KDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLE-IKPAIRNQIIRELQVLHECN 124
Query: 188 HINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHC 247
++ G S S+ + E+M+ + E + ++ GL +
Sbjct: 125 SPYIVGFYGAFYSDGEISICM--EHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYL 182
Query: 248 HSR-GVLHRDIKGSNLLIDNNGILKIADFGLAS-FYDPDQNQPLTSRVVTLWYRPPELLL 305
+ ++HRD+K SN+L+++ G +K+ DFG++ D N S V T Y PE L
Sbjct: 183 REKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN----SFVGTRSYMSPERLQ 238
Query: 306 GATYYGTAVDLWSTGCILAELYAGK-PIMP 334
G T+Y D+WS G L E+ G+ PI P
Sbjct: 239 G-THYSVQSDIWSMGLSLVEMAVGRYPIPP 267
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 114/238 (47%), Gaps = 35/238 (14%)
Query: 138 IGQGTYSNVYRAR--DLDQKK-----IVALKKVRFDNLEPESVRFMAREIHILRRL-DHI 189
+G+G + V A LD+ K VA+K ++ D E + ++ E+ +++ + H
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLIS-EMEMMKMIGKHK 86
Query: 190 NVIKLEGLVTSRMSCSLYLVFEYME----HDLAGLASHPGLKFS-------EAQ------ 232
N+I L G T LY++ EY + PGL++S E Q
Sbjct: 87 NIINLLGACTQ--DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 144
Query: 233 VKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLA-SFYDPDQNQPLTS 291
V C Q+ G+++ S+ +HRD+ N+L+ + ++KIADFGLA + D + T+
Sbjct: 145 VSC-AYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 203
Query: 292 RVVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYA--GKPIMPGRTEVEQLHKIFK 347
+ + + PE L Y + D+WS G +L E++ G P PG VE+L K+ K
Sbjct: 204 GRLPVKWMAPEALFDRIYTHQS-DVWSFGVLLWEIFTLGGSP-YPG-VPVEELFKLLK 258
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 114/238 (47%), Gaps = 35/238 (14%)
Query: 138 IGQGTYSNVYRAR--DLDQKK-----IVALKKVRFDNLEPESVRFMAREIHILRRL-DHI 189
+G+G + V A LD+ K VA+K ++ D E + ++ E+ +++ + H
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLIS-EMEMMKMIGKHK 94
Query: 190 NVIKLEGLVTSRMSCSLYLVFEYME----HDLAGLASHPGLKFS-------EAQ------ 232
N+I L G T LY++ EY + PGL++S E Q
Sbjct: 95 NIINLLGACTQ--DGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDL 152
Query: 233 VKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLA-SFYDPDQNQPLTS 291
V C Q+ G+++ S+ +HRD+ N+L+ + ++KIADFGLA + D + T+
Sbjct: 153 VSC-AYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 211
Query: 292 RVVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYA--GKPIMPGRTEVEQLHKIFK 347
+ + + PE L Y + D+WS G +L E++ G P PG VE+L K+ K
Sbjct: 212 GRLPVKWMAPEALFDRIYTHQS-DVWSFGVLLWEIFTLGGSPY-PG-VPVEELFKLLK 266
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 88/186 (47%), Gaps = 9/186 (4%)
Query: 176 MAREIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKC 235
+ RE+ ILR++ H NVI L + +R L L LA L SE +
Sbjct: 62 IEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESL--SEEEATS 119
Query: 236 YMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGI----LKIADFGLASFYDPDQNQPLTS 291
+++Q+L G+++ H++ + H D+K N+++ + I +K+ DFGLA ++ + +
Sbjct: 120 FIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA--HEIEDGVEFKN 177
Query: 292 RVVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGS 351
T + PE ++ G D+WS G I L +G G T+ E L I +
Sbjct: 178 IFGTPEFVAPE-IVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYD 236
Query: 352 PSEDYW 357
E+++
Sbjct: 237 FDEEFF 242
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 63/116 (54%), Gaps = 4/116 (3%)
Query: 223 HPGLKFSEAQVKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYD 282
+PG F E + Y Q++ GL+H H R +++RD+K N+L+D++G ++I+D GLA
Sbjct: 283 NPG--FQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELK 340
Query: 283 PDQNQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTE 338
Q + T + PELLLG Y +VD ++ G L E+ A + R E
Sbjct: 341 AGQTKT-KGYAGTPGFMAPELLLGEE-YDFSVDYFALGVTLYEMIAARGPFRARGE 394
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 99/196 (50%), Gaps = 10/196 (5%)
Query: 135 LDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINVIKL 194
L ++G G + V + Q VA+K ++ ++ + E ++ L H +++L
Sbjct: 29 LKELGTGQFGVVKYGKWRGQYD-VAIKMIKEGSMSEDE---FIEEAKVMMNLSHEKLVQL 84
Query: 195 EGLVTSRMSCSLYLVFEYMEHD-LAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVL 253
G+ T + ++++ EYM + L +F Q+ + + +++ S+ L
Sbjct: 85 YGVCTKQRP--IFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFL 142
Query: 254 HRDIKGSNLLIDNNGILKIADFGLASF-YDPDQNQPLTSRVVTLWYRPPELLLGATYYGT 312
HRD+ N L+++ G++K++DFGL+ + D + + S+ W PPE+L+ + + +
Sbjct: 143 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRW-SPPEVLMYSK-FSS 200
Query: 313 AVDLWSTGCILAELYA 328
D+W+ G ++ E+Y+
Sbjct: 201 KSDIWAFGVLMWEIYS 216
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 90/189 (47%), Gaps = 9/189 (4%)
Query: 176 MAREIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKC 235
+ RE+ ILR++ H N+I L + +R L L LA L SE +
Sbjct: 62 IEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESL--SEEEATS 119
Query: 236 YMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGI----LKIADFGLASFYDPDQNQPLTS 291
+++Q+L G+++ H++ + H D+K N+++ + I +K+ DFGLA ++ + +
Sbjct: 120 FIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA--HEIEDGVEFKN 177
Query: 292 RVVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGS 351
T + PE ++ G D+WS G I L +G G T+ E L I +
Sbjct: 178 IFGTPEFVAPE-IVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYD 236
Query: 352 PSEDYWRKS 360
E+++ ++
Sbjct: 237 FDEEFFSQT 245
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 106/229 (46%), Gaps = 16/229 (6%)
Query: 130 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHI 189
D FE++ ++G G V + + I+A K + + ++P + RE+ +L +
Sbjct: 16 DDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLE-IKPAIRNQIIRELQVLHECNSP 74
Query: 190 NVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHS 249
++ G S S+ + E+M+ + E + +L GL +
Sbjct: 75 YIVGFYGAFYSDGEISICM--EHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLRE 132
Query: 250 R-GVLHRDIKGSNLLIDNNGILKIADFGLAS-FYDPDQNQPLTSRVVTLWYRPPELLLGA 307
+ ++HRD+K SN+L+++ G +K+ DFG++ D N S V T Y PE L G
Sbjct: 133 KHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN----SFVGTRSYMAPERLQG- 187
Query: 308 TYYGTAVDLWSTGCILAELYAGK-PIMPGRTEVEQLHKIFKLCGSPSED 355
T+Y D+WS G L EL G+ PI P + ++L IF G P D
Sbjct: 188 THYSVQSDIWSMGLSLVELAVGRYPIPP--PDAKELEAIF---GRPVVD 231
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 63/116 (54%), Gaps = 4/116 (3%)
Query: 223 HPGLKFSEAQVKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYD 282
+PG F E + Y Q++ GL+H H R +++RD+K N+L+D++G ++I+D GLA
Sbjct: 283 NPG--FQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELK 340
Query: 283 PDQNQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTE 338
Q + T + PELLLG Y +VD ++ G L E+ A + R E
Sbjct: 341 AGQTKT-KGYAGTPGFMAPELLLGEE-YDFSVDYFALGVTLYEMIAARGPFRARGE 394
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 63/116 (54%), Gaps = 4/116 (3%)
Query: 223 HPGLKFSEAQVKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYD 282
+PG F E + Y Q++ GL+H H R +++RD+K N+L+D++G ++I+D GLA
Sbjct: 283 NPG--FQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELK 340
Query: 283 PDQNQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTE 338
Q + T + PELLLG Y +VD ++ G L E+ A + R E
Sbjct: 341 AGQTKT-KGYAGTPGFMAPELLLGEE-YDFSVDYFALGVTLYEMIAARGPFRARGE 394
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 114/238 (47%), Gaps = 35/238 (14%)
Query: 138 IGQGTYSNVYRAR--DLDQKK-----IVALKKVRFDNLEPESVRFMAREIHILRRL-DHI 189
+G+G + V A LD+ K VA+K ++ D E + ++ E+ +++ + H
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLIS-EMEMMKMIGKHK 94
Query: 190 NVIKLEGLVTSRMSCSLYLVFEYME----HDLAGLASHPGLKFS-------EAQ------ 232
N+I L G T LY++ EY + PGL++S E Q
Sbjct: 95 NIINLLGACTQ--DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 152
Query: 233 VKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLA-SFYDPDQNQPLTS 291
V C Q+ G+++ S+ +HRD+ N+L+ + ++KIADFGLA + D + T+
Sbjct: 153 VSC-AYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 211
Query: 292 RVVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYA--GKPIMPGRTEVEQLHKIFK 347
+ + + PE L Y + D+WS G +L E++ G P PG VE+L K+ K
Sbjct: 212 GRLPVKWMAPEALFDRIYTHQS-DVWSFGVLLWEIFTLGGSPY-PG-VPVEELFKLLK 266
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 114/238 (47%), Gaps = 35/238 (14%)
Query: 138 IGQGTYSNVYRAR--DLDQKK-----IVALKKVRFDNLEPESVRFMAREIHILRRL-DHI 189
+G+G + V A LD+ K VA+K ++ D E + ++ E+ +++ + H
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLIS-EMEMMKMIGKHK 83
Query: 190 NVIKLEGLVTSRMSCSLYLVFEYME----HDLAGLASHPGLKFS-------EAQ------ 232
N+I L G T LY++ EY + PGL++S E Q
Sbjct: 84 NIINLLGACTQ--DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 141
Query: 233 VKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLA-SFYDPDQNQPLTS 291
V C Q+ G+++ S+ +HRD+ N+L+ + ++KIADFGLA + D + T+
Sbjct: 142 VSC-AYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 200
Query: 292 RVVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYA--GKPIMPGRTEVEQLHKIFK 347
+ + + PE L Y + D+WS G +L E++ G P PG VE+L K+ K
Sbjct: 201 GRLPVKWMAPEALFDRIYTHQS-DVWSFGVLLWEIFTLGGSP-YPG-VPVEELFKLLK 255
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 114/240 (47%), Gaps = 39/240 (16%)
Query: 138 IGQGTYSNVYRAR----DLDQKK---IVALKKVRFDNLEPESVRFMAREIHILRRL-DHI 189
+G+G + V A D D+ K VA+K ++ D E + + + E+ +++ + H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATE-KDLSDLVSEMEMMKMIGKHK 101
Query: 190 NVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASH------PGLKFS-------EAQ---- 232
N+I L G T LY++ Y L + PG+++S E Q
Sbjct: 102 NIINLLGACTQ--DGPLYVIVAYASK--GNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 233 --VKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLA-SFYDPDQNQPL 289
V C QL G+++ S+ +HRD+ N+L+ N ++KIADFGLA + D +
Sbjct: 158 DLVSC-TYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 216
Query: 290 TSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYA--GKPIMPGRTEVEQLHKIFK 347
T+ + + + PE L Y + D+WS G ++ E++ G P PG VE+L K+ K
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQS-DVWSFGVLMWEIFTLGGSPY-PG-IPVEELFKLLK 273
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 114/238 (47%), Gaps = 35/238 (14%)
Query: 138 IGQGTYSNVYRAR--DLDQKK-----IVALKKVRFDNLEPESVRFMAREIHILRRL-DHI 189
+G+G + V A LD+ K VA+K ++ D E + ++ E+ +++ + H
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLIS-EMEMMKMIGKHK 87
Query: 190 NVIKLEGLVTSRMSCSLYLVFEYME----HDLAGLASHPGLKFS-------EAQ------ 232
N+I L G T LY++ EY + PGL++S E Q
Sbjct: 88 NIINLLGACTQ--DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 145
Query: 233 VKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLA-SFYDPDQNQPLTS 291
V C Q+ G+++ S+ +HRD+ N+L+ + ++KIADFGLA + D + T+
Sbjct: 146 VSC-AYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 204
Query: 292 RVVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYA--GKPIMPGRTEVEQLHKIFK 347
+ + + PE L Y + D+WS G +L E++ G P PG VE+L K+ K
Sbjct: 205 GRLPVKWMAPEALFDRIYTHQS-DVWSFGVLLWEIFTLGGSP-YPG-VPVEELFKLLK 259
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 91/377 (24%), Positives = 152/377 (40%), Gaps = 110/377 (29%)
Query: 132 FEKLDKIGQGTYSNVYRARDLDQKKIVALKKVR----FDNLEPESVRFMA---------- 177
+ + K+G G +S V+ + D+ KK VA+K V+ + + +R +
Sbjct: 39 YHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDP 98
Query: 178 -REIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGL---ASHPGLKFSEAQV 233
RE+ +++ LD + + G + +VFE + H L +++ GL V
Sbjct: 99 NREM-VVQLLDDFKISGVNG-------THICMVFEVLGHHLLKWIIKSNYQGLPL--PCV 148
Query: 234 KCYMQQLLCGLDHCHSRG-VLHRDIKGSNLLIDNNG--ILKIA----------------- 273
K +QQ+L GLD+ H++ ++H DIK N+L+ N I ++A
Sbjct: 149 KKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGS 208
Query: 274 ----------DFGLASFYDPDQNQPLTSRVVTL----W-------------YRPPELLLG 306
+F L + +P + L ++ L W YR E+L+G
Sbjct: 209 AVSTAPATAGNF-LVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIG 267
Query: 307 ATYYGTAVDLWSTGCILAELYAGKPIM-PGRTE------------VEQLHKI---FKLCG 350
+ Y T D+WST C+ EL G + P E +E L K+ + G
Sbjct: 268 SG-YNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAG 326
Query: 351 SPSEDYW-RKSKLPHATIFKPQQPYKRCV---------AETFKDFPAPALALMETLLSID 400
S++++ +K L H T KP ++ V A F DF P L L+
Sbjct: 327 KYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELI------- 379
Query: 401 PADRGSAASALRSEFFT 417
P R +AA LR +
Sbjct: 380 PEKRATAAECLRHPWLN 396
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 94/203 (46%), Gaps = 6/203 (2%)
Query: 130 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNL-EPESVRFMAREIHILRRLDH 188
+ FE L +G+GT+ V ++ + A+K ++ + + + V E +L+ H
Sbjct: 10 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 69
Query: 189 INVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCH 248
+ L+ + + L V EY FSE + + Y +++ LD+ H
Sbjct: 70 PFLTALK--YSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLH 127
Query: 249 S-RGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGA 307
S + V++RD+K NL++D +G +KI DFGL D + T Y PE+L
Sbjct: 128 SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD-GATMKXFCGTPEYLAPEVLEDN 186
Query: 308 TYYGTAVDLWSTGCILAELYAGK 330
YG AVD W G ++ E+ G+
Sbjct: 187 D-YGRAVDWWGLGVVMYEMMCGR 208
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 63/116 (54%), Gaps = 4/116 (3%)
Query: 223 HPGLKFSEAQVKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYD 282
+PG F E + Y Q++ GL+H H R +++RD+K N+L+D++G ++I+D GLA
Sbjct: 283 NPG--FQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELK 340
Query: 283 PDQNQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTE 338
Q + T + PELLLG Y +VD ++ G L E+ A + R E
Sbjct: 341 AGQTKT-KGYAGTPGFMAPELLLGEE-YDFSVDYFALGVTLYEMIAARGPFRARGE 394
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 94/203 (46%), Gaps = 6/203 (2%)
Query: 130 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNL-EPESVRFMAREIHILRRLDH 188
+ FE L +G+GT+ V ++ + A+K ++ + + + V E +L+ H
Sbjct: 9 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 68
Query: 189 INVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCH 248
+ L+ + + L V EY FSE + + Y +++ LD+ H
Sbjct: 69 PFLTALK--YSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLH 126
Query: 249 S-RGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGA 307
S + V++RD+K NL++D +G +KI DFGL D + T Y PE+L
Sbjct: 127 SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD-GATMKXFCGTPEYLAPEVLEDN 185
Query: 308 TYYGTAVDLWSTGCILAELYAGK 330
YG AVD W G ++ E+ G+
Sbjct: 186 D-YGRAVDWWGLGVVMYEMMCGR 207
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 94/203 (46%), Gaps = 6/203 (2%)
Query: 130 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNL-EPESVRFMAREIHILRRLDH 188
+ FE L +G+GT+ V ++ + A+K ++ + + + V E +L+ H
Sbjct: 8 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 67
Query: 189 INVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCH 248
+ L+ + + L V EY FSE + + Y +++ LD+ H
Sbjct: 68 PFLTALK--YSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLH 125
Query: 249 S-RGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGA 307
S + V++RD+K NL++D +G +KI DFGL D + T Y PE+L
Sbjct: 126 SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD-GATMKXFCGTPEYLAPEVLEDN 184
Query: 308 TYYGTAVDLWSTGCILAELYAGK 330
YG AVD W G ++ E+ G+
Sbjct: 185 D-YGRAVDWWGLGVVMYEMMCGR 206
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 114/240 (47%), Gaps = 39/240 (16%)
Query: 138 IGQGTYSNVYRAR----DLDQKK---IVALKKVRFDNLEPESVRFMAREIHILRRL-DHI 189
+G+G + V A D D+ K VA+K ++ D E + + + E+ +++ + H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATE-KDLSDLVSEMEMMKMIGKHK 101
Query: 190 NVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASH------PGLKFS-------EAQ---- 232
N+I L G T LY++ Y L + PG+++S E Q
Sbjct: 102 NIINLLGACTQ--DGPLYVIVGYASK--GNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 233 --VKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLA-SFYDPDQNQPL 289
V C QL G+++ S+ +HRD+ N+L+ N ++KIADFGLA + D +
Sbjct: 158 DLVSC-TYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 216
Query: 290 TSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYA--GKPIMPGRTEVEQLHKIFK 347
T+ + + + PE L Y + D+WS G ++ E++ G P PG VE+L K+ K
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQS-DVWSFGVLMWEIFTLGGSPY-PG-IPVEELFKLLK 273
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 99/196 (50%), Gaps = 10/196 (5%)
Query: 135 LDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINVIKL 194
L ++G G + V + Q VA+K ++ ++ + E ++ L H +++L
Sbjct: 13 LKELGTGQFGVVKYGKWRGQYD-VAIKMIKEGSMSEDE---FIEEAKVMMNLSHEKLVQL 68
Query: 195 EGLVTSRMSCSLYLVFEYMEHD-LAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVL 253
G+ T + ++++ EYM + L +F Q+ + + +++ S+ L
Sbjct: 69 YGVCTKQRP--IFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFL 126
Query: 254 HRDIKGSNLLIDNNGILKIADFGLASF-YDPDQNQPLTSRVVTLWYRPPELLLGATYYGT 312
HRD+ N L+++ G++K++DFGL+ + D + + S+ W PPE+L+ + + +
Sbjct: 127 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRW-SPPEVLMYSK-FSS 184
Query: 313 AVDLWSTGCILAELYA 328
D+W+ G ++ E+Y+
Sbjct: 185 KSDIWAFGVLMWEIYS 200
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 87/319 (27%), Positives = 133/319 (41%), Gaps = 55/319 (17%)
Query: 129 ADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRL-D 187
D +E + IG G+YS R A+K + +P EI IL R
Sbjct: 21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDP------TEEIEILLRYGQ 74
Query: 188 HINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLK---FSEAQVKCYMQQLLCGL 244
H N+I L+ + +Y+V E M+ G L+ FSE + + + +
Sbjct: 75 HPNIITLKDVYDD--GKYVYVVTELMK---GGELLDKILRQKFFSEREASAVLFTITKTV 129
Query: 245 DHCHSRGVLHRDIKGSNLL-IDNNG---ILKIADFGLASFYDPDQNQPLTSRVVTLWYRP 300
++ H++GV+HRD+K SN+L +D +G ++I DFG A +N L + T +
Sbjct: 130 EYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRA-ENGLLMTPCYTANFVA 188
Query: 301 PELLLGATYYGTAVDLWSTGCILAELYAG-KPIM--PGRTEVEQLHKIFKLCGSPSEDYW 357
PE +L Y A D+WS G +L + G P P T E L +I S S YW
Sbjct: 189 PE-VLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYW 247
Query: 358 RKSKLPHATIFKPQQPYKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALRSEFFT 417
V++T KD L+ +L +DP R +AA LR
Sbjct: 248 NS------------------VSDTAKD-------LVSKMLHVDPHQRLTAALVLR----- 277
Query: 418 MKPLPCDPSSLPKYPPSKE 436
P LP+Y +++
Sbjct: 278 -HPWIVHWDQLPQYQLNRQ 295
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 90/319 (28%), Positives = 131/319 (41%), Gaps = 64/319 (20%)
Query: 123 GWVPR-------RADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRF 175
G VPR +D + + IG G+YS R A+K + +P
Sbjct: 13 GLVPRGSHMNLVFSDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDP----- 67
Query: 176 MAREIHILRRL-DHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLK---FSEA 231
+ EI IL R H N+I L+ + +YLV E M G L+ FSE
Sbjct: 68 -SEEIEILLRYGQHPNIITLKDVYDD--GKHVYLVTELMR---GGELLDKILRQKFFSER 121
Query: 232 QVKCYMQQLLCGLDHCHSRGVLHRDIKGSNLL-IDNNG---ILKIADFGLASFYDPDQNQ 287
+ + + +++ HS+GV+HRD+K SN+L +D +G L+I DFG A +N
Sbjct: 122 EASFVLHTIGKTVEYLHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRA-ENG 180
Query: 288 PLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYAG-KPIM--PGRTEVEQLHK 344
L + T + PE +L Y D+WS G +L + AG P P T E L +
Sbjct: 181 LLMTPCYTANFVAPE-VLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTR 239
Query: 345 I----FKLCGSPSEDYWRKSKLPHATIFKPQQPYKRCVAETFKDFPAPALALMETLLSID 400
I F L G W V+ET KD L+ +L +D
Sbjct: 240 IGSGKFTLSGGN----WNT------------------VSETAKD-------LVSKMLHVD 270
Query: 401 PADRGSAASALRSEFFTMK 419
P R +A L+ + T K
Sbjct: 271 PHQRLTAKQVLQHPWVTQK 289
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 99/196 (50%), Gaps = 10/196 (5%)
Query: 135 LDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINVIKL 194
L ++G G + V + Q VA+K ++ ++ + E ++ L H +++L
Sbjct: 20 LKELGTGQFGVVKYGKWRGQYD-VAIKMIKEGSMSEDE---FIEEAKVMMNLSHEKLVQL 75
Query: 195 EGLVTSRMSCSLYLVFEYMEHD-LAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVL 253
G+ T + ++++ EYM + L +F Q+ + + +++ S+ L
Sbjct: 76 YGVCTKQRP--IFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFL 133
Query: 254 HRDIKGSNLLIDNNGILKIADFGLASF-YDPDQNQPLTSRVVTLWYRPPELLLGATYYGT 312
HRD+ N L+++ G++K++DFGL+ + D + + S+ W PPE+L+ + + +
Sbjct: 134 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRW-SPPEVLMYSK-FSS 191
Query: 313 AVDLWSTGCILAELYA 328
D+W+ G ++ E+Y+
Sbjct: 192 KSDIWAFGVLMWEIYS 207
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 99/196 (50%), Gaps = 10/196 (5%)
Query: 135 LDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINVIKL 194
L ++G G + V + Q VA+K ++ ++ + E ++ L H +++L
Sbjct: 9 LKELGTGQFGVVKYGKWRGQYD-VAIKMIKEGSMSEDE---FIEEAKVMMNLSHEKLVQL 64
Query: 195 EGLVTSRMSCSLYLVFEYMEHD-LAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVL 253
G+ T + ++++ EYM + L +F Q+ + + +++ S+ L
Sbjct: 65 YGVCTKQRP--IFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFL 122
Query: 254 HRDIKGSNLLIDNNGILKIADFGLASF-YDPDQNQPLTSRVVTLWYRPPELLLGATYYGT 312
HRD+ N L+++ G++K++DFGL+ + D + + S+ W PPE+L+ + + +
Sbjct: 123 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRW-SPPEVLMYSK-FSS 180
Query: 313 AVDLWSTGCILAELYA 328
D+W+ G ++ E+Y+
Sbjct: 181 KSDIWAFGVLMWEIYS 196
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 115/240 (47%), Gaps = 39/240 (16%)
Query: 138 IGQGTYSNVYRAR--DLDQKK-----IVALKKVRFDNLEPESVRFMAREIHILRRL-DHI 189
+G+G + V A LD+ K VA+K ++ D E + + + E+ +++ + H
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATE-KDLSDLISEMEMMKMIGKHK 135
Query: 190 NVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASH------PGLKFS-------EAQ---- 232
N+I L G T LY++ EY L + PGL++S E Q
