BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005221
(708 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 216 bits (549), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 115/280 (41%), Positives = 176/280 (62%), Gaps = 18/280 (6%)
Query: 141 YRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVY 200
+RL RK+G G FG++Y+G + + NE EVA+K E+ +K YE ++Y
Sbjct: 9 FRLGRKIGSGSFGEIYLG---TNIQTNE-------EVAIKLENVKTKHPQL--LYESKIY 56
Query: 201 NTLGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISIL 260
L G G+P V + G +GDY V+VMD+LGPSL D++N S +S++ V +A + I+ +
Sbjct: 57 RILQGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRV 116
Query: 261 EKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYDQRPDVF 320
E +HSK ++H D+KP+NFL+G ++ ++++D GLA K+RD++T H+ Y + ++
Sbjct: 117 EFVHSKSFLHRDIKPDNFLMGLGRRANQ--VYIIDFGLAKKYRDTSTHQHIPYRENKNL- 173
Query: 321 RGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQG---ENKGFLVCKKKM 377
GT RYASV+ HLG SRRDDLESL Y L++ LRG LPWQG + + K + +KK+
Sbjct: 174 TGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKV 233
Query: 378 ATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLF 417
ATS + LC P F + Y +L+FD++P+Y+ LF
Sbjct: 234 ATSIEALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLF 273
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 195 bits (496), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 110/283 (38%), Positives = 169/283 (59%), Gaps = 18/283 (6%)
Query: 141 YRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVY 200
YRL RK+G G FG +Y+G + + A E EVA+K E +K E ++Y
Sbjct: 11 YRLGRKIGSGSFGDIYLG---TDIAAGE-------EVAIKLECVKTKHPQL--HIESKIY 58
Query: 201 NTLGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISIL 260
+ G G+P + + G +GDY VMVM++LGPSL D++N S S++ V +A + IS +
Sbjct: 59 KMMQGGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRI 118
Query: 261 EKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYDQRPDVF 320
E +HSK ++H DVKP+NFL+G + ++++D GLA K+RD+ T H+ Y + ++
Sbjct: 119 EYIHSKNFIHRDVKPDNFLMGLGKKGN--LVYIIDFGLAKKYRDARTHQHIPYRENKNL- 175
Query: 321 RGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQG---ENKGFLVCKKKM 377
GT RYAS++ HLG SRRDDLESL Y L++ G LPWQG + K + +KKM
Sbjct: 176 TGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKM 235
Query: 378 ATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGI 420
+T + LC P+ F ++ + +L+FD++P+Y+ LF +
Sbjct: 236 STPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNL 278
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 195 bits (496), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 110/283 (38%), Positives = 169/283 (59%), Gaps = 18/283 (6%)
Query: 141 YRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVY 200
YRL RK+G G FG +Y+G + + A E EVA+K E +K E ++Y
Sbjct: 9 YRLGRKIGSGSFGDIYLG---TDIAAGE-------EVAIKLECVKTKHPQL--HIESKIY 56
Query: 201 NTLGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISIL 260
+ G G+P + + G +GDY VMVM++LGPSL D++N S S++ V +A + IS +
Sbjct: 57 KMMQGGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRI 116
Query: 261 EKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYDQRPDVF 320
E +HSK ++H DVKP+NFL+G + ++++D GLA K+RD+ T H+ Y + ++
Sbjct: 117 EYIHSKNFIHRDVKPDNFLMGLGKKGN--LVYIIDFGLAKKYRDARTHQHIPYRENKNL- 173
Query: 321 RGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQG---ENKGFLVCKKKM 377
GT RYAS++ HLG SRRDDLESL Y L++ G LPWQG + K + +KKM
Sbjct: 174 TGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKM 233
Query: 378 ATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGI 420
+T + LC P+ F ++ + +L+FD++P+Y+ LF +
Sbjct: 234 STPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNL 276
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 194 bits (494), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 111/283 (39%), Positives = 168/283 (59%), Gaps = 18/283 (6%)
Query: 141 YRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVY 200
YRL RK+G G FG +Y+G AN +G EVA+K E +K E + Y
Sbjct: 11 YRLGRKIGSGSFGDIYLG-------ANIASGE---EVAIKLECVKTKHPQL--HIESKFY 58
Query: 201 NTLGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISIL 260
+ G G+P + + G +GDY VMVM++LGPSL D++N S S++ V +A + IS +
Sbjct: 59 KMMQGGVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRI 118
Query: 261 EKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYDQRPDVF 320
E +HSK ++H DVKP+NFL+G + ++++D GLA K+RD+ T H+ Y + ++
Sbjct: 119 EYIHSKNFIHRDVKPDNFLMGLGKKGN--LVYIIDFGLAKKYRDARTHQHIPYRENKNL- 175
Query: 321 RGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQG---ENKGFLVCKKKM 377
GT RYAS++ HLG SRRDDLESL Y L++ G LPWQG + K + +KKM
Sbjct: 176 TGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKM 235
Query: 378 ATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGI 420
+T + LC P+ F ++ + +L+FD++P+Y+ LF +
Sbjct: 236 STPIEVLCKGYPSEFSTYLNFCRSLRFDDKPDYSYLRQLFRNL 278
>pdb|1EH4|A Chain A, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1EH4|B Chain B, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Mgatp
Length = 298
Score = 185 bits (470), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 98/284 (34%), Positives = 163/284 (57%), Gaps = 16/284 (5%)
Query: 141 YRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVY 200
Y++ R++G+G FG ++ G + +N + VA+KFE R S E++ Y
Sbjct: 12 YKVGRRIGEGSFGVIFEGTNL--LNNQQ--------VAIKFEPRRSDAPQLRD--EYRTY 59
Query: 201 NTLGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISIL 260
L G G+P V++ G++G + V+V+D+LGPSL D+ + S++ VA A + ++ +
Sbjct: 60 KLLAGCTGIPNVYYFGQEGLHNVLVIDLLGPSLEDLLDLCGRKFSVKTVAMAAKQMLARV 119
Query: 261 EKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYDQRPDVF 320
+ +H K V+ D+KP+NFL+G P + + +++VD G+ +RD T H+ Y ++ ++
Sbjct: 120 QSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNL- 178
Query: 321 RGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQG---ENKGFLVCKKKM 377
GT RY S++ HLGR SRRDDLE+L + ++ LRG LPWQG + + K + +KK
Sbjct: 179 SGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQ 238
Query: 378 ATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIV 421
+T LC P F +++ Y NL FD P+Y LF ++
Sbjct: 239 STPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVL 282
>pdb|2CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Cki7
Length = 297
Score = 185 bits (470), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 98/284 (34%), Positives = 163/284 (57%), Gaps = 16/284 (5%)
Query: 141 YRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVY 200
Y++ R++G+G FG ++ G + +N + VA+KFE R S E++ Y
Sbjct: 11 YKVGRRIGEGSFGVIFEGTNL--LNNQQ--------VAIKFEPRRSDAPQLRD--EYRTY 58
Query: 201 NTLGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISIL 260
L G G+P V++ G++G + V+V+D+LGPSL D+ + S++ VA A + ++ +
Sbjct: 59 KLLAGCTGIPNVYYFGQEGLHNVLVIDLLGPSLEDLLDLCGRKFSVKTVAMAAKQMLARV 118
Query: 261 EKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYDQRPDVF 320
+ +H K V+ D+KP+NFL+G P + + +++VD G+ +RD T H+ Y ++ ++
Sbjct: 119 QSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNL- 177
Query: 321 RGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQG---ENKGFLVCKKKM 377
GT RY S++ HLGR SRRDDLE+L + ++ LRG LPWQG + + K + +KK
Sbjct: 178 SGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQ 237
Query: 378 ATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIV 421
+T LC P F +++ Y NL FD P+Y LF ++
Sbjct: 238 STPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVL 281
>pdb|2C47|A Chain A, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|B Chain B, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|C Chain C, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|D Chain D, Structure Of Casein Kinase 1 Gamma 2
Length = 313
Score = 181 bits (458), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 101/285 (35%), Positives = 161/285 (56%), Gaps = 16/285 (5%)
Query: 139 PMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQ 198
P +R+ +K+G G FG++ +G+ + NE VA+K E S+ E++
Sbjct: 4 PNFRVGKKIGCGNFGELRLGKNLY---TNEY-------VAIKLEPIKSRAPQLH--LEYR 51
Query: 199 VYNTLGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAIS 258
Y L + GVP+V++ G G Y MV+++LGPSL D+++ T +++ V IAI+ I+
Sbjct: 52 FYKQLSATEGVPQVYYFGPXGKYNAMVLELLGPSLEDLFDLCDRTFTLKTVLMIAIQLIT 111
Query: 259 ILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYDQRPD 318
+E +H+K ++ DVKPENFL+G PGT + + ++D GLA ++ D T H+ Y +
Sbjct: 112 RMEYVHTKSLIYRDVKPENFLVGRPGTKRQHAIHIIDFGLAKEYIDPETKKHIPYREHKS 171
Query: 319 VFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGEN---KGFLVCKK 375
+ GT RY S++ HLG+ SRRDDLE+L + ++ LRG LPWQG + + + +
Sbjct: 172 L-TGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDT 230
Query: 376 KMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGI 420
K AT + LC P ++ YV L F E+P+Y LF +
Sbjct: 231 KRATPIEVLCENFPEEMATYLRYVRRLDFFEKPDYDYLRKLFTDL 275
>pdb|4HGL|A Chain A, Crystal Structure Of Ck1g3 With Compound 1
pdb|4HGS|A Chain A, Crystal Structure Of Ck1gs With Compound 13
Length = 330
Score = 178 bits (452), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 103/285 (36%), Positives = 161/285 (56%), Gaps = 17/285 (5%)
Query: 139 PMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQ 198
P +R+ +K+G G FG++ +G+ + NE VA+K E S+ E++
Sbjct: 9 PNFRVGKKIGCGNFGELRLGKNLY---TNEY-------VAIKLEPMKSRAPQLH--LEYR 56
Query: 199 VYNTLGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAIS 258
Y LG G+P+V++ G G Y MV+++LGPSL D+++ T S++ V IAI+ IS
Sbjct: 57 FYKQLGSGDGIPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCDRTFSLKTVLMIAIQLIS 116
Query: 259 ILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYDQRPD 318
+E +HSK ++ DVKPENFL+G PG ++ + ++D GLA ++ D T H+ Y +
Sbjct: 117 RMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFGLAKEYIDPETKKHIPYREHKS 176
Query: 319 VFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGEN---KGFLVCKK 375
+ GT RY S++ HLG+ SRRDDLE+L + ++ LRG LPWQG + + + +
Sbjct: 177 L-TGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDT 235
Query: 376 KMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGI 420
K AT + LC P ++ YV L F E+P+Y LF +
Sbjct: 236 KRATPIEVLCENFPE-MATYLRYVRRLDFFEKPDYDYLRKLFTDL 279
>pdb|2IZR|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZS|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZT|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZU|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
Length = 330
Score = 176 bits (447), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 102/285 (35%), Positives = 160/285 (56%), Gaps = 17/285 (5%)
Query: 139 PMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQ 198
P +R+ +K+G G FG++ +G+ + NE VA+K E S+ E++
Sbjct: 9 PNFRVGKKIGCGNFGELRLGKNLY---TNEY-------VAIKLEPMKSRAPQLH--LEYR 56
Query: 199 VYNTLGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAIS 258
Y LG G+P+V++ G G Y MV+++LGPSL D+++ T S++ V IAI+ IS
Sbjct: 57 FYKQLGSGDGIPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCDRTFSLKTVLMIAIQLIS 116
Query: 259 ILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYDQRPD 318
+E +HSK ++ DVKPENFL+G PG ++ + ++D LA ++ D T H+ Y +
Sbjct: 117 RMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPETKKHIPYREHKS 176
Query: 319 VFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGEN---KGFLVCKK 375
+ GT RY S++ HLG+ SRRDDLE+L + ++ LRG LPWQG + + + +
Sbjct: 177 L-TGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDT 235
Query: 376 KMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGI 420
K AT + LC P ++ YV L F E+P+Y LF +
Sbjct: 236 KRATPIEVLCENFPE-MATYLRYVRRLDFFEKPDYDYLRKLFTDL 279
>pdb|2CHL|A Chain A, Structure Of Casein Kinase 1 Gamma 3
Length = 351
Score = 176 bits (447), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 102/285 (35%), Positives = 160/285 (56%), Gaps = 17/285 (5%)
Query: 139 PMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQ 198
P +R+ +K+G G FG++ +G+ + NE VA+K E S+ E++
Sbjct: 30 PNFRVGKKIGCGNFGELRLGKNLY---TNEY-------VAIKLEPMKSRAPQLH--LEYR 77
Query: 199 VYNTLGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAIS 258
Y LG G+P+V++ G G Y MV+++LGPSL D+++ T S++ V IAI+ IS
Sbjct: 78 FYKQLGSGDGIPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCDRTFSLKTVLMIAIQLIS 137
Query: 259 ILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYDQRPD 318
+E +HSK ++ DVKPENFL+G PG ++ + ++D LA ++ D T H+ Y +
Sbjct: 138 RMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPETKKHIPYREHKS 197
Query: 319 VFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGEN---KGFLVCKK 375
+ GT RY S++ HLG+ SRRDDLE+L + ++ LRG LPWQG + + + +
Sbjct: 198 L-TGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDT 256
Query: 376 KMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGI 420
K AT + LC P ++ YV L F E+P+Y LF +
Sbjct: 257 KRATPIEVLCENFPE-MATYLRYVRRLDFFEKPDYDYLRKLFTDL 300
>pdb|2CMW|A Chain A, Structure Of Human Casein Kinase 1 Gamma-1 In Complex With
2-(2-Hydroxyethylamino)-6-(3-Chloroanilino)-9-
Isopropylpurine (Casp Target)
Length = 310
Score = 171 bits (432), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 99/283 (34%), Positives = 158/283 (55%), Gaps = 17/283 (6%)
Query: 142 RLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYN 201
R+ +K+G G FG++ +G+ + NE VA+K E S+ E++ Y
Sbjct: 3 RVGKKIGCGNFGELRLGKNLY---TNEY-------VAIKLEPIKSRAPQLH--LEYRFYK 50
Query: 202 TLGGS-HGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISIL 260
LG + G+P+V++ G G Y MV+++LGPSL D+++ T +++ V IAI+ +S +
Sbjct: 51 QLGSAGEGLPQVYYFGPXGKYNAMVLELLGPSLEDLFDLCDRTFTLKTVLMIAIQLLSRM 110
Query: 261 EKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYDQRPDVF 320
E +HSK ++ DVKPENFL+G G E + ++D GLA ++ D T H+ Y + +
Sbjct: 111 EYVHSKNLIYRDVKPENFLIGRQGNKKEHVIHIIDFGLAKEYIDPETKKHIPYREHKSL- 169
Query: 321 RGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGEN---KGFLVCKKKM 377
GT RY S++ HLG+ SRRDDLE+L + ++ LRG LPWQG + + + + K
Sbjct: 170 TGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKR 229
Query: 378 ATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGI 420
T + LC P ++ YV L F E+P+Y +LF +
Sbjct: 230 NTPIEALCENFPEEMATYLRYVRRLDFFEKPDYEYLRTLFTDL 272
>pdb|2LAV|A Chain A, Nmr Solution Structure Of Human Vaccinia-Related Kinase 1
Length = 361
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 101/325 (31%), Positives = 147/325 (45%), Gaps = 41/325 (12%)
Query: 115 KANAGGEDEGSTAPLPEKIAVGG--SPMYRLERK----LGKGGFGQVY---------VGR 159
KA G + L E+ AVG + M + E K +G+GGFG +Y VG
Sbjct: 5 KAAQAGRQSSAKRHLAEQFAVGEIITDMAKKEWKVGLPIGQGGFGCIYLADMNSSESVGS 64
Query: 160 RVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQ--VYNTLGGSHGVPR-----V 212
V E + G + LKF R++K P + Q + GVP+ +
Sbjct: 65 DAPCVVKVEPSDNGPLFTELKFYQRAAK------PEQIQKWIRTRKLKYLGVPKYWGSGL 118
Query: 213 HFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGD 272
H K + Y M+MD G L ++ N+ S + V +++ + ILE +H YVHGD
Sbjct: 119 HDKNGKS-YRFMIMDRFGSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHEYVHGD 177
Query: 273 VKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYDQRPD-VFRGTVRYASVHA 331
+K N LL PD+ ++LVD GLA +R G+H EY + P GT+ + S+ A
Sbjct: 178 IKASNLLLNYK-NPDQ--VYLVDYGLA--YRYCPEGVHKEYKEDPKRCHDGTIEFTSIDA 232
Query: 332 HLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCKKKMATSPDGLCCFC--- 388
H G SRR DLE L Y +I L G LPW+ + K K + + L C
Sbjct: 233 HNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDPKYVRDSKIRYRENIASLMDKCFPE 292
Query: 389 ---PAPFRQFVEYVVNLKFDEEPNY 410
P +++E V L + E+P Y
Sbjct: 293 KNKPGEIAKYMETVKLLDYTEKPLY 317
>pdb|2KTY|A Chain A, Solution Structure Of Human Vaccinia Related Kinase-1
pdb|2KUL|A Chain A, Solution Structure Of Human Vaccinia Related Kinase
1(Vrk1)
Length = 368
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 101/325 (31%), Positives = 147/325 (45%), Gaps = 41/325 (12%)
Query: 115 KANAGGEDEGSTAPLPEKIAVGG--SPMYRLERK----LGKGGFGQVY---------VGR 159
KA G + L E+ AVG + M + E K +G+GGFG +Y VG
Sbjct: 5 KAAQAGRQSSAKRHLAEQFAVGEIITDMAKKEWKVGLPIGQGGFGCIYLADMNSSESVGS 64
Query: 160 RVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQ--VYNTLGGSHGVPR-----V 212
V E + G + LKF R++K P + Q + GVP+ +
Sbjct: 65 DAPCVVKVEPSDNGPLFTELKFYQRAAK------PEQIQKWIRTRKLKYLGVPKYWGSGL 118
Query: 213 HFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGD 272
H K + Y M+MD G L ++ N+ S + V +++ + ILE +H YVHGD
Sbjct: 119 HDKNGKS-YRFMIMDRFGSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHEYVHGD 177
Query: 273 VKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYDQRPD-VFRGTVRYASVHA 331
+K N LL PD+ ++LVD GLA +R G+H EY + P GT+ + S+ A
Sbjct: 178 IKASNLLLNYK-NPDQ--VYLVDYGLA--YRYCPEGVHKEYKEDPKRCHDGTIEFTSIDA 232
Query: 332 HLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCKKKMATSPDGLCCFC--- 388
H G SRR DLE L Y +I L G LPW+ + K K + + L C
Sbjct: 233 HNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDPKYVRDSKIRYRENIASLMDKCFPE 292
Query: 389 ---PAPFRQFVEYVVNLKFDEEPNY 410
P +++E V L + E+P Y
Sbjct: 293 KNKPGEIAKYMETVKLLDYTEKPLY 317
>pdb|3OP5|A Chain A, Human Vaccinia-Related Kinase 1
pdb|3OP5|B Chain B, Human Vaccinia-Related Kinase 1
pdb|3OP5|C Chain C, Human Vaccinia-Related Kinase 1
pdb|3OP5|D Chain D, Human Vaccinia-Related Kinase 1
Length = 364
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 98/325 (30%), Positives = 145/325 (44%), Gaps = 41/325 (12%)
Query: 115 KANAGGEDEGSTAPLPEKIAVG------GSPMYRLERKLGKGGFGQVY---------VGR 159
KA G + L E+ AVG + +++ +G+GGFG +Y VG
Sbjct: 5 KAAQAGRQSSAKRHLAEQFAVGEIITDMAAAAWKVGLPIGQGGFGCIYLADMNSSESVGS 64
Query: 160 RVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQ--VYNTLGGSHGVPR-----V 212
V E + G + LKF R++K P + Q + GVP+ +
Sbjct: 65 DAPCVVKVEPSDNGPLFTELKFYQRAAK------PEQIQKWIRTRKLKYLGVPKYWGSGL 118
Query: 213 HFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGD 272
H K + Y M+MD G L ++ N+ S + V +++ + ILE +H YVHGD
Sbjct: 119 HDKNGKS-YRFMIMDRFGSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHEYVHGD 177
Query: 273 VKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYDQRPD-VFRGTVRYASVHA 331
+K N LL PD+ ++LVD GLA +R G+H Y P GT+ + S+ A
Sbjct: 178 IKASNLLLNYK-NPDQ--VYLVDYGLA--YRYCPEGVHKAYAADPKRCHDGTIEFTSIDA 232
Query: 332 HLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCKKKMATSPDGLC--CF-- 387
H G SRR DLE L Y +I L G LPW+ + K K + + L CF
Sbjct: 233 HNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDPKYVRDSKIRYRENIASLMDKCFPA 292
Query: 388 --CPAPFRQFVEYVVNLKFDEEPNY 410
P +++E V L + E+P Y
Sbjct: 293 ANAPGEIAKYMETVKLLDYTEKPLY 317
>pdb|2V62|A Chain A, Structure Of Vaccinia-Related Kinase 2
pdb|2V62|B Chain B, Structure Of Vaccinia-Related Kinase 2
Length = 345
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/290 (31%), Positives = 130/290 (44%), Gaps = 36/290 (12%)
Query: 143 LERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVA----------LKFEHRSSKGCNYG 192
L +K+G GGFG +Y+ P N E+ V+V LKF R +K
Sbjct: 41 LGKKIGSGGFGLIYLA---FPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIK 97
Query: 193 PPYEWQVYNTLGGS--HGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVA 250
E + + LG +G FKGR Y MVM+ LG L + N T V
Sbjct: 98 KWIERKQLDYLGIPLFYGSGLTEFKGR--SYRFMVMERLGIDLQKISGQNG-TFKKSTVL 154
Query: 251 CIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMH 310
+ I + +LE +H YVHGD+K N LLG PD+ ++L D GL+ +R G H
Sbjct: 155 QLGIRMLDVLEYIHENEYVHGDIKAANLLLGYK-NPDQ--VYLADYGLS--YRYCPNGNH 209
Query: 311 VEYDQRPDV-FRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKG 369
+Y + P GT+ + S+ AH G SRR D+E L Y ++ L G+LPW+ +
Sbjct: 210 KQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVA 269
Query: 370 FLVCKKKMAT---------SPDGLCCFCPAPFRQFVEYVVNLKFDEEPNY 410
K + +P G C QF+ +L +DE+PNY
Sbjct: 270 VQTAKTNLLDELPQSVLKWAPSGSSC---CEIAQFLVCAHSLAYDEKPNY 316
>pdb|2JII|A Chain A, Structure Of Vaccinia Related Kinase 3
pdb|2JII|B Chain B, Structure Of Vaccinia Related Kinase 3
Length = 352
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 93/206 (45%), Gaps = 13/206 (6%)
Query: 214 FKGRQGDYYVMVMDMLGPSLWDVWN-NNSHTMSIEMVACIAIEAISILEKMHSKGYVHGD 272
F Q Y +V+ LG SL + + H +S V +A + LE +H YVHG+
Sbjct: 125 FGVHQDKYRFLVLPSLGRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENEYVHGN 184
Query: 273 VKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEY-DQRPDVFRGTVRYASVHA 331
V EN + P D+ ++ L G A +R +G HV Y + G + + S+
Sbjct: 185 VTAENIFVDPE---DQSQVTLAGYGFA--FRYCPSGKHVAYVEGSRSPHEGDLEFISMDL 239
Query: 332 HLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCKKKMATSPDGLCCFC--- 388
H G SRR DL+SL Y ++ L G LPW + + K+K P C
Sbjct: 240 HKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCLPNTEDIMKQKQKFVDKPGPFVGPCGHW 299
Query: 389 ---PAPFRQFVEYVVNLKFDEEPNYA 411
+++++ V+ L ++E+P YA
Sbjct: 300 IRPSETLQKYLKVVMALTYEEKPPYA 325
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 18/169 (10%)
Query: 138 SPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEW 197
S ++++E K+G+G F VY+ A + GP ++ALK +S E
Sbjct: 20 SNVFKIEDKIGEGTFSSVYLA------TAQLQVGPEE-KIALKHLIPTSHPIRIAA--EL 70
Query: 198 QVYNTLGGSHGVPRVHFKGRQGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEA 256
Q GG V V + R+ D+ V+ M L S D+ N ++S + V +
Sbjct: 71 QCLTVAGGQDNVMGVKYCFRKNDHVVIAMPYLEHESFLDILN----SLSFQEVREYMLNL 126
Query: 257 ISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDS 305
L+++H G VH DVKP NFL KK LVD GLA D+
Sbjct: 127 FKALKRIHQFGIVHRDVKPSNFLYN----RRLKKYALVDFGLAQGTHDT 171
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 108/263 (41%), Gaps = 22/263 (8%)
Query: 120 GEDEGSTAPLPEKIAVGGSPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVAL 179
G E S PEKI + L R LGKGG+G+V+ R+V+ N + ++ A+
Sbjct: 1 GSSETSVNRGPEKIR---PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAM 57
Query: 180 KFEHRSSKGCNYGPPYEWQVYNTLGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNN 239
R++K + E + + V ++ G Y+++ + G L+
Sbjct: 58 IV--RNAKDTAHTKA-ERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELF--MQL 112
Query: 240 NSHTMSIEMVACIAIEAISI-LEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGL 298
+ +E AC + IS+ L +H KG ++ D+KPEN +L G + L D GL
Sbjct: 113 EREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQG-----HVKLTDFGL 167
Query: 299 ATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRL 358
+ T H F GT+ Y + + +R D SL + +L G
Sbjct: 168 CKESIHDGTVTH--------TFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAP 219
Query: 359 PWQGYQGENKGFLVCKKKMATSP 381
P+ G + + K K+ P
Sbjct: 220 PFTGENRKKTIDKILKCKLNLPP 242
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 108/263 (41%), Gaps = 22/263 (8%)
Query: 120 GEDEGSTAPLPEKIAVGGSPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVAL 179
G E S PEKI + L R LGKGG+G+V+ R+V+ N + ++ A+
Sbjct: 1 GSSETSVNRGPEKIR---PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAM 57
Query: 180 KFEHRSSKGCNYGPPYEWQVYNTLGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNN 239
R++K + E + + V ++ G Y+++ + G L+
Sbjct: 58 IV--RNAKDTAHTKA-ERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELF--MQL 112
Query: 240 NSHTMSIEMVACIAIEAISI-LEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGL 298
+ +E AC + IS+ L +H KG ++ D+KPEN +L G + L D GL
Sbjct: 113 EREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQG-----HVKLTDFGL 167
Query: 299 ATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRL 358
+ T H F GT+ Y + + +R D SL + +L G
Sbjct: 168 CKESIHDGTVTH--------XFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAP 219
Query: 359 PWQGYQGENKGFLVCKKKMATSP 381
P+ G + + K K+ P
Sbjct: 220 PFTGENRKKTIDKILKCKLNLPP 242
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 105/239 (43%), Gaps = 23/239 (9%)
Query: 141 YRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVA-LKFEHRSSKGCNYGPPYEWQV 199
+ L + LG+G FG+V++ +++S +A + ++ A LK R E
Sbjct: 26 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV-- 83
Query: 200 YNTLGGSHGVPRVHFKGR-QGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAIS 258
+ ++H+ + +G Y+++ + G L+ + + E V E
Sbjct: 84 -----NHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEV-MFTEEDVKFYLAELAL 137
Query: 259 ILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYDQRPD 318
L+ +HS G ++ D+KPEN LL +E + L D GL+ + ++++++
Sbjct: 138 ALDHLHSLGIIYRDLKPENILLD-----EEGHIKLTDFGLSKE--------SIDHEKKAY 184
Query: 319 VFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCKKKM 377
F GTV Y + R ++ D S + +L G LP+QG + ++ K K+
Sbjct: 185 SFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKL 243
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 105/239 (43%), Gaps = 23/239 (9%)
Query: 141 YRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVA-LKFEHRSSKGCNYGPPYEWQV 199
+ L + LG+G FG+V++ +++S +A + ++ A LK R E
Sbjct: 27 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVN- 85
Query: 200 YNTLGGSHGVPRVHFKGR-QGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAIS 258
+ ++H+ + +G Y+++ + G L+ + + E V E
Sbjct: 86 ------HPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEV-MFTEEDVKFYLAELAL 138
Query: 259 ILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYDQRPD 318
L+ +HS G ++ D+KPEN LL +E + L D GL+ + ++++++
Sbjct: 139 ALDHLHSLGIIYRDLKPENILLD-----EEGHIKLTDFGLSKE--------SIDHEKKAY 185
Query: 319 VFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCKKKM 377
F GTV Y + R ++ D S + +L G LP+QG + ++ K K+
Sbjct: 186 SFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKL 244
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 105/239 (43%), Gaps = 23/239 (9%)
Query: 141 YRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVA-LKFEHRSSKGCNYGPPYEWQV 199
+ L + LG+G FG+V++ +++S +A + ++ A LK R E
Sbjct: 26 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVN- 84
Query: 200 YNTLGGSHGVPRVHFKGR-QGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAIS 258
+ ++H+ + +G Y+++ + G L+ + + E V E
Sbjct: 85 ------HPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEV-MFTEEDVKFYLAELAL 137
Query: 259 ILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYDQRPD 318
L+ +HS G ++ D+KPEN LL +E + L D GL+ + ++++++
Sbjct: 138 ALDHLHSLGIIYRDLKPENILLD-----EEGHIKLTDFGLSKE--------SIDHEKKAY 184
Query: 319 VFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCKKKM 377
F GTV Y + R ++ D S + +L G LP+QG + ++ K K+
Sbjct: 185 SFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKL 243
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 106/270 (39%), Gaps = 31/270 (11%)
Query: 124 GSTAPLPEKIAVGGSPMYRLERKL-GKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFE 182
GST LP K MY+L +L G+G + +V VS N E A+K
Sbjct: 1 GSTDSLPGKF----EDMYKLTSELLGEGAYAKVQGA--VSLQNGKE--------YAVKII 46
Query: 183 HRSSKGCNYGPPYEWQ-VYNTLGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNS 241
+ + E + +Y G + + + F +Y++ + G S+
Sbjct: 47 EKQAGHSRSRVFREVETLYQCQGNKNILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQK 106
Query: 242 HTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATK 301
H E + + + + L+ +H+KG H D+KPEN L P K+ DLG K
Sbjct: 107 HFNERE-ASRVVRDVAAALDFLHTKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMK 165
Query: 302 WRDSTTGMHVEYDQRPDVFRGTVRYAS-----VHAHLGRTGSRRDDLESLAYTLIFLLRG 356
+S T + P G+ Y + V +R DL SL L +L G
Sbjct: 166 LNNSCTPITTPELTTP---CGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSG 222
Query: 357 RLPWQGYQGENKGF------LVCKKKMATS 380
P+ G+ G + G+ VC+ K+ S
Sbjct: 223 YPPFVGHCGADCGWDRGEVCRVCQNKLFES 252
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 65/159 (40%), Gaps = 19/159 (11%)
Query: 221 YYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLL 280
+Y++ M G S+ + H +E + + + S L+ +H+KG H D+KPEN L
Sbjct: 86 FYLVFEKMRGGSILSHIHKRRHFNELE-ASVVVQDVASALDFLHNKGIAHRDLKPENILC 144
Query: 281 GPPGTPDEKKLFLVDLGLATKWRDSTTGMHV----------EYDQRPDVFRGTVRYASVH 330
P K+ DLG K + + EY P+V AS++
Sbjct: 145 EHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEY-MAPEVVEAFSEEASIY 203
Query: 331 AHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKG 369
+R DL SL L LL G P+ G G + G
Sbjct: 204 -------DKRCDLWSLGVILYILLSGYPPFVGRCGSDCG 235
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 90/198 (45%), Gaps = 23/198 (11%)
Query: 141 YRLERKLGKGGFGQVYVGRRV-------SPVNANERTGPGAVEVALKFEHRSSKGCNYGP 193
Y L RKLG G F V++ + + + ++ A E +K R + N
Sbjct: 21 YILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKE 80
Query: 194 PYEWQVYNTLGGSHGVPRV-HF--KGRQGDYYVMVMDMLGPSLWDVWNNNSHT-MSIEMV 249
+++G +H + + HF KG G + VMV ++LG +L + H + + V
Sbjct: 81 -------DSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYV 133
Query: 250 ACIAIEAISILEKMHSK-GYVHGDVKPENFLLGPPGTPDEK-KLFLVDLGLATKWRDS-- 305
I+ + + L+ MH + G +H D+KPEN L+ +P+ ++ + DLG A W D
Sbjct: 134 KQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNAC-WYDEHY 192
Query: 306 TTGMHVEYDQRPDVFRGT 323
T + + P+V G
Sbjct: 193 TNSIQTREYRSPEVLLGA 210
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 90/198 (45%), Gaps = 23/198 (11%)
Query: 141 YRLERKLGKGGFGQVYVGRRV-------SPVNANERTGPGAVEVALKFEHRSSKGCNYGP 193
Y L RKLG G F V++ + + + ++ A E +K R + N
Sbjct: 21 YILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKE 80
Query: 194 PYEWQVYNTLGGSHGVPRV-HF--KGRQGDYYVMVMDMLGPSLWDVWNNNSHT-MSIEMV 249
+++G +H + + HF KG G + VMV ++LG +L + H + + V
Sbjct: 81 -------DSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYV 133
Query: 250 ACIAIEAISILEKMHSK-GYVHGDVKPENFLLGPPGTPDEK-KLFLVDLGLATKWRDS-- 305
I+ + + L+ MH + G +H D+KPEN L+ +P+ ++ + DLG A W D
Sbjct: 134 KQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNAC-WYDEHY 192
Query: 306 TTGMHVEYDQRPDVFRGT 323
T + + P+V G
Sbjct: 193 TNSIQTREYRSPEVLLGA 210
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 95/226 (42%), Gaps = 28/226 (12%)
Query: 141 YRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVY 200
Y++ KLG GG VY+ N + A+ + + + + K +E +V+
Sbjct: 13 YKIVDKLGGGGMSTVYLAEDTI---LNIKVAIKAIFIPPREKEETLKR------FEREVH 63
Query: 201 NTLGGSH-GVPRVHFKGRQGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAIS 258
N+ SH + + + D Y +VM+ + GP+L + ++ +S++ + +
Sbjct: 64 NSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHG-PLSVDTAINFTNQILD 122
Query: 259 ILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDS--TTGMHVEYDQR 316
++ H VH D+KP+N L+ K L + D G+A ++ T HV
Sbjct: 123 GIKHAHDMRIVHRDIKPQNILIDS-----NKTLKIFDFGIAKALSETSLTQTNHV----- 172
Query: 317 PDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQG 362
GTV+Y S G D+ S+ L +L G P+ G
Sbjct: 173 ----LGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNG 214
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 105/239 (43%), Gaps = 23/239 (9%)
Query: 141 YRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVA-LKFEHRSSKGCNYGPPYEWQV 199
+ L + LG+G FG+V++ R+V+ ++ ++ A LK R E +
Sbjct: 30 FELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKM------ERDI 83
Query: 200 YNTLGGSHGVPRVHFKGR-QGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAIS 258
+ V ++H+ + +G Y+++ + G L+ + + E V E
Sbjct: 84 LADVNHPF-VVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEV-MFTEEDVKFYLAELAL 141
Query: 259 ILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYDQRPD 318
L+ +HS G ++ D+KPEN LL +E + L D GL+ + ++++++
Sbjct: 142 GLDHLHSLGIIYRDLKPENILLD-----EEGHIKLTDFGLSKEA--------IDHEKKAY 188
Query: 319 VFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCKKKM 377
F GTV Y + + S D S + +L G LP+QG + L+ K K+
Sbjct: 189 SFCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKAKL 247
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 65/140 (46%), Gaps = 8/140 (5%)
Query: 145 RKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNTLG 204
RK+G G FG+V + + + N++ V +K RS+K ++ N
Sbjct: 41 RKMGDGTFGRVLLCQHID----NKKYYAVKVVRNIKKYTRSAK---IEADILKKIQNDDI 93
Query: 205 GSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWN-NNSHTMSIEMVACIAIEAISILEKM 263
++ + + H K D+ ++ + LGPSL+++ NN + IE + IE + L +
Sbjct: 94 NNNNIVKYHGKFMYYDHMCLIFEPLGPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYL 153
Query: 264 HSKGYVHGDVKPENFLLGPP 283
H D+KPEN LL P
Sbjct: 154 RKMSLTHTDLKPENILLDDP 173
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 64/148 (43%), Gaps = 16/148 (10%)
Query: 255 EAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYD 314
E +S LE +H KG +H D+KPEN LL ++ + + D G A +
Sbjct: 143 EIVSALEYLHGKGIIHRDLKPENILLN-----EDMHIQITDFGTAKVLSPESK------Q 191
Query: 315 QRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCK 374
R + F GT +Y S ++ + DL +L + L+ G P++ +L+ +
Sbjct: 192 ARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA----GNEYLIFQ 247
Query: 375 KKMATSPDGLCCFCPAPFRQFVEYVVNL 402
K + D F P R VE ++ L
Sbjct: 248 KIIKLEYDFPAAFFPKA-RDLVEKLLVL 274
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 96/228 (42%), Gaps = 37/228 (16%)
Query: 108 SGGPSNDKANAGG--EDEGSTAPLPEKIAVGGSPMYRLERKLGKGGFGQVY------VGR 159
+GGP+N GG +D+GS +P + Y + + +GKG FGQV V +
Sbjct: 72 TGGPNN-----GGYDDDQGSYVQVPHDHV---AYRYEVLKVIGKGSFGQVVKAYDHKVHQ 123
Query: 160 RVS--PVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNTLGGSHGVPRVHFKGR 217
V+ V +R A E EH + + NT+ H + F+
Sbjct: 124 HVALKMVRNEKRFHRQAAEEIRILEHLRKQDKD----------NTMNVIHMLENFTFR-- 171
Query: 218 QGDYYVMVMDMLGPSLWDVWNNNS-HTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPE 276
++ M ++L +L+++ N S+ +V A + L+ +H +H D+KPE
Sbjct: 172 --NHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPE 229
Query: 277 NFLLGPPGTPDEKKLFLVDLGLAT-KWRDSTTGMHVEYDQRPDVFRGT 323
N LL G K ++D G + + + T + + + P+V G
Sbjct: 230 NILLKQQGRSGIK---VIDFGSSCYEHQRVYTXIQSRFYRAPEVILGA 274
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 96/228 (42%), Gaps = 37/228 (16%)
Query: 108 SGGPSNDKANAGG--EDEGSTAPLPEKIAVGGSPMYRLERKLGKGGFGQVY------VGR 159
+GGP+N GG +D+GS +P + Y + + +GKG FGQV V +
Sbjct: 72 TGGPNN-----GGYDDDQGSYVQVPHDHV---AYRYEVLKVIGKGSFGQVVKAYDHKVHQ 123
Query: 160 RVS--PVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNTLGGSHGVPRVHFKGR 217
V+ V +R A E EH + + NT+ H + F+
Sbjct: 124 HVALKMVRNEKRFHRQAAEEIRILEHLRKQDKD----------NTMNVIHMLENFTFR-- 171
Query: 218 QGDYYVMVMDMLGPSLWDVWNNNS-HTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPE 276
++ M ++L +L+++ N S+ +V A + L+ +H +H D+KPE
Sbjct: 172 --NHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPE 229
Query: 277 NFLLGPPGTPDEKKLFLVDLGLAT-KWRDSTTGMHVEYDQRPDVFRGT 323
N LL G K ++D G + + + T + + + P+V G
Sbjct: 230 NILLKQQGRSGIK---VIDFGSSCYEHQRVYTXIQSRFYRAPEVILGA 274
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 93/243 (38%), Gaps = 58/243 (23%)
Query: 140 MYRLERKLGKGGFGQVYV--------GRRVSPVNANERTGP-----GAVEVALKFEHRSS 186
++ +RKLG G FG V++ R + +N + P +EV +H
Sbjct: 23 LFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDH--- 79
Query: 187 KGCNYGPPYEWQVYNTLGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSH--TM 244
P +++ H + Y VM G L + + + +
Sbjct: 80 -------PNIIKIFEVFEDYHNM-----------YIVMETCEGGELLERIVSAQARGKAL 121
Query: 245 SIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLL--GPPGTPDEKKLFLVDLGLATKW 302
S VA + + ++ L HS+ VH D+KPEN L P +P + ++D GLA +
Sbjct: 122 SEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSP----IKIIDFGLAELF 177
Query: 303 RD---STTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLP 359
+ ST P+VF+ V + + D+ S + FLL G LP
Sbjct: 178 KSDEHSTNAAGTALYMAPEVFKRDVTF-------------KCDIWSAGVVMYFLLTGCLP 224
Query: 360 WQG 362
+ G
Sbjct: 225 FTG 227
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 87/231 (37%), Gaps = 32/231 (13%)
Query: 141 YRLERKLGKGGFGQVYVGR--------RVSPVNANERTGPGAVEVALKFEHRSSKGCNYG 192
Y L LG GG +V++ R V + A+ P L+F +
Sbjct: 14 YELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPS---FYLRFRREAQNAAALN 70
Query: 193 PPYEWQVYNTLGGSHGVPRVHFKGRQGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVAC 251
P VY+T G P G +VM+ + G +L D+ + +
Sbjct: 71 HPAIVAVYDT--GEAETP-------AGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEV 121
Query: 252 IAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHV 311
IA +A L H G +H DVKP N L+ + +VD G+A DS +
Sbjct: 122 IA-DACQALNFSHQNGIIHRDVKPANILISA-----TNAVKVVDFGIARAIADSGNSVX- 174
Query: 312 EYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQG 362
Q V GT +Y S G + R D+ SL L +L G P+ G
Sbjct: 175 ---QTAAVI-GTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTG 221
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 64/159 (40%), Gaps = 19/159 (11%)
Query: 221 YYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLL 280
+Y++ M G S+ + H +E + + + S L+ +H+KG H D+KPEN L
Sbjct: 86 FYLVFEKMRGGSILSHIHKRRHFNELE-ASVVVQDVASALDFLHNKGIAHRDLKPENILC 144
Query: 281 GPPGTPDEKKLFLVDLGLATKWRDSTTGMHV----------EYDQRPDVFRGTVRYASVH 330
P K+ LG K + + EY P+V AS++
Sbjct: 145 EHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEY-MAPEVVEAFSEEASIY 203
Query: 331 AHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKG 369
+R DL SL L LL G P+ G G + G
Sbjct: 204 -------DKRCDLWSLGVILYILLSGYPPFVGRCGSDCG 235
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 67/152 (44%), Gaps = 24/152 (15%)
Query: 141 YRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRS----------SKGCN 190
YRL LGKGGFG V+ G R++ ++VA+K R+ S C
Sbjct: 33 YRLGPLLGKGGFGTVFAGHRLT----------DRLQVAIKVIPRNRVLGWSPLSDSVTCP 82
Query: 191 YGPPYEWQVYNTLGGSHGVPRVH--FKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEM 248
W+V GG GV R+ F+ ++G V+ + L+D + +
Sbjct: 83 LEVALLWKV-GAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFD-YITEKGPLGEGP 140
Query: 249 VACIAIEAISILEKMHSKGYVHGDVKPENFLL 280
C + ++ ++ HS+G VH D+K EN L+
Sbjct: 141 SRCFFGQVVAAIQHCHSRGVVHRDIKDENILI 172
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 50/108 (46%), Gaps = 11/108 (10%)
Query: 255 EAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYD 314
E +S LE +H KG +H D+KPEN LL ++ + + D G A +
Sbjct: 140 EIVSALEYLHGKGIIHRDLKPENILLN-----EDMHIQITDFGTAKVLSPESK------Q 188
Query: 315 QRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQG 362
R + F GT +Y S ++ S+ DL +L + L+ G P++
Sbjct: 189 ARANSFVGTAQYVSPELLTEKSASKSSDLWALGCIIYQLVAGLPPFRA 236
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 85/201 (42%), Gaps = 36/201 (17%)
Query: 108 SGGPSNDKANAGG--EDEGSTAPLPEKIAVGGSPMYRLERKLGKGGFGQVY------VGR 159
+GGP+N GG +D+GS +P + Y + + +GKG FGQV V +
Sbjct: 72 TGGPNN-----GGYDDDQGSYVQVPHDHV---AYRYEVLKVIGKGXFGQVVKAYDHKVHQ 123
Query: 160 RVS--PVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNTLGGSHGVPRVHFKGR 217
V+ V +R A E EH + + NT+ H + F+
Sbjct: 124 HVALKMVRNEKRFHRQAAEEIRILEHLRKQDKD----------NTMNVIHMLENFTFR-- 171
Query: 218 QGDYYVMVMDMLGPSLWDVWNNNS-HTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPE 276
++ M ++L +L+++ N S+ +V A + L+ +H +H D+KPE
Sbjct: 172 --NHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPE 229
Query: 277 NFLLGPPGTPDEKKLFLVDLG 297
N LL G K ++D G
Sbjct: 230 NILLKQQGRSGIK---VIDFG 247
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 89/225 (39%), Gaps = 20/225 (8%)
Query: 138 SPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEW 197
S Y+ +R LGKG FG+V + + ++ TG + K E
Sbjct: 31 SDRYKGQRVLGKGSFGEVILCK-------DKITGQECAVKVISKRQVKQKTDKESLLREV 83
Query: 198 QVYNTLGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAI 257
Q+ L + + F +G +Y++ G L+D + ++ A I + +
Sbjct: 84 QLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVD-AARIIRQVL 142
Query: 258 SILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYDQRP 317
S + MH VH D+KPEN LL + + ++D GL+T H E ++
Sbjct: 143 SGITYMHKNKIVHRDLKPENLLL--ESKSKDANIRIIDFGLST---------HFEASKKM 191
Query: 318 DVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQG 362
GT Y + G T + D+ S L LL G P+ G
Sbjct: 192 KDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNG 235
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 54/120 (45%), Gaps = 14/120 (11%)
Query: 255 EAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYD 314
E +S LE +H KG +H D+KPEN LL ++ + + D G A +
Sbjct: 140 EIVSALEYLHGKGIIHRDLKPENILLN-----EDMHIQITDFGTAKVLSPESK------Q 188
Query: 315 QRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCK 374
R + F GT +Y S ++ + DL +L + L+ G P ++ N+G + K
Sbjct: 189 ARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP---FRAGNEGLIFAK 245
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 101/256 (39%), Gaps = 29/256 (11%)
Query: 108 SGGPSND-KANAGGEDEGSTAPLPEKIAVGGSPMYRLERKLGKGGFGQVYVGRRVSPVNA 166
SGGP + A G + STA ++ Y+ +R LGKG FG+V + +
Sbjct: 25 SGGPGDHLHATPGMFVQHSTAIFSDR--------YKGQRVLGKGSFGEVILCK------- 69
Query: 167 NERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNTLGGSHGVPRVHFKGRQGDYYVMVM 226
++ TG + K E Q+ L + + F +G +Y++
Sbjct: 70 DKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGE 129
Query: 227 DMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTP 286
G L+D + ++ A I + +S + MH VH D+KPEN LL
Sbjct: 130 VYTGGELFDEIISRKRFSEVD-AARIIRQVLSGITYMHKNKIVHRDLKPENLLL--ESKS 186
Query: 287 DEKKLFLVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESL 346
+ + ++D GL+T H E ++ GT Y + G T + D+ S
Sbjct: 187 KDANIRIIDFGLST---------HFEASKKMKDKIGTAYYIAPEVLHG-TYDEKCDVWST 236
Query: 347 AYTLIFLLRGRLPWQG 362
L LL G P+ G
Sbjct: 237 GVILYILLSGCPPFNG 252
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 89/232 (38%), Gaps = 43/232 (18%)
Query: 141 YRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSK-GCNYGPPYEWQV 199
+ + R LGKG FG VY+ R E+ + + + F+ + K G + E ++
Sbjct: 36 FEIGRPLGKGKFGNVYLAR--------EKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 87
Query: 200 YNTL---------GGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVA 250
+ L G H RV Y ++ LG ++ + A
Sbjct: 88 QSHLRHPNILRLYGYFHDATRV--------YLILEYAPLGTVYREL--QKLSKFDEQRTA 137
Query: 251 CIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMH 310
E + L HSK +H D+KPEN LLG G +L + D G W +H
Sbjct: 138 TYITELANALSYCHSKRVIHRDIKPENLLLGSAG-----ELKIADFG----W-----SVH 183
Query: 311 VEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQG 362
+R D+ GT+ Y GR + DL SL L G+ P++
Sbjct: 184 APSSRRDDLC-GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 234
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 54/120 (45%), Gaps = 14/120 (11%)
Query: 255 EAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYD 314
E +S LE +H KG +H D+KPEN LL ++ + + D G A +
Sbjct: 140 EIVSALEYLHGKGIIHRDLKPENILLN-----EDMHIQITDFGTAKVLSPESK------Q 188
Query: 315 QRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCK 374
R + F GT +Y S ++ + DL +L + L+ G P ++ N+G + K
Sbjct: 189 ARANXFVGTAQYVSPELLTEKSAXKSSDLWALGCIIYQLVAGLPP---FRAGNEGLIFAK 245
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 101/256 (39%), Gaps = 29/256 (11%)
Query: 108 SGGPSND-KANAGGEDEGSTAPLPEKIAVGGSPMYRLERKLGKGGFGQVYVGRRVSPVNA 166
SGGP + A G + STA ++ Y+ +R LGKG FG+V + +
Sbjct: 26 SGGPGDHLHATPGMFVQHSTAIFSDR--------YKGQRVLGKGSFGEVILCK------- 70
Query: 167 NERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNTLGGSHGVPRVHFKGRQGDYYVMVM 226
++ TG + K E Q+ L + + F +G +Y++
Sbjct: 71 DKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGE 130
Query: 227 DMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTP 286
G L+D + ++ A I + +S + MH VH D+KPEN LL
Sbjct: 131 VYTGGELFDEIISRKRFSEVD-AARIIRQVLSGITYMHKNKIVHRDLKPENLLL--ESKS 187
Query: 287 DEKKLFLVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESL 346
+ + ++D GL+T H E ++ GT Y + G T + D+ S
Sbjct: 188 KDANIRIIDFGLST---------HFEASKKMKDKIGTAYYIAPEVLHG-TYDEKCDVWST 237
Query: 347 AYTLIFLLRGRLPWQG 362
L LL G P+ G
Sbjct: 238 GVILYILLSGCPPFNG 253
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 89/225 (39%), Gaps = 20/225 (8%)
Query: 138 SPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEW 197
S Y+ +R LGKG FG+V + + ++ TG + K E
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCK-------DKITGQECAVKVISKRQVKQKTDKESLLREV 77
Query: 198 QVYNTLGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAI 257
Q+ L + + F +G +Y++ G L+D + ++ A I + +
Sbjct: 78 QLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVD-AARIIRQVL 136
Query: 258 SILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYDQRP 317
S + MH VH D+KPEN LL + + ++D GL+T H E ++
Sbjct: 137 SGITYMHKNKIVHRDLKPENLLL--ESKSKDANIRIIDFGLST---------HFEASKKM 185
Query: 318 DVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQG 362
GT Y + G T + D+ S L LL G P+ G
Sbjct: 186 KDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNG 229
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 49/108 (45%), Gaps = 11/108 (10%)
Query: 255 EAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYD 314
E +S LE +H KG +H D+KPEN LL ++ + + D G A +
Sbjct: 138 EIVSALEYLHGKGIIHRDLKPENILLN-----EDMHIQITDFGTAKVLSPESK------Q 186
Query: 315 QRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQG 362
R + F GT +Y S ++ + DL +L + L+ G P++
Sbjct: 187 ARANAFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 234
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 98/236 (41%), Gaps = 33/236 (13%)
Query: 141 YRLERKLGKGGFGQVYVG--RRVSPVNANERTGPGAV----EVALKFEHRSSKGCNYGPP 194
+ L + LGKG FG+V++ ++ + A + V +V + + P
Sbjct: 20 FELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHP 79
Query: 195 YEWQVYNTLGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAI 254
+ ++ T F+ ++ ++VM G ++ + + H + A
Sbjct: 80 FLTHMFCT-----------FQTKENLFFVMEYLNGGDLMYHI--QSCHKFDLSRATFYAA 126
Query: 255 EAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYD 314
E I L+ +HSKG V+ D+K +N LL G + + D G+ +++ G D
Sbjct: 127 EIILGLQFLHSKGIVYRDLKLDNILLDKDG-----HIKIADFGMC---KENMLG-----D 173
Query: 315 QRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGF 370
+ + F GT Y + LG+ + D S L +L G+ P+ G Q E + F
Sbjct: 174 AKTNEFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHG-QDEEELF 228
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 90/225 (40%), Gaps = 29/225 (12%)
Query: 141 YRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSK-GCNYGPPYEWQV 199
+ + R LGKG FG VY+ R E+ + + + F+ + K G + E ++
Sbjct: 10 FEIGRPLGKGKFGNVYLAR--------EKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 61
Query: 200 YNTLGGSHGVPRVH--FKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAI 257
+ L + R++ F Y ++ LG ++ + A E
Sbjct: 62 QSHLRHP-NILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELA 118
Query: 258 SILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYDQRP 317
+ L HSK +H D+KPEN LLG G +L + D G W +H +R
Sbjct: 119 NALSYCHSKRVIHRDIKPENLLLGSAG-----ELKIADFG----W-----SVHAPSSRRT 164
Query: 318 DVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQG 362
D+ GT+ Y GR + DL SL L G+ P++
Sbjct: 165 DLC-GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 208
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 49/108 (45%), Gaps = 11/108 (10%)
Query: 255 EAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYD 314
E +S LE +H KG +H D+KPEN LL ++ + + D G A +
Sbjct: 145 EIVSALEYLHGKGIIHRDLKPENILLN-----EDMHIQITDFGTAKVLSPESK------Q 193
Query: 315 QRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQG 362
R + F GT +Y S ++ + DL +L + L+ G P++
Sbjct: 194 ARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 241
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 90/232 (38%), Gaps = 43/232 (18%)
Query: 141 YRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSK-GCNYGPPYEWQV 199
+ + R LGKG FG VY+ R E+ + + + F+ + K G + E ++
Sbjct: 15 FEIGRPLGKGKFGNVYLAR--------EKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 66
Query: 200 YNTL---------GGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVA 250
+ L G H RV Y ++ LG ++ + + A
Sbjct: 67 QSHLRHPNILRLYGYFHDATRV--------YLILEYAPLGTVYRELQKLSK--FDEQRTA 116
Query: 251 CIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMH 310
E + L HSK +H D+KPEN LLG G +L + D G W +H
Sbjct: 117 TYITELANALSYCHSKRVIHRDIKPENLLLGSAG-----ELKIADFG----W-----SVH 162
