Query         005221
Match_columns 708
No_of_seqs    575 out of 3015
Neff          7.8 
Searched_HMMs 29240
Date          Mon Mar 25 19:02:18 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005221.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/005221hhsearch_pdb -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 4fih_A Serine/threonine-protei 100.0 1.6E-55 5.5E-60  473.2  27.5  256  140-444    75-331 (346)
  2 4b9d_A Serine/threonine-protei 100.0 3.3E-56 1.1E-60  479.3  21.5  264  132-444    17-284 (350)
  3 4aw0_A HPDK1, 3-phosphoinositi 100.0   3E-56   1E-60  472.1  20.7  257  139-444    32-298 (311)
  4 3hyh_A Carbon catabolite-derep 100.0 2.2E-55 7.4E-60  458.9  23.2  253  139-443    13-269 (275)
  5 4fie_A Serine/threonine-protei 100.0 7.5E-55 2.6E-59  479.2  28.2  257  139-444   151-408 (423)
  6 3ubd_A Ribosomal protein S6 ki 100.0 1.3E-54 4.3E-59  459.2  19.0  257  139-443    24-288 (304)
  7 3fpq_A Serine/threonine-protei 100.0 2.2E-53 7.4E-58  447.4  25.2  254  139-442    25-288 (290)
  8 4b99_A Mitogen-activated prote 100.0 7.5E-54 2.6E-58  470.9  22.1  287  138-444    53-352 (398)
  9 4g3f_A NF-kappa-beta-inducing  100.0 7.7E-53 2.6E-57  451.0  27.8  255  139-440    58-313 (336)
 10 4g31_A Eukaryotic translation  100.0 2.5E-51 8.5E-56  434.5  18.7  261  140-442     6-285 (299)
 11 4f9c_A Cell division cycle 7-r 100.0 1.4E-50 4.8E-55  439.8  23.5  287  139-442    21-358 (361)
 12 4asz_A BDNF/NT-3 growth factor 100.0   5E-51 1.7E-55  431.8  18.4  260  139-419    13-286 (299)
 13 3omv_A RAF proto-oncogene seri 100.0 4.9E-50 1.7E-54  425.0  22.4  255  138-439    35-296 (307)
 14 3uto_A Twitchin; kinase, muscl 100.0 2.3E-50 7.9E-55  463.5  21.5  262  139-445   157-419 (573)
 15 4aoj_A High affinity nerve gro 100.0 7.9E-50 2.7E-54  428.3  23.2  258  139-438    41-314 (329)
 16 4gt4_A Tyrosine-protein kinase 100.0 3.8E-49 1.3E-53  419.2  22.8  258  139-438    26-301 (308)
 17 3v5w_A G-protein coupled recep 100.0 1.5E-48 5.1E-53  448.0  24.4  257  138-444   188-457 (689)
 18 4ase_A Vascular endothelial gr 100.0 1.4E-48 4.7E-53  422.2  21.7  261  138-438    63-342 (353)
 19 3hmm_A TGF-beta receptor type- 100.0 4.5E-47 1.6E-51  402.9  20.7  264  139-438     3-292 (303)
 20 3fe3_A MAP/microtubule affinit 100.0   2E-45 6.7E-50  394.7  24.5  255  139-445    15-273 (328)
 21 3zgw_A Maternal embryonic leuc 100.0 3.8E-45 1.3E-49  395.5  25.6  257  138-444     9-268 (347)
 22 2yab_A Death-associated protei 100.0   3E-45   1E-49  398.4  23.8  260  139-442    12-278 (361)
 23 3fxz_A Serine/threonine-protei 100.0 5.8E-45   2E-49  385.0  24.7  258  139-445    20-278 (297)
 24 3txo_A PKC-L, NPKC-ETA, protei 100.0   2E-45 6.8E-50  398.7  21.1  256  138-443    22-287 (353)
 25 3niz_A Rhodanese family protei 100.0 1.1E-44 3.9E-49  385.3  26.2  279  137-443    19-307 (311)
 26 1o6l_A RAC-beta serine/threoni 100.0 7.6E-45 2.6E-49  391.6  24.5  254  139-443     5-267 (337)
 27 1tki_A Titin; serine kinase, m 100.0 3.8E-45 1.3E-49  391.1  21.6  261  138-444     4-265 (321)
 28 3gbz_A Kinase, CMGC CDK; ssgci 100.0 7.9E-45 2.7E-49  389.4  23.4  276  139-443    34-325 (329)