Sbjct: 136 NIINLLGACTQ--DGPLYVIVEYASK--GNLREYLQARRPPGLEYSYNPSHNPEEQLSSK 191
Query: 233 --VKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLA-SFYDPDQNQPL 289
V C Q+ G+++ S+ +HRD+ N+L+ + ++KIADFGLA + D +
Sbjct: 192 DLVSC-AYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 250
Query: 290 TSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYA--GKPIMPGRTEVEQLHKIFK 347
T+ + + + PE L Y + D+WS G +L E++ G P PG VE+L K+ K
Sbjct: 251 TNGRLPVKWMAPEALFDRIYTHQS-DVWSFGVLLWEIFTLGGSPY-PG-VPVEELFKLLK 307
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 91/376 (24%), Positives = 152/376 (40%), Gaps = 110/376 (29%)
Query: 132 FEKLDKIGQGTYSNVYRARDLDQKKIVALKKVR----FDNLEPESVRFMA---------- 177
+ + K+G G +S V+ + D+ KK VA+K V+ + + +R +
Sbjct: 23 YHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDP 82
Query: 178 -REIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGL---ASHPGLKFSEAQV 233
RE+ +++ LD + + G + +VFE + H L +++ GL V
Sbjct: 83 NREM-VVQLLDDFKISGVNG-------THICMVFEVLGHHLLKWIIKSNYQGLPLP--CV 132
Query: 234 KCYMQQLLCGLDHCHSRG-VLHRDIKGSNLLIDNNG--ILKIA----------------- 273
K +QQ+L GLD+ H++ ++H DIK N+L+ N I ++A
Sbjct: 133 KKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGS 192
Query: 274 ----------DFGLASFYDPDQNQPLTSRVVTL----W-------------YRPPELLLG 306
+F L + +P + L ++ L W YR E+L+G
Sbjct: 193 AVSTAPATAGNF-LVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIG 251
Query: 307 ATYYGTAVDLWSTGCILAELYAGKPIM-PGRTE------------VEQLHKI---FKLCG 350
+ Y T D+WST C+ EL G + P E +E L K+ + G
Sbjct: 252 SG-YNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAG 310
Query: 351 SPSEDYW-RKSKLPHATIFKPQQPYKRCV---------AETFKDFPAPALALMETLLSID 400
S++++ +K L H T KP ++ V A F DF P L L+
Sbjct: 311 KYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELI------- 363
Query: 401 PADRGSAASALRSEFF 416
P R +AA LR +
Sbjct: 364 PEKRATAAECLRHPWL 379
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 113/238 (47%), Gaps = 35/238 (14%)
Query: 138 IGQGTYSNVYRAR--DLDQKK-----IVALKKVRFDNLEPESVRFMAREIHILRRL-DHI 189
+G+G + V A LD+ K VA+K ++ D E + ++ E+ +++ + H
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLIS-EMEMMKMIGKHK 79
Query: 190 NVIKLEGLVTSRMSCSLYLVFEYME----HDLAGLASHPGLKF-------------SEAQ 232
N+I L G T LY++ EY + PGL++ S+
Sbjct: 80 NIINLLGACTQ--DGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDL 137
Query: 233 VKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLA-SFYDPDQNQPLTS 291
V C Q+ G+++ S+ +HRD+ N+L+ + ++KIADFGLA + D + T+
Sbjct: 138 VSC-AYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 196
Query: 292 RVVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYA--GKPIMPGRTEVEQLHKIFK 347
+ + + PE L Y + D+WS G +L E++ G P PG VE+L K+ K
Sbjct: 197 GRLPVKWMAPEALFDRIYTHQS-DVWSFGVLLWEIFTLGGSP-YPG-VPVEELFKLLK 251
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 99/196 (50%), Gaps = 10/196 (5%)
Query: 135 LDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINVIKL 194
L ++G G + V + Q VA+K ++ ++ + E ++ L H +++L
Sbjct: 14 LKELGTGQFGVVKYGKWRGQYD-VAIKMIKEGSMSEDE---FIEEAKVMMNLSHEKLVQL 69
Query: 195 EGLVTSRMSCSLYLVFEYMEHD-LAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVL 253
G+ T + ++++ EYM + L +F Q+ + + +++ S+ L
Sbjct: 70 YGVCTKQRP--IFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFL 127
Query: 254 HRDIKGSNLLIDNNGILKIADFGLASF-YDPDQNQPLTSRVVTLWYRPPELLLGATYYGT 312
HRD+ N L+++ G++K++DFGL+ + D + + S+ W PPE+L+ + + +
Sbjct: 128 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRW-SPPEVLMYSK-FSS 185
Query: 313 AVDLWSTGCILAELYA 328
D+W+ G ++ E+Y+
Sbjct: 186 KSDIWAFGVLMWEIYS 201
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 114/240 (47%), Gaps = 39/240 (16%)
Query: 138 IGQGTYSNVYRAR--DLDQKK-----IVALKKVRFDNLEPESVRFMAREIHILRRL-DHI 189
+G+G + V A LD+ K VA+K ++ D E + ++ E+ +++ + H
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLIS-EMEMMKMIGKHK 94
Query: 190 NVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASH------PGLKF-------------SE 230
N+I L G T LY++ EY L + PGL++ S+
Sbjct: 95 NIINLLGACTQ--DGPLYVIVEYASK--GNLREYLQARRPPGLEYCYNPSHNPEEQLSSK 150
Query: 231 AQVKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLA-SFYDPDQNQPL 289
V C Q+ G+++ S+ +HRD+ N+L+ + ++KIADFGLA + D +
Sbjct: 151 DLVSC-AYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 209
Query: 290 TSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYA--GKPIMPGRTEVEQLHKIFK 347
T+ + + + PE L Y + D+WS G +L E++ G P PG VE+L K+ K
Sbjct: 210 TNGRLPVKWMAPEALFDRIYTHQS-DVWSFGVLLWEIFTLGGSPY-PG-VPVEELFKLLK 266
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 75/148 (50%), Gaps = 9/148 (6%)
Query: 136 DKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINVIKLE 195
+KIG G++ V+RA VA+K + + E V RE+ I++RL H N++
Sbjct: 43 EKIGAGSFGTVHRAEW--HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFM 100
Query: 196 GLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLK--FSEAQVKCYMQQLLCGLDHCHSRG- 251
G VT +L +V EY+ L L G + E + + G+++ H+R
Sbjct: 101 GAVTQ--PPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNP 158
Query: 252 -VLHRDIKGSNLLIDNNGILKIADFGLA 278
++HRD+K NLL+D +K+ DFGL+
Sbjct: 159 PIVHRDLKSPNLLVDKKYTVKVCDFGLS 186
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 98/210 (46%), Gaps = 11/210 (5%)
Query: 128 RADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLD 187
+ D FEK+ ++G G V++ ++A K + + ++P + RE+ +L +
Sbjct: 31 KDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLE-IKPAIRNQIIRELQVLHECN 89
Query: 188 HINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHC 247
++ G S S+ + E+M+ + E + ++ GL +
Sbjct: 90 SPYIVGFYGAFYSDGEISICM--EHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYL 147
Query: 248 HSR-GVLHRDIKGSNLLIDNNGILKIADFGLAS-FYDPDQNQPLTSRVVTLWYRPPELLL 305
+ ++HRD+K SN+L+++ G +K+ DFG++ D N S V T Y PE L
Sbjct: 148 REKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN----SFVGTRSYMSPERLQ 203
Query: 306 GATYYGTAVDLWSTGCILAELYAGK-PIMP 334
G T+Y D+WS G L E+ G+ PI P
Sbjct: 204 G-THYSVQSDIWSMGLSLVEMAVGRYPIPP 232
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 98/217 (45%), Gaps = 20/217 (9%)
Query: 136 DKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRF-MAREIHILRRLD-HINVIK 193
D +G+G ++ V +L + A+K + +P +R + RE+ +L + H NV++
Sbjct: 19 DVLGEGAHARVQTCINLITSQEYAVKIIE---KQPGHIRSRVFREVEMLYQCQGHRNVLE 75
Query: 194 LEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVL 253
L YLVFE M H F+E + +Q + LD H++G+
Sbjct: 76 LIEFFEEEDR--FYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIA 133
Query: 254 HRDIKGSNLLIDN-NGI--LKIADFGLASFY------DPDQNQPLTSRVVTLWYRPPELL 304
HRD+K N+L ++ N + +KI DFGL S P L + + Y PE++
Sbjct: 134 HRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVV 193
Query: 305 LG----ATYYGTAVDLWSTGCILAELYAGKPIMPGRT 337
A+ Y DLWS G IL L +G P GR
Sbjct: 194 EAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRC 230
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 98/210 (46%), Gaps = 11/210 (5%)
Query: 128 RADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLD 187
+ D FEK+ ++G G V++ ++A K + + ++P + RE+ +L +
Sbjct: 4 KDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLE-IKPAIRNQIIRELQVLHECN 62
Query: 188 HINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHC 247
++ G S S+ + E+M+ + E + ++ GL +
Sbjct: 63 SPYIVGFYGAFYSDGEISICM--EHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYL 120
Query: 248 HSR-GVLHRDIKGSNLLIDNNGILKIADFGLAS-FYDPDQNQPLTSRVVTLWYRPPELLL 305
+ ++HRD+K SN+L+++ G +K+ DFG++ D N S V T Y PE L
Sbjct: 121 REKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN----SFVGTRSYMSPERLQ 176
Query: 306 GATYYGTAVDLWSTGCILAELYAGK-PIMP 334
G T+Y D+WS G L E+ G+ PI P
Sbjct: 177 G-THYSVQSDIWSMGLSLVEMAVGRYPIPP 205
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 97/195 (49%), Gaps = 8/195 (4%)
Query: 135 LDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINVIKL 194
L ++G G + V + Q VA+K ++ ++ + E ++ L H +++L
Sbjct: 14 LKELGTGQFGVVKYGKWRGQYD-VAIKMIKEGSMSEDE---FIEEAKVMMNLSHEKLVQL 69
Query: 195 EGLVTSRMSCSLYLVFEYMEHD-LAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVL 253
G+ T + ++++ EYM + L +F Q+ + + +++ S+ L
Sbjct: 70 YGVCTKQRP--IFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFL 127
Query: 254 HRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGATYYGTA 313
HRD+ N L+++ G++K++DFGL+ + D+ + + PPE+L+ + + +
Sbjct: 128 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSPPEVLMYSK-FSSK 186
Query: 314 VDLWSTGCILAELYA 328
D+W+ G ++ E+Y+
Sbjct: 187 SDIWAFGVLMWEIYS 201
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 110/238 (46%), Gaps = 37/238 (15%)
Query: 129 ADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDH 188
A + + +IG+G Y V+ + +K V KV F E+ F EI+ + H
Sbjct: 36 AKQIQMVKQIGKGRYGEVWMGKWRGEKVAV---KVFFTT--EEASWFRETEIYQTVLMRH 90
Query: 189 INVIKLEGLVTSRMSCS-----LYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQL--- 240
N++ G + + + + LYL+ +Y E+ + + LK + K ++
Sbjct: 91 ENIL---GFIAADIKGTGSWTQLYLITDYHENG----SLYDYLKSTTLDAKSMLKLAYSS 143
Query: 241 LCGLDHCHSR--------GVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQ---PL 289
+ GL H H+ + HRD+K N+L+ NG IAD GLA + D N+ P
Sbjct: 144 VSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPP 203
Query: 290 TSRVVTLWYRPPELL---LGATYYGTAV--DLWSTGCILAELYAGKPIMPGRTEVEQL 342
+RV T Y PPE+L L ++ + + D++S G IL E+ A + + G E QL
Sbjct: 204 NTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEV-ARRCVSGGIVEEYQL 260
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 81/338 (23%), Positives = 137/338 (40%), Gaps = 70/338 (20%)
Query: 132 FEKLDKIGQGTYSNVYRARDLDQK---KIVALKKVRFDNLEPESVRFMAREIHILRRLDH 188
+E +D +G+G + V +D K + VA+K V+ + E+ R EI +L +H
Sbjct: 16 YEIVDTLGEGAFGKVVEC--IDHKAGGRHVAVKIVKNVDRYCEAAR---SEIQVL---EH 67
Query: 189 INVIKLEGLVTSRMSCSLYLVFEYMEH--------DLAGLASHPGLK------FSEAQVK 234
+N S C L E+ EH +L GL+++ +K F ++
Sbjct: 68 LNTTD----PNSTFRCVQML--EWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIR 121
Query: 235 CYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDN-------------------NGILKIADF 275
Q+ ++ HS + H D+K N+L N +K+ DF
Sbjct: 122 KMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDF 181
Query: 276 GLASFYDPDQNQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYAGKPIMPG 335
G A++ D + + R YR PE++L A + D+WS GCIL E Y G + P
Sbjct: 182 GSATYDDEHHSTLVXXR----HYRAPEVIL-ALGWSQPCDVWSIGCILIEYYLGFTVFPT 236
Query: 336 RTEVEQLHKIFKLCGSPSEDYWRKSK----LPHATI-FKPQQPYKRCVAETFKDFPAPAL 390
E L + ++ G + +K++ H + + R V+ K L
Sbjct: 237 HDSKEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFML 296
Query: 391 A----------LMETLLSIDPADRGSAASALRSEFFTM 418
+ L++ +L DPA R + AL+ FF +
Sbjct: 297 SQDVEHERLFDLIQKMLEYDPAKRITLREALKHPFFDL 334
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 127/306 (41%), Gaps = 57/306 (18%)
Query: 129 ADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRL-D 187
+D + + IG G+YS R A+K + +P + EI IL R
Sbjct: 26 SDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDP------SEEIEILLRYGQ 79
Query: 188 HINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLK---FSEAQVKCYMQQLLCGL 244
H N+I L+ + +YLV E M G L+ FSE + + + +
Sbjct: 80 HPNIITLKDVYDD--GKHVYLVTELMR---GGELLDKILRQKFFSEREASFVLHTIGKTV 134
Query: 245 DHCHSRGVLHRDIKGSNLL-IDNNG---ILKIADFGLASFYDPDQNQPLTSRVVTLWYRP 300
++ HS+GV+HRD+K SN+L +D +G L+I DFG A +N L + T +
Sbjct: 135 EYLHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRA-ENGLLMTPCYTANFVA 193
Query: 301 PELLLGATYYGTAVDLWSTGCILAELYAG-KPIM--PGRTEVEQLHKI----FKLCGSPS 353
PE +L Y D+WS G +L + AG P P T E L +I F L G
Sbjct: 194 PE-VLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGN- 251
Query: 354 EDYWRKSKLPHATIFKPQQPYKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALRS 413
W V+ET KD L+ +L +DP R +A L+
Sbjct: 252 ---WNT------------------VSETAKD-------LVSKMLHVDPHQRLTAKQVLQH 283
Query: 414 EFFTMK 419
+ T K
Sbjct: 284 PWVTQK 289
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 98/210 (46%), Gaps = 11/210 (5%)
Query: 128 RADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLD 187
+ D FEK+ ++G G V++ ++A K + + ++P + RE+ +L +
Sbjct: 4 KDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLE-IKPAIRNQIIRELQVLHECN 62
Query: 188 HINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHC 247
++ G S S+ + E+M+ + E + ++ GL +
Sbjct: 63 SPYIVGFYGAFYSDGEISICM--EHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYL 120
Query: 248 HSR-GVLHRDIKGSNLLIDNNGILKIADFGLAS-FYDPDQNQPLTSRVVTLWYRPPELLL 305
+ ++HRD+K SN+L+++ G +K+ DFG++ D N S V T Y PE L
Sbjct: 121 REKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN----SFVGTRSYMSPERLQ 176
Query: 306 GATYYGTAVDLWSTGCILAELYAGK-PIMP 334
G T+Y D+WS G L E+ G+ PI P
Sbjct: 177 G-THYSVQSDIWSMGLSLVEMAVGRYPIPP 205
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 98/210 (46%), Gaps = 11/210 (5%)
Query: 128 RADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLD 187
+ D FEK+ ++G G V++ ++A K + + ++P + RE+ +L +
Sbjct: 4 KDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLE-IKPAIRNQIIRELQVLHECN 62
Query: 188 HINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHC 247
++ G S S+ + E+M+ + E + ++ GL +
Sbjct: 63 SPYIVGFYGAFYSDGEISICM--EHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYL 120
Query: 248 HSR-GVLHRDIKGSNLLIDNNGILKIADFGLAS-FYDPDQNQPLTSRVVTLWYRPPELLL 305
+ ++HRD+K SN+L+++ G +K+ DFG++ D N S V T Y PE L
Sbjct: 121 REKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN----SFVGTRSYMSPERLQ 176
Query: 306 GATYYGTAVDLWSTGCILAELYAGK-PIMP 334
G T+Y D+WS G L E+ G+ PI P
Sbjct: 177 G-THYSVQSDIWSMGLSLVEMAVGRYPIPP 205
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 96/207 (46%), Gaps = 22/207 (10%)
Query: 136 DKIGQGTYSNVYRA----RDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINV 191
+K G+G + VY+ + KK+ A+ + + L+ + +EI + + H N+
Sbjct: 28 NKXGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQ----FDQEIKVXAKCQHENL 83
Query: 192 IKLEGLVTSRMSCSLYLVFEY-----MEHDLAGLASHPGLKFSEAQVKCYMQQ-LLCGLD 245
++L G S L LV+ Y + L+ L P L + +C + Q G++
Sbjct: 84 VELLGF--SSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSW---HXRCKIAQGAANGIN 138
Query: 246 HCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVV-TLWYRPPELL 304
H +HRDIK +N+L+D KI+DFGLA + SR+V T Y PE L
Sbjct: 139 FLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPEAL 198
Query: 305 LGATYYGTAVDLWSTGCILAELYAGKP 331
G + D++S G +L E+ G P
Sbjct: 199 RGEITPKS--DIYSFGVVLLEIITGLP 223
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 99/211 (46%), Gaps = 32/211 (15%)
Query: 138 IGQGTYSNVYRARDLDQKKIVALKKVRFDNLE--PESVRFMAREIHILRRLDHINVIKLE 195
IG G + VYRA + + VA+K R D E +++ + +E + L H N+I L
Sbjct: 15 IGIGGFGKVYRAFWIGDE--VAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALR 72
Query: 196 GLVTSRMSCSLYLVFEY-----MEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSR 250
G+ +L LV E+ + L+G P + + A Q+ G+++ H
Sbjct: 73 GVCLKE--PNLCLVMEFARGGPLNRVLSGKRIPPDILVNWAV------QIARGMNYLHDE 124
Query: 251 GV---LHRDIKGSNLLI--------DNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYR 299
+ +HRD+K SN+LI +N ILKI DFGLA + + +++ W
Sbjct: 125 AIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREW--HRTTKMSAAGAYAWMA 182
Query: 300 PPELLLGATYYGTAVDLWSTGCILAELYAGK 330
P ++ A+ + D+WS G +L EL G+
Sbjct: 183 PE--VIRASMFSKGSDVWSYGVLLWELLTGE 211
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 75/148 (50%), Gaps = 9/148 (6%)
Query: 136 DKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINVIKLE 195
+KIG G++ V+RA VA+K + + E V RE+ I++RL H N++
Sbjct: 43 EKIGAGSFGTVHRAEW--HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFM 100
Query: 196 GLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLK--FSEAQVKCYMQQLLCGLDHCHSRG- 251
G VT +L +V EY+ L L G + E + + G+++ H+R
Sbjct: 101 GAVTQ--PPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNP 158
Query: 252 -VLHRDIKGSNLLIDNNGILKIADFGLA 278
++HR++K NLL+D +K+ DFGL+
Sbjct: 159 PIVHRNLKSPNLLVDKKYTVKVCDFGLS 186
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 93/206 (45%), Gaps = 11/206 (5%)
Query: 128 RADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLD 187
+AD E + ++G+G Y V + R + +I+A+K++R E R + +R +D
Sbjct: 5 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVD 64
Query: 188 HINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASH---PGLKFSEAQVKCYMQQLLCGL 244
+ G + +++ E M+ L G E + ++ L
Sbjct: 65 CPFTVTFYGALFRE--GDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKAL 122
Query: 245 DHCHSR-GVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPEL 303
+H HS+ V+HRD+K SN+LI+ G +K+ DFG++ + D + + + Y PE
Sbjct: 123 EHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDAGCKP--YMAPER 180
Query: 304 L---LGATYYGTAVDLWSTGCILAEL 326
+ L Y D+WS G + EL
Sbjct: 181 INPELNQKGYSVKSDIWSLGITMIEL 206
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 55/107 (51%), Gaps = 6/107 (5%)
Query: 228 FSEAQVKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDN---NGILKIADFGLASFYDPD 284
F+E + M+ + + + HS + HRD+K NLL + N ILK+ DFG A +
Sbjct: 158 FTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK--ETT 215
Query: 285 QNQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYAGKP 331
+ LT+ T +Y PE +LG Y + D+WS G I+ L G P
Sbjct: 216 SHNSLTTPCYTPYYVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYP 261
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 55/107 (51%), Gaps = 6/107 (5%)
Query: 228 FSEAQVKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDN---NGILKIADFGLASFYDPD 284
F+E + M+ + + + HS + HRD+K NLL + N ILK+ DFG A +
Sbjct: 114 FTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK--ETT 171
Query: 285 QNQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYAGKP 331
+ LT+ T +Y PE +LG Y + D+WS G I+ L G P
Sbjct: 172 SHNSLTTPCYTPYYVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYP 217
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 92/206 (44%), Gaps = 11/206 (5%)
Query: 128 RADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLD 187
+AD E + ++G+G Y V + R + +I+A+K++R E R + +R +D
Sbjct: 49 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVD 108
Query: 188 HINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASH---PGLKFSEAQVKCYMQQLLCGL 244
+ G + +++ E M+ L G E + ++ L
Sbjct: 109 CPFTVTFYGALFRE--GDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKAL 166
Query: 245 DHCHSR-GVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPEL 303
+H HS+ V+HRD+K SN+LI+ G +K+ DFG++ + + + + Y PE
Sbjct: 167 EHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTIDAGCKP--YMAPER 224
Query: 304 L---LGATYYGTAVDLWSTGCILAEL 326
+ L Y D+WS G + EL
Sbjct: 225 INPELNQKGYSVKSDIWSLGITMIEL 250
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 98/210 (46%), Gaps = 11/210 (5%)
Query: 128 RADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLD 187
+ D FEK+ ++G G V++ ++A K + + ++P + RE+ +L +
Sbjct: 4 KDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLE-IKPAIRNQIIRELQVLHECN 62
Query: 188 HINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHC 247
++ G S S+ + E+M+ + E + ++ GL +
Sbjct: 63 SPYIVGFYGAFYSDGEISICM--EHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYL 120
Query: 248 HSR-GVLHRDIKGSNLLIDNNGILKIADFGLAS-FYDPDQNQPLTSRVVTLWYRPPELLL 305
+ ++HRD+K SN+L+++ G +K+ DFG++ D N S V T Y PE L
Sbjct: 121 REKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN----SFVGTRSYMSPERLQ 176
Query: 306 GATYYGTAVDLWSTGCILAELYAGK-PIMP 334
G T+Y D+WS G L E+ G+ PI P
Sbjct: 177 G-THYSVQSDIWSMGLSLVEMAVGRYPIPP 205
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 98/210 (46%), Gaps = 11/210 (5%)
Query: 128 RADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLD 187
+ D FEK+ ++G G V++ ++A K + + ++P + RE+ +L +
Sbjct: 4 KDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLE-IKPAIRNQIIRELQVLHECN 62
Query: 188 HINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHC 247
++ G S S+ + E+M+ + E + ++ GL +
Sbjct: 63 SPYIVGFYGAFYSDGEISICM--EHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYL 120
Query: 248 HSR-GVLHRDIKGSNLLIDNNGILKIADFGLAS-FYDPDQNQPLTSRVVTLWYRPPELLL 305
+ ++HRD+K SN+L+++ G +K+ DFG++ D N S V T Y PE L
Sbjct: 121 REKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN----SFVGTRSYMSPERLQ 176
Query: 306 GATYYGTAVDLWSTGCILAELYAGK-PIMP 334
G T+Y D+WS G L E+ G+ PI P
Sbjct: 177 G-THYSVQSDIWSMGLSLVEMAVGRYPIPP 205
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 55/107 (51%), Gaps = 6/107 (5%)
Query: 228 FSEAQVKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDN---NGILKIADFGLASFYDPD 284
F+E + M+ + + + HS + HRD+K NLL + N ILK+ DFG A +
Sbjct: 164 FTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK--ETT 221
Query: 285 QNQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYAGKP 331
+ LT+ T +Y PE +LG Y + D+WS G I+ L G P
Sbjct: 222 SHNSLTTPCYTPYYVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYP 267
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 96/205 (46%), Gaps = 10/205 (4%)
Query: 128 RADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLD 187
+ D FEK+ ++G G V++ ++A K + + ++P + RE+ +L +
Sbjct: 7 KDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLE-IKPAIRNQIIRELQVLHECN 65
Query: 188 HINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHC 247
++ G S S+ + E+M+ + E + ++ GL +
Sbjct: 66 SPYIVGFYGAFYSDGEISICM--EHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYL 123
Query: 248 HSR-GVLHRDIKGSNLLIDNNGILKIADFGLAS-FYDPDQNQPLTSRVVTLWYRPPELLL 305
+ ++HRD+K SN+L+++ G +K+ DFG++ D N+ + +R Y PE L