Query: 311 VEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQG 362
+R D+ GT+ Y GR + DL SL L G+ P++
Sbjct: 163 APSSRRTDLC-GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 213
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 89/232 (38%), Gaps = 43/232 (18%)
Query: 141 YRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSK-GCNYGPPYEWQV 199
+ + R LGKG FG VY+ R E+ + + + F+ + K G + E ++
Sbjct: 11 FEIGRPLGKGKFGNVYLAR--------EKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 62
Query: 200 YNTL---------GGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVA 250
+ L G H RV Y ++ LG ++ + A
Sbjct: 63 QSHLRHPNILRLYGYFHDATRV--------YLILEYAPLGTVYREL--QKLSKFDEQRTA 112
Query: 251 CIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMH 310
E + L HSK +H D+KPEN LLG G +L + D G W +H
Sbjct: 113 TYITELANALSYCHSKRVIHRDIKPENLLLGSAG-----ELKIADFG----W-----SVH 158
Query: 311 VEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQG 362
+R D+ GT+ Y GR + DL SL L G+ P++
Sbjct: 159 APSSRRTDLC-GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 209
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 93/223 (41%), Gaps = 27/223 (12%)
Query: 141 YRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNY-GPPYEWQV 199
Y L +G GGF +V + + TG VA+K +++ G + E +
Sbjct: 12 YELHETIGTGGFAKVKLACHI-------LTGEM---VAIKIMDKNTLGSDLPRIKTEIEA 61
Query: 200 YNTLGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISI 259
L H H ++++ G L+D + + +S E + + +S
Sbjct: 62 LKNLRHQHICQLYHVLETANKIFMVLEYCPGGELFD-YIISQDRLSEEETRVVFRQIVSA 120
Query: 260 LEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYDQRPDV 319
+ +HS+GY H D+KPEN L + KL L+D GL K + + D
Sbjct: 121 VAYVHSQGYAHRDLKPENLLFD-----EYHKLKLIDFGLCAKPKGNK-------DYHLQT 168
Query: 320 FRGTVRYASVHAHLGRT--GSRRDDLESLAYTLIFLLRGRLPW 360
G++ YA+ G++ GS D+ S+ L L+ G LP+
Sbjct: 169 CCGSLAYAAPELIQGKSYLGSEA-DVWSMGILLYVLMCGFLPF 210
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 64/148 (43%), Gaps = 16/148 (10%)
Query: 255 EAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYD 314
E +S LE +H KG +H D+KPEN LL ++ + + D G A +
Sbjct: 138 EIVSALEYLHGKGIIHRDLKPENILLN-----EDMHIQITDFGTAKVLSPESK------Q 186
Query: 315 QRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCK 374
R + F GT +Y S ++ + DL +L + L+ G P++ +L+ +
Sbjct: 187 ARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA----GNEYLIFQ 242
Query: 375 KKMATSPDGLCCFCPAPFRQFVEYVVNL 402
K + D F P R VE ++ L
Sbjct: 243 KIIKLEYDFPEKFFPKA-RDLVEKLLVL 269
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 49/108 (45%), Gaps = 11/108 (10%)
Query: 255 EAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYD 314
E +S LE +H KG +H D+KPEN LL ++ + + D G A +
Sbjct: 141 EIVSALEYLHGKGIIHRDLKPENILLN-----EDMHIQITDFGTAKVLSPESK------Q 189
Query: 315 QRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQG 362
R + F GT +Y S ++ + DL +L + L+ G P++
Sbjct: 190 ARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 237
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 49/108 (45%), Gaps = 11/108 (10%)
Query: 255 EAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYD 314
E +S LE +H KG +H D+KPEN LL ++ + + D G A +
Sbjct: 140 EIVSALEYLHGKGIIHRDLKPENILLN-----EDMHIQITDFGTAKVLSPESK------Q 188
Query: 315 QRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQG 362
R + F GT +Y S ++ + DL +L + L+ G P++
Sbjct: 189 ARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 236
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 64/148 (43%), Gaps = 16/148 (10%)
Query: 255 EAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYD 314
E +S LE +H KG +H D+KPEN LL ++ + + D G A +
Sbjct: 140 EIVSALEYLHGKGIIHRDLKPENILLN-----EDMHIQITDFGTAKVLSPESK------Q 188
Query: 315 QRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCK 374
R + F GT +Y S ++ + DL +L + L+ G P++ +L+ +
Sbjct: 189 ARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA----GNEYLIFQ 244
Query: 375 KKMATSPDGLCCFCPAPFRQFVEYVVNL 402
K + D F P R VE ++ L
Sbjct: 245 KIIKLEYDFPEKFFPKA-RDLVEKLLVL 271
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 64/148 (43%), Gaps = 16/148 (10%)
Query: 255 EAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYD 314
E +S LE +H KG +H D+KPEN LL ++ + + D G A +
Sbjct: 140 EIVSALEYLHGKGIIHRDLKPENILLN-----EDMHIQITDFGTAKVLSPESK------Q 188
Query: 315 QRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCK 374
R + F GT +Y S ++ + DL +L + L+ G P++ +L+ +
Sbjct: 189 ARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA----GNEYLIFQ 244
Query: 375 KKMATSPDGLCCFCPAPFRQFVEYVVNL 402
K + D F P R VE ++ L
Sbjct: 245 KIIKLEYDFPEKFFPKA-RDLVEKLLVL 271
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 64/148 (43%), Gaps = 16/148 (10%)
Query: 255 EAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYD 314
E +S LE +H KG +H D+KPEN LL ++ + + D G A +
Sbjct: 138 EIVSALEYLHGKGIIHRDLKPENILLN-----EDMHIQITDFGTAKVLSPESK------Q 186
Query: 315 QRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCK 374
R + F GT +Y S ++ + DL +L + L+ G P++ +L+ +
Sbjct: 187 ARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA----GNEYLIFQ 242
Query: 375 KKMATSPDGLCCFCPAPFRQFVEYVVNL 402
K + D F P R VE ++ L
Sbjct: 243 KIIKLEYDFPEKFFPKA-RDLVEKLLVL 269
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 64/148 (43%), Gaps = 16/148 (10%)
Query: 255 EAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYD 314
E +S LE +H KG +H D+KPEN LL ++ + + D G A +
Sbjct: 138 EIVSALEYLHGKGIIHRDLKPENILLN-----EDMHIQITDFGTAKVLSPESK------Q 186
Query: 315 QRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCK 374
R + F GT +Y S ++ + DL +L + L+ G P++ +L+ +
Sbjct: 187 ARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA----GNEYLIFQ 242
Query: 375 KKMATSPDGLCCFCPAPFRQFVEYVVNL 402
K + D F P R VE ++ L
Sbjct: 243 KIIKLEYDFPEKFFPKA-RDLVEKLLVL 269
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 84/193 (43%), Gaps = 31/193 (16%)
Query: 141 YRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFE--HRSSKGCNYGPPYEWQ 198
Y + + +G+G FG+V + R S A+++ KFE RS + W+
Sbjct: 71 YEVVKVIGRGAFGEVQLVRHKSTRKVY------AMKLLSKFEMIKRSDSA------FFWE 118
Query: 199 VYNTLGGSHG--VPRVHFKGRQGDYYVMVMD-MLGPSLWDVWNNNSHTMSIEMVACIAIE 255
+ + ++ V ++ + + Y MVM+ M G L ++ +N + + + E
Sbjct: 119 ERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSN--YDVPEKWARFYTAE 176
Query: 256 AISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYDQ 315
+ L+ +HS G++H DVKP+N LL G L L D G K M+ E
Sbjct: 177 VVLALDAIHSMGFIHRDVKPDNMLLDKSG-----HLKLADFGTCMK-------MNKEGMV 224
Query: 316 RPDVFRGTVRYAS 328
R D GT Y S
Sbjct: 225 RCDTAVGTPDYIS 237
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 90/225 (40%), Gaps = 29/225 (12%)
Query: 141 YRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSK-GCNYGPPYEWQV 199
+ + R LGKG FG VY+ R E+ + + + F+ + K G + E ++
Sbjct: 10 FEIGRPLGKGKFGNVYLAR--------EKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 61
Query: 200 YNTLGGSHGVPRVH--FKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAI 257
+ L + R++ F Y ++ LG ++ + A E
Sbjct: 62 QSHLRHP-NILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELA 118
Query: 258 SILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYDQRP 317
+ L HSK +H D+KPEN LLG G +L + D G W +H +R
Sbjct: 119 NALSYCHSKRVIHRDIKPENLLLGSAG-----ELKIADFG----W-----SVHAPSSRRT 164
Query: 318 DVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQG 362
D+ GT+ Y GR + DL SL L G+ P++
Sbjct: 165 DLC-GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 208
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 98/236 (41%), Gaps = 33/236 (13%)
Query: 141 YRLERKLGKGGFGQVYVG--RRVSPVNANERTGPGAV----EVALKFEHRSSKGCNYGPP 194
+ L + LGKG FG+V++ ++ + A + V +V + + P
Sbjct: 19 FILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHP 78
Query: 195 YEWQVYNTLGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAI 254
+ ++ T F+ ++ ++VM G ++ + + H + A
Sbjct: 79 FLTHMFCT-----------FQTKENLFFVMEYLNGGDLMYHI--QSCHKFDLSRATFYAA 125
Query: 255 EAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYD 314
E I L+ +HSKG V+ D+K +N LL G + + D G+ +++ G D
Sbjct: 126 EIILGLQFLHSKGIVYRDLKLDNILLDKDG-----HIKIADFGMC---KENMLG-----D 172
Query: 315 QRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGF 370
+ + F GT Y + LG+ + D S L +L G+ P+ G Q E + F
Sbjct: 173 AKTNXFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHG-QDEEELF 227
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 49/108 (45%), Gaps = 11/108 (10%)
Query: 255 EAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYD 314
E +S LE +H KG +H D+KPEN LL ++ + + D G A +
Sbjct: 118 EIVSALEYLHGKGIIHRDLKPENILLN-----EDMHIQITDFGTAKVLSPESK------Q 166
Query: 315 QRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQG 362
R + F GT +Y S ++ + DL +L + L+ G P++
Sbjct: 167 ARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 214
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 84/193 (43%), Gaps = 31/193 (16%)
Query: 141 YRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFE--HRSSKGCNYGPPYEWQ 198
Y + + +G+G FG+V + R S A+++ KFE RS + W+
Sbjct: 76 YEVVKVIGRGAFGEVQLVRHKSTRKVY------AMKLLSKFEMIKRSDSA------FFWE 123
Query: 199 VYNTLGGSHG--VPRVHFKGRQGDYYVMVMD-MLGPSLWDVWNNNSHTMSIEMVACIAIE 255
+ + ++ V ++ + + Y MVM+ M G L ++ +N + + + E
Sbjct: 124 ERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSN--YDVPEKWARFYTAE 181
Query: 256 AISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYDQ 315
+ L+ +HS G++H DVKP+N LL G L L D G K M+ E
Sbjct: 182 VVLALDAIHSMGFIHRDVKPDNMLLDKSG-----HLKLADFGTCMK-------MNKEGMV 229
Query: 316 RPDVFRGTVRYAS 328
R D GT Y S
Sbjct: 230 RCDTAVGTPDYIS 242
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 49/108 (45%), Gaps = 11/108 (10%)
Query: 255 EAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYD 314
E +S LE +H KG +H D+KPEN LL ++ + + D G A +
Sbjct: 117 EIVSALEYLHGKGIIHRDLKPENILLN-----EDMHIQITDFGTAKVLSPESK------Q 165
Query: 315 QRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQG 362
R + F GT +Y S ++ + DL +L + L+ G P++
Sbjct: 166 ARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 213
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 88/232 (37%), Gaps = 43/232 (18%)
Query: 141 YRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSK-GCNYGPPYEWQV 199
+ + R LGKG FG VY+ R E+ + + + F+ + K G + E ++
Sbjct: 11 FEIGRPLGKGKFGNVYLAR--------EKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 62
Query: 200 YNTL---------GGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVA 250
+ L G H RV Y ++ LG ++ + A
Sbjct: 63 QSHLRHPNILRLYGYFHDATRV--------YLILEYAPLGTVYREL--QKLSKFDEQRTA 112
Query: 251 CIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMH 310
E + L HSK +H D+KPEN LLG G +L + D G W +H
Sbjct: 113 TYITELANALSYCHSKRVIHRDIKPENLLLGSAG-----ELKIADFG----W-----SVH 158
Query: 311 VEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQG 362
+R D GT+ Y GR + DL SL L G+ P++
Sbjct: 159 APSSRR-DTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 209
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 92/229 (40%), Gaps = 29/229 (12%)
Query: 138 SPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSS--KGCNYGPPY 195
S MY+ +KLG G +G+V + R VE A+K ++S N
Sbjct: 36 SEMYQRVKKLGSGAYGEVLLCR----------DKVTHVERAIKIIRKTSVSTSSNSKLLE 85
Query: 196 EWQVYNTLGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMV--ACIA 253
E V L + + F + +YY+++ G L+D H M V A I
Sbjct: 86 EVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFD---EIIHRMKFNEVDAAVII 142
Query: 254 IEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEY 313
+ +S + +H VH D+KPEN LL + + +VD GL+ + E
Sbjct: 143 KQVLSGVTYLHKHNIVHRDLKPENLLL--ESKEKDALIKIVDFGLSAVF---------EN 191
Query: 314 DQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQG 362
++ GT Y + L + + D+ S+ L LL G P+ G
Sbjct: 192 QKKMKERLGTAYYIAPEV-LRKKYDEKCDVWSIGVILFILLAGYPPFGG 239
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 49/108 (45%), Gaps = 11/108 (10%)
Query: 255 EAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYD 314
E +S LE +H KG +H D+KPEN LL ++ + + D G A +
Sbjct: 141 EIVSALEYLHGKGIIHRDLKPENILLN-----EDMHIQITDFGTAKVLSPESK------Q 189
Query: 315 QRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQG 362
R + F GT +Y S ++ + DL +L + L+ G P++
Sbjct: 190 ARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 237
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 49/108 (45%), Gaps = 11/108 (10%)
Query: 255 EAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYD 314
E +S LE +H KG +H D+KPEN LL ++ + + D G A +
Sbjct: 116 EIVSALEYLHGKGIIHRDLKPENILLN-----EDMHIQITDFGTAKVLSPESK------Q 164
Query: 315 QRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQG 362
R + F GT +Y S ++ + DL +L + L+ G P++
Sbjct: 165 ARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 212
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 85/223 (38%), Gaps = 24/223 (10%)
Query: 141 YRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVY 200
Y + +LG G FG V+ RV+ TG + H S K E Q
Sbjct: 159 YDIHEELGTGAFGVVH---RVT----ERATGNNFAAKFVMTPHESDKETVRK---EIQTM 208
Query: 201 NTLGGSHGVPRVHFKGRQGDYYVMVMD-MLGPSLWDVWNNNSHTMSIEMVACIAIEAISI 259
+ L V +H + VM+ + M G L++ + + MS + +
Sbjct: 209 SVLRHPTLV-NLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKG 267
Query: 260 LEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYDQRPDV 319
L MH YVH D+KPEN + T +L L+D GL H++ Q V
Sbjct: 268 LCHMHENNYVHLDLKPENIMF---TTKRSNELKLIDFGLTA---------HLDPKQSVKV 315
Query: 320 FRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQG 362
GT +A+ G+ D+ S+ LL G P+ G
Sbjct: 316 TTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGG 358
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 64/148 (43%), Gaps = 16/148 (10%)
Query: 255 EAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYD 314
E +S LE +H KG +H D+KPEN LL ++ + + D G A +
Sbjct: 137 EIVSALEYLHGKGIIHRDLKPENILLN-----EDMHIQITDFGTAKVLSPESK------Q 185
Query: 315 QRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCK 374
R + F GT +Y S ++ + DL +L + L+ G P++ +L+ +
Sbjct: 186 ARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA----GNEYLIFQ 241
Query: 375 KKMATSPDGLCCFCPAPFRQFVEYVVNL 402
K + D F P R VE ++ L
Sbjct: 242 KIIKLEYDFPEKFFPKA-RDLVEKLLVL 268
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 84/193 (43%), Gaps = 31/193 (16%)
Query: 141 YRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFE--HRSSKGCNYGPPYEWQ 198
Y + + +G+G FG+V + R S A+++ KFE RS + W+
Sbjct: 76 YEVVKVIGRGAFGEVQLVRHKSTRKVY------AMKLLSKFEMIKRSDSA------FFWE 123
Query: 199 VYNTLGGSHG--VPRVHFKGRQGDYYVMVMD-MLGPSLWDVWNNNSHTMSIEMVACIAIE 255
+ + ++ V ++ + + Y MVM+ M G L ++ +N + + + E
Sbjct: 124 ERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSN--YDVPEKWARFYTAE 181
Query: 256 AISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYDQ 315
+ L+ +HS G++H DVKP+N LL G L L D G K M+ E
Sbjct: 182 VVLALDAIHSMGFIHRDVKPDNMLLDKSG-----HLKLADFGTCMK-------MNKEGMV 229
Query: 316 RPDVFRGTVRYAS 328
R D GT Y S
Sbjct: 230 RCDTAVGTPDYIS 242
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 49/108 (45%), Gaps = 11/108 (10%)
Query: 255 EAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYD 314
E +S LE +H KG +H D+KPEN LL ++ + + D G A +
Sbjct: 115 EIVSALEYLHGKGIIHRDLKPENILLN-----EDMHIQITDFGTAKVLSPESK------Q 163
Query: 315 QRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQG 362
R + F GT +Y S ++ + DL +L + L+ G P++
Sbjct: 164 ARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 211
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 87/231 (37%), Gaps = 32/231 (13%)
Query: 141 YRLERKLGKGGFGQVYVGR--------RVSPVNANERTGPGAVEVALKFEHRSSKGCNYG 192
Y L LG GG +V++ R V + A+ P L+F +
Sbjct: 14 YELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPS---FYLRFRREAQNAAALN 70
Query: 193 PPYEWQVYNTLGGSHGVPRVHFKGRQGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVAC 251
P VY+T G P G +VM+ + G +L D+ + +
Sbjct: 71 HPAIVAVYDT--GEAETP-------AGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEV 121
Query: 252 IAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHV 311
IA +A L H G +H DVKP N ++ + ++D G+A DS +
Sbjct: 122 IA-DACQALNFSHQNGIIHRDVKPANIMISA-----TNAVKVMDFGIARAIADSGNSV-- 173
Query: 312 EYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQG 362
Q V GT +Y S G + R D+ SL L +L G P+ G
Sbjct: 174 --TQTAAVI-GTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTG 221
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 49/108 (45%), Gaps = 11/108 (10%)
Query: 255 EAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYD 314
E +S LE +H KG +H D+KPEN LL ++ + + D G A +
Sbjct: 122 EIVSALEYLHGKGIIHRDLKPENILLN-----EDMHIQITDFGTAKVLSPESK------Q 170
Query: 315 QRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQG 362
R + F GT +Y S ++ + DL +L + L+ G P++
Sbjct: 171 ARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 218
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 87/231 (37%), Gaps = 32/231 (13%)
Query: 141 YRLERKLGKGGFGQVYVGR--------RVSPVNANERTGPGAVEVALKFEHRSSKGCNYG 192
Y L LG GG +V++ R V + A+ P L+F +
Sbjct: 14 YELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPS---FYLRFRREAQNAAALN 70
Query: 193 PPYEWQVYNTLGGSHGVPRVHFKGRQGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVAC 251
P VY+T G P G +VM+ + G +L D+ + +
Sbjct: 71 HPAIVAVYDT--GEAETP-------AGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEV 121
Query: 252 IAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHV 311
IA +A L H G +H DVKP N ++ + ++D G+A DS +
Sbjct: 122 IA-DACQALNFSHQNGIIHRDVKPANIMISA-----TNAVKVMDFGIARAIADSGNSV-- 173
Query: 312 EYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQG 362
Q V GT +Y S G + R D+ SL L +L G P+ G
Sbjct: 174 --TQTAAVI-GTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTG 221
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 87/231 (37%), Gaps = 32/231 (13%)
Query: 141 YRLERKLGKGGFGQVYVGR--------RVSPVNANERTGPGAVEVALKFEHRSSKGCNYG 192
Y L LG GG +V++ R V + A+ P L+F +
Sbjct: 14 YELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPS---FYLRFRREAQNAAALN 70
Query: 193 PPYEWQVYNTLGGSHGVPRVHFKGRQGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVAC 251
P VY+T G P G +VM+ + G +L D+ + +
Sbjct: 71 HPAIVAVYDT--GEAETP-------AGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEV 121
Query: 252 IAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHV 311
IA +A L H G +H DVKP N ++ + ++D G+A DS +
Sbjct: 122 IA-DACQALNFSHQNGIIHRDVKPANIMISA-----TNAVKVMDFGIARAIADSGNSV-- 173
Query: 312 EYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQG 362
Q V GT +Y S G + R D+ SL L +L G P+ G
Sbjct: 174 --TQTAAVI-GTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTG 221
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 64/148 (43%), Gaps = 16/148 (10%)
Query: 255 EAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYD 314
E +S LE +H KG +H D+KPEN LL ++ + + D G A +
Sbjct: 137 EIVSALEYLHGKGIIHRDLKPENILLN-----EDMHIQITDFGTAKVLSPESK------Q 185
Query: 315 QRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCK 374
R + F GT +Y S ++ + DL +L + L+ G P++ +L+ +
Sbjct: 186 ARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA----GNEYLIFQ 241
Query: 375 KKMATSPDGLCCFCPAPFRQFVEYVVNL 402
K + D F P R VE ++ L
Sbjct: 242 KIIKLEYDFPEKFFPKA-RDLVEKLLVL 268
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 80/199 (40%), Gaps = 29/199 (14%)
Query: 141 YRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVY 200
Y + +G G FG VY + ++ E V +F++R E Q+
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLC---DSGELVAIKKVLQDKRFKNR-----------ELQIM 101
Query: 201 NTLGGSHGVPRVHF---KGRQGD--YYVMVMDMLGPSLWDV---WNNNSHTMSIEMVACI 252
L + V +F G + D Y +V+D + +++ V ++ T+ + V
Sbjct: 102 RKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY 161
Query: 253 AIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKW---RDSTTGM 309
+ L +HS G H D+KP+N LL PD L L D G A + + + +
Sbjct: 162 MYQLFRSLAYIHSFGICHRDIKPQNLLLD----PDTAVLKLCDFGSAKQLVRGEPNVSXI 217
Query: 310 HVEYDQRPDVFRGTVRYAS 328
Y + P++ G Y S
Sbjct: 218 CSRYYRAPELIFGATDYTS 236
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 87/224 (38%), Gaps = 26/224 (11%)
Query: 141 YRLERKLGKGGFGQVYVGRRVSPVNANER-TGPGAVEVALKFEHRSSKGCNYGPPYEWQV 199
Y + +LG G FG V+ RV+ ER TG + H S K E Q
Sbjct: 53 YDIHEELGTGAFGVVH---RVT-----ERATGNNFAAKFVMTPHESDKETVRK---EIQT 101
Query: 200 YNTLGGSHGVPRVHFKGRQGDYYVMVMD-MLGPSLWDVWNNNSHTMSIEMVACIAIEAIS 258
+ L V +H + VM+ + M G L++ + + MS + +
Sbjct: 102 MSVLRHPTLV-NLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCK 160
Query: 259 ILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYDQRPD 318
L MH YVH D+KPEN + T +L L+D GL H++ Q
Sbjct: 161 GLCHMHENNYVHLDLKPENIMF---TTKRSNELKLIDFGLTA---------HLDPKQSVK 208
Query: 319 VFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQG 362
V GT +A+ G+ D+ S+ LL G P+ G
Sbjct: 209 VTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGG 252
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 80/199 (40%), Gaps = 29/199 (14%)
Query: 141 YRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVY 200
Y + +G G FG VY + ++ E V +F++R E Q+
Sbjct: 30 YTDTKVIGNGSFGVVYQAKLC---DSGELVAIKKVLQDKRFKNR-----------ELQIM 75
Query: 201 NTLGGSHGVPRVHF---KGRQGD--YYVMVMDMLGPSLWDV---WNNNSHTMSIEMVACI 252
L + V +F G + D Y +V+D + +++ V ++ T+ + V
Sbjct: 76 RKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY 135
Query: 253 AIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKW---RDSTTGM 309
+ L +HS G H D+KP+N LL PD L L D G A + + + +
Sbjct: 136 MYQLFRSLAYIHSFGICHRDIKPQNLLLD----PDTAVLKLCDFGSAKQLVRGEPNVSXI 191
Query: 310 HVEYDQRPDVFRGTVRYAS 328
Y + P++ G Y S
Sbjct: 192 CSRYYRAPELIFGATDYTS 210
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 80/199 (40%), Gaps = 29/199 (14%)
Query: 141 YRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVY 200
Y + +G G FG VY + ++ E V +F++R E Q+
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLC---DSGELVAIKKVLQDKRFKNR-----------ELQIM 79
Query: 201 NTLGGSHGVPRVHF---KGRQGD--YYVMVMDMLGPSLWDV---WNNNSHTMSIEMVACI 252
L + V +F G + D Y +V+D + +++ V ++ T+ + V
Sbjct: 80 RKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY 139
Query: 253 AIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKW---RDSTTGM 309
+ L +HS G H D+KP+N LL PD L L D G A + + + +
Sbjct: 140 MYQLFRSLAYIHSFGICHRDIKPQNLLLD----PDTAVLKLCDFGSAKQLVRGEPNVSXI 195
Query: 310 HVEYDQRPDVFRGTVRYAS 328
Y + P++ G Y S
Sbjct: 196 CSRYYRAPELIFGATDYTS 214
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 80/199 (40%), Gaps = 29/199 (14%)
Query: 141 YRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVY 200
Y + +G G FG VY + ++ E V +F++R E Q+
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLC---DSGELVAIKKVLQDKRFKNR-----------ELQIM 79
Query: 201 NTLGGSHGVPRVHF---KGRQGD--YYVMVMDMLGPSLWDV---WNNNSHTMSIEMVACI 252
L + V +F G + D Y +V+D + +++ V ++ T+ + V
Sbjct: 80 RKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY 139
Query: 253 AIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKW---RDSTTGM 309
+ L +HS G H D+KP+N LL PD L L D G A + + + +
Sbjct: 140 MYQLFRSLAYIHSFGICHRDIKPQNLLLD----PDTAVLKLCDFGSAKQLVRGEPNVSXI 195
Query: 310 HVEYDQRPDVFRGTVRYAS 328
Y + P++ G Y S
Sbjct: 196 CSRYYRAPELIFGATDYTS 214
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 88/234 (37%), Gaps = 32/234 (13%)
Query: 138 SPMYRLERKLGKGGFGQVYVGR--------RVSPVNANERTGPGAVEVALKFEHRSSKGC 189
S Y L LG GG +V++ R V + A+ P L+F +
Sbjct: 28 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPS---FYLRFRREAQNAA 84
Query: 190 NYGPPYEWQVYNTLGGSHGVPRVHFKGRQGDYYVMVMDML-GPSLWDVWNNNSHTMSIEM 248
P VY+T G P G +VM+ + G +L D+ +
Sbjct: 85 ALNHPAIVAVYDT--GEAETP-------AGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRA 135
Query: 249 VACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTG 308
+ IA +A L H G +H DVKP N ++ + ++D G+A DS
Sbjct: 136 IEVIA-DACQALNFSHQNGIIHRDVKPANIMISA-----TNAVKVMDFGIARAIADSGNS 189
Query: 309 MHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQG 362
+ Q V GT +Y S G + R D+ SL L +L G P+ G
Sbjct: 190 V----TQTAAVI-GTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTG 238
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 6/100 (6%)
Query: 209 VPRVHFKGRQGDYYVMVMDM-LGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKG 267
+ ++HF + +Y +VM+ +G L + + + EM E + ++ +H G
Sbjct: 123 ITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLG 182
Query: 268 YVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTT 307
YVH D+KP+N LL G + L D G K R T
Sbjct: 183 YVHRDIKPDNILLDRCG-----HIRLADFGSCLKLRADGT 217
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 80/199 (40%), Gaps = 29/199 (14%)
Query: 141 YRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVY 200
Y + +G G FG VY + ++ E V +F++R E Q+
Sbjct: 41 YTDTKVIGNGSFGVVYQAKLC---DSGELVAIKKVLQDKRFKNR-----------ELQIM 86
Query: 201 NTLGGSHGVPRVHF---KGRQGD--YYVMVMDMLGPSLWDV---WNNNSHTMSIEMVACI 252
L + V +F G + D Y +V+D + +++ V ++ T+ + V
Sbjct: 87 RKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY 146
Query: 253 AIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKW---RDSTTGM 309
+ L +HS G H D+KP+N LL PD L L D G A + + + +
Sbjct: 147 MYQLFRSLAYIHSFGICHRDIKPQNLLLD----PDTAVLKLCDFGSAKQLVRGEPNVSXI 202
Query: 310 HVEYDQRPDVFRGTVRYAS 328
Y + P++ G Y S
Sbjct: 203 CSRYYRAPELIFGATDYTS 221
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 80/199 (40%), Gaps = 29/199 (14%)
Query: 141 YRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVY 200
Y + +G G FG VY + ++ E V +F++R E Q+
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLC---DSGELVAIKKVLQDKRFKNR-----------ELQIM 67
Query: 201 NTLGGSHGVPRVHF---KGRQGD--YYVMVMDMLGPSLWDV---WNNNSHTMSIEMVACI 252
L + V +F G + D Y +V+D + +++ V ++ T+ + V
Sbjct: 68 RKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY 127
Query: 253 AIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKW---RDSTTGM 309
+ L +HS G H D+KP+N LL PD L L D G A + + + +
Sbjct: 128 MYQLFRSLAYIHSFGICHRDIKPQNLLLD----PDTAVLKLCDFGSAKQLVRGEPNVSXI 183
Query: 310 HVEYDQRPDVFRGTVRYAS 328
Y + P++ G Y S
Sbjct: 184 CSRYYRAPELIFGATDYTS 202
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 80/199 (40%), Gaps = 29/199 (14%)
Query: 141 YRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVY 200
Y + +G G FG VY + ++ E V +F++R E Q+
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLC---DSGELVAIKKVLQDKRFKNR-----------ELQIM 67
Query: 201 NTLGGSHGVPRVHF---KGRQGD--YYVMVMDMLGPSLWDV---WNNNSHTMSIEMVACI 252
L + V +F G + D Y +V+D + +++ V ++ T+ + V
Sbjct: 68 RKLDHCNIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY 127
Query: 253 AIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKW---RDSTTGM 309
+ L +HS G H D+KP+N LL PD L L D G A + + + +
Sbjct: 128 MYQLFRSLAYIHSFGICHRDIKPQNLLLD----PDTAVLKLCDFGSAKQLVRGEPNVSXI 183
Query: 310 HVEYDQRPDVFRGTVRYAS 328
Y + P++ G Y S
Sbjct: 184 CSRYYRAPELIFGATDYTS 202
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 91/225 (40%), Gaps = 29/225 (12%)
Query: 141 YRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSK-GCNYGPPYEWQV 199
+ + R LGKG FG VY+ R E+ + + + F+ + K G + E ++
Sbjct: 13 FEIGRPLGKGKFGNVYLAR--------EKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 64
Query: 200 YNTLGGSHGVPRVH--FKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAI 257
+ L + + R++ F Y ++ LG ++ + A E
Sbjct: 65 QSHLRHPN-ILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELA 121
Query: 258 SILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYDQRP 317
+ L HSK +H D+KPEN LLG G +L + D G W +H +R
Sbjct: 122 NALSYCHSKRVIHRDIKPENLLLGSAG-----ELKIADFG----W-----SVHAPSSRRD 167
Query: 318 DVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQG 362
D+ GT+ Y GR + DL SL L G+ P++
Sbjct: 168 DLC-GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 211
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 80/199 (40%), Gaps = 29/199 (14%)
Query: 141 YRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVY 200
Y + +G G FG VY + ++ E V +F++R E Q+
Sbjct: 26 YTDTKVIGNGSFGVVYQAKLC---DSGELVAIKKVLQDKRFKNR-----------ELQIM 71
Query: 201 NTLGGSHGVPRVHF---KGRQGD--YYVMVMDMLGPSLWDV---WNNNSHTMSIEMVACI 252
L + V +F G + D Y +V+D + +++ V ++ T+ + V
Sbjct: 72 RKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY 131
Query: 253 AIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKW---RDSTTGM 309
+ L +HS G H D+KP+N LL PD L L D G A + + + +
Sbjct: 132 MYQLFRSLAYIHSFGICHRDIKPQNLLLD----PDTAVLKLCDFGSAKQLVRGEPNVSXI 187
Query: 310 HVEYDQRPDVFRGTVRYAS 328
Y + P++ G Y S
Sbjct: 188 CSRYYRAPELIFGATDYTS 206
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 80/199 (40%), Gaps = 29/199 (14%)
Query: 141 YRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVY 200
Y + +G G FG VY + ++ E V +F++R E Q+
Sbjct: 23 YTDTKVIGNGSFGVVYQAKLC---DSGELVAIKKVLQDKRFKNR-----------ELQIM 68
Query: 201 NTLGGSHGVPRVHF---KGRQGD--YYVMVMDMLGPSLWDV---WNNNSHTMSIEMVACI 252
L + V +F G + D Y +V+D + +++ V ++ T+ + V
Sbjct: 69 RKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY 128
Query: 253 AIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKW---RDSTTGM 309
+ L +HS G H D+KP+N LL PD L L D G A + + + +
Sbjct: 129 MYQLFRSLAYIHSFGICHRDIKPQNLLLD----PDTAVLKLCDFGSAKQLVRGEPNVSXI 184
Query: 310 HVEYDQRPDVFRGTVRYAS 328
Y + P++ G Y S
Sbjct: 185 CSRYYRAPELIFGATDYTS 203
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 80/199 (40%), Gaps = 29/199 (14%)
Query: 141 YRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVY 200
Y + +G G FG VY + ++ E V +F++R E Q+
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLC---DSGELVAIKKVLQDKRFKNR-----------ELQIM 67
Query: 201 NTLGGSHGVPRVHF---KGRQGD--YYVMVMDMLGPSLWDV---WNNNSHTMSIEMVACI 252
L + V +F G + D Y +V+D + +++ V ++ T+ + V
Sbjct: 68 RKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY 127
Query: 253 AIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKW---RDSTTGM 309
+ L +HS G H D+KP+N LL PD L L D G A + + + +
Sbjct: 128 MYQLFRSLAYIHSFGICHRDIKPQNLLLD----PDTAVLKLCDFGSAKQLVRGEPNVSXI 183
Query: 310 HVEYDQRPDVFRGTVRYAS 328
Y + P++ G Y S
Sbjct: 184 CSRYYRAPELIFGATDYTS 202
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 79/199 (39%), Gaps = 29/199 (14%)
Query: 141 YRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVY 200
Y + +G G FG VY + ++ E V F++R E Q+
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLC---DSGELVAIKKVLQGKAFKNR-----------ELQIM 67
Query: 201 NTLGGSHGVPRVHF---KGRQGD--YYVMVMDMLGPSLWDV---WNNNSHTMSIEMVACI 252
L + V +F G + D Y +V+D + +++ V ++ T+ + V
Sbjct: 68 RKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLY 127
Query: 253 AIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKW---RDSTTGM 309
+ L +HS G H D+KP+N LL PD L L D G A + + + +
Sbjct: 128 MYQLFRSLAYIHSFGICHRDIKPQNLLLD----PDTAVLKLCDFGSAKQLVRGEPNVSXI 183
Query: 310 HVEYDQRPDVFRGTVRYAS 328
Y + P++ G Y S
Sbjct: 184 CSRYYRAPELIFGATDYTS 202
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 80/199 (40%), Gaps = 29/199 (14%)
Query: 141 YRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVY 200
Y + +G G FG VY + ++ E V +F++R E Q+
Sbjct: 50 YTDTKVIGNGSFGVVYQAKLC---DSGELVAIKKVLQDKRFKNR-----------ELQIM 95
Query: 201 NTLGGSHGVPRVHF---KGRQGD--YYVMVMDMLGPSLWDV---WNNNSHTMSIEMVACI 252
L + V +F G + D Y +V+D + +++ V ++ T+ + V
Sbjct: 96 RKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY 155
Query: 253 AIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKW---RDSTTGM 309
+ L +HS G H D+KP+N LL PD L L D G A + + + +
Sbjct: 156 MYQLFRSLAYIHSFGICHRDIKPQNLLLD----PDTAVLKLCDFGSAKQLVRGEPNVSYI 211
Query: 310 HVEYDQRPDVFRGTVRYAS 328
Y + P++ G Y S
Sbjct: 212 CSRYYRAPELIFGATDYTS 230
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 80/199 (40%), Gaps = 29/199 (14%)
Query: 141 YRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVY 200
Y + +G G FG VY + ++ E V +F++R E Q+
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLC---DSGELVAIKKVLQDKRFKNR-----------ELQIM 101
Query: 201 NTLGGSHGVPRVHF---KGRQGD--YYVMVMDMLGPSLWDV---WNNNSHTMSIEMVACI 252
L + V +F G + D Y +V+D + +++ V ++ T+ + V
Sbjct: 102 RKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY 161
Query: 253 AIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKW---RDSTTGM 309
+ L +HS G H D+KP+N LL PD L L D G A + + + +
Sbjct: 162 MYQLFRSLAYIHSFGICHRDIKPQNLLLD----PDTAVLKLCDFGSAKQLVRGEPNVSYI 217
Query: 310 HVEYDQRPDVFRGTVRYAS 328
Y + P++ G Y S
Sbjct: 218 CSRYYRAPELIFGATDYTS 236
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 80/199 (40%), Gaps = 29/199 (14%)
Query: 141 YRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVY 200
Y + +G G FG VY + ++ E V +F++R E Q+
Sbjct: 58 YTDTKVIGNGSFGVVYQAKLC---DSGELVAIKKVLQDKRFKNR-----------ELQIM 103
Query: 201 NTLGGSHGVPRVHF---KGRQGD--YYVMVMDMLGPSLWDV---WNNNSHTMSIEMVACI 252
L + V +F G + D Y +V+D + +++ V ++ T+ + V
Sbjct: 104 RKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY 163
Query: 253 AIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKW---RDSTTGM 309
+ L +HS G H D+KP+N LL PD L L D G A + + + +
Sbjct: 164 MYQLFRSLAYIHSFGICHRDIKPQNLLLD----PDTAVLKLCDFGSAKQLVRGEPNVSYI 219
Query: 310 HVEYDQRPDVFRGTVRYAS 328
Y + P++ G Y S
Sbjct: 220 CSRYYRAPELIFGATDYTS 238
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 80/199 (40%), Gaps = 29/199 (14%)
Query: 141 YRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVY 200
Y + +G G FG VY + ++ E V +F++R E Q+
Sbjct: 27 YTDTKVIGNGSFGVVYQAKLC---DSGELVAIKKVLQDKRFKNR-----------ELQIM 72
Query: 201 NTLGGSHGVPRVHF---KGRQGD--YYVMVMDMLGPSLWDV---WNNNSHTMSIEMVACI 252
L + V +F G + D Y +V+D + +++ V ++ T+ + V
Sbjct: 73 RKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY 132
Query: 253 AIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKW---RDSTTGM 309
+ L +HS G H D+KP+N LL PD L L D G A + + + +
Sbjct: 133 MYQLFRSLAYIHSFGICHRDIKPQNLLLD----PDTAVLKLCDFGSAKQLVRGEPNVSYI 188
Query: 310 HVEYDQRPDVFRGTVRYAS 328
Y + P++ G Y S
Sbjct: 189 CSRYYRAPELIFGATDYTS 207
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 80/199 (40%), Gaps = 29/199 (14%)
Query: 141 YRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVY 200
Y + +G G FG VY + ++ E V +F++R E Q+
Sbjct: 60 YTDTKVIGNGSFGVVYQAKLC---DSGELVAIKKVLQDKRFKNR-----------ELQIM 105
Query: 201 NTLGGSHGVPRVHF---KGRQGD--YYVMVMDMLGPSLWDV---WNNNSHTMSIEMVACI 252
L + V +F G + D Y +V+D + +++ V ++ T+ + V
Sbjct: 106 RKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY 165
Query: 253 AIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKW---RDSTTGM 309
+ L +HS G H D+KP+N LL PD L L D G A + + + +
Sbjct: 166 MYQLFRSLAYIHSFGICHRDIKPQNLLLD----PDTAVLKLCDFGSAKQLVRGEPNVSYI 221
Query: 310 HVEYDQRPDVFRGTVRYAS 328
Y + P++ G Y S
Sbjct: 222 CSRYYRAPELIFGATDYTS 240
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 80/199 (40%), Gaps = 29/199 (14%)
Query: 141 YRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVY 200
Y + +G G FG VY + ++ E V +F++R E Q+
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLC---DSGELVAIKKVLQDKRFKNR-----------ELQIM 67
Query: 201 NTLGGSHGVPRVHF---KGRQGD--YYVMVMDMLGPSLWDV---WNNNSHTMSIEMVACI 252
L + V +F G + D Y +V+D + +++ V ++ T+ + V
Sbjct: 68 RKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY 127
Query: 253 AIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKW---RDSTTGM 309
+ L +HS G H D+KP+N LL PD L L D G A + + + +
Sbjct: 128 MYQLFRSLAYIHSFGICHRDIKPQNLLLD----PDTAVLKLCDFGSAKQLVRGEPNVSYI 183
Query: 310 HVEYDQRPDVFRGTVRYAS 328
Y + P++ G Y S
Sbjct: 184 CSRYYRAPELIFGATDYTS 202
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 72/155 (46%), Gaps = 23/155 (14%)
Query: 217 RQGDYYVMVMDMLGPSLWDVWN---NNSHTMSIEMVACIAIEAISILEKMHSK-GYVHGD 272
R+GD ++ M+++ SL + + T+ +++ IA+ + LE +HSK +H D
Sbjct: 77 REGDVWI-CMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRD 135
Query: 273 VKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYAS---V 329
VKP N L+ G ++ + D G++ D D D+ G Y + +
Sbjct: 136 VKPSNVLINALG-----QVKMCDFGISGYLVD---------DVAKDIDAGCKPYMAPERI 181
Query: 330 HAHLGRTG-SRRDDLESLAYTLIFLLRGRLPWQGY 363
+ L + G S + D+ SL T+I L R P+ +
Sbjct: 182 NPELNQKGYSVKSDIWSLGITMIELAILRFPYDSW 216
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 80/199 (40%), Gaps = 29/199 (14%)
Query: 141 YRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVY 200
Y + +G G FG VY + ++ E V +F++R E Q+
Sbjct: 35 YTDTKVIGNGSFGVVYQAKLC---DSGELVAIKKVLQDKRFKNR-----------ELQIM 80
Query: 201 NTLGGSHGVPRVHF---KGRQGD--YYVMVMDMLGPSLWDV---WNNNSHTMSIEMVACI 252
L + V +F G + D Y +V+D + +++ V ++ T+ + V
Sbjct: 81 RKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY 140
Query: 253 AIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKW---RDSTTGM 309
+ L +HS G H D+KP+N LL PD L L D G A + + + +
Sbjct: 141 MYQLFRSLAYIHSFGICHRDIKPQNLLLD----PDTAVLKLCDFGSAKQLVRGEPNVSYI 196
Query: 310 HVEYDQRPDVFRGTVRYAS 328
Y + P++ G Y S
Sbjct: 197 CSRYYRAPELIFGATDYTS 215
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 80/199 (40%), Gaps = 29/199 (14%)
Query: 141 YRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVY 200
Y + +G G FG VY + ++ E V +F++R E Q+
Sbjct: 101 YTDTKVIGNGSFGVVYQAKLC---DSGELVAIKKVLQDKRFKNR-----------ELQIM 146
Query: 201 NTLGGSHGVPRVHF---KGRQGD--YYVMVMDMLGPSLWDV---WNNNSHTMSIEMVACI 252
L + V +F G + D Y +V+D + +++ V ++ T+ + V
Sbjct: 147 RKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY 206
Query: 253 AIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKW---RDSTTGM 309
+ L +HS G H D+KP+N LL PD L L D G A + + + +
Sbjct: 207 MYQLFRSLAYIHSFGICHRDIKPQNLLLD----PDTAVLKLCDFGSAKQLVRGEPNVSYI 262
Query: 310 HVEYDQRPDVFRGTVRYAS 328
Y + P++ G Y S
Sbjct: 263 CSRYYRAPELIFGATDYTS 281
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 84/229 (36%), Gaps = 43/229 (18%)
Query: 145 RKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSK-GCNYGPPYEWQVYNTL 203
R LGKG FG VY+ R ER + + + F+ + K G + E ++ + L
Sbjct: 18 RPLGKGKFGNVYLAR--------ERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHL 69
Query: 204 ---------GGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAI 254
G H RV+ + ++ S +D + A
Sbjct: 70 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDE----------QRTATYIT 119
Query: 255 EAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYD 314
E + L HSK +H D+KPEN LLG G +L + D G + S
Sbjct: 120 ELANALSYCHSKRVIHRDIKPENLLLGSNG-----ELKIADFGWSVHAPSS--------- 165
Query: 315 QRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGY 363
R D GT+ Y GR + DL SL L G P++ +
Sbjct: 166 -RRDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAH 213
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 86/231 (37%), Gaps = 32/231 (13%)
Query: 141 YRLERKLGKGGFGQVYVGR--------RVSPVNANERTGPGAVEVALKFEHRSSKGCNYG 192
Y L LG GG +V++ R V + A+ P L+F +
Sbjct: 14 YELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPS---FYLRFRREAQNAAALN 70
Query: 193 PPYEWQVYNTLGGSHGVPRVHFKGRQGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVAC 251
P VY T G P G +VM+ + G +L D+ + +
Sbjct: 71 HPAIVAVYAT--GEAETP-------AGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEV 121
Query: 252 IAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHV 311
IA +A L H G +H DVKP N ++ + ++D G+A DS +
Sbjct: 122 IA-DACQALNFSHQNGIIHRDVKPANIMISA-----TNAVKVMDFGIARAIADSGNSV-- 173
Query: 312 EYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQG 362
Q V GT +Y S G + R D+ SL L +L G P+ G
Sbjct: 174 --TQTAAVI-GTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTG 221
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 88/232 (37%), Gaps = 43/232 (18%)
Query: 141 YRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSK-GCNYGPPYEWQV 199
+ + R LGKG FG VY+ R E+ + + + F+ + K G + E ++
Sbjct: 27 FEIGRPLGKGKFGNVYLAR--------EKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 78
Query: 200 YNTL---------GGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVA 250
+ L G H RV+ + ++ S +D + A
Sbjct: 79 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE----------QRTA 128
Query: 251 CIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMH 310
E + L HSK +H D+KPEN LLG G +L + D G W +H
Sbjct: 129 TYITELANALSYCHSKRVIHRDIKPENLLLGSAG-----ELKIADFG----W-----SVH 174
Query: 311 VEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQG 362
+R + GT+ Y GR + DL SL L G+ P++
Sbjct: 175 APSSRRTTLC-GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 225
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 91/225 (40%), Gaps = 29/225 (12%)
Query: 141 YRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSK-GCNYGPPYEWQV 199
+ + R LGKG FG VY+ R E+ + + + F+ + K G + E ++
Sbjct: 10 FEIGRPLGKGKFGNVYLAR--------EKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 61
Query: 200 YNTLGGSHGVPRVH--FKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAI 257
+ L + R++ F Y ++ LG ++ + + A E
Sbjct: 62 QSHLRHP-NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELA 118
Query: 258 SILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYDQRP 317
+ L HSK +H D+KPEN LLG G +L + D G W +H +R
Sbjct: 119 NALSYCHSKRVIHRDIKPENLLLGSAG-----ELKIADFG----W-----SVHAPSSRRT 164
Query: 318 DVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQG 362
++ GT+ Y GR + DL SL L G+ P++
Sbjct: 165 ELC-GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 208
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 49/109 (44%), Gaps = 7/109 (6%)
Query: 255 EAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYD 314
+A+ LE +HS+ +HGDVK +N LL + D L D G A + G +
Sbjct: 174 QALEGLEYLHSRRILHGDVKADNVLL----SSDGSHAALCDFGHAVCLQPDGLGKDLLTG 229
Query: 315 QRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGY 363
D GT + + LGR+ + D+ S ++ +L G PW +
Sbjct: 230 ---DYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPWTQF 275
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 53/122 (43%), Gaps = 8/122 (6%)
Query: 218 QGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPEN 277
+G + ++ GPSL ++ V + + L +HS+G VH DVKP N
Sbjct: 128 EGGILYLQTELCGPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPAN 187
Query: 278 FLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYDQR---PDVFRGTVRYASVHAHLG 334
LGP G + L D GL + + G E D R P++ +G+ A+ LG
Sbjct: 188 IFLGPRG-----RCKLGDFGLLVELGTAGAGEVQEGDPRYMAPELLQGSYGTAADVFSLG 242
Query: 335 RT 336
T
Sbjct: 243 LT 244
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 49/109 (44%), Gaps = 7/109 (6%)
Query: 255 EAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYD 314
+A+ LE +HS+ +HGDVK +N LL + D L D G A + G +
Sbjct: 193 QALEGLEYLHSRRILHGDVKADNVLL----SSDGSHAALCDFGHAVCLQPDGLGKSLLTG 248
Query: 315 QRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGY 363
D GT + + LGR+ + D+ S ++ +L G PW +
Sbjct: 249 ---DYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPWTQF 294
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 88/232 (37%), Gaps = 43/232 (18%)
Query: 141 YRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSK-GCNYGPPYEWQV 199
+ + R LGKG FG VY+ R E+ + + + F+ + K G + E ++
Sbjct: 36 FEIGRPLGKGKFGNVYLAR--------EKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 87
Query: 200 YNTL---------GGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVA 250
+ L G H RV Y ++ LG ++ + A
Sbjct: 88 QSHLRHPNILRLYGYFHDATRV--------YLILEYAPLGTVYREL--QKLSKFDEQRTA 137
Query: 251 CIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMH 310
E + L HSK +H D+KPEN LLG G +L + D G W +H
Sbjct: 138 TYITELANALSYCHSKRVIHRDIKPENLLLGSAG-----ELKIADFG----W-----SVH 183
Query: 311 VEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQG 362
+R + GT+ Y GR + DL SL L G+ P++
Sbjct: 184 APSSRRTTLC-GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 234
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 79/199 (39%), Gaps = 29/199 (14%)
Query: 141 YRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVY 200
Y + +G G FG VY + ++ E V F++R E Q+
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLC---DSGELVAIKKVLQGKAFKNR-----------ELQIM 67
Query: 201 NTLGGSHGVPRVHF---KGRQGD--YYVMVMDMLGPSLWDV---WNNNSHTMSIEMVACI 252
L + V +F G + D Y +V+D + +++ V ++ T+ + V
Sbjct: 68 RKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY 127
Query: 253 AIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKW---RDSTTGM 309
+ L +HS G H D+KP+N LL PD L L D G A + + + +
Sbjct: 128 MYQLFRSLAYIHSFGICHRDIKPQNLLLD----PDTAVLKLCDFGSAKQLVRGEPNVSYI 183
Query: 310 HVEYDQRPDVFRGTVRYAS 328
Y + P++ G Y S
Sbjct: 184 CSRYYRAPELIFGATDYTS 202
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 79/199 (39%), Gaps = 29/199 (14%)
Query: 141 YRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVY 200
Y + +G G FG VY + ++ E V F++R E Q+
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLC---DSGELVAIKKVLQGKAFKNR-----------ELQIM 67
Query: 201 NTLGGSHGVPRVHF---KGRQGD--YYVMVMDMLGPSLWDV---WNNNSHTMSIEMVACI 252
L + V +F G + D Y +V+D + +++ V ++ T+ + V
Sbjct: 68 RKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY 127
Query: 253 AIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKW---RDSTTGM 309
+ L +HS G H D+KP+N LL PD L L D G A + + + +
Sbjct: 128 MYQLFRSLAYIHSFGICHRDIKPQNLLLD----PDTAVLKLCDFGSAKQLVRGEPNVSYI 183
Query: 310 HVEYDQRPDVFRGTVRYAS 328
Y + P++ G Y S
Sbjct: 184 CSRYYRAPELIFGATDYTS 202
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 86/232 (37%), Gaps = 43/232 (18%)
Query: 141 YRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSK-GCNYGPPYEWQV 199
+ + R LGKG FG VY+ R E+ + + + F+ + K G + E ++
Sbjct: 11 FEIGRPLGKGKFGNVYLAR--------EKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 62
Query: 200 YNTL---------GGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVA 250
+ L G H RV Y ++ LG ++ + + A
Sbjct: 63 QSHLRHPNILRLYGYFHDATRV--------YLILEYAPLGTVYRELQKLSK--FDEQRTA 112
Query: 251 CIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMH 310
E + L HSK +H D+KPEN LLG G +L + D G + S
Sbjct: 113 TYITELANALSYCHSKRVIHRDIKPENLLLGSAG-----ELKIADFGWSCHAPSS----- 162
Query: 311 VEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQG 362
R GT+ Y GR + DL SL L G+ P++
Sbjct: 163 -----RRTTLSGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 209
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 89/232 (38%), Gaps = 43/232 (18%)
Query: 141 YRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSK-GCNYGPPYEWQV 199
+ + R LGKG FG VY+ R E+ + + + F+ + K G + E ++
Sbjct: 13 FEIGRPLGKGKFGNVYLAR--------EKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 64
Query: 200 YNTL---------GGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVA 250
+ L G H RV Y ++ LG ++ + + A
Sbjct: 65 QSHLRHPNILRLYGYFHDATRV--------YLILEYAPLGTVYRELQKLSK--FDEQRTA 114
Query: 251 CIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMH 310
E + L HSK +H D+KPEN LLG G +L + D G W +H
Sbjct: 115 TYITELANALSYCHSKRVIHRDIKPENLLLGSAG-----ELKIADFG----W-----SVH 160
Query: 311 VEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQG 362
+R + GT+ Y GR + DL SL L G+ P++
Sbjct: 161 APSSRRTTLC-GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 211
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 89/232 (38%), Gaps = 43/232 (18%)
Query: 141 YRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSK-GCNYGPPYEWQV 199
+ + R LGKG FG VY+ R E+ + + + F+ + K G + E ++
Sbjct: 15 FEIGRPLGKGKFGNVYLAR--------EKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 66
Query: 200 YNTL---------GGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVA 250
+ L G H RV Y ++ LG ++ + + A
Sbjct: 67 QSHLRHPNILRLYGYFHDATRV--------YLILEYAPLGTVYRELQKLSK--FDEQRTA 116
Query: 251 CIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMH 310
E + L HSK +H D+KPEN LLG G +L + D G W +H
Sbjct: 117 TYITELANALSYCHSKRVIHRDIKPENLLLGSAG-----ELKIADFG----W-----SVH 162