 29 3h4j_B AMPK kdaid, SNF1-like p 100.0 8.1E-45 2.8E-49  391.2  23.5  254  139-444     9-266 (336)
 30 3o0g_A Cell division protein k 100.0 2.1E-44 7.2E-49  378.8  25.9  279  139-442     2-288 (292)
 31 3g33_A Cell division protein k 100.0 2.5E-44 8.5E-49  381.2  26.0  272  138-444     8-304 (308)
 32 3ttj_A Mitogen-activated prote 100.0 3.7E-45 1.3E-49  410.9  20.4  279  138-444    61-363 (464)
 33 3mtl_A Cell division protein k 100.0 2.7E-44 9.2E-49  384.5  25.2  280  139-445     2-290 (324)
 34 2bdw_A Hypothetical protein K1 100.0 1.7E-44 5.8E-49  392.6  23.9  260  139-443    29-291 (362)
 35 2w4o_A Calcium/calmodulin-depe 100.0 9.6E-45 3.3E-49  392.5  21.7  259  139-444    53-313 (349)
 36 4dc2_A Protein kinase C IOTA t 100.0 4.6E-44 1.6E-48  393.5  27.3  263  138-443    51-325 (396)
 37 1ob3_A PFPK5, cell division co 100.0 2.7E-44 9.2E-49  377.5  24.1  277  139-442     2-286 (288)
 38 3rp9_A Mitogen-activated prote 100.0 6.9E-45 2.4E-49  407.7  20.9  292  138-445    52-405 (458)
 39 3soa_A Calcium/calmodulin-depe 100.0 1.2E-44 4.2E-49  404.1  22.8  261  139-443    11-274 (444)
 40 2i0e_A Protein kinase C-beta I 100.0 1.7E-44 5.8E-49  391.3  23.2  256  138-443    19-283 (353)
 41 3oz6_A Mitogen-activated prote 100.0 6.6E-45 2.2E-49  399.0  20.1  289  139-445     9-337 (388)
 42 4aw2_A Serine/threonine-protei 100.0 3.5E-44 1.2E-48  399.5  24.5  263  138-445    73-347 (437)
 43 1xjd_A Protein kinase C, theta 100.0 2.5E-44 8.5E-49  388.8  22.2  255  138-443    16-276 (345)
 44 2y0a_A Death-associated protei 100.0 6.5E-44 2.2E-48  382.1  25.1  260  139-442    11-277 (326)
 45 2pmi_A Negative RE, cyclin-dep 100.0 2.3E-44   8E-49  383.8  21.4  278  138-444     4-301 (317)
 46 1kob_A Twitchin; kinase, intra 100.0 2.9E-44 9.8E-49  394.3  22.6  261  139-444    51-312 (387)
 47 2qr7_A Ribosomal protein S6 ki 100.0 7.4E-44 2.5E-48  384.7  25.3  257  139-442    22-283 (342)
 48 1fot_A TPK1 delta, CAMP-depend 100.0 4.6E-44 1.6E-48  382.4  23.3  251  139-443     6-265 (318)
 49 3mi9_A Cell division protein k 100.0 8.9E-44   3E-48  384.2  25.0  280  138-444    16-319 (351)
 50 3tki_A Serine/threonine-protei 100.0 9.6E-44 3.3E-48  380.4  24.7  262  138-445     6-270 (323)
 51 1nxk_A MAP kinase-activated pr 100.0 1.3E-43 4.5E-48  390.8  26.5  258  140-445    62-330 (400)
 52 1cm8_A Phosphorylated MAP kina 100.0 1.7E-44 5.9E-49  393.2  19.2  279  138-444    24-315 (367)
 53 2izr_A Casein kinase I isoform 100.0 1.6E-43 5.4E-48  379.1  26.2  217  139-368     9-225 (330)
 54 3c0i_A Peripheral plasma membr 100.0 6.3E-44 2.2E-48  386.3  23.0  261  139-443    24-293 (351)
 55 3uc3_A Serine/threonine-protei 100.0   2E-43   7E-48  383.9  27.0  260  137-444    18-282 (361)
 56 1csn_A Casein kinase-1; phosph 100.0 5.4E-43 1.8E-47  368.0  29.3  266  139-438    10-278 (298)
 57 1rdq_E PKA C-alpha, CAMP-depen 100.0 6.8E-44 2.3E-48  386.2  23.0  251  139-443    41-300 (350)
 58 2vd5_A DMPK protein; serine/th 100.0 4.7E-44 1.6E-48  395.6  21.9  263  138-445    60-336 (412)
 59 3v8s_A RHO-associated protein  100.0   7E-44 2.4E-48  393.9  23.0  259  138-444    68-337 (410)