Sbjct: 124 REKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMANEFVGTRS----YMSPERLQ 179
Query: 306 GATYYGTAVDLWSTGCILAELYAGK 330
G T+Y D+WS G L E+ G+
Sbjct: 180 G-THYSVQSDIWSMGLSLVEMAVGR 203
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 93/202 (46%), Gaps = 23/202 (11%)
Query: 137 KIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINVIKLEG 196
++G+G++ V+R +D A+KKVR + F E+ L ++ L G
Sbjct: 65 RVGRGSFGEVHRMKDKQTGFQCAVKKVRLEV-------FRVEELVACAGLSSPRIVPLYG 117
Query: 197 LVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVLHR 255
V R + + E +E L L G E + Y+ Q L GL++ H+R +LH
Sbjct: 118 AV--REGPWVNIFMELLEGGSLGQLIKQMGC-LPEDRALYYLGQALEGLEYLHTRRILHG 174
Query: 256 DIKGSNLLIDNNGI-LKIADFGLASFYDPDQNQPLTSRVVTLWYRP-------PELLLGA 307
D+K N+L+ ++G + DFG A PD L ++T Y P PE+++G
Sbjct: 175 DVKADNVLLSSDGSRAALCDFGHALCLQPDG---LGKSLLTGDYIPGTETHMAPEVVMGK 231
Query: 308 TYYGTAVDLWSTGCILAELYAG 329
VD+WS+ C++ + G
Sbjct: 232 P-CDAKVDIWSSCCMMLHMLNG 252
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 55/107 (51%), Gaps = 6/107 (5%)
Query: 228 FSEAQVKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDN---NGILKIADFGLASFYDPD 284
F+E + M+ + + + HS + HRD+K NLL + N ILK+ DFG A +
Sbjct: 119 FTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK--ETT 176
Query: 285 QNQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYAGKP 331
+ LT+ T +Y PE +LG Y + D+WS G I+ L G P
Sbjct: 177 SHNSLTTPCYTPYYVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYP 222
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 94/202 (46%), Gaps = 23/202 (11%)
Query: 137 KIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINVIKLEG 196
++G+G++ V+R +D A+KKVR + F E+ L ++ L G
Sbjct: 81 RVGRGSFGEVHRMKDKQTGFQCAVKKVRLEV-------FRVEELVACAGLSSPRIVPLYG 133
Query: 197 LVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVLHR 255
V ++++ E +E L L G E + Y+ Q L GL++ H+R +LH
Sbjct: 134 AVREGPWVNIFM--ELLEGGSLGQLIKQMGC-LPEDRALYYLGQALEGLEYLHTRRILHG 190
Query: 256 DIKGSNLLIDNNGI-LKIADFGLASFYDPDQNQPLTSRVVTLWYRP-------PELLLGA 307
D+K N+L+ ++G + DFG A PD L ++T Y P PE+++G
Sbjct: 191 DVKADNVLLSSDGSRAALCDFGHALCLQPDG---LGKSLLTGDYIPGTETHMAPEVVMGK 247
Query: 308 TYYGTAVDLWSTGCILAELYAG 329
VD+WS+ C++ + G
Sbjct: 248 P-CDAKVDIWSSCCMMLHMLNG 268
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 55/107 (51%), Gaps = 6/107 (5%)
Query: 228 FSEAQVKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDN---NGILKIADFGLASFYDPD 284
F+E + M+ + + + HS + HRD+K NLL + N ILK+ DFG A +
Sbjct: 120 FTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK--ETT 177
Query: 285 QNQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYAGKP 331
+ LT+ T +Y PE +LG Y + D+WS G I+ L G P
Sbjct: 178 SHNSLTTPCYTPYYVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYP 223
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 55/107 (51%), Gaps = 6/107 (5%)
Query: 228 FSEAQVKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDN---NGILKIADFGLASFYDPD 284
F+E + M+ + + + HS + HRD+K NLL + N ILK+ DFG A +
Sbjct: 114 FTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK--ETT 171
Query: 285 QNQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYAGKP 331
+ LT+ T +Y PE +LG Y + D+WS G I+ L G P
Sbjct: 172 SHNSLTTPCYTPYYVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYP 217
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 55/107 (51%), Gaps = 6/107 (5%)
Query: 228 FSEAQVKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDN---NGILKIADFGLASFYDPD 284
F+E + M+ + + + HS + HRD+K NLL + N ILK+ DFG A +
Sbjct: 118 FTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK--ETT 175
Query: 285 QNQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYAGKP 331
+ LT+ T +Y PE +LG Y + D+WS G I+ L G P
Sbjct: 176 SHNSLTTPCYTPYYVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYP 221
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 55/107 (51%), Gaps = 6/107 (5%)
Query: 228 FSEAQVKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDN---NGILKIADFGLASFYDPD 284
F+E + M+ + + + HS + HRD+K NLL + N ILK+ DFG A +
Sbjct: 128 FTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK--ETT 185
Query: 285 QNQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYAGKP 331
+ LT+ T +Y PE +LG Y + D+WS G I+ L G P
Sbjct: 186 SHNSLTTPCYTPYYVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYP 231
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 55/107 (51%), Gaps = 6/107 (5%)
Query: 228 FSEAQVKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDN---NGILKIADFGLASFYDPD 284
F+E + M+ + + + HS + HRD+K NLL + N ILK+ DFG A +
Sbjct: 112 FTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK--ETT 169
Query: 285 QNQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYAGKP 331
+ LT+ T +Y PE +LG Y + D+WS G I+ L G P
Sbjct: 170 SHNSLTTPCYTPYYVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYP 215
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 55/107 (51%), Gaps = 6/107 (5%)
Query: 228 FSEAQVKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDN---NGILKIADFGLASFYDPD 284
F+E + M+ + + + HS + HRD+K NLL + N ILK+ DFG A +
Sbjct: 113 FTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK--ETT 170
Query: 285 QNQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYAGKP 331
+ LT+ T +Y PE +LG Y + D+WS G I+ L G P
Sbjct: 171 SHNSLTTPCYTPYYVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYP 216
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 96/220 (43%), Gaps = 27/220 (12%)
Query: 138 IGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESV----RFMAREIHILRRL-DHINVI 192
+G+G + V A K + V L+ + R + E+ IL + H+NV+
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 193 KLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSE--------------AQVKCYMQ 238
L G T + L ++ E+ + L+++ K +E + CY
Sbjct: 95 NLLGACT-KPGGPLMVIVEFCK--FGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSF 151
Query: 239 QLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLAS--FYDPDQNQPLTSRVVTL 296
Q+ G++ SR +HRD+ N+L+ ++KI DFGLA + DPD + +R+
Sbjct: 152 QVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK 211
Query: 297 WYRPPELLLGATYYGTAVDLWSTGCILAELYA-GKPIMPG 335
W P + Y D+WS G +L E+++ G PG
Sbjct: 212 WMAPETIF--DRVYTIQSDVWSFGVLLWEIFSLGASPYPG 249
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 96/224 (42%), Gaps = 31/224 (13%)
Query: 138 IGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESV----RFMAREIHILRRL-DHINVI 192
+G+G + V A K + V L+ + R + E+ IL + H+NV+
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 193 KLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSE------------------AQVK 234
L G T + L ++ E+ + L+++ K +E +
Sbjct: 97 NLLGACT-KPGGPLMVIVEFCK--FGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLI 153
Query: 235 CYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLAS--FYDPDQNQPLTSR 292
CY Q+ G++ SR +HRD+ N+L+ ++KI DFGLA + DPD + +R
Sbjct: 154 CYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 213
Query: 293 VVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYA-GKPIMPG 335
+ W P + Y D+WS G +L E+++ G PG
Sbjct: 214 LPLKWMAPETIF--DRVYTIQSDVWSFGVLLWEIFSLGASPYPG 255
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 96/224 (42%), Gaps = 31/224 (13%)
Query: 138 IGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESV----RFMAREIHILRRL-DHINVI 192
+G+G + V A K + V L+ + R + E+ IL + H+NV+
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 193 KLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSE------------------AQVK 234
L G T + L ++ E+ + L+++ K +E +
Sbjct: 95 NLLGACT-KPGGPLMVIVEFCK--FGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 151
Query: 235 CYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLAS--FYDPDQNQPLTSR 292
CY Q+ G++ SR +HRD+ N+L+ ++KI DFGLA + DPD + +R
Sbjct: 152 CYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDAR 211
Query: 293 VVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYA-GKPIMPG 335
+ W P + Y D+WS G +L E+++ G PG
Sbjct: 212 LPLKWMAPETIF--DRVYTIQSDVWSFGVLLWEIFSLGASPYPG 253
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 125/298 (41%), Gaps = 48/298 (16%)
Query: 132 FEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINV 191
E + +G+G + V +A+ + K VA+K++ E E F+ E+ L R++H N+
Sbjct: 11 IEVEEVVGRGAFGVVCKAKW--RAKDVAIKQIES---ESERKAFIV-ELRQLSRVNHPNI 64
Query: 192 IKLEGLVTSRMSCSLYLVFEYMEHDLAGLASH---PGLKFSEAQVKCYMQQLLCGLDHCH 248
+KL G + + LV EY E H P ++ A + Q G+ + H
Sbjct: 65 VKLYGACLNPVC----LVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLH 120
Query: 249 S---RGVLHRDIKGSNLLIDNNG-ILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELL 304
S + ++HRD+K NLL+ G +LKI DFG A D +T+ + + PE+
Sbjct: 121 SMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTAC----DIQTHMTNNKGSAAWMAPEVF 176
Query: 305 LGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSKLPH 364
G+ Y D++S G IL E+ + K F G P+ +R H
Sbjct: 177 EGSN-YSEKCDVFSWGIILWEVITRR-------------KPFDEIGGPA---FRIMWAVH 219
Query: 365 ATIFKPQQPYKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALRSEFFTMKPLP 422
P K+ P P +LM S DP+ R S ++ M+ P
Sbjct: 220 NGTRPP----------LIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFP 267
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 97/209 (46%), Gaps = 11/209 (5%)
Query: 130 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHI 189
D FEK+ ++G G V++ ++A K + + ++P + RE+ +L +
Sbjct: 25 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLE-IKPAIRNQIIRELQVLHECNSP 83
Query: 190 NVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHS 249
++ G S S+ + E+M+ + E + ++ GL +
Sbjct: 84 YIVGFYGAFYSDGEISICM--EHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE 141
Query: 250 R-GVLHRDIKGSNLLIDNNGILKIADFGLAS-FYDPDQNQPLTSRVVTLWYRPPELLLGA 307
+ ++HRD+K SN+L+++ G +K+ DFG++ D N S V T Y PE L G
Sbjct: 142 KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN----SFVGTRSYMSPERLQG- 196
Query: 308 TYYGTAVDLWSTGCILAELYAGK-PIMPG 335
T+Y D+WS G L E+ G+ PI G
Sbjct: 197 THYSVQSDIWSMGLSLVEMAVGRYPIGSG 225
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 130/302 (43%), Gaps = 56/302 (18%)
Query: 132 FEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVR--FMAREIHILRRLDHI 189
E + +G+G + V +A+ + K VA+K++ E ES R F+ E+ L R++H
Sbjct: 10 IEVEEVVGRGAFGVVCKAKW--RAKDVAIKQI-----ESESERKAFIV-ELRQLSRVNHP 61
Query: 190 NVIKLEGLVTSRMSCSLYLVFEYME-----HDLAGLASHPGLKFSEAQVKCYMQQLLCGL 244
N++KL G + + LV EY E + L G + P ++ A + Q G+
Sbjct: 62 NIVKLYGACLNPVC----LVMEYAEGGSLYNVLHG--AEPLPYYTAAHAMSWCLQCSQGV 115
Query: 245 DHCHS---RGVLHRDIKGSNLLIDNNG-ILKIADFGLASFYDPDQNQPLTSRVVTLWYRP 300
+ HS + ++HRD+K NLL+ G +LKI DFG A D +T+ + +
Sbjct: 116 AYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTAC----DIQTHMTNNKGSAAWMA 171
Query: 301 PELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKS 360
PE+ G+ Y D++S G IL E+ + K F G P+ +R
Sbjct: 172 PEVFEGSN-YSEKCDVFSWGIILWEVITRR-------------KPFDEIGGPA---FRIM 214
Query: 361 KLPHATIFKPQQPYKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALRSEFFTMKP 420
H P K+ P P +LM S DP+ R S ++ M+
Sbjct: 215 WAVHNGTRPP----------LIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRY 264
Query: 421 LP 422
P
Sbjct: 265 FP 266
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 96/224 (42%), Gaps = 31/224 (13%)
Query: 138 IGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESV----RFMAREIHILRRLDH-INVI 192
+G+G + V A K + V L+ + R + E+ IL + H +NV+
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 131
Query: 193 KLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSE------------------AQVK 234
L G T + L ++ E+ + L+++ K +E +
Sbjct: 132 NLLGACT-KPGGPLMVIVEFCK--FGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 188
Query: 235 CYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLAS--FYDPDQNQPLTSR 292
CY Q+ G++ SR +HRD+ N+L+ ++KI DFGLA + DPD + +R
Sbjct: 189 CYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 248
Query: 293 VVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYA-GKPIMPG 335
+ W P + Y D+WS G +L E+++ G PG
Sbjct: 249 LPLKWMAPETIF--DRVYTIQSDVWSFGVLLWEIFSLGASPYPG 290
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 94/202 (46%), Gaps = 23/202 (11%)
Query: 137 KIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINVIKLEG 196
++G+G++ V+R +D A+KKVR + F E+ L ++ L G
Sbjct: 79 RLGRGSFGEVHRMKDKQTGFQCAVKKVRLEV-------FRVEELVACAGLSSPRIVPLYG 131
Query: 197 LVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVLHR 255
V ++++ E +E L L G E + Y+ Q L GL++ H+R +LH
Sbjct: 132 AVREGPWVNIFM--ELLEGGSLGQLIKQMGC-LPEDRALYYLGQALEGLEYLHTRRILHG 188
Query: 256 DIKGSNLLIDNNGI-LKIADFGLASFYDPDQNQPLTSRVVTLWYRP-------PELLLGA 307
D+K N+L+ ++G + DFG A PD L ++T Y P PE+++G
Sbjct: 189 DVKADNVLLSSDGSRAALCDFGHALCLQPDG---LGKSLLTGDYIPGTETHMAPEVVMGK 245
Query: 308 TYYGTAVDLWSTGCILAELYAG 329
VD+WS+ C++ + G
Sbjct: 246 P-CDAKVDIWSSCCMMLHMLNG 266
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 96/224 (42%), Gaps = 31/224 (13%)
Query: 138 IGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESV----RFMAREIHILRRL-DHINVI 192
+G+G + V A K + V L+ + R + E+ IL + H+NV+
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 193 KLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSE------------------AQVK 234
L G T + L ++ E+ + L+++ K +E +
Sbjct: 95 NLLGACT-KPGGPLMVIVEFCK--FGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 151
Query: 235 CYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLAS--FYDPDQNQPLTSR 292
CY Q+ G++ SR +HRD+ N+L+ ++KI DFGLA + DPD + +R
Sbjct: 152 CYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 211
Query: 293 VVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYA-GKPIMPG 335
+ W P + Y D+WS G +L E+++ G PG
Sbjct: 212 LPLKWMAPETIF--DRVYTIQSDVWSFGVLLWEIFSLGASPYPG 253
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 80/366 (21%), Positives = 150/366 (40%), Gaps = 74/366 (20%)
Query: 121 IQGWVPRRADSFEKLDKIGQGTYSNVYRARDLDQKKI-VALKKVRFDNLEPESVRFMARE 179
+ W+ R +E + +G+GT+ V + D + VALK ++ E+ R E
Sbjct: 27 VGDWLQER---YEIVSTLGEGTFGRVVQCVDHRRGGARVALKIIKNVEKYKEAARL---E 80
Query: 180 IHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEH-----DLAGLASHPGLK------F 228
I++L +++ + + ++ F+Y H +L GL++ LK +
Sbjct: 81 INVLEKINE------KDPDNKNLCVQMFDWFDYHGHMCISFELLGLSTFDFLKDNNYLPY 134
Query: 229 SEAQVKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGI------------------- 269
QV+ QL + H + H D+K N+L N+
Sbjct: 135 PIHQVRHMAFQLCQAVKFLHDNKLTHTDLKPENILFVNSDYELTYNLEKKRDERSVKSTA 194
Query: 270 LKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYAG 329
+++ DFG A+F D + + + S T YR PE++L + D+WS GCI+ E Y G
Sbjct: 195 VRVVDFGSATF-DHEHHSTIVS---TRHYRAPEVILELGW-SQPCDVWSIGCIIFEYYVG 249
Query: 330 KPIMPGRTEVEQLHKIFKLCG---------SPSEDYWRKSKLPH-------ATIFKPQQP 373
+ E L + ++ G + + Y+ + +L + + +P
Sbjct: 250 FTLFQTHDNREHLAMMERILGPIPSRMIRKTRKQKYFYRGRLDWDENTSAGRYVRENCKP 309
Query: 374 YKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALRSEFFTMKPLPCDPSSLPKYPP 433
+R + ++ L+E++L +PA R + AL+ FF + L PP
Sbjct: 310 LRRYLTSEAEE-HHQLFDLIESMLEYEPAKRLTLGEALQHPFF---------ARLRAEPP 359
Query: 434 SKEFDA 439
+K +D+
Sbjct: 360 NKLWDS 365
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 85/189 (44%), Gaps = 9/189 (4%)
Query: 176 MAREIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKC 235
+ RE+ IL+ + H NVI L + ++ L L LA L +E +
Sbjct: 61 IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESL--TEEEATE 118
Query: 236 YMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGI----LKIADFGLASFYDPDQNQPLTS 291
+++Q+L G+ + HS + H D+K N+++ + + +KI DFGLA + D +
Sbjct: 119 FLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA--HKIDFGNEFKN 176
Query: 292 RVVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGS 351
T + PE++ G D+WS G I L +G G T+ E L + +
Sbjct: 177 IFGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE 235
Query: 352 PSEDYWRKS 360
++Y+ +
Sbjct: 236 FEDEYFSNT 244
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 54/107 (50%), Gaps = 6/107 (5%)
Query: 228 FSEAQVKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDN---NGILKIADFGLASFYDPD 284
F+E + M+ + + + HS + HRD+K NLL + N ILK+ DFG A +
Sbjct: 112 FTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK--ETT 169
Query: 285 QNQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYAGKP 331
+ LT T +Y PE +LG Y + D+WS G I+ L G P
Sbjct: 170 SHNSLTEPCYTPYYVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYP 215
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 96/224 (42%), Gaps = 31/224 (13%)
Query: 138 IGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESV----RFMAREIHILRRL-DHINVI 192
+G+G + V A K + V L+ + R + E+ IL + H+NV+
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 193 KLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSE------------------AQVK 234
L G T + L ++ E+ + L+++ K +E +
Sbjct: 86 NLLGACT-KPGGPLMVITEFCK--FGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 142
Query: 235 CYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLAS--FYDPDQNQPLTSR 292
CY Q+ G++ SR +HRD+ N+L+ ++KI DFGLA + DPD + +R
Sbjct: 143 CYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 202
Query: 293 VVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYA-GKPIMPG 335
+ W P + Y D+WS G +L E+++ G PG
Sbjct: 203 LPLKWMAPETIF--DRVYTIQSDVWSFGVLLWEIFSLGASPYPG 244
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 97/217 (44%), Gaps = 20/217 (9%)
Query: 136 DKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRF-MAREIHILRRLD-HINVIK 193
D +G+G ++ V +L + A+K + +P +R + RE+ +L + H NV++
Sbjct: 19 DVLGEGAHARVQTCINLITSQEYAVKIIE---KQPGHIRSRVFREVEMLYQCQGHRNVLE 75
Query: 194 LEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVL 253
L YLVFE M H F+E + +Q + LD H++G+
Sbjct: 76 LIEFFEEEDR--FYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIA 133
Query: 254 HRDIKGSNLLIDN-NGI--LKIADFGLASFY------DPDQNQPLTSRVVTLWYRPPELL 304
HRD+K N+L ++ N + +KI DF L S P L + + Y PE++
Sbjct: 134 HRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVV 193
Query: 305 LG----ATYYGTAVDLWSTGCILAELYAGKPIMPGRT 337
A+ Y DLWS G IL L +G P GR
Sbjct: 194 EAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRC 230
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 85/189 (44%), Gaps = 9/189 (4%)
Query: 176 MAREIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKC 235
+ RE+ IL+ + H NVI L + ++ L L LA L +E +
Sbjct: 61 IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESL--TEEEATE 118
Query: 236 YMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGI----LKIADFGLASFYDPDQNQPLTS 291
+++Q+L G+ + HS + H D+K N+++ + + +KI DFGLA + D +
Sbjct: 119 FLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA--HKIDFGNEFKN 176
Query: 292 RVVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGS 351
T + PE++ G D+WS G I L +G G T+ E L + +
Sbjct: 177 IFGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE 235
Query: 352 PSEDYWRKS 360
++Y+ +
Sbjct: 236 FEDEYFSNT 244
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 98/215 (45%), Gaps = 30/215 (13%)
Query: 137 KIGQGTYSNVYRARDLD-----QKKIVALKKVRFDNLEPESVRF-MAREIHILRRLDHIN 190
++G+G + V+ A + K +VA+K ++ + ES R RE +L L H +
Sbjct: 48 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEAS---ESARQDFQREAELLTMLQHQH 104
Query: 191 VIKLEGLVTSRMSCSLYLVFEYMEH-DLA-GLASH--------------PGLKFSEAQVK 234
+++ G+ T L +VFEYM H DL L SH PG Q+
Sbjct: 105 IVRFFGVCTE--GRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPG-PLGLGQLL 161
Query: 235 CYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLA-SFYDPDQNQPLTSRV 293
Q+ G+ + +HRD+ N L+ ++KI DFG++ Y D + +
Sbjct: 162 AVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTM 221
Query: 294 VTLWYRPPELLLGATYYGTAVDLWSTGCILAELYA 328
+ + + PPE +L + T D+WS G +L E++
Sbjct: 222 LPIRWMPPESIL-YRKFTTESDVWSFGVVLWEIFT 255
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 51/95 (53%), Gaps = 4/95 (4%)
Query: 236 YMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLAS--FYDPDQNQPLTSRV 293
Y Q+ G++ SR +HRD+ N+L+ N ++KI DFGLA + +PD + +R+
Sbjct: 204 YSFQVARGMEFLSSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRL 263
Query: 294 VTLWYRPPELLLGATYYGTAVDLWSTGCILAELYA 328
W P + Y T D+WS G +L E+++
Sbjct: 264 PLKWMAPESIF--DKIYSTKSDVWSYGVLLWEIFS 296
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 94/222 (42%), Gaps = 27/222 (12%)
Query: 138 IGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESV----RFMAREIHILRRL-DHINVI 192
+G+G + V A K + V L+ + R + E+ IL + H+NV+
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 193 KLEGLVTS----RMSCSLYLVF------------EYMEHDLAGLASHPGLKFSEAQVKCY 236
L G T M + + F E++ + +A + E + CY
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI-CY 144
Query: 237 MQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLAS--FYDPDQNQPLTSRVV 294
Q+ G++ SR +HRD+ N+L+ ++KI DFGLA + DPD + +R+
Sbjct: 145 SFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 204
Query: 295 TLWYRPPELLLGATYYGTAVDLWSTGCILAELYA-GKPIMPG 335
W P + Y D+WS G +L E+++ G PG
Sbjct: 205 LKWMAPETIF--DRVYTIQSDVWSFGVLLWEIFSLGASPYPG 244
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 85/189 (44%), Gaps = 9/189 (4%)
Query: 176 MAREIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKC 235
+ RE+ IL+ + H NVI L + ++ L L LA L +E +
Sbjct: 61 IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESL--TEEEATE 118
Query: 236 YMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGI----LKIADFGLASFYDPDQNQPLTS 291
+++Q+L G+ + HS + H D+K N+++ + + +KI DFGLA + D +
Sbjct: 119 FLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA--HKIDFGNEFKN 176