Query: 311 VEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQG 362
+R + GT+ Y GR + DL SL L G+ P++
Sbjct: 163 APSSRRTTLC-GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 213
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 73/152 (48%), Gaps = 17/152 (11%)
Query: 217 RQGDYYVMVMDMLGPSLWDVWN---NNSHTMSIEMVACIAIEAISILEKMHSK-GYVHGD 272
R+GD ++ M+++ SL + + T+ +++ IA+ + LE +HSK +H D
Sbjct: 121 REGDVWI-CMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRD 179
Query: 273 VKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAH 332
VKP N L+ G ++ + D G++ DS ++ +P + R ++
Sbjct: 180 VKPSNVLINALG-----QVKMCDFGISGYLVDSVAKT-IDAGCKP--YMAPER---INPE 228
Query: 333 LGRTG-SRRDDLESLAYTLIFLLRGRLPWQGY 363
L + G S + D+ SL T+I L R P+ +
Sbjct: 229 LNQKGYSVKSDIWSLGITMIELAILRFPYDSW 260
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 89/232 (38%), Gaps = 43/232 (18%)
Query: 141 YRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSK-GCNYGPPYEWQV 199
+ + R LGKG FG VY+ R E+ + + + F+ + K G + E ++
Sbjct: 15 FEIGRPLGKGKFGNVYLAR--------EKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 66
Query: 200 YNTL---------GGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVA 250
+ L G H RV Y ++ LG ++ + + A
Sbjct: 67 QSHLRHPNILRLYGYFHDATRV--------YLILEYAPLGTVYRELQKLSK--FDEQRTA 116
Query: 251 CIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMH 310
E + L HSK +H D+KPEN LLG G +L + D G W +H
Sbjct: 117 TYITELANALSYCHSKRVIHRDIKPENLLLGSAG-----ELKIADFG----W-----SVH 162
Query: 311 VEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQG 362
+R + GT+ Y GR + DL SL L G+ P++
Sbjct: 163 APSSRRTTLC-GTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFEA 213
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 87/225 (38%), Gaps = 20/225 (8%)
Query: 138 SPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEW 197
S Y+ +R LGKG FG+V + + ++ TG + K E
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCK-------DKITGQECAVKVISKRQVKQKTDKESLLREV 77
Query: 198 QVYNTLGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAI 257
Q+ L + F +G +Y++ G L+D + ++ A I + +
Sbjct: 78 QLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVD-AARIIRQVL 136
Query: 258 SILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYDQRP 317
S + H VH D+KPEN LL + + ++D GL+T H E ++
Sbjct: 137 SGITYXHKNKIVHRDLKPENLLL--ESKSKDANIRIIDFGLST---------HFEASKKX 185
Query: 318 DVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQG 362
GT Y + G T + D+ S L LL G P+ G
Sbjct: 186 KDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNG 229
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 68/162 (41%), Gaps = 21/162 (12%)
Query: 249 VACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTG 308
+A I E + L+ +HS+ +H D+K N LL G ++ L D G+A + D+
Sbjct: 121 IATILREILKGLDYLHSEKKIHRDIKAANVLLSEHG-----EVKLADFGVAGQLTDTQI- 174
Query: 309 MHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENK 368
+ + F GT + + + D+ SL T I L RG P
Sbjct: 175 -------KRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKV 227
Query: 369 GFLVCKKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNY 410
FL+ K +P L P ++FVE +N +EP++
Sbjct: 228 LFLIPK----NNPPTLEGNYSKPLKEFVEACLN----KEPSF 261
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 68/162 (41%), Gaps = 21/162 (12%)
Query: 249 VACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTG 308
+A I E + L+ +HS+ +H D+K N LL G ++ L D G+A + D+
Sbjct: 106 IATILREILKGLDYLHSEKKIHRDIKAANVLLSEHG-----EVKLADFGVAGQLTDTQI- 159
Query: 309 MHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENK 368
+ + F GT + + + D+ SL T I L RG P
Sbjct: 160 -------KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKV 212
Query: 369 GFLVCKKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNY 410
FL+ K +P L P ++FVE +N +EP++
Sbjct: 213 LFLIPK----NNPPTLEGNYSKPLKEFVEACLN----KEPSF 246
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 90/224 (40%), Gaps = 27/224 (12%)
Query: 141 YRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVY 200
+ + R LGKG FG VY+ R +R A++V K + + G + E ++
Sbjct: 7 FEIGRPLGKGKFGNVYLARE------KQRKFILALKVLFKAQLEKA-GVEHQLRREVEIQ 59
Query: 201 NTLGGSHGVPRVH--FKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAIS 258
+ L + R++ F Y ++ LG ++ + + A E +
Sbjct: 60 SHLRHP-NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELAN 116
Query: 259 ILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYDQRPD 318
L HSK +H D+KPEN LLG G +L + D G W +H +R
Sbjct: 117 ALSYCHSKRVIHRDIKPENLLLGSAG-----ELKIADFG----W-----SVHAPSSRRTT 162
Query: 319 VFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQG 362
+ GT+ Y GR + DL SL L G+ P++
Sbjct: 163 LC-GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 205
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 88/232 (37%), Gaps = 43/232 (18%)
Query: 141 YRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSK-GCNYGPPYEWQV 199
+ + R LGKG FG VY+ R E+ + + + F+ + K G + E ++
Sbjct: 12 FEIGRPLGKGKFGNVYLAR--------EKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 63
Query: 200 YNTL---------GGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVA 250
+ L G H RV Y ++ LG ++ + A
Sbjct: 64 QSHLRHPNILRLYGYFHDATRV--------YLILEYAPLGTVYREL--QKLSKFDEQRTA 113
Query: 251 CIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMH 310
E + L HSK +H D+KPEN LLG G +L + D G W +H
Sbjct: 114 TYITELANALSYCHSKRVIHRDIKPENLLLGSAG-----ELKIADFG----W-----SVH 159
Query: 311 VEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQG 362
+R + GT+ Y GR + DL SL L G+ P++
Sbjct: 160 APSSRRXXLC-GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 210
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 89/225 (39%), Gaps = 29/225 (12%)
Query: 141 YRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSK-GCNYGPPYEWQV 199
+ + R LGKG FG VY+ R E+ + + + F+ + K G + E ++
Sbjct: 10 FEIGRPLGKGKFGNVYLAR--------EKNSKFILALKVLFKAQLEKAGVEHQLRREVEI 61
Query: 200 YNTLGGSHGVPRVH--FKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAI 257
+ L + R++ F Y ++ LG ++ + A E
Sbjct: 62 QSHLRHP-NILRLYGYFHDSTRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELA 118
Query: 258 SILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYDQRP 317
+ L HSK +H D+KPEN LLG G +L + D G W +H +R
Sbjct: 119 NALSYCHSKKVIHRDIKPENLLLGSAG-----ELKIADFG----W-----SVHAPSSRRA 164
Query: 318 DVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQG 362
+ GT+ Y GR + DL SL L G+ P++
Sbjct: 165 ALC-GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 208
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 90/225 (40%), Gaps = 29/225 (12%)
Query: 141 YRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSK-GCNYGPPYEWQV 199
+ + R LGKG FG VY+ R E+ + + + F+ + K G + E ++
Sbjct: 10 FEIGRPLGKGKFGNVYLAR--------EKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 61
Query: 200 YNTLGGSHGVPRVH--FKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAI 257
+ L + R++ F Y ++ LG ++ + + A E
Sbjct: 62 QSHLRHP-NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELA 118
Query: 258 SILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYDQRP 317
+ L HSK +H D+KPEN LLG G +L + D G W +H +R
Sbjct: 119 NALSYCHSKRVIHRDIKPENLLLGSAG-----ELKIADFG----W-----SVHAPSSRRT 164
Query: 318 DVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQG 362
+ GT+ Y GR + DL SL L G+ P++
Sbjct: 165 TLC-GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 208
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 68/162 (41%), Gaps = 21/162 (12%)
Query: 249 VACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTG 308
+A I E + L+ +HS+ +H D+K N LL G ++ L D G+A + D+
Sbjct: 106 IATILREILKGLDYLHSEKKIHRDIKAANVLLSEHG-----EVKLADFGVAGQLTDTQI- 159
Query: 309 MHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENK 368
+ + F GT + + + D+ SL T I L RG P
Sbjct: 160 -------KRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKV 212
Query: 369 GFLVCKKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNY 410
FL+ K +P L P ++FVE +N +EP++
Sbjct: 213 LFLIPK----NNPPTLEGNYSKPLKEFVEACLN----KEPSF 246
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 98/229 (42%), Gaps = 35/229 (15%)
Query: 141 YRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFE--HRSSKGCNYGPPYEWQ 198
Y + + +G+G FG+V + R A+++ A+++ KFE RS + W+
Sbjct: 77 YDVVKVIGRGAFGEVQLVRH----KASQKVY--AMKLLSKFEMIKRSDSA------FFWE 124
Query: 199 VYNTLGGSHGVPRVH-FKGRQGDYYV-MVMD-MLGPSLWDVWNNNSHTMSIEMVACIAIE 255
+ + ++ V F Q D Y+ MVM+ M G L ++ +N + + + E
Sbjct: 125 ERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSN--YDVPEKWAKFYTAE 182
Query: 256 AISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYDQ 315
+ L+ +HS G +H DVKP+N LL G L L D G K D T +H
Sbjct: 183 VVLALDAIHSMGLIHRDVKPDNMLLDKHG-----HLKLADFGTCMK-MDETGMVHC---- 232
Query: 316 RPDVFRGTVRYASVHAHLGRTGS----RRDDLESLAYTLIFLLRGRLPW 360
D GT Y S + G R D S+ L +L G P+
Sbjct: 233 --DTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPF 279
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 68/162 (41%), Gaps = 21/162 (12%)
Query: 249 VACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTG 308
+A I E + L+ +HS+ +H D+K N LL G ++ L D G+A + D+
Sbjct: 126 IATILREILKGLDYLHSEKKIHRDIKAANVLLSEHG-----EVKLADFGVAGQLTDTQI- 179
Query: 309 MHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENK 368
+ + F GT + + + D+ SL T I L RG P
Sbjct: 180 -------KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKV 232
Query: 369 GFLVCKKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNY 410
FL+ K +P L P ++FVE +N +EP++
Sbjct: 233 LFLIPK----NNPPTLEGNYSKPLKEFVEACLN----KEPSF 266
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 48/110 (43%), Gaps = 23/110 (20%)
Query: 263 MHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYDQRPDVFRG 322
+H G VH D+KP NFL+ + L L+D G+A + + TT + D G
Sbjct: 127 IHQHGIVHSDLKPANFLIV------DGMLKLIDFGIANQMQPDTTSV------VKDSQVG 174
Query: 323 TVRYASVHAHLGRTGSRRD-----------DLESLAYTLIFLLRGRLPWQ 361
TV Y A + SR + D+ SL L ++ G+ P+Q
Sbjct: 175 TVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ 224
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 88/232 (37%), Gaps = 43/232 (18%)
Query: 141 YRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSK-GCNYGPPYEWQV 199
+ + R LGKG FG VY+ R E+ + + + F+ + K G + E ++
Sbjct: 13 FEIGRPLGKGKFGNVYLAR--------EKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 64
Query: 200 YNTL---------GGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVA 250
+ L G H RV Y ++ LG ++ + A
Sbjct: 65 QSHLRHPNILRLYGYFHDATRV--------YLILEYAPLGTVYREL--QKLSKFDEQRTA 114
Query: 251 CIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMH 310
E + L HSK +H D+KPEN LLG G +L + D G W +H
Sbjct: 115 TYITELANALSYCHSKRVIHRDIKPENLLLGSAG-----ELKIADFG----W-----SVH 160
Query: 311 VEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQG 362
+R + GT+ Y GR + DL SL L G+ P++
Sbjct: 161 APSSRRAALC-GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 211
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 63/158 (39%), Gaps = 15/158 (9%)
Query: 147 LGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSS--KGCNYGPPYEWQVYNTLG 204
LG+G F VY R ++ T +K HRS G N E ++ L
Sbjct: 18 LGEGQFATVYKAR-------DKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELS 70
Query: 205 GSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMH 264
+ + + G + + +V D + L + +NS ++ + + + LE +H
Sbjct: 71 HPNIIGLLDAFGHKSNIS-LVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLH 129
Query: 265 SKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKW 302
+H D+KP N LL G L L D GLA +
Sbjct: 130 QHWILHRDLKPNNLLLDENGV-----LKLADFGLAKSF 162
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 90/225 (40%), Gaps = 29/225 (12%)
Query: 141 YRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSK-GCNYGPPYEWQV 199
+ + R LGKG FG VY+ R E+ + + + F+ + K G + E ++
Sbjct: 9 FEIGRPLGKGKFGNVYLAR--------EKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 60
Query: 200 YNTLGGSHGVPRVH--FKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAI 257
+ L + R++ F Y ++ LG ++ + + A E
Sbjct: 61 QSHLRHP-NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELA 117
Query: 258 SILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYDQRP 317
+ L HSK +H D+KPEN LLG G +L + D G W +H +R
Sbjct: 118 NALSYCHSKRVIHRDIKPENLLLGSAG-----ELKIADFG----W-----SVHAPSSRRT 163
Query: 318 DVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQG 362
+ GT+ Y GR + DL SL L G+ P++
Sbjct: 164 TLC-GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 207
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 48/110 (43%), Gaps = 23/110 (20%)
Query: 263 MHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYDQRPDVFRG 322
+H G VH D+KP NFL+ + L L+D G+A + + TT + D G
Sbjct: 171 IHQHGIVHSDLKPANFLIV------DGMLKLIDFGIANQMQPDTTSV------VKDSQVG 218
Query: 323 TVRYASVHAHLGRTGSRRD-----------DLESLAYTLIFLLRGRLPWQ 361
TV Y A + SR + D+ SL L ++ G+ P+Q
Sbjct: 219 TVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ 268
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 48/110 (43%), Gaps = 23/110 (20%)
Query: 263 MHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYDQRPDVFRG 322
+H G VH D+KP NFL+ + L L+D G+A + + TT + D G
Sbjct: 124 IHQHGIVHSDLKPANFLIV------DGMLKLIDFGIANQMQPDTTSV------VKDSQVG 171
Query: 323 TVRYASVHAHLGRTGSRRD-----------DLESLAYTLIFLLRGRLPWQ 361
TV Y A + SR + D+ SL L ++ G+ P+Q
Sbjct: 172 TVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ 221
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 48/110 (43%), Gaps = 23/110 (20%)
Query: 263 MHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYDQRPDVFRG 322
+H G VH D+KP NFL+ + L L+D G+A + + TT + D G
Sbjct: 123 IHQHGIVHSDLKPANFLIV------DGMLKLIDFGIANQMQPDTTSV------VKDSQVG 170
Query: 323 TVRYASVHAHLGRTGSRRD-----------DLESLAYTLIFLLRGRLPWQ 361
TV Y A + SR + D+ SL L ++ G+ P+Q
Sbjct: 171 TVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ 220
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 48/110 (43%), Gaps = 23/110 (20%)
Query: 263 MHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYDQRPDVFRG 322
+H G VH D+KP NFL+ + L L+D G+A + + TT + D G
Sbjct: 143 IHQHGIVHSDLKPANFLIV------DGMLKLIDFGIANQMQPDTTSV------VKDSQVG 190
Query: 323 TVRYASVHAHLGRTGSRRD-----------DLESLAYTLIFLLRGRLPWQ 361
TV Y A + SR + D+ SL L ++ G+ P+Q
Sbjct: 191 TVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ 240
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 89/232 (38%), Gaps = 43/232 (18%)
Query: 141 YRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSK-GCNYGPPYEWQV 199
+ + R LGKG FG VY+ R E+ + + + F+ + K G + E ++
Sbjct: 13 FEIGRPLGKGKFGNVYLAR--------EKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 64
Query: 200 YNTL---------GGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVA 250
+ L G H RV Y ++ LG ++ + + A
Sbjct: 65 QSHLRHPNILRLYGYFHDATRV--------YLILEYAPLGTVYRELQKLSK--FDEQRTA 114
Query: 251 CIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMH 310
E + L HSK +H D+KPEN LLG G +L + D G W +H
Sbjct: 115 TYITELANALSYCHSKRVIHRDIKPENLLLGSAG-----ELKIADFG----W-----SVH 160
Query: 311 VEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQG 362
+R + GT+ Y GR + DL SL L G+ P++
Sbjct: 161 APSSRRTTLC-GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 211
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 90/225 (40%), Gaps = 29/225 (12%)
Query: 141 YRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSK-GCNYGPPYEWQV 199
+ + R LGKG FG VY+ R E+ + + + F+ + K G + E ++
Sbjct: 10 FEIGRPLGKGKFGNVYLAR--------EKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 61
Query: 200 YNTLGGSHGVPRVH--FKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAI 257
+ L + R++ F Y ++ LG ++ + + A E
Sbjct: 62 QSHLRHP-NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELA 118
Query: 258 SILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYDQRP 317
+ L HSK +H D+KPEN LLG G +L + D G W +H +R
Sbjct: 119 NALSYCHSKRVIHRDIKPENLLLGSAG-----ELKIADFG----W-----SVHAPSSRRA 164
Query: 318 DVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQG 362
+ GT+ Y GR + DL SL L G+ P++
Sbjct: 165 ALC-GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 208
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 89/232 (38%), Gaps = 43/232 (18%)
Query: 141 YRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSK-GCNYGPPYEWQV 199
+ + R LGKG FG VY+ R E+ + + + F+ + K G + E ++
Sbjct: 14 FEIGRPLGKGKFGNVYLAR--------EKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 65
Query: 200 YNTL---------GGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVA 250
+ L G H RV Y ++ LG ++ + + A
Sbjct: 66 QSHLRHPNILRLYGYFHDATRV--------YLILEYAPLGTVYRELQKLSK--FDEQRTA 115
Query: 251 CIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMH 310
E + L HSK +H D+KPEN LLG G +L + D G W +H
Sbjct: 116 TYITELANALSYCHSKRVIHRDIKPENLLLGSAG-----ELKIADFG----W-----SVH 161
Query: 311 VEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQG 362
+R + GT+ Y GR + DL SL L G+ P++
Sbjct: 162 APSSRRTTLC-GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 212
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 90/225 (40%), Gaps = 29/225 (12%)
Query: 141 YRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSK-GCNYGPPYEWQV 199
+ + R LGKG FG VY+ R E+ + + + F+ + K G + E ++
Sbjct: 10 FEIGRPLGKGKFGNVYLAR--------EKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 61
Query: 200 YNTLGGSHGVPRVH--FKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAI 257
+ L + R++ F Y ++ LG ++ + + A E
Sbjct: 62 QSHLRHP-NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELA 118
Query: 258 SILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYDQRP 317
+ L HSK +H D+KPEN LLG G +L + D G W +H +R
Sbjct: 119 NALSYCHSKRVIHRDIKPENLLLGSAG-----ELKIADFG----W-----SVHAPSSRRT 164
Query: 318 DVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQG 362
+ GT+ Y GR + DL SL L G+ P++
Sbjct: 165 XLC-GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 208
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 48/110 (43%), Gaps = 23/110 (20%)
Query: 263 MHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYDQRPDVFRG 322
+H G VH D+KP NFL+ + L L+D G+A + + TT + D G
Sbjct: 171 IHQHGIVHSDLKPANFLIV------DGMLKLIDFGIANQMQPDTTSV------VKDSQVG 218
Query: 323 TVRYASVHAHLGRTGSRRD-----------DLESLAYTLIFLLRGRLPWQ 361
TV Y A + SR + D+ SL L ++ G+ P+Q
Sbjct: 219 TVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ 268
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 64/153 (41%), Gaps = 17/153 (11%)
Query: 249 VACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTG 308
+A I E + L+ +HS+ +H D+K N LL G D K L D G+A + D+
Sbjct: 118 IATILREILKGLDYLHSERKIHRDIKAANVLLSEQG--DVK---LADFGVAGQLTDTQI- 171
Query: 309 MHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENK 368
+ + F GT + + + D+ SL T I L +G P
Sbjct: 172 -------KRNXFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRV 224
Query: 369 GFLVCKKKMATSPDGLCCFCPAPFRQFVEYVVN 401
FL+ K SP L PF++FVE +N
Sbjct: 225 LFLIPK----NSPPTLEGQHSKPFKEFVEACLN 253
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 91/235 (38%), Gaps = 49/235 (20%)
Query: 141 YRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSK-GCNYGPPYEWQV 199
+ + R LGKG FG VY+ R E+ + + + F+ + K G + E ++
Sbjct: 15 FEIGRPLGKGKFGNVYLAR--------EKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 66
Query: 200 YNTL---------GGSHGVPRVHF---KGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIE 247
+ L G H RV+ +G+ Y + + S +D +
Sbjct: 67 QSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKL---SKFDE----------Q 113
Query: 248 MVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTT 307
A E + L HSK +H D+KPEN LLG G +L + D G W
Sbjct: 114 RTATYITELANALSYCHSKRVIHRDIKPENLLLGSAG-----ELKIADFG----W----- 159
Query: 308 GMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQG 362
+H +R + GT+ Y GR + DL SL L G+ P++
Sbjct: 160 SVHAPSSRRTTLC-GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 213
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 50/112 (44%), Gaps = 23/112 (20%)
Query: 260 LEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYDQRPDV 319
LE +H+KGY H D+KP N LLG G P L+DLG + +HVE ++
Sbjct: 147 LEAIHAKGYAHRDLKPTNILLGDEGQP-----VLMDLGSMNQ-----ACIHVEGSRQALT 196
Query: 320 F------RGTVRYA-----SVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPW 360
R T+ Y SV +H R D+ SL L ++ G P+
Sbjct: 197 LQDWAAQRCTISYRAPELFSVQSHC--VIDERTDVWSLGCVLYAMMFGEGPY 246
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 90/225 (40%), Gaps = 29/225 (12%)
Query: 141 YRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSK-GCNYGPPYEWQV 199
+ + R LGKG FG VY+ R E+ + + + F+ + K G + E ++
Sbjct: 13 FEIGRPLGKGKFGNVYLAR--------EKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 64
Query: 200 YNTLGGSHGVPRVH--FKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAI 257
+ L + R++ F Y ++ LG ++ + + A E
Sbjct: 65 QSHLRHP-NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELA 121
Query: 258 SILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYDQRP 317
+ L HSK +H D+KPEN LLG G +L + D G W +H +R
Sbjct: 122 NALSYCHSKRVIHRDIKPENLLLGSAG-----ELKIADFG----W-----SVHAPSSRRX 167
Query: 318 DVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQG 362
+ GT+ Y GR + DL SL L G+ P++
Sbjct: 168 XLC-GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 211
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 68/164 (41%), Gaps = 19/164 (11%)
Query: 141 YRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVY 200
Y + +LG G FG V+ R V G V VA KF + Y E +
Sbjct: 53 YDILEELGSGAFGVVH--RCVE-------KATGRVFVA-KFINTPYPLDKYTVKNEISIM 102
Query: 201 NTLGGSHGVPRVHFKGRQGDYY--VMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAI 257
N L H ++ D Y V++++ L G L+D + MS V +A
Sbjct: 103 NQL---HHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQAC 159
Query: 258 SILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATK 301
L+ MH VH D+KPEN + T + ++D GLATK
Sbjct: 160 EGLKHMHEHSIVHLDIKPENIMC---ETKKASSVKIIDFGLATK 200
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 89/225 (39%), Gaps = 29/225 (12%)
Query: 141 YRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSK-GCNYGPPYEWQV 199
+ + R LGKG FG VY+ R E+ + + + F+ + K G + E ++
Sbjct: 10 FEIGRPLGKGKFGNVYLAR--------EKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 61
Query: 200 YNTLGGSHGVPRVH--FKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAI 257
+ L + R++ F Y ++ LG ++ + A E
Sbjct: 62 QSHLRHP-NILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELA 118
Query: 258 SILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYDQRP 317
+ L HSK +H D+KPEN LLG G +L + D G W +H +R
Sbjct: 119 NALSYCHSKRVIHRDIKPENLLLGSAG-----ELKIADFG----W-----SVHAPSSRRX 164
Query: 318 DVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQG 362
+ GT+ Y GR + DL SL L G+ P++
Sbjct: 165 XLC-GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 208
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 90/235 (38%), Gaps = 49/235 (20%)
Query: 141 YRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSK-GCNYGPPYEWQV 199
+ + R LGKG FG VY+ R E+ + + + F+ + K G + E ++
Sbjct: 15 FEIGRPLGKGKFGNVYLAR--------EKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 66
Query: 200 YNTL---------GGSHGVPRVHF---KGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIE 247
+ L G H RV+ +G+ Y + + S +D +
Sbjct: 67 QSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKL---SKFDE----------Q 113
Query: 248 MVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTT 307
A E + L HSK +H D+KPEN LLG G +L + D G W
Sbjct: 114 RTATYITELANALSYCHSKRVIHRDIKPENLLLGSAG-----ELKIADFG----W----- 159
Query: 308 GMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQG 362
+H +R GT+ Y GR + DL SL L G+ P++
Sbjct: 160 SVHAPSSRR-XXLXGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 213
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 88/232 (37%), Gaps = 43/232 (18%)
Query: 141 YRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSK-GCNYGPPYEWQV 199
+ + R LGKG FG VY+ R E+ + + + F+ + K G + E ++
Sbjct: 12 FEIGRPLGKGKFGNVYLAR--------EKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 63
Query: 200 YNTL---------GGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVA 250
+ L G H RV+ + ++ S +D + A
Sbjct: 64 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE----------QRTA 113
Query: 251 CIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMH 310
E + L HSK +H D+KPEN LLG G +L + + G W +H
Sbjct: 114 TYITELANALSYCHSKRVIHRDIKPENLLLGSAG-----ELKIANFG----W-----SVH 159
Query: 311 VEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQG 362
+R + GT+ Y GR + DL SL L G+ P++
Sbjct: 160 APSSRRTTLC-GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 210
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 49/109 (44%), Gaps = 7/109 (6%)
Query: 255 EAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYD 314
+A+ LE +H++ +HGDVK +N LL + D + L D G A + G +
Sbjct: 158 QALEGLEYLHTRRILHGDVKADNVLL----SSDGSRAALCDFGHALCLQPDGLGKSLLTG 213
Query: 315 QRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGY 363
D GT + + +G+ + D+ S ++ +L G PW Y
Sbjct: 214 ---DYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQY 259
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 49/109 (44%), Gaps = 7/109 (6%)
Query: 255 EAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYD 314
+A+ LE +H++ +HGDVK +N LL + D + L D G A + G +
Sbjct: 172 QALEGLEYLHTRRILHGDVKADNVLL----SSDGSRAALCDFGHALCLQPDGLGKSLLTG 227
Query: 315 QRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGY 363
D GT + + +G+ + D+ S ++ +L G PW Y
Sbjct: 228 ---DYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQY 273
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 86/229 (37%), Gaps = 43/229 (18%)
Query: 145 RKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSK-GCNYGPPYEWQVYNTL 203
R LGKG FG VY+ R ER + + + F+ + K G + E ++ + L
Sbjct: 18 RPLGKGKFGNVYLAR--------ERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHL 69
Query: 204 ---------GGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAI 254
G H RV+ + ++ S +D + A
Sbjct: 70 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDE----------QRTATYIT 119
Query: 255 EAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYD 314
E + L HSK +H D+KPEN LLG G +L + D G W +H
Sbjct: 120 ELANALSYCHSKRVIHRDIKPENLLLGSNG-----ELKIADFG----W-----SVHAPSS 165
Query: 315 QRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGY 363
+R + GT+ Y GR + DL SL L G P++ +
Sbjct: 166 RRTTLC-GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAH 213
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 49/109 (44%), Gaps = 7/109 (6%)
Query: 255 EAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYD 314
+A+ LE +H++ +HGDVK +N LL + D + L D G A + G +
Sbjct: 174 QALEGLEYLHTRRILHGDVKADNVLL----SSDGSRAALCDFGHALCLQPDGLGKSLLTG 229
Query: 315 QRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGY 363
D GT + + +G+ + D+ S ++ +L G PW Y
Sbjct: 230 ---DYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQY 275
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 58/265 (21%), Positives = 115/265 (43%), Gaps = 45/265 (16%)
Query: 141 YRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGP------- 193
Y++ LG GGFG VY G RVS + VA+K + + ++G
Sbjct: 10 YQVGPLLGSGGFGSVYSGIRVS----------DNLPVAIKHVEKD-RISDWGELPNGTRV 58
Query: 194 PYEWQVYNTLG-GSHGVPRVHFKGRQGDYYVMVMDMLGP--SLWDVWNNNSHTMSIEMVA 250
P E + + G GV R+ + D +V++++ + P L+D + E+
Sbjct: 59 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERG-ALQEELAR 117
Query: 251 CIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMH 310
+ + + H+ G +H D+K EN L+ + +L L+D G +D+ ++
Sbjct: 118 SFFWQVLEAVRHCHNCGVLHRDIKDENILI----DLNRGELKLIDFGSGALLKDT---VY 170
Query: 311 VEYDQRPDVFRGTVRYA-----SVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQG 365
++D GT Y+ H + GR+ + + SL L ++ G +P++ +
Sbjct: 171 TDFD-------GTRVYSPPEWIRYHRYHGRSAA----VWSLGILLYDMVCGDIPFEHDEE 219
Query: 366 ENKGFLVCKKKMATSPDGLCCFCPA 390
+G + ++++++ L +C A
Sbjct: 220 IIRGQVFFRQRVSSECQHLIRWCLA 244
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 97/251 (38%), Gaps = 47/251 (18%)
Query: 140 MYRLERKLGKGGFGQVYVGRRV-----SPVNANERTGPGAVEVAL------KFEHRSSKG 188
++ L +G G +GQVY GR V + + + TG E+ K+ H +
Sbjct: 25 IFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIA 84
Query: 189 CNYGPPYEWQVYNTLGGSHGVPRVHFKGRQGDYYVMVMDMLGP-SLWD-VWNNNSHTMSI 246
YG + N G D +VM+ G S+ D + N +T+
Sbjct: 85 TYYGA---FIKKNPPG-------------MDDQLWLVMEFCGAGSVTDLIKNTKGNTLKE 128
Query: 247 EMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDST 306
E +A I E + L +H +H D+K +N LL + ++ LVD G++ + D T
Sbjct: 129 EWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLT-----ENAEVKLVDFGVSAQL-DRT 182
Query: 307 TGMHVEYDQRPDVFRGTVRYA-----SVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQ 361
G R + F GT + + + T + DL SL T I + G P
Sbjct: 183 VG-------RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLC 235
Query: 362 GYQGENKGFLV 372
FL+
Sbjct: 236 DMHPMRALFLI 246
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 68/168 (40%), Gaps = 14/168 (8%)
Query: 141 YRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVY 200
+ + + +G+G FG+V V + + ER + + R+ C E +
Sbjct: 76 FEIIKVIGRGAFGEVAVVK----MKNTERIYAMKILNKWEMLKRAETACFR----EERDV 127
Query: 201 NTLGGSHGVPRVHFKGRQGDYYVMVMDM-LGPSLWDVWNNNSHTMSIEMVACIAIEAISI 259
G + +H+ + ++ +VMD +G L + + + +M E +
Sbjct: 128 LVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLA 187
Query: 260 LEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTT 307
++ +H YVH D+KP+N LL G + L D G K D T
Sbjct: 188 IDSIHQLHYVHRDIKPDNVLLDVNG-----HIRLADFGSCLKMNDDGT 230
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 68/168 (40%), Gaps = 14/168 (8%)
Query: 141 YRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVY 200
+ + + +G+G FG+V V + + ER + + R+ C E +
Sbjct: 92 FEIIKVIGRGAFGEVAVVK----MKNTERIYAMKILNKWEMLKRAETACFR----EERDV 143
Query: 201 NTLGGSHGVPRVHFKGRQGDYYVMVMDM-LGPSLWDVWNNNSHTMSIEMVACIAIEAISI 259
G + +H+ + ++ +VMD +G L + + + +M E +
Sbjct: 144 LVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLA 203
Query: 260 LEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTT 307
++ +H YVH D+KP+N LL G + L D G K D T
Sbjct: 204 IDSIHQLHYVHRDIKPDNVLLDVNG-----HIRLADFGSCLKMNDDGT 246
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 90/225 (40%), Gaps = 29/225 (12%)
Query: 141 YRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSK-GCNYGPPYEWQV 199
+ + R LGKG FG VY+ R E+ + + + F+ + K G + E ++
Sbjct: 13 FEIGRPLGKGKFGNVYLAR--------EKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 64
Query: 200 YNTLGGSHGVPRVH--FKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAI 257
+ L + R++ F Y ++ LG ++ + + A E
Sbjct: 65 QSHLRHP-NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELA 121
Query: 258 SILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYDQRP 317
+ L HSK +H D+KPEN LLG G +L + + G W +H +R
Sbjct: 122 NALSYCHSKRVIHRDIKPENLLLGSAG-----ELKIANFG----W-----SVHAPSSRRT 167
Query: 318 DVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQG 362
+ GT+ Y GR + DL SL L G+ P++
Sbjct: 168 TLC-GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 211
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 141 YRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFE--HRSSKGCNYGPPYEWQ 198
+ + + +G+G FG+V V V NA++ A+++ K+E R+ C E +
Sbjct: 76 FEILKVIGRGAFGEVAV---VKLKNADKVF---AMKILNKWEMLKRAETACFR----EER 125
Query: 199 VYNTLGGSHGVPRVHFKGRQGDYYVMVMDM-LGPSLWDVWNNNSHTMSIEMVACIAIEAI 257
G S + +H+ + + +VMD +G L + + + EM E +
Sbjct: 126 DVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMV 185
Query: 258 SILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTT 307
++ +H YVH D+KP+N L+ G + L D G K + T
Sbjct: 186 IAIDSVHQLHYVHRDIKPDNILMDMNG-----HIRLADFGSCLKLMEDGT 230
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 65/168 (38%), Gaps = 22/168 (13%)
Query: 247 EMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRD-- 304
++++ I + S L +H++G H D+KPENFL + + K LVD GL+ ++
Sbjct: 168 KLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSFEIK---LVDFGLSKEFYKLN 224
Query: 305 ------STTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRL 358
TT Y P+V T + + D S L LL G +
Sbjct: 225 NGEYYGMTTKAGTPYFVAPEVLNTT----------NESYGPKCDAWSAGVLLHLLLMGAV 274
Query: 359 PWQGYQGENKGFLVCKKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDE 406
P+ G + V KK+ P R + ++N DE
Sbjct: 275 PFPGVNDADTISQVLNKKLCFENPNYNVLSPLA-RDLLSNLLNRNVDE 321
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 77/192 (40%), Gaps = 21/192 (10%)
Query: 119 GGEDEGSTAPLPEKIAVGGSPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVA 178
GG+ G + + S Y ++ +LGKG F V RR ++ TG +E A
Sbjct: 9 GGQQMGRGSEFMMNASTKFSDNYDVKEELGKGAFSVV---RRC----VHKTTG---LEFA 58
Query: 179 LKFEHRSSKGCNYGPPYEWQVYNTLGGSH-GVPRVHFKGRQGDYYVMVMDML-GPSLWDV 236
K + E + H + R+H ++ ++ +V D++ G L++
Sbjct: 59 AKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFED 118
Query: 237 WNNNSHTMSIEMVACIAIEAISILEKM---HSKGYVHGDVKPENFLLGPPGTPDEKKLFL 293
+ CI ILE + HS G VH ++KPEN LL K L
Sbjct: 119 IVAREFYSEADASHCIQ----QILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVK--L 172
Query: 294 VDLGLATKWRDS 305
D GLA + DS
Sbjct: 173 ADFGLAIEVNDS 184
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 86/239 (35%), Gaps = 55/239 (23%)
Query: 141 YRLERKLGKGGFGQVY--------------VGRRVSPVNANERTGPGAVEVALKFEHRSS 186
Y + LGKG FG+V V + S N + T VE+ K +H
Sbjct: 24 YNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDH--- 80
Query: 187 KGCNYGPPYEWQVYNTLGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSI 246
P +++ L S +Y++ G L+D S
Sbjct: 81 -------PNIMKLFEILEDS------------SSFYIVGELYTGGELFDEIIKRKR-FSE 120
Query: 247 EMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDST 306
A I + S + MH VH D+KPEN LL + K ++D GL+T ++ +T
Sbjct: 121 HDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIK--IIDFGLSTCFQQNT 178
Query: 307 T---GMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQG 362
+ Y P+V RGT + D+ S L LL G P+ G
Sbjct: 179 KMKDRIGTAYYIAPEVLRGTY-------------DEKCDVWSAGVILYILLSGTPPFYG 224
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 86/239 (35%), Gaps = 55/239 (23%)
Query: 141 YRLERKLGKGGFGQVY--------------VGRRVSPVNANERTGPGAVEVALKFEHRSS 186
Y + LGKG FG+V V + S N + T VE+ K +H
Sbjct: 24 YNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDH--- 80
Query: 187 KGCNYGPPYEWQVYNTLGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSI 246
P +++ L S +Y++ G L+D S
Sbjct: 81 -------PNIMKLFEILEDS------------SSFYIVGELYTGGELFDEIIKRKR-FSE 120
Query: 247 EMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDST 306
A I + S + MH VH D+KPEN LL + K ++D GL+T ++ +T
Sbjct: 121 HDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIK--IIDFGLSTCFQQNT 178
Query: 307 T---GMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQG 362
+ Y P+V RGT + D+ S L LL G P+ G
Sbjct: 179 KMKDRIGTAYYIAPEVLRGTY-------------DEKCDVWSAGVILYILLSGTPPFYG 224
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 47/110 (42%), Gaps = 23/110 (20%)
Query: 263 MHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYDQRPDVFRG 322
+H G VH D+KP NFL+ + L L+D G+A + + TT + D G
Sbjct: 171 IHQHGIVHSDLKPANFLIV------DGMLKLIDFGIANQMQPDTTSV------VKDSQVG 218
Query: 323 TVRYASVHAHLGRTGSRRD-----------DLESLAYTLIFLLRGRLPWQ 361
V Y A + SR + D+ SL L ++ G+ P+Q
Sbjct: 219 AVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ 268
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 86/207 (41%), Gaps = 17/207 (8%)
Query: 123 EGSTAPLPEKIAVGGSPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFE 182
E TA L G + L + LG G +G+V++ R++S + + A++V K
Sbjct: 38 ELRTANLTGHAEKVGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLY---AMKVLKKAT 94
Query: 183 HRSSKGCNYGPPYEWQVYNTLGGSHGVPRVHFKGRQGDYYVMVMDML-GPSLWDVWNNNS 241
E QV + S + +H+ + +++D + G L+ +
Sbjct: 95 IVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRE 154
Query: 242 HTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATK 301
E+ + E + LE +H G ++ D+K EN LL G + L D GL+ +
Sbjct: 155 RFTEHEVQIYVG-EIVLALEHLHKLGIIYRDIKLENILLDSNG-----HVVLTDFGLSKE 208
Query: 302 W-RDSTTGMH-----VEYDQRPDVFRG 322
+ D T + +EY PD+ RG
Sbjct: 209 FVADETERAYDFCGTIEY-MAPDIVRG 234
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 75/200 (37%), Gaps = 42/200 (21%)
Query: 141 YRLERKLGKGGFGQVY--------------VGRRVSPVNANERTGPGAVEVALKFEHRSS 186
Y + LGKG FG+V V + S N + T VE+ K +H
Sbjct: 24 YNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDH--- 80
Query: 187 KGCNYGPPYEWQVYNTLGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSI 246
P +++ L S V G+ Y G L+D S
Sbjct: 81 -------PNIMKLFEILEDSSSFYIV------GELYT------GGELFDEIIKRKR-FSE 120
Query: 247 EMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDST 306
A I + S + MH VH D+KPEN LL + K ++D GL+T ++ +T
Sbjct: 121 HDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIK--IIDFGLSTCFQQNT 178
Query: 307 T---GMHVEYDQRPDVFRGT 323
+ Y P+V RGT
Sbjct: 179 KMKDRIGTAYYIAPEVLRGT 198
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 58/136 (42%), Gaps = 29/136 (21%)
Query: 263 MHSKGYVHGDVKPENFLLGPPGTPDEK-KLFLVDLGLATKWRDSTTGMHVEYDQRPDVFR 321
+H G H D+KPEN LL DE+ L + D GLAT +R Y+ R +
Sbjct: 120 LHGIGITHRDIKPENLLL------DERDNLKISDFGLATVFR---------YNNRERLLN 164
Query: 322 ---GTVRYASVHAHLGRT-GSRRDDLESLAYTLIFLLRGRLPW-------QGYQG--ENK 368
GT+ Y + R + D+ S L +L G LPW Q Y E K
Sbjct: 165 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKK 224
Query: 369 GFLVCKKKMATSPDGL 384
+L KK+ ++P L
Sbjct: 225 TYLNPWKKIDSAPLAL 240
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 58/136 (42%), Gaps = 29/136 (21%)
Query: 263 MHSKGYVHGDVKPENFLLGPPGTPDEK-KLFLVDLGLATKWRDSTTGMHVEYDQRPDVFR 321
+H G H D+KPEN LL DE+ L + D GLAT +R Y+ R +
Sbjct: 121 LHGIGITHRDIKPENLLL------DERDNLKISDFGLATVFR---------YNNRERLLN 165
Query: 322 ---GTVRYASVHAHLGRT-GSRRDDLESLAYTLIFLLRGRLPW-------QGYQG--ENK 368
GT+ Y + R + D+ S L +L G LPW Q Y E K
Sbjct: 166 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKK 225
Query: 369 GFLVCKKKMATSPDGL 384
+L KK+ ++P L
Sbjct: 226 TYLNPWKKIDSAPLAL 241
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/190 (18%), Positives = 84/190 (44%), Gaps = 15/190 (7%)
Query: 230 GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEK 289
G SL+ + + ++ + IA + ++ +H+K +H D+K N L T
Sbjct: 103 GSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNT---- 158
Query: 290 KLFLVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYAS---VHAHLGRTGSRRDDLESL 346
+ + D GLAT+ + +G H +++Q G++ + + + S + D+ +
Sbjct: 159 -VKIGDFGLATE-KSRWSGSH-QFEQ----LSGSILWMAPEVIRMQDSNPYSFQSDVYAF 211
Query: 347 AYTLIFLLRGRLPWQGYQGENKGF-LVCKKKMATSPDGLCCFCPAPFRQFVEYVVNLKFD 405
L L+ G+LP+ ++ +V + ++ + CP ++ + + K D
Sbjct: 212 GIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRD 271
Query: 406 EEPNYAKYIS 415
E P++ + ++
Sbjct: 272 ERPSFPRILA 281
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 125/301 (41%), Gaps = 61/301 (20%)
Query: 109 GGPSND----KANAGGEDEGSTAPLPEKIAVGGSPMYRLERKLGKGGFGQVYVGRRVSPV 164
P ND K G E E PL + VG P+ LG GGFG VY G RVS
Sbjct: 1 AAPCNDLHATKLAPGKEKE----PLESQYQVG--PL------LGSGGFGSVYSGIRVS-- 46
Query: 165 NANERTGPGAVEVALKFEHRSSKGCNYGP-------PYEWQVYNTLG-GSHGVPRVHFKG 216
+ VA+K + + ++G P E + + G GV R+
Sbjct: 47 --------DNLPVAIKHVEKD-RISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWF 97
Query: 217 RQGDYYVMVMDMLGP--SLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVK 274
+ D +V++++ P L+D + E+ + + + H+ G +H D+K
Sbjct: 98 ERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCHNCGVLHRDIK 156
Query: 275 PENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYA-----SV 329
EN L+ + +L L+D G +D+ ++ ++D GT Y+
Sbjct: 157 DENILI----DLNRGELKLIDFGSGALLKDT---VYTDFD-------GTRVYSPPEWIRY 202
Query: 330 HAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCKKKMATSPDGLCCFCP 389
H + GR+ + + SL L ++ G +P++ + +G + ++++++ L +C
Sbjct: 203 HRYHGRSAA----VWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCL 258
Query: 390 A 390
A
Sbjct: 259 A 259
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 86/226 (38%), Gaps = 34/226 (15%)
Query: 147 LGKGGFGQVYVGRR--------VSPVNANERTGPGAVEVALKFEHRSS---KGCNYGPPY 195
+G GGFGQV+ + + V N V+ K +H + GC G Y
Sbjct: 20 IGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAEREVKALAKLDHVNIVHYNGCWDGFDY 79
Query: 196 EWQVYN-TLGGSHGVPRVHFKGRQGDYYVMV--MDMLGPSLWDVWNNNSHTMSIEMVACI 252
+ + + +L S P + + M+ + W ++ V +
Sbjct: 80 DPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKV--L 137
Query: 253 AIEAISILEK----MHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTG 308
A+E + K +HSK +H D+KP N L D K++ + D GL T ++
Sbjct: 138 ALELFEQITKGVDYIHSKKLIHRDLKPSNIFL-----VDTKQVKIGDFGLVTSLKN---- 188
Query: 309 MHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLL 354
D + +GT+RY S + + DL +L L LL
Sbjct: 189 -----DGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 58/136 (42%), Gaps = 29/136 (21%)
Query: 263 MHSKGYVHGDVKPENFLLGPPGTPDEK-KLFLVDLGLATKWRDSTTGMHVEYDQRPDVFR 321
+H G H D+KPEN LL DE+ L + D GLAT +R Y+ R +
Sbjct: 120 LHGIGITHRDIKPENLLL------DERDNLKISDFGLATVFR---------YNNRERLLN 164
Query: 322 ---GTVRYASVHAHLGRT-GSRRDDLESLAYTLIFLLRGRLPW-------QGYQG--ENK 368
GT+ Y + R + D+ S L +L G LPW Q Y E K
Sbjct: 165 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKK 224
Query: 369 GFLVCKKKMATSPDGL 384
+L KK+ ++P L
Sbjct: 225 TYLNPWKKIDSAPLAL 240
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/190 (18%), Positives = 84/190 (44%), Gaps = 15/190 (7%)
Query: 230 GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEK 289
G SL+ + + ++ + IA + ++ +H+K +H D+K N L T
Sbjct: 103 GSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNT---- 158
Query: 290 KLFLVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYAS---VHAHLGRTGSRRDDLESL 346
+ + D GLAT+ + +G H +++Q G++ + + + S + D+ +
Sbjct: 159 -VKIGDFGLATE-KSRWSGSH-QFEQ----LSGSILWMAPEVIRMQDSNPYSFQSDVYAF 211
Query: 347 AYTLIFLLRGRLPWQGYQGENKGF-LVCKKKMATSPDGLCCFCPAPFRQFVEYVVNLKFD 405
L L+ G+LP+ ++ +V + ++ + CP ++ + + K D
Sbjct: 212 GIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRD 271
Query: 406 EEPNYAKYIS 415
E P++ + ++
Sbjct: 272 ERPSFPRILA 281
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 58/136 (42%), Gaps = 29/136 (21%)
Query: 263 MHSKGYVHGDVKPENFLLGPPGTPDEK-KLFLVDLGLATKWRDSTTGMHVEYDQRPDVFR 321
+H G H D+KPEN LL DE+ L + D GLAT +R Y+ R +
Sbjct: 121 LHGIGITHRDIKPENLLL------DERDNLKISDFGLATVFR---------YNNRERLLN 165
Query: 322 ---GTVRYASVHAHLGRT-GSRRDDLESLAYTLIFLLRGRLPW-------QGYQG--ENK 368
GT+ Y + R + D+ S L +L G LPW Q Y E K
Sbjct: 166 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKK 225
Query: 369 GFLVCKKKMATSPDGL 384
+L KK+ ++P L
Sbjct: 226 TYLNPWKKIDSAPLAL 241
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 58/136 (42%), Gaps = 29/136 (21%)
Query: 263 MHSKGYVHGDVKPENFLLGPPGTPDEK-KLFLVDLGLATKWRDSTTGMHVEYDQRPDVFR 321
+H G H D+KPEN LL DE+ L + D GLAT +R Y+ R +
Sbjct: 121 LHGIGITHRDIKPENLLL------DERDNLKISDFGLATVFR---------YNNRERLLN 165
Query: 322 ---GTVRYASVHAHLGRT-GSRRDDLESLAYTLIFLLRGRLPW-------QGYQG--ENK 368
GT+ Y + R + D+ S L +L G LPW Q Y E K
Sbjct: 166 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKK 225
Query: 369 GFLVCKKKMATSPDGL 384
+L KK+ ++P L
Sbjct: 226 TYLNPWKKIDSAPLAL 241
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 58/136 (42%), Gaps = 29/136 (21%)
Query: 263 MHSKGYVHGDVKPENFLLGPPGTPDEK-KLFLVDLGLATKWRDSTTGMHVEYDQRPDVFR 321
+H G H D+KPEN LL DE+ L + D GLAT +R Y+ R +
Sbjct: 121 LHGIGITHRDIKPENLLL------DERDNLKISDFGLATVFR---------YNNRERLLN 165
Query: 322 ---GTVRYASVHAHLGRT-GSRRDDLESLAYTLIFLLRGRLPW-------QGYQG--ENK 368
GT+ Y + R + D+ S L +L G LPW Q Y E K
Sbjct: 166 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKK 225
Query: 369 GFLVCKKKMATSPDGL 384
+L KK+ ++P L
Sbjct: 226 TYLNPWKKIDSAPLAL 241
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 58/136 (42%), Gaps = 29/136 (21%)
Query: 263 MHSKGYVHGDVKPENFLLGPPGTPDEK-KLFLVDLGLATKWRDSTTGMHVEYDQRPDVFR 321
+H G H D+KPEN LL DE+ L + D GLAT +R Y+ R +
Sbjct: 121 LHGIGITHRDIKPENLLL------DERDNLKISDFGLATVFR---------YNNRERLLN 165
Query: 322 ---GTVRYASVHAHLGRT-GSRRDDLESLAYTLIFLLRGRLPW-------QGYQG--ENK 368
GT+ Y + R + D+ S L +L G LPW Q Y E K
Sbjct: 166 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKK 225
Query: 369 GFLVCKKKMATSPDGL 384
+L KK+ ++P L
Sbjct: 226 TYLNPWKKIDSAPLAL 241
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 125/301 (41%), Gaps = 61/301 (20%)
Query: 109 GGPSND----KANAGGEDEGSTAPLPEKIAVGGSPMYRLERKLGKGGFGQVYVGRRVSPV 164
P ND K G E E PL + VG P+ LG GGFG VY G RVS
Sbjct: 14 AAPCNDLHATKLAPGKEKE----PLESQYQVG--PL------LGSGGFGSVYSGIRVS-- 59
Query: 165 NANERTGPGAVEVALKFEHRSSKGCNYGP-------PYEWQVYNTLG-GSHGVPRVHFKG 216
+ VA+K + + ++G P E + + G GV R+
Sbjct: 60 --------DNLPVAIKHVEKD-RISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWF 110
Query: 217 RQGDYYVMVMDMLGP--SLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVK 274
+ D +V++++ P L+D + E+ + + + H+ G +H D+K
Sbjct: 111 ERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCHNCGVLHRDIK 169
Query: 275 PENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYA-----SV 329
EN L+ + +L L+D G +D+ ++ ++D GT Y+
Sbjct: 170 DENILI----DLNRGELKLIDFGSGALLKDT---VYTDFD-------GTRVYSPPEWIRY 215
Query: 330 HAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCKKKMATSPDGLCCFCP 389
H + GR+ + + SL L ++ G +P++ + +G + ++++++ L +C
Sbjct: 216 HRYHGRSAA----VWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCL 271
Query: 390 A 390
A
Sbjct: 272 A 272
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 58/136 (42%), Gaps = 29/136 (21%)
Query: 263 MHSKGYVHGDVKPENFLLGPPGTPDEK-KLFLVDLGLATKWRDSTTGMHVEYDQRPDVFR 321
+H G H D+KPEN LL DE+ L + D GLAT +R Y+ R +
Sbjct: 121 LHGIGITHRDIKPENLLL------DERDNLKISDFGLATVFR---------YNNRERLLN 165
Query: 322 ---GTVRYASVHAHLGRT-GSRRDDLESLAYTLIFLLRGRLPW-------QGYQG--ENK 368
GT+ Y + R + D+ S L +L G LPW Q Y E K
Sbjct: 166 KMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKK 225
Query: 369 GFLVCKKKMATSPDGL 384
+L KK+ ++P L
Sbjct: 226 TYLNPWKKIDSAPLAL 241
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 58/136 (42%), Gaps = 29/136 (21%)
Query: 263 MHSKGYVHGDVKPENFLLGPPGTPDEK-KLFLVDLGLATKWRDSTTGMHVEYDQRPDVFR 321
+H G H D+KPEN LL DE+ L + D GLAT +R Y+ R +
Sbjct: 121 LHGIGITHRDIKPENLLL------DERDNLKISDFGLATVFR---------YNNRERLLN 165
Query: 322 ---GTVRYASVHAHLGRT-GSRRDDLESLAYTLIFLLRGRLPW-------QGYQG--ENK 368
GT+ Y + R + D+ S L +L G LPW Q Y E K
Sbjct: 166 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKK 225
Query: 369 GFLVCKKKMATSPDGL 384
+L KK+ ++P L
Sbjct: 226 TYLNPWKKIDSAPLAL 241
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 58/136 (42%), Gaps = 29/136 (21%)
Query: 263 MHSKGYVHGDVKPENFLLGPPGTPDEK-KLFLVDLGLATKWRDSTTGMHVEYDQRPDVFR 321
+H G H D+KPEN LL DE+ L + D GLAT +R Y+ R +
Sbjct: 120 LHGIGITHRDIKPENLLL------DERDNLKISDFGLATVFR---------YNNRERLLN 164
Query: 322 ---GTVRYASVHAHLGRT-GSRRDDLESLAYTLIFLLRGRLPW-------QGYQG--ENK 368
GT+ Y + R + D+ S L +L G LPW Q Y E K
Sbjct: 165 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKK 224
Query: 369 GFLVCKKKMATSPDGL 384
+L KK+ ++P L
Sbjct: 225 TYLNPWKKIDSAPLAL 240
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 58/136 (42%), Gaps = 29/136 (21%)
Query: 263 MHSKGYVHGDVKPENFLLGPPGTPDEK-KLFLVDLGLATKWRDSTTGMHVEYDQRPDVFR 321
+H G H D+KPEN LL DE+ L + D GLAT +R Y+ R +
Sbjct: 120 LHGIGITHRDIKPENLLL------DERDNLKISDFGLATVFR---------YNNRERLLN 164
Query: 322 ---GTVRYASVHAHLGRT-GSRRDDLESLAYTLIFLLRGRLPW-------QGYQG--ENK 368