 60 2zv2_A Calcium/calmodulin-depe 100.0 1.2E-43   4E-48  374.2  23.7  253  139-441    13-297 (298)
 61 3llt_A Serine/threonine kinase 100.0 6.2E-44 2.1E-48  386.5  22.0  280  138-441    34-360 (360)
 62 3a62_A Ribosomal protein S6 ki 100.0 1.5E-43 5.2E-48  379.4  24.8  256  139-442    17-282 (327)
 63 4ejn_A RAC-alpha serine/threon 100.0 7.9E-44 2.7E-48  397.9  22.9  254  139-443   148-411 (446)
 64 3n9x_A Phosphotransferase; mal 100.0 1.2E-43   4E-48  395.1  23.8  292  138-445    25-370 (432)
 65 3a8x_A Protein kinase C IOTA t 100.0 1.9E-43 6.4E-48  382.0  24.6  262  139-443     9-282 (345)
 66 4hgt_A Casein kinase I isoform 100.0 8.6E-43 2.9E-47  365.8  28.8  262  138-438     8-275 (296)
 67 3kk8_A Calcium/calmodulin depe 100.0 4.6E-43 1.6E-47  366.3  25.7  263  138-445     5-270 (284)
 68 3qyz_A Mitogen-activated prote 100.0 2.3E-43 7.8E-48  383.4  23.8  286  137-444    25-321 (364)
 69 3uzp_A CKI-delta, CKID, casein 100.0 1.8E-42   6E-47  363.7  29.6  265  138-438     8-275 (296)
 70 3i6u_A CDS1, serine/threonine- 100.0 3.5E-43 1.2E-47  389.7  25.2  259  139-443   135-406 (419)
 71 2r5t_A Serine/threonine-protei 100.0 2.9E-43 9.8E-48  384.5  24.0  256  138-444    37-301 (373)
 72 1j1b_A Glycogen synthase kinas 100.0 3.8E-43 1.3E-47  389.6  25.2  268  140-444    55-344 (420)
 73 2fst_X Mitogen-activated prote 100.0 3.6E-44 1.2E-48  390.8  16.0  279  138-444    28-319 (367)
 74 3gni_B Strad alpha; kinase fol 100.0 5.3E-43 1.8E-47  383.8  25.0  290  137-445    23-342 (389)
 75 2x4f_A Myosin light chain kina 100.0 2.1E-43 7.2E-48  385.6  21.7  260  140-444    88-350 (373)
 76 3f3z_A Calcium/calmodulin-depe 100.0 4.7E-43 1.6E-47  365.1  23.1  261  139-445     9-270 (277)
 77 3eb0_A Putative uncharacterize 100.0 5.5E-43 1.9E-47  383.2  24.6  270  138-444     6-329 (383)
 78 2eue_A Carbon catabolite derep 100.0 1.4E-43   5E-48  368.9  18.9  254  139-444    13-270 (275)
 79 3mwu_A Calmodulin-domain prote 100.0 4.4E-43 1.5E-47  396.2  24.4  261  139-445    22-285 (486)
 80 4fr4_A YANK1, serine/threonine 100.0 5.1E-43 1.8E-47  383.7  24.0  257  138-443    14-278 (384)
 81 3p1a_A MYT1 kinase, membrane-a 100.0 4.6E-43 1.6E-47  372.7  23.0  251  139-442    57-310 (311)
 82 2c30_A Serine/threonine-protei 100.0 1.3E-42 4.4E-47  371.3  26.3  254  140-443    46-301 (321)
 83 1ua2_A CAK, cell division prot 100.0 5.2E-43 1.8E-47  378.0  23.3  278  138-444     9-299 (346)
 84 3dbq_A Dual specificity protei 100.0 6.4E-43 2.2E-47  376.8  23.9  261  137-444     7-281 (343)
 85 3is5_A Calcium-dependent prote 100.0 5.6E-43 1.9E-47  367.1  22.6  258  139-442    22-284 (285)
 86 2a2a_A Death-associated protei 100.0   8E-43 2.8E-47  372.2  24.1  260  139-442    12-278 (321)
 87 1vzo_A Ribosomal protein S6 ki 100.0 3.2E-43 1.1E-47  381.4  21.1  264  137-443    52-328 (355)
 88 2xrw_A Mitogen-activated prote 100.0 3.4E-43 1.2E-47  383.3  21.2  277  139-443    25-325 (371)
 89 3lij_A Calcium/calmodulin depe 100.0 7.5E-43 2.6E-47  395.1  24.5  259  139-443    37-298 (494)
 90 3kvw_A DYRK2, dual specificity 100.0 4.8E-43 1.6E-47  389.8  22.5  280  138-444    96-416 (429)