Query: 292 RVVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGS 351
T + PE++ G D+WS G I L +G G T+ E L + +
Sbjct: 177 IFGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE 235
Query: 352 PSEDYWRKS 360
++Y+ +
Sbjct: 236 FEDEYFSNT 244
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 85/189 (44%), Gaps = 9/189 (4%)
Query: 176 MAREIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKC 235
+ RE+ IL+ + H NVI L + ++ L L LA L +E +
Sbjct: 61 IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESL--TEEEATE 118
Query: 236 YMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGI----LKIADFGLASFYDPDQNQPLTS 291
+++Q+L G+ + HS + H D+K N+++ + + +KI DFGLA + D +
Sbjct: 119 FLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA--HKIDFGNEFKN 176
Query: 292 RVVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGS 351
T + PE++ G D+WS G I L +G G T+ E L + +
Sbjct: 177 IFGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE 235
Query: 352 PSEDYWRKS 360
++Y+ +
Sbjct: 236 FEDEYFSNT 244
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 85/189 (44%), Gaps = 9/189 (4%)
Query: 176 MAREIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKC 235
+ RE+ IL+ + H NVI L + ++ L L LA L +E +
Sbjct: 60 IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESL--TEEEATE 117
Query: 236 YMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGI----LKIADFGLASFYDPDQNQPLTS 291
+++Q+L G+ + HS + H D+K N+++ + + +KI DFGLA + D +
Sbjct: 118 FLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA--HKIDFGNEFKN 175
Query: 292 RVVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGS 351
T + PE++ G D+WS G I L +G G T+ E L + +
Sbjct: 176 IFGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE 234
Query: 352 PSEDYWRKS 360
++Y+ +
Sbjct: 235 FEDEYFSNT 243
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 85/189 (44%), Gaps = 9/189 (4%)
Query: 176 MAREIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKC 235
+ RE+ IL+ + H NVI L + ++ L L LA L +E +
Sbjct: 60 IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESL--TEEEATE 117
Query: 236 YMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGI----LKIADFGLASFYDPDQNQPLTS 291
+++Q+L G+ + HS + H D+K N+++ + + +KI DFGLA + D +
Sbjct: 118 FLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA--HKIDFGNEFKN 175
Query: 292 RVVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGS 351
T + PE++ G D+WS G I L +G G T+ E L + +
Sbjct: 176 IFGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE 234
Query: 352 PSEDYWRKS 360
++Y+ +
Sbjct: 235 FEDEYFSNT 243
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 97/214 (45%), Gaps = 27/214 (12%)
Query: 137 KIGQGTYSNVYRARDLD-----QKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINV 191
++G+G + V+ A + K +VA+K ++ L + RE +L L H ++
Sbjct: 22 ELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAAR--KDFQREAELLTNLQHEHI 79
Query: 192 IKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPG---------------LKFSEAQVKC 235
+K G+ L +VFEYM+H DL G + +Q+
Sbjct: 80 VKFYGVCGD--GDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLH 137
Query: 236 YMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLA-SFYDPDQNQPLTSRVV 294
Q+ G+ + S+ +HRD+ N L+ N ++KI DFG++ Y D + ++
Sbjct: 138 IASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTML 197
Query: 295 TLWYRPPELLLGATYYGTAVDLWSTGCILAELYA 328
+ + PPE ++ + T D+WS G IL E++
Sbjct: 198 PIRWMPPESIMYRK-FTTESDVWSFGVILWEIFT 230
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 85/189 (44%), Gaps = 9/189 (4%)
Query: 176 MAREIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKC 235
+ RE+ IL+ + H NVI L + ++ L L LA L +E +
Sbjct: 61 IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESL--TEEEATE 118
Query: 236 YMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGI----LKIADFGLASFYDPDQNQPLTS 291
+++Q+L G+ + HS + H D+K N+++ + + +KI DFGLA + D +
Sbjct: 119 FLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA--HKIDFGNEFKN 176
Query: 292 RVVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGS 351
T + PE++ G D+WS G I L +G G T+ E L + +
Sbjct: 177 IFGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE 235
Query: 352 PSEDYWRKS 360
++Y+ +
Sbjct: 236 FEDEYFSNT 244
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 85/189 (44%), Gaps = 9/189 (4%)
Query: 176 MAREIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKC 235
+ RE+ IL+ + H NVI L + ++ L L LA L +E +
Sbjct: 61 IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESL--TEEEATE 118
Query: 236 YMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGI----LKIADFGLASFYDPDQNQPLTS 291
+++Q+L G+ + HS + H D+K N+++ + + +KI DFGLA + D +
Sbjct: 119 FLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA--HKIDFGNEFKN 176
Query: 292 RVVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGS 351
T + PE++ G D+WS G I L +G G T+ E L + +
Sbjct: 177 IFGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE 235
Query: 352 PSEDYWRKS 360
++Y+ +
Sbjct: 236 FEDEYFSNT 244
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 85/189 (44%), Gaps = 9/189 (4%)
Query: 176 MAREIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKC 235
+ RE+ IL+ + H NVI L + ++ L L LA L +E +
Sbjct: 61 IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESL--TEEEATE 118
Query: 236 YMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGI----LKIADFGLASFYDPDQNQPLTS 291
+++Q+L G+ + HS + H D+K N+++ + + +KI DFGLA + D +
Sbjct: 119 FLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA--HKIDFGNEFKN 176
Query: 292 RVVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGS 351
T + PE++ G D+WS G I L +G G T+ E L + +
Sbjct: 177 IFGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE 235
Query: 352 PSEDYWRKS 360
++Y+ +
Sbjct: 236 FEDEYFSNT 244
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 85/189 (44%), Gaps = 9/189 (4%)
Query: 176 MAREIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKC 235
+ RE+ IL+ + H NVI L + ++ L L LA L +E +
Sbjct: 61 IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESL--TEEEATE 118
Query: 236 YMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGI----LKIADFGLASFYDPDQNQPLTS 291
+++Q+L G+ + HS + H D+K N+++ + + +KI DFGLA + D +
Sbjct: 119 FLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA--HKIDFGNEFKN 176
Query: 292 RVVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGS 351
T + PE++ G D+WS G I L +G G T+ E L + +
Sbjct: 177 IFGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE 235
Query: 352 PSEDYWRKS 360
++Y+ +
Sbjct: 236 FEDEYFSNT 244
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 102/226 (45%), Gaps = 14/226 (6%)
Query: 130 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHI 189
+ E L ++G GT V++ R ++A+K++R + E+ R + +L+ D
Sbjct: 25 NDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCP 84
Query: 190 NVIKLEGLVTSRMSCSLYLVFEYM---EHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDH 246
+++ G + + +++ E M L P + ++ + + L L
Sbjct: 85 YIVQCFGTFIT--NTDVFIAMELMGTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKE 142
Query: 247 CHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELL-- 304
H GV+HRD+K SN+L+D G +K+ DFG++ D+ + ++ Y PE +
Sbjct: 143 KH--GVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSAGCAA--YMAPERIDP 198
Query: 305 --LGATYYGTAVDLWSTGCILAELYAGK-PIMPGRTEVEQLHKIFK 347
Y D+WS G L EL G+ P +T+ E L K+ +
Sbjct: 199 PDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQ 244
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 85/189 (44%), Gaps = 9/189 (4%)
Query: 176 MAREIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKC 235
+ RE+ IL+ + H NVI L + ++ L L LA L +E +
Sbjct: 61 IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESL--TEEEATE 118
Query: 236 YMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGI----LKIADFGLASFYDPDQNQPLTS 291
+++Q+L G+ + HS + H D+K N+++ + + +KI DFGLA + D +
Sbjct: 119 FLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA--HKIDFGNEFKN 176
Query: 292 RVVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGS 351
T + PE++ G D+WS G I L +G G T+ E L + +
Sbjct: 177 IFGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE 235
Query: 352 PSEDYWRKS 360
++Y+ +
Sbjct: 236 FEDEYFSNT 244
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 106/232 (45%), Gaps = 19/232 (8%)
Query: 123 GWVPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHI 182
GW + + L IG+G + +V K VA+K ++ D + F+A E +
Sbjct: 6 GWALNMKE-LKLLQTIGKGEFGDVMLGDYRGNK--VAVKCIKND---ATAQAFLA-EASV 58
Query: 183 LRRLDHINVIKLEGLVTSRMSCSLYLVFEYM-EHDLAGLASHPGLKFSEAQVKCYMQQLL 241
+ +L H N+++L G++ LY+V EYM + L G +
Sbjct: 59 MTQLRHSNLVQLLGVIVEEKG-GLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDV 117
Query: 242 C-GLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRP 300
C +++ +HRD+ N+L+ + + K++DFGL Q+ T ++ W P
Sbjct: 118 CEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD---TGKLPVKWTAP 174
Query: 301 PELLLGATYYGTAVDLWSTGCILAELYA-GK---PIMPGRTEVEQLHKIFKL 348
L A + T D+WS G +L E+Y+ G+ P +P + V ++ K +K+
Sbjct: 175 EALREAA--FSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKM 224
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 95/224 (42%), Gaps = 31/224 (13%)
Query: 138 IGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESV----RFMAREIHILRRL-DHINVI 192
+G+G + V A K + V L+ + R + E+ IL + H+NV+
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 193 KLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSE------------------AQVK 234
L G T + L ++ E+ + L+++ K +E +
Sbjct: 86 NLLGACT-KPGGPLMVIVEFCK--FGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 142
Query: 235 CYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLAS--FYDPDQNQPLTSR 292
CY Q+ G++ SR +HRD+ N+L+ ++KI DFGLA DPD + +R
Sbjct: 143 CYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 202
Query: 293 VVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYA-GKPIMPG 335
+ W P + Y D+WS G +L E+++ G PG
Sbjct: 203 LPLKWMAPETIF--DRVYTIQSDVWSFGVLLWEIFSLGASPYPG 244
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 85/189 (44%), Gaps = 9/189 (4%)
Query: 176 MAREIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKC 235
+ RE+ IL+ + H NVI L + ++ L L LA L +E +
Sbjct: 61 IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESL--TEEEATE 118
Query: 236 YMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGI----LKIADFGLASFYDPDQNQPLTS 291
+++Q+L G+ + HS + H D+K N+++ + + +KI DFGLA + D +
Sbjct: 119 FLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA--HKIDFGNEFKN 176
Query: 292 RVVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGS 351
T + PE++ G D+WS G I L +G G T+ E L + +
Sbjct: 177 IFGTPAFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE 235
Query: 352 PSEDYWRKS 360
++Y+ +
Sbjct: 236 FEDEYFSNT 244
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 85/189 (44%), Gaps = 9/189 (4%)
Query: 176 MAREIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKC 235
+ RE+ IL+ + H NVI L + ++ L L LA L +E +
Sbjct: 61 IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESL--TEEEATE 118
Query: 236 YMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGI----LKIADFGLASFYDPDQNQPLTS 291
+++Q+L G+ + HS + H D+K N+++ + + +KI DFGLA + D +
Sbjct: 119 FLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA--HKIDFGNEFKN 176
Query: 292 RVVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGS 351
T + PE++ G D+WS G I L +G G T+ E L + +
Sbjct: 177 IFGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE 235
Query: 352 PSEDYWRKS 360
++Y+ +
Sbjct: 236 FEDEYFSNT 244
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 95/223 (42%), Gaps = 30/223 (13%)
Query: 138 IGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESV----RFMAREIHILRRL-DHINVI 192
+G+G + V A K + V L+ + R + E+ IL + H+NV+
Sbjct: 36 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 95
Query: 193 KLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSE-----------------AQVKC 235
L G T + L ++ E+ + L+++ K +E + C
Sbjct: 96 NLLGACT-KPGGPLMVIVEFCK--FGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLIC 152
Query: 236 YMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLAS--FYDPDQNQPLTSRV 293
Y Q+ G++ SR +HRD+ N+L+ ++KI DFGLA DPD + +R+
Sbjct: 153 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL 212
Query: 294 VTLWYRPPELLLGATYYGTAVDLWSTGCILAELYA-GKPIMPG 335
W P + Y D+WS G +L E+++ G PG
Sbjct: 213 PLKWMAPETIF--DRVYTIQSDVWSFGVLLWEIFSLGASPYPG 253
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 95/203 (46%), Gaps = 24/203 (11%)
Query: 138 IGQGTYSNVYRARDLDQKK------IVALKKVRFDNLEPESVRFMAREIHILRRLDHINV 191
IG+G + VY +DQ + I +L ++ E + V RE ++R L+H NV
Sbjct: 29 IGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRIT----EMQQVEAFLREGLLMRGLNHPNV 84
Query: 192 IKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSR 250
+ L G++ +++ YM H DL P + + + Q+ G+++ +
Sbjct: 85 LALIGIMLPPEGLP-HVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQ 143
Query: 251 GVLHRDIKGSNLLIDNNGILKIADFGLA------SFYDPDQNQPLTSRVVTLWYRPPELL 304
+HRD+ N ++D + +K+ADFGLA +Y Q++ +R+ W L
Sbjct: 144 KFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHR--HARLPVKWTALESL- 200
Query: 305 LGATY-YGTAVDLWSTGCILAEL 326
TY + T D+WS G +L EL
Sbjct: 201 --QTYRFTTKSDVWSFGVLLWEL 221
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 98/215 (45%), Gaps = 30/215 (13%)
Query: 137 KIGQGTYSNVYRARDLD-----QKKIVALKKVRFDNLEPESVRF-MAREIHILRRLDHIN 190
++G+G + V+ A + K +VA+K ++ + ES R RE +L L H +
Sbjct: 19 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEAS---ESARQDFQREAELLTMLQHQH 75
Query: 191 VIKLEGLVTSRMSCSLYLVFEYMEH-DLA-GLASH--------------PGLKFSEAQVK 234
+++ G+ T L +VFEYM H DL L SH PG Q+
Sbjct: 76 IVRFFGVCTE--GRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPG-PLGLGQLL 132
Query: 235 CYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLA-SFYDPDQNQPLTSRV 293
Q+ G+ + +HRD+ N L+ ++KI DFG++ Y D + +
Sbjct: 133 AVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTM 192
Query: 294 VTLWYRPPELLLGATYYGTAVDLWSTGCILAELYA 328
+ + + PPE +L + T D+WS G +L E++
Sbjct: 193 LPIRWMPPESIL-YRKFTTESDVWSFGVVLWEIFT 226
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 93/195 (47%), Gaps = 13/195 (6%)
Query: 138 IGQGTYSNVYRARDLDQKK---IVALKKVRFDNLEPESVR--FMAREIHILRRLDHINVI 192
IG+G + +V++ + + VA+K + N +SVR F+ +E +R+ DH +++
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCK--NCTSDSVREKFL-QEALTMRQFDHPHIV 74
Query: 193 KLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRG 251
KL G++T ++++ E +L A + Y QL L + S+
Sbjct: 75 KLIGVITEN---PVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKR 131
Query: 252 VLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGATYYG 311
+HRDI N+L+ +N +K+ DFGL+ + + + + + + PE + +
Sbjct: 132 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIKWMAPE-SINFRRFT 190
Query: 312 TAVDLWSTGCILAEL 326
+A D+W G + E+
Sbjct: 191 SASDVWMFGVCMWEI 205
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 93/195 (47%), Gaps = 13/195 (6%)
Query: 138 IGQGTYSNVYRARDLDQKK---IVALKKVRFDNLEPESVR--FMAREIHILRRLDHINVI 192
IG+G + +V++ + + VA+K + N +SVR F+ +E +R+ DH +++
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCK--NCTSDSVREKFL-QEALTMRQFDHPHIV 454
Query: 193 KLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRG 251
KL G++T ++++ E +L A + Y QL L + S+
Sbjct: 455 KLIGVITEN---PVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKR 511
Query: 252 VLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGATYYG 311
+HRDI N+L+ +N +K+ DFGL+ + + + + + + PE + +
Sbjct: 512 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE-SINFRRFT 570
Query: 312 TAVDLWSTGCILAEL 326
+A D+W G + E+
Sbjct: 571 SASDVWMFGVCMWEI 585
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 95/224 (42%), Gaps = 31/224 (13%)
Query: 138 IGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESV----RFMAREIHILRRL-DHINVI 192
+G+G + V A K + V L+ + R + E+ IL + H+NV+
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 193 KLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSE------------------AQVK 234
L G T + L ++ E+ + L+++ K +E +
Sbjct: 95 NLLGACT-KPGGPLMVIVEFCK--FGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 151
Query: 235 CYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLAS--FYDPDQNQPLTSR 292
CY Q+ G++ SR +HRD+ N+L+ ++KI DFGLA DPD + +R
Sbjct: 152 CYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 211
Query: 293 VVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYA-GKPIMPG 335
+ W P + Y D+WS G +L E+++ G PG
Sbjct: 212 LPLKWMAPETIF--DRVYTIQSDVWSFGVLLWEIFSLGASPYPG 253
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 130/319 (40%), Gaps = 55/319 (17%)
Query: 129 ADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRL-D 187
D +E + IG G+YS R A+K + +P EI IL R
Sbjct: 21 TDGYEVKEDIGVGSYSVCKRCIHKATNXEFAVKIIDKSKRDP------TEEIEILLRYGQ 74
Query: 188 HINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLK---FSEAQVKCYMQQLLCGL 244
H N+I L+ + +Y+V E + G L+ FSE + + + +
Sbjct: 75 HPNIITLKDVYDD--GKYVYVVTELXK---GGELLDKILRQKFFSEREASAVLFTITKTV 129
Query: 245 DHCHSRGVLHRDIKGSNLL-IDNNG---ILKIADFGLASFYDPDQNQPLTSRVVTLWYRP 300
++ H++GV+HRD+K SN+L +D +G ++I DFG A +N L + T +
Sbjct: 130 EYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRA-ENGLLXTPCYTANFVA 188
Query: 301 PELLLGATYYGTAVDLWSTGCILAELYAG-KPIM--PGRTEVEQLHKIFKLCGSPSEDYW 357
PE +L Y A D+WS G +L G P P T E L +I S S YW
Sbjct: 189 PE-VLERQGYDAACDIWSLGVLLYTXLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYW 247
Query: 358 RKSKLPHATIFKPQQPYKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALRSEFFT 417
V++T KD L+ L +DP R +AA LR
Sbjct: 248 NS------------------VSDTAKD-------LVSKXLHVDPHQRLTAALVLR----- 277
Query: 418 MKPLPCDPSSLPKYPPSKE 436
P LP+Y +++
Sbjct: 278 -HPWIVHWDQLPQYQLNRQ 295
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 98/215 (45%), Gaps = 30/215 (13%)
Query: 137 KIGQGTYSNVYRARDLD-----QKKIVALKKVRFDNLEPESVRF-MAREIHILRRLDHIN 190
++G+G + V+ A + K +VA+K ++ + ES R RE +L L H +
Sbjct: 25 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEAS---ESARQDFQREAELLTMLQHQH 81
Query: 191 VIKLEGLVTSRMSCSLYLVFEYMEH-DLA-GLASH--------------PGLKFSEAQVK 234
+++ G+ T L +VFEYM H DL L SH PG Q+
Sbjct: 82 IVRFFGVCTE--GRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPG-PLGLGQLL 138
Query: 235 CYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLA-SFYDPDQNQPLTSRV 293
Q+ G+ + +HRD+ N L+ ++KI DFG++ Y D + +
Sbjct: 139 AVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTM 198
Query: 294 VTLWYRPPELLLGATYYGTAVDLWSTGCILAELYA 328
+ + + PPE +L + T D+WS G +L E++
Sbjct: 199 LPIRWMPPESIL-YRKFTTESDVWSFGVVLWEIFT 232
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 53/104 (50%), Gaps = 5/104 (4%)
Query: 235 CYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLAS--FYDPDQNQPLTSR 292
CY Q+ G++ SR +HRD+ N+L+ ++KI DFGLA + DPD + +R
Sbjct: 204 CYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 263
Query: 293 VVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYA-GKPIMPG 335
+ W P + Y D+WS G +L E+++ G PG
Sbjct: 264 LPLKWMAPETIF--DRVYTIQSDVWSFGVLLWEIFSLGASPYPG 305
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 53/104 (50%), Gaps = 5/104 (4%)
Query: 235 CYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLAS--FYDPDQNQPLTSR 292
CY Q+ G++ SR +HRD+ N+L+ ++KI DFGLA + DPD + +R
Sbjct: 202 CYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 261
Query: 293 VVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYA-GKPIMPG 335
+ W P + Y D+WS G +L E+++ G PG
Sbjct: 262 LPLKWMAPETIF--DRVYTIQSDVWSFGVLLWEIFSLGASPYPG 303
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 95/224 (42%), Gaps = 31/224 (13%)
Query: 138 IGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESV----RFMAREIHILRRL-DHINVI 192
+G+G + V A K + V L+ + R + E+ IL + H+NV+
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 193 KLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSE------------------AQVK 234
L G T + L ++ E+ + L+++ K +E +
Sbjct: 86 NLLGACT-KPGGPLMVITEFCK--FGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 142
Query: 235 CYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLAS--FYDPDQNQPLTSR 292
CY Q+ G++ SR +HRD+ N+L+ ++KI DFGLA DPD + +R
Sbjct: 143 CYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 202
Query: 293 VVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYA-GKPIMPG 335
+ W P + Y D+WS G +L E+++ G PG
Sbjct: 203 LPLKWMAPETIF--DRVYTIQSDVWSFGVLLWEIFSLGASPYPG 244
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 53/104 (50%), Gaps = 5/104 (4%)
Query: 235 CYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLAS--FYDPDQNQPLTSR 292
CY Q+ G++ SR +HRD+ N+L+ ++KI DFGLA + DPD + +R
Sbjct: 197 CYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 256
Query: 293 VVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYA-GKPIMPG 335
+ W P + Y D+WS G +L E+++ G PG
Sbjct: 257 LPLKWMAPETIF--DRVYTIQSDVWSFGVLLWEIFSLGASPYPG 298
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 53/104 (50%), Gaps = 5/104 (4%)
Query: 235 CYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLAS--FYDPDQNQPLTSR 292
CY Q+ G++ SR +HRD+ N+L+ ++KI DFGLA + DPD + +R
Sbjct: 195 CYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 254
Query: 293 VVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYA-GKPIMPG 335
+ W P + Y D+WS G +L E+++ G PG
Sbjct: 255 LPLKWMAPETIF--DRVYTIQSDVWSFGVLLWEIFSLGASPYPG 296
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 97/210 (46%), Gaps = 14/210 (6%)
Query: 129 ADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDH 188