GT+ Y + R + D+ S L +L G LPW Q Y E K
Sbjct: 165 KMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKK 224
Query: 369 GFLVCKKKMATSPDGL 384
+L KK+ ++P L
Sbjct: 225 TYLNPWKKIDSAPLAL 240
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 58/136 (42%), Gaps = 29/136 (21%)
Query: 263 MHSKGYVHGDVKPENFLLGPPGTPDEK-KLFLVDLGLATKWRDSTTGMHVEYDQRPDVFR 321
+H G H D+KPEN LL DE+ L + D GLAT +R Y+ R +
Sbjct: 120 LHGIGITHRDIKPENLLL------DERDNLKISDFGLATVFR---------YNNRERLLN 164
Query: 322 ---GTVRYASVHAHLGRT-GSRRDDLESLAYTLIFLLRGRLPW-------QGYQG--ENK 368
GT+ Y + R + D+ S L +L G LPW Q Y E K
Sbjct: 165 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKK 224
Query: 369 GFLVCKKKMATSPDGL 384
+L KK+ ++P L
Sbjct: 225 TYLNPWKKIDSAPLAL 240
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 125/301 (41%), Gaps = 61/301 (20%)
Query: 109 GGPSND----KANAGGEDEGSTAPLPEKIAVGGSPMYRLERKLGKGGFGQVYVGRRVSPV 164
P ND K G E E PL + VG P+ LG GGFG VY G RVS
Sbjct: 29 AAPCNDLHATKLAPGKEKE----PLESQYQVG--PL------LGSGGFGSVYSGIRVS-- 74
Query: 165 NANERTGPGAVEVALKFEHRSSKGCNYGP-------PYEWQVYNTLG-GSHGVPRVHFKG 216
+ VA+K + + ++G P E + + G GV R+
Sbjct: 75 --------DNLPVAIKHVEKD-RISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWF 125
Query: 217 RQGDYYVMVMDMLGP--SLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVK 274
+ D +V++++ P L+D + E+ + + + H+ G +H D+K
Sbjct: 126 ERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCHNCGVLHRDIK 184
Query: 275 PENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYA-----SV 329
EN L+ + +L L+D G +D+ ++ ++D GT Y+
Sbjct: 185 DENILI----DLNRGELKLIDFGSGALLKDT---VYTDFD-------GTRVYSPPEWIRY 230
Query: 330 HAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCKKKMATSPDGLCCFCP 389
H + GR+ + + SL L ++ G +P++ + +G + ++++++ L +C
Sbjct: 231 HRYHGRSAA----VWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCL 286
Query: 390 A 390
A
Sbjct: 287 A 287
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 58/136 (42%), Gaps = 29/136 (21%)
Query: 263 MHSKGYVHGDVKPENFLLGPPGTPDEK-KLFLVDLGLATKWRDSTTGMHVEYDQRPDVFR 321
+H G H D+KPEN LL DE+ L + D GLAT +R Y+ R +
Sbjct: 119 LHGIGITHRDIKPENLLL------DERDNLKISDFGLATVFR---------YNNRERLLN 163
Query: 322 ---GTVRYASVHAHLGRT-GSRRDDLESLAYTLIFLLRGRLPW-------QGYQG--ENK 368
GT+ Y + R + D+ S L +L G LPW Q Y E K
Sbjct: 164 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKK 223
Query: 369 GFLVCKKKMATSPDGL 384
+L KK+ ++P L
Sbjct: 224 TYLNPWKKIDSAPLAL 239
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 56/135 (41%), Gaps = 27/135 (20%)
Query: 263 MHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYDQRPDVFR- 321
+H G H D+KPEN LL + L + D GLAT +R Y+ R +
Sbjct: 121 LHGIGITHRDIKPENLLLD-----ERDNLKISDFGLATVFR---------YNNRERLLNK 166
Query: 322 --GTVRYASVHAHLGRT-GSRRDDLESLAYTLIFLLRGRLPW-------QGYQG--ENKG 369
GT+ Y + R + D+ S L +L G LPW Q Y E K
Sbjct: 167 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT 226
Query: 370 FLVCKKKMATSPDGL 384
+L KK+ ++P L
Sbjct: 227 YLNPWKKIDSAPLAL 241
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 58/136 (42%), Gaps = 29/136 (21%)
Query: 263 MHSKGYVHGDVKPENFLLGPPGTPDEK-KLFLVDLGLATKWRDSTTGMHVEYDQRPDVFR 321
+H G H D+KPEN LL DE+ L + D GLAT +R Y+ R +
Sbjct: 120 LHGIGITHRDIKPENLLL------DERDNLKISDFGLATVFR---------YNNRERLLN 164
Query: 322 ---GTVRYASVHAHLGRT-GSRRDDLESLAYTLIFLLRGRLPW-------QGYQG--ENK 368
GT+ Y + R + D+ S L +L G LPW Q Y E K
Sbjct: 165 KMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSXQEYSDWKEKK 224
Query: 369 GFLVCKKKMATSPDGL 384
+L KK+ ++P L
Sbjct: 225 TYLNPWKKIDSAPLAL 240
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 58/136 (42%), Gaps = 29/136 (21%)
Query: 263 MHSKGYVHGDVKPENFLLGPPGTPDEK-KLFLVDLGLATKWRDSTTGMHVEYDQRPDVFR 321
+H G H D+KPEN LL DE+ L + D GLAT +R Y+ R +
Sbjct: 120 LHGIGITHRDIKPENLLL------DERDNLKISDFGLATVFR---------YNNRERLLN 164
Query: 322 ---GTVRYASVHAHLGRT-GSRRDDLESLAYTLIFLLRGRLPW-------QGYQG--ENK 368
GT+ Y + R + D+ S L +L G LPW Q Y E K
Sbjct: 165 KMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKK 224
Query: 369 GFLVCKKKMATSPDGL 384
+L KK+ ++P L
Sbjct: 225 TYLNPWKKIDSAPLAL 240
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 58/136 (42%), Gaps = 29/136 (21%)
Query: 263 MHSKGYVHGDVKPENFLLGPPGTPDEK-KLFLVDLGLATKWRDSTTGMHVEYDQRPDVFR 321
+H G H D+KPEN LL DE+ L + D GLAT +R Y+ R +
Sbjct: 120 LHGIGITHRDIKPENLLL------DERDNLKISDFGLATVFR---------YNNRERLLN 164
Query: 322 ---GTVRYASVHAHLGRT-GSRRDDLESLAYTLIFLLRGRLPW-------QGYQG--ENK 368
GT+ Y + R + D+ S L +L G LPW Q Y E K
Sbjct: 165 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKK 224
Query: 369 GFLVCKKKMATSPDGL 384
+L KK+ ++P L
Sbjct: 225 TYLNPWKKIDSAPLAL 240
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 69/161 (42%), Gaps = 14/161 (8%)
Query: 205 GSHGVPRVHFKGRQGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKM 263
G + ++H + +VM++L G L++ H E + I + +S + M
Sbjct: 64 GHPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETE-ASYIMRKLVSAVSHM 122
Query: 264 HSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYDQRPDVFRGT 323
H G VH D+KPEN L D ++ ++D G A + + F T
Sbjct: 123 HDVGVVHRDLKPENLLFTDEN--DNLEIKIIDFGFARLKPPDNQPL------KTPCF--T 172
Query: 324 VRYASVHAHLGRTG-SRRDDLESLAYTLIFLLRGRLPWQGY 363
+ YA+ L + G DL SL L +L G++P+Q +
Sbjct: 173 LHYAAPEL-LNQNGYDESCDLWSLGVILYTMLSGQVPFQSH 212
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 56/135 (41%), Gaps = 27/135 (20%)
Query: 263 MHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYDQRPDVFR- 321
+H G H D+KPEN LL + L + D GLAT +R Y+ R +
Sbjct: 120 LHGIGITHRDIKPENLLLD-----ERDNLKISDFGLATVFR---------YNNRERLLNK 165
Query: 322 --GTVRYASVHAHLGRT-GSRRDDLESLAYTLIFLLRGRLPW-------QGYQG--ENKG 369
GT+ Y + R + D+ S L +L G LPW Q Y E K
Sbjct: 166 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT 225
Query: 370 FLVCKKKMATSPDGL 384
+L KK+ ++P L
Sbjct: 226 YLNPWKKIDSAPLAL 240
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 56/135 (41%), Gaps = 27/135 (20%)
Query: 263 MHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYDQRPDVFR- 321
+H G H D+KPEN LL + L + D GLAT +R Y+ R +
Sbjct: 120 LHGIGITHRDIKPENLLLD-----ERDNLKISDFGLATVFR---------YNNRERLLNK 165
Query: 322 --GTVRYASVHAHLGRT-GSRRDDLESLAYTLIFLLRGRLPW-------QGYQG--ENKG 369
GT+ Y + R + D+ S L +L G LPW Q Y E K
Sbjct: 166 MXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT 225
Query: 370 FLVCKKKMATSPDGL 384
+L KK+ ++P L
Sbjct: 226 YLNPWKKIDSAPLAL 240
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 77/193 (39%), Gaps = 30/193 (15%)
Query: 147 LGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNTLGGS 206
+G G FG V+ + V + EVA+K + + N E Q+ +
Sbjct: 48 IGNGSFGVVFQAKLVE-----------SDEVAIKKVLQDKRFKNR----ELQIMRIVKHP 92
Query: 207 HGVPRVHFKGRQGD-----YYVMVMDMLGPSLWDV---WNNNSHTMSIEMVACIAIEAIS 258
+ V F GD + +V++ + +++ + TM + ++ + +
Sbjct: 93 NVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLR 152
Query: 259 ILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKW---RDSTTGMHVEYDQ 315
L +HS G H D+KP+N LL PP L L+D G A + + + Y +
Sbjct: 153 SLAYIHSIGICHRDIKPQNLLLDPPSG----VLKLIDFGSAKILIAGEPNVSXICSRYYR 208
Query: 316 RPDVFRGTVRYAS 328
P++ G Y +
Sbjct: 209 APELIFGATNYTT 221
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 58/265 (21%), Positives = 114/265 (43%), Gaps = 45/265 (16%)
Query: 141 YRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGP------- 193
Y++ LG GGFG VY G RVS + VA+K + + ++G
Sbjct: 11 YQVGPLLGSGGFGSVYSGIRVS----------DNLPVAIKHVEKD-RISDWGELPNGTRV 59
Query: 194 PYEWQVYNTLG-GSHGVPRVHFKGRQGDYYVMVMDMLGP--SLWDVWNNNSHTMSIEMVA 250
P E + + G GV R+ + D +V++++ P L+D + E+
Sbjct: 60 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELAR 118
Query: 251 CIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMH 310
+ + + H+ G +H D+K EN L+ + +L L+D G +D+ ++
Sbjct: 119 SFFWQVLEAVRHCHNCGVLHRDIKDENILI----DLNRGELKLIDFGSGALLKDT---VY 171
Query: 311 VEYDQRPDVFRGTVRYA-----SVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQG 365
++D GT Y+ H + GR+ + + SL L ++ G +P++ +
Sbjct: 172 TDFD-------GTRVYSPPEWIRYHRYHGRSAA----VWSLGILLYDMVCGDIPFEHDEE 220
Query: 366 ENKGFLVCKKKMATSPDGLCCFCPA 390
+G + ++++++ L +C A
Sbjct: 221 IIRGQVFFRQRVSSECQHLIRWCLA 245
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 58/265 (21%), Positives = 114/265 (43%), Gaps = 45/265 (16%)
Query: 141 YRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGP------- 193
Y++ LG GGFG VY G RVS + VA+K + + ++G
Sbjct: 11 YQVGPLLGSGGFGSVYSGIRVS----------DNLPVAIKHVEKD-RISDWGELPNGTRV 59
Query: 194 PYEWQVYNTLG-GSHGVPRVHFKGRQGDYYVMVMDMLGP--SLWDVWNNNSHTMSIEMVA 250
P E + + G GV R+ + D +V++++ P L+D + E+
Sbjct: 60 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELAR 118
Query: 251 CIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMH 310
+ + + H+ G +H D+K EN L+ + +L L+D G +D+ ++
Sbjct: 119 SFFWQVLEAVRHCHNCGVLHRDIKDENILI----DLNRGELKLIDFGSGALLKDT---VY 171
Query: 311 VEYDQRPDVFRGTVRYA-----SVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQG 365
++D GT Y+ H + GR+ + + SL L ++ G +P++ +
Sbjct: 172 TDFD-------GTRVYSPPEWIRYHRYHGRSAA----VWSLGILLYDMVCGDIPFEHDEE 220
Query: 366 ENKGFLVCKKKMATSPDGLCCFCPA 390
+G + ++++++ L +C A
Sbjct: 221 IIRGQVFFRQRVSSECQHLIRWCLA 245
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 125/301 (41%), Gaps = 61/301 (20%)
Query: 109 GGPSND----KANAGGEDEGSTAPLPEKIAVGGSPMYRLERKLGKGGFGQVYVGRRVSPV 164
P ND K G E E PL + VG P+ LG GGFG VY G RVS
Sbjct: 2 AAPCNDLHATKLAPGKEKE----PLESQYQVG--PL------LGSGGFGSVYSGIRVS-- 47
Query: 165 NANERTGPGAVEVALKFEHRSSKGCNYGP-------PYEWQVYNTLG-GSHGVPRVHFKG 216
+ VA+K + + ++G P E + + G GV R+
Sbjct: 48 --------DNLPVAIKHVEKD-RISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWF 98
Query: 217 RQGDYYVMVMDMLGP--SLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVK 274
+ D +V++++ P L+D + E+ + + + H+ G +H D+K
Sbjct: 99 ERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCHNCGVLHRDIK 157
Query: 275 PENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYA-----SV 329
EN L+ + +L L+D G +D+ ++ ++D GT Y+
Sbjct: 158 DENILI----DLNRGELKLIDFGSGALLKDT---VYTDFD-------GTRVYSPPEWIRY 203
Query: 330 HAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCKKKMATSPDGLCCFCP 389
H + GR+ + + SL L ++ G +P++ + +G + ++++++ L +C
Sbjct: 204 HRYHGRSAA----VWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCL 259
Query: 390 A 390
A
Sbjct: 260 A 260
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 56/135 (41%), Gaps = 27/135 (20%)
Query: 263 MHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYDQRPDVFR- 321
+H G H D+KPEN LL + L + D GLAT +R Y+ R +
Sbjct: 120 LHGIGITHRDIKPENLLLD-----ERDNLKISDFGLATVFR---------YNNRERLLNK 165
Query: 322 --GTVRYASVHAHLGRT-GSRRDDLESLAYTLIFLLRGRLPW-------QGYQG--ENKG 369
GT+ Y + R + D+ S L +L G LPW Q Y E K
Sbjct: 166 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT 225
Query: 370 FLVCKKKMATSPDGL 384
+L KK+ ++P L
Sbjct: 226 YLNPWKKIDSAPLAL 240
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 58/265 (21%), Positives = 114/265 (43%), Gaps = 45/265 (16%)
Query: 141 YRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGP------- 193
Y++ LG GGFG VY G RVS + VA+K + + ++G
Sbjct: 10 YQVGPLLGSGGFGSVYSGIRVS----------DNLPVAIKHVEKD-RISDWGELPNGTRV 58
Query: 194 PYEWQVYNTLG-GSHGVPRVHFKGRQGDYYVMVMDMLGP--SLWDVWNNNSHTMSIEMVA 250
P E + + G GV R+ + D +V++++ P L+D + E+
Sbjct: 59 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELAR 117
Query: 251 CIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMH 310
+ + + H+ G +H D+K EN L+ + +L L+D G +D+ ++
Sbjct: 118 SFFWQVLEAVRHCHNCGVLHRDIKDENILI----DLNRGELKLIDFGSGALLKDT---VY 170
Query: 311 VEYDQRPDVFRGTVRYA-----SVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQG 365
++D GT Y+ H + GR+ + + SL L ++ G +P++ +
Sbjct: 171 TDFD-------GTRVYSPPEWIRYHRYHGRSAA----VWSLGILLYDMVCGDIPFEHDEE 219
Query: 366 ENKGFLVCKKKMATSPDGLCCFCPA 390
+G + ++++++ L +C A
Sbjct: 220 IIRGQVFFRQRVSSECQHLIRWCLA 244
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 58/265 (21%), Positives = 114/265 (43%), Gaps = 45/265 (16%)
Query: 141 YRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGP------- 193
Y++ LG GGFG VY G RVS + VA+K + + ++G
Sbjct: 11 YQVGPLLGSGGFGSVYSGIRVS----------DNLPVAIKHVEKD-RISDWGELPNGTRV 59
Query: 194 PYEWQVYNTLG-GSHGVPRVHFKGRQGDYYVMVMDMLGP--SLWDVWNNNSHTMSIEMVA 250
P E + + G GV R+ + D +V++++ P L+D + E+
Sbjct: 60 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELAR 118
Query: 251 CIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMH 310
+ + + H+ G +H D+K EN L+ + +L L+D G +D+ ++
Sbjct: 119 SFFWQVLEAVRHCHNCGVLHRDIKDENILI----DLNRGELKLIDFGSGALLKDT---VY 171
Query: 311 VEYDQRPDVFRGTVRYA-----SVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQG 365
++D GT Y+ H + GR+ + + SL L ++ G +P++ +
Sbjct: 172 TDFD-------GTRVYSPPEWIRYHRYHGRSAA----VWSLGILLYDMVCGDIPFEHDEE 220
Query: 366 ENKGFLVCKKKMATSPDGLCCFCPA 390
+G + ++++++ L +C A
Sbjct: 221 IIRGQVFFRQRVSSECQHLIRWCLA 245
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 58/136 (42%), Gaps = 29/136 (21%)
Query: 263 MHSKGYVHGDVKPENFLLGPPGTPDEK-KLFLVDLGLATKWRDSTTGMHVEYDQRPDVFR 321
+H G H D+KPEN LL DE+ L + D GLAT +R Y+ R +
Sbjct: 120 LHGIGITHRDIKPENLLL------DERDNLKISDFGLATVFR---------YNNRERLLN 164
Query: 322 ---GTVRYASVHAHLGRT-GSRRDDLESLAYTLIFLLRGRLPW-------QGYQG--ENK 368
GT+ Y + R + D+ S L +L G LPW Q Y E K
Sbjct: 165 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKK 224
Query: 369 GFLVCKKKMATSPDGL 384
+L KK+ ++P L
Sbjct: 225 TYLNPWKKIDSAPLAL 240
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 58/265 (21%), Positives = 113/265 (42%), Gaps = 45/265 (16%)
Query: 141 YRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGP------- 193
Y++ LG GGFG VY G RVS + VA+K + + ++G
Sbjct: 6 YQVGPLLGSGGFGSVYSGIRVS----------DNLPVAIKHVEKD-RISDWGELPNGTRV 54
Query: 194 PYEWQVYNTLG-GSHGVPRVHFKGRQGDYYVMVMDMLGP--SLWDVWNNNSHTMSIEMVA 250
P E + + G GV R+ + D +V++++ P L+D + E+
Sbjct: 55 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELAR 113
Query: 251 CIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMH 310
+ + + H+ G +H D+K EN L+ + +L L+D G +D+ ++
Sbjct: 114 SFFWQVLEAVRHCHNXGVLHRDIKDENILI----DLNRGELKLIDFGSGALLKDT---VY 166
Query: 311 VEYDQRPDVFRGTVRYA-----SVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQG 365
++D GT Y+ H + GR+ + + SL L ++ G +P++ +
Sbjct: 167 TDFD-------GTRVYSPPEWIRYHRYHGRSAA----VWSLGILLYDMVCGDIPFEHDEE 215
Query: 366 ENKGFLVCKKKMATSPDGLCCFCPA 390
+G + +++++ L +C A
Sbjct: 216 IIRGQVFFRQRVSXECQHLIRWCLA 240
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Query: 219 GDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPEN 277
GD +VM+ L G SL DV M +A + E + LE +HS +H D+K +N
Sbjct: 89 GDELWVVMEYLAGGSLTDVVTETC--MDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDN 146
Query: 278 FLLGPPGT 285
LLG G+
Sbjct: 147 ILLGMDGS 154
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 58/265 (21%), Positives = 114/265 (43%), Gaps = 45/265 (16%)
Query: 141 YRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGP------- 193
Y++ LG GGFG VY G RVS + VA+K + + ++G
Sbjct: 9 YQVGPLLGSGGFGSVYSGIRVS----------DNLPVAIKHVEKD-RISDWGELPNGTRV 57
Query: 194 PYEWQVYNTLG-GSHGVPRVHFKGRQGDYYVMVMDMLGP--SLWDVWNNNSHTMSIEMVA 250
P E + + G GV R+ + D +V++++ P L+D + E+
Sbjct: 58 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELAR 116
Query: 251 CIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMH 310
+ + + H+ G +H D+K EN L+ + +L L+D G +D+ ++
Sbjct: 117 SFFWQVLEAVRHCHNCGVLHRDIKDENILI----DLNRGELKLIDFGSGALLKDT---VY 169
Query: 311 VEYDQRPDVFRGTVRYA-----SVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQG 365
++D GT Y+ H + GR+ + + SL L ++ G +P++ +
Sbjct: 170 TDFD-------GTRVYSPPEWIRYHRYHGRSAA----VWSLGILLYDMVCGDIPFEHDEE 218
Query: 366 ENKGFLVCKKKMATSPDGLCCFCPA 390
+G + ++++++ L +C A
Sbjct: 219 IIRGQVFFRQRVSSECQHLIRWCLA 243
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 58/265 (21%), Positives = 114/265 (43%), Gaps = 45/265 (16%)
Query: 141 YRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGP------- 193
Y++ LG GGFG VY G RVS + VA+K + + ++G
Sbjct: 6 YQVGPLLGSGGFGSVYSGIRVS----------DNLPVAIKHVEKD-RISDWGELPNGTRV 54
Query: 194 PYEWQVYNTLG-GSHGVPRVHFKGRQGDYYVMVMDMLGP--SLWDVWNNNSHTMSIEMVA 250
P E + + G GV R+ + D +V++++ P L+D + E+
Sbjct: 55 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELAR 113
Query: 251 CIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMH 310
+ + + H+ G +H D+K EN L+ + +L L+D G +D+ ++
Sbjct: 114 SFFWQVLEAVRHCHNCGVLHRDIKDENILI----DLNRGELKLIDFGSGALLKDT---VY 166
Query: 311 VEYDQRPDVFRGTVRYA-----SVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQG 365
++D GT Y+ H + GR+ + + SL L ++ G +P++ +
Sbjct: 167 TDFD-------GTRVYSPPEWIRYHRYHGRSAA----VWSLGILLYDMVCGDIPFEHDEE 215
Query: 366 ENKGFLVCKKKMATSPDGLCCFCPA 390
+G + ++++++ L +C A
Sbjct: 216 IIRGQVFFRQRVSSECQHLIRWCLA 240
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Query: 219 GDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPEN 277
GD +VM+ L G SL DV M +A + E + LE +HS +H D+K +N
Sbjct: 89 GDELWVVMEYLAGGSLTDVVTETC--MDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDN 146
Query: 278 FLLGPPGT 285
LLG G+
Sbjct: 147 ILLGMDGS 154
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 71/173 (41%), Gaps = 21/173 (12%)
Query: 138 SPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEW 197
S Y ++ +LGKG F V RR ++ TG +E A K + E
Sbjct: 4 SDNYDVKEELGKGAFSVV---RRC----VHKTTG---LEFAAKIINTKKLSARDFQKLER 53
Query: 198 QVYNTLGGSH-GVPRVHFKGRQGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIE 255
+ H + R+H ++ ++ +V D++ G L++ + CI
Sbjct: 54 EARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQ-- 111
Query: 256 AISILEKM---HSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDS 305
ILE + HS G VH ++KPEN LL K L D GLA + DS
Sbjct: 112 --QILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVK--LADFGLAIEVNDS 160
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 61/157 (38%), Gaps = 20/157 (12%)
Query: 269 VHGDVKPENFLLGPP---GTPDEKKLFLVDLGLATKWRDST--TGMHVEYDQRPDVFRGT 323
+H D+K N L+ G K L + D GLA +W +T + P+V R +
Sbjct: 130 IHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSAAGAYAWMAPEVIRAS 189
Query: 324 VRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCKKKMATSPDG 383
+ S+ D+ S L LL G +P++G G + V K+A
Sbjct: 190 MF------------SKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALP--- 234
Query: 384 LCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGI 420
+ CP PF + +E N P++ + I
Sbjct: 235 IPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Query: 219 GDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPEN 277
GD +VM+ L G SL DV M +A + E + LE +HS +H D+K +N
Sbjct: 89 GDELWVVMEYLAGGSLTDVVTETC--MDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDN 146
Query: 278 FLLGPPGT 285
LLG G+
Sbjct: 147 ILLGMDGS 154
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Query: 219 GDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPEN 277
GD +VM+ L G SL DV M +A + E + LE +HS +H D+K +N
Sbjct: 90 GDELWVVMEYLAGGSLTDVVTETC--MDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDN 147
Query: 278 FLLGPPGT 285
LLG G+
Sbjct: 148 ILLGMDGS 155
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 71/173 (41%), Gaps = 21/173 (12%)
Query: 138 SPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEW 197
S Y ++ +LGKG F V RR ++ TG +E A K + E
Sbjct: 5 SDNYDVKEELGKGAFSVV---RRC----VHKTTG---LEFAAKIINTKKLSARDFQKLER 54
Query: 198 QVYNTLGGSH-GVPRVHFKGRQGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIE 255
+ H + R+H ++ ++ +V D++ G L++ + CI
Sbjct: 55 EARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQ-- 112
Query: 256 AISILEKM---HSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDS 305
ILE + HS G VH ++KPEN LL K L D GLA + DS
Sbjct: 113 --QILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVK--LADFGLAIEVNDS 161
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 72/180 (40%), Gaps = 20/180 (11%)
Query: 112 SNDKANAGGEDEGSTAPLPEKIAVGGSPMYRLERKLGKGGFGQVYV-----GRRVSPV-- 164
S+D+ D P KI + Y + RKLG G F V++ G+R +
Sbjct: 4 SDDEEQEDPADYCKGGYHPVKIGDLFNGRYHVIRKLGWGHFSTVWLCWDMQGKRFVAMKV 63
Query: 165 --NANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNTLGGSHGVPRVHFKGRQGDYY 222
+A T E+ L R S + Q+ + S G G +
Sbjct: 64 VKSAQHYTETALDEIKLLKCVRESDPSDPNKDMVVQLIDDFKIS---------GMNGIHV 114
Query: 223 VMVMDMLGPSLWD-VWNNNSHTMSIEMVACIAIEAISILEKMHSKG-YVHGDVKPENFLL 280
MV ++LG L + +N + + V I + + L+ +HSK +H D+KPEN L+
Sbjct: 115 CMVFEVLGHHLLKWIIKSNYQGLPVRCVKSIIRQVLQGLDYLHSKCKIIHTDIKPENILM 174
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 92/230 (40%), Gaps = 26/230 (11%)
Query: 136 GGSPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSS--KGCNYGP 193
G S Y+ +KLG G +G+V + + ++ TG E A+K +SS N G
Sbjct: 18 GLSDRYQRVKKLGSGAYGEVLLCK-------DKLTGA---ERAIKIIKKSSVTTTSNSGA 67
Query: 194 PY-EWQVYNTLGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACI 252
E V L + + F + +YY+++ G L+D ++ A I
Sbjct: 68 LLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVD-AAVI 126
Query: 253 AIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVE 312
+ +S +H VH D+KPEN LL + + +VD GL+ H E
Sbjct: 127 MKQVLSGTTYLHKHNIVHRDLKPENLLL--ESKSRDALIKIVDFGLSA---------HFE 175
Query: 313 YDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQG 362
+ GT Y + L + + D+ S L LL G P+ G
Sbjct: 176 VGGKMKERLGTAYYIAPEV-LRKKYDEKCDVWSCGVILYILLCGYPPFGG 224
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 69/300 (23%), Positives = 125/300 (41%), Gaps = 61/300 (20%)
Query: 110 GPSND----KANAGGEDEGSTAPLPEKIAVGGSPMYRLERKLGKGGFGQVYVGRRVSPVN 165
P ND K G E E PL + VG P+ LG GGFG VY G RVS
Sbjct: 22 APCNDLHATKLAPGKEKE----PLESQYQVG--PL------LGSGGFGSVYSGIRVS--- 66
Query: 166 ANERTGPGAVEVALKFEHRSSKGCNYGP-------PYEWQVYNTLG-GSHGVPRVHFKGR 217
+ VA+K + + ++G P E + + G GV R+
Sbjct: 67 -------DNLPVAIKHVEKD-RISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFE 118
Query: 218 QGDYYVMVMDMLGP--SLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKP 275
+ D +V++++ P L+D + E+ + + + H+ G +H D+K
Sbjct: 119 RPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKD 177
Query: 276 ENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYA-----SVH 330
EN L+ + +L L+D G +D+ ++ ++D GT Y+ H
Sbjct: 178 ENILI----DLNRGELKLIDFGSGALLKDT---VYTDFD-------GTRVYSPPEWIRYH 223
Query: 331 AHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCKKKMATSPDGLCCFCPA 390
+ GR+ + + SL L ++ G +P++ + +G + ++++++ L +C A
Sbjct: 224 RYHGRSAA----VWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCLA 279
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 43/85 (50%), Gaps = 7/85 (8%)
Query: 224 MVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPP 283
+V ++G L ++ S +S E V + + + L+ +HS G +H D+KP N
Sbjct: 110 LVTTLMGADLNNIVK--SQALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNV----- 162
Query: 284 GTPDEKKLFLVDLGLATKWRDSTTG 308
++ +L ++D GLA + + TG
Sbjct: 163 AVNEDSELRILDFGLARQADEEMTG 187
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 71/173 (41%), Gaps = 21/173 (12%)
Query: 138 SPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEW 197
S Y ++ +LGKG F V RR ++ TG +E A K + E
Sbjct: 5 SDNYDVKEELGKGAFSVV---RRC----VHKTTG---LEFAAKIINTKKLSARDFQKLER 54
Query: 198 QVYNTLGGSH-GVPRVHFKGRQGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIE 255
+ H + R+H ++ ++ +V D++ G L++ + CI
Sbjct: 55 EARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQ-- 112
Query: 256 AISILEKM---HSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDS 305
ILE + HS G VH ++KPEN LL K L D GLA + DS
Sbjct: 113 --QILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVK--LADFGLAIEVNDS 161
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 124/301 (41%), Gaps = 61/301 (20%)
Query: 109 GGPSND----KANAGGEDEGSTAPLPEKIAVGGSPMYRLERKLGKGGFGQVYVGRRVSPV 164
P ND K G E E PL + VG P+ LG GGFG VY G RVS
Sbjct: 1 AAPCNDLHATKLAPGKEKE----PLESQYQVG--PL------LGSGGFGSVYSGIRVS-- 46
Query: 165 NANERTGPGAVEVALKFEHRSSKGCNYGP-------PYEWQVYNTLG-GSHGVPRVHFKG 216
+ VA+K + + ++G P E + + G GV R+
Sbjct: 47 --------DNLPVAIKHVEKD-RISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWF 97
Query: 217 RQGDYYVMVMDMLGP--SLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVK 274
+ D +V++++ P L+D + E+ + + + H+ G +H D+K
Sbjct: 98 ERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCHNCGVLHRDIK 156
Query: 275 PENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYA-----SV 329
EN L+ + +L L+D G +D+ ++ ++D GT Y+
Sbjct: 157 DENILI----DLNRGELKLIDFGSGALLKDT---VYTDFD-------GTRVYSPPEWIRY 202
Query: 330 HAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCKKKMATSPDGLCCFCP 389
H + GR+ + + SL L ++ G +P++ + +G + +++++ L +C
Sbjct: 203 HRYHGRSAA----VWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXECQHLIRWCL 258
Query: 390 A 390
A
Sbjct: 259 A 259
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 37/187 (19%), Positives = 83/187 (44%), Gaps = 17/187 (9%)
Query: 247 EMVACIAI--EAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRD 304
EM+ I I + ++ +H+K +H D+K N L ++ + + D GLAT+ +
Sbjct: 122 EMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLH-----EDLTVKIGDFGLATE-KS 175
Query: 305 STTGMHVEYDQRPDVFRGTVRYAS---VHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQ 361
+G H +++Q G++ + + + S + D+ + L L+ G+LP+
Sbjct: 176 RWSGSH-QFEQ----LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYS 230
Query: 362 GYQGENK-GFLVCKKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGI 420
++ F+V + ++ + CP ++ + + K DE P + + ++ + +
Sbjct: 231 NINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELL 290
Query: 421 VGPNPDI 427
P I
Sbjct: 291 ARSLPKI 297
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 37/187 (19%), Positives = 83/187 (44%), Gaps = 17/187 (9%)
Query: 247 EMVACIAI--EAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRD 304
EM+ I I + ++ +H+K +H D+K N L ++ + + D GLAT+ +
Sbjct: 130 EMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLH-----EDLTVKIGDFGLATE-KS 183
Query: 305 STTGMHVEYDQRPDVFRGTVRYAS---VHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQ 361
+G H +++Q G++ + + + S + D+ + L L+ G+LP+
Sbjct: 184 RWSGSH-QFEQ----LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYS 238
Query: 362 GYQGENK-GFLVCKKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGI 420
++ F+V + ++ + CP ++ + + K DE P + + ++ + +
Sbjct: 239 NINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELL 298
Query: 421 VGPNPDI 427
P I
Sbjct: 299 ARSLPKI 305
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 66/154 (42%), Gaps = 21/154 (13%)
Query: 217 RQGDYYVM--VMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSK-GYVHGDV 273
R+GD ++ + D + + T+ +++ IA+ + LE +HSK +H DV
Sbjct: 104 REGDVWICXELXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDV 163
Query: 274 KPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYAS---VH 330
KP N L+ G ++ D G++ D D D+ G Y + ++
Sbjct: 164 KPSNVLINALG-----QVKXCDFGISGYLVD---------DVAKDIDAGCKPYXAPERIN 209
Query: 331 AHLGRTG-SRRDDLESLAYTLIFLLRGRLPWQGY 363
L + G S + D+ SL T I L R P+ +
Sbjct: 210 PELNQKGYSVKSDIWSLGITXIELAILRFPYDSW 243
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 124/301 (41%), Gaps = 61/301 (20%)
Query: 109 GGPSND----KANAGGEDEGSTAPLPEKIAVGGSPMYRLERKLGKGGFGQVYVGRRVSPV 164
P ND K G E E PL + VG P+ LG GGFG VY G RVS
Sbjct: 2 AAPCNDLHATKLAPGKEKE----PLESQYQVG--PL------LGSGGFGSVYSGIRVS-- 47
Query: 165 NANERTGPGAVEVALKFEHRSSKGCNYGP-------PYEWQVYNTLG-GSHGVPRVHFKG 216
+ VA+K + + ++G P E + + G GV R+
Sbjct: 48 --------DNLPVAIKHVEKD-RISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWF 98
Query: 217 RQGDYYVMVMDMLGP--SLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVK 274
+ D +V++++ P L+D + E+ + + + H+ G +H D+K
Sbjct: 99 ERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCHNCGVLHRDIK 157
Query: 275 PENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYA-----SV 329
EN L+ + +L L+D G +D+ ++ ++D GT Y+
Sbjct: 158 DENILI----DLNRGELKLIDFGSGALLKDT---VYTDFD-------GTRVYSPPEWIRY 203
Query: 330 HAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCKKKMATSPDGLCCFCP 389
H + GR+ + + SL L ++ G +P++ + +G + +++++ L +C
Sbjct: 204 HRYHGRSAA----VWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXECQHLIRWCL 259
Query: 390 A 390
A
Sbjct: 260 A 260
>pdb|3E7E|A Chain A, Structure And Substrate Recruitment Of The Human Spindle
Checkpoint Kinase Bub
Length = 365
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 26/44 (59%)
Query: 238 NNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLG 281
N M +V A+ + ++E++H +HGD+KP+NF+LG
Sbjct: 163 NTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILG 206
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 124/301 (41%), Gaps = 61/301 (20%)
Query: 109 GGPSND----KANAGGEDEGSTAPLPEKIAVGGSPMYRLERKLGKGGFGQVYVGRRVSPV 164
P ND K G E E PL + VG P+ LG GGFG VY G RVS
Sbjct: 2 AAPCNDLHATKLAPGKEKE----PLESQYQVG--PL------LGSGGFGSVYSGIRVS-- 47
Query: 165 NANERTGPGAVEVALKFEHRSSKGCNYGP-------PYEWQVYNTLG-GSHGVPRVHFKG 216
+ VA+K + + ++G P E + + G GV R+
Sbjct: 48 --------DNLPVAIKHVEKD-RISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWF 98
Query: 217 RQGDYYVMVMDMLGP--SLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVK 274
+ D +V++++ P L+D + E+ + + + H+ G +H D+K
Sbjct: 99 ERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCHNCGVLHRDIK 157
Query: 275 PENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYA-----SV 329
EN L+ + +L L+D G +D+ ++ ++D GT Y+
Sbjct: 158 DENILI----DLNRGELKLIDFGSGALLKDT---VYTDFD-------GTRVYSPPEWIRY 203
Query: 330 HAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCKKKMATSPDGLCCFCP 389
H + GR+ + + SL L ++ G +P++ + +G + +++++ L +C
Sbjct: 204 HRYHGRSAA----VWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXECQHLIRWCL 259
Query: 390 A 390
A
Sbjct: 260 A 260
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 63/153 (41%), Gaps = 17/153 (11%)
Query: 249 VACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTG 308
+A + E + L+ +HS+ +H D+K N LL G D K L D G+A + D+
Sbjct: 122 IATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQG--DVK---LADFGVAGQLTDTQI- 175
Query: 309 MHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENK 368
+ + F GT + + + D+ SL T I L +G P
Sbjct: 176 -------KRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRV 228
Query: 369 GFLVCKKKMATSPDGLCCFCPAPFRQFVEYVVN 401
FL+ K +P L F++F++ +N
Sbjct: 229 LFLIPK----NNPPTLVGDFTKSFKEFIDACLN 257
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 91/225 (40%), Gaps = 28/225 (12%)
Query: 141 YRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPY--EWQ 198
YRL++ +GKG F +V + R V TG EVA+K ++ E +
Sbjct: 17 YRLQKTIGKGNFAKVKLARHVL-------TGR---EVAVKIIDKTQLNPTSLQKLFREVR 66
Query: 199 VYNTLGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAIS 258
+ L + V + Y+++ G ++D + E A + +S
Sbjct: 67 IMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVS 125
Query: 259 ILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYDQRPD 318
++ H K VH D+K EN LL + + + D G + ++ T G + D
Sbjct: 126 AVQYCHQKYIVHRDLKAENLLLD-----GDMNIKIADFGFSNEF---TVG------NKLD 171
Query: 319 VFRGTVRYASVHAHLGRTGSRRD-DLESLAYTLIFLLRGRLPWQG 362
F G+ YA+ G+ + D+ SL L L+ G LP+ G
Sbjct: 172 TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG 216
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 99/260 (38%), Gaps = 29/260 (11%)
Query: 108 SGGPSNDKANAGGEDEGSTAPLPEKIAVGGSPM----YRLERKLGKGGFGQVYVGRRVSP 163
S + A + +APL E V P Y R LGKGGF + Y ++
Sbjct: 7 SAAIAKPSAKPSAHVDPKSAPLKEIPDVLVDPRTMKRYMRGRFLGKGGFAKCY---EITD 63
Query: 164 VNANERTGPGAVEVALKFE-HRSSKGCNYGPPYEWQVYNTLGGSHGVPRVHFKGRQGDYY 222
++ E V ++ + H+ K E ++ +L H V F Y
Sbjct: 64 MDTKEVFAGKVVPKSMLLKPHQKEKMST-----EIAIHKSLDNPHVVGFHGFFEDDDFVY 118
Query: 223 VMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGP 282
V++ SL ++ E + + I ++ +H+ +H D+K N L
Sbjct: 119 VVLEICRRRSLLELHKRRKAVTEPEARYFMR-QTIQGVQYLHNNRVIHRDLKLGNLFLN- 176
Query: 283 PGTPDEKKLFLVDLGLATKWRDSTTGMHVEYD-QRPDVFRGTVRYASVHAHLGRTGSRRD 341
D+ + + D GLATK +E+D +R GT Y + + S
Sbjct: 177 ----DDMDVKIGDFGLATK---------IEFDGERKKTLCGTPNYIAPEVLCKKGHSFEV 223
Query: 342 DLESLAYTLIFLLRGRLPWQ 361
D+ SL L LL G+ P++
Sbjct: 224 DIWSLGCILYTLLVGKPPFE 243
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 37/193 (19%), Positives = 84/193 (43%), Gaps = 21/193 (10%)
Query: 230 GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEK 289
G SL+ + + ++ + IA + ++ +H+K +H D+K N L T
Sbjct: 91 GSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNT---- 146
Query: 290 KLFLVDLGLAT---KWRDSTTGMHVEYDQRPDVFRGTVRYAS---VHAHLGRTGSRRDDL 343
+ + D GLAT +W +G H +++Q G++ + + + S + D+
Sbjct: 147 -VKIGDFGLATVKSRW----SGSH-QFEQ----LSGSILWMAPEVIRMQDSNPYSFQSDV 196
Query: 344 ESLAYTLIFLLRGRLPWQGYQGENKGF-LVCKKKMATSPDGLCCFCPAPFRQFVEYVVNL 402
+ L L+ G+LP+ ++ +V + ++ + CP ++ + +
Sbjct: 197 YAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKK 256
Query: 403 KFDEEPNYAKYIS 415
K DE P++ + ++
Sbjct: 257 KRDERPSFPRILA 269
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 38.1 bits (87), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 54/116 (46%), Gaps = 15/116 (12%)
Query: 255 EAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYD 314
+ +S LE +H + ++ D+KPEN LL D+ + + DLGLA + + T
Sbjct: 297 QIVSGLEHLHQRNIIYRDLKPENVLLD-----DDGNVRISDLGLAVELKAGQT------- 344
Query: 315 QRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPW--QGYQGENK 368
+ + GT + + LG D +L TL ++ R P+ +G + ENK
Sbjct: 345 -KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENK 399
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 38.1 bits (87), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 73/170 (42%), Gaps = 16/170 (9%)
Query: 136 GGSPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSS--KGCNYGP 193
G S Y+ +KLG G +G+V + + ++ TG E A+K +SS N G
Sbjct: 1 GLSDRYQRVKKLGSGAYGEVLLCK-------DKLTGA---ERAIKIIKKSSVTTTSNSGA 50
Query: 194 PY-EWQVYNTLGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACI 252
E V L + + F + +YY+++ G L+D ++ A I
Sbjct: 51 LLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVD-AAVI 109
Query: 253 AIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKW 302
+ +S +H VH D+KPEN LL + + +VD GL+ +
Sbjct: 110 MKQVLSGTTYLHKHNIVHRDLKPENLLLESKSR--DALIKIVDFGLSAHF 157
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 38.1 bits (87), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 43/86 (50%), Gaps = 16/86 (18%)
Query: 221 YYVMVMDML-GPSLWD------VWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDV 273
+Y +VM ++ G L+D V+ ++ I+ V +S ++ +H G VH D+
Sbjct: 80 HYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQV-------LSAVKYLHENGIVHRDL 132
Query: 274 KPENFLLGPPGTPDEKKLFLVDLGLA 299
KPEN L P + K+ + D GL+
Sbjct: 133 KPENLLYLTP--EENSKIMITDFGLS 156
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 54/116 (46%), Gaps = 15/116 (12%)
Query: 255 EAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYD 314
+ +S LE +H + ++ D+KPEN LL D+ + + DLGLA + + T
Sbjct: 297 QIVSGLEHLHQRNIIYRDLKPENVLLD-----DDGNVRISDLGLAVELKAGQT------- 344
Query: 315 QRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPW--QGYQGENK 368
+ + GT + + LG D +L TL ++ R P+ +G + ENK
Sbjct: 345 -KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENK 399
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 90/225 (40%), Gaps = 28/225 (12%)
Query: 141 YRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPY--EWQ 198
YRL + +GKG F +V + R + TG EVA+K ++ + E +
Sbjct: 16 YRLLKTIGKGNFAKVKLARHIL-------TGK---EVAVKIIDKTQLNSSSLQKLFREVR 65
Query: 199 VYNTLGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAIS 258
+ L + V + Y+++ G ++D + E A + +S
Sbjct: 66 IMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVS 124
Query: 259 ILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYDQRPD 318
++ H K VH D+K EN LL + + + D G + ++ + + D
Sbjct: 125 AVQYCHQKFIVHRDLKAENLLLDA-----DMNIKIADFGFSNEF---------TFGNKLD 170
Query: 319 VFRGTVRYASVHAHLGRTGSRRD-DLESLAYTLIFLLRGRLPWQG 362
F G+ YA+ G+ + D+ SL L L+ G LP+ G
Sbjct: 171 TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG 215
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 70/185 (37%), Gaps = 34/185 (18%)
Query: 138 SPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEW 197
S Y + LG+G FG+V V ++ G VA+K + C E
Sbjct: 13 SARYEIVDTLGEGAFGKV-----VECIDHK----AGGRHVAVKIVKNVDRYCE-AARSEI 62
Query: 198 QVYNTLGGSHGVPRVHFKGRQ-------GDYYVMVMDMLGPSLWDVWNNNSHT-MSIEMV 249
QV L + P F+ Q + +V ++LG S +D N ++ +
Sbjct: 63 QVLEHLNTTD--PNSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHI 120
Query: 250 ACIAIEAISILEKMHSKGYVHGDVKPENFLL---------GPPGTPDEKKLF-----LVD 295
+A + + +HS H D+KPEN L P DE+ L +VD
Sbjct: 121 RKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVD 180
Query: 296 LGLAT 300
G AT
Sbjct: 181 FGSAT 185
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 54/116 (46%), Gaps = 15/116 (12%)
Query: 255 EAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYD 314
+ +S LE +H + ++ D+KPEN LL D+ + + DLGLA + + T
Sbjct: 297 QIVSGLEHLHQRNIIYRDLKPENVLLD-----DDGNVRISDLGLAVELKAGQT------- 344
Query: 315 QRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPW--QGYQGENK 368
+ + GT + + LG D +L TL ++ R P+ +G + ENK
Sbjct: 345 -KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENK 399
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 54/116 (46%), Gaps = 15/116 (12%)
Query: 255 EAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYD 314
+ +S LE +H + ++ D+KPEN LL D+ + + DLGLA + + T
Sbjct: 297 QIVSGLEHLHQRNIIYRDLKPENVLLD-----DDGNVRISDLGLAVELKAGQT------- 344
Query: 315 QRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPW--QGYQGENK 368
+ + GT + + LG D +L TL ++ R P+ +G + ENK
Sbjct: 345 -KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENK 399
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 70/185 (37%), Gaps = 34/185 (18%)
Query: 138 SPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEW 197
S Y + LG+G FG+V V ++ G VA+K + C E
Sbjct: 13 SARYEIVDTLGEGAFGKV-----VECIDHK----AGGRHVAVKIVKNVDRYCE-AARSEI 62
Query: 198 QVYNTLGGSHGVPRVHFKGRQ-------GDYYVMVMDMLGPSLWDVWNNNSHT-MSIEMV 249
QV L + P F+ Q + +V ++LG S +D N ++ +
Sbjct: 63 QVLEHLNTTD--PNSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHI 120
Query: 250 ACIAIEAISILEKMHSKGYVHGDVKPENFLL---------GPPGTPDEKKLF-----LVD 295
+A + + +HS H D+KPEN L P DE+ L +VD
Sbjct: 121 RKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVD 180
Query: 296 LGLAT 300
G AT
Sbjct: 181 FGSAT 185
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 54/120 (45%), Gaps = 22/120 (18%)
Query: 253 AIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRD----STTG 308
A E I LE MH++ V+ D+KP N LL G + + DLGLA + ++ G
Sbjct: 298 AAEIILGLEHMHNRFVVYRDLKPANILLDEHG-----HVRISDLGLACDFSKKKPHASVG 352
Query: 309 MHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENK 368
H P+V + V Y S D SL L LLRG P++ ++ ++K
Sbjct: 353 THGY--MAPEVLQKGVAYDS-----------SADWFSLGCMLFKLLRGHSPFRQHKTKDK 399
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 58/265 (21%), Positives = 113/265 (42%), Gaps = 45/265 (16%)
Query: 141 YRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGP------- 193
Y++ LG GGFG VY G RVS + VA+K + + ++G
Sbjct: 33 YQVGPLLGSGGFGSVYSGIRVS----------DNLPVAIKHVEKD-RISDWGELPNGTRV 81
Query: 194 PYEWQVYNTLG-GSHGVPRVHFKGRQGDYYVMVMDMLGP--SLWDVWNNNSHTMSIEMVA 250
P E + + G GV R+ + D +V++++ P L+D + E+
Sbjct: 82 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELAR 140
Query: 251 CIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMH 310
+ + + H+ G +H D+K EN L+ + +L L+D G +D+ ++
Sbjct: 141 SFFWQVLEAVRHCHNCGVLHRDIKDENILI----DLNRGELKLIDFGSGALLKDT---VY 193
Query: 311 VEYDQRPDVFRGTVRYA-----SVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQG 365
++D GT Y+ H + GR+ + + SL L ++ G +P++ +
Sbjct: 194 TDFD-------GTRVYSPPEWIRYHRYHGRSAA----VWSLGILLYDMVCGDIPFEHDEE 242
Query: 366 ENKGFLVCKKKMATSPDGLCCFCPA 390
+G + +++++ L +C A
Sbjct: 243 IIRGQVFFRQRVSXECQHLIRWCLA 267
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 124/301 (41%), Gaps = 61/301 (20%)
Query: 109 GGPSND----KANAGGEDEGSTAPLPEKIAVGGSPMYRLERKLGKGGFGQVYVGRRVSPV 164
P ND K G E E PL + VG P+ LG GGFG VY G RVS
Sbjct: 29 AAPCNDLHATKLAPGKEKE----PLESQYQVG--PL------LGSGGFGSVYSGIRVS-- 74
Query: 165 NANERTGPGAVEVALKFEHRSSKGCNYGP-------PYEWQVYNTLG-GSHGVPRVHFKG 216
+ VA+K + + ++G P E + + G GV R+
Sbjct: 75 --------DNLPVAIKHVEKD-RISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWF 125
Query: 217 RQGDYYVMVMDMLGP--SLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVK 274
+ D +V++++ P L+D + E+ + + + H+ G +H D+K
Sbjct: 126 ERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCHNCGVLHRDIK 184
Query: 275 PENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYA-----SV 329
EN L+ + +L L+D G +D+ ++ ++D GT Y+
Sbjct: 185 DENILI----DLNRGELKLIDFGSGALLKDT---VYTDFD-------GTRVYSPPEWIRY 230
Query: 330 HAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCKKKMATSPDGLCCFCP 389
H + GR+ + + SL L ++ G +P++ + +G + +++++ L +C
Sbjct: 231 HRYHGRSAA----VWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXECQHLIRWCL 286
Query: 390 A 390
A
Sbjct: 287 A 287
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 54/120 (45%), Gaps = 22/120 (18%)
Query: 253 AIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRD----STTG 308
A E I LE MH++ V+ D+KP N LL G + + DLGLA + ++ G
Sbjct: 297 AAEIILGLEHMHNRFVVYRDLKPANILLDEHG-----HVRISDLGLACDFSKKKPHASVG 351
Query: 309 MHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENK 368
H P+V + V Y S D SL L LLRG P++ ++ ++K
Sbjct: 352 THGY--MAPEVLQKGVAYDS-----------SADWFSLGCMLFKLLRGHSPFRQHKTKDK 398
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 54/120 (45%), Gaps = 22/120 (18%)
Query: 253 AIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRD----STTG 308
A E I LE MH++ V+ D+KP N LL G + + DLGLA + ++ G
Sbjct: 298 AAEIILGLEHMHNRFVVYRDLKPANILLDEHG-----HVRISDLGLACDFSKKKPHASVG 352
Query: 309 MHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENK 368
H P+V + V Y S D SL L LLRG P++ ++ ++K
Sbjct: 353 THGY--MAPEVLQKGVAYDS-----------SADWFSLGCMLFKLLRGHSPFRQHKTKDK 399
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 54/120 (45%), Gaps = 22/120 (18%)
Query: 253 AIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRD----STTG 308
A E I LE MH++ V+ D+KP N LL G + + DLGLA + ++ G
Sbjct: 298 AAEIILGLEHMHNRFVVYRDLKPANILLDEHG-----HVRISDLGLACDFSKKKPHASVG 352
Query: 309 MHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENK 368
H P+V + V Y S D SL L LLRG P++ ++ ++K
Sbjct: 353 THGY--MAPEVLQKGVAYDS-----------SADWFSLGCMLFKLLRGHSPFRQHKTKDK 399
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 99/260 (38%), Gaps = 29/260 (11%)
Query: 108 SGGPSNDKANAGGEDEGSTAPLPEKIAVGGSPM----YRLERKLGKGGFGQVYVGRRVSP 163
S + A + +APL E V P Y R LGKGGF + Y ++
Sbjct: 7 SAAIAKPSAKPSAHVDPKSAPLKEIPDVLVDPRTMKRYMRGRFLGKGGFAKCY---EITD 63
Query: 164 VNANERTGPGAVEVALKFE-HRSSKGCNYGPPYEWQVYNTLGGSHGVPRVHFKGRQGDYY 222
++ E V ++ + H+ K E ++ +L H V F Y
Sbjct: 64 MDTKEVFAGKVVPKSMLLKPHQKEKMST-----EIAIHKSLDNPHVVGFHGFFEDDDFVY 118
Query: 223 VMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGP 282
V++ SL ++ E + + I ++ +H+ +H D+K N L
Sbjct: 119 VVLEICRRRSLLELHKRRKAVTEPEARYFMR-QTIQGVQYLHNNRVIHRDLKLGNLFLN- 176
Query: 283 PGTPDEKKLFLVDLGLATKWRDSTTGMHVEYD-QRPDVFRGTVRYASVHAHLGRTGSRRD 341
D+ + + D GLATK +E+D +R GT Y + + S
Sbjct: 177 ----DDMDVKIGDFGLATK---------IEFDGERKKXLCGTPNYIAPEVLCKKGHSFEV 223
Query: 342 DLESLAYTLIFLLRGRLPWQ 361
D+ SL L LL G+ P++
Sbjct: 224 DIWSLGCILYTLLVGKPPFE 243
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 90/225 (40%), Gaps = 28/225 (12%)
Query: 141 YRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPY--EWQ 198
YRL + +GKG F +V + R + TG EVA+K ++ + E +
Sbjct: 16 YRLLKTIGKGNFAKVKLARHIL-------TGK---EVAVKIIDKTQLNSSSLQKLFREVR 65
Query: 199 VYNTLGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAIS 258
+ L + V + Y+++ G ++D + E A + +S
Sbjct: 66 IMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVS 124
Query: 259 ILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYDQRPD 318
++ H K VH D+K EN LL + + + D G + ++ + + D
Sbjct: 125 AVQYCHQKFIVHRDLKAENLLLDA-----DMNIKIADFGFSNEF---------TFGNKLD 170
Query: 319 VFRGTVRYASVHAHLGRTGSRRD-DLESLAYTLIFLLRGRLPWQG 362
F G+ YA+ G+ + D+ SL L L+ G LP+ G
Sbjct: 171 TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG 215
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 37.7 bits (86), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 124/301 (41%), Gaps = 61/301 (20%)
Query: 109 GGPSND----KANAGGEDEGSTAPLPEKIAVGGSPMYRLERKLGKGGFGQVYVGRRVSPV 164
P ND K G E E PL + VG P+ LG GGFG VY G RVS
Sbjct: 34 AAPCNDLHATKLAPGKEKE----PLESQYQVG--PL------LGSGGFGSVYSGIRVS-- 79
Query: 165 NANERTGPGAVEVALKFEHRSSKGCNYGP-------PYEWQVYNTLG-GSHGVPRVHFKG 216
+ VA+K + + ++G P E + + G GV R+
Sbjct: 80 --------DNLPVAIKHVEKD-RISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWF 130
Query: 217 RQGDYYVMVMDMLGP--SLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVK 274
+ D +V++++ P L+D + E+ + + + H+ G +H D+K
Sbjct: 131 ERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCHNCGVLHRDIK 189
Query: 275 PENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYA-----SV 329
EN L+ + +L L+D G +D+ ++ ++D GT Y+
Sbjct: 190 DENILI----DLNRGELKLIDFGSGALLKDT---VYTDFD-------GTRVYSPPEWIRY 235
Query: 330 HAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCKKKMATSPDGLCCFCP 389
H + GR+ + + SL L ++ G +P++ + +G + +++++ L +C
Sbjct: 236 HRYHGRSAA----VWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXECQHLIRWCL 291
Query: 390 A 390
A
Sbjct: 292 A 292
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 37.4 bits (85), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 27/45 (60%), Gaps = 4/45 (8%)
Query: 255 EAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLA 299
E + L+ HSKG +H DVKP N ++ +KKL L+D GLA
Sbjct: 140 ELLKALDYCHSKGIMHRDVKPHNVMID----HQQKKLRLIDWGLA 180
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 38/190 (20%), Positives = 83/190 (43%), Gaps = 23/190 (12%)
Query: 247 EMVACIAI--EAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLAT---K 301
EM+ I I + ++ +H+K +H D+K N L ++ + + D GLAT +
Sbjct: 130 EMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLH-----EDLTVKIGDFGLATVKSR 184
Query: 302 WRDSTTGMHVEYDQRPDVFRGTVRYAS---VHAHLGRTGSRRDDLESLAYTLIFLLRGRL 358
W +G H +++Q G++ + + + S + D+ + L L+ G+L
Sbjct: 185 W----SGSH-QFEQ----LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQL 235
Query: 359 PWQGYQGENK-GFLVCKKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLF 417
P+ ++ F+V + ++ + CP ++ + + K DE P + + ++
Sbjct: 236 PYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASI 295
Query: 418 DGIVGPNPDI 427
+ + P I
Sbjct: 296 ELLARSLPKI 305
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 38/64 (59%), Gaps = 5/64 (7%)
Query: 219 GDYYVMVMDML-GPSLWDVWNNNSHT-MSIEMVACIAIEAISILEKMHSKGYVHGDVKPE 276
GD +VM+ L G +L D+ +HT M+ E +A + + + L +H++G +H D+K +
Sbjct: 220 GDELWVVMEFLEGGALTDIV---THTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSD 276
Query: 277 NFLL 280
+ LL
Sbjct: 277 SILL 280
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 37.4 bits (85), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 27/45 (60%), Gaps = 4/45 (8%)
Query: 255 EAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLA 299
E + L+ HSKG +H DVKP N ++ +KKL L+D GLA
Sbjct: 145 ELLKALDYCHSKGIMHRDVKPHNVMID----HQQKKLRLIDWGLA 185
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 37.4 bits (85), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 67/163 (41%), Gaps = 13/163 (7%)