 91 2zmd_A Dual specificity protei 100.0 8.1E-43 2.8E-47  383.2  23.9  260  138-444    55-328 (390)
 92 3pfq_A PKC-B, PKC-beta, protei 100.0 3.9E-43 1.3E-47  411.4  22.5  256  138-443   340-604 (674)
 93 2y94_A 5'-AMP-activated protei 100.0 9.2E-43 3.2E-47  391.9  24.4  255  139-445    16-275 (476)
 94 3lm5_A Serine/threonine-protei 100.0 4.8E-43 1.6E-47  375.3  20.7  264  139-445    28-296 (327)
 95 2ac3_A MAP kinase-interacting  100.0 7.4E-43 2.5E-47  370.7  21.9  279  138-443    11-302 (316)
 96 3pg1_A Mitogen-activated prote 100.0 6.4E-43 2.2E-47  378.8  21.7  282  138-444    21-324 (362)
 97 2owb_A Serine/threonine-protei 100.0 1.4E-42 4.9E-47  372.8  24.2  261  136-447    38-302 (335)
 98 1z57_A Dual specificity protei 100.0 7.2E-43 2.5E-47  372.9  21.7  285  138-444    13-336 (339)
 99 3kn6_A Ribosomal protein S6 ki 100.0 3.7E-43 1.3E-47  376.2  19.3  260  140-444     9-278 (325)
100 3nyv_A Calmodulin-domain prote 100.0 5.8E-43   2E-47  394.8  21.7  260  139-444    26-289 (484)
101 3sv0_A Casein kinase I-like; t 100.0 2.5E-42 8.5E-47  389.1  26.6  269  139-422     7-278 (483)
102 1wak_A Serine/threonine-protei 100.0 6.3E-43 2.1E-47  382.4  21.0  278  138-441    36-396 (397)
103 4agu_A Cyclin-dependent kinase 100.0 2.2E-42 7.7E-47  366.1  24.3  273  139-445     3-293 (311)
104 4euu_A Serine/threonine-protei 100.0   2E-42 6.8E-47  368.6  24.0  277  138-439     8-305 (319)
105 2vx3_A Dual specificity tyrosi 100.0 1.1E-42 3.7E-47  380.7  21.7  279  138-443    53-379 (382)
106 1u5q_A Serine/threonine protei 100.0 2.8E-42 9.7E-47  373.1  24.6  254  139-444    54-313 (348)
107 3hko_A Calcium/calmodulin-depe 100.0 1.1E-42 3.9E-47  373.9  21.2  266  139-444    26-338 (345)
108 2jam_A Calcium/calmodulin-depe 100.0 3.2E-42 1.1E-46  364.2  24.3  260  139-444     9-269 (304)
109 2eu9_A Dual specificity protei 100.0 1.1E-42 3.9E-47  374.2  21.2  283  138-443    18-340 (355)
110 3q5i_A Protein kinase; CDPK, m 100.0 1.7E-42 5.8E-47  393.2  23.6  260  139-444    36-309 (504)
111 3fdn_A Serine/threonine-protei 100.0 1.7E-42 5.8E-47  361.6  21.6  254  139-445     9-266 (279)
112 3nsz_A CK II alpha, casein kin 100.0   4E-42 1.4E-46  367.3  24.9  279  135-444    32-327 (330)
113 2b9h_A MAP kinase FUS3, mitoge 100.0 4.2E-42 1.4E-46  370.7  24.4  297  131-444     3-313 (353)
114 2acx_A G protein-coupled recep 100.0 1.9E-42 6.6E-47  395.7  22.9  259  138-443   183-451 (576)
115 4exu_A Mitogen-activated prote 100.0 1.5E-42   5E-47  378.3  20.7  276  139-443    42-330 (371)
116 3bhy_A Death-associated protei 100.0 5.5E-42 1.9E-46  357.9  24.0  263  139-445     5-274 (283)
117 3ork_A Serine/threonine protei 100.0   1E-42 3.5E-47  369.7  18.6  264  138-444    11-281 (311)
118 2r3i_A Cell division protein k 100.0 7.9E-42 2.7E-46  359.6  25.3  272  139-444     3-291 (299)
119 4eqm_A Protein kinase; transfe 100.0 4.9E-42 1.7E-46  361.9  23.7  261  138-443    10-274 (294)
120 2ycf_A Serine/threonine-protei 100.0 3.3E-42 1.1E-46  367.4  22.6  259  139-443    10-281 (322)