+D+F + +G+G + VY+ R L +VA+K+++ + + ++F E+ ++ H
Sbjct: 37 SDNFSNKNILGRGGFGKVYKGR-LADGTLVAVKRLKEERXQGGELQFQT-EVEMISMAVH 94
Query: 189 INVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLA------SHPGLKFSEAQ-VKCYMQQLL 241
N+++L G + LV+ YM + S P L + + Q + + L
Sbjct: 95 RNLLRLRGFCMT--PTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGL 152
Query: 242 CGL-DHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRP 300
L DHC + ++HRD+K +N+L+D + DFGLA D + T+ +
Sbjct: 153 AYLHDHCDPK-IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGTIGHIA 211
Query: 301 PELLLGATYYGTAVDLWSTGCILAELYAGK 330
PE L D++ G +L EL G+
Sbjct: 212 PE-YLSTGKSSEKTDVFGYGVMLLELITGQ 240
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 126/322 (39%), Gaps = 48/322 (14%)
Query: 132 FEKLDKIGQG--TYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHI 189
+E L IG+G V AR + V ++++ + E V F+ E+H+ + +H
Sbjct: 11 YELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHP 70
Query: 190 NVIKLEGLVTSRMSCSLYLVFEYMEHDLAG--LASHPGLKFSEAQVKCYMQQLLCGLDHC 247
N++ T L++V +M + A + +H +E + +Q +L LD+
Sbjct: 71 NIVPYRA--TFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYI 128
Query: 248 HSRGVLHRDIKGSNLLIDNNGILKIADFGL---ASFYDPDQNQ------PLTSRVVTLWY 298
H G +HR +K S++LI +G K+ GL S Q Q P S V W
Sbjct: 129 HHMGYVHRSVKASHILISVDG--KVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWL 186
Query: 299 RPPELLLGATYYGTAVDLWSTGCILAELYAGK-PI--MPG-RTEVEQLHKIF-------- 346
P L Y D++S G EL G P MP + +E+L+
Sbjct: 187 SPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTST 246
Query: 347 ----KLCGSPS--------EDYWRKSKLPHATIFKPQQPYKRCVAETFKDFPAPALALME 394
+L SPS D S + P PY R + F F +E
Sbjct: 247 IPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHF-------VE 299
Query: 395 TLLSIDPADRGSAASALRSEFF 416
L +P R SA++ L FF
Sbjct: 300 QCLQRNPDARPSASTLLNHSFF 321
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 100/230 (43%), Gaps = 26/230 (11%)
Query: 136 DKIGQGTYSNVYRAR-DLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHI-NVIK 193
D IG+G + V +AR D ++ A K + + R A E+ +L +L H N+I
Sbjct: 31 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIIN 90
Query: 194 LEGLVTSRMSCSLYLVFEY---------------MEHDLA-GLASHPGLKFSEAQVKCYM 237
L G R LYL EY +E D A +A+ S Q+ +
Sbjct: 91 LLGACEHR--GYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA 148
Query: 238 QQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLW 297
+ G+D+ + +HRD+ N+L+ N + KIADFGL+ + + + R+ W
Sbjct: 149 ADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTM-GRLPVRW 207
Query: 298 YRPPELLLGATYYGTAVDLWSTGCILAELYA--GKPIMPGRTEVEQLHKI 345
L + Y T D+WS G +L E+ + G P G T E K+
Sbjct: 208 MAIES--LNYSVYTTNSDVWSYGVLLWEIVSLGGTPYC-GMTCAELYEKL 254
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 98/227 (43%), Gaps = 20/227 (8%)
Query: 125 VPRRADSFEKL--DKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHI 182
+P + + KL + +G+G Y+ V A L K A+K + S F RE+
Sbjct: 6 LPGKFEDMYKLTSELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVF--REVET 63
Query: 183 LRRLD-HINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLL 241
L + + N+++L YLVFE ++ F+E + ++ +
Sbjct: 64 LYQCQGNKNILELIEFFEDDTR--FYLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVA 121
Query: 242 CGLDHCHSRGVLHRDIKGSNLLIDN---NGILKIADFGLASFY------DPDQNQPLTSR 292
LD H++G+ HRD+K N+L ++ +KI DF L S P LT+
Sbjct: 122 AALDFLHTKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTP 181
Query: 293 VVTLWYRPPELLL----GATYYGTAVDLWSTGCILAELYAGKPIMPG 335
+ Y PE++ AT+Y DLWS G +L + +G P G
Sbjct: 182 CGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVG 228
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 93/195 (47%), Gaps = 13/195 (6%)
Query: 138 IGQGTYSNVYRARDLDQKK---IVALKKVRFDNLEPESVR--FMAREIHILRRLDHINVI 192
IG+G + +V++ + + VA+K + N +SVR F+ +E +R+ DH +++
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCK--NCTSDSVREKFL-QEALTMRQFDHPHIV 76
Query: 193 KLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRG 251
KL G++T ++++ E +L A + Y QL L + S+
Sbjct: 77 KLIGVITEN---PVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKR 133
Query: 252 VLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGATYYG 311
+HRDI N+L+ +N +K+ DFGL+ + + + + + + PE + +
Sbjct: 134 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE-SINFRRFT 192
Query: 312 TAVDLWSTGCILAEL 326
+A D+W G + E+
Sbjct: 193 SASDVWMFGVCMWEI 207
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 93/195 (47%), Gaps = 13/195 (6%)
Query: 138 IGQGTYSNVYRARDLDQKK---IVALKKVRFDNLEPESVR--FMAREIHILRRLDHINVI 192
IG+G + +V++ + + VA+K + N +SVR F+ +E +R+ DH +++
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCK--NCTSDSVREKFL-QEALTMRQFDHPHIV 77
Query: 193 KLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRG 251
KL G++T ++++ E +L A + Y QL L + S+
Sbjct: 78 KLIGVITEN---PVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKR 134
Query: 252 VLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGATYYG 311
+HRDI N+L+ +N +K+ DFGL+ + + + + + + PE + +
Sbjct: 135 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE-SINFRRFT 193
Query: 312 TAVDLWSTGCILAEL 326
+A D+W G + E+
Sbjct: 194 SASDVWMFGVCMWEI 208
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 125/322 (38%), Gaps = 48/322 (14%)
Query: 132 FEKLDKIGQG--TYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHI 189
+E L IG+G V AR + V ++++ + E V F+ E+H+ + +H
Sbjct: 27 YELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHP 86
Query: 190 NVIKLEGLVTSRMSCSLYLVFEYMEHDLAG--LASHPGLKFSEAQVKCYMQQLLCGLDHC 247
N++ T L++V +M + A + +H +E + +Q +L LD+
Sbjct: 87 NIVPYRA--TFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYI 144
Query: 248 HSRGVLHRDIKGSNLLIDNNGILKIADFGL---ASFYDPDQNQ------PLTSRVVTLWY 298
H G +HR +K S++LI +G K+ GL S Q Q P S V W
Sbjct: 145 HHMGYVHRSVKASHILISVDG--KVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWL 202
Query: 299 RPPELLLGATYYGTAVDLWSTGCILAELYAGK-PI--MPG-RTEVEQLHKIF-------- 346
P L Y D++S G EL G P MP + +E+L+
Sbjct: 203 SPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTST 262
Query: 347 ----KLCGSPSEDYWRKSKLPHATIFKPQ--------QPYKRCVAETFKDFPAPALALME 394
+L SPS T P+ PY R + F F +E
Sbjct: 263 IPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHF-------VE 315
Query: 395 TLLSIDPADRGSAASALRSEFF 416
L +P R SA++ L FF
Sbjct: 316 QCLQRNPDARPSASTLLNHSFF 337
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 93/195 (47%), Gaps = 13/195 (6%)
Query: 138 IGQGTYSNVYRARDLDQKK---IVALKKVRFDNLEPESVR--FMAREIHILRRLDHINVI 192
IG+G + +V++ + + VA+K + N +SVR F+ +E +R+ DH +++
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCK--NCTSDSVREKFL-QEALTMRQFDHPHIV 79
Query: 193 KLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRG 251
KL G++T ++++ E +L A + Y QL L + S+
Sbjct: 80 KLIGVITEN---PVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKR 136
Query: 252 VLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGATYYG 311
+HRDI N+L+ +N +K+ DFGL+ + + + + + + PE + +
Sbjct: 137 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE-SINFRRFT 195
Query: 312 TAVDLWSTGCILAEL 326
+A D+W G + E+
Sbjct: 196 SASDVWMFGVCMWEI 210
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 100/230 (43%), Gaps = 26/230 (11%)
Query: 136 DKIGQGTYSNVYRAR-DLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHI-NVIK 193
D IG+G + V +AR D ++ A K + + R A E+ +L +L H N+I
Sbjct: 21 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIIN 80
Query: 194 LEGLVTSRMSCSLYLVFEY---------------MEHDLA-GLASHPGLKFSEAQVKCYM 237
L G R LYL EY +E D A +A+ S Q+ +
Sbjct: 81 LLGACEHR--GYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA 138
Query: 238 QQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLW 297
+ G+D+ + +HRD+ N+L+ N + KIADFGL+ + + + R+ W
Sbjct: 139 ADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTM-GRLPVRW 197
Query: 298 YRPPELLLGATYYGTAVDLWSTGCILAELYA--GKPIMPGRTEVEQLHKI 345
L + Y T D+WS G +L E+ + G P G T E K+
Sbjct: 198 MAIES--LNYSVYTTNSDVWSYGVLLWEIVSLGGTPYC-GMTCAELYEKL 244
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 105/232 (45%), Gaps = 19/232 (8%)
Query: 123 GWVPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHI 182
GW + + L IG+G + +V K VA+K ++ D + F+A E +
Sbjct: 15 GWALNMKE-LKLLQTIGKGEFGDVMLGDYRGNK--VAVKCIKND---ATAQAFLA-EASV 67
Query: 183 LRRLDHINVIKLEGLVTSRMSCSLYLVFEYM-EHDLAGLASHPGLKFSEAQVKCYMQQLL 241
+ +L H N+++L G++ LY+V EYM + L G +
Sbjct: 68 MTQLRHSNLVQLLGVIVEEKG-GLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDV 126
Query: 242 C-GLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRP 300
C +++ +HRD+ N+L+ + + K++DFGL Q+ T ++ W P
Sbjct: 127 CEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD---TGKLPVKWTAP 183
Query: 301 PELLLGATYYGTAVDLWSTGCILAELYA-GK---PIMPGRTEVEQLHKIFKL 348
L + T D+WS G +L E+Y+ G+ P +P + V ++ K +K+
Sbjct: 184 EA--LREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKM 233
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 93/195 (47%), Gaps = 13/195 (6%)
Query: 138 IGQGTYSNVYRARDLDQKK---IVALKKVRFDNLEPESVR--FMAREIHILRRLDHINVI 192
IG+G + +V++ + + VA+K + N +SVR F+ +E +R+ DH +++
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCK--NCTSDSVREKFL-QEALTMRQFDHPHIV 102
Query: 193 KLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRG 251
KL G++T ++++ E +L A + Y QL L + S+
Sbjct: 103 KLIGVITEN---PVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKR 159
Query: 252 VLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGATYYG 311
+HRDI N+L+ +N +K+ DFGL+ + + + + + + PE + +
Sbjct: 160 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE-SINFRRFT 218
Query: 312 TAVDLWSTGCILAEL 326
+A D+W G + E+
Sbjct: 219 SASDVWMFGVCMWEI 233
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 93/195 (47%), Gaps = 13/195 (6%)
Query: 138 IGQGTYSNVYRARDLDQKK---IVALKKVRFDNLEPESVR--FMAREIHILRRLDHINVI 192
IG+G + +V++ + + VA+K + N +SVR F+ +E +R+ DH +++
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCK--NCTSDSVREKFL-QEALTMRQFDHPHIV 71
Query: 193 KLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRG 251
KL G++T ++++ E +L A + Y QL L + S+
Sbjct: 72 KLIGVITEN---PVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKR 128
Query: 252 VLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGATYYG 311
+HRDI N+L+ +N +K+ DFGL+ + + + + + + PE + +
Sbjct: 129 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE-SINFRRFT 187
Query: 312 TAVDLWSTGCILAEL 326
+A D+W G + E+
Sbjct: 188 SASDVWMFGVCMWEI 202
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 105/232 (45%), Gaps = 19/232 (8%)
Query: 123 GWVPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHI 182
GW + + L IG+G + +V K VA+K ++ D + F+A E +
Sbjct: 187 GWALNMKE-LKLLQTIGKGEFGDVMLGDYRGNK--VAVKCIKND---ATAQAFLA-EASV 239
Query: 183 LRRLDHINVIKLEGLVTSRMSCSLYLVFEYM-EHDLAGLASHPGLKFSEAQVKCYMQQLL 241
+ +L H N+++L G++ LY+V EYM + L G +
Sbjct: 240 MTQLRHSNLVQLLGVIVEEKG-GLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDV 298
Query: 242 C-GLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRP 300
C +++ +HRD+ N+L+ + + K++DFGL Q+ T ++ W P
Sbjct: 299 CEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD---TGKLPVKWTAP 355
Query: 301 PELLLGATYYGTAVDLWSTGCILAELYA-GK---PIMPGRTEVEQLHKIFKL 348
L + T D+WS G +L E+Y+ G+ P +P + V ++ K +K+
Sbjct: 356 EA--LREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKM 405
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 93/195 (47%), Gaps = 13/195 (6%)
Query: 138 IGQGTYSNVYRARDLDQKK---IVALKKVRFDNLEPESVR--FMAREIHILRRLDHINVI 192
IG+G + +V++ + + VA+K + N +SVR F+ +E +R+ DH +++
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCK--NCTSDSVREKFL-QEALTMRQFDHPHIV 74
Query: 193 KLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRG 251
KL G++T ++++ E +L A + Y QL L + S+
Sbjct: 75 KLIGVITEN---PVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKR 131
Query: 252 VLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGATYYG 311
+HRDI N+L+ +N +K+ DFGL+ + + + + + + PE + +
Sbjct: 132 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE-SINFRRFT 190
Query: 312 TAVDLWSTGCILAEL 326
+A D+W G + E+
Sbjct: 191 SASDVWMFGVCMWEI 205
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 93/195 (47%), Gaps = 13/195 (6%)
Query: 138 IGQGTYSNVYRARDLDQKK---IVALKKVRFDNLEPESVR--FMAREIHILRRLDHINVI 192
IG+G + +V++ + + VA+K + N +SVR F+ +E +R+ DH +++
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCK--NCTSDSVREKFL-QEALTMRQFDHPHIV 74
Query: 193 KLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRG 251
KL G++T ++++ E +L A + Y QL L + S+
Sbjct: 75 KLIGVITEN---PVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKR 131
Query: 252 VLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGATYYG 311
+HRDI N+L+ +N +K+ DFGL+ + + + + + + PE + +
Sbjct: 132 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE-SINFRRFT 190
Query: 312 TAVDLWSTGCILAEL 326
+A D+W G + E+
Sbjct: 191 SASDVWMFGVCMWEI 205
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 95/220 (43%), Gaps = 27/220 (12%)
Query: 138 IGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESV----RFMAREIHILRRL-DHINVI 192
+G+G + V A K + V L+ + R + E+ IL + H+NV+
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 193 KLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSE--------------AQVKCYMQ 238
L G T + L ++ E+ + L+++ K +E + Y
Sbjct: 95 NLLGACT-KPGGPLMVIVEFCK--FGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSF 151
Query: 239 QLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLAS--FYDPDQNQPLTSRVVTL 296
Q+ G++ SR +HRD+ N+L+ ++KI DFGLA + DPD + +R+
Sbjct: 152 QVAKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLK 211
Query: 297 WYRPPELLLGATYYGTAVDLWSTGCILAELYA-GKPIMPG 335
W P + Y D+WS G +L E+++ G PG
Sbjct: 212 WMAPETIF--DRVYTIQSDVWSFGVLLWEIFSLGASPYPG 249
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 101/220 (45%), Gaps = 18/220 (8%)
Query: 135 LDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINVIKL 194
L IG+G + +V K VA+K ++ D + F+A E ++ +L H N+++L
Sbjct: 11 LQTIGKGEFGDVMLGDYRGNK--VAVKCIKND---ATAQAFLA-EASVMTQLRHSNLVQL 64
Query: 195 EGLVTSRMSCSLYLVFEYM-EHDLAGLASHPGLKFSEAQVKCYMQQLLC-GLDHCHSRGV 252
G++ LY+V EYM + L G +C +++
Sbjct: 65 LGVIVEEKG-GLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNF 123
Query: 253 LHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGATYYGT 312
+HRD+ N+L+ + + K++DFGL Q+ T ++ W P L + T
Sbjct: 124 VHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD---TGKLPVKWTAPEA--LREKKFST 178
Query: 313 AVDLWSTGCILAELYA-GK---PIMPGRTEVEQLHKIFKL 348
D+WS G +L E+Y+ G+ P +P + V ++ K +K+
Sbjct: 179 KSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKM 218
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 84/189 (44%), Gaps = 9/189 (4%)
Query: 176 MAREIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKC 235
+ RE+ IL+ + H NVI L + ++ L LA L +E +
Sbjct: 61 IEREVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKESL--TEEEATE 118
Query: 236 YMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGI----LKIADFGLASFYDPDQNQPLTS 291
+++Q+L G+ + HS + H D+K N+++ + + +KI DFGLA + D +
Sbjct: 119 FLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA--HKIDFGNEFKN 176
Query: 292 RVVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGS 351
T + PE ++ G D+WS G I L +G G T+ E L + +
Sbjct: 177 IFGTPEFVAPE-IVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE 235
Query: 352 PSEDYWRKS 360
++Y+ +
Sbjct: 236 FEDEYFSNT 244
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 102/246 (41%), Gaps = 30/246 (12%)
Query: 126 PRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLE----PESVRFMAREIH 181
PR F K +G G + V A K A+ KV L+ + + E+
Sbjct: 44 PRNNLQFGK--TLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELK 101
Query: 182 ILRRL-DHINVIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASH---PGLKFS------- 229
I+ L H N++ L G T + ++ EY + DL PGL++S
Sbjct: 102 IMSHLGQHENIVNLLGACTH--GGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNP 159
Query: 230 EAQVKC-----YMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPD 284
E Q+ + Q+ G+ S+ +HRD+ N+L+ N + KI DFGLA D
Sbjct: 160 EEQLSSRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMND 219
Query: 285 QNQPL--TSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYA-GKPIMPGRTEVEQ 341
N + +R+ W P + Y D+WS G +L E+++ G PG +
Sbjct: 220 SNYIVKGNARLPVKWMAPESIF--DCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSK 277
Query: 342 LHKIFK 347
+K+ K
Sbjct: 278 FYKLVK 283
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 54/107 (50%), Gaps = 7/107 (6%)
Query: 228 FSEAQVKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLI---DNNGILKIADFGLASFYDPD 284
F+E + M+ + + HS + HRD+K NLL + + +LK+ DFG A +
Sbjct: 106 FTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAK--ETT 163
Query: 285 QNQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYAGKP 331
QN L + T +Y PE +LG Y + D+WS G I+ L G P
Sbjct: 164 QN-ALQTPCYTPYYVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGFP 208
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 93/206 (45%), Gaps = 13/206 (6%)
Query: 138 IGQGTYSNVYRARDLDQ--KKI-VALKKVRFDNLEPESVRFMAREIHILRRLDHINVIKL 194
IG+G + VY LD KKI A+K + E +F+ I I++ H NV+ L
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI-IMKDFSHPNVLSL 95
Query: 195 EGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVL 253
G + R S +V YM+H DL + + + + Q+ G+ + S+ +
Sbjct: 96 LG-ICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFV 154
Query: 254 HRDIKGSNLLIDNNGILKIADFGLA-SFYDPDQ---NQPLTSRVVTLWYRPPELLLGATY 309
HRD+ N ++D +K+ADFGLA YD + + +++ W L
Sbjct: 155 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALES--LQTQK 212
Query: 310 YGTAVDLWSTGCILAELYA-GKPIMP 334
+ T D+WS G +L EL G P P
Sbjct: 213 FTTKSDVWSFGVLLWELMTRGAPPYP 238
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 100/230 (43%), Gaps = 26/230 (11%)
Query: 136 DKIGQGTYSNVYRAR-DLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHI-NVIK 193
D IG+G + V +AR D ++ A K + + R A E+ +L +L H N+I
Sbjct: 28 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIIN 87
Query: 194 LEGLVTSRMSCSLYLVFEY---------------MEHDLA-GLASHPGLKFSEAQVKCYM 237
L G R LYL EY +E D A +A+ S Q+ +
Sbjct: 88 LLGACEHR--GYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA 145
Query: 238 QQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLW 297
+ G+D+ + +HR++ N+L+ N + KIADFGL+ + + + R+ W
Sbjct: 146 ADVARGMDYLSQKQFIHRNLAARNILVGENYVAKIADFGLSRGQEVYVKKTM-GRLPVRW 204
Query: 298 YRPPELLLGATYYGTAVDLWSTGCILAELYA--GKPIMPGRTEVEQLHKI 345
L + Y T D+WS G +L E+ + G P G T E K+
Sbjct: 205 MAIES--LNYSVYTTNSDVWSYGVLLWEIVSLGGTPYC-GMTCAELYEKL 251
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 54/107 (50%), Gaps = 7/107 (6%)
Query: 228 FSEAQVKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLI---DNNGILKIADFGLASFYDPD 284
F+E + M+ + + HS + HRD+K NLL + + +LK+ DFG A +
Sbjct: 125 FTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAK--ETT 182
Query: 285 QNQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYAGKP 331
QN L + T +Y PE +LG Y + D+WS G I+ L G P
Sbjct: 183 QN-ALQTPCYTPYYVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGFP 227
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 52/107 (48%), Gaps = 6/107 (5%)
Query: 228 FSEAQVKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDN---NGILKIADFGLASFYDPD 284
F+E + + + + + HS + HRD+K NLL + N ILK+ DFG A +
Sbjct: 158 FTEREASEIXKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK--ETT 215
Query: 285 QNQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYAGKP 331
+ LT+ T +Y PE +LG Y + D WS G I L G P
Sbjct: 216 SHNSLTTPCYTPYYVAPE-VLGPEKYDKSCDXWSLGVIXYILLCGYP 261
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 91/195 (46%), Gaps = 13/195 (6%)
Query: 138 IGQGTYSNVYRARDLDQKK---IVALKKVRFDNLEPESVR--FMAREIHILRRLDHINVI 192
IG+G + +V++ + + VA+K + N +SVR F+ +E +R+ DH +++
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCK--NCTSDSVREKFL-QEALTMRQFDHPHIV 454
Query: 193 KLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRG 251
KL G++T ++++ E +L A + Y QL L + S+
Sbjct: 455 KLIGVITEN---PVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKR 511
Query: 252 VLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGATYYG 311
+HRDI N+L+ +K+ DFGL+ + + + + + + PE + +
Sbjct: 512 FVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE-SINFRRFT 570
Query: 312 TAVDLWSTGCILAEL 326
+A D+W G + E+
Sbjct: 571 SASDVWMFGVCMWEI 585
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 96/210 (45%), Gaps = 14/210 (6%)
Query: 129 ADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDH 188
+D+F + +G+G + VY+ R L +VA+K+++ + + ++F E+ ++ H
Sbjct: 29 SDNFXNKNILGRGGFGKVYKGR-LADGXLVAVKRLKEERTQGGELQFQT-EVEMISMAVH 86
Query: 189 INVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLA------SHPGLKFSEAQ-VKCYMQQLL 241
N+++L G + LV+ YM + S P L + + Q + + L
Sbjct: 87 RNLLRLRGFCMT--PTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGL 144
Query: 242 CGL-DHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRP 300
L DHC + ++HRD+K +N+L+D + DFGLA D + + +
Sbjct: 145 AYLHDHCDPK-IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGXIGHIA 203
Query: 301 PELLLGATYYGTAVDLWSTGCILAELYAGK 330
PE L D++ G +L EL G+
Sbjct: 204 PE-YLSTGKSSEKTDVFGYGVMLLELITGQ 232
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 93/206 (45%), Gaps = 13/206 (6%)
Query: 138 IGQGTYSNVYRARDLDQ--KKI-VALKKVRFDNLEPESVRFMAREIHILRRLDHINVIKL 194
IG+G + VY LD KKI A+K + E +F+ I I++ H NV+ L
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI-IMKDFSHPNVLSL 96