Query: 140 MYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQV 199
MY+L +LGKG F V RR V A + + K R + E ++
Sbjct: 23 MYQLFEELGKGAFSVV---RRCVKVLAGQEYAAKIINTK-KLSARDHQKLER----EARI 74
Query: 200 YNTLGGSHGVPRVHFKGRQGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAIS 258
L + V R+H + ++ ++ D++ G L++ + + CI + +
Sbjct: 75 CRLLKHPNIV-RLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQ-QILE 132
Query: 259 ILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATK 301
+ H G VH D+KPEN LL K L D GLA +
Sbjct: 133 AVLHCHQMGVVHRDLKPENLLLASKLKGAAVK--LADFGLAIE 173
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 37.4 bits (85), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 38/190 (20%), Positives = 83/190 (43%), Gaps = 23/190 (12%)
Query: 247 EMVACIAI--EAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLAT---K 301
EM+ I I + ++ +H+K +H D+K N L ++ + + D GLAT +
Sbjct: 129 EMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLH-----EDLTVKIGDFGLATVKSR 183
Query: 302 WRDSTTGMHVEYDQRPDVFRGTVRYAS---VHAHLGRTGSRRDDLESLAYTLIFLLRGRL 358
W +G H +++Q G++ + + + S + D+ + L L+ G+L
Sbjct: 184 W----SGSH-QFEQ----LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQL 234
Query: 359 PWQGYQGENK-GFLVCKKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLF 417
P+ ++ F+V + ++ + CP ++ + + K DE P + + ++
Sbjct: 235 PYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASI 294
Query: 418 DGIVGPNPDI 427
+ + P I
Sbjct: 295 ELLARSLPKI 304
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 37.4 bits (85), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 29/48 (60%), Gaps = 6/48 (12%)
Query: 254 IEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATK 301
+E + L +HS G V+ D+KPEN +L E++L L+DLG ++
Sbjct: 189 LEILPALSYLHSIGLVYNDLKPENIML------TEEQLKLIDLGAVSR 230
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 37.4 bits (85), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 89/225 (39%), Gaps = 28/225 (12%)
Query: 141 YRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPY--EWQ 198
YRL + +GKG F +V + R + TG EVA+K ++ + E +
Sbjct: 16 YRLLKTIGKGNFAKVKLARHIL-------TGK---EVAVKIIDKTQLNSSSLQKLFREVR 65
Query: 199 VYNTLGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAIS 258
+ L + V + Y+++ G ++D + E A + +S
Sbjct: 66 IMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVS 124
Query: 259 ILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYDQRPD 318
++ H K VH D+K EN LL + + + D G + ++ + + D
Sbjct: 125 AVQYCHQKFIVHRDLKAENLLLDA-----DMNIKIADFGFSNEF---------TFGNKLD 170
Query: 319 VFRGTVRYASVHAHLGRTGSRRD-DLESLAYTLIFLLRGRLPWQG 362
F G YA+ G+ + D+ SL L L+ G LP+ G
Sbjct: 171 AFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG 215
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 37.4 bits (85), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 85/223 (38%), Gaps = 41/223 (18%)
Query: 147 LGKGGFGQVYVGRR--------VSPVNANERTGPGAVEVALKFEHRSS---KGCNYGPPY 195
+G GGFGQV+ + + V N V+ K +H + GC G Y
Sbjct: 19 IGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAEREVKALAKLDHVNIVHYNGCWDGFDY 78
Query: 196 EWQVYNTLGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIE 255
+ + ++ S + F + M+ + W ++ V +A+E
Sbjct: 79 DPET-SSKNSSRSKTKCLF---------IQMEFCDKGTLEQWIEKRRGEKLDKV--LALE 126
Query: 256 AISILEK----MHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHV 311
+ K +HSK ++ D+KP N L D K++ + D GL T ++
Sbjct: 127 LFEQITKGVDYIHSKKLINRDLKPSNIFL-----VDTKQVKIGDFGLVTSLKN------- 174
Query: 312 EYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLL 354
D + +GT+RY S + + DL +L L LL
Sbjct: 175 --DGKRXRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 46/110 (41%), Gaps = 23/110 (20%)
Query: 263 MHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYDQRPDVFRG 322
+H G VH D+KP NFL+ + L L+D G+A + + + D G
Sbjct: 143 IHQHGIVHSDLKPANFLIV------DGMLKLIDFGIANQMQPDXXXV------VKDSQVG 190
Query: 323 TVRYASVHAHLGRTGSRRD-----------DLESLAYTLIFLLRGRLPWQ 361
TV Y A + SR + D+ SL L ++ G+ P+Q
Sbjct: 191 TVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ 240
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 5/57 (8%)
Query: 254 IEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMH 310
++ S LE MHS+ +H D+KP N + G + L DLGL + TT H
Sbjct: 143 VQLCSALEHMHSRRVMHRDIKPANVFITATGV-----VKLGDLGLGRFFSSKTTAAH 194
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 37.0 bits (84), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 38/190 (20%), Positives = 83/190 (43%), Gaps = 23/190 (12%)
Query: 247 EMVACIAI--EAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLAT---K 301
EM+ I I + ++ +H+K +H D+K N L ++ + + D GLAT +
Sbjct: 104 EMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLH-----EDLTVKIGDFGLATVKSR 158
Query: 302 WRDSTTGMHVEYDQRPDVFRGTVRYAS---VHAHLGRTGSRRDDLESLAYTLIFLLRGRL 358
W +G H +++Q G++ + + + S + D+ + L L+ G+L
Sbjct: 159 W----SGSH-QFEQ----LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQL 209
Query: 359 PWQGYQGENK-GFLVCKKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLF 417
P+ ++ F+V + ++ + CP ++ + + K DE P + + ++
Sbjct: 210 PYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASI 269
Query: 418 DGIVGPNPDI 427
+ + P I
Sbjct: 270 ELLARSLPKI 279
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 37.0 bits (84), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 38/190 (20%), Positives = 83/190 (43%), Gaps = 23/190 (12%)
Query: 247 EMVACIAI--EAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLAT---K 301
EM+ I I + ++ +H+K +H D+K N L ++ + + D GLAT +
Sbjct: 107 EMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLH-----EDLTVKIGDFGLATVKSR 161
Query: 302 WRDSTTGMHVEYDQRPDVFRGTVRYAS---VHAHLGRTGSRRDDLESLAYTLIFLLRGRL 358
W +G H +++Q G++ + + + S + D+ + L L+ G+L
Sbjct: 162 W----SGSH-QFEQ----LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQL 212
Query: 359 PWQGYQGENK-GFLVCKKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLF 417
P+ ++ F+V + ++ + CP ++ + + K DE P + + ++
Sbjct: 213 PYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASI 272
Query: 418 DGIVGPNPDI 427
+ + P I
Sbjct: 273 ELLARSLPKI 282
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 37.0 bits (84), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 99/260 (38%), Gaps = 29/260 (11%)
Query: 108 SGGPSNDKANAGGEDEGSTAPLPEKIAVGGSPM----YRLERKLGKGGFGQVYVGRRVSP 163
S + A + +APL E V P Y R LGKGGF + Y ++
Sbjct: 7 SAAIAKPSAKPSAHVDPKSAPLKEIPDVLVDPRTMKRYMRGRFLGKGGFAKCY---EITD 63
Query: 164 VNANERTGPGAVEVALKFE-HRSSKGCNYGPPYEWQVYNTLGGSHGVPRVHFKGRQGDYY 222
++ E V ++ + H+ K E ++ +L H V F Y
Sbjct: 64 MDTKEVFAGKVVPKSMLLKPHQKEKMST-----EIAIHKSLDNPHVVGFHGFFEDDDFVY 118
Query: 223 VMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGP 282
V++ SL ++ E + + I ++ +H+ +H D+K N L
Sbjct: 119 VVLEICRRRSLLELHKRRKAVTEPEARYFMR-QTIQGVQYLHNNRVIHRDLKLGNLFLN- 176
Query: 283 PGTPDEKKLFLVDLGLATKWRDSTTGMHVEYD-QRPDVFRGTVRYASVHAHLGRTGSRRD 341
D+ + + D GLATK +E+D +R GT Y + + S
Sbjct: 177 ----DDMDVKIGDFGLATK---------IEFDGERKKDLCGTPNYIAPEVLCKKGHSFEV 223
Query: 342 DLESLAYTLIFLLRGRLPWQ 361
D+ SL L LL G+ P++
Sbjct: 224 DIWSLGCILYTLLVGKPPFE 243
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 37.0 bits (84), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 38/64 (59%), Gaps = 5/64 (7%)
Query: 219 GDYYVMVMDML-GPSLWDVWNNNSHT-MSIEMVACIAIEAISILEKMHSKGYVHGDVKPE 276
GD +VM+ L G +L D+ +HT M+ E +A + + + L +H++G +H D+K +
Sbjct: 143 GDELWVVMEFLEGGALTDIV---THTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSD 199
Query: 277 NFLL 280
+ LL
Sbjct: 200 SILL 203
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 36.6 bits (83), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 38/64 (59%), Gaps = 5/64 (7%)
Query: 219 GDYYVMVMDML-GPSLWDVWNNNSHT-MSIEMVACIAIEAISILEKMHSKGYVHGDVKPE 276
GD +VM+ L G +L D+ +HT M+ E +A + + + L +H++G +H D+K +
Sbjct: 100 GDELWVVMEFLEGGALTDIV---THTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSD 156
Query: 277 NFLL 280
+ LL
Sbjct: 157 SILL 160
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 36.6 bits (83), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 35/175 (20%), Positives = 79/175 (45%), Gaps = 17/175 (9%)
Query: 247 EMVACIAI--EAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRD 304
EM+ I I + ++ +H+K +H D+K N L ++ + + D GLAT+ +
Sbjct: 102 EMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLH-----EDLTVKIGDFGLATE-KS 155
Query: 305 STTGMHVEYDQRPDVFRGTVRYAS---VHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQ 361
+G H +++Q G++ + + + S + D+ + L L+ G+LP+
Sbjct: 156 RWSGSH-QFEQ----LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYS 210
Query: 362 GYQGENK-GFLVCKKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYIS 415
++ F+V + ++ + CP ++ + + K DE P + + ++
Sbjct: 211 NINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILA 265
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 36.6 bits (83), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 90/225 (40%), Gaps = 28/225 (12%)
Query: 141 YRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPY--EWQ 198
YRL + +GKG F +V + R + TG EVA++ ++ + E +
Sbjct: 16 YRLLKTIGKGNFAKVKLARHIL-------TGK---EVAVRIIDKTQLNSSSLQKLFREVR 65
Query: 199 VYNTLGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAIS 258
+ L + V + Y+++ G ++D + E A + +S
Sbjct: 66 IMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVS 124
Query: 259 ILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYDQRPD 318
++ H K VH D+K EN LL + + + D G + ++ + + D
Sbjct: 125 AVQYCHQKFIVHRDLKAENLLLDA-----DMNIKIADFGFSNEF---------TFGNKLD 170
Query: 319 VFRGTVRYASVHAHLGRTGSRRD-DLESLAYTLIFLLRGRLPWQG 362
F G+ YA+ G+ + D+ SL L L+ G LP+ G
Sbjct: 171 TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG 215
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 36.6 bits (83), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 42/85 (49%), Gaps = 7/85 (8%)
Query: 224 MVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPP 283
+V ++G L ++ +S E V + + + L+ +HS G +H D+KP N
Sbjct: 110 LVTTLMGADLNNIVK--CQALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNV----- 162
Query: 284 GTPDEKKLFLVDLGLATKWRDSTTG 308
++ +L ++D GLA + + TG
Sbjct: 163 AVNEDSELRILDFGLARQADEEMTG 187
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 36.6 bits (83), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Query: 219 GDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPEN 277
GD +VM+ L G SL DV M +A + E + LE +HS +H ++K +N
Sbjct: 90 GDELWVVMEYLAGGSLTDVVTETC--MDEGQIAAVCRECLQALEFLHSNQVIHRNIKSDN 147
Query: 278 FLLGPPGT 285
LLG G+
Sbjct: 148 ILLGMDGS 155
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 36.6 bits (83), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 74/191 (38%), Gaps = 28/191 (14%)
Query: 141 YRLERKLGKGGFGQVYV----GRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYE 196
Y LE +G+G +G+V + G R+ A ++ VE +F+ + P
Sbjct: 28 YTLENTIGRGSWGEVKIAVQKGTRIR--RAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNI 85
Query: 197 WQVYNTLGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEA 256
++Y T F+ Y VM + G V + S A I +
Sbjct: 86 IRLYET-----------FEDNTDIYLVMELCTGGELFERVVHKRVFRESD--AARIMKDV 132
Query: 257 ISILEKMHSKGYVHGDVKPENFLL--GPPGTPDEKKLFLVDLGLATKWRDST---TGMHV 311
+S + H H D+KPENFL P +P L L+D GLA +++ T +
Sbjct: 133 LSAVAYCHKLNVAHRDLKPENFLFLTDSPDSP----LKLIDFGLAARFKPGKMMRTKVGT 188
Query: 312 EYDQRPDVFRG 322
Y P V G
Sbjct: 189 PYYVSPQVLEG 199
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 36.6 bits (83), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 38/64 (59%), Gaps = 5/64 (7%)
Query: 219 GDYYVMVMDML-GPSLWDVWNNNSHT-MSIEMVACIAIEAISILEKMHSKGYVHGDVKPE 276
GD +VM+ L G +L D+ +HT M+ E +A + + + L +H++G +H D+K +
Sbjct: 98 GDELWVVMEFLEGGALTDIV---THTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSD 154
Query: 277 NFLL 280
+ LL
Sbjct: 155 SILL 158
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 36.6 bits (83), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 32/146 (21%), Positives = 59/146 (40%), Gaps = 15/146 (10%)
Query: 193 PPYEWQVYNTLGGSHGVPRVHFKG-----RQGDYYVMVMDMLGPSLWDVWNN---NSHTM 244
PP +N LGG + H K Q Y ++M+ + +L V + + ++
Sbjct: 79 PPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPDTLHKVLKSFIRSGRSI 138
Query: 245 SIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKW-- 302
+ +++ + + +HS G H D+KP+N L+ + L L D G A K
Sbjct: 139 PMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVN----SKDNTLKLCDFGSAKKLIP 194
Query: 303 -RDSTTGMHVEYDQRPDVFRGTVRYA 327
S + + + P++ G Y
Sbjct: 195 SEPSVAXICSRFYRAPELMLGATEYT 220
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 36.6 bits (83), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 88/225 (39%), Gaps = 28/225 (12%)
Query: 141 YRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPY--EWQ 198
YRL + +GKG F +V + R + TG EVA+K ++ + E +
Sbjct: 16 YRLLKTIGKGNFAKVKLARHIL-------TGK---EVAVKIIDKTQLNSSSLQKLFREVR 65
Query: 199 VYNTLGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAIS 258
+ L + V + Y++ G ++D + E A + +S
Sbjct: 66 IXKVLNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFR-QIVS 124
Query: 259 ILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYDQRPD 318
++ H K VH D+K EN LL + + + D G + ++ + + D
Sbjct: 125 AVQYCHQKFIVHRDLKAENLLLDA-----DXNIKIADFGFSNEF---------TFGNKLD 170
Query: 319 VFRGTVRYASVHAHLGRTGSRRD-DLESLAYTLIFLLRGRLPWQG 362
F G YA+ G+ + D+ SL L L+ G LP+ G
Sbjct: 171 AFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG 215
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 36.6 bits (83), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 62/149 (41%), Gaps = 17/149 (11%)
Query: 224 MVMDML-GPSLWDVWNN-------NSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKP 275
+VM +L G S+ D+ + S + +A I E + LE +H G +H DVK
Sbjct: 90 LVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKA 149
Query: 276 ENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGR 335
N LLG G+ + + D G++ TG + ++ F GT + +
Sbjct: 150 GNILLGEDGS-----VQIADFGVSAFL---ATGGDITRNKVRKTFVGTPCWMAPEVMEQV 201
Query: 336 TG-SRRDDLESLAYTLIFLLRGRLPWQGY 363
G + D+ S T I L G P+ Y
Sbjct: 202 RGYDFKADIWSFGITAIELATGAAPYHKY 230
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 36.6 bits (83), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 10/85 (11%)
Query: 219 GDYYVMVMDML-GPSLWDVWNNNSHT-MSIEMVACIAIEAISILEKMHSKGYVHGDVKPE 276
GD +VM+ L G +L D+ +HT M+ E +A + + + L +H++G +H D+K +
Sbjct: 114 GDELWVVMEFLEGGALTDIV---THTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSD 170
Query: 277 NFLLGPPGTPDEKKLFLVDLGLATK 301
+ LL G ++ L D G +
Sbjct: 171 SILLTSDG-----RIKLSDFGFCAQ 190
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 36.6 bits (83), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 74/191 (38%), Gaps = 28/191 (14%)
Query: 141 YRLERKLGKGGFGQVYV----GRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYE 196
Y LE +G+G +G+V + G R+ A ++ VE +F+ + P
Sbjct: 11 YTLENTIGRGSWGEVKIAVQKGTRIR--RAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNI 68
Query: 197 WQVYNTLGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEA 256
++Y T F+ Y VM + G V + S A I +
Sbjct: 69 IRLYET-----------FEDNTDIYLVMELCTGGELFERVVHKRVFRESD--AARIMKDV 115
Query: 257 ISILEKMHSKGYVHGDVKPENFLL--GPPGTPDEKKLFLVDLGLATKWRDST---TGMHV 311
+S + H H D+KPENFL P +P L L+D GLA +++ T +
Sbjct: 116 LSAVAYCHKLNVAHRDLKPENFLFLTDSPDSP----LKLIDFGLAARFKPGKMMRTKVGT 171
Query: 312 EYDQRPDVFRG 322
Y P V G
Sbjct: 172 PYYVSPQVLEG 182
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 36.2 bits (82), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 62/149 (41%), Gaps = 17/149 (11%)
Query: 224 MVMDML-GPSLWDVWNN-------NSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKP 275
+VM +L G S+ D+ + S + +A I E + LE +H G +H DVK
Sbjct: 85 LVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKA 144
Query: 276 ENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGR 335
N LLG G+ + + D G++ TG + ++ F GT + +
Sbjct: 145 GNILLGEDGS-----VQIADFGVSAFL---ATGGDITRNKVRKTFVGTPCWMAPEVMEQV 196
Query: 336 TG-SRRDDLESLAYTLIFLLRGRLPWQGY 363
G + D+ S T I L G P+ Y
Sbjct: 197 RGYDFKADIWSFGITAIELATGAAPYHKY 225
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 36.2 bits (82), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 38/64 (59%), Gaps = 5/64 (7%)
Query: 219 GDYYVMVMDML-GPSLWDVWNNNSHT-MSIEMVACIAIEAISILEKMHSKGYVHGDVKPE 276
GD +VM+ L G +L D+ +HT M+ E +A + + + L +H++G +H D+K +
Sbjct: 89 GDELWVVMEFLEGGALTDIV---THTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSD 145
Query: 277 NFLL 280
+ LL
Sbjct: 146 SILL 149
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 36.2 bits (82), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 7/60 (11%)
Query: 250 ACIAIEAISILEK-------MHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKW 302
A + +E I++L++ +HS VH D+KP N L+ P + K + D GL K
Sbjct: 114 AHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKL 173
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 36.2 bits (82), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 63/151 (41%), Gaps = 20/151 (13%)
Query: 141 YRLERKLGKGGFGQVYV-----GRRVSPV----NANERTGPGAVEVALKFEHRSSKGCNY 191
Y + RKLG G F V++ G++ + +A T E+ L +S + +
Sbjct: 39 YHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLL---KSVRNSDP 95
Query: 192 GPPYEWQVYNTLGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWD-VWNNNSHTMSIEMVA 250
P V L G G + MV ++LG L + +N + + V
Sbjct: 96 NDPNREMVVQLLDD------FKISGVNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVK 149
Query: 251 CIAIEAISILEKMHSKG-YVHGDVKPENFLL 280
I + + L+ +H+K +H D+KPEN LL
Sbjct: 150 KIIQQVLQGLDYLHTKCRIIHTDIKPENILL 180
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 36.2 bits (82), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 38/64 (59%), Gaps = 5/64 (7%)
Query: 219 GDYYVMVMDML-GPSLWDVWNNNSHT-MSIEMVACIAIEAISILEKMHSKGYVHGDVKPE 276
GD +VM+ L G +L D+ +HT M+ E +A + + + L +H++G +H D+K +
Sbjct: 93 GDELWVVMEFLEGGALTDIV---THTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSD 149
Query: 277 NFLL 280
+ LL
Sbjct: 150 SILL 153
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 36.2 bits (82), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 63/151 (41%), Gaps = 20/151 (13%)
Query: 141 YRLERKLGKGGFGQVYV-----GRRVSPV----NANERTGPGAVEVALKFEHRSSKGCNY 191
Y + RKLG G F V++ G++ + +A T E+ L +S + +
Sbjct: 23 YHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLL---KSVRNSDP 79
Query: 192 GPPYEWQVYNTLGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWD-VWNNNSHTMSIEMVA 250
P V L G G + MV ++LG L + +N + + V
Sbjct: 80 NDPNREMVVQLLDD------FKISGVNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVK 133
Query: 251 CIAIEAISILEKMHSKG-YVHGDVKPENFLL 280
I + + L+ +H+K +H D+KPEN LL
Sbjct: 134 KIIQQVLQGLDYLHTKCRIIHTDIKPENILL 164
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 36.2 bits (82), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 71/166 (42%), Gaps = 18/166 (10%)
Query: 141 YRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRS--SKGCNYGPPYEWQ 198
Y++ + LG+G FG+V + + TG +VALK ++ +K G
Sbjct: 16 YQIVKTLGEGSFGKVKLAYHTT-------TGQ---KVALKIINKKVLAKSDMQGRIEREI 65
Query: 199 VYNTLGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAIS 258
Y L + +++ + D +MV++ G L+D + MS + + IS
Sbjct: 66 SYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFD-YIVQRDKMSEQEARRFFQQIIS 124
Query: 259 ILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRD 304
+E H VH D+KPEN LL + + + D GL+ D
Sbjct: 125 AVEYCHRHKIVHRDLKPENLLLD-----EHLNVKIADFGLSNIMTD 165
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 36.2 bits (82), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 63/163 (38%), Gaps = 15/163 (9%)
Query: 141 YRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVY 200
Y+L +LGKG F V RR + P E A K + E +
Sbjct: 6 YQLFEELGKGAFSVV---RRCMKI-------PTGQEYAAKIINTKKLSARDHQKLEREAR 55
Query: 201 NTLGGSH-GVPRVHFKGRQGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAIS 258
H + R+H + ++ +V D++ G L++ + + CI + +
Sbjct: 56 ICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQ-QILE 114
Query: 259 ILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATK 301
+ H G VH D+KPEN LL K L D GLA +
Sbjct: 115 SVNHCHLNGIVHRDLKPENLLLASKSKGAAVK--LADFGLAIE 155
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 35.8 bits (81), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 95/242 (39%), Gaps = 29/242 (11%)
Query: 126 TAPLPEKIAVGGSPM----YRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKF 181
+APL E V P Y R LGKGGF + Y ++ ++ E V ++
Sbjct: 9 SAPLKEIPDVLVDPRTMKRYMRGRFLGKGGFAKCY---EITDMDTKEVFAGKVVPKSMLL 65
Query: 182 E-HRSSKGCNYGPPYEWQVYNTLGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNN 240
+ H+ K E ++ +L H V F YV++ SL ++
Sbjct: 66 KPHQKEKMST-----EIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRR 120
Query: 241 SHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLAT 300
E + + I ++ +H+ +H D+K N L D+ + + D GLAT
Sbjct: 121 KAVTEPEARYFMR-QTIQGVQYLHNNRVIHRDLKLGNLFLN-----DDMDVKIGDFGLAT 174
Query: 301 KWRDSTTGMHVEYD-QRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLP 359
K +E+D +R GT Y + + S D+ SL L LL G+ P
Sbjct: 175 K---------IEFDGERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPP 225
Query: 360 WQ 361
++
Sbjct: 226 FE 227
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 35.8 bits (81), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 71/166 (42%), Gaps = 18/166 (10%)
Query: 141 YRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRS--SKGCNYGPPYEWQ 198
Y++ + LG+G FG+V + + TG +VALK ++ +K G
Sbjct: 15 YQIVKTLGEGSFGKVKLAYHTT-------TGQ---KVALKIINKKVLAKSDMQGRIEREI 64
Query: 199 VYNTLGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAIS 258
Y L + +++ + D +MV++ G L+D + MS + + IS
Sbjct: 65 SYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFD-YIVQRDKMSEQEARRFFQQIIS 123
Query: 259 ILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRD 304
+E H VH D+KPEN LL + + + D GL+ D
Sbjct: 124 AVEYCHRHKIVHRDLKPENLLLD-----EHLNVKIADFGLSNIMTD 164
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 35.8 bits (81), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 71/166 (42%), Gaps = 18/166 (10%)
Query: 141 YRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRS--SKGCNYGPPYEWQ 198
Y++ + LG+G FG+V + + TG +VALK ++ +K G
Sbjct: 6 YQIVKTLGEGSFGKVKLAYHTT-------TGQ---KVALKIINKKVLAKSDMQGRIEREI 55
Query: 199 VYNTLGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAIS 258
Y L + +++ + D +MV++ G L+D + MS + + IS
Sbjct: 56 SYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFD-YIVQRDKMSEQEARRFFQQIIS 114
Query: 259 ILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRD 304
+E H VH D+KPEN LL + + + D GL+ D
Sbjct: 115 AVEYCHRHKIVHRDLKPENLLLD-----EHLNVKIADFGLSNIMTD 155
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 35.8 bits (81), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 90/225 (40%), Gaps = 28/225 (12%)
Query: 141 YRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPY--EWQ 198
YRL + +GKG F +V + R + TG EVA+K ++ + E +
Sbjct: 9 YRLLKTIGKGNFAKVKLARHIL-------TGK---EVAVKIIDKTQLNSSSLQKLFREVR 58
Query: 199 VYNTLGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAIS 258
+ L + V + Y+++ G ++D + E A + +S
Sbjct: 59 IMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFR-QIVS 117
Query: 259 ILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYDQRPD 318
++ H K VH D+K EN LL + + + D G + ++ + + D
Sbjct: 118 AVQYCHQKFIVHRDLKAENLLLDA-----DMNIKIADFGFSNEF---------TFGNKLD 163
Query: 319 VFRGTVRYASVHAHLGRTGSRRD-DLESLAYTLIFLLRGRLPWQG 362
F G+ YA+ G+ + D+ SL L L+ G LP+ G
Sbjct: 164 TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG 208
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 35.8 bits (81), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 36/178 (20%), Positives = 79/178 (44%), Gaps = 23/178 (12%)
Query: 247 EMVACIAI--EAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLAT---K 301
EM+ I I + ++ +H+K +H D+K N L ++ + + D GLAT +
Sbjct: 107 EMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLH-----EDLTVKIGDFGLATVKSR 161
Query: 302 WRDSTTGMHVEYDQRPDVFRGTVRYAS---VHAHLGRTGSRRDDLESLAYTLIFLLRGRL 358
W +G H +++Q G++ + + + S + D+ + L L+ G+L
Sbjct: 162 W----SGSH-QFEQ----LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQL 212
Query: 359 PWQGYQGENK-GFLVCKKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYIS 415
P+ ++ F+V + ++ + CP ++ + + K DE P + + ++
Sbjct: 213 PYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILA 270
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 35.8 bits (81), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 71/166 (42%), Gaps = 18/166 (10%)
Query: 141 YRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRS--SKGCNYGPPYEWQ 198
Y++ + LG+G FG+V + + TG +VALK ++ +K G
Sbjct: 10 YQIVKTLGEGSFGKVKLAYHTT-------TGQ---KVALKIINKKVLAKSDMQGRIEREI 59
Query: 199 VYNTLGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAIS 258
Y L + +++ + D +MV++ G L+D + MS + + IS
Sbjct: 60 SYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFD-YIVQRDKMSEQEARRFFQQIIS 118
Query: 259 ILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRD 304
+E H VH D+KPEN LL + + + D GL+ D
Sbjct: 119 AVEYCHRHKIVHRDLKPENLLLD-----EHLNVKIADFGLSNIMTD 159
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 35.8 bits (81), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 63/163 (38%), Gaps = 15/163 (9%)
Query: 141 YRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVY 200
Y+L +LGKG F V RR + P E A K + E +
Sbjct: 6 YQLFEELGKGAFSVV---RRCMKI-------PTGQEYAAKIINTKKLSARDHQKLEREAR 55
Query: 201 NTLGGSH-GVPRVHFKGRQGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAIS 258
H + R+H + ++ +V D++ G L++ + + CI + +
Sbjct: 56 ICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQ-QILE 114
Query: 259 ILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATK 301
+ H G VH D+KPEN LL K L D GLA +
Sbjct: 115 SVNHCHLNGIVHRDLKPENLLLASKSKGAAVK--LADFGLAIE 155
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 35.8 bits (81), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 43/85 (50%), Gaps = 7/85 (8%)
Query: 224 MVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPP 283
+V ++G L ++ +S E V + + + L+ +HS G +H D+KP N +
Sbjct: 102 LVTTLMGADLNNIVK--CQALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVN-- 157
Query: 284 GTPDEKKLFLVDLGLATKWRDSTTG 308
++ +L ++D GLA + + TG
Sbjct: 158 ---EDCELRILDFGLARQADEEMTG 179
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 35.8 bits (81), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 105/263 (39%), Gaps = 48/263 (18%)
Query: 142 RLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPP---YEWQ 198
RLE KLG+G FG+V++G T G VA+K + K P E Q
Sbjct: 270 RLEVKLGQGCFGEVWMG-----------TWNGTTRVAIK----TLKPGTMSPEAFLQEAQ 314
Query: 199 VYNTLGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHT-----MSIEMVACIA 253
V L V +++ + Y++ M SL D + ++M A IA
Sbjct: 315 VMKKLRHEKLV-QLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIA 373
Query: 254 IEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEY 313
++ +E+M+ YVH D++ N L+G + + D GLA D+ EY
Sbjct: 374 -SGMAYVERMN---YVHRDLRAANILVG-----ENLVCKVADFGLARLIEDN------EY 418
Query: 314 DQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFL-LRGRLPWQGY-------QG 365
R + +++ + A L + + D+ S L L +GR+P+ G Q
Sbjct: 419 TARQGA-KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 477
Query: 366 ENKGFLVCKKKMATSPDGLCCFC 388
E + C + S L C C
Sbjct: 478 ERGYRMPCPPECPESLHDLMCQC 500
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 35.8 bits (81), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 64/155 (41%), Gaps = 15/155 (9%)
Query: 146 KLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNTLGG 205
K+G+G +G VY R N+ TG ++ + ++G E + L
Sbjct: 10 KIGEGTYGVVYKAR-------NKLTGEVVALKKIRLD-TETEGVPSTAIREISLLKELNH 61
Query: 206 SHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHT-MSIEMVACIAIEAISILEKMH 264
+ V + + Y +V + L L D + ++ T + + ++ + + L H
Sbjct: 62 PNIVKLLDVIHTENKLY-LVFEFLHQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 265 SKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLA 299
S +H D+KPEN L+ G + L D GLA
Sbjct: 121 SHRVLHRDLKPENLLINTEGA-----IKLADFGLA 150
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 35.8 bits (81), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 35/175 (20%), Positives = 78/175 (44%), Gaps = 17/175 (9%)
Query: 247 EMVACIAI--EAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRD 304
EM+ I I + ++ +H+K +H D+K N L ++ + + D GLAT +
Sbjct: 102 EMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLH-----EDLTVKIGDFGLATV-KS 155
Query: 305 STTGMHVEYDQRPDVFRGTVRYAS---VHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQ 361
+G H +++Q G++ + + + S + D+ + L L+ G+LP+
Sbjct: 156 RWSGSH-QFEQ----LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYS 210
Query: 362 GYQGENK-GFLVCKKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYIS 415
++ F+V + ++ + CP ++ + + K DE P + + ++
Sbjct: 211 NINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILA 265
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 35.8 bits (81), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 35/175 (20%), Positives = 78/175 (44%), Gaps = 17/175 (9%)
Query: 247 EMVACIAI--EAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRD 304
EM+ I I + ++ +H+K +H D+K N L ++ + + D GLAT +
Sbjct: 102 EMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLH-----EDLTVKIGDFGLATV-KS 155
Query: 305 STTGMHVEYDQRPDVFRGTVRYAS---VHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQ 361
+G H +++Q G++ + + + S + D+ + L L+ G+LP+
Sbjct: 156 RWSGSH-QFEQ----LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYS 210
Query: 362 GYQGENK-GFLVCKKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYIS 415
++ F+V + ++ + CP ++ + + K DE P + + ++
Sbjct: 211 NINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILA 265
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 35.4 bits (80), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 90/225 (40%), Gaps = 28/225 (12%)
Query: 141 YRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPY--EWQ 198
YRL + +GKG F +V + R + TG EVA++ ++ + E +
Sbjct: 16 YRLLKTIGKGNFAKVKLARHIL-------TGK---EVAVRIIDKTQLNSSSLQKLFREVR 65
Query: 199 VYNTLGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAIS 258
+ L + V + Y+++ G ++D + E A + +S
Sbjct: 66 IMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVS 124
Query: 259 ILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYDQRPD 318
++ H K VH D+K EN LL + + + D G + ++ + + D
Sbjct: 125 AVQYCHQKFIVHRDLKAENLLLDA-----DMNIKIADFGFSNEF---------TFGNKLD 170
Query: 319 VFRGTVRYASVHAHLGRTGSRRD-DLESLAYTLIFLLRGRLPWQG 362
F G+ YA+ G+ + D+ SL L L+ G LP+ G
Sbjct: 171 EFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG 215
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 46/99 (46%), Gaps = 3/99 (3%)
Query: 207 HGVPRVHFKGRQGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHS 265
H V +H V++++++ G L+D + ++S E + + + +H+
Sbjct: 75 HNVITLHDVYENRTDVVLILELVSGGELFD-FLAQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 266 KGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRD 304
K H D+KPEN +L P + L+D GLA + D
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPI-PHIKLIDFGLAHEIED 171
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 41/189 (21%), Positives = 75/189 (39%), Gaps = 23/189 (12%)
Query: 146 KLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNTLGG 205
KLG+G + VY G+ ++ T ++ EH C E + L
Sbjct: 9 KLGEGTYATVYKGK-------SKLTDNLVALKEIRLEHEEGAPCT--AIREVSLLKDLKH 59
Query: 206 SHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHS 265
++ V +H +V + L L ++ + +++ V + + L H
Sbjct: 60 ANIVT-LHDIIHTEKSLTLVFEYLDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHR 118
Query: 266 KGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLA------TKWRDSTTGMHVEYDQRPDV 319
+ +H D+KP+N L+ G +L L D GLA TK D+ + + PD+
Sbjct: 119 QKVLHRDLKPQNLLINERG-----ELKLADFGLARAKSIPTKTYDNEVV--TLWYRPPDI 171
Query: 320 FRGTVRYAS 328
G+ Y++
Sbjct: 172 LLGSTDYST 180
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 46/99 (46%), Gaps = 3/99 (3%)
Query: 207 HGVPRVHFKGRQGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHS 265
H V +H V++++++ G L+D + ++S E + + + +H+
Sbjct: 75 HNVITLHDVYENRTDVVLILELVSGGELFD-FLAQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 266 KGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRD 304
K H D+KPEN +L P + L+D GLA + D
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPI-PHIKLIDFGLAHEIED 171
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 46/99 (46%), Gaps = 3/99 (3%)
Query: 207 HGVPRVHFKGRQGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHS 265
H V +H V++++++ G L+D + ++S E + + + +H+
Sbjct: 75 HNVITLHDVYENRTDVVLILELVSGGELFD-FLAQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 266 KGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRD 304
K H D+KPEN +L P + L+D GLA + D
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPI-PHIKLIDFGLAHEIED 171
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 4/45 (8%)
Query: 255 EAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLA 299
E + L+ HS G +H DVKP N L+ + +KL L+D GLA
Sbjct: 139 EILKALDYCHSMGIMHRDVKPHNVLID----HEHRKLRLIDWGLA 179
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 46/99 (46%), Gaps = 3/99 (3%)
Query: 207 HGVPRVHFKGRQGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHS 265
H V +H V++++++ G L+D + ++S E + + + +H+
Sbjct: 75 HNVITLHDVYENRTDVVLILELVSGGELFD-FLAQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 266 KGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRD 304
K H D+KPEN +L P + L+D GLA + D
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPI-PHIKLIDFGLAHEIED 171
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 70/159 (44%), Gaps = 17/159 (10%)
Query: 147 LGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNTLGGS 206
LG G FGQV+ E T G A + R K E V N L +
Sbjct: 97 LGGGRFGQVH---------KCEETATGLKLAAKIIKTRGMKD-KEEVKNEISVMNQLDHA 146
Query: 207 HGVPRVHFKGRQGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISI-LEKMH 264
+ + + D V+VM+ + G L+D + S+ ++ E+ + ++ I + MH
Sbjct: 147 NLIQLYDAFESKNDI-VLVMEYVDGGELFDRIIDESYNLT-ELDTILFMKQICEGIRHMH 204
Query: 265 SKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWR 303
+H D+KPEN L D K++ ++D GLA +++
Sbjct: 205 QMYILHLDLKPENILC---VNRDAKQIKIIDFGLARRYK 240
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 46/99 (46%), Gaps = 3/99 (3%)
Query: 207 HGVPRVHFKGRQGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHS 265
H V +H V++++++ G L+D + ++S E + + + +H+
Sbjct: 75 HNVITLHDVYENRTDVVLILELVSGGELFD-FLAQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 266 KGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRD 304
K H D+KPEN +L P + L+D GLA + D
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPI-PHIKLIDFGLAHEIED 171
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 263 MHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATK 301
+HSK H D+KPEN +L P+ ++ L+D G+A K
Sbjct: 124 LHSKRIAHFDLKPENIMLLDKNVPN-PRIKLIDFGIAHK 161
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 81/222 (36%), Gaps = 23/222 (10%)
Query: 141 YRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVY 200
Y+L +GKG F V RR + + K R + E ++
Sbjct: 6 YQLYEDIGKGAFSVV---RRCVKLCTGHEYAAKIINTK-KLSARDHQKLER----EARIC 57
Query: 201 NTLGGSHGVPRVHFKGRQGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISI 259
L S + R+H + ++ +V D++ G L++ + + CI + +
Sbjct: 58 RLLKHS-NIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQ-QILEA 115
Query: 260 LEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYDQRPDV 319
+ H G VH D+KPEN LL G A K D + V+ DQ+
Sbjct: 116 VLHCHQMGVVHRDLKPENLLLASKCK-----------GAAVKLADFGLAIEVQGDQQAWF 164
Query: 320 -FRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPW 360
F GT Y S + D+ + L LL G P+
Sbjct: 165 GFAGTPGYLSPEVLRKEAYGKPVDIWACGVILYILLVGYPPF 206
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 105/263 (39%), Gaps = 48/263 (18%)
Query: 142 RLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPP---YEWQ 198
RLE KLG+G FG+V++G T G VA+K + K P E Q
Sbjct: 21 RLEVKLGQGCFGEVWMG-----------TWNGTTRVAIK----TLKPGTMSPEAFLQEAQ 65
Query: 199 VYNTLGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNN-----SHTMSIEMVACIA 253
V L V +++ + Y+++ M SL D ++M A IA
Sbjct: 66 VMKKLRHEKLV-QLYAVVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIA 124
Query: 254 IEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEY 313
++ +E+M+ YVH D++ N L+G + + D GLA D+ EY
Sbjct: 125 -SGMAYVERMN---YVHRDLRAANILVG-----ENLVCKVADFGLARLIEDN------EY 169
Query: 314 DQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFL-LRGRLPWQGY-------QG 365
R + +++ + A L + + D+ S L L +GR+P+ G Q
Sbjct: 170 TARQGA-KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 228
Query: 366 ENKGFLVCKKKMATSPDGLCCFC 388
E + C + S L C C
Sbjct: 229 ERGYRMPCPPECPESLHDLMCQC 251
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 263 MHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATK 301
+HSK H D+KPEN +L P+ ++ L+D G+A K
Sbjct: 145 LHSKRIAHFDLKPENIMLLDKNVPN-PRIKLIDFGIAHK 182
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 105/263 (39%), Gaps = 48/263 (18%)
Query: 142 RLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPP---YEWQ 198
RLE KLG+G FG+V++G T G VA+K + K P E Q
Sbjct: 14 RLEVKLGQGCFGEVWMG-----------TWNGTTRVAIK----TLKPGTMSPEAFLQEAQ 58
Query: 199 VYNTLGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHT-----MSIEMVACIA 253
V L V +++ + Y++ M SL D + ++M A IA
Sbjct: 59 VMKKLRHEKLV-QLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIA 117
Query: 254 IEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEY 313
++ +E+M+ YVH D++ N L+G + + D GLA D+ EY
Sbjct: 118 -SGMAYVERMN---YVHRDLRAANILVG-----ENLVCKVADFGLARLIEDN------EY 162
Query: 314 DQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFL-LRGRLPWQGY-------QG 365
R + +++ + A L + + D+ S L L +GR+P+ G Q
Sbjct: 163 TARQGA-KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 221
Query: 366 ENKGFLVCKKKMATSPDGLCCFC 388
E + C + S L C C
Sbjct: 222 ERGYRMPCPPECPESLHDLMCQC 244
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 263 MHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATK 301
+HSK H D+KPEN +L P+ ++ L+D G+A K
Sbjct: 131 LHSKRIAHFDLKPENIMLLDKNVPN-PRIKLIDFGIAHK 168
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 101/266 (37%), Gaps = 54/266 (20%)
Query: 142 RLERKLGKGGFGQVYVG----------RRVSPVNANERTGPGAVEVALKFEHRSSKGCNY 191
RLE KLG+G FG+V++G + + P + +V K H Y
Sbjct: 21 RLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL-Y 79
Query: 192 GPPYEWQVYNTLG-GSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVA 250
E +Y + S G KG G Y + P L ++M A
Sbjct: 80 AVVSEEPIYIVMEYMSKGCLLDFLKGEMGKYLRL------PQL------------VDMAA 121
Query: 251 CIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMH 310
IA ++ +E+M+ YVH D++ N L+G + + D GLA D+
Sbjct: 122 QIA-SGMAYVERMN---YVHRDLRAANILVG-----ENLVCKVADFGLARLIEDN----- 167
Query: 311 VEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFL-LRGRLPWQGY------ 363
EY R + +++ + A L + + D+ S L L +GR+P+ G
Sbjct: 168 -EYTARQGA-KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL 225
Query: 364 -QGENKGFLVCKKKMATSPDGLCCFC 388
Q E + C + S L C C
Sbjct: 226 DQVERGYRMPCPPECPESLHDLMCQC 251
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 105/263 (39%), Gaps = 48/263 (18%)
Query: 142 RLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPP---YEWQ 198
RLE KLG+G FG+V++G T G VA+K + K P E Q
Sbjct: 187 RLEVKLGQGCFGEVWMG-----------TWNGTTRVAIK----TLKPGTMSPEAFLQEAQ 231
Query: 199 VYNTLGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHT-----MSIEMVACIA 253
V L V +++ + Y++ M SL D + ++M A IA
Sbjct: 232 VMKKLRHEKLV-QLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIA 290
Query: 254 IEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEY 313
++ +E+M+ YVH D++ N L+G + + D GLA D+ EY
Sbjct: 291 -SGMAYVERMN---YVHRDLRAANILVG-----ENLVCKVADFGLARLIEDN------EY 335
Query: 314 DQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFL-LRGRLPWQGY-------QG 365
R + +++ + A L + + D+ S L L +GR+P+ G Q
Sbjct: 336 TARQGA-KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 394
Query: 366 ENKGFLVCKKKMATSPDGLCCFC 388
E + C + S L C C
Sbjct: 395 ERGYRMPCPPECPESLHDLMCQC 417
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 64/303 (21%), Positives = 106/303 (34%), Gaps = 48/303 (15%)
Query: 141 YRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVY 200
+ + R +GKG FG+V + ++ N ++ K R+ + E Q+
Sbjct: 17 FEILRAIGKGSFGKVCIVQK----NDTKKMYAMKYMNKQKCVERNEVRNVFK---ELQIM 69
Query: 201 NTLGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISIL 260
L V + + D +++V +LG L N H E V E + L
Sbjct: 70 QGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVH-FKEETVKLFICELVMAL 128
Query: 261 EKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYDQRPDVF 320
+ + ++ +H D+KP+N LL G + + D +A T +
Sbjct: 129 DYLQNQRIIHRDMKPDNILLDEHG-----HVHITDFNIAAMLPRET---------QITTM 174
Query: 321 RGTVRYASVHAHLGRTG---SRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCKKKM 377
GT Y + R G S D SL T LLRGR P+ K++
Sbjct: 175 AGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSS------TSSKEI 228
Query: 378 ATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQK 437
+ + P+ + Q + +SL ++ PNPD R Q
Sbjct: 229 VHTFETTVVTYPSAWSQ-----------------EMVSLLKKLLEPNPDQRFSQLSDVQN 271
Query: 438 LIY 440
Y
Sbjct: 272 FPY 274
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 105/263 (39%), Gaps = 48/263 (18%)
Query: 142 RLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPP---YEWQ 198
RLE KLG+G FG+V++G T G VA+K + K P E Q
Sbjct: 187 RLEVKLGQGCFGEVWMG-----------TWNGTTRVAIK----TLKPGTMSPEAFLQEAQ 231
Query: 199 VYNTLGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHT-----MSIEMVACIA 253
V L V +++ + Y++ M SL D + ++M A IA
Sbjct: 232 VMKKLRHEKLV-QLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIA 290
Query: 254 IEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEY 313
++ +E+M+ YVH D++ N L+G + + D GLA D+ EY
Sbjct: 291 -SGMAYVERMN---YVHRDLRAANILVG-----ENLVCKVADFGLARLIEDN------EY 335
Query: 314 DQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFL-LRGRLPWQGY-------QG 365
R + +++ + A L + + D+ S L L +GR+P+ G Q
Sbjct: 336 TARQGA-KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 394
Query: 366 ENKGFLVCKKKMATSPDGLCCFC 388
E + C + S L C C
Sbjct: 395 ERGYRMPCPPECPESLHDLMCQC 417
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 68/167 (40%), Gaps = 23/167 (13%)
Query: 141 YRLERKLGKGGFGQVY--VGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQ 198
Y L +KLGKG +G V+ + RR V A ++ F++ + + E
Sbjct: 11 YELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDA-------FQNSTDAQRTFR---EIM 60
Query: 199 VYNTLGGSHGVPRVHFKGRQG---DYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIE 255
+ L G + + R D Y +V D + L V N + + +
Sbjct: 61 ILTELSGHENIVNLLNVLRADNDRDVY-LVFDYMETDLHAVIRAN--ILEPVHKQYVVYQ 117
Query: 256 AISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKW 302
I +++ +HS G +H D+KP N LL E + + D GL+ +
Sbjct: 118 LIKVIKYLHSGGLLHRDMKPSNILLNA-----ECHVKVADFGLSRSF 159
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 42/83 (50%), Gaps = 3/83 (3%)
Query: 223 VMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLG 281
V++++++ G L+D + ++S E + + + +H+K H D+KPEN +L
Sbjct: 91 VLILELVSGGELFD-FLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLL 149
Query: 282 PPGTPDEKKLFLVDLGLATKWRD 304
P + L+D GLA + D
Sbjct: 150 DKNIPI-PHIKLIDFGLAHEIED 171
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 28/125 (22%), Positives = 53/125 (42%), Gaps = 9/125 (7%)
Query: 208 GVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKG 267
+ R+H +V + L +++ + + E+V + + L HS+
Sbjct: 62 NIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRN 121
Query: 268 YVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKW----RDSTTGMHVEYDQRPDVFRGT 323
+H D+KP+N L+ G +L L D GLA + R + + + + PDV G
Sbjct: 122 VLHRDLKPQNLLINRNG-----ELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGA 176
Query: 324 VRYAS 328
Y++
Sbjct: 177 KLYST 181
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 68/166 (40%), Gaps = 15/166 (9%)
Query: 135 VGGSPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPP 194
+G ++ K+G+G +G VY R N+ TG ++ + ++G
Sbjct: 1 LGSMENFQKVEKIGEGTYGVVYKAR-------NKLTGEVVALKKIRLD-TETEGVPSTAI 52
Query: 195 YEWQVYNTLGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHT-MSIEMVACIA 253
E + L + V + + Y +V + L L D + ++ T + + ++
Sbjct: 53 REISLLKELNHPNIVKLLDVIHTENKLY-LVFEFLSMDLKDFMDASALTGIPLPLIKSYL 111
Query: 254 IEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLA 299
+ + L HS +H D+KP+N L+ G + L D GLA
Sbjct: 112 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGA-----IKLADFGLA 152
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 4/45 (8%)
Query: 255 EAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLA 299
E + L+ HS G +H DVKP N ++ + +KL L+D GLA
Sbjct: 139 EILKALDYCHSMGIMHRDVKPHNVMID----HEHRKLRLIDWGLA 179
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 49/111 (44%), Gaps = 17/111 (15%)
Query: 249 VACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTG 308
V+ I+ ++ L + H +H DVKP N L+ G ++ L D G++ + DS
Sbjct: 171 VSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRG-----EIKLCDFGVSGQLIDSMA- 222
Query: 309 MHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLP 359
+ F GT Y S G S + D+ S+ +L+ + GR P
Sbjct: 223 ---------NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 264
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 4/45 (8%)
Query: 255 EAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLA 299
E + L+ HS G +H DVKP N ++ + +KL L+D GLA
Sbjct: 139 EILKALDYCHSMGIMHRDVKPHNVMID----HEHRKLRLIDWGLA 179
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 4/45 (8%)
Query: 255 EAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLA 299
E + L+ HS G +H DVKP N ++ + +KL L+D GLA
Sbjct: 139 EILKALDYCHSMGIMHRDVKPHNVMID----HEHRKLRLIDWGLA 179
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 4/45 (8%)
Query: 255 EAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLA 299
E + L+ HS G +H DVKP N ++ + +KL L+D GLA
Sbjct: 139 EILKALDYCHSMGIMHRDVKPHNVMID----HEHRKLRLIDWGLA 179
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 4/45 (8%)
Query: 255 EAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLA 299
E + L+ HS G +H DVKP N ++ + +KL L+D GLA
Sbjct: 139 EILKALDYCHSMGIMHRDVKPHNVMID----HEHRKLRLIDWGLA 179
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 4/45 (8%)
Query: 255 EAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLA 299
E + L+ HS G +H DVKP N ++ + +KL L+D GLA
Sbjct: 139 EILKALDYCHSMGIMHRDVKPHNVMID----HEHRKLRLIDWGLA 179
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 4/45 (8%)
Query: 255 EAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLA 299
E + L+ HS G +H DVKP N ++ + +KL L+D GLA
Sbjct: 138 EILKALDYCHSMGIMHRDVKPHNVMID----HEHRKLRLIDWGLA 178
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 4/45 (8%)
Query: 255 EAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLA 299
E + L+ HS G +H DVKP N ++ + +KL L+D GLA
Sbjct: 139 EILKALDYCHSMGIMHRDVKPHNVMID----HEHRKLRLIDWGLA 179
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 4/45 (8%)
Query: 255 EAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLA 299
E + L+ HS G +H DVKP N ++ + +KL L+D GLA
Sbjct: 139 EILKALDYCHSMGIMHRDVKPHNVMID----HEHRKLRLIDWGLA 179
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 34.7 bits (78), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 77/204 (37%), Gaps = 23/204 (11%)
Query: 108 SGGPSNDKANAGGEDEGSTAPLPEKIAVGGSPMYRLERKLGKGGFGQVYVGRRVSPVNAN 167
S ++D A E++ T P + + L R +G+G FG V+ G +SP N
Sbjct: 360 SVSETDDYAEIIDEEDTYTMPSTRDYEIQRERI-ELGRCIGEGQFGDVHQGIYMSPENP- 417
Query: 168 ERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNTL-----GGSHGVPRVHFKGRQGDYY 222
A+ VA+K + K C E + L H V + +
Sbjct: 418 ------AMAVAIK----TCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWI 467
Query: 223 VMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGP 282
+M + LG L ++ + + A + + L + SK +VH D+ N L+
Sbjct: 468 IMELCTLG-ELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSA 526
Query: 283 PGTPDEKKLFLVDLGLATKWRDST 306
+ L D GL+ DST
Sbjct: 527 TDC-----VKLGDFGLSRYMEDST 545
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 34.7 bits (78), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/109 (22%), Positives = 46/109 (42%), Gaps = 9/109 (8%)
Query: 224 MVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPP 283
+V + + L V + N + + + + + H +H D+KP+N L+
Sbjct: 96 LVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSD 155
Query: 284 GTPDEKKLFLVDLGLATKW----RDSTTGMHVEYDQRPDVFRGTVRYAS 328
G L L D GLA + R T + + + PDV G+ +Y++
Sbjct: 156 GA-----LKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYST 199
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 34.7 bits (78), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 68/166 (40%), Gaps = 15/166 (9%)
Query: 135 VGGSPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPP 194
+G ++ K+G+G +G VY R N+ TG ++ + ++G
Sbjct: 2 LGSMENFQKVEKIGEGTYGVVYKAR-------NKLTGEVVALKKIRLD-TETEGVPSTAI 53
Query: 195 YEWQVYNTLGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHT-MSIEMVACIA 253
E + L + V + + Y +V + L L D + ++ T + + ++
Sbjct: 54 REISLLKELNHPNIVKLLDVIHTENKLY-LVFEFLSMDLKDFMDASALTGIPLPLIKSYL 112
Query: 254 IEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLA 299
+ + L HS +H D+KP+N L+ G + L D GLA
Sbjct: 113 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGA-----IKLADFGLA 153
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 34.7 bits (78), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 68/167 (40%), Gaps = 26/167 (15%)
Query: 141 YRLERKLGKGGFGQVYVG-RRVS------PVNANERTGPGAVEVALKFEHRSSKGCNYGP 193
Y ++ +GKG FGQV RV + N++ ++ ++ +K
Sbjct: 56 YEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKH----- 110
Query: 194 PYEWQVYNTLGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVW-NNNSHTMSIEMVACI 252
E + Y H + R H +V +ML +L+D+ N N +S+ +
Sbjct: 111 DTEMKYYIVHLKRHFMFRNHL--------CLVFEMLSYNLYDLLRNTNFRGVSLNLTRKF 162
Query: 253 AIEAISILEKMHSK--GYVHGDVKPENFLLGPPGTPDEKKLFLVDLG 297
A + + L + + +H D+KPEN LL P + +VD G
Sbjct: 163 AQQMCTALLFLATPELSIIHCDLKPENILL---CNPKRSAIKIVDFG 206
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 34.7 bits (78), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/109 (22%), Positives = 46/109 (42%), Gaps = 9/109 (8%)
Query: 224 MVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPP 283
+V + + L V + N + + + + + H +H D+KP+N L+
Sbjct: 96 LVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSD 155
Query: 284 GTPDEKKLFLVDLGLATKW----RDSTTGMHVEYDQRPDVFRGTVRYAS 328
G L L D GLA + R T + + + PDV G+ +Y++
Sbjct: 156 GA-----LKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYST 199
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 4/45 (8%)
Query: 255 EAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLA 299
E + L+ HS G +H DVKP N ++ + +KL L+D GLA
Sbjct: 138 EILKALDYCHSMGIMHRDVKPHNVMID----HEHRKLRLIDWGLA 178
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 4/45 (8%)
Query: 255 EAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLA 299
E + L+ HS G +H DVKP N ++ + +KL L+D GLA
Sbjct: 139 EILKALDYCHSMGIMHRDVKPHNVMID----HEHRKLRLIDWGLA 179
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 4/45 (8%)
Query: 255 EAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLA 299
E + L+ HS G +H DVKP N ++ + +KL L+D GLA
Sbjct: 144 EILKALDYCHSMGIMHRDVKPHNVMID----HEHRKLRLIDWGLA 184
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 44/108 (40%), Gaps = 13/108 (12%)
Query: 253 AIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVE 312
A E S L +HS V+ D+KPEN LL G + L D GL + ++E
Sbjct: 145 AAEIASALGYLHSLNIVYRDLKPENILLDSQG-----HIVLTDFGLCKE--------NIE 191
Query: 313 YDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPW 360
++ F GT Y + + R D L L +L G P+
Sbjct: 192 HNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPF 239
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 4/45 (8%)
Query: 255 EAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLA 299
E + L+ HS G +H DVKP N ++ + +KL L+D GLA
Sbjct: 137 EILKALDYCHSMGIMHRDVKPHNVMID----HEHRKLRLIDWGLA 177
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 90/225 (40%), Gaps = 28/225 (12%)
Query: 141 YRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPY--EWQ 198
YRL + +GKG F +V + R + TG EVA+K ++ E +
Sbjct: 14 YRLLKTIGKGNFAKVKLARHIL-------TGR---EVAIKIIDKTQLNPTSLQKLFREVR 63
Query: 199 VYNTLGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAIS 258
+ L + V + Y+++ G ++D + E + + +S
Sbjct: 64 IMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFR-QIVS 122
Query: 259 ILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYDQRPD 318
++ H K VH D+K EN LL + + + D G + ++ T G + D
Sbjct: 123 AVQYCHQKRIVHRDLKAENLLLDA-----DMNIKIADFGFSNEF---TVG------GKLD 168
Query: 319 VFRGTVRYASVHAHLGRTGSRRD-DLESLAYTLIFLLRGRLPWQG 362
F G+ YA+ G+ + D+ SL L L+ G LP+ G
Sbjct: 169 TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG 213
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 45/94 (47%), Gaps = 17/94 (18%)
Query: 224 MVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLL--- 280
+V+D++ L + ++ S +++E V + + L+ MHS +H D+KP N L+
Sbjct: 136 VVLDLMESDLHQIIHS-SQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNEN 194
Query: 281 ------------GPPGTPDEKKLFLVDLGLATKW 302
G +P E + F+ + +AT+W
Sbjct: 195 CELKIGDFGMARGLCTSPAEHQYFMTEY-VATRW 227
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 68/167 (40%), Gaps = 26/167 (15%)
Query: 141 YRLERKLGKGGFGQVYVG-RRVS------PVNANERTGPGAVEVALKFEHRSSKGCNYGP 193
Y ++ +GKG FGQV RV + N++ ++ ++ +K
Sbjct: 37 YEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKH----- 91
Query: 194 PYEWQVYNTLGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVW-NNNSHTMSIEMVACI 252
E + Y H + R H +V +ML +L+D+ N N +S+ +
Sbjct: 92 DTEMKYYIVHLKRHFMFRNHL--------CLVFEMLSYNLYDLLRNTNFRGVSLNLTRKF 143
Query: 253 AIEAISILEKMHSK--GYVHGDVKPENFLLGPPGTPDEKKLFLVDLG 297
A + + L + + +H D+KPEN LL P + +VD G
Sbjct: 144 AQQMCTALLFLATPELSIIHCDLKPENILL---CNPKRSAIKIVDFG 187
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 4/45 (8%)
Query: 255 EAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLA 299
E + L+ HS G +H DVKP N ++ + +KL L+D GLA
Sbjct: 139 EILKALDYCHSMGIMHRDVKPHNVMID----HEHRKLRLIDWGLA 179
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 68/167 (40%), Gaps = 26/167 (15%)
Query: 141 YRLERKLGKGGFGQVYVG-RRVS------PVNANERTGPGAVEVALKFEHRSSKGCNYGP 193
Y ++ +GKG FGQV RV + N++ ++ ++ +K
Sbjct: 56 YEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKH----- 110
Query: 194 PYEWQVYNTLGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVW-NNNSHTMSIEMVACI 252
E + Y H + R H +V +ML +L+D+ N N +S+ +
Sbjct: 111 DTEMKYYIVHLKRHFMFRNHL--------CLVFEMLSYNLYDLLRNTNFRGVSLNLTRKF 162
Query: 253 AIEAISILEKMHSK--GYVHGDVKPENFLLGPPGTPDEKKLFLVDLG 297
A + + L + + +H D+KPEN LL P + +VD G
Sbjct: 163 AQQMCTALLFLATPELSIIHCDLKPENILL---CNPKRXAIKIVDFG 206
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 101/266 (37%), Gaps = 54/266 (20%)
Query: 142 RLERKLGKGGFGQVYVG----------RRVSPVNANERTGPGAVEVALKFEHRSSKGCNY 191
RLE KLG+G FG+V++G + + P N + +V K H Y
Sbjct: 188 RLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSPEAFLQEAQVMKKLRHEKLVQL-Y 246
Query: 192 GPPYEWQVY-NTLGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVA 250
E +Y T S G KG G Y + P L ++M A
Sbjct: 247 AVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRL------PQL------------VDMAA 288
Query: 251 CIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMH 310
IA ++ +E+M+ YVH D++ N L+G + + D GL D+
Sbjct: 289 QIA-SGMAYVERMN---YVHRDLRAANILVG-----ENLVCKVADFGLGRLIEDN----- 334
Query: 311 VEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFL-LRGRLPWQGY------ 363
EY R + +++ + A L + + D+ S L L +GR+P+ G
Sbjct: 335 -EYTARQGA-KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL 392
Query: 364 -QGENKGFLVCKKKMATSPDGLCCFC 388
Q E + C + S L C C
Sbjct: 393 DQVERGYRMPCPPECPESLHDLMCQC 418
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 34.3 bits (77), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 49/111 (44%), Gaps = 17/111 (15%)
Query: 249 VACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTG 308
V+ I+ ++ L + H +H DVKP N L+ G ++ L D G++ + DS
Sbjct: 136 VSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRG-----EIKLCDFGVSGQLIDSMA- 187
Query: 309 MHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLP 359
+ F GT Y S G S + D+ S+ +L+ + GR P
Sbjct: 188 ---------NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 229
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 34.3 bits (77), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 89/225 (39%), Gaps = 28/225 (12%)
Query: 141 YRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPY--EWQ 198
YRL + +GKG F +V + R + TG EVA+K ++ E +
Sbjct: 17 YRLLKTIGKGNFAKVKLARHIL-------TGR---EVAIKIIDKTQLNPTSLQKLFREVR 66
Query: 199 VYNTLGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAIS 258
+ L + V + Y+++ G ++D + E + + +S
Sbjct: 67 IMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFR-QIVS 125
Query: 259 ILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYDQRPD 318
++ H K VH D+K EN LL + + + D G + ++ T G + D
Sbjct: 126 AVQYCHQKRIVHRDLKAENLLLDA-----DMNIKIADFGFSNEF---TVG------GKLD 171
Query: 319 VFRGTVRYASVHAHLGRTGSRRD-DLESLAYTLIFLLRGRLPWQG 362
F G YA+ G+ + D+ SL L L+ G LP+ G
Sbjct: 172 AFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG 216
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 34.3 bits (77), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 105/263 (39%), Gaps = 48/263 (18%)
Query: 142 RLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPP---YEWQ 198
RLE KLG+G FG+V++G T G VA+K + K P E Q
Sbjct: 18 RLEVKLGQGCFGEVWMG-----------TWNGTTRVAIK----TLKPGTMSPEAFLQEAQ 62
Query: 199 VYNTLGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHT-----MSIEMVACIA 253
V L V +++ + Y++ M SL D + ++M A IA
Sbjct: 63 VMKKLRHEKLV-QLYAVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIA 121
Query: 254 IEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEY 313
++ +E+M+ YVH D++ N L+G + + D GLA D+ EY
Sbjct: 122 -SGMAYVERMN---YVHRDLRAANILVG-----ENLVCKVADFGLARLIEDN------EY 166
Query: 314 DQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFL-LRGRLPWQGY-------QG 365
R + +++ + A L + + D+ S L L +GR+P+ G Q
Sbjct: 167 TARQGA-KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 225
Query: 366 ENKGFLVCKKKMATSPDGLCCFC 388
E + C + S L C C
Sbjct: 226 ERGYRMPCPPECPESLHDLMCQC 248
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 34.3 bits (77), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 49/111 (44%), Gaps = 17/111 (15%)
Query: 249 VACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTG 308
V+ I+ ++ L + H +H DVKP N L+ G ++ L D G++ + DS
Sbjct: 128 VSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRG-----EIKLCDFGVSGQLIDSMA- 179
Query: 309 MHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLP 359
+ F GT Y S G S + D+ S+ +L+ + GR P
Sbjct: 180 ---------NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 221
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 34.3 bits (77), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 20/31 (64%)
Query: 255 EAISILEKMHSKGYVHGDVKPENFLLGPPGT 285
+ I LE +HS+G VH D+KP N LL GT
Sbjct: 117 QLIDGLEYLHSQGIVHKDIKPGNLLLTTGGT 147
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 34.3 bits (77), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 4/45 (8%)
Query: 255 EAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLA 299
E + L+ HS+G +H DVKP N ++ + +KL L+D GLA
Sbjct: 134 ELLKALDYCHSQGIMHRDVKPHNVMID----HELRKLRLIDWGLA 174
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 34.3 bits (77), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 4/45 (8%)
Query: 255 EAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLA 299
E + L+ HS+G +H DVKP N ++ + +KL L+D GLA
Sbjct: 135 ELLKALDYCHSQGIMHRDVKPHNVMID----HELRKLRLIDWGLA 175
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 34.3 bits (77), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 70/172 (40%), Gaps = 25/172 (14%)
Query: 141 YRLERKLGKGGFGQVYVGR-RVSPVNANERTGPGAVEVALK-FEHRSSKGCNYG---PPY 195
+++ R LG G FG+V++ R R + + + V LK EH + + P+
Sbjct: 8 FQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPF 67
Query: 196 EWQVYNTLGGSHGVPRVHFKGRQGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAI 254
+++ T + + M+MD + G L+ + S + A
Sbjct: 68 IIRMWGTFQDAQQI-------------FMIMDYIEGGELFSLLRK-SQRFPNPVAKFYAA 113
Query: 255 EAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDST 306
E LE +HSK ++ D+KPEN LL G + + D G A D T
Sbjct: 114 EVCLALEYLHSKDIIYRDLKPENILLDKNG-----HIKITDFGFAKYVPDVT 160
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 34.3 bits (77), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 71/170 (41%), Gaps = 30/170 (17%)
Query: 136 GGSPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPY 195
G Y + RK+G+G + +V+ G VN NE+ ++ K + +
Sbjct: 28 GEQDDYEVVRKVGRGKYSEVFEG---INVNNNEKCIIKILKPVKKKKIKREIK------- 77
Query: 196 EWQVYNTLGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSH------TMSIEMV 249
+ N +GG + V + Q PSL + NN+ T++ +
Sbjct: 78 --ILQNLMGGPNIVKLLDIVRDQHSK--------TPSLIFEYVNNTDFKVLYPTLTDYDI 127
Query: 250 ACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLA 299
E + L+ HS+G +H DVKP N ++ + +KL L+D GLA
Sbjct: 128 RYYIYELLKALDYCHSQGIMHRDVKPHNVMID----HELRKLRLIDWGLA 173
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 34.3 bits (77), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 4/45 (8%)
Query: 255 EAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLA 299
E + L+ HS+G +H DVKP N ++ + +KL L+D GLA
Sbjct: 134 ELLKALDYCHSQGIMHRDVKPHNVMID----HELRKLRLIDWGLA 174
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 34.3 bits (77), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 4/45 (8%)
Query: 255 EAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLA 299
E + L+ HS+G +H DVKP N ++ + +KL L+D GLA
Sbjct: 154 ELLKALDYCHSQGIMHRDVKPHNVMID----HELRKLRLIDWGLA 194
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 34.3 bits (77), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 49/111 (44%), Gaps = 17/111 (15%)
Query: 249 VACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTG 308
V+ I+ ++ L + H +H DVKP N L+ G ++ L D G++ + DS
Sbjct: 109 VSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRG-----EIKLCDFGVSGQLIDSMA- 160
Query: 309 MHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLP 359
+ F GT Y S G S + D+ S+ +L+ + GR P
Sbjct: 161 ---------NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 4/45 (8%)
Query: 255 EAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLA 299
E + L+ HS+G +H DVKP N ++ + +KL L+D GLA
Sbjct: 133 ELLKALDYCHSQGIMHRDVKPHNVMID----HELRKLRLIDWGLA 173
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 45/94 (47%), Gaps = 17/94 (18%)
Query: 224 MVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLL--- 280
+V+D++ L + ++ S +++E V + + L+ MHS +H D+KP N L+
Sbjct: 137 VVLDLMESDLHQIIHS-SQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNEN 195
Query: 281 ------------GPPGTPDEKKLFLVDLGLATKW 302
G +P E + F+ + +AT+W
Sbjct: 196 CELKIGDFGMARGLCTSPAEHQYFMTEY-VATRW 228
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 49/111 (44%), Gaps = 17/111 (15%)
Query: 249 VACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTG 308
V+ I+ ++ L + H +H DVKP N L+ G ++ L D G++ + DS
Sbjct: 109 VSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRG-----EIKLCDFGVSGQLIDSMA- 160
Query: 309 MHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLP 359
+ F GT Y S G S + D+ S+ +L+ + GR P
Sbjct: 161 ---------NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 4/45 (8%)
Query: 255 EAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLA 299
E + L+ HS+G +H DVKP N ++ + +KL L+D GLA
Sbjct: 133 ELLKALDYCHSQGIMHRDVKPHNVMID----HELRKLRLIDWGLA 173
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 100/259 (38%), Gaps = 40/259 (15%)
Query: 142 RLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPP---YEWQ 198
RLE KLG+G FG+V++G T G VA+K + K P E Q
Sbjct: 12 RLEVKLGQGCFGEVWMG-----------TWNGTTRVAIK----TLKPGTMSPEAFLQEAQ 56
Query: 199 VYNTLGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNN-SHTMSIEMVACIAIEAI 257
V L V +++ + Y++ M SL D + + + +A +
Sbjct: 57 VMKKLRHEKLV-QLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIA 115
Query: 258 SILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYDQRP 317
S + + YVH D++ N L+G + + D GLA D+ EY R
Sbjct: 116 SGMAYVERMNYVHRDLRAANILVG-----ENLVCKVADFGLARLIEDN------EYTARQ 164
Query: 318 DVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFL-LRGRLPWQGY-------QGENKG 369
+ +++ + A L + + D+ S L L +GR+P+ G Q E
Sbjct: 165 GA-KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY 223
Query: 370 FLVCKKKMATSPDGLCCFC 388
+ C + S L C C
Sbjct: 224 RMPCPPECPESLHDLMCQC 242
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 4/45 (8%)
Query: 255 EAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLA 299
E + L+ HS+G +H DVKP N ++ + +KL L+D GLA
Sbjct: 133 ELLKALDYCHSQGIMHRDVKPHNVMID----HELRKLRLIDWGLA 173
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 49/111 (44%), Gaps = 17/111 (15%)
Query: 249 VACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTG 308
V+ I+ ++ L + H +H DVKP N L+ G ++ L D G++ + DS
Sbjct: 109 VSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRG-----EIKLCDFGVSGQLIDSMA- 160
Query: 309 MHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLP 359
+ F GT Y S G S + D+ S+ +L+ + GR P
Sbjct: 161 ---------NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 4/45 (8%)
Query: 255 EAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLA 299
E + L+ HS+G +H DVKP N ++ + +KL L+D GLA
Sbjct: 133 ELLKALDYCHSQGIMHRDVKPHNVMID----HELRKLRLIDWGLA 173
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 49/111 (44%), Gaps = 17/111 (15%)
Query: 249 VACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTG 308
V+ I+ ++ L + H +H DVKP N L+ G ++ L D G++ + DS
Sbjct: 109 VSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRG-----EIKLCDFGVSGQLIDSMA- 160
Query: 309 MHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLP 359
+ F GT Y S G S + D+ S+ +L+ + GR P
Sbjct: 161 ---------NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 49/111 (44%), Gaps = 17/111 (15%)
Query: 249 VACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTG 308
V+ I+ ++ L + H +H DVKP N L+ G ++ L D G++ + DS
Sbjct: 109 VSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRG-----EIKLCDFGVSGQLIDSMA- 160
Query: 309 MHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLP 359
+ F GT Y S G S + D+ S+ +L+ + GR P
Sbjct: 161 ---------NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 5/64 (7%)
Query: 220 DYYVMVMDMLGPSLWD--VWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPEN 277
DYY+++ M G L+D V N + ++ + A+ L H G +H D+KPEN
Sbjct: 88 DYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYL---HENGIIHRDLKPEN 144
Query: 278 FLLG 281
LL
Sbjct: 145 VLLS 148
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 5/64 (7%)
Query: 220 DYYVMVMDMLGPSLWD--VWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPEN 277
DYY+++ M G L+D V N + ++ + A+ L H G +H D+KPEN
Sbjct: 87 DYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYL---HENGIIHRDLKPEN 143
Query: 278 FLLG 281
LL
Sbjct: 144 VLLS 147
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 100/259 (38%), Gaps = 40/259 (15%)
Query: 142 RLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPP---YEWQ 198
RLE KLG+G FG+V++G T G VA+K + K P E Q
Sbjct: 10 RLEVKLGQGCFGEVWMG-----------TWNGTTRVAIK----TLKPGTMSPEAFLQEAQ 54
Query: 199 VYNTLGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNN-SHTMSIEMVACIAIEAI 257
V L V +++ + Y++ M SL D + + + +A +
Sbjct: 55 VMKKLRHEKLV-QLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIA 113
Query: 258 SILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYDQRP 317
S + + YVH D++ N L+G + + D GLA D+ EY R
Sbjct: 114 SGMAYVERMNYVHRDLRAANILVG-----ENLVCKVADFGLARLIEDN------EYTARQ 162
Query: 318 DVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFL-LRGRLPWQGY-------QGENKG 369
+ +++ + A L + + D+ S L L +GR+P+ G Q E
Sbjct: 163 GA-KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY 221
Query: 370 FLVCKKKMATSPDGLCCFC 388
+ C + S L C C
Sbjct: 222 RMPCPPECPESLHDLMCQC 240
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 33.9 bits (76), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 4/45 (8%)
Query: 255 EAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLA 299
E + L+ HS+G +H DVKP N ++ + +KL L+D GLA
Sbjct: 133 ELLKALDYCHSQGIMHRDVKPHNVMID----HELRKLRLIDWGLA 173
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 33.9 bits (76), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 77/204 (37%), Gaps = 23/204 (11%)
Query: 108 SGGPSNDKANAGGEDEGSTAPLPEKIAVGGSPMYRLERKLGKGGFGQVYVGRRVSPVNAN 167
S ++D A E++ T P + + L R +G+G FG V+ G +SP N
Sbjct: 360 SVSETDDYAEIIDEEDTYTMPSTRDYEIQRERI-ELGRCIGEGQFGDVHQGIYMSPENP- 417
Query: 168 ERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNTL-----GGSHGVPRVHFKGRQGDYY 222
A+ VA+K + K C E + L H V + +
Sbjct: 418 ------AMAVAIK----TCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWI 467
Query: 223 VMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGP 282
+M + LG L ++ + + A + + L + SK +VH D+ N L+
Sbjct: 468 IMELCTLG-ELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSS 526
Query: 283 PGTPDEKKLFLVDLGLATKWRDST 306
+ L D GL+ DST
Sbjct: 527 NDC-----VKLGDFGLSRYMEDST 545
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 33.9 bits (76), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 5/64 (7%)
Query: 220 DYYVMVMDMLGPSLWD--VWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPEN 277
DYY+++ M G L+D V N + ++ + A+ L H G +H D+KPEN
Sbjct: 88 DYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYL---HENGIIHRDLKPEN 144
Query: 278 FLLG 281
LL
Sbjct: 145 VLLS 148
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 33.9 bits (76), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 5/64 (7%)
Query: 220 DYYVMVMDMLGPSLWD--VWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPEN 277
DYY+++ M G L+D V N + ++ + A+ L H G +H D+KPEN
Sbjct: 88 DYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYL---HENGIIHRDLKPEN 144
Query: 278 FLLG 281
LL
Sbjct: 145 VLLS 148
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 33.9 bits (76), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 104/263 (39%), Gaps = 48/263 (18%)
Query: 142 RLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPP---YEWQ 198
RLE KLG+G FG+V++G T G VA+K + K P E Q
Sbjct: 21 RLEVKLGQGCFGEVWMG-----------TWNGTTRVAIK----TLKPGTMSPEAFLQEAQ 65
Query: 199 VYNTLGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNN-----SHTMSIEMVACIA 253
V L V +++ + Y++ M SL D ++M A IA
Sbjct: 66 VMKKLRHEKLV-QLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIA 124
Query: 254 IEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEY 313
++ +E+M+ YVH D++ N L+G + + D GLA D+ EY
Sbjct: 125 -SGMAYVERMN---YVHRDLRAANILVG-----ENLVCKVADFGLARLIEDN------EY 169
Query: 314 DQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFL-LRGRLPWQGY-------QG 365
R + +++ + A L + + D+ S L L +GR+P+ G Q
Sbjct: 170 TARQGA-KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 228
Query: 366 ENKGFLVCKKKMATSPDGLCCFC 388
E + C + S L C C
Sbjct: 229 ERGYRMPCPPECPESLHDLMCQC 251
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 33.9 bits (76), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 5/64 (7%)
Query: 220 DYYVMVMDMLGPSLWD--VWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPEN 277
DYY+++ M G L+D V N + ++ + A+ L H G +H D+KPEN
Sbjct: 94 DYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYL---HENGIIHRDLKPEN 150
Query: 278 FLLG 281
LL
Sbjct: 151 VLLS 154
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 33.9 bits (76), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 81/206 (39%), Gaps = 23/206 (11%)
Query: 230 GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEK 289
G SL+ + + + IA + ++ +H+K +H D+K N L T
Sbjct: 115 GSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLT---- 170
Query: 290 KLFLVDLGLAT---KWRDSTTGMHVEYDQRPDVFRGTVRYAS---VHAHLGRTGSRRDDL 343
+ + D GLAT +W S Q+ + G+V + + + S + D+
Sbjct: 171 -VKIGDFGLATVKSRWSGS---------QQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDV 220
Query: 344 ESLAYTLIFLLRGRLPWQGYQGENKGFLVCKKKMATSPD--GLCCFCPAPFRQFVEYVVN 401
S L L+ G LP+ ++ + + A SPD L CP ++ V V
Sbjct: 221 YSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYA-SPDLSKLYKNCPKAMKRLVADCVK 279
Query: 402 LKFDEEPNYAKYISLFDGIVGPNPDI 427
+E P + + +S + + P I
Sbjct: 280 KVKEERPLFPQILSSIELLQHSLPKI 305
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 33.9 bits (76), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 5/64 (7%)
Query: 220 DYYVMVMDMLGPSLWD--VWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPEN 277
DYY+++ M G L+D V N + ++ + A+ L H G +H D+KPEN
Sbjct: 213 DYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYL---HENGIIHRDLKPEN 269
Query: 278 FLLG 281
LL
Sbjct: 270 VLLS 273
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 33.5 bits (75), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 62/306 (20%), Positives = 120/306 (39%), Gaps = 39/306 (12%)
Query: 146 KLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNTLGG 205
+LG G FG+VY + N+ TG A+ A E +S + E ++ T
Sbjct: 26 ELGDGAFGKVYKAK-------NKETG--ALAAAKVIETKSEEELE-DYIVEIEILATCDH 75
Query: 206 SHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHS 265
+ V + G ++M+ G ++ + ++ + + + + L +HS
Sbjct: 76 PYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHS 135
Query: 266 KGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVR 325
K +H D+K N L+ G + L D G++ K +++ Q+ D F GT
Sbjct: 136 KRIIHRDLKAGNVLMTLEG-----DIRLADFGVSAK--------NLKTLQKRDSFIGTPY 182
Query: 326 YASVHAHLGRTGSR-----RDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCKKKMATS 380
+ + + T + D+ SL TLI + + P E V K +
Sbjct: 183 WMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPP----HHELNPMRVLLKIAKSD 238
Query: 381 PDGLCCFCPA----PFRQFVEYVVNLKFDEEPNYAKYISL-FDGIVGPNPDIRPISTEGA 435
P L P+ FR F++ ++ + P+ A+ + F + N +R + E
Sbjct: 239 PPTL--LTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEHPFVSSITSNKALRELVAEAK 296
Query: 436 QKLIYQ 441
+++ +
Sbjct: 297 AEVMEE 302
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 5/64 (7%)
Query: 220 DYYVMVMDMLGPSLWD--VWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPEN 277
DYY+++ M G L+D V N + ++ + A+ L H G +H D+KPEN
Sbjct: 227 DYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYL---HENGIIHRDLKPEN 283
Query: 278 FLLG 281
LL
Sbjct: 284 VLLS 287
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 33.5 bits (75), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 68/169 (40%), Gaps = 22/169 (13%)
Query: 143 LERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNT 202
L R +G+G FG V+ G +SP N A+ VA+K + K C E +
Sbjct: 11 LGRCIGEGQFGDVHQGIYMSPENP-------ALAVAIK----TCKNCTSDSVREKFLQEA 59
Query: 203 L-----GGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAI 257
L H V + + +M + LG L +++ + + A +
Sbjct: 60 LTMRQFDHPHIVKLIGVITENPVWIIMELCTLG-ELRSFLQVRKYSLDLASLILYAYQLS 118
Query: 258 SILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDST 306
+ L + SK +VH D+ N L+ + D KL D GL+ DST
Sbjct: 119 TALAYLESKRFVHRDIAARNVLV---SSNDCVKLG--DFGLSRYMEDST 162
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 33.5 bits (75), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 100/259 (38%), Gaps = 40/259 (15%)
Query: 142 RLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPP---YEWQ 198
RLE KLG+G FG+V++G T G VA+K + K P E Q
Sbjct: 21 RLEVKLGQGCFGEVWMG-----------TWNGTTRVAIK----TLKPGTMSPEAFLQEAQ 65
Query: 199 VYNTLGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNN-SHTMSIEMVACIAIEAI 257
V L V +++ + Y++ M SL D + + + +A +
Sbjct: 66 VMKKLRHEKLV-QLYAVVSEEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIA 124
Query: 258 SILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYDQRP 317
S + + YVH D++ N L+G + + D GLA D+ EY R
Sbjct: 125 SGMAYVERMNYVHRDLRAANILVG-----ENLVCKVADFGLARLIEDN------EYTARQ 173
Query: 318 DVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFL-LRGRLPWQGY-------QGENKG 369
+ +++ + A L + + D+ S L L +GR+P+ G Q E
Sbjct: 174 GA-KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY 232
Query: 370 FLVCKKKMATSPDGLCCFC 388
+ C + S L C C
Sbjct: 233 RMPCPPECPESLHDLMCQC 251
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 33.5 bits (75), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 68/169 (40%), Gaps = 22/169 (13%)
Query: 143 LERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNT 202
L R +G+G FG V+ G +SP N A+ VA+K + K C E +
Sbjct: 16 LGRCIGEGQFGDVHQGIYMSPENP-------ALAVAIK----TCKNCTSDSVREKFLQEA 64
Query: 203 L-----GGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAI 257
L H V + + +M + LG L +++ + + A +
Sbjct: 65 LTMRQFDHPHIVKLIGVITENPVWIIMELCTLG-ELRSFLQVRKYSLDLASLILYAYQLS 123
Query: 258 SILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDST 306
+ L + SK +VH D+ N L+ + D KL D GL+ DST
Sbjct: 124 TALAYLESKRFVHRDIAARNVLV---SSNDCVKLG--DFGLSRYMEDST 167
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 32/145 (22%), Positives = 59/145 (40%), Gaps = 10/145 (6%)
Query: 141 YRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSK-GCNYGPPYEWQV 199
+ + R LGKG FG VY+ R E+ + + + F+ + K G + E ++
Sbjct: 16 FDIVRPLGKGKFGNVYLAR--------EKQNKFIMALKVLFKSQLEKEGVEHQLRREIEI 67
Query: 200 YNTLGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISI 259
+ L + + ++ + Y+M+ L+ + + A E
Sbjct: 68 QSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHG-RFDEQRSATFMEELADA 126
Query: 260 LEKMHSKGYVHGDVKPENFLLGPPG 284
L H + +H D+KPEN L+G G
Sbjct: 127 LHYCHERKVIHRDIKPENLLMGYKG 151
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 68/169 (40%), Gaps = 22/169 (13%)
Query: 143 LERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNT 202
L R +G+G FG V+ G +SP N A+ VA+K + K C E +
Sbjct: 14 LGRCIGEGQFGDVHQGIYMSPENP-------ALAVAIK----TCKNCTSDSVREKFLQEA 62
Query: 203 L-----GGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAI 257
L H V + + +M + LG L +++ + + A +
Sbjct: 63 LTMRQFDHPHIVKLIGVITENPVWIIMELCTLG-ELRSFLQVRKYSLDLASLILYAYQLS 121
Query: 258 SILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDST 306
+ L + SK +VH D+ N L+ + D KL D GL+ DST
Sbjct: 122 TALAYLESKRFVHRDIAARNVLV---SSNDCVKLG--DFGLSRYMEDST 165
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 68/169 (40%), Gaps = 22/169 (13%)
Query: 143 LERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNT 202
L R +G+G FG V+ G +SP N A+ VA+K + K C E +
Sbjct: 42 LGRCIGEGQFGDVHQGIYMSPENP-------ALAVAIK----TCKNCTSDSVREKFLQEA 90
Query: 203 L-----GGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAI 257
L H V + + +M + LG L +++ + + A +
Sbjct: 91 LTMRQFDHPHIVKLIGVITENPVWIIMELCTLG-ELRSFLQVRKYSLDLASLILYAYQLS 149
Query: 258 SILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDST 306
+ L + SK +VH D+ N L+ + D KL D GL+ DST
Sbjct: 150 TALAYLESKRFVHRDIAARNVLV---SSNDCVKLG--DFGLSRYMEDST 193
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 68/169 (40%), Gaps = 22/169 (13%)
Query: 143 LERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNT 202
L R +G+G FG V+ G +SP N A+ VA+K + K C E +
Sbjct: 17 LGRCIGEGQFGDVHQGIYMSPENP-------ALAVAIK----TCKNCTSDSVREKFLQEA 65
Query: 203 L-----GGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAI 257
L H V + + +M + LG L +++ + + A +
Sbjct: 66 LTMRQFDHPHIVKLIGVITENPVWIIMELCTLG-ELRSFLQVRKYSLDLASLILYAYQLS 124
Query: 258 SILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDST 306
+ L + SK +VH D+ N L+ + D KL D GL+ DST
Sbjct: 125 TALAYLESKRFVHRDIAARNVLV---SSNDCVKLG--DFGLSRYMEDST 168
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 26/46 (56%), Gaps = 5/46 (10%)
Query: 254 IEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLA 299
+EA++ L H G VH D+KPEN L P PD L + D GL+
Sbjct: 158 LEAVAYL---HENGIVHRDLKPENLLYATPA-PD-APLKIADFGLS 198
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 33.5 bits (75), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 76/195 (38%), Gaps = 28/195 (14%)
Query: 172 PGAVEVALKFEHRSSKGCNYGPPYEWQVYNTLGGSHGVPRVHFKGRQGDYY------VMV 225
P + +A K H K P Q+ L H + G G +Y + +
Sbjct: 39 PSGLIMARKLIHLEIK-----PAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM 93
Query: 226 MDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYV-HGDVKPENFLLGPPG 284
M G SL V + + E++ ++I + L + K + H DVKP N L+ G
Sbjct: 94 EHMDGGSLDQVLKE-AKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRG 152
Query: 285 TPDEKKLFLVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLE 344
++ L D G++ + DS + F GT Y + G S + D+
Sbjct: 153 -----EIKLCDFGVSGQLIDSMA----------NSFVGTRSYMAPERLQGTHYSVQSDIW 197
Query: 345 SLAYTLIFLLRGRLP 359
S+ +L+ L GR P
Sbjct: 198 SMGLSLVELAVGRYP 212
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 33.5 bits (75), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 58/140 (41%), Gaps = 14/140 (10%)
Query: 141 YRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSK-GCNYGPPYEWQV 199
+ + R LGKG FG VY+ R E+ V + + F+ + K G + E ++
Sbjct: 25 FEIGRPLGKGKFGNVYLAR--------EKKSHFIVALKVLFKSQIEKEGVEHQLRREIEI 76
Query: 200 YNTLGGSHGVPRVH--FKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAI 257
L + R++ F R+ Y ++ G ++ S T + A I E
Sbjct: 77 QAHLHHP-NILRLYNYFYDRRRIYLILEYAPRGELYKEL--QKSCTFDEQRTATIMEELA 133
Query: 258 SILEKMHSKGYVHGDVKPEN 277
L H K +H D+KPEN
Sbjct: 134 DALMYCHGKKVIHRDIKPEN 153
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 33.5 bits (75), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 57/141 (40%), Gaps = 10/141 (7%)
Query: 145 RKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSK-GCNYGPPYEWQVYNTL 203
R LGKG FG VY+ R E+ + + + F+ + K G + E ++ + L
Sbjct: 21 RPLGKGKFGNVYLAR--------EKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHL 72
Query: 204 GGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKM 263
+ + ++ + Y+M+ L+ + + A E L
Sbjct: 73 RHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHG-RFDEQRSATFMEELADALHYC 131
Query: 264 HSKGYVHGDVKPENFLLGPPG 284
H + +H D+KPEN L+G G
Sbjct: 132 HERKVIHRDIKPENLLMGYKG 152
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 33.5 bits (75), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 68/169 (40%), Gaps = 22/169 (13%)
Query: 143 LERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNT 202
L R +G+G FG V+ G +SP N A+ VA+K + K C E +
Sbjct: 19 LGRCIGEGQFGDVHQGIYMSPENP-------ALAVAIK----TCKNCTSDSVREKFLQEA 67
Query: 203 L-----GGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAI 257
L H V + + +M + LG L +++ + + A +
Sbjct: 68 LTMRQFDHPHIVKLIGVITENPVWIIMELCTLG-ELRSFLQVRKYSLDLASLILYAYQLS 126
Query: 258 SILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDST 306
+ L + SK +VH D+ N L+ + D KL D GL+ DST
Sbjct: 127 TALAYLESKRFVHRDIAARNVLV---SSNDCVKLG--DFGLSRYMEDST 170
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 33.5 bits (75), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 57/141 (40%), Gaps = 10/141 (7%)
Query: 145 RKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSK-GCNYGPPYEWQVYNTL 203
R LGKG FG VY+ R E+ + + + F+ + K G + E ++ + L
Sbjct: 20 RPLGKGKFGNVYLAR--------EKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHL 71
Query: 204 GGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKM 263
+ + ++ + Y+M+ L+ + + A E L
Sbjct: 72 RHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHG-RFDEQRSATFMEELADALHYC 130
Query: 264 HSKGYVHGDVKPENFLLGPPG 284
H + +H D+KPEN L+G G
Sbjct: 131 HERKVIHRDIKPENLLMGYKG 151
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 33.5 bits (75), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 105/263 (39%), Gaps = 48/263 (18%)
Query: 142 RLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPP---YEWQ 198
RLE KLG+G FG+V++G T G VA+K + K P E Q
Sbjct: 187 RLEVKLGQGCFGEVWMG-----------TWNGTTRVAIK----TLKPGTMSPEAFLQEAQ 231
Query: 199 VYNTLGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHT-----MSIEMVACIA 253
V L V +++ + Y++ M SL D + ++M A IA
Sbjct: 232 VMKKLRHEKLV-QLYAVVSEEPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIA 290
Query: 254 IEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEY 313
++ +E+M+ YVH D++ N L+G + + D GLA D+ EY
Sbjct: 291 -SGMAYVERMN---YVHRDLRAANILVG-----ENLVCKVADFGLARLIEDN------EY 335
Query: 314 DQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFL-LRGRLPWQGY-------QG 365
R + +++ + A L + + D+ S L L +GR+P+ G Q
Sbjct: 336 TARQGA-KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 394
Query: 366 ENKGFLVCKKKMATSPDGLCCFC 388
E + C + S L C C
Sbjct: 395 ERGYRMPCPPECPESLHDLMCQC 417
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 33.5 bits (75), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 41/190 (21%), Positives = 76/190 (40%), Gaps = 25/190 (13%)
Query: 146 KLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNTLGG 205
K+G+G +G VY A G ++ E + +G E + L
Sbjct: 9 KIGEGTYGVVY--------KAQNNYGETFALKKIRLE-KEDEGIPSTTIREISILKELKH 59
Query: 206 SHGVPR---VHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEK 262
S+ V +H K R V+V + L L + + + ++ ++ +
Sbjct: 60 SNIVKLYDVIHTKKR----LVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAY 115
Query: 263 MHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKW----RDSTTGMHVEYDQRPD 318
H + +H D+KP+N L+ G +L + D GLA + R T + + + PD
Sbjct: 116 CHDRRVLHRDLKPQNLLINREG-----ELKIADFGLARAFGIPVRKYTHEIVTLWYRAPD 170
Query: 319 VFRGTVRYAS 328
V G+ +Y++
Sbjct: 171 VLMGSKKYST 180
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 33.5 bits (75), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 63/305 (20%), Positives = 121/305 (39%), Gaps = 41/305 (13%)
Query: 146 KLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGC-NYGPPYEWQVYNTLG 204
+LG G FG+VY + N+ TG A+ A E +S + +Y E ++ T
Sbjct: 18 ELGDGAFGKVYKAK-------NKETG--ALAAAKVIETKSEEELEDYI--VEIEILATCD 66
Query: 205 GSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMH 264
+ V + G ++M+ G ++ + ++ + + + + L +H
Sbjct: 67 HPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLH 126
Query: 265 SKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYDQRPDVFRGTV 324
SK +H D+K N L+ G + L D G++ K +++ Q+ D F GT
Sbjct: 127 SKRIIHRDLKAGNVLMTLEG-----DIRLADFGVSAK--------NLKTLQKRDSFIGTP 173
Query: 325 RYASVHAHLGRTGSR-----RDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCKKKMAT 379
+ + + T + D+ SL TLI + + P E V K +
Sbjct: 174 YWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPP----HHELNPMRVLLKIAKS 229
Query: 380 SPDGLCCFCPA----PFRQFVEYVVNLKFDEEPNYAKYISL-FDGIVGPNPDIRPISTEG 434
P L P+ FR F++ ++ + P+ A+ + F + N +R + E
Sbjct: 230 DPPTL--LTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEHPFVSSITSNKALRELVAEA 287
Query: 435 AQKLI 439
+++
Sbjct: 288 KAEVM 292
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 33.5 bits (75), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 68/169 (40%), Gaps = 22/169 (13%)
Query: 143 LERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNT 202
L R +G+G FG V+ G +SP N A+ VA+K + K C E +
Sbjct: 14 LGRCIGEGQFGDVHQGIYMSPENP-------AMAVAIK----TCKNCTSDSVREKFLQEA 62
Query: 203 L-----GGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAI 257
L H V + + +M + LG L +++ + + A +
Sbjct: 63 LTMRQFDHPHIVKLIGVITENPVWIIMELCTLG-ELRSFLQVRKYSLDLASLILYAYQLS 121
Query: 258 SILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDST 306
+ L + SK +VH D+ N L+ + D KL D GL+ DST
Sbjct: 122 TALAYLESKRFVHRDIAARNVLV---SSNDCVKLG--DFGLSRYMEDST 165
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 33.1 bits (74), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 46/109 (42%), Gaps = 14/109 (12%)
Query: 253 AIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVE 312
A E LE +H + V+ D+KPEN LL D + + DLGLA +HV
Sbjct: 292 AAEICCGLEDLHRERIVYRDLKPENILLD-----DHGHIRISDLGLA---------VHVP 337
Query: 313 YDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQ 361
Q GTV Y + + D +L L ++ G+ P+Q
Sbjct: 338 EGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQ 386
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 33.1 bits (74), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 46/109 (42%), Gaps = 14/109 (12%)
Query: 253 AIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVE 312
A E LE +H + V+ D+KPEN LL D + + DLGLA +HV
Sbjct: 292 AAEICCGLEDLHRERIVYRDLKPENILLD-----DHGHIRISDLGLA---------VHVP 337
Query: 313 YDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQ 361
Q GTV Y + + D +L L ++ G+ P+Q
Sbjct: 338 EGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQ 386
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 33.1 bits (74), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 67/166 (40%), Gaps = 15/166 (9%)
Query: 135 VGGSPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPP 194
+G ++ K+G+G +G VY R N+ TG ++ + ++G
Sbjct: 2 LGSMENFQKVEKIGEGTYGVVYKAR-------NKLTGEVVALKKIRLD-TETEGVPSTAI 53
Query: 195 YEWQVYNTLGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHT-MSIEMVACIA 253
E + L + V + + Y +V + L L + ++ T + + ++
Sbjct: 54 REISLLKELNHPNIVKLLDVIHTENKLY-LVFEFLSMDLKKFMDASALTGIPLPLIKSYL 112
Query: 254 IEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLA 299
+ + L HS +H D+KPEN L+ G + L D GLA
Sbjct: 113 FQLLQGLAFCHSHRVLHRDLKPENLLINTEGA-----IKLADFGLA 153
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 33.1 bits (74), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 41/190 (21%), Positives = 76/190 (40%), Gaps = 25/190 (13%)
Query: 146 KLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNTLGG 205
K+G+G +G VY A G ++ E + +G E + L
Sbjct: 9 KIGEGTYGVVY--------KAQNNYGETFALKKIRLE-KEDEGIPSTTIREISILKELKH 59
Query: 206 SHGVPR---VHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEK 262
S+ V +H K R V+V + L L + + + ++ ++ +
Sbjct: 60 SNIVKLYDVIHTKKR----LVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAY 115
Query: 263 MHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKW----RDSTTGMHVEYDQRPD 318
H + +H D+KP+N L+ G +L + D GLA + R T + + + PD
Sbjct: 116 CHDRRVLHRDLKPQNLLINREG-----ELKIADFGLARAFGIPVRKYTHEVVTLWYRAPD 170
Query: 319 VFRGTVRYAS 328
V G+ +Y++
Sbjct: 171 VLMGSKKYST 180
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 33.1 bits (74), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 3/45 (6%)
Query: 260 LEKMHSKGYVHGDVKPENFL-LGPPGTPDEKKLFLVDLGLATKWR 303
+E +HS+G VH D+KP N L + G P+ L + D G A + R
Sbjct: 134 VEYLHSQGVVHRDLKPSNILYVDESGNPE--CLRICDFGFAKQLR 176
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 33.1 bits (74), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 41/190 (21%), Positives = 76/190 (40%), Gaps = 25/190 (13%)
Query: 146 KLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNTLGG 205
K+G+G +G VY A G ++ E + +G E + L
Sbjct: 9 KIGEGTYGVVY--------KAQNNYGETFALKKIRLE-KEDEGIPSTTIREISILKELKH 59
Query: 206 SHGVPR---VHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEK 262
S+ V +H K R V+V + L L + + + ++ ++ +
Sbjct: 60 SNIVKLYDVIHTKKR----LVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAY 115
Query: 263 MHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKW----RDSTTGMHVEYDQRPD 318
H + +H D+KP+N L+ G +L + D GLA + R T + + + PD
Sbjct: 116 CHDRRVLHRDLKPQNLLINREG-----ELKIADFGLARAFGIPVRKYTHEVVTLWYRAPD 170
Query: 319 VFRGTVRYAS 328
V G+ +Y++
Sbjct: 171 VLMGSKKYST 180
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 33.1 bits (74), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 56/159 (35%), Gaps = 46/159 (28%)
Query: 145 RKLGKGGFGQVYVGRRV-------------SPVNANERTGPGAVEVAL--KFEHRSS--- 186
R++G G FG VY R V S +NE+ EV K H ++
Sbjct: 21 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQY 80
Query: 187 KGCNYGPPYEWQVYN-TLGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMS 245
+GC W V LG + + VH K Q
Sbjct: 81 RGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQ--------------------------E 114
Query: 246 IEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPG 284
+E +A + A+ L +HS +H DVK N LL PG
Sbjct: 115 VE-IAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPG 152
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 33.1 bits (74), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 66/162 (40%), Gaps = 13/162 (8%)
Query: 141 YRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVY 200
Y+L +LGKG F V RR V A + + K R + E ++
Sbjct: 13 YQLFEELGKGAFSVV---RRCVKVLAGQEYAAMIINTK-KLSARDHQKLER----EARIC 64
Query: 201 NTLGGSHGVPRVHFKGRQGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISI 259
L + V R+H + ++ ++ D++ G L++ + + CI + +
Sbjct: 65 RLLKHPNIV-RLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQ-QILEA 122
Query: 260 LEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATK 301
+ H G VH ++KPEN LL K L D GLA +
Sbjct: 123 VLHCHQMGVVHRNLKPENLLLASKLKGAAVK--LADFGLAIE 162
>pdb|3ENH|A Chain A, Crystal Structure Of Cgi121BUD32KAE1 COMPLEX
pdb|3ENH|B Chain B, Crystal Structure Of Cgi121BUD32KAE1 COMPLEX
pdb|3EN9|A Chain A, Structure Of The Methanococcus Jannaschii Kae1-Bud32
Fusion Protein
pdb|3EN9|B Chain B, Structure Of The Methanococcus Jannaschii Kae1-Bud32
Fusion Protein
Length = 540
Score = 33.1 bits (74), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 41/96 (42%), Gaps = 20/96 (20%)
Query: 216 GRQGDYYVMVMD--MLGPSLWDVWNNNSHTMS-----------IEMVACIAIEAISILEK 262
R+ Y +V D + P ++DV +N M IE IA + I+ K
Sbjct: 387 AREARYLALVKDFGIPAPYIFDVDLDNKRIMMSYINGKLAKDVIEDNLDIAYKIGEIVGK 446
Query: 263 MHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGL 298
+H +H D+ NF+ +K L+++D GL
Sbjct: 447 LHKNDVIHNDLTTSNFIF-------DKDLYIIDFGL 475
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 33.1 bits (74), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 63/155 (40%), Gaps = 15/155 (9%)
Query: 146 KLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNTLGG 205
K+G+G +G VY R N+ TG ++ + ++G E + L
Sbjct: 11 KIGEGTYGVVYKAR-------NKLTGEVVALKKIRLD-TETEGVPSTAIREISLLKELNH 62
Query: 206 SHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHT-MSIEMVACIAIEAISILEKMH 264
+ V + + Y +V + L L + ++ T + + ++ + + L H
Sbjct: 63 PNIVKLLDVIHTENKLY-LVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 121
Query: 265 SKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLA 299
S +H D+KPEN L+ G + L D GLA
Sbjct: 122 SHRVLHRDLKPENLLINTEGA-----IKLADFGLA 151
>pdb|2VWB|A Chain A, Structure Of The Archaeal Kae1-Bud32 Fusion Protein
Mj1130: A Model For The Eukaryotic Ekc-Keops Subcomplex
Involved In Transcription And Telomere Homeostasis.