Query: 195 EGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVL 253
G + R S +V YM+H DL + + + + Q+ G+ + S+ +
Sbjct: 97 LG-ICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFV 155
Query: 254 HRDIKGSNLLIDNNGILKIADFGLA-SFYDPDQ---NQPLTSRVVTLWYRPPELLLGATY 309
HRD+ N ++D +K+ADFGLA YD + + +++ W L
Sbjct: 156 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES--LQTQK 213
Query: 310 YGTAVDLWSTGCILAELYA-GKPIMP 334
+ T D+WS G +L EL G P P
Sbjct: 214 FTTKSDVWSFGVLLWELMTRGAPPYP 239
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 93/206 (45%), Gaps = 13/206 (6%)
Query: 138 IGQGTYSNVYRARDLDQ--KKI-VALKKVRFDNLEPESVRFMAREIHILRRLDHINVIKL 194
IG+G + VY LD KKI A+K + E +F+ I I++ H NV+ L
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI-IMKDFSHPNVLSL 94
Query: 195 EGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVL 253
G + R S +V YM+H DL + + + + Q+ G+ + S+ +
Sbjct: 95 LG-ICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFV 153
Query: 254 HRDIKGSNLLIDNNGILKIADFGLA-SFYDPDQ---NQPLTSRVVTLWYRPPELLLGATY 309
HRD+ N ++D +K+ADFGLA YD + + +++ W L
Sbjct: 154 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES--LQTQK 211
Query: 310 YGTAVDLWSTGCILAELYA-GKPIMP 334
+ T D+WS G +L EL G P P
Sbjct: 212 FTTKSDVWSFGVLLWELMTRGAPPYP 237
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 108/236 (45%), Gaps = 36/236 (15%)
Query: 130 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFM-AREIHILRRLDH 188
D+ + L+ IG+G Y VY+ LD++ VA+K F N + F+ + I+ + ++H
Sbjct: 13 DNLKLLELIGRGRYGAVYKG-SLDERP-VAVKVFSFANRQ----NFINEKNIYRVPLMEH 66
Query: 189 INVIKL---EGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLC-GL 244
N+ + + VT+ LV EY + L + L S+ C + + GL
Sbjct: 67 DNIARFIVGDERVTADGRMEYLLVMEYYPN--GSLXKYLSLHTSDWVSSCRLAHSVTRGL 124
Query: 245 DHCHS---RG------VLHRDIKGSNLLIDNNGILKIADFGLAS------FYDP-DQNQP 288
+ H+ RG + HRD+ N+L+ N+G I+DFGL+ P +++
Sbjct: 125 AYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNA 184
Query: 289 LTSRVVTLWYRPPELLLGATYYGTA------VDLWSTGCILAELYA-GKPIMPGRT 337
S V T+ Y PE+L GA VD+++ G I E++ + PG +
Sbjct: 185 AISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGES 240
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 97/224 (43%), Gaps = 44/224 (19%)
Query: 138 IGQGTYSNVYRARDLDQK-----KIVALKKVRFDNLEPESVRFMAREIHILRRLDHINVI 192
+G+G + V +A K VA+K ++ +N P +R + E ++L++++H +VI
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLK-ENASPSELRDLLSEFNVLKQVNHPHVI 89
Query: 193 KLEGLVTSRMSCS----LYLVFEYMEH-DLAGLA----------------------SHPG 225
KL G +CS L L+ EY ++ L G HP
Sbjct: 90 KLYG------ACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPD 143
Query: 226 LK-FSEAQVKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLA-SFYDP 283
+ + + + Q+ G+ + ++HRD+ N+L+ +KI+DFGL+ Y+
Sbjct: 144 ERALTMGDLISFAWQISQGMQYLAEMSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEE 203
Query: 284 DQNQPLT-SRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAEL 326
D + R+ W L Y T D+WS G +L E+
Sbjct: 204 DSXVKRSQGRIPVKWMAIESLF--DHIYTTQSDVWSFGVLLWEI 245
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 93/206 (45%), Gaps = 13/206 (6%)
Query: 138 IGQGTYSNVYRARDLDQ--KKI-VALKKVRFDNLEPESVRFMAREIHILRRLDHINVIKL 194
IG+G + VY LD KKI A+K + E +F+ I I++ H NV+ L
Sbjct: 56 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI-IMKDFSHPNVLSL 114
Query: 195 EGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVL 253
G + R S +V YM+H DL + + + + Q+ G+ + S+ +
Sbjct: 115 LG-ICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFV 173
Query: 254 HRDIKGSNLLIDNNGILKIADFGLA-SFYDPDQ---NQPLTSRVVTLWYRPPELLLGATY 309
HRD+ N ++D +K+ADFGLA YD + + +++ W L
Sbjct: 174 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES--LQTQK 231
Query: 310 YGTAVDLWSTGCILAELYA-GKPIMP 334
+ T D+WS G +L EL G P P
Sbjct: 232 FTTKSDVWSFGVLLWELMTRGAPPYP 257
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 93/206 (45%), Gaps = 13/206 (6%)
Query: 138 IGQGTYSNVYRARDLDQ--KKI-VALKKVRFDNLEPESVRFMAREIHILRRLDHINVIKL 194
IG+G + VY LD KKI A+K + E +F+ I I++ H NV+ L
Sbjct: 33 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI-IMKDFSHPNVLSL 91
Query: 195 EGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVL 253
G + R S +V YM+H DL + + + + Q+ G+ + S+ +
Sbjct: 92 LG-ICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFV 150
Query: 254 HRDIKGSNLLIDNNGILKIADFGLA-SFYDPDQ---NQPLTSRVVTLWYRPPELLLGATY 309
HRD+ N ++D +K+ADFGLA YD + + +++ W L
Sbjct: 151 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES--LQTQK 208
Query: 310 YGTAVDLWSTGCILAELYA-GKPIMP 334
+ T D+WS G +L EL G P P
Sbjct: 209 FTTKSDVWSFGVLLWELMTRGAPPYP 234
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 98/243 (40%), Gaps = 26/243 (10%)
Query: 126 PRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLE----PESVRFMAREIH 181
PR F K +G G + V A K A+ KV L+ + + E+
Sbjct: 44 PRNNLQFGK--TLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELK 101
Query: 182 ILRRL-DHINVIKLEG--------LVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQ 232
I+ L H N++ L G LV + C L+ ++ L + P + +
Sbjct: 102 IMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLL-NFLRRKSRVLETDPAFAIANST 160
Query: 233 VKC-----YMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQ 287
+ + Q+ G+ S+ +HRD+ N+L+ N + KI DFGLA D N
Sbjct: 161 LSTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNY 220
Query: 288 PL--TSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYA-GKPIMPGRTEVEQLHK 344
+ +R+ W P + Y D+WS G +L E+++ G PG + +K
Sbjct: 221 IVKGNARLPVKWMAPESIF--DCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYK 278
Query: 345 IFK 347
+ K
Sbjct: 279 LVK 281
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 93/206 (45%), Gaps = 13/206 (6%)
Query: 138 IGQGTYSNVYRARDLDQ--KKI-VALKKVRFDNLEPESVRFMAREIHILRRLDHINVIKL 194
IG+G + VY LD KKI A+K + E +F+ I I++ H NV+ L
Sbjct: 30 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI-IMKDFSHPNVLSL 88
Query: 195 EGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVL 253
G + R S +V YM+H DL + + + + Q+ G+ + S+ +
Sbjct: 89 LG-ICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFV 147
Query: 254 HRDIKGSNLLIDNNGILKIADFGLA-SFYDPDQ---NQPLTSRVVTLWYRPPELLLGATY 309
HRD+ N ++D +K+ADFGLA YD + + +++ W L
Sbjct: 148 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES--LQTQK 205
Query: 310 YGTAVDLWSTGCILAELYA-GKPIMP 334
+ T D+WS G +L EL G P P
Sbjct: 206 FTTKSDVWSFGVLLWELMTRGAPPYP 231
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 105/222 (47%), Gaps = 44/222 (19%)
Query: 138 IGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLD-HINVIKL-- 194
+ +G ++ VY A+D+ + ALK++ + E E R + +E+ +++L H N+++
Sbjct: 36 LAEGGFAFVYEAQDVGSGREYALKRLLSN--EEEKNRAIIQEVCFMKKLSGHPNIVQFCS 93
Query: 195 --------------EGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQL 240
E L+ + + C LV E+++ G + +K + Q
Sbjct: 94 AASIGKEESDTGQAEFLLLTEL-CKGQLV-EFLKK-----MESRGPLSCDTVLKIFYQT- 145
Query: 241 LC-GLDHCHSRG--VLHRDIKGSNLLIDNNGILKIADFGLASFYD--PD-----QNQPLT 290
C + H H + ++HRD+K NLL+ N G +K+ DFG A+ PD Q + L
Sbjct: 146 -CRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALV 204
Query: 291 ----SRVVTLWYRPPELL-LGATY-YGTAVDLWSTGCILAEL 326
+R T YR PE++ L + + G D+W+ GCIL L
Sbjct: 205 EEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLL 246
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 94/212 (44%), Gaps = 21/212 (9%)
Query: 129 ADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLD- 187
++F+ IG G + VY+ D K VALK+ PES + + + L
Sbjct: 38 TNNFDHKFLIGHGVFGKVYKGVLRDGAK-VALKR-----RTPESSQGIEEFETEIETLSF 91
Query: 188 --HINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASH------PGLKFSEAQVKCYMQQ 239
H +++ L G R + L+++YME+ L H P + S Q
Sbjct: 92 CRHPHLVSLIGFCDERNE--MILIYKYMEN--GNLKRHLYGSDLPTMSMSWEQRLEICIG 147
Query: 240 LLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLA-SFYDPDQNQPLTSRVVTLWY 298
GL + H+R ++HRD+K N+L+D N + KI DFG++ + DQ TL Y
Sbjct: 148 AARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGY 207
Query: 299 RPPELLLGATYYGTAVDLWSTGCILAELYAGK 330
PE + + D++S G +L E+ +
Sbjct: 208 IDPEYFIKGRLTEKS-DVYSFGVVLFEVLCAR 238
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 94/222 (42%), Gaps = 29/222 (13%)
Query: 138 IGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESV----RFMAREIHILRRL-DHINVI 192
+G+G + V A K + V L+ + R + E+ IL + H+NV+
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 193 KLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSE----------------AQVKCY 236
L G T + L ++ E+ + L+++ K +E + Y
Sbjct: 97 NLLGACT-KPGGPLMVIVEFCK--FGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXY 153
Query: 237 MQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLAS--FYDPDQNQPLTSRVV 294
Q+ G++ SR +HRD+ N+L+ ++KI DFGLA DPD + +R+
Sbjct: 154 SFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLP 213
Query: 295 TLWYRPPELLLGATYYGTAVDLWSTGCILAELYA-GKPIMPG 335
W P + Y D+WS G +L E+++ G PG
Sbjct: 214 LKWMAPETIF--DRVYTIQSDVWSFGVLLWEIFSLGASPYPG 253
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 90/209 (43%), Gaps = 27/209 (12%)
Query: 132 FEKLDKIGQGTYSNVYRARDL---DQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDH 188
KL +G G + V++ + + KI KV D +S + + + + LDH
Sbjct: 33 LRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDH 92
Query: 189 INVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASH---------PGLKFSEAQVKCYMQQ 239
++++L GL SL LV +Y+ L L H P L + + Q
Sbjct: 93 AHIVRLLGLCPG---SSLQLVTQYLP--LGSLLDHVRQHRGALGPQLLLN------WGVQ 141
Query: 240 LLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVT--LW 297
+ G+ + G++HR++ N+L+ + +++ADFG+A PD Q L S T W
Sbjct: 142 IAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKW 201
Query: 298 YRPPELLLGATYYGTAVDLWSTGCILAEL 326
+ G Y D+WS G + EL
Sbjct: 202 MALESIHFGK--YTHQSDVWSYGVTVWEL 228
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 93/206 (45%), Gaps = 13/206 (6%)
Query: 138 IGQGTYSNVYRARDLDQ--KKI-VALKKVRFDNLEPESVRFMAREIHILRRLDHINVIKL 194
IG+G + VY LD KKI A+K + E +F+ I I++ H NV+ L
Sbjct: 35 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI-IMKDFSHPNVLSL 93
Query: 195 EGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVL 253
G + R S +V YM+H DL + + + + Q+ G+ + S+ +
Sbjct: 94 LG-ICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFV 152
Query: 254 HRDIKGSNLLIDNNGILKIADFGLA-SFYDPDQ---NQPLTSRVVTLWYRPPELLLGATY 309
HRD+ N ++D +K+ADFGLA YD + + +++ W L
Sbjct: 153 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES--LQTQK 210
Query: 310 YGTAVDLWSTGCILAELYA-GKPIMP 334
+ T D+WS G +L EL G P P
Sbjct: 211 FTTKSDVWSFGVLLWELMTRGAPPYP 236
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 93/206 (45%), Gaps = 13/206 (6%)
Query: 138 IGQGTYSNVYRARDLDQ--KKI-VALKKVRFDNLEPESVRFMAREIHILRRLDHINVIKL 194
IG+G + VY LD KKI A+K + E +F+ I I++ H NV+ L
Sbjct: 57 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI-IMKDFSHPNVLSL 115
Query: 195 EGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVL 253
G + R S +V YM+H DL + + + + Q+ G+ + S+ +
Sbjct: 116 LG-ICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFV 174
Query: 254 HRDIKGSNLLIDNNGILKIADFGLA-SFYDPDQ---NQPLTSRVVTLWYRPPELLLGATY 309
HRD+ N ++D +K+ADFGLA YD + + +++ W L
Sbjct: 175 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES--LQTQK 232
Query: 310 YGTAVDLWSTGCILAELYA-GKPIMP 334
+ T D+WS G +L EL G P P
Sbjct: 233 FTTKSDVWSFGVLLWELMTRGAPPYP 258
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 93/206 (45%), Gaps = 13/206 (6%)
Query: 138 IGQGTYSNVYRARDLDQ--KKI-VALKKVRFDNLEPESVRFMAREIHILRRLDHINVIKL 194
IG+G + VY LD KKI A+K + E +F+ I I++ H NV+ L
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI-IMKDFSHPNVLSL 95
Query: 195 EGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVL 253
G + R S +V YM+H DL + + + + Q+ G+ + S+ +
Sbjct: 96 LG-ICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFV 154
Query: 254 HRDIKGSNLLIDNNGILKIADFGLA-SFYDPDQ---NQPLTSRVVTLWYRPPELLLGATY 309
HRD+ N ++D +K+ADFGLA YD + + +++ W L
Sbjct: 155 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES--LQTQK 212
Query: 310 YGTAVDLWSTGCILAELYA-GKPIMP 334
+ T D+WS G +L EL G P P
Sbjct: 213 FTTKSDVWSFGVLLWELMTRGAPPYP 238
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 91/195 (46%), Gaps = 13/195 (6%)
Query: 138 IGQGTYSNVYRARDLDQKK---IVALKKVRFDNLEPESVR--FMAREIHILRRLDHINVI 192
IG+G + +V++ + + VA+K + N +SVR F+ +E +R+ DH +++
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCK--NCTSDSVREKFL-QEALTMRQFDHPHIV 74
Query: 193 KLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRG 251
KL G++T ++++ E +L A + Y QL L + S+
Sbjct: 75 KLIGVITEN---PVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKR 131
Query: 252 VLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGATYYG 311
+HRDI N+L+ +K+ DFGL+ + + + + + + PE + +
Sbjct: 132 FVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE-SINFRRFT 190
Query: 312 TAVDLWSTGCILAEL 326
+A D+W G + E+
Sbjct: 191 SASDVWMFGVCMWEI 205
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 97/224 (43%), Gaps = 44/224 (19%)
Query: 138 IGQGTYSNVYRARDLDQK-----KIVALKKVRFDNLEPESVRFMAREIHILRRLDHINVI 192
+G+G + V +A K VA+K ++ +N P +R + E ++L++++H +VI
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLK-ENASPSELRDLLSEFNVLKQVNHPHVI 89
Query: 193 KLEGLVTSRMSCS----LYLVFEYMEH-DLAGLA----------------------SHPG 225
KL G +CS L L+ EY ++ L G HP
Sbjct: 90 KLYG------ACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPD 143
Query: 226 LK-FSEAQVKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLA-SFYDP 283
+ + + + Q+ G+ + ++HRD+ N+L+ +KI+DFGL+ Y+
Sbjct: 144 ERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEE 203
Query: 284 DQNQPLT-SRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAEL 326
D + R+ W L Y T D+WS G +L E+
Sbjct: 204 DSXVKRSQGRIPVKWMAIESLF--DHIYTTQSDVWSFGVLLWEI 245
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 93/206 (45%), Gaps = 13/206 (6%)
Query: 138 IGQGTYSNVYRARDLDQ--KKI-VALKKVRFDNLEPESVRFMAREIHILRRLDHINVIKL 194
IG+G + VY LD KKI A+K + E +F+ I I++ H NV+ L
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI-IMKDFSHPNVLSL 96
Query: 195 EGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVL 253
G + R S +V YM+H DL + + + + Q+ G+ + S+ +
Sbjct: 97 LG-ICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFV 155
Query: 254 HRDIKGSNLLIDNNGILKIADFGLA-SFYDPDQ---NQPLTSRVVTLWYRPPELLLGATY 309
HRD+ N ++D +K+ADFGLA YD + + +++ W L
Sbjct: 156 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES--LQTQK 213
Query: 310 YGTAVDLWSTGCILAELYA-GKPIMP 334
+ T D+WS G +L EL G P P
Sbjct: 214 FTTKSDVWSFGVLLWELMTRGAPPYP 239
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 92/206 (44%), Gaps = 13/206 (6%)
Query: 138 IGQGTYSNVYRARDLDQ--KKI-VALKKVRFDNLEPESVRFMAREIHILRRLDHINVIKL 194
IG+G + VY LD KKI A+K + E +F+ I I++ H NV+ L
Sbjct: 97 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI-IMKDFSHPNVLSL 155
Query: 195 EGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVL 253
G + R S +V YM+H DL + + + + Q+ G+ S+ +
Sbjct: 156 LG-ICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFV 214
Query: 254 HRDIKGSNLLIDNNGILKIADFGLA-SFYDPD---QNQPLTSRVVTLWYRPPELLLGATY 309
HRD+ N ++D +K+ADFGLA YD + + +++ W L
Sbjct: 215 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES--LQTQK 272
Query: 310 YGTAVDLWSTGCILAELYA-GKPIMP 334
+ T D+WS G +L EL G P P
Sbjct: 273 FTTKSDVWSFGVLLWELMTRGAPPYP 298
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 54/99 (54%), Gaps = 12/99 (12%)
Query: 239 QLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQ-----PLTS-- 291
Q+ ++ HS+G++HRD+K SN+ + ++K+ DFGL + D D+ + P+ +
Sbjct: 172 QIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYA 231
Query: 292 ----RVVTLWYRPPELLLGATYYGTAVDLWSTGCILAEL 326
+V T Y PE + G Y VD++S G IL EL
Sbjct: 232 THXGQVGTKLYMSPEQIHGNN-YSHKVDIFSLGLILFEL 269
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 127 RRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRL 186
R FE + +G+G + V+ A++ A+K++R N E + M RE+ L +L
Sbjct: 3 RYLTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVM-REVKALAKL 61
Query: 187 DHINVIK 193
+H +++
Sbjct: 62 EHPGIVR 68
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 97/243 (39%), Gaps = 26/243 (10%)
Query: 126 PRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLE----PESVRFMAREIH 181
PR F K +G G + V A K A+ KV L+ + + E+
Sbjct: 44 PRNNLQFGK--TLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELK 101
Query: 182 ILRRL-DHINVIKLEG--------LVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQ 232
I+ L H N++ L G LV + C L+ ++ L + P + +
Sbjct: 102 IMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLL-NFLRRKSRVLETDPAFAIANST 160
Query: 233 VKC-----YMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQ 287
+ Q+ G+ S+ +HRD+ N+L+ N + KI DFGLA D N
Sbjct: 161 ASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNY 220
Query: 288 PL--TSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYA-GKPIMPGRTEVEQLHK 344
+ +R+ W P + Y D+WS G +L E+++ G PG + +K
Sbjct: 221 IVKGNARLPVKWMAPESIF--DCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYK 278
Query: 345 IFK 347
+ K
Sbjct: 279 LVK 281
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 103/247 (41%), Gaps = 51/247 (20%)
Query: 129 ADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDH 188
A+ + L +IG+G Y +V + +I+A+K++R E E + + ++R D
Sbjct: 21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDC 80
Query: 189 INVIKLEG---------LVTSRMSCSLYLVFEYMEHDLAGLASHPGL-KFSEAQVKCYMQ 238
+++ G + MS S ++Y+ L + L K + A VK
Sbjct: 81 PYIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVK---- 136
Query: 239 QLLCGLDHC-HSRGVLHRDIKGSNLLIDNNGILKIADFGLAS----------------FY 281
L+H + ++HRDIK SN+L+D +G +K+ DFG++ +
Sbjct: 137 ----ALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDAGCRPYM 192
Query: 282 DPDQNQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEV-E 340
P++ P SR Y D+WS G L EL G+ P V +
Sbjct: 193 APERIDPSASR---------------QGYDVRSDVWSLGITLYELATGRFPYPKWNSVFD 237
Query: 341 QLHKIFK 347
QL ++ K
Sbjct: 238 QLTQVVK 244
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 90/209 (43%), Gaps = 27/209 (12%)
Query: 132 FEKLDKIGQGTYSNVYRARDL---DQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDH 188
KL +G G + V++ + + KI KV D +S + + + + LDH
Sbjct: 15 LRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDH 74
Query: 189 INVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASH---------PGLKFSEAQVKCYMQQ 239
++++L GL SL LV +Y+ L L H P L + + Q
Sbjct: 75 AHIVRLLGLCPG---SSLQLVTQYLP--LGSLLDHVRQHRGALGPQLLLN------WGVQ 123
Query: 240 LLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVT--LW 297
+ G+ + G++HR++ N+L+ + +++ADFG+A PD Q L S T W
Sbjct: 124 IAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKW 183
Query: 298 YRPPELLLGATYYGTAVDLWSTGCILAEL 326
+ G Y D+WS G + EL
Sbjct: 184 MALESIHFGK--YTHQSDVWSYGVTVWEL 210
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 97/215 (45%), Gaps = 34/215 (15%)
Query: 135 LDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINVIKL 194
L+ +G+G Y V+R Q + VA+K F + + +S F E++ L H N++
Sbjct: 13 LECVGKGRYGEVWRGSW--QGENVAVKI--FSSRDEKS-WFRETELYNTVMLRHENIL-- 65
Query: 195 EGLVTSRM-----SCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCY--MQQLLCGLDHC 247
G + S M S L+L+ Y H++ L + L + V C + + GL H
Sbjct: 66 -GFIASDMTSRHSSTQLWLITHY--HEMGSLYDYLQLTTLDT-VSCLRIVLSIASGLAHL 121
Query: 248 HSR--------GVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTS---RVVTL 296
H + HRD+K N+L+ NG IAD GLA + NQ RV T
Sbjct: 122 HIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTK 181
Query: 297 WYRPPELL---LGATYYGTA--VDLWSTGCILAEL 326
Y PE+L + + + VD+W+ G +L E+
Sbjct: 182 RYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 94/238 (39%), Gaps = 20/238 (8%)
Query: 126 PRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLE----PESVRFMAREIH 181
PR F K +G G + V A K A+ KV L+ + + E+
Sbjct: 44 PRNNLQFGK--TLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELK 101
Query: 182 ILRRL-DHINVIKLEG--------LVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQ 232
I+ L H N++ L G LV + C L+ A L G
Sbjct: 102 IMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRD 161
Query: 233 VKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPL--T 290
+ + Q+ G+ S+ +HRD+ N+L+ N + KI DFGLA D N +
Sbjct: 162 LLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGN 221
Query: 291 SRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYA-GKPIMPGRTEVEQLHKIFK 347
+R+ W P + Y D+WS G +L E+++ G PG + +K+ K
Sbjct: 222 ARLPVKWMAPESIF--DCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVK 277
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 87/193 (45%), Gaps = 9/193 (4%)
Query: 138 IGQGTYSNVYRARDLDQK--KI-VALKKVRFDNLEPESVRFMAREIHILRRLDHINVIKL 194
+G+G + VY + K KI VA+K + D +FM+ + I++ LDH +++KL
Sbjct: 32 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAV-IMKNLDHPHIVKL 90
Query: 195 EGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVLH 254
G++ + + ++ Y E L + Y Q+ + + S +H
Sbjct: 91 IGIIEEEPTWIIMELYPYGE--LGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVH 148
Query: 255 RDIKGSNLLIDNNGILKIADFGLASFY-DPDQNQPLTSRVVTLWYRPPELLLGATYYGTA 313
RDI N+L+ + +K+ DFGL+ + D D + +R+ W P + + TA
Sbjct: 149 RDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPES--INFRRFTTA 206
Query: 314 VDLWSTGCILAEL 326
D+W + E+
Sbjct: 207 SDVWMFAVCMWEI 219
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 98/221 (44%), Gaps = 34/221 (15%)
Query: 129 ADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDH 188