pdb|2VWB|B Chain B, Structure Of The Archaeal Kae1-Bud32 Fusion Protein
Mj1130: A Model For The Eukaryotic Ekc-Keops Subcomplex
Involved In Transcription And Telomere Homeostasis
Length = 535
Score = 33.1 bits (74), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 41/96 (42%), Gaps = 20/96 (20%)
Query: 216 GRQGDYYVMVMD--MLGPSLWDVWNNNSHTMS-----------IEMVACIAIEAISILEK 262
R+ Y +V D + P ++DV +N M IE IA + I+ K
Sbjct: 382 AREARYLALVKDFGIPAPYIFDVDLDNKRIMMSYINGKLAKDVIEDNLDIAYKIGEIVGK 441
Query: 263 MHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGL 298
+H +H D+ NF+ +K L+++D GL
Sbjct: 442 LHKNDVIHNDLTTSNFIF-------DKDLYIIDFGL 470
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 33.1 bits (74), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 3/45 (6%)
Query: 260 LEKMHSKGYVHGDVKPENFL-LGPPGTPDEKKLFLVDLGLATKWR 303
+E +HS+G VH D+KP N L + G P+ L + D G A + R
Sbjct: 134 VEYLHSQGVVHRDLKPSNILYVDESGNPE--CLRICDFGFAKQLR 176
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 33.1 bits (74), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 27/125 (21%), Positives = 53/125 (42%), Gaps = 9/125 (7%)
Query: 208 GVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKG 267
+ R+H +V + L +++ + + E+V + + L HS+
Sbjct: 62 NIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRN 121
Query: 268 YVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKW----RDSTTGMHVEYDQRPDVFRGT 323
+H D+KP+N L+ G +L L + GLA + R + + + + PDV G
Sbjct: 122 VLHRDLKPQNLLINRNG-----ELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGA 176
Query: 324 VRYAS 328
Y++
Sbjct: 177 KLYST 181
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 32.7 bits (73), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 63/155 (40%), Gaps = 15/155 (9%)
Query: 146 KLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNTLGG 205
K+G+G +G VY R N+ TG ++ + ++G E + L
Sbjct: 11 KIGEGTYGVVYKAR-------NKLTGEVVALKKIRLD-TETEGVPSTAIREISLLKELNH 62
Query: 206 SHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHT-MSIEMVACIAIEAISILEKMH 264
+ V + + Y +V + L L + ++ T + + ++ + + L H
Sbjct: 63 PNIVKLLDVIHTENKLY-LVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 121
Query: 265 SKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLA 299
S +H D+KPEN L+ G + L D GLA
Sbjct: 122 SHRVLHRDLKPENLLINTEGA-----IKLADFGLA 151
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 32.7 bits (73), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 49/111 (44%), Gaps = 17/111 (15%)
Query: 249 VACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTG 308
V+ I+ ++ L + H +H DVKP N L+ G ++ L D G++ +
Sbjct: 112 VSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRG-----EIKLCDFGVSGQL------ 158
Query: 309 MHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLP 359
D+ + F GT Y S G S + D+ S+ +L+ + GR P
Sbjct: 159 ----IDEMANEFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 205
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 32.7 bits (73), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 100/266 (37%), Gaps = 54/266 (20%)
Query: 142 RLERKLGKGGFGQVYVG----------RRVSPVNANERTGPGAVEVALKFEHRSSKGCNY 191
RLE KLG+G FG+V++G + + P + +V K H Y
Sbjct: 21 RLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL-Y 79
Query: 192 GPPYEWQVY-NTLGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVA 250
E +Y T S G KG G Y + P L ++M A
Sbjct: 80 AVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRL------PQL------------VDMAA 121
Query: 251 CIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMH 310
IA ++ +E+M+ YVH D+ N L+G + + D GLA D+
Sbjct: 122 QIA-SGMAYVERMN---YVHRDLAAANILVG-----ENLVCKVADFGLARLIEDN----- 167
Query: 311 VEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFL-LRGRLPWQGY------ 363
EY R + +++ + A L + + D+ S L L +GR+P+ G
Sbjct: 168 -EYTARQGA-KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL 225
Query: 364 -QGENKGFLVCKKKMATSPDGLCCFC 388
Q E + C + S L C C
Sbjct: 226 DQVERGYRMPCPPECPESLHDLMCQC 251
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 32.7 bits (73), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 62/163 (38%), Gaps = 15/163 (9%)
Query: 141 YRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVY 200
Y+L +LGKG F V + +P E A K + E +
Sbjct: 33 YQLFEELGKGAFSVVRRCVKKTPTQ----------EYAAKIINTKKLSARDHQKLEREAR 82
Query: 201 NTLGGSH-GVPRVHFKGRQGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAIS 258
H + R+H + ++ +V D++ G L++ + + CI + +
Sbjct: 83 ICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIH-QILE 141
Query: 259 ILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATK 301
+ +H VH D+KPEN LL K L D GLA +
Sbjct: 142 SVNHIHQHDIVHRDLKPENLLLASKCKGAAVK--LADFGLAIE 182
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 32.7 bits (73), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 65/169 (38%), Gaps = 22/169 (13%)
Query: 143 LERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNT 202
L R +G+G FG V+ G +SP N A+ VA+K + K C E +
Sbjct: 14 LGRCIGEGQFGDVHQGIYMSPENP-------AMAVAIK----TCKNCTSDSVREKFLQEA 62
Query: 203 L-----GGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAI 257
L H V + + +M + LG L ++ + + A +
Sbjct: 63 LTMRQFDHPHIVKLIGVITENPVWIIMELCTLG-ELRSFLQVRKFSLDLASLILYAYQLS 121
Query: 258 SILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDST 306
+ L + SK +VH D+ N L+ + L D GL+ DST
Sbjct: 122 TALAYLESKRFVHRDIAARNVLVSATDC-----VKLGDFGLSRYMEDST 165
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 32.7 bits (73), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 63/155 (40%), Gaps = 15/155 (9%)
Query: 146 KLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNTLGG 205
K+G+G +G VY R N+ TG ++ + ++G E + L
Sbjct: 12 KIGEGTYGVVYKAR-------NKLTGEVVALKKIRLD-TETEGVPSTAIREISLLKELNH 63
Query: 206 SHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHT-MSIEMVACIAIEAISILEKMH 264
+ V + + Y +V + L L + ++ T + + ++ + + L H
Sbjct: 64 PNIVKLLDVIHTENKLY-LVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 122
Query: 265 SKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLA 299
S +H D+KPEN L+ G + L D GLA
Sbjct: 123 SHRVLHRDLKPENLLINTEGA-----IKLADFGLA 152
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 32.7 bits (73), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 46/115 (40%), Gaps = 11/115 (9%)
Query: 243 TMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKW 302
+MS E I I A L +H++ +H DVK N LL P + D G++ K
Sbjct: 135 SMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPK-----ITDFGISKK- 188
Query: 303 RDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGR 357
G ++ V +GT+ Y + + + D+ S L +L R
Sbjct: 189 -----GTELDQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCAR 238
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 32.7 bits (73), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 56/159 (35%), Gaps = 46/159 (28%)
Query: 145 RKLGKGGFGQVYVGRRV-------------SPVNANERTGPGAVEVAL--KFEHRSS--- 186
R++G G FG VY R V S +NE+ EV K H ++
Sbjct: 60 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQY 119
Query: 187 KGCNYGPPYEWQVYN-TLGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMS 245
+GC W V LG + + VH K Q
Sbjct: 120 RGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQ--------------------------E 153
Query: 246 IEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPG 284
+E +A + A+ L +HS +H DVK N LL PG
Sbjct: 154 VE-IAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPG 191
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 32.7 bits (73), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 16/61 (26%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Query: 221 YYVMVMDMLGPSLWDVWNNNSHT-MSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFL 279
+ + ++LG S +D +N++ I V +A + ++ +H H D+KPEN L
Sbjct: 110 HMCISFELLGLSTFDFLKDNNYLPYPIHQVRHMAFQLCQAVKFLHDNKLTHTDLKPENIL 169
Query: 280 L 280
Sbjct: 170 F 170
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 32.7 bits (73), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 43/89 (48%), Gaps = 4/89 (4%)
Query: 244 MSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKW- 302
+S+ ++ + I+ + HS+ +H D+KP+N LL + L + D GLA +
Sbjct: 129 VSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFG 188
Query: 303 ---RDSTTGMHVEYDQRPDVFRGTVRYAS 328
R T + + + P++ G+ Y++
Sbjct: 189 IPIRQFTHEIITLWYRPPEILLGSRHYST 217
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 32.3 bits (72), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 52/109 (47%), Gaps = 18/109 (16%)
Query: 220 DYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFL 279
D Y+ VM+++ +L V + E ++ + + + ++ +HS G +H D+KP N +
Sbjct: 103 DVYI-VMELMDANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV 158
Query: 280 LGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVE------YDQRPDVFRG 322
+ T L ++D GLA R + T +E Y + P+V G
Sbjct: 159 VKSDCT-----LKILDFGLA---RTAGTSFMMEPEVVTRYYRAPEVILG 199
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 32.3 bits (72), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 52/109 (47%), Gaps = 18/109 (16%)
Query: 220 DYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFL 279
D Y+ VM+++ +L V + E ++ + + + ++ +HS G +H D+KP N +
Sbjct: 103 DVYI-VMELMDANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV 158
Query: 280 LGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVE------YDQRPDVFRG 322
+ T L ++D GLA R + T +E Y + P+V G
Sbjct: 159 VKSDCT-----LKILDFGLA---RTAGTSFMMEPEVVTRYYRAPEVILG 199
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 32.3 bits (72), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 41/98 (41%), Gaps = 18/98 (18%)
Query: 270 HGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRD---STTGMHVEYDQRPDVFRGTVRY 326
H DVKPEN L+ + +LVD G+A+ D + G V GT+ Y
Sbjct: 157 HRDVKPENILVSA-----DDFAYLVDFGIASATTDEKLTQLGNTV----------GTLYY 201
Query: 327 ASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQ 364
+ + R D+ +L L L G P+QG Q
Sbjct: 202 XAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQ 239
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 32.3 bits (72), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 67/169 (39%), Gaps = 22/169 (13%)
Query: 143 LERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNT 202
L R +G+G FG V+ G +SP N A+ VA+K + K C E +
Sbjct: 14 LGRCIGEGQFGDVHQGIYMSPENP-------AMAVAIK----TCKNCTSDSVREKFLQEA 62
Query: 203 L-----GGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAI 257
L H V + + +M + LG L ++ + + A +
Sbjct: 63 LTMRQFDHPHIVKLIGVITENPVWIIMELCTLG-ELRSFLQVRKFSLDLASLILYAYQLS 121
Query: 258 SILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDST 306
+ L + SK +VH D+ N L+ + D KL D GL+ DST
Sbjct: 122 TALAYLESKRFVHRDIAARNVLV---SSNDCVKLG--DFGLSRYMEDST 165
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 32.3 bits (72), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 3/45 (6%)
Query: 260 LEKMHSKGYVHGDVKPENFL-LGPPGTPDEKKLFLVDLGLATKWR 303
+E +H++G VH D+KP N L + G P+ + + D G A + R
Sbjct: 129 VEYLHAQGVVHRDLKPSNILYVDESGNPESIR--ICDFGFAKQLR 171
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 32.3 bits (72), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 3/45 (6%)
Query: 260 LEKMHSKGYVHGDVKPENFL-LGPPGTPDEKKLFLVDLGLATKWR 303
+E +H++G VH D+KP N L + G P+ + + D G A + R
Sbjct: 129 VEYLHAQGVVHRDLKPSNILYVDESGNPESIR--ICDFGFAKQLR 171
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 32.3 bits (72), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 105/263 (39%), Gaps = 48/263 (18%)
Query: 142 RLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPP---YEWQ 198
RLE KLG+G FG+V++G T G VA+K + K P E Q
Sbjct: 18 RLEVKLGQGCFGEVWMG-----------TWNGTTRVAIK----TLKPGTMSPEAFLQEAQ 62
Query: 199 VYNTLGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHT-----MSIEMVACIA 253
V L V +++ + Y++ M SL D + ++M A IA
Sbjct: 63 VMKKLRHEKLV-QLYAVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIA 121
Query: 254 IEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEY 313
++ +E+M+ YVH D++ N L+G + + D GLA D+ E+
Sbjct: 122 -SGMAYVERMN---YVHRDLRAANILVG-----ENLVCKVADFGLARLIEDN------EW 166
Query: 314 DQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFL-LRGRLPWQGY-------QG 365
R + +++ + A L + + D+ S L L +GR+P+ G Q
Sbjct: 167 TARQGA-KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 225
Query: 366 ENKGFLVCKKKMATSPDGLCCFC 388
E + C + S L C C
Sbjct: 226 ERGYRMPCPPECPESLHDLMCQC 248
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 32.3 bits (72), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 36/81 (44%), Gaps = 5/81 (6%)
Query: 221 YYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLL 280
++ +V D++ + T+S + I + ++ +H VH D+KPEN LL
Sbjct: 98 FFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILL 157
Query: 281 GPPGTPDEKKLFLVDLGLATK 301
D+ + L D G + +
Sbjct: 158 D-----DDMNIKLTDFGFSCQ 173
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 32.3 bits (72), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 69/168 (41%), Gaps = 26/168 (15%)
Query: 254 IEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEY 313
++A+ L++ H G +H DVKP N LL G ++ L D G++ + D
Sbjct: 134 VKALYYLKEKH--GVIHRDVKPSNILLDERG-----QIKLCDFGISGRLVD--------- 177
Query: 314 DQRPDVFRGTVRYASVHAHLGRTGSR-----RDDLESLAYTLIFLLRGRLPWQGYQGENK 368
D+ D G Y + ++ R D+ SL +L+ L G+ P++ + +
Sbjct: 178 DKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTD-- 235
Query: 369 GFLVCKKKMATSPDGLCCFC--PAPFRQFVEYVVNLKFDEEPNYAKYI 414
F V K + P L F+ FV+ + + P Y K +
Sbjct: 236 -FEVLTKVLQEEPPLLPGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLL 282
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 32.3 bits (72), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 36/81 (44%), Gaps = 5/81 (6%)
Query: 221 YYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLL 280
++ +V D++ + T+S + I + ++ +H VH D+KPEN LL
Sbjct: 98 FFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILL 157
Query: 281 GPPGTPDEKKLFLVDLGLATK 301
D+ + L D G + +
Sbjct: 158 D-----DDMNIKLTDFGFSCQ 173
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 32.3 bits (72), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 21/106 (19%), Positives = 43/106 (40%), Gaps = 5/106 (4%)
Query: 196 EWQVYNTLGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIE 255
E + + G + ++ ++ +V D++ + T+S + I
Sbjct: 60 EVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRA 119
Query: 256 AISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATK 301
+ ++ +H VH D+KPEN LL D+ + L D G + +
Sbjct: 120 LLEVICALHKLNIVHRDLKPENILLD-----DDMNIKLTDFGFSCQ 160
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 32.3 bits (72), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 263 MHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATK 301
+HS H D+KPEN +L P + ++ ++D GLA K
Sbjct: 130 LHSLQIAHFDLKPENIMLLDRNVP-KPRIKIIDFGLAHK 167
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 32.3 bits (72), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 263 MHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATK 301
+HS H D+KPEN +L P + ++ ++D GLA K
Sbjct: 130 LHSLQIAHFDLKPENIMLLDRNVP-KPRIKIIDFGLAHK 167
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 40/85 (47%), Gaps = 7/85 (8%)
Query: 224 MVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPP 283
+V ++G L ++ S ++ + V + + + L+ +HS +H D+KP N
Sbjct: 104 LVTHLMGADLNNIVK--SQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL----- 156
Query: 284 GTPDEKKLFLVDLGLATKWRDSTTG 308
++ +L ++D GL D TG
Sbjct: 157 AVNEDSELKILDFGLCRHTDDEMTG 181
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 41/80 (51%), Gaps = 9/80 (11%)
Query: 220 DYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFL 279
D Y+ VM+++ +L V + E ++ + + + ++ +HS G +H D+KP N +
Sbjct: 105 DVYI-VMELMDANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV 160
Query: 280 LGPPGTPDEKKLFLVDLGLA 299
+ T L ++D GLA
Sbjct: 161 VKSDCT-----LKILDFGLA 175
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 41/80 (51%), Gaps = 9/80 (11%)
Query: 220 DYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFL 279
D Y+ VM+++ +L V + E ++ + + + ++ +HS G +H D+KP N +
Sbjct: 103 DVYI-VMELMDANLSQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV 158
Query: 280 LGPPGTPDEKKLFLVDLGLA 299
+ T L ++D GLA
Sbjct: 159 VKSDAT-----LKILDFGLA 173
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 41/80 (51%), Gaps = 9/80 (11%)
Query: 220 DYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFL 279
D Y+ VM+++ +L V + E ++ + + + ++ +HS G +H D+KP N +
Sbjct: 103 DVYI-VMELMDANLSQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV 158
Query: 280 LGPPGTPDEKKLFLVDLGLA 299
+ T L ++D GLA
Sbjct: 159 VKSDAT-----LKILDFGLA 173
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 39/76 (51%), Gaps = 8/76 (10%)
Query: 224 MVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPP 283
+VM+++ +L V + E ++ + + + ++ +HS G +H D+KP N ++
Sbjct: 144 LVMELMDANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD 200
Query: 284 GTPDEKKLFLVDLGLA 299
T L ++D GLA
Sbjct: 201 CT-----LKILDFGLA 211
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 104/263 (39%), Gaps = 48/263 (18%)
Query: 142 RLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPP---YEWQ 198
RLE KLG+G FG+V++G T G VA+K + K P E Q
Sbjct: 21 RLEVKLGQGCFGEVWMG-----------TWNGTTRVAIK----TLKPGTMSPEAFLQEAQ 65
Query: 199 VYNTLGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNN-----SHTMSIEMVACIA 253
V L V +++ + Y+++ M SL D ++M A IA
Sbjct: 66 VMKKLRHEKLV-QLYAVVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIA 124
Query: 254 IEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEY 313
++ +E+M+ YVH D++ N L+G + + D GLA D+ E
Sbjct: 125 -SGMAYVERMN---YVHRDLRAANILVG-----ENLVCKVADFGLARLIEDN------EX 169
Query: 314 DQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFL-LRGRLPWQGY-------QG 365
R + +++ + A L + + D+ S L L +GR+P+ G Q
Sbjct: 170 TARQGA-KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 228
Query: 366 ENKGFLVCKKKMATSPDGLCCFC 388
E + C + S L C C
Sbjct: 229 ERGYRMPCPPECPESLHDLMCQC 251
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 65/139 (46%), Gaps = 17/139 (12%)
Query: 224 MVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPP 283
+VM+++ +L V + + E ++ + + + ++ +HS G +H D+KP N ++
Sbjct: 104 LVMELMDANLCQVIHME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD 160
Query: 284 GTPDEKKLFLVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDL 343
T L ++D GLA R ++T + P V T Y + LG D+
Sbjct: 161 CT-----LKILDFGLA---RTASTN----FMMTPYVV--TRYYRAPEVILGMGYKENVDI 206
Query: 344 ESLAYTLIFLLRGRLPWQG 362
S+ + L++G + +QG
Sbjct: 207 WSVGCIMGELVKGSVIFQG 225
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 39/76 (51%), Gaps = 8/76 (10%)
Query: 224 MVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPP 283
+VM+++ +L V + E ++ + + + ++ +HS G +H D+KP N ++
Sbjct: 144 LVMELMDANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD 200
Query: 284 GTPDEKKLFLVDLGLA 299
T L ++D GLA
Sbjct: 201 CT-----LKILDFGLA 211
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 40/85 (47%), Gaps = 7/85 (8%)
Query: 224 MVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPP 283
+V ++G L ++ ++ + V + + + L+ +HS +H D+KP N
Sbjct: 106 LVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL----- 158
Query: 284 GTPDEKKLFLVDLGLATKWRDSTTG 308
++ +L ++D GLA D TG
Sbjct: 159 AVNEDSELKILDFGLARHTDDEMTG 183
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 56/152 (36%), Gaps = 17/152 (11%)
Query: 147 LGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNTLGGS 206
+GKG FGQVY GR V E LK R Y V +G
Sbjct: 41 IGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQLKAFKREVMA--YRQTRHENVVLFMGAC 98
Query: 207 HGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSK 266
P + ++ G +L+ V + + + IA E + + +H+K
Sbjct: 99 MSPPHL---------AIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAK 149
Query: 267 GYVHGDVKPENFLLGPPGTPDEKKLFLVDLGL 298
G +H D+K +N D K+ + D GL
Sbjct: 150 GILHKDLKSKNVFY------DNGKVVITDFGL 175
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Query: 263 MHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLA 299
+H G VH D+KPEN L +E K+ + D GL+
Sbjct: 136 LHRMGIVHRDLKPENLLY--YSQDEESKIMISDFGLS 170
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 41/80 (51%), Gaps = 9/80 (11%)
Query: 220 DYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFL 279
D Y+ VM+++ +L V + E ++ + + + ++ +HS G +H D+KP N +
Sbjct: 103 DVYI-VMELMDANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV 158
Query: 280 LGPPGTPDEKKLFLVDLGLA 299
+ T L ++D GLA
Sbjct: 159 VKSDCT-----LKILDFGLA 173
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 40/85 (47%), Gaps = 7/85 (8%)
Query: 224 MVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPP 283
+V ++G L ++ ++ + V + + + L+ +HS +H D+KP N
Sbjct: 109 LVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL----- 161
Query: 284 GTPDEKKLFLVDLGLATKWRDSTTG 308
++ +L ++D GLA D TG
Sbjct: 162 AVNEDXELKILDFGLARHTDDEMTG 186
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 41/80 (51%), Gaps = 9/80 (11%)
Query: 220 DYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFL 279
D Y+ VM+++ +L V + E ++ + + + ++ +HS G +H D+KP N +
Sbjct: 104 DVYI-VMELMDANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV 159
Query: 280 LGPPGTPDEKKLFLVDLGLA 299
+ T L ++D GLA
Sbjct: 160 VKSDCT-----LKILDFGLA 174
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 41/80 (51%), Gaps = 9/80 (11%)
Query: 220 DYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFL 279
D Y+ VM+++ +L V + E ++ + + + ++ +HS G +H D+KP N +
Sbjct: 103 DVYI-VMELMDANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV 158
Query: 280 LGPPGTPDEKKLFLVDLGLA 299
+ T L ++D GLA
Sbjct: 159 VKSDCT-----LKILDFGLA 173
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 8/46 (17%)
Query: 254 IEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLA 299
+EA+S L H+ VH D+KPEN LL D ++ L D G +
Sbjct: 210 LEAVSFL---HANNIVHRDLKPENILLD-----DNMQIRLSDFGFS 247
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 41/80 (51%), Gaps = 9/80 (11%)
Query: 220 DYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFL 279
D Y+ VM+++ +L V + E ++ + + + ++ +HS G +H D+KP N +
Sbjct: 108 DVYI-VMELMDANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV 163
Query: 280 LGPPGTPDEKKLFLVDLGLA 299
+ T L ++D GLA
Sbjct: 164 VKSDCT-----LKILDFGLA 178
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 40/85 (47%), Gaps = 7/85 (8%)
Query: 224 MVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPP 283
+V ++G L ++ ++ + V + + + L+ +HS +H D+KP N
Sbjct: 109 LVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL----- 161
Query: 284 GTPDEKKLFLVDLGLATKWRDSTTG 308
++ +L ++D GLA D TG
Sbjct: 162 AVNEDXELKILDFGLARHTDDEMTG 186
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 40/85 (47%), Gaps = 7/85 (8%)
Query: 224 MVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPP 283
+V ++G L ++ ++ + V + + + L+ +HS +H D+KP N
Sbjct: 110 LVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL----- 162
Query: 284 GTPDEKKLFLVDLGLATKWRDSTTG 308
++ +L ++D GLA D TG
Sbjct: 163 AVNEDSELKILDFGLARHTDDEMTG 187
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 263 MHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATK 301
+HS H D+KPEN +L P + ++ ++D GLA K
Sbjct: 130 LHSLQIAHFDLKPENIMLLDRNVP-KPRIKIIDFGLAHK 167
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 40/85 (47%), Gaps = 7/85 (8%)
Query: 224 MVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPP 283
+V ++G L ++ ++ + V + + + L+ +HS +H D+KP N
Sbjct: 115 LVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL----- 167
Query: 284 GTPDEKKLFLVDLGLATKWRDSTTG 308
++ +L ++D GLA D TG
Sbjct: 168 AVNEDXELKILDFGLARHTDDEMTG 192
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 50/106 (47%), Gaps = 12/106 (11%)
Query: 220 DYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFL 279
D Y+ VM+++ +L V + E ++ + + + ++ +HS G +H D+KP N +
Sbjct: 103 DVYI-VMELMDANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV 158
Query: 280 LGPPGTPDEKKLFLVDLGLATKWRDS---TTGMHVEYDQRPDVFRG 322
+ T L ++D GLA S T + Y + P+V G
Sbjct: 159 VKSDCT-----LKILDFGLARTAGTSFMMTPEVVTRYYRAPEVILG 199
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 40/85 (47%), Gaps = 7/85 (8%)
Query: 224 MVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPP 283
+V ++G L ++ ++ + V + + + L+ +HS +H D+KP N
Sbjct: 104 LVTHLMGADLNNIVKXQK--LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL----- 156
Query: 284 GTPDEKKLFLVDLGLATKWRDSTTG 308
++ +L ++D GLA D TG
Sbjct: 157 AVNEDXELKILDFGLARHTDDEMTG 181
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 39/76 (51%), Gaps = 8/76 (10%)
Query: 224 MVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPP 283
+VM+++ +L V + E ++ + + + ++ +HS G +H D+KP N ++
Sbjct: 105 LVMELMDANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD 161
Query: 284 GTPDEKKLFLVDLGLA 299
T L ++D GLA
Sbjct: 162 CT-----LKILDFGLA 172
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 40/76 (52%), Gaps = 8/76 (10%)
Query: 224 MVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPP 283
+VM+++ +L V + + E ++ + + + ++ +HS G +H D+KP N ++
Sbjct: 106 LVMELMDANLCQVIHME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD 162
Query: 284 GTPDEKKLFLVDLGLA 299
T L ++D GLA
Sbjct: 163 CT-----LKILDFGLA 173
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 55/265 (20%), Positives = 96/265 (36%), Gaps = 35/265 (13%)
Query: 144 ERKLGKGGFGQVYVGRRV---------SPVNANERTGPGAVEVALKFEHRSSKGCNYGPP 194
E+++GKGGFG V+ GR V S + + +E +F+ N P
Sbjct: 24 EKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHP 83
Query: 195 YEWQVYNTLGGSHGVPRVHFKGRQ-GDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIA 253
++Y G H PR+ + GD Y ++D P W V + + + +
Sbjct: 84 NIVKLY---GLMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSV------KLRLMLDIALG 134
Query: 254 IEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEY 313
IE + + + VH D++ N L + D GL+ + S +G+ +
Sbjct: 135 IEYM----QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSVSGLLGNF 190
Query: 314 D-QRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLV 372
P+ + + + D S A L +L G P+ Y F+
Sbjct: 191 QWMAPETIGAE----------EESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFIN 240
Query: 373 CKKKMATSPDGLCCFCPAPFRQFVE 397
++ P + CP R +E
Sbjct: 241 MIREEGLRPT-IPEDCPPRLRNVIE 264
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 39/76 (51%), Gaps = 8/76 (10%)
Query: 224 MVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPP 283
+VM+++ +L V + E ++ + + + ++ +HS G +H D+KP N ++
Sbjct: 106 LVMELMDANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD 162
Query: 284 GTPDEKKLFLVDLGLA 299
T L ++D GLA
Sbjct: 163 XT-----LKILDFGLA 173
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 39/76 (51%), Gaps = 8/76 (10%)
Query: 224 MVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPP 283
+VM+++ +L V + E ++ + + + ++ +HS G +H D+KP N ++
Sbjct: 106 LVMELMDANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD 162
Query: 284 GTPDEKKLFLVDLGLA 299
T L ++D GLA
Sbjct: 163 CT-----LKILDFGLA 173
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 263 MHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATK 301
+HS H D+KPEN +L P + ++ ++D GLA K
Sbjct: 130 LHSLQIAHFDLKPENIMLLDRNVP-KPRIKIIDFGLAHK 167
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 39/76 (51%), Gaps = 8/76 (10%)
Query: 224 MVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPP 283
+VM+++ +L V + E ++ + + + ++ +HS G +H D+KP N ++
Sbjct: 107 LVMELMDANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD 163
Query: 284 GTPDEKKLFLVDLGLA 299
T L ++D GLA
Sbjct: 164 CT-----LKILDFGLA 174
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 41/80 (51%), Gaps = 9/80 (11%)
Query: 220 DYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFL 279
D Y+ VM+++ +L V + E ++ + + + ++ +HS G +H D+KP N +
Sbjct: 103 DVYI-VMELMDANLSQVIQME---LDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIV 158
Query: 280 LGPPGTPDEKKLFLVDLGLA 299
+ T L ++D GLA
Sbjct: 159 VKSDAT-----LKILDFGLA 173
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 41/80 (51%), Gaps = 9/80 (11%)
Query: 220 DYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFL 279
D Y+ VM+++ +L V + E ++ + + + ++ +HS G +H D+KP N +
Sbjct: 103 DVYI-VMELMDANLSQVIQME---LDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIV 158
Query: 280 LGPPGTPDEKKLFLVDLGLA 299
+ T L ++D GLA
Sbjct: 159 VKSDAT-----LKILDFGLA 173
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 39/76 (51%), Gaps = 8/76 (10%)
Query: 224 MVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPP 283
+VM+++ +L V + E ++ + + + ++ +HS G +H D+KP N ++
Sbjct: 107 LVMELMDANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD 163
Query: 284 GTPDEKKLFLVDLGLA 299
T L ++D GLA
Sbjct: 164 CT-----LKILDFGLA 174
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 39/76 (51%), Gaps = 8/76 (10%)
Query: 224 MVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPP 283
+VM+++ +L V + E ++ + + + ++ +HS G +H D+KP N ++
Sbjct: 106 LVMELMDANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD 162
Query: 284 GTPDEKKLFLVDLGLA 299
T L ++D GLA
Sbjct: 163 CT-----LKILDFGLA 173
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 41/80 (51%), Gaps = 9/80 (11%)
Query: 220 DYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFL 279
D Y+ VM+++ +L V + E ++ + + + ++ +HS G +H D+KP N +
Sbjct: 103 DVYI-VMELMDANLSQVIQME---LDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIV 158
Query: 280 LGPPGTPDEKKLFLVDLGLA 299
+ T L ++D GLA
Sbjct: 159 VKSDAT-----LKILDFGLA 173
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 263 MHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATK 301
+HS H D+KPEN +L P + ++ ++D GLA K
Sbjct: 129 LHSLQIAHFDLKPENIMLLDRNVP-KPRIKIIDFGLAHK 166
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 41/85 (48%), Gaps = 7/85 (8%)
Query: 224 MVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPP 283
+V ++G L ++ ++ + V + + + L+ +HS +H D+KP N +
Sbjct: 133 LVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-- 188
Query: 284 GTPDEKKLFLVDLGLATKWRDSTTG 308
++ +L ++D GLA D TG
Sbjct: 189 ---EDCELKILDFGLARHTDDEMTG 210
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 263 MHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATK 301
+HS H D+KPEN +L P + ++ ++D GLA K
Sbjct: 130 LHSLQIAHFDLKPENIMLLDRNVP-KPRIKIIDFGLAHK 167
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 263 MHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATK 301
+HS H D+KPEN +L P + ++ ++D GLA K
Sbjct: 130 LHSLQIAHFDLKPENIMLLDRNVP-KPRIKIIDFGLAHK 167
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 39/76 (51%), Gaps = 8/76 (10%)
Query: 224 MVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPP 283
+VM+++ +L V + E ++ + + + ++ +HS G +H D+KP N ++
Sbjct: 100 LVMELMDANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD 156
Query: 284 GTPDEKKLFLVDLGLA 299
T L ++D GLA
Sbjct: 157 CT-----LKILDFGLA 167
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 263 MHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATK 301
+HS H D+KPEN +L P + ++ ++D GLA K
Sbjct: 129 LHSLQIAHFDLKPENIMLLDRNVP-KPRIKIIDFGLAHK 166
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 41/80 (51%), Gaps = 9/80 (11%)
Query: 220 DYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFL 279
D Y+ VM+++ +L V + E ++ + + + ++ +HS G +H D+KP N +
Sbjct: 97 DVYI-VMELMDANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV 152
Query: 280 LGPPGTPDEKKLFLVDLGLA 299
+ T L ++D GLA
Sbjct: 153 VKSDCT-----LKILDFGLA 167
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 263 MHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATK 301
+HS H D+KPEN +L P + ++ ++D GLA K
Sbjct: 130 LHSLQIAHFDLKPENIMLLDRNVP-KPRIKIIDFGLAHK 167
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 83/218 (38%), Gaps = 16/218 (7%)
Query: 147 LGKGGFGQVYVGR-RVSPVN-ANERTGPGAVEVALKFEHRSSKG-CNYGPPYEWQVYNTL 203
LG+GGFG V+ + +V N A +R E+A + R K P + +N
Sbjct: 13 LGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAW 72
Query: 204 GGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAI--EAISILE 261
+ ++ + Y+ + +L D N E C+ I + +E
Sbjct: 73 LEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVE 132
Query: 262 KMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYDQRPDVFR 321
+HSKG +H D+KP N T D+ + + D GL T D P R
Sbjct: 133 FLHSKGLMHRDLKPSNIFF----TMDD-VVKVGDFGLVTAM-DQDEEEQTVLTPMPAYAR 186
Query: 322 -----GTVRYASVHAHLGRTGSRRDDLESLAYTLIFLL 354
GT Y S G + S + D+ SL L LL
Sbjct: 187 HTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 39/76 (51%), Gaps = 8/76 (10%)
Query: 224 MVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPP 283
+VM+++ +L V + E ++ + + + ++ +HS G +H D+KP N ++
Sbjct: 100 LVMELMDANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD 156
Query: 284 GTPDEKKLFLVDLGLA 299
T L ++D GLA
Sbjct: 157 CT-----LKILDFGLA 167
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 39/76 (51%), Gaps = 8/76 (10%)
Query: 224 MVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPP 283
+VM+++ +L V + E ++ + + + ++ +HS G +H D+KP N ++
Sbjct: 99 LVMELMDANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD 155
Query: 284 GTPDEKKLFLVDLGLA 299
T L ++D GLA
Sbjct: 156 CT-----LKILDFGLA 166
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 263 MHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATK 301
+HS H D+KPEN +L P + ++ ++D GLA K
Sbjct: 130 LHSLQIAHFDLKPENIMLLDRNVP-KPRIKIIDFGLAHK 167
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 263 MHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATK 301
+HS H D+KPEN +L P + ++ ++D GLA K
Sbjct: 130 LHSLQIAHFDLKPENIMLLDRNVP-KPRIKIIDFGLAHK 167
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 39/76 (51%), Gaps = 8/76 (10%)
Query: 224 MVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPP 283
+VM+++ +L V + E ++ + + + ++ +HS G +H D+KP N ++
Sbjct: 106 LVMELMDANLXQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD 162
Query: 284 GTPDEKKLFLVDLGLA 299
T L ++D GLA
Sbjct: 163 XT-----LKILDFGLA 173
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 48/123 (39%), Gaps = 13/123 (10%)
Query: 255 EAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYD 314
E +S LE +HS+ V+ D+K EN +L G + + D GL + M
Sbjct: 118 EIVSALEYLHSRDVVYRDIKLENLMLDKDG-----HIKITDFGLCKEGISDGATMK---- 168
Query: 315 QRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCK 374
F GT Y + R D L + ++ GRLP+ E L+
Sbjct: 169 ----XFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILM 224
Query: 375 KKM 377
+++
Sbjct: 225 EEI 227
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 263 MHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATK 301
+HS H D+KPEN +L P + ++ ++D GLA K
Sbjct: 130 LHSLQIAHFDLKPENIMLLDRNVP-KPRIKIIDFGLAHK 167
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 42/106 (39%), Gaps = 13/106 (12%)
Query: 255 EAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYD 314
E +S LE +HS+ V+ D+K EN +L G + + D GL + M
Sbjct: 113 EIVSALEYLHSRDVVYRDIKLENLMLDKDG-----HIKITDFGLCKEGISDGATMK---- 163
Query: 315 QRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPW 360
F GT Y + R D L + ++ GRLP+
Sbjct: 164 ----TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 263 MHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATK 301
+HS H D+KPEN +L P + ++ ++D GLA K
Sbjct: 130 LHSLQIAHFDLKPENIMLLDRNVP-KPRIKIIDFGLAHK 167
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 263 MHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATK 301
+HS H D+KPEN +L P + ++ ++D GLA K
Sbjct: 130 LHSLQIAHFDLKPENIMLLDRNVP-KPRIKIIDFGLAHK 167
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 31.6 bits (70), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/109 (22%), Positives = 51/109 (46%), Gaps = 9/109 (8%)
Query: 220 DYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFL 279
D+Y +VM +G L + + + + + + + + L +H+ G +H D+KP N
Sbjct: 104 DFY-LVMPFMGTDLGKLMKHEK--LGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLA 160
Query: 280 LGPPGTPDEKKLFLVDLGLATKWRDSTTGMHV-EYDQRPDVFRGTVRYA 327
+ ++ +L ++D GLA + G V + + P+V +RY
Sbjct: 161 VN-----EDCELKILDFGLARQADSEMXGXVVTRWYRAPEVILNWMRYT 204
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 31.6 bits (70), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 84/228 (36%), Gaps = 38/228 (16%)
Query: 141 YRLERKLGKGGFGQV-----YVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPY 195
Y + LG+G FG+V Y ++ + R ++ ++ E S P+
Sbjct: 11 YIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPH 70
Query: 196 EWQVYNTLGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIE 255
++Y+ + + VMV++ G L+D + M+ + +
Sbjct: 71 IIKLYDVITTPTDI-------------VMVIEYAGGELFD-YIVEKKRMTEDEGRRFFQQ 116
Query: 256 AISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDST---TGMHVE 312
I +E H VH D+KPEN LL D + + D GL+ D T
Sbjct: 117 IICAIEYCHRHKIVHRDLKPENLLLD-----DNLNVKIADFGLSNIMTDGNFLKTSCGSP 171
Query: 313 YDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPW 360
P+V G + YA D+ S L +L GRLP+
Sbjct: 172 NYAAPEVINGKL-YAGPEV----------DVWSCGIVLYVMLVGRLPF 208
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 48/123 (39%), Gaps = 13/123 (10%)
Query: 255 EAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYD 314
E +S LE +HS+ V+ D+K EN +L G + + D GL + M
Sbjct: 113 EIVSALEYLHSRDVVYRDIKLENLMLDKDG-----HIKITDFGLCKEGISDGATMK---- 163
Query: 315 QRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCK 374
F GT Y + R D L + ++ GRLP+ E L+
Sbjct: 164 ----XFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILM 219
Query: 375 KKM 377
+++
Sbjct: 220 EEI 222
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 48/123 (39%), Gaps = 13/123 (10%)
Query: 255 EAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYD 314
E +S LE +HS+ V+ D+K EN +L G + + D GL + M
Sbjct: 116 EIVSALEYLHSRDVVYRDIKLENLMLDKDG-----HIKITDFGLCKEGISDGATMK---- 166
Query: 315 QRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCK 374
F GT Y + R D L + ++ GRLP+ E L+
Sbjct: 167 ----TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILM 222
Query: 375 KKM 377
+++
Sbjct: 223 EEI 225
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 39/76 (51%), Gaps = 8/76 (10%)
Query: 224 MVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPP 283
+VM+++ +L V + E ++ + + + ++ +HS G +H D+KP N ++
Sbjct: 106 LVMELMDANLXQVIQME---LDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSD 162
Query: 284 GTPDEKKLFLVDLGLA 299
T L ++D GLA
Sbjct: 163 XT-----LKILDFGLA 173
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 41/85 (48%), Gaps = 7/85 (8%)
Query: 224 MVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPP 283
+V ++G L ++ ++ + V + + + L+ +HS +H D+KP N +
Sbjct: 123 LVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-- 178
Query: 284 GTPDEKKLFLVDLGLATKWRDSTTG 308
++ +L ++D GLA D TG
Sbjct: 179 ---EDCELKILDFGLARHTDDEMTG 200
>pdb|3B9N|A Chain A, Crystal Structure Of Long-Chain Alkane Monooxygenase
(Lada)
pdb|3B9N|B Chain B, Crystal Structure Of Long-Chain Alkane Monooxygenase
(Lada)
pdb|3B9O|A Chain A, Long-Chain Alkane Monooxygenase (Lada) In Complex With
Coenzyme Fmn
pdb|3B9O|B Chain B, Long-Chain Alkane Monooxygenase (Lada) In Complex With
Coenzyme Fmn
Length = 440
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 2/65 (3%)
Query: 479 RRPMKQRYHYNVAD--ARLAQHIEKGNEDGLFISSVASCQNLWALIMDAGTGFSAQVYEL 536
R P QR+ Y + LAQ +EKG D LF++ V +++ D + Q+
Sbjct: 24 RHPENQRHRYTDLNYWTELAQLLEKGKFDALFLADVVGIYDVYRQSRDTAVREAVQIPVN 83
Query: 537 SPYFL 541
P L
Sbjct: 84 DPLML 88
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 41/80 (51%), Gaps = 9/80 (11%)
Query: 220 DYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFL 279
D Y+ VM+++ +L V + E ++ + + + ++ +HS G +H D+KP N +
Sbjct: 103 DVYI-VMELMDANLSQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV 158
Query: 280 LGPPGTPDEKKLFLVDLGLA 299
+ T L ++D GLA
Sbjct: 159 VKSDCT-----LKILDFGLA 173
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 40/85 (47%), Gaps = 7/85 (8%)
Query: 224 MVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPP 283
+V ++G L ++ ++ + V + + + L+ +HS +H D+KP N
Sbjct: 104 LVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL----- 156
Query: 284 GTPDEKKLFLVDLGLATKWRDSTTG 308
++ +L ++D GLA D TG
Sbjct: 157 AVNEDCELKILDFGLARHTDDEMTG 181
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 39/76 (51%), Gaps = 8/76 (10%)
Query: 224 MVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPP 283
+VM+++ +L V + E ++ + + + ++ +HS G +H D+KP N ++
Sbjct: 106 LVMELMDANLXQVIQME---LDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSD 162
Query: 284 GTPDEKKLFLVDLGLA 299
T L ++D GLA
Sbjct: 163 XT-----LKILDFGLA 173
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 40/85 (47%), Gaps = 7/85 (8%)
Query: 224 MVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPP 283
+V ++G L ++ ++ + V + + + L+ +HS +H D+KP N
Sbjct: 104 LVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL----- 156
Query: 284 GTPDEKKLFLVDLGLATKWRDSTTG 308
++ +L ++D GLA D TG
Sbjct: 157 AVNEDCELKILDFGLARHTDDEMTG 181
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 40/85 (47%), Gaps = 7/85 (8%)
Query: 224 MVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPP 283
+V ++G L ++ ++ + V + + + L+ +HS +H D+KP N
Sbjct: 106 LVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL----- 158
Query: 284 GTPDEKKLFLVDLGLATKWRDSTTG 308
++ +L ++D GLA D TG
Sbjct: 159 AVNEDCELKILDFGLARHTDDEMTG 183
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 40/85 (47%), Gaps = 7/85 (8%)
Query: 224 MVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPP 283
+V ++G L ++ ++ + V + + + L+ +HS +H D+KP N
Sbjct: 109 LVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL----- 161
Query: 284 GTPDEKKLFLVDLGLATKWRDSTTG 308
++ +L ++D GLA D TG
Sbjct: 162 AVNEDCELKILDFGLARHTDDEMTG 186
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 41/85 (48%), Gaps = 7/85 (8%)
Query: 224 MVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPP 283
+V ++G L ++ ++ + V + + + L+ +HS +H D+KP N +
Sbjct: 124 LVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-- 179
Query: 284 GTPDEKKLFLVDLGLATKWRDSTTG 308
++ +L ++D GLA D TG
Sbjct: 180 ---EDCELKILDFGLARHTDDEMTG 201
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 40/85 (47%), Gaps = 7/85 (8%)
Query: 224 MVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPP 283
+V ++G L ++ ++ + V + + + L+ +HS +H D+KP N
Sbjct: 114 LVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL----- 166
Query: 284 GTPDEKKLFLVDLGLATKWRDSTTG 308
++ +L ++D GLA D TG
Sbjct: 167 AVNEDCELKILDFGLARHTDDEMTG 191
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 40/85 (47%), Gaps = 7/85 (8%)
Query: 224 MVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPP 283
+V ++G L ++ ++ + V + + + L+ +HS +H D+KP N
Sbjct: 103 LVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL----- 155
Query: 284 GTPDEKKLFLVDLGLATKWRDSTTG 308
++ +L ++D GLA D TG
Sbjct: 156 AVNEDCELKILDFGLARHTDDEMTG 180
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 40/85 (47%), Gaps = 7/85 (8%)
Query: 224 MVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPP 283
+V ++G L ++ ++ + V + + + L+ +HS +H D+KP N
Sbjct: 104 LVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL----- 156
Query: 284 GTPDEKKLFLVDLGLATKWRDSTTG 308
++ +L ++D GLA D TG
Sbjct: 157 AVNEDCELKILDFGLARHTDDEMTG 181
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 40/85 (47%), Gaps = 7/85 (8%)
Query: 224 MVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPP 283
+V ++G L ++ ++ + V + + + L+ +HS +H D+KP N
Sbjct: 102 LVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL----- 154
Query: 284 GTPDEKKLFLVDLGLATKWRDSTTG 308
++ +L ++D GLA D TG
Sbjct: 155 AVNEDCELKILDFGLARHTDDEMTG 179
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 41/85 (48%), Gaps = 7/85 (8%)
Query: 224 MVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPP 283
+V ++G L ++ ++ + V + + + L+ +HS +H D+KP N +
Sbjct: 123 LVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-- 178
Query: 284 GTPDEKKLFLVDLGLATKWRDSTTG 308
++ +L ++D GLA D TG
Sbjct: 179 ---EDCELKILDFGLARHTDDEMTG 200
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 48/123 (39%), Gaps = 13/123 (10%)
Query: 255 EAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYD 314
E +S LE +HS+ V+ D+K EN +L G + + D GL + M
Sbjct: 113 EIVSALEYLHSRDVVYRDIKLENLMLDKDG-----HIKITDFGLCKEGISDGATMK---- 163
Query: 315 QRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCK 374
F GT Y + R D L + ++ GRLP+ E L+
Sbjct: 164 ----TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILM 219
Query: 375 KKM 377
+++
Sbjct: 220 EEI 222
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 39/76 (51%), Gaps = 8/76 (10%)
Query: 224 MVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPP 283
+VM+++ +L V + E ++ + + + ++ +HS G +H D+KP N ++
Sbjct: 99 LVMELMDANLXQVIQME---LDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSD 155
Query: 284 GTPDEKKLFLVDLGLA 299
T L ++D GLA
Sbjct: 156 XT-----LKILDFGLA 166
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 40/85 (47%), Gaps = 7/85 (8%)
Query: 224 MVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPP 283
+V ++G L ++ ++ + V + + + L+ +HS +H D+KP N
Sbjct: 100 LVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL----- 152
Query: 284 GTPDEKKLFLVDLGLATKWRDSTTG 308
++ +L ++D GLA D TG
Sbjct: 153 AVNEDCELKILDFGLARHTDDEMTG 177
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 40/85 (47%), Gaps = 7/85 (8%)
Query: 224 MVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPP 283
+V ++G L ++ ++ + V + + + L+ +HS +H D+KP N
Sbjct: 101 LVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL----- 153
Query: 284 GTPDEKKLFLVDLGLATKWRDSTTG 308
++ +L ++D GLA D TG
Sbjct: 154 AVNEDCELKILDFGLARHTDDEMTG 178
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 40/85 (47%), Gaps = 7/85 (8%)
Query: 224 MVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPP 283
+V ++G L ++ ++ + V + + + L+ +HS +H D+KP N
Sbjct: 116 LVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL----- 168
Query: 284 GTPDEKKLFLVDLGLATKWRDSTTG 308
++ +L ++D GLA D TG
Sbjct: 169 AVNEDCELKILDFGLARHTDDEMTG 193
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 40/85 (47%), Gaps = 7/85 (8%)
Query: 224 MVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPP 283
+V ++G L ++ ++ + V + + + L+ +HS +H D+KP N
Sbjct: 106 LVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL----- 158
Query: 284 GTPDEKKLFLVDLGLATKWRDSTTG 308
++ +L ++D GLA D TG
Sbjct: 159 AVNEDCELKILDFGLARHTDDEMTG 183
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 41/85 (48%), Gaps = 7/85 (8%)
Query: 224 MVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPP 283
+V ++G L ++ ++ + V + + + L+ +HS +H D+KP N +
Sbjct: 106 LVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-- 161
Query: 284 GTPDEKKLFLVDLGLATKWRDSTTG 308
++ +L ++D GLA D TG
Sbjct: 162 ---EDCELKILDFGLARHTDDEMTG 183
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 40/85 (47%), Gaps = 7/85 (8%)
Query: 224 MVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPP 283
+V ++G L ++ ++ + V + + + L+ +HS +H D+KP N
Sbjct: 116 LVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL----- 168
Query: 284 GTPDEKKLFLVDLGLATKWRDSTTG 308
++ +L ++D GLA D TG
Sbjct: 169 AVNEDCELKILDFGLARHTDDEMTG 193
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/88 (23%), Positives = 36/88 (40%), Gaps = 5/88 (5%)
Query: 212 VHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHG 271
VHF+ +V +++ L V ++ +S + + + L +H G VH
Sbjct: 99 VHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHR 158
Query: 272 DVKPENFLLGPPGTPDEKKLFLVDLGLA 299
D+ P N LL D + + D LA
Sbjct: 159 DLHPGNILLA-----DNNDITICDFNLA 181
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 42/90 (46%), Gaps = 8/90 (8%)
Query: 219 GDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENF 278
D Y +V ++G L ++ ++ + V + + + L+ +HS +H D+KP N
Sbjct: 100 NDVY-LVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 156
Query: 279 LLGPPGTPDEKKLFLVDLGLATKWRDSTTG 308
++ +L ++D GLA D TG
Sbjct: 157 -----AVNEDCELKILDFGLARHTDDEMTG 181
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 40/85 (47%), Gaps = 7/85 (8%)
Query: 224 MVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPP 283
+V ++G L ++ ++ + V + + + L+ +HS +H D+KP N
Sbjct: 110 LVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL----- 162
Query: 284 GTPDEKKLFLVDLGLATKWRDSTTG 308
++ +L ++D GLA D TG
Sbjct: 163 AVNEDCELKILDFGLARHTDDEMTG 187
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 40/85 (47%), Gaps = 7/85 (8%)
Query: 224 MVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPP 283
+V ++G L ++ ++ + V + + + L+ +HS +H D+KP N
Sbjct: 111 LVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL----- 163
Query: 284 GTPDEKKLFLVDLGLATKWRDSTTG 308
++ +L ++D GLA D TG
Sbjct: 164 AVNEDCELKILDFGLARHTDDEMTG 188
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 43/100 (43%), Gaps = 10/100 (10%)
Query: 230 GPSLWDVWNNNS----HTMSIEMVACIAI-EAISILEKMHSKGYVHGDVKPENFLLGPPG 284
G SL++V + +T + M C+ + ++ L M K +H D+KP N LL G
Sbjct: 84 GGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGG 143
Query: 285 TPDEKKLFLVDLGLATKWRDSTTGMHVEYD-QRPDVFRGT 323
T L + D G A + T P+VF G+
Sbjct: 144 T----VLKICDFGTACDIQTHMTNNKGSAAWMAPEVFEGS 179
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 42/90 (46%), Gaps = 8/90 (8%)
Query: 219 GDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENF 278
D Y +V ++G L ++ ++ + V + + + L+ +HS +H D+KP N
Sbjct: 100 NDVY-LVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 156
Query: 279 LLGPPGTPDEKKLFLVDLGLATKWRDSTTG 308
++ +L ++D GLA D TG
Sbjct: 157 -----AVNEDCELKILDFGLARHTDDEMTG 181
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 40/85 (47%), Gaps = 7/85 (8%)
Query: 224 MVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPP 283
+V ++G L ++ ++ + V + + + L+ +HS +H D+KP N
Sbjct: 100 LVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL----- 152
Query: 284 GTPDEKKLFLVDLGLATKWRDSTTG 308
++ +L ++D GLA D TG
Sbjct: 153 AVNEDCELKILDFGLARHTDDEMTG 177
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 40/85 (47%), Gaps = 7/85 (8%)
Query: 224 MVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPP 283
+V ++G L ++ ++ + V + + + L+ +HS +H D+KP N
Sbjct: 104 LVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL----- 156
Query: 284 GTPDEKKLFLVDLGLATKWRDSTTG 308
++ +L ++D GLA D TG
Sbjct: 157 AVNEDCELKILDFGLARHTDDEMTG 181
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 40/85 (47%), Gaps = 7/85 (8%)
Query: 224 MVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPP 283
+V ++G L ++ ++ + V + + + L+ +HS +H D+KP N
Sbjct: 111 LVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL----- 163
Query: 284 GTPDEKKLFLVDLGLATKWRDSTTG 308
++ +L ++D GLA D TG
Sbjct: 164 AVNEDCELKILDFGLARHTADEMTG 188
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 41/85 (48%), Gaps = 7/85 (8%)
Query: 224 MVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPP 283
+V ++G L ++ ++ + V + + + L+ +HS +H D+KP N +
Sbjct: 124 LVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-- 179
Query: 284 GTPDEKKLFLVDLGLATKWRDSTTG 308
++ +L ++D GLA D TG
Sbjct: 180 ---EDCELKILDFGLARHTDDEMTG 201
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 40/85 (47%), Gaps = 7/85 (8%)
Query: 224 MVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPP 283
+V ++G L ++ ++ + V + + + L+ +HS +H D+KP N
Sbjct: 101 LVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL----- 153
Query: 284 GTPDEKKLFLVDLGLATKWRDSTTG 308
++ +L ++D GLA D TG
Sbjct: 154 AVNEDCELKILDFGLARHTDDEMTG 178
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 40/85 (47%), Gaps = 7/85 (8%)
Query: 224 MVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPP 283
+V ++G L ++ ++ + V + + + L+ +HS +H D+KP N
Sbjct: 110 LVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL----- 162
Query: 284 GTPDEKKLFLVDLGLATKWRDSTTG 308
++ +L ++D GLA D TG
Sbjct: 163 AVNEDCELKILDFGLARHTDDEMTG 187
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/88 (23%), Positives = 36/88 (40%), Gaps = 5/88 (5%)
Query: 212 VHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHG 271
VHF+ +V +++ L V ++ +S + + + L +H G VH
Sbjct: 99 VHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHR 158
Query: 272 DVKPENFLLGPPGTPDEKKLFLVDLGLA 299
D+ P N LL D + + D LA
Sbjct: 159 DLHPGNILLA-----DNNDITICDFNLA 181
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 40/85 (47%), Gaps = 7/85 (8%)
Query: 224 MVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPP 283
+V ++G L ++ ++ + V + + + L+ +HS +H D+KP N
Sbjct: 104 LVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL----- 156
Query: 284 GTPDEKKLFLVDLGLATKWRDSTTG 308
++ +L ++D GLA D TG
Sbjct: 157 AVNEDCELKILDFGLARHTDDEMTG 181
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 42/90 (46%), Gaps = 8/90 (8%)
Query: 219 GDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENF 278
D Y +V ++G L ++ ++ + V + + + L+ +HS +H D+KP N
Sbjct: 100 NDVY-LVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 156
Query: 279 LLGPPGTPDEKKLFLVDLGLATKWRDSTTG 308
++ +L ++D GLA D TG
Sbjct: 157 -----AVNEDCELKILDFGLARHTDDEMTG 181
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 40/85 (47%), Gaps = 7/85 (8%)
Query: 224 MVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPP 283
+V ++G L ++ ++ + V + + + L+ +HS +H D+KP N
Sbjct: 115 LVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL----- 167
Query: 284 GTPDEKKLFLVDLGLATKWRDSTTG 308
++ +L ++D GLA D TG
Sbjct: 168 AVNEDCELKILDFGLARHTDDEMTG 192
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 45/115 (39%), Gaps = 11/115 (9%)
Query: 243 TMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKW 302
+MS E I I A L +H++ +H DVK N LL P + D G++ K
Sbjct: 135 SMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPK-----ITDFGISKK- 188
Query: 303 RDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGR 357
G + V +GT+ Y + + + D+ S L +L R
Sbjct: 189 -----GTELGQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCAR 238
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 40/85 (47%), Gaps = 7/85 (8%)
Query: 224 MVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPP 283
+V ++G L ++ ++ + V + + + L+ +HS +H D+KP N
Sbjct: 116 LVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL----- 168
Query: 284 GTPDEKKLFLVDLGLATKWRDSTTG 308
++ +L ++D GLA D TG
Sbjct: 169 AVNEDCELKILDFGLARHTDDEMTG 193
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 31.2 bits (69), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 40/85 (47%), Gaps = 7/85 (8%)
Query: 224 MVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPP 283
+V ++G L ++ ++ + V + + + L+ +HS +H D+KP N
Sbjct: 127 LVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL----- 179
Query: 284 GTPDEKKLFLVDLGLATKWRDSTTG 308
++ +L ++D GLA D TG
Sbjct: 180 AVNEDCELKILDFGLARHTDDEMTG 204
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 31.2 bits (69), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 40/85 (47%), Gaps = 7/85 (8%)
Query: 224 MVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPP 283
+V ++G L ++ ++ + V + + + L+ +HS +H D+KP N
Sbjct: 111 LVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL----- 163
Query: 284 GTPDEKKLFLVDLGLATKWRDSTTG 308
++ +L ++D GLA D TG
Sbjct: 164 AVNEDCELKILDFGLARHTADEMTG 188
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 31.2 bits (69), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 40/85 (47%), Gaps = 7/85 (8%)
Query: 224 MVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPP 283
+V ++G L ++ ++ + V + + + L+ +HS +H D+KP N
Sbjct: 111 LVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL----- 163
Query: 284 GTPDEKKLFLVDLGLATKWRDSTTG 308
++ +L ++D GLA D TG
Sbjct: 164 AVNEDCELKILDFGLARHTADEMTG 188
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 31.2 bits (69), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 5/53 (9%)
Query: 247 EMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLA 299
E + + + + L+ +HS VH D+KP+N L+ G ++ L D GLA
Sbjct: 120 ETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSG-----QIKLADFGLA 167
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 31.2 bits (69), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 40/85 (47%), Gaps = 7/85 (8%)
Query: 224 MVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPP 283
+V ++G L ++ ++ + V + + + L+ +HS +H D+KP N
Sbjct: 104 LVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL----- 156
Query: 284 GTPDEKKLFLVDLGLATKWRDSTTG 308
++ +L ++D GLA D TG
Sbjct: 157 AVNEDCELKILDFGLARHTDDEMTG 181
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 31.2 bits (69), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 40/85 (47%), Gaps = 7/85 (8%)
Query: 224 MVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPP 283
+V ++G L ++ ++ + V + + + L+ +HS +H D+KP N
Sbjct: 110 LVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL----- 162
Query: 284 GTPDEKKLFLVDLGLATKWRDSTTG 308
++ +L ++D GLA D TG
Sbjct: 163 AVNEDCELKILDFGLARHTDDEMTG 187
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 31.2 bits (69), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 40/85 (47%), Gaps = 7/85 (8%)
Query: 224 MVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPP 283
+V ++G L ++ ++ + V + + + L+ +HS +H D+KP N
Sbjct: 104 LVTHLMGADLNNIVKXQK--LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL----- 156
Query: 284 GTPDEKKLFLVDLGLATKWRDSTTG 308
++ +L ++D GLA D TG
Sbjct: 157 AVNEDCELKILDFGLARHTDDEMTG 181
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 31.2 bits (69), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 48/123 (39%), Gaps = 13/123 (10%)
Query: 255 EAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYD 314
E +S LE +HS+ V+ D+K EN +L G + + D GL + M
Sbjct: 113 EIVSALEYLHSRDVVYRDIKLENLMLDKDG-----HIKITDFGLCKEGISDGATMK---- 163
Query: 315 QRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCK 374
F GT Y + R D L + ++ GRLP+ E L+
Sbjct: 164 ----XFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILM 219
Query: 375 KKM 377
+++
Sbjct: 220 EEI 222
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 31.2 bits (69), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 41/89 (46%), Gaps = 9/89 (10%)
Query: 220 DYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFL 279
D+Y +VM + L + S E + + + + L+ +HS G VH D+KP N
Sbjct: 121 DFY-LVMPFMQTDLQKIMGME---FSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLA 176
Query: 280 LGPPGTPDEKKLFLVDLGLATKWRDSTTG 308
+ ++ +L ++D GLA TG
Sbjct: 177 VN-----EDCELKILDFGLARHADAEMTG 200
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 31.2 bits (69), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 36/84 (42%), Gaps = 6/84 (7%)
Query: 242 HTMSIEMVACIAI-EAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLAT 300
+T + M C+ + ++ L M K +H D+KP N LL GT L + D G A
Sbjct: 99 YTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGT----VLKICDFGTAC 154
Query: 301 KWRDSTTGMHVEYD-QRPDVFRGT 323
+ T P+VF G+
Sbjct: 155 DIQTHMTNNKGSAAWMAPEVFEGS 178
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 40/85 (47%), Gaps = 7/85 (8%)
Query: 224 MVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPP 283
+V ++G L ++ ++ + V + + + L+ +HS +H D+KP N
Sbjct: 104 LVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL----- 156
Query: 284 GTPDEKKLFLVDLGLATKWRDSTTG 308
++ +L ++D GLA D TG
Sbjct: 157 AVNEDCELKILDFGLARHTDDEMTG 181
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 5/49 (10%)
Query: 260 LEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTG 308
L+ +HS +H D+KP N ++ +L ++D GLA D TG
Sbjct: 134 LKYIHSADIIHRDLKPSNL-----AVNEDCELKILDFGLARHTDDEMTG 177
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 40/85 (47%), Gaps = 7/85 (8%)
Query: 224 MVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPP 283
+V ++G L ++ ++ + V + + + L+ +HS +H D+KP N
Sbjct: 109 LVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL----- 161
Query: 284 GTPDEKKLFLVDLGLATKWRDSTTG 308
++ +L ++D GLA D TG
Sbjct: 162 AVNEDCELKILDFGLARHTDDEMTG 186
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 5/53 (9%)
Query: 247 EMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLA 299
E + + + + L+ +HS VH D+KP+N L+ G ++ L D GLA
Sbjct: 120 ETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSG-----QIKLADFGLA 167
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 48/123 (39%), Gaps = 13/123 (10%)
Query: 255 EAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYD 314
E +S LE +HS+ V+ D+K EN +L G + + D GL + M
Sbjct: 113 EIVSALEYLHSRDVVYRDIKLENLMLDKDG-----HIKITDFGLCKEGISDGATMK---- 163
Query: 315 QRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCK 374
F GT Y + R D L + ++ GRLP+ E L+
Sbjct: 164 ----XFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILM 219
Query: 375 KKM 377
+++
Sbjct: 220 EEI 222
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 5/53 (9%)
Query: 247 EMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLA 299
E + + + + L+ +HS VH D+KP+N L+ G ++ L D GLA
Sbjct: 120 ETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSG-----QIKLADFGLA 167
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Query: 252 IAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLA 299
+ + + ++ +H G VH D+KPEN L ++ K+ + D GL+
Sbjct: 121 LIFQVLDAVKYLHDLGIVHRDLKPENLLYY--SLDEDSKIMISDFGLS 166
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Query: 252 IAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLA 299
+ + + ++ +H G VH D+KPEN L ++ K+ + D GL+
Sbjct: 121 LIFQVLDAVKYLHDLGIVHRDLKPENLLYY--SLDEDSKIMISDFGLS 166
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Query: 252 IAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLA 299
+ + + ++ +H G VH D+KPEN L ++ K+ + D GL+
Sbjct: 121 LIFQVLDAVKYLHDLGIVHRDLKPENLLYY--SLDEDSKIMISDFGLS 166
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 5/40 (12%)
Query: 260 LEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLA 299
L+ +H+ VH D+KPEN L+ GT + L D GLA
Sbjct: 125 LDFLHANCIVHRDLKPENILVTSGGT-----VKLADFGLA 159
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 5/40 (12%)
Query: 260 LEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLA 299
L+ +H+ VH D+KPEN L+ GT + L D GLA
Sbjct: 125 LDFLHANCIVHRDLKPENILVTSGGT-----VKLADFGLA 159
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 30.8 bits (68), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 79/204 (38%), Gaps = 26/204 (12%)
Query: 135 VGGSPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALK-FEHRSSKGCNYGP 193
+ S ++ KLG G + VY G N+ TG V VALK + S +G
Sbjct: 1 MSSSSQFKQLEKLGNGTYATVYKG-------LNKTTG---VYVALKEVKLDSEEGTPSTA 50
Query: 194 PYEWQVYNTLGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWN-----NNSHTMSIEM 248
E + L + V R++ + +V + + L + N + + +
Sbjct: 51 IREISLMKELKHENIV-RLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNL 109
Query: 249 VACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTG 308
V + + L H +H D+KP+N L+ G +L L D GLA +
Sbjct: 110 VKYFQWQLLQGLAFCHENKILHRDLKPQNLLINKRG-----QLKLGDFGLARAFGIPVNT 164
Query: 309 MHVE----YDQRPDVFRGTVRYAS 328
E + + PDV G+ Y++
Sbjct: 165 FSSEVVTLWYRAPDVLMGSRTYST 188
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 30.8 bits (68), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 5/40 (12%)
Query: 260 LEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLA 299
L+ +H+ VH D+KPEN L+ GT + L D GLA
Sbjct: 125 LDFLHANCIVHRDLKPENILVTSGGT-----VKLADFGLA 159
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 50/129 (38%), Gaps = 12/129 (9%)
Query: 260 LEKMHSKGYVHGDVKPENFL--LGPPGTPDEKKLFLVDLGLATKWRDSTTGMHV---EYD 314
+ + G VH ++KP N + +G G K L D G A + D + + E
Sbjct: 125 MNHLRENGIVHRNIKPGNIMRVIGEDGQSVYK---LTDFGAARELEDDEQFVSLYGTEEY 181
Query: 315 QRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCK 374
PD++ V G T DL S+ T G LP++ ++G + V
Sbjct: 182 LHPDMYERAVLRKDHQKKYGATV----DLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMY 237
Query: 375 KKMATSPDG 383
K + P G
Sbjct: 238 KIITGKPSG 246
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Query: 252 IAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLA 299
+ + + ++ +H G VH D+KPEN L ++ K+ + D GL+
Sbjct: 121 LIFQVLDAVKYLHDLGIVHRDLKPENLLYY--SLDEDSKIMISDFGLS 166
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 5/40 (12%)
Query: 260 LEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLA 299
L+ +H+ VH D+KPEN L+ GT + L D GLA
Sbjct: 133 LDFLHANCIVHRDLKPENILVTSGGT-----VKLADFGLA 167
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 41/89 (46%), Gaps = 9/89 (10%)
Query: 220 DYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFL 279
D+Y +VM + L + S E + + + + L+ +HS G VH D+KP N
Sbjct: 103 DFY-LVMPFMQTDLQKIMGLK---FSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLA 158
Query: 280 LGPPGTPDEKKLFLVDLGLATKWRDSTTG 308
+ ++ +L ++D GLA TG
Sbjct: 159 VN-----EDCELKILDFGLARHADAEMTG 182
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 39/194 (20%), Positives = 85/194 (43%), Gaps = 26/194 (13%)
Query: 204 GGSHGVPRVHFKGRQGDYYVMVMDMLGP--SLWDVWNNNSHTMSIEMVACIAIEAISILE 261
G GV R+ + D +V++++ P L+D + E+ + + +
Sbjct: 113 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVR 171
Query: 262 KMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYDQRPDVFR 321
H+ G +H D+K EN L+ + +L L+D G +D+ ++ ++D
Sbjct: 172 HCHNCGVLHRDIKDENILID----LNRGELKLIDFGSGALLKDT---VYTDFD------- 217
Query: 322 GTVRYA-----SVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCKKK 376
GT Y+ H + GR+ + + SL L ++ G +P++ + +G + +++
Sbjct: 218 GTRVYSPPEWIRYHRYHGRSAA----VWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQR 273
Query: 377 MATSPDGLCCFCPA 390
+++ L +C A
Sbjct: 274 VSSECQHLIRWCLA 287
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 31/142 (21%), Positives = 62/142 (43%), Gaps = 16/142 (11%)
Query: 143 LERKLGKGGFGQVYVG--RRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVY 200
++ KLG G +G+VY G ++ S A + +EV +F ++ V
Sbjct: 17 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAA------------VM 63
Query: 201 NTLGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNN-NSHTMSIEMVACIAIEAISI 259
+ + V + R+ +Y+++ M +L D N +S ++ +A + S
Sbjct: 64 KEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA 123
Query: 260 LEKMHSKGYVHGDVKPENFLLG 281
+E + K ++H D+ N L+G
Sbjct: 124 MEYLEKKNFIHRDLAARNCLVG 145
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 30.4 bits (67), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 31/142 (21%), Positives = 60/142 (42%), Gaps = 16/142 (11%)
Query: 143 LERKLGKGGFGQVYVG--RRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVY 200
++ KLG G +G+VY G ++ S A + +EV + E V
Sbjct: 15 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLK-------------EAAVM 61
Query: 201 NTLGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNN-NSHTMSIEMVACIAIEAISI 259
+ + V + R+ +Y+++ M +L D N +S ++ +A + S
Sbjct: 62 KEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA 121
Query: 260 LEKMHSKGYVHGDVKPENFLLG 281
+E + K ++H D+ N L+G
Sbjct: 122 MEYLEKKNFIHRDLAARNCLVG 143
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 30.4 bits (67), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 50/129 (38%), Gaps = 12/129 (9%)
Query: 260 LEKMHSKGYVHGDVKPENFL--LGPPGTPDEKKLFLVDLGLATKWRDSTTGMHV---EYD 314
+ + G VH ++KP N + +G G K L D G A + D + + E
Sbjct: 125 MNHLRENGIVHRNIKPGNIMRVIGEDGQSVYK---LTDFGAARELEDDEQFVXLYGTEEY 181
Query: 315 QRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCK 374
PD++ V G T DL S+ T G LP++ ++G + V
Sbjct: 182 LHPDMYERAVLRKDHQKKYGATV----DLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMY 237
Query: 375 KKMATSPDG 383
K + P G
Sbjct: 238 KIITGKPSG 246
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 30.4 bits (67), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 31/142 (21%), Positives = 60/142 (42%), Gaps = 16/142 (11%)
Query: 143 LERKLGKGGFGQVYVG--RRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVY 200
++ KLG G +G+VY G ++ S A + +EV + E V
Sbjct: 17 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLK-------------EAAVM 63
Query: 201 NTLGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNN-NSHTMSIEMVACIAIEAISI 259
+ + V + R+ +Y+++ M +L D N +S ++ +A + S
Sbjct: 64 KEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA 123
Query: 260 LEKMHSKGYVHGDVKPENFLLG 281
+E + K ++H D+ N L+G
Sbjct: 124 MEYLEKKNFIHRDLAARNCLVG 145
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 30.4 bits (67), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Query: 258 SILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLA 299
S L +H +H D+KPEN +L P P ++DLG A
Sbjct: 132 SALRYLHENRIIHRDLKPENIVLQP--GPQRLIHKIIDLGYA 171
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 30.4 bits (67), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Query: 258 SILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLA 299
S L +H +H D+KPEN +L P P ++DLG A
Sbjct: 133 SALRYLHENRIIHRDLKPENIVLQP--GPQRLIHKIIDLGYA 172
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 30.4 bits (67), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 40/85 (47%), Gaps = 7/85 (8%)
Query: 224 MVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPP 283
+V ++G L ++ ++ + V + + + L+ +HS +H D+KP N
Sbjct: 104 LVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL----- 156
Query: 284 GTPDEKKLFLVDLGLATKWRDSTTG 308
++ +L ++D GLA D TG
Sbjct: 157 AVNEDCELKILDYGLARHTDDEMTG 181
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 30.4 bits (67), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 59/147 (40%), Gaps = 23/147 (15%)
Query: 144 ERKLGKGGFGQVYVGRRV---------SPVNANERTGPGAVEVALKFEHRSSKGCNYGPP 194
E+++GKGGFG V+ GR V S + + +E +F+ N P
Sbjct: 24 EKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHP 83
Query: 195 YEWQVYNTLGGSHGVPRVHFKGRQ-GDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIA 253
++Y G H PR+ + GD Y ++D P W V + + + +
Sbjct: 84 NIVKLY---GLMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSV------KLRLMLDIALG 134
Query: 254 IEAISILEKMHSKGYVHGDVKPENFLL 280
IE + + + VH D++ N L
Sbjct: 135 IEYM----QNQNPPIVHRDLRSPNIFL 157
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 30.4 bits (67), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 14/51 (27%), Positives = 28/51 (54%), Gaps = 5/51 (9%)
Query: 255 EAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDS 305
+ I +E +H + +H D+KP N L+G G + + D G++ +++ S
Sbjct: 145 DLIKGIEYLHYQKIIHRDIKPSNLLVGEDG-----HIKIADFGVSNEFKGS 190
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 30.4 bits (67), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 40/85 (47%), Gaps = 7/85 (8%)
Query: 224 MVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPP 283
+V ++G L ++ ++ + V + + + L+ +HS +H D+KP N
Sbjct: 104 LVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL----- 156
Query: 284 GTPDEKKLFLVDLGLATKWRDSTTG 308
++ +L ++D GLA D TG
Sbjct: 157 AVNEDCELKILDAGLARHTDDEMTG 181
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 30.0 bits (66), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 59/147 (40%), Gaps = 23/147 (15%)
Query: 144 ERKLGKGGFGQVYVGRRV---------SPVNANERTGPGAVEVALKFEHRSSKGCNYGPP 194
E+++GKGGFG V+ GR V S + + +E +F+ N P
Sbjct: 24 EKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHP 83
Query: 195 YEWQVYNTLGGSHGVPRVHFKGRQ-GDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIA 253
++Y G H PR+ + GD Y ++D P W V + + + +
Sbjct: 84 NIVKLY---GLMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSV------KLRLMLDIALG 134
Query: 254 IEAISILEKMHSKGYVHGDVKPENFLL 280
IE + + + VH D++ N L
Sbjct: 135 IEYM----QNQNPPIVHRDLRSPNIFL 157
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 30.0 bits (66), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 44/109 (40%), Gaps = 17/109 (15%)
Query: 260 LEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLA---TKWRDSTTGMHVEYDQR 316
++ +HS H DVKPEN LL P+ L L D G A T TT + Y
Sbjct: 144 IQYLHSINIAHRDVKPEN-LLYTSKRPN-AILKLTDFGFAKETTSHNSLTTPCYTPYYVA 201
Query: 317 PDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQG 365
P+V G +Y + D+ SL + LL G P+ G
Sbjct: 202 PEVL-GPEKY-----------DKSCDMWSLGVIMYILLCGYPPFYSNHG 238
>pdb|3Q5Z|A Chain A, Crystal Structure Of Virulent Allele Rop5b Pseudokinase
Domain
pdb|3Q60|A Chain A, Crystal Structure Of Virulent Allele Rop5b Pseudokinase
Domain Bound To Atp
Length = 371
Score = 30.0 bits (66), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 7/63 (11%)
Query: 246 IEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDS 305
I + + + I + + SKG VHG P+N + P G +L L D ++ W+
Sbjct: 193 ILALHILTAQLIRLAANLQSKGLVHGHFTPDNLFIMPDG-----RLMLGD--VSALWKVG 245
Query: 306 TTG 308
T G
Sbjct: 246 TRG 248
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 30.0 bits (66), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 44/109 (40%), Gaps = 17/109 (15%)
Query: 260 LEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLA---TKWRDSTTGMHVEYDQR 316
++ +HS H DVKPEN LL P+ L L D G A T TT + Y
Sbjct: 129 IQYLHSINIAHRDVKPEN-LLYTSKRPN-AILKLTDFGFAKETTSHNSLTTPCYTPYYVA 186
Query: 317 PDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQG 365
P+V G +Y + D+ SL + LL G P+ G
Sbjct: 187 PEVL-GPEKY-----------DKSCDMWSLGVIMYILLCGYPPFYSNHG 223
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 30.0 bits (66), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 44/109 (40%), Gaps = 17/109 (15%)
Query: 260 LEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLA---TKWRDSTTGMHVEYDQR 316
++ +HS H DVKPEN LL P+ L L D G A T TT + Y
Sbjct: 134 IQYLHSINIAHRDVKPEN-LLYTSKRPN-AILKLTDFGFAKETTSHNSLTTPCYTPYYVA 191
Query: 317 PDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQG 365
P+V G +Y + D+ SL + LL G P+ G
Sbjct: 192 PEVL-GPEKY-----------DKSCDMWSLGVIMYILLCGYPPFYSNHG 228
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 30.0 bits (66), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 40/85 (47%), Gaps = 7/85 (8%)
Query: 224 MVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPP 283
+V ++G L ++ ++ + V + + + L+ +HS +H D+KP N
Sbjct: 104 LVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL----- 156
Query: 284 GTPDEKKLFLVDLGLATKWRDSTTG 308
++ +L ++D GLA D TG
Sbjct: 157 AVNEDCELKILDRGLARHTDDEMTG 181
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 30.0 bits (66), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 44/109 (40%), Gaps = 17/109 (15%)
Query: 260 LEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLA---TKWRDSTTGMHVEYDQR 316
++ +HS H DVKPEN LL P+ L L D G A T TT + Y
Sbjct: 136 IQYLHSINIAHRDVKPEN-LLYTSKRPN-AILKLTDFGFAKETTSHNSLTTPCYTPYYVA 193
Query: 317 PDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQG 365
P+V G +Y + D+ SL + LL G P+ G
Sbjct: 194 PEVL-GPEKY-----------DKSCDMWSLGVIMYILLCGYPPFYSNHG 230
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 30.0 bits (66), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 44/109 (40%), Gaps = 17/109 (15%)
Query: 260 LEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLA---TKWRDSTTGMHVEYDQR 316
++ +HS H DVKPEN LL P+ L L D G A T TT + Y
Sbjct: 135 IQYLHSINIAHRDVKPEN-LLYTSKRPN-AILKLTDFGFAKETTSHNSLTTPCYTPYYVA 192
Query: 317 PDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQG 365
P+V G +Y + D+ SL + LL G P+ G
Sbjct: 193 PEVL-GPEKY-----------DKSCDMWSLGVIMYILLCGYPPFYSNHG 229
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 30.0 bits (66), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 44/109 (40%), Gaps = 17/109 (15%)
Query: 260 LEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLA---TKWRDSTTGMHVEYDQR 316
++ +HS H DVKPEN LL P+ L L D G A T TT + Y
Sbjct: 130 IQYLHSINIAHRDVKPEN-LLYTSKRPN-AILKLTDFGFAKETTSHNSLTTPCYTPYYVA 187
Query: 317 PDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQG 365
P+V G +Y + D+ SL + LL G P+ G
Sbjct: 188 PEVL-GPEKY-----------DKSCDMWSLGVIMYILLCGYPPFYSNHG 224
>pdb|4A2C|A Chain A, Crystal Structure Of Galactitol-1-Phosphate Dehydrogenase
From Escherichia Coli
pdb|4A2C|B Chain B, Crystal Structure Of Galactitol-1-Phosphate Dehydrogenase
From Escherichia Coli
Length = 346
Score = 30.0 bits (66), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 29/76 (38%), Gaps = 11/76 (14%)
Query: 317 PDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRL-----------PWQGYQG 365
P V A HA L G+ DL + T +LR L PW G +
Sbjct: 240 PQTVELAVEIAGPHAQLALVGTLHQDLHLTSATFGKILRKELTVIGSWMNYSSPWPGQEW 299
Query: 366 ENKGFLVCKKKMATSP 381
E L+ ++K++ P
Sbjct: 300 ETASRLLTERKLSLEP 315
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 30.0 bits (66), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 44/109 (40%), Gaps = 17/109 (15%)
Query: 260 LEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLA---TKWRDSTTGMHVEYDQR 316
++ +HS H DVKPEN LL P+ L L D G A T TT + Y
Sbjct: 128 IQYLHSINIAHRDVKPEN-LLYTSKRPN-AILKLTDFGFAKETTSHNSLTTPCYTPYYVA 185
Query: 317 PDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQG 365
P+V G +Y + D+ SL + LL G P+ G
Sbjct: 186 PEVL-GPEKY-----------DKSCDMWSLGVIMYILLCGYPPFYSNHG 222
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 29.6 bits (65), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 17/29 (58%)
Query: 252 IAIEAISILEKMHSKGYVHGDVKPENFLL 280
I I+ +E +HSKG +H D+KP N
Sbjct: 169 IFIQIAEAVEFLHSKGLMHRDLKPSNIFF 197
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 29.6 bits (65), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 44/109 (40%), Gaps = 17/109 (15%)
Query: 260 LEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLA---TKWRDSTTGMHVEYDQR 316
++ +HS H DVKPEN LL P+ L L D G A T TT + Y
Sbjct: 130 IQYLHSINIAHRDVKPEN-LLYTSKRPN-AILKLTDFGFAKETTSHNSLTTPCYTPYYVA 187
Query: 317 PDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQG 365
P+V G +Y + D+ SL + LL G P+ G
Sbjct: 188 PEVL-GPEKY-----------DKSCDMWSLGVIMYILLCGYPPFYSNHG 224
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 29.6 bits (65), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 44/109 (40%), Gaps = 17/109 (15%)
Query: 260 LEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLA---TKWRDSTTGMHVEYDQR 316
++ +HS H DVKPEN LL P+ L L D G A T TT + Y
Sbjct: 174 IQYLHSINIAHRDVKPEN-LLYTSKRPN-AILKLTDFGFAKETTSHNSLTTPCYTPYYVA 231
Query: 317 PDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQG 365
P+V G +Y + D+ SL + LL G P+ G
Sbjct: 232 PEVL-GPEKY-----------DKSCDMWSLGVIMYILLCGYPPFYSNHG 268
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 29.6 bits (65), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 44/109 (40%), Gaps = 17/109 (15%)
Query: 260 LEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLA---TKWRDSTTGMHVEYDQR 316
++ +HS H DVKPEN LL P+ L L D G A T TT + Y
Sbjct: 180 IQYLHSINIAHRDVKPEN-LLYTSKRPN-AILKLTDFGFAKETTSHNSLTTPCYTPYYVA 237
Query: 317 PDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQG 365
P+V G +Y + D+ SL + LL G P+ G
Sbjct: 238 PEVL-GPEKY-----------DKSCDMWSLGVIMYILLCGYPPFYSNHG 274
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 29.3 bits (64), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 45/113 (39%), Gaps = 20/113 (17%)
Query: 258 SILEKMHSKGYVHGDVKPENFLLGPPGTPDEKK--LFLVDLGLA--TKWRDSTTGMHVEY 313
+ ++ +HS H DVKPEN L T EK L L D G A T T + Y
Sbjct: 139 TAIQFLHSHNIAHRDVKPENLLY----TSKEKDAVLKLTDFGFAKETTQNALQTPCYTPY 194
Query: 314 DQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGE 366
P+V G +Y + D+ SL + LL G P+ G+
Sbjct: 195 YVAPEVL-GPEKY-----------DKSCDMWSLGVIMYILLCGFPPFYSNTGQ 235
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 29.3 bits (64), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 19/86 (22%), Positives = 39/86 (45%), Gaps = 7/86 (8%)
Query: 224 MVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPP 283
+V ++G L ++ ++ + V + + + L+ +HS +H D+KP N
Sbjct: 100 LVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL----- 152
Query: 284 GTPDEKKLFLVDLGLATKWRDSTTGM 309
++ +L ++D GLA D G
Sbjct: 153 AVNEDCELKILDFGLARHTDDEMAGF 178
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 29.3 bits (64), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 19/85 (22%), Positives = 39/85 (45%), Gaps = 7/85 (8%)
Query: 224 MVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPP 283
+V ++G L ++ ++ + V + + + L+ +HS +H D+KP N
Sbjct: 104 LVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL----- 156
Query: 284 GTPDEKKLFLVDLGLATKWRDSTTG 308
++ +L ++D GLA D G
Sbjct: 157 AVNEDCELKILDFGLARHTDDEMAG 181
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 29.3 bits (64), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 19/85 (22%), Positives = 39/85 (45%), Gaps = 7/85 (8%)
Query: 224 MVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPP 283
+V ++G L ++ ++ + V + + + L+ +HS +H D+KP N
Sbjct: 104 LVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL----- 156
Query: 284 GTPDEKKLFLVDLGLATKWRDSTTG 308
++ +L ++D GLA D G
Sbjct: 157 AVNEDCELKILDFGLARHTDDEMAG 181
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 29.3 bits (64), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 45/113 (39%), Gaps = 20/113 (17%)
Query: 258 SILEKMHSKGYVHGDVKPENFLLGPPGTPDEKK--LFLVDLGLA--TKWRDSTTGMHVEY 313
+ ++ +HS H DVKPEN L T EK L L D G A T T + Y
Sbjct: 120 TAIQFLHSHNIAHRDVKPENLLY----TSKEKDAVLKLTDFGFAKETTQNALQTPCYTPY 175
Query: 314 DQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGE 366
P+V G +Y + D+ SL + LL G P+ G+
Sbjct: 176 YVAPEVL-GPEKY-----------DKSCDMWSLGVIMYILLCGFPPFYSNTGQ 216
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 29.3 bits (64), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 19/85 (22%), Positives = 39/85 (45%), Gaps = 7/85 (8%)
Query: 224 MVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPP 283
+V ++G L ++ ++ + V + + + L+ +HS +H D+KP N
Sbjct: 127 LVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL----- 179
Query: 284 GTPDEKKLFLVDLGLATKWRDSTTG 308
++ +L ++D GLA D G
Sbjct: 180 AVNEDCELKILDFGLARHTDDEMXG 204
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 29.3 bits (64), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 60/158 (37%), Gaps = 22/158 (13%)
Query: 137 GSPMY-------RLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGC 189
GSP Y L R LG+G FG+VY G V N + + VA+K K C
Sbjct: 15 GSPQYGIAREDVVLNRILGEGFFGEVYEG-----VYTNHKG--EKINVAVK---TCKKDC 64
Query: 190 NYGPPYEWQ----VYNTLGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMS 245
++ + L H V + + + +M + G L N +++
Sbjct: 65 TLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEEPTWIIMELYPYG-ELGHYLERNKNSLK 123
Query: 246 IEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPP 283
+ + +++ + + S VH D+ N L+ P
Sbjct: 124 VLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASP 161
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 29.3 bits (64), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 19/85 (22%), Positives = 40/85 (47%), Gaps = 7/85 (8%)
Query: 224 MVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPP 283
+V ++G L ++ ++ + V + + + L+ +HS +H D+KP N +
Sbjct: 124 LVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-- 179
Query: 284 GTPDEKKLFLVDLGLATKWRDSTTG 308
++ +L ++D GLA D G
Sbjct: 180 ---EDCELKILDFGLARHTDDEMXG 201
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 28.9 bits (63), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 40/85 (47%), Gaps = 7/85 (8%)
Query: 224 MVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPP 283
+V ++G L ++ ++ + V + + + L+ +HS +H D+KP N
Sbjct: 104 LVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL----- 156
Query: 284 GTPDEKKLFLVDLGLATKWRDSTTG 308
++ +L ++D GLA D TG
Sbjct: 157 AVNEDCELKILDGGLARHTDDEMTG 181
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 28.9 bits (63), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 15/65 (23%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Query: 220 DYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFL 279
+ +V++ + G +L D+ + ++ E +A + + L +H++G +H D+K ++ L
Sbjct: 116 ELWVLMEFLQGGALTDIVSQVR--LNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSIL 173
Query: 280 LGPPG 284
L G
Sbjct: 174 LTLDG 178
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.135 0.420
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,751,758
Number of Sequences: 62578
Number of extensions: 956168
Number of successful extensions: 3022
Number of sequences better than 100.0: 595
Number of HSP's better than 100.0 without gapping: 185
Number of HSP's successfully gapped in prelim test: 410
Number of HSP's that attempted gapping in prelim test: 2557
Number of HSP's gapped (non-prelim): 753
length of query: 708
length of database: 14,973,337
effective HSP length: 106
effective length of query: 602
effective length of database: 8,340,069
effective search space: 5020721538
effective search space used: 5020721538
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)