A L+ +G+G Y V+R Q + VA+K F + + +S F E++ L H
Sbjct: 7 AHQITLLECVGKGRYGEVWRGSW--QGENVAVKI--FSSRDEKS-WFRETELYNTVMLRH 61
Query: 189 INVIKLEGLVTSRM-----SCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCY--MQQLL 241
N++ G + S M S L+L+ Y H++ L + L + V C + +
Sbjct: 62 ENIL---GFIASDMTSRHSSTQLWLITHY--HEMGSLYDYLQLTTLDT-VSCLRIVLSIA 115
Query: 242 CGLDHCHSR--------GVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTS-- 291
GL H H + HRD+K N+L+ NG IAD GLA + NQ
Sbjct: 116 SGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNN 175
Query: 292 -RVVTLWYRPPELL---LGATYYGTA--VDLWSTGCILAEL 326
RV T Y PE+L + + + VD+W+ G +L E+
Sbjct: 176 PRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 88/206 (42%), Gaps = 11/206 (5%)
Query: 128 RADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLD 187
+AD E + ++G+G Y V + R + +I A+K++R E R + R +D
Sbjct: 32 KADDLEPIXELGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLXDLDISXRTVD 91
Query: 188 HINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASH---PGLKFSEAQVKCYMQQLLCGL 244
+ G + +++ E + L G E + ++ L
Sbjct: 92 CPFTVTFYGALFRE--GDVWICXELXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKAL 149
Query: 245 DHCHSR-GVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPEL 303
+H HS+ V+HRD+K SN+LI+ G +K DFG++ + D + + + Y PE
Sbjct: 150 EHLHSKLSVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDAGCKP--YXAPER 207
Query: 304 L---LGATYYGTAVDLWSTGCILAEL 326
+ L Y D+WS G EL
Sbjct: 208 INPELNQKGYSVKSDIWSLGITXIEL 233
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 97/215 (45%), Gaps = 34/215 (15%)
Query: 135 LDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINVIKL 194
L+ +G+G Y V+R Q + VA+K F + + +S F E++ L H N++
Sbjct: 42 LECVGKGRYGEVWRGSW--QGENVAVKI--FSSRDEKS-WFRETELYNTVMLRHENIL-- 94
Query: 195 EGLVTSRM-----SCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCY--MQQLLCGLDHC 247
G + S M S L+L+ Y H++ L + L + V C + + GL H
Sbjct: 95 -GFIASDMTSRHSSTQLWLITHY--HEMGSLYDYLQLTTLDT-VSCLRIVLSIASGLAHL 150
Query: 248 HSR--------GVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTS---RVVTL 296
H + HRD+K N+L+ NG IAD GLA + NQ RV T
Sbjct: 151 HIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTK 210
Query: 297 WYRPPELL---LGATYYGTA--VDLWSTGCILAEL 326
Y PE+L + + + VD+W+ G +L E+
Sbjct: 211 RYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 97/224 (43%), Gaps = 44/224 (19%)
Query: 138 IGQGTYSNVYRARDLDQK-----KIVALKKVRFDNLEPESVRFMAREIHILRRLDHINVI 192
+G+G + V +A K VA+K ++ +N P +R + E ++L++++H +VI
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLK-ENASPSELRDLLSEFNVLKQVNHPHVI 89
Query: 193 KLEGLVTSRMSCS----LYLVFEYMEH-DLAGLA----------------------SHPG 225
KL G +CS L L+ EY ++ L G HP
Sbjct: 90 KLYG------ACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPD 143
Query: 226 LK-FSEAQVKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLA-SFYDP 283
+ + + + Q+ G+ + ++HRD+ N+L+ +KI+DFGL+ Y+
Sbjct: 144 ERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEE 203
Query: 284 DQNQPLT-SRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAEL 326
D + R+ W L Y T D+WS G +L E+
Sbjct: 204 DSYVKRSQGRIPVKWMAIESLF--DHIYTTQSDVWSFGVLLWEI 245
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 95/213 (44%), Gaps = 23/213 (10%)
Query: 129 ADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLD- 187
++F+ IG G + VY+ D K VALK+ PES + + + L
Sbjct: 38 TNNFDHKFLIGHGVFGKVYKGVLRDGAK-VALKR-----RTPESSQGIEEFETEIETLSF 91
Query: 188 --HINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASH------PGLKFSEAQVKCYMQQ 239
H +++ L G R + L+++YME+ L H P + S Q
Sbjct: 92 CRHPHLVSLIGFCDERNE--MILIYKYMEN--GNLKRHLYGSDLPTMSMSWEQRLEICIG 147
Query: 240 LLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVV--TLW 297
GL + H+R ++HRD+K N+L+D N + KI DFG++ + Q VV TL
Sbjct: 148 AARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISK-KGTELGQTHLXXVVKGTLG 206
Query: 298 YRPPELLLGATYYGTAVDLWSTGCILAELYAGK 330
Y PE + + D++S G +L E+ +
Sbjct: 207 YIDPEYFIKGRLTEKS-DVYSFGVVLFEVLCAR 238
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 87/193 (45%), Gaps = 9/193 (4%)
Query: 138 IGQGTYSNVYRARDLDQK--KI-VALKKVRFDNLEPESVRFMAREIHILRRLDHINVIKL 194
+G+G + VY + K KI VA+K + D +FM+ + I++ LDH +++KL
Sbjct: 20 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAV-IMKNLDHPHIVKL 78
Query: 195 EGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVLH 254
G++ + + ++ Y E L + Y Q+ + + S +H
Sbjct: 79 IGIIEEEPTWIIMELYPYGE--LGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVH 136
Query: 255 RDIKGSNLLIDNNGILKIADFGLASFY-DPDQNQPLTSRVVTLWYRPPELLLGATYYGTA 313
RDI N+L+ + +K+ DFGL+ + D D + +R+ W P + + TA
Sbjct: 137 RDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPES--INFRRFTTA 194
Query: 314 VDLWSTGCILAEL 326
D+W + E+
Sbjct: 195 SDVWMFAVCMWEI 207
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 99/217 (45%), Gaps = 28/217 (12%)
Query: 135 LDKIGQGTYSNVYRARDL-----DQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHI 189
++++G+ + VY+ +Q + VA+K ++ D E E + RL H
Sbjct: 31 MEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLK-DKAEGPLREEFRHEAMLRARLQHP 89
Query: 190 NVIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLA------SHPGLKFSEAQVKCYMQ---- 238
NV+ L G+VT S+ +F Y H DL S G + VK ++
Sbjct: 90 NVVCLLGVVTKDQPLSM--IFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDF 147
Query: 239 -----QLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLA-SFYDPDQNQPLTSR 292
Q+ G+++ S V+H+D+ N+L+ + +KI+D GL Y D + L +
Sbjct: 148 VHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNS 207
Query: 293 VVTL-WYRPPELLLGATYYGTAVDLWSTGCILAELYA 328
++ + W P ++ G + D+WS G +L E+++
Sbjct: 208 LLPIRWMAPEAIMYGK--FSIDSDIWSYGVVLWEVFS 242
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 92/206 (44%), Gaps = 13/206 (6%)
Query: 138 IGQGTYSNVYRARDLDQ--KKI-VALKKVRFDNLEPESVRFMAREIHILRRLDHINVIKL 194
IG+G + VY LD KKI A+K + E +F+ I I++ H NV+ L
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI-IMKDFSHPNVLSL 97
Query: 195 EGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVL 253
G + R S +V YM+H DL + + + + Q+ G+ S+ +
Sbjct: 98 LG-ICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFV 156
Query: 254 HRDIKGSNLLIDNNGILKIADFGLA-SFYDPD---QNQPLTSRVVTLWYRPPELLLGATY 309
HRD+ N ++D +K+ADFGLA YD + + +++ W L
Sbjct: 157 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES--LQTQK 214
Query: 310 YGTAVDLWSTGCILAELYA-GKPIMP 334
+ T D+WS G +L EL G P P
Sbjct: 215 FTTKSDVWSFGVLLWELMTRGAPPYP 240
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 93/205 (45%), Gaps = 19/205 (9%)
Query: 138 IGQGTYSNVYRARDLDQKK----IVALKKVRFDNLEPESVRFMAREIHILRRLDHINVIK 193
+G+G + +V R L Q+ VA+K ++ D + + RE ++ DH +V K
Sbjct: 31 LGKGEFGSV-REAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAK 89
Query: 194 LEGL-VTSRMSCSL---YLVFEYMEH-DLAG--LASHPG---LKFSEAQVKCYMQQLLCG 243
L G+ + SR L ++ +M+H DL LAS G + +M + CG
Sbjct: 90 LVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACG 149
Query: 244 LDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLA-SFYDPD-QNQPLTSRVVTLWYRPP 301
+++ SR +HRD+ N ++ + + +ADFGL+ Y D Q S++ W
Sbjct: 150 MEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALE 209
Query: 302 ELLLGATYYGTAVDLWSTGCILAEL 326
L Y D+W+ G + E+
Sbjct: 210 S--LADNLYTVHSDVWAFGVTMWEI 232
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 94/238 (39%), Gaps = 20/238 (8%)
Query: 126 PRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLE----PESVRFMAREIH 181
PR F K +G G + V A K A+ KV L+ + + E+
Sbjct: 36 PRNNLQFGK--TLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELK 93
Query: 182 ILRRL-DHINVIKLEG--------LVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQ 232
I+ L H N++ L G LV + C L+ A L G
Sbjct: 94 IMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRD 153
Query: 233 VKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPL--T 290
+ + Q+ G+ S+ +HRD+ N+L+ N + KI DFGLA D N +
Sbjct: 154 LLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGN 213
Query: 291 SRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYA-GKPIMPGRTEVEQLHKIFK 347
+R+ W P + Y D+WS G +L E+++ G PG + +K+ K
Sbjct: 214 ARLPVKWMAPESIF--DCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVK 269
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 92/206 (44%), Gaps = 13/206 (6%)
Query: 138 IGQGTYSNVYRARDLDQ--KKI-VALKKVRFDNLEPESVRFMAREIHILRRLDHINVIKL 194
IG+G + VY LD KKI A+K + E +F+ I I++ H NV+ L
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI-IMKDFSHPNVLSL 96
Query: 195 EGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVL 253
G + R S +V YM+H DL + + + + Q+ G+ S+ +
Sbjct: 97 LG-ICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFV 155
Query: 254 HRDIKGSNLLIDNNGILKIADFGLA-SFYDPD---QNQPLTSRVVTLWYRPPELLLGATY 309
HRD+ N ++D +K+ADFGLA YD + + +++ W L
Sbjct: 156 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES--LQTQK 213
Query: 310 YGTAVDLWSTGCILAELYA-GKPIMP 334
+ T D+WS G +L EL G P P
Sbjct: 214 FTTKSDVWSFGVLLWELMTRGAPPYP 239
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 92/206 (44%), Gaps = 13/206 (6%)
Query: 138 IGQGTYSNVYRARDLDQ--KKI-VALKKVRFDNLEPESVRFMAREIHILRRLDHINVIKL 194
IG+G + VY LD KKI A+K + E +F+ I I++ H NV+ L
Sbjct: 43 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI-IMKDFSHPNVLSL 101
Query: 195 EGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVL 253
G + R S +V YM+H DL + + + + Q+ G+ S+ +
Sbjct: 102 LG-ICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFV 160
Query: 254 HRDIKGSNLLIDNNGILKIADFGLA-SFYDPD---QNQPLTSRVVTLWYRPPELLLGATY 309
HRD+ N ++D +K+ADFGLA YD + + +++ W L
Sbjct: 161 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES--LQTQK 218
Query: 310 YGTAVDLWSTGCILAELYA-GKPIMP 334
+ T D+WS G +L EL G P P
Sbjct: 219 FTTKSDVWSFGVLLWELMTRGAPPYP 244
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 87/193 (45%), Gaps = 9/193 (4%)
Query: 138 IGQGTYSNVYRARDLDQK--KI-VALKKVRFDNLEPESVRFMAREIHILRRLDHINVIKL 194
+G+G + VY + K KI VA+K + D +FM+ + I++ LDH +++KL
Sbjct: 16 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAV-IMKNLDHPHIVKL 74
Query: 195 EGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVLH 254
G++ + + ++ Y E L + Y Q+ + + S +H
Sbjct: 75 IGIIEEEPTWIIMELYPYGE--LGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVH 132
Query: 255 RDIKGSNLLIDNNGILKIADFGLASFY-DPDQNQPLTSRVVTLWYRPPELLLGATYYGTA 313
RDI N+L+ + +K+ DFGL+ + D D + +R+ W P + + TA
Sbjct: 133 RDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPES--INFRRFTTA 190
Query: 314 VDLWSTGCILAEL 326
D+W + E+
Sbjct: 191 SDVWMFAVCMWEI 203
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 99/217 (45%), Gaps = 28/217 (12%)
Query: 135 LDKIGQGTYSNVYRARDL-----DQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHI 189
++++G+ + VY+ +Q + VA+K ++ D E E + RL H
Sbjct: 14 MEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLK-DKAEGPLREEFRHEAMLRARLQHP 72
Query: 190 NVIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLA------SHPGLKFSEAQVKCYMQ---- 238
NV+ L G+VT S+ +F Y H DL S G + VK ++
Sbjct: 73 NVVCLLGVVTKDQPLSM--IFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDF 130
Query: 239 -----QLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLA-SFYDPDQNQPLTSR 292
Q+ G+++ S V+H+D+ N+L+ + +KI+D GL Y D + L +
Sbjct: 131 VHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNS 190
Query: 293 VVTL-WYRPPELLLGATYYGTAVDLWSTGCILAELYA 328
++ + W P ++ G + D+WS G +L E+++
Sbjct: 191 LLPIRWMAPEAIMYGK--FSIDSDIWSYGVVLWEVFS 225
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 92/206 (44%), Gaps = 13/206 (6%)
Query: 138 IGQGTYSNVYRARDLDQ--KKI-VALKKVRFDNLEPESVRFMAREIHILRRLDHINVIKL 194
IG+G + VY LD KKI A+K + E +F+ I I++ H NV+ L
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI-IMKDFSHPNVLSL 96
Query: 195 EGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVL 253
G + R S +V YM+H DL + + + + Q+ G+ S+ +
Sbjct: 97 LG-ICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFV 155
Query: 254 HRDIKGSNLLIDNNGILKIADFGLA-SFYDPD---QNQPLTSRVVTLWYRPPELLLGATY 309
HRD+ N ++D +K+ADFGLA YD + + +++ W L
Sbjct: 156 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES--LQTQK 213
Query: 310 YGTAVDLWSTGCILAELYA-GKPIMP 334
+ T D+WS G +L EL G P P
Sbjct: 214 FTTKSDVWSFGVLLWELMTRGAPPYP 239
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 92/206 (44%), Gaps = 13/206 (6%)
Query: 138 IGQGTYSNVYRARDLDQ--KKI-VALKKVRFDNLEPESVRFMAREIHILRRLDHINVIKL 194
IG+G + VY LD KKI A+K + E +F+ I I++ H NV+ L
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI-IMKDFSHPNVLSL 94
Query: 195 EGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVL 253
G + R S +V YM+H DL + + + + Q+ G+ S+ +
Sbjct: 95 LG-ICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFV 153
Query: 254 HRDIKGSNLLIDNNGILKIADFGLA-SFYDPD---QNQPLTSRVVTLWYRPPELLLGATY 309
HRD+ N ++D +K+ADFGLA YD + + +++ W L
Sbjct: 154 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES--LQTQK 211
Query: 310 YGTAVDLWSTGCILAELYA-GKPIMP 334
+ T D+WS G +L EL G P P
Sbjct: 212 FTTKSDVWSFGVLLWELMTRGAPPYP 237
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 91/219 (41%), Gaps = 33/219 (15%)
Query: 136 DKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINVIKLE 195
+ +G+G + V+R + KK K V+ + V+ +EI IL H N++ L
Sbjct: 11 EDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVK---KEISILNIARHRNILHLH 67
Query: 196 GLVTSRMSCSLYLVFEYME-HDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVLH 254
S L ++FE++ D+ + + +E ++ Y+ Q+ L HS + H
Sbjct: 68 ESFESMEE--LVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGH 125
Query: 255 RDIKGSNLLIDN--NGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGATYYG- 311
DI+ N++ + +KI +FG A P N L + PE YY
Sbjct: 126 FDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDN-------FRLLFTAPE------YYAP 172
Query: 312 ---------TAVDLWSTGCILAELYAGKPIMPGRTEVEQ 341
TA D+WS G ++ L +G I P E Q
Sbjct: 173 EVHQHDVVSTATDMWSLGTLVYVLLSG--INPFLAETNQ 209
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 119/304 (39%), Gaps = 59/304 (19%)
Query: 131 SFEKLDKIGQG-----TYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRR 185
SF D +G G Y ++ RD+ K+I+ PE F RE+ +LR
Sbjct: 25 SFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRIL-----------PECFSFADREVQLLRE 73
Query: 186 LD-HINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGL 244
D H NVI+ T + Y+ E L + +QQ GL
Sbjct: 74 SDEHPNVIRY--FCTEKDRQFQYIAIELCAATLQEYVEQKDFAHLGLEPITLLQQTTSGL 131
Query: 245 DHCHSRGVLHRDIKGSNLLI---DNNGILK--IADFGLASFYDPDQNQPLTSRVV--TLW 297
H HS ++HRD+K N+LI + +G +K I+DFGL ++ V T
Sbjct: 132 AHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEG 191
Query: 298 YRPPELLL-----GATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSP 352
+ PE+L TY VD++S GC+ + + G++ Q + L G+
Sbjct: 192 WIAPEMLSEDCKENPTY---TVDIFSAGCVFYYVISEGSHPFGKSLQRQAN---ILLGAC 245
Query: 353 SEDYWRKSKLPHATIFKPQQPYKRCVAETFKDFPAPALALMETLLSIDPADRGSAASALR 412
S D K H + A L+E ++++DP R SA L+
Sbjct: 246 SLDCLHPEK--HEDVI--------------------ARELIEKMIAMDPQKRPSAKHVLK 283
Query: 413 SEFF 416
FF
Sbjct: 284 HPFF 287
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 92/207 (44%), Gaps = 15/207 (7%)
Query: 138 IGQGTYSNVYRARDLDQ--KKI-VALKKVRFDNLEPESVRFMAREIHILRRLDHINVIKL 194
IG+G + VY LD KKI A+K + E +F+ I I++ H NV+ L
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI-IMKDFSHPNVLSL 97
Query: 195 EGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVL 253
G + R S +V YM+H DL + + + + Q+ G+ S+ +
Sbjct: 98 LG-ICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFV 156
Query: 254 HRDIKGSNLLIDNNGILKIADFGLA-----SFYDPDQNQPLTSRVVTLWYRPPELLLGAT 308
HRD+ N ++D +K+ADFGLA +D N+ +++ W L
Sbjct: 157 HRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKT-GAKLPVKWMALES--LQTQ 213
Query: 309 YYGTAVDLWSTGCILAELYA-GKPIMP 334
+ T D+WS G +L EL G P P
Sbjct: 214 KFTTKSDVWSFGVLLWELMTRGAPPYP 240
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 99/208 (47%), Gaps = 20/208 (9%)
Query: 135 LDKIGQGTYSNVY--RARDL---DQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHI 189
L ++GQG++ VY ARD+ + + VA+K V E + F+ E +++
Sbjct: 21 LRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFL-NEASVMKGFTCH 79
Query: 190 NVIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLA--------SHPGLKFSEAQVKCYMQ-Q 239
+V++L G+V+ +V E M H DL ++PG Q M +
Sbjct: 80 HVVRLLGVVSKGQPT--LVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAE 137
Query: 240 LLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLA-SFYDPDQNQPLTSRVVTLWY 298
+ G+ + +++ +HRD+ N ++ ++ +KI DFG+ Y+ D + ++ + +
Sbjct: 138 IADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 197
Query: 299 RPPELLLGATYYGTAVDLWSTGCILAEL 326
PE L + T+ D+WS G +L E+
Sbjct: 198 MAPESLKDGV-FTTSSDMWSFGVVLWEI 224
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 92/197 (46%), Gaps = 12/197 (6%)
Query: 135 LDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINVIKL 194
L ++G G + V + Q VA+K ++ ++ + +E + +L H ++K
Sbjct: 13 LKELGSGQFGVVKLGKWKGQYD-VAVKMIKEGSMSEDE---FFQEAQTMMKLSHPKLVKF 68
Query: 195 EGLVTSRMSCSLYLVFEYMEHD--LAGLASH-PGLKFSEAQVKCYMQQLLCGLDHCHSRG 251
G+ + +Y+V EY+ + L L SH GL+ S+ CY + G+ S
Sbjct: 69 YGVCSKEYP--IYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCY--DVCEGMAFLESHQ 124
Query: 252 VLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGATYYG 311
+HRD+ N L+D + +K++DFG+ + DQ + + PE + Y
Sbjct: 125 FIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPE-VFHYFKYS 183
Query: 312 TAVDLWSTGCILAELYA 328
+ D+W+ G ++ E+++
Sbjct: 184 SKSDVWAFGILMWEVFS 200
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 99/208 (47%), Gaps = 20/208 (9%)
Query: 135 LDKIGQGTYSNVY--RARDL---DQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHI 189
L ++GQG++ VY ARD+ + + VA+K V E + F+ E +++
Sbjct: 22 LRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFL-NEASVMKGFTCH 80
Query: 190 NVIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLA--------SHPGLKFSEAQVKCYMQ-Q 239
+V++L G+V+ +V E M H DL ++PG Q M +
Sbjct: 81 HVVRLLGVVSKGQPT--LVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAE 138
Query: 240 LLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLA-SFYDPDQNQPLTSRVVTLWY 298
+ G+ + +++ +HRD+ N ++ ++ +KI DFG+ Y+ D + ++ + +
Sbjct: 139 IADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 198
Query: 299 RPPELLLGATYYGTAVDLWSTGCILAEL 326
PE L + T+ D+WS G +L E+
Sbjct: 199 MAPESLKDGV-FTTSSDMWSFGVVLWEI 225
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 100/237 (42%), Gaps = 55/237 (23%)
Query: 135 LDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINVIKL 194
++ +G+G Y V+R L + VA+K F + + +S F EI+ L H N++
Sbjct: 13 VECVGKGRYGEVWRG--LWHGESVAVKI--FSSRDEQS-WFRETEIYNTVLLRHDNIL-- 65
Query: 195 EGLVTSRM-----SCSLYLVFEYMEH-------DLAGLASHPGLKFSEAQVKCYMQQLLC 242
G + S M S L+L+ Y EH L H L+ + + C
Sbjct: 66 -GFIASDMTSRNSSTQLWLITHYHEHGSLYDFLQRQTLEPHLALRLAVSAA--------C 116
Query: 243 GLDHCHSR--------GVLHRDIKGSNLLIDNNGILKIADFGLA------SFYDPDQNQP 288
GL H H + HRD K N+L+ +N IAD GLA S Y N P
Sbjct: 117 GLAHLHVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNP 176
Query: 289 LTSRVVTLWYRPPELL-------LGATYYGTAVDLWSTGCILAELYAGKPIMPGRTE 338
RV T Y PE+L +Y T D+W+ G +L E+ A + I+ G E
Sbjct: 177 ---RVGTKRYMAPEVLDEQIRTDCFESYKWT--DIWAFGLVLWEI-ARRTIVNGIVE 227
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 101/214 (47%), Gaps = 25/214 (11%)
Query: 132 FEKLDKIGQGTYSNVYRARDL---DQKKI-VALKKVRFDNLEPESVRFMAREIHILRRLD 187
F+K+ +G G + VY+ + ++ KI VA+K++R + P++ + + E +++ +D
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASVD 76
Query: 188 HINVIKLEGL-VTSRMSCSLYL-----VFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLL 241
+ +V +L G+ +TS + + L + +Y+ + S L + Q+
Sbjct: 77 NPHVCRLLGICLTSTVQLIMQLMPFGXLLDYVREHKDNIGSQYLLNWC--------VQIA 128
Query: 242 CGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTS--RVVTLWYR 299
G+++ R ++HRD+ N+L+ +KI DFGLA ++ + +V W
Sbjct: 129 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 188
Query: 300 PPELLLGATYYGTAVDLWSTGCILAEL--YAGKP 331
+L Y D+WS G + EL + KP
Sbjct: 189 LESIL--HRIYTHQSDVWSYGVTVWELMTFGSKP 220
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 101/214 (47%), Gaps = 25/214 (11%)
Query: 132 FEKLDKIGQGTYSNVYRARDL---DQKKI-VALKKVRFDNLEPESVRFMAREIHILRRLD 187
F+K+ +G G + VY+ + ++ KI VA+K++R + P++ + + E +++ +D
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASVD 79
Query: 188 HINVIKLEGL-VTSRMSCSLYL-----VFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLL 241
+ +V +L G+ +TS + + L + +Y+ + S L + Q+
Sbjct: 80 NPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWC--------VQIA 131
Query: 242 CGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQ--PLTSRVVTLWYR 299
G+++ R ++HRD+ N+L+ +KI DFGLA ++ + +V W
Sbjct: 132 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 191
Query: 300 PPELLLGATYYGTAVDLWSTGCILAEL--YAGKP 331
+L Y D+WS G + EL + KP
Sbjct: 192 LESIL--HRIYTHQSDVWSYGVTVWELMTFGSKP 223
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 93/212 (43%), Gaps = 32/212 (15%)
Query: 137 KIGQGTYSNV----YRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINVI 192
++G G + +V YR R +K+I KV E M RE I+ +LD+ ++
Sbjct: 17 ELGCGNFGSVRQGVYRMR---KKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIV 73
Query: 193 KLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQ--------VKCYMQQLLCGL 244
+L G+ + +L LV E +AG P KF + V + Q+ G+
Sbjct: 74 RLIGVCQAE---ALMLVME-----MAG--GGPLHKFLVGKREEIPVSNVAELLHQVSMGM 123
Query: 245 DHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLW---YRPP 301
+ + +HRD+ N+L+ N KI+DFGL+ D + T+R W + P
Sbjct: 124 KYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSY-YTARSAGKWPLKWYAP 182
Query: 302 ELLLGATYYGTAVDLWSTGCILAEL--YAGKP 331
E + + + D+WS G + E Y KP
Sbjct: 183 E-CINFRKFSSRSDVWSYGVTMWEALSYGQKP 213
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 91/209 (43%), Gaps = 26/209 (12%)
Query: 137 KIGQGTYSNV----YRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINVI 192
++G G + +V YR R +K+I KV E M RE I+ +LD+ ++
Sbjct: 343 ELGCGNFGSVRQGVYRMR---KKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIV 399
Query: 193 KLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGL-----KFSEAQVKCYMQQLLCGLDHC 247
+L G+ + +L LV E G H L + + V + Q+ G+ +
Sbjct: 400 RLIGVCQAE---ALMLVMEMA----GGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYL 452
Query: 248 HSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLW---YRPPELL 304
+ +HR++ N+L+ N KI+DFGL+ D + T+R W + PE
Sbjct: 453 EEKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSY-YTARSAGKWPLKWYAPE-C 510
Query: 305 LGATYYGTAVDLWSTGCILAEL--YAGKP 331
+ + + D+WS G + E Y KP
Sbjct: 511 INFRKFSSRSDVWSYGVTMWEALSYGQKP 539
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 98/248 (39%), Gaps = 32/248 (12%)
Query: 126 PRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPES----VRFMAREIH 181
PR SF K +G G + V A K A V L+P + + E+
Sbjct: 44 PRNRLSFGK--TLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELK 101
Query: 182 ILRRL-DHINVIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLA-----------SHPGL-- 226
+L L +H+N++ L G T + ++ EY + DL + P +
Sbjct: 102 VLSYLGNHMNIVNLLGACT--IGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIME 159
Query: 227 ----KFSEAQVKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYD 282
+ + Q+ G+ S+ +HRD+ N+L+ + I KI DFGLA
Sbjct: 160 DDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARHIK 219
Query: 283 PDQNQPL--TSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYA-GKPIMPGRTEV 339
D N + +R+ W P + Y D+WS G L EL++ G PG
Sbjct: 220 NDSNYVVKGNARLPVKWMAPESIF--NCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVD 277
Query: 340 EQLHKIFK 347
+ +K+ K
Sbjct: 278 SKFYKMIK 285
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 90/173 (52%), Gaps = 28/173 (16%)
Query: 125 VPRRADS-FEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPES-----VRFMAR 178
+P AD+ E +IG+G + V++ R + K +VA+K + + E E+ + R
Sbjct: 13 LPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQR 72
Query: 179 EIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEY-----MEHDLAGLASHPGLKFSEAQV 233
E+ I+ L+H N++KL GL M +V E+ + H L A HP +K+S V
Sbjct: 73 EVFIMSNLNHPNIVKLYGL----MHNPPRMVMEFVPCGDLYHRLLDKA-HP-IKWS---V 123
Query: 234 KC-YMQQLLCGLDHCHSRG--VLHRDIKGSNLL---IDNNGIL--KIADFGLA 278
K M + G+++ ++ ++HRD++ N+ +D N + K+ADFGL+
Sbjct: 124 KLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLS 176
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 101/214 (47%), Gaps = 25/214 (11%)
Query: 132 FEKLDKIGQGTYSNVYRARDL---DQKKI-VALKKVRFDNLEPESVRFMAREIHILRRLD 187
F+K+ +G G + VY+ + ++ KI VA+K++R + P++ + + E +++ +D
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASVD 77
Query: 188 HINVIKLEGL-VTSRMSCSLYL-----VFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLL 241
+ +V +L G+ +TS + + L + +Y+ + S L + Q+
Sbjct: 78 NPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWC--------VQIA 129
Query: 242 CGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLT--SRVVTLWYR 299
G+++ R ++HRD+ N+L+ +KI DFGLA ++ + +V W
Sbjct: 130 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 189
Query: 300 PPELLLGATYYGTAVDLWSTGCILAEL--YAGKP 331
+L Y D+WS G + EL + KP
Sbjct: 190 LESIL--HRIYTHQSDVWSYGVTVWELMTFGSKP 221
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 101/214 (47%), Gaps = 25/214 (11%)
Query: 132 FEKLDKIGQGTYSNVYRARDL---DQKKI-VALKKVRFDNLEPESVRFMAREIHILRRLD 187
F+K+ +G G + VY+ + ++ KI VA+K++R + P++ + + E +++ +D
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASVD 76
Query: 188 HINVIKLEGL-VTSRMSCSLYL-----VFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLL 241
+ +V +L G+ +TS + + L + +Y+ + S L + Q+
Sbjct: 77 NPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWC--------VQIA 128
Query: 242 CGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTS--RVVTLWYR 299
G+++ R ++HRD+ N+L+ +KI DFGLA ++ + +V W
Sbjct: 129 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 188
Query: 300 PPELLLGATYYGTAVDLWSTGCILAEL--YAGKP 331
+L Y D+WS G + EL + KP
Sbjct: 189 LESIL--HRIYTHQSDVWSYGVTVWELMTFGSKP 220
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 101/214 (47%), Gaps = 25/214 (11%)
Query: 132 FEKLDKIGQGTYSNVYRARDL---DQKKI-VALKKVRFDNLEPESVRFMAREIHILRRLD 187
F+K+ +G G + VY+ + ++ KI VA+K++R + P++ + + E +++ +D
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASVD 75
Query: 188 HINVIKLEGL-VTSRMSCSLYL-----VFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLL 241
+ +V +L G+ +TS + + L + +Y+ + S L + Q+
Sbjct: 76 NPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWC--------VQIA 127
Query: 242 CGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTS--RVVTLWYR 299
G+++ R ++HRD+ N+L+ +KI DFGLA ++ + +V W
Sbjct: 128 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 187
Query: 300 PPELLLGATYYGTAVDLWSTGCILAEL--YAGKP 331
+L Y D+WS G + EL + KP
Sbjct: 188 LESIL--HRIYTHQSDVWSYGVTVWELMTFGSKP 219
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 94/246 (38%), Gaps = 28/246 (11%)
Query: 126 PRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPES----VRFMAREIH 181
PR SF K +G G + V A K A V L+P + + E+
Sbjct: 37 PRNRLSFGK--TLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELK 94
Query: 182 ILRRL-DHINVIKLEG--------LVTSRMSC--SLYLVFEYMEHDLAGLASHPGL---- 226
+L L +H+N++ L G LV + C L + P +
Sbjct: 95 VLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDD 154
Query: 227 --KFSEAQVKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPD 284
+ + Q+ G+ S+ +HRD+ N+L+ + I KI DFGLA D
Sbjct: 155 ELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKND 214
Query: 285 QNQPL--TSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYA-GKPIMPGRTEVEQ 341
N + +R+ W P + Y D+WS G L EL++ G PG +
Sbjct: 215 SNYVVKGNARLPVKWMAPESIF--NCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK 272
Query: 342 LHKIFK 347
+K+ K
Sbjct: 273 FYKMIK 278
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 101/214 (47%), Gaps = 25/214 (11%)
Query: 132 FEKLDKIGQGTYSNVYRARDL---DQKKI-VALKKVRFDNLEPESVRFMAREIHILRRLD 187
F+K+ +G G + VY+ + ++ KI VA+K++R + P++ + + E +++ +D
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASVD 78
Query: 188 HINVIKLEGL-VTSRMSCSLYL-----VFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLL 241
+ +V +L G+ +TS + + L + +Y+ + S L + Q+
Sbjct: 79 NPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWC--------VQIA 130
Query: 242 CGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLT--SRVVTLWYR 299
G+++ R ++HRD+ N+L+ +KI DFGLA ++ + +V W
Sbjct: 131 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 190
Query: 300 PPELLLGATYYGTAVDLWSTGCILAEL--YAGKP 331
+L Y D+WS G + EL + KP
Sbjct: 191 LESIL--HRIYTHQSDVWSYGVTVWELMTFGSKP 222
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 54/115 (46%), Gaps = 5/115 (4%)
Query: 236 YMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPL--TSRV 293
+ Q+ G+ S+ +HRD+ N+L+ N + KI DFGLA D N + +R+
Sbjct: 163 FSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL 222
Query: 294 VTLWYRPPELLLGATYYGTAVDLWSTGCILAELYA-GKPIMPGRTEVEQLHKIFK 347
W P + Y D+WS G +L E+++ G PG + +K+ K
Sbjct: 223 PVKWMAPESIF--DCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVK 275
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 71/152 (46%), Gaps = 8/152 (5%)
Query: 132 FEKLD---KIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDH 188
FE+L+ IG+G + VY R + VA++ + + + ++ RE+ R+ H
Sbjct: 32 FEQLEIGELIGKGRFGQVYHGRWHGE---VAIRLIDIERDNEDQLKAFKREVMAYRQTRH 88
Query: 189 INVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCH 248
NV+ G S ++ L + + + + Q+++ G+ + H
Sbjct: 89 ENVVLFMGACMSPPHLAIITSL-CKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLH 147
Query: 249 SRGVLHRDIKGSNLLIDNNGILKIADFGLASF 280
++G+LH+D+K N+ DN ++ I DFGL S
Sbjct: 148 AKGILHKDLKSKNVFYDNGKVV-ITDFGLFSI 178
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 98/248 (39%), Gaps = 32/248 (12%)
Query: 126 PRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPES----VRFMAREIH 181
PR SF K +G G + V A K A V L+P + + E+
Sbjct: 21 PRNRLSFGK--TLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELK 78
Query: 182 ILRRL-DHINVIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLA-----------SHPGL-- 226
+L L +H+N++ L G T + ++ EY + DL + P +
Sbjct: 79 VLSYLGNHMNIVNLLGACT--IGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIME 136
Query: 227 ----KFSEAQVKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYD 282
+ + Q+ G+ S+ +HRD+ N+L+ + I KI DFGLA
Sbjct: 137 DDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIK 196
Query: 283 PDQNQPL--TSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYA-GKPIMPGRTEV 339
D N + +R+ W P + Y D+WS G L EL++ G PG
Sbjct: 197 NDSNYVVKGNARLPVKWMAPESIF--NCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVD 254
Query: 340 EQLHKIFK 347
+ +K+ K
Sbjct: 255 SKFYKMIK 262
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 72/156 (46%), Gaps = 8/156 (5%)
Query: 132 FEKLD-KIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHIN 190
F K D +IG+G++ VY+ D + VA +++ L + E L+ L H N
Sbjct: 27 FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPN 86
Query: 191 VIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKC---YMQQLLCGLDHC 247
+++ S + +V E +G +F ++K + +Q+L GL
Sbjct: 87 IVRFYDSWESTVKGKKCIVL-VTELXTSGTLKTYLKRFKVXKIKVLRSWCRQILKGLQFL 145
Query: 248 HSRG--VLHRDIKGSNLLIDN-NGILKIADFGLASF 280
H+R ++HRD+K N+ I G +KI D GLA+
Sbjct: 146 HTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATL 181
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 99/208 (47%), Gaps = 20/208 (9%)
Query: 135 LDKIGQGTYSNVY--RARDL---DQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHI 189
L ++GQG++ VY ARD+ + + VA+K V E + F+ E +++
Sbjct: 23 LRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFL-NEASVMKGFTCH 81
Query: 190 NVIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLA--------SHPGLKFSEAQVKCYMQ-Q 239
+V++L G+V+ +V E M H DL ++PG Q M +
Sbjct: 82 HVVRLLGVVSKGQPT--LVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAE 139
Query: 240 LLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLA-SFYDPDQNQPLTSRVVTLWY 298
+ G+ + +++ +HR++ N ++ ++ +KI DFG+ Y+ D + ++ + +
Sbjct: 140 IADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 199
Query: 299 RPPELLLGATYYGTAVDLWSTGCILAEL 326
PE L + T+ D+WS G +L E+
Sbjct: 200 MAPESLKDGV-FTTSSDMWSFGVVLWEI 226
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 94/246 (38%), Gaps = 28/246 (11%)
Query: 126 PRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPES----VRFMAREIH 181
PR SF K +G G + V A K A V L+P + + E+
Sbjct: 44 PRNRLSFGK--TLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELK 101
Query: 182 ILRRL-DHINVIKLEG--------LVTSRMSC--SLYLVFEYMEHDLAGLASHPGL---- 226
+L L +H+N++ L G LV + C L + P +
Sbjct: 102 VLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDD 161
Query: 227 --KFSEAQVKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPD 284
+ + Q+ G+ S+ +HRD+ N+L+ + I KI DFGLA D
Sbjct: 162 ELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKND 221
Query: 285 QNQPL--TSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYA-GKPIMPGRTEVEQ 341
N + +R+ W P + Y D+WS G L EL++ G PG +
Sbjct: 222 SNYVVKGNARLPVKWMAPESIF--NCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK 279
Query: 342 LHKIFK 347
+K+ K
Sbjct: 280 FYKMIK 285
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 99/208 (47%), Gaps = 20/208 (9%)
Query: 135 LDKIGQGTYSNVY--RARDL---DQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHI 189
L ++GQG++ VY ARD+ + + VA+K V E + F+ E +++
Sbjct: 22 LRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFL-NEASVMKGFTCH 80
Query: 190 NVIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLA--------SHPGLKFSEAQVKCYMQ-Q 239
+V++L G+V+ +V E M H DL ++PG Q M +
Sbjct: 81 HVVRLLGVVSKGQPT--LVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAE 138
Query: 240 LLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLA-SFYDPDQNQPLTSRVVTLWY 298
+ G+ + +++ +HR++ N ++ ++ +KI DFG+ Y+ D + ++ + +
Sbjct: 139 IADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 198
Query: 299 RPPELLLGATYYGTAVDLWSTGCILAEL 326
PE L + T+ D+WS G +L E+
Sbjct: 199 MAPESLKDGV-FTTSSDMWSFGVVLWEI 225
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 52/96 (54%), Gaps = 5/96 (5%)
Query: 236 YMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLT-SRVV 294
Y+ + + GL H + HRDIK N+L+ NN IADFGLA ++ ++ T +V
Sbjct: 136 YLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVG 195
Query: 295 TLWYRPPELLLGATYYG----TAVDLWSTGCILAEL 326
T Y PE+L GA + +D+++ G +L EL
Sbjct: 196 TRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWEL 231
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 98/248 (39%), Gaps = 32/248 (12%)
Query: 126 PRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPES----VRFMAREIH 181
PR SF K +G G + V A K A V L+P + + E+
Sbjct: 39 PRNRLSFGK--TLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELK 96
Query: 182 ILRRL-DHINVIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLA-----------SHPGL-- 226
+L L +H+N++ L G T + ++ EY + DL + P +
Sbjct: 97 VLSYLGNHMNIVNLLGACT--IGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIME 154
Query: 227 ----KFSEAQVKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYD 282
+ + Q+ G+ S+ +HRD+ N+L+ + I KI DFGLA
Sbjct: 155 DDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIK 214
Query: 283 PDQNQPL--TSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYA-GKPIMPGRTEV 339
D N + +R+ W P + Y D+WS G L EL++ G PG
Sbjct: 215 NDSNYVVKGNARLPVKWMAPESIF--NCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVD 272
Query: 340 EQLHKIFK 347
+ +K+ K
Sbjct: 273 SKFYKMIK 280
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 100/216 (46%), Gaps = 21/216 (9%)
Query: 128 RADSFEKLDKIGQGTYSNVYRARDLDQKKIVALK---KVRFDNLEPES-VRFMAREIHIL 183
+ +++ +G G + VY+ + + + V + K+ + P++ V FM E I+
Sbjct: 36 KETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFM-DEALIM 94
Query: 184 RRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKC-YMQQLLC 242
+DH ++++L G+ +S ++ LV + M H H +Q+ + Q+
Sbjct: 95 ASMDHPHLVRLLGVC---LSPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAK 151
Query: 243 GLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLT--SRVVTLWYRP 300
G+ + R ++HRD+ N+L+ + +KI DFGLA + D+ + ++ W
Sbjct: 152 GMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKW--- 208
Query: 301 PELLLGATYYGTAV---DLWSTGCILAEL--YAGKP 331
+ L +Y D+WS G + EL + GKP
Sbjct: 209 --MALECIHYRKFTHQSDVWSYGVTIWELMTFGGKP 242
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 97/213 (45%), Gaps = 30/213 (14%)
Query: 135 LDKIGQGTYSNVY--RARDL---DQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHI 189
L ++GQG++ VY ARD+ + + VA+K V E + F+ E +++
Sbjct: 22 LRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFL-NEASVMKGFTCH 80
Query: 190 NVIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLA--------SHPGLKFSEAQVKCYMQ-Q 239
+V++L G+V+ +V E M H DL ++PG Q M +
Sbjct: 81 HVVRLLGVVSKGQPT--LVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAE 138
Query: 240 LLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGL------ASFYDPDQNQPLTSRV 293
+ G+ + +++ +HRD+ N ++ ++ +KI DFG+ ++Y L R
Sbjct: 139 IADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVR- 197
Query: 294 VTLWYRPPELLLGATYYGTAVDLWSTGCILAEL 326
W P L G + T+ D+WS G +L E+
Sbjct: 198 ---WMAPESLKDGV--FTTSSDMWSFGVVLWEI 225
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 98/209 (46%), Gaps = 15/209 (7%)
Query: 132 FEKLDKIGQGTYSNVYRARDL---DQKKI-VALKKVRFDNLEPESVRFMAREIHILRRLD 187
F+K+ +G G + VY+ + ++ KI VA+K++R + P++ + + E +++ +D
Sbjct: 24 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASVD 82
Query: 188 HINVIKLEGLVTSRMSCSLYLVFEYMEHD-LAGLASHPGLKFSEAQVKCYMQQLLCGLDH 246
+ +V +L G+ ++ ++ L+ + M L + + Q+ G+++
Sbjct: 83 NPHVCRLLGIC---LTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 139
Query: 247 CHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQ--PLTSRVVTLWYRPPELL 304
R ++HRD+ N+L+ +KI DFGLA ++ + +V W +L
Sbjct: 140 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 199
Query: 305 LGATYYGTAVDLWSTGCILAEL--YAGKP 331
Y D+WS G + EL + KP
Sbjct: 200 --HRIYTHQSDVWSYGVTVWELMTFGSKP 226
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 100/214 (46%), Gaps = 25/214 (11%)
Query: 132 FEKLDKIGQGTYSNVYRARDL---DQKKI-VALKKVRFDNLEPESVRFMAREIHILRRLD 187
F+K+ +G G + VY+ + ++ KI VA+K++R + P++ + + E +++ +D
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASVD 78
Query: 188 HINVIKLEGL-VTSRMSCSLYL-----VFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLL 241
+ +V +L G+ +TS + L + +Y+ + S L + Q+
Sbjct: 79 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWC--------VQIA 130
Query: 242 CGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLT--SRVVTLWYR 299
G+++ R ++HRD+ N+L+ +KI DFGLA ++ + +V W
Sbjct: 131 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 190
Query: 300 PPELLLGATYYGTAVDLWSTGCILAEL--YAGKP 331
+L Y D+WS G + EL + KP
Sbjct: 191 LESIL--HRIYTHQSDVWSYGVTVWELMTFGSKP 222
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 100/214 (46%), Gaps = 25/214 (11%)
Query: 132 FEKLDKIGQGTYSNVYRARDL---DQKKI-VALKKVRFDNLEPESVRFMAREIHILRRLD 187
F+K+ +G G + VY+ + ++ KI VA+K++R + P++ + + E +++ +D
Sbjct: 23 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASVD 81
Query: 188 HINVIKLEGL-VTSRMSCSLYL-----VFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLL 241
+ +V +L G+ +TS + L + +Y+ + S L + Q+
Sbjct: 82 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWC--------VQIA 133
Query: 242 CGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLT--SRVVTLWYR 299
G+++ R ++HRD+ N+L+ +KI DFGLA ++ + +V W
Sbjct: 134 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 193
Query: 300 PPELLLGATYYGTAVDLWSTGCILAEL--YAGKP 331
+L Y D+WS G + EL + KP
Sbjct: 194 LESIL--HRIYTHQSDVWSYGVTVWELMTFGSKP 225
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 94/213 (44%), Gaps = 20/213 (9%)
Query: 135 LDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINVIKL 194
+ K+G+G +S V L ALK++ E + RE + R +H N+++L
Sbjct: 34 IQKLGEGGFSYVDLVEGLHDGHFYALKRILCH--EQQDREEAQREADMHRLFNHPNILRL 91
Query: 195 EGLVT----SRMSCSLYLVF---EYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHC 247
++ L L F + +++ L G +E Q+ + + GL+
Sbjct: 92 VAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKD-KGNFLTEDQILWLLLGICRGLEAI 150
Query: 248 HSRGVLHRDIKGSNLLIDNNG---ILKIADFGLASFYDPDQNQPLT-----SRVVTLWYR 299
H++G HRD+K +N+L+ + G ++ + A + Q LT ++ T+ YR
Sbjct: 151 HAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYR 210
Query: 300 PPELLLGATY--YGTAVDLWSTGCILAELYAGK 330
PEL ++ D+WS GC+L + G+
Sbjct: 211 APELFSVQSHCVIDERTDVWSLGCVLYAMMFGE 243
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 98/209 (46%), Gaps = 15/209 (7%)
Query: 132 FEKLDKIGQGTYSNVYRARDL---DQKKI-VALKKVRFDNLEPESVRFMAREIHILRRLD 187
F+K+ +G G + VY+ + ++ KI VA+K++R + P++ + + E +++ +D
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASVD 75
Query: 188 HINVIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDH 246
+ +V +L G+ ++ ++ L+ + M L + + Q+ G+++
Sbjct: 76 NPHVCRLLGIC---LTSTVQLITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 132
Query: 247 CHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTS--RVVTLWYRPPELL 304
R ++HRD+ N+L+ +KI DFGLA ++ + +V W +L
Sbjct: 133 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 192
Query: 305 LGATYYGTAVDLWSTGCILAEL--YAGKP 331
Y D+WS G + EL + KP
Sbjct: 193 --HRIYTHQSDVWSYGVTVWELMTFGSKP 219
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 100/214 (46%), Gaps = 25/214 (11%)
Query: 132 FEKLDKIGQGTYSNVYRARDL---DQKKI-VALKKVRFDNLEPESVRFMAREIHILRRLD 187
F+K+ +G G + VY+ + ++ KI VA+K++R + P++ + + E +++ +D
Sbjct: 27 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASVD 85
Query: 188 HINVIKLEGL-VTSRMSCSLYL-----VFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLL 241
+ +V +L G+ +TS + L + +Y+ + S L + Q+
Sbjct: 86 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWC--------VQIA 137
Query: 242 CGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTS--RVVTLWYR 299
G+++ R ++HRD+ N+L+ +KI DFGLA ++ + +V W
Sbjct: 138 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 197
Query: 300 PPELLLGATYYGTAVDLWSTGCILAEL--YAGKP 331
+L Y D+WS G + EL + KP
Sbjct: 198 LESIL--HRIYTHQSDVWSYGVTVWELMTFGSKP 229
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.316 0.133 0.392
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,982,234
Number of Sequences: 62578
Number of extensions: 868838
Number of successful extensions: 4799
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1010
Number of HSP's successfully gapped in prelim test: 89
Number of HSP's that attempted gapping in prelim test: 1772
Number of HSP's gapped (non-prelim): 1175
length of query: 709
length of database: 14,973,337
effective HSP length: 106
effective length of query: 603
effective length of database: 8,340,069
effective search space: 5029061607
effective search space used: 5029061607
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)