121 4e7w_A Glycogen synthase kinas 100.0   5E-42 1.7E-46  377.4  24.6  267  139-444    40-329 (394)
122 3qd2_B Eukaryotic translation  100.0 2.5E-42 8.4E-47  368.1  21.4  262  139-442     6-331 (332)
123 4aaa_A Cyclin-dependent kinase 100.0 4.2E-42 1.4E-46  368.2  23.1  279  133-444    19-314 (331)
124 3cok_A Serine/threonine-protei 100.0 1.9E-42 6.6E-47  360.7  19.7  255  139-443    11-269 (278)
125 3c4z_A Rhodopsin kinase; Ser/T 100.0 4.9E-42 1.7E-46  391.0  24.5  260  138-443   184-455 (543)
126 3q60_A ROP5B; pseudokinase, tr 100.0 9.1E-43 3.1E-47  379.7  17.5  258  140-444    63-360 (371)
127 3dls_A PAS domain-containing s 100.0 9.1E-42 3.1E-46  367.1  25.0  248  139-444    24-282 (335)
128 3a7i_A MST3 kinase, serine/thr 100.0 1.1E-41 3.9E-46  359.6  25.1  259  136-445    19-279 (303)
129 1blx_A Cyclin-dependent kinase 100.0 2.1E-41 7.1E-46  360.9  27.2  278  139-444    11-304 (326)
130 3op5_A Serine/threonine-protei 100.0 5.2E-42 1.8E-46  372.7  22.8  271  137-437    33-323 (364)
131 2vgo_A Serine/threonine-protei 100.0 6.1E-42 2.1E-46  358.3  22.3  254  139-445    14-271 (284)
132 3rgf_A Cyclin-dependent kinase 100.0 2.1E-42   7E-47  381.5  19.6  288  140-444    21-341 (405)
133 3e3p_A Protein kinase, putativ 100.0 1.4E-41 4.7E-46  367.6  25.6  276  139-445    23-323 (360)
134 3eqc_A Dual specificity mitoge 100.0   3E-42   1E-46  373.5  19.9  280  138-444    32-332 (360)
135 2rku_A Serine/threonine-protei 100.0 1.5E-41 5.1E-46  357.2  24.5  259  136-445    12-274 (294)
136 3byv_A Rhoptry kinase; malaria 100.0 2.1E-43 7.2E-48  385.7  10.2  247  138-443    72-366 (377)
137 2y7j_A Phosphorylase B kinase  100.0 9.9E-42 3.4E-46  371.1  23.3  255  139-441    94-364 (365)
138 2x7f_A TRAF2 and NCK-interacti 100.0 2.3E-41 7.7E-46  360.9  25.6  259  137-443    22-293 (326)
139 1x8b_A WEE1HU, WEE1-like prote 100.0 1.2E-41 4.2E-46  354.8  22.7  254  139-443    11-286 (289)
140 2i6l_A Mitogen-activated prote 100.0 4.5E-42 1.5E-46  364.1  19.4  282  138-444    10-313 (320)
141 1t4h_A Serine/threonine-protei 100.0 2.1E-41 7.3E-46  355.2  24.3  255  138-442    25-288 (290)
142 3kex_A Receptor tyrosine-prote 100.0 2.4E-41 8.3E-46  361.5  24.9  258  138-439    12-272 (325)
143 3s95_A LIMK-1, LIM domain kina 100.0 8.6E-42 2.9E-46  362.0  21.1  213  138-366     9-228 (310)
144 2h6d_A 5'-AMP-activated protei 100.0 1.6E-41 5.6E-46  353.0  22.7  254  139-444    11-269 (276)
145 1phk_A Phosphorylase kinase; g 100.0   2E-41 6.8E-46  356.4  23.2  258  138-443    16-290 (298)
146 3kul_A Ephrin type-A receptor  100.0 6.7E-42 2.3E-46  366.3  20.0  270  139-430    49-321 (325)
147 2yex_A Serine/threonine-protei 100.0 1.3E-41 4.4E-46  353.5  21.3  261  139-445     7-270 (276)
148 2wei_A Calmodulin-domain prote 100.0 2.7E-41 9.1E-46  354.2  23.7  259  139-443    22-283 (287)
149 3com_A Serine/threonine-protei 100.0 2.8E-41 9.7E-46  358.2  23.9  259  138-445    28-287 (314)
150 3vhe_A Vascular endothelial gr 100.0 8.3E-42 2.8E-46  369.2  20.0  262  138-439    21-351 (359)
151 3coi_A Mitogen-activated prote 100.0 5.4E-42 1.9E-46  370.7  17.8  276  139-443    24-312 (353)
152 3l9p_A Anaplastic lymphoma kin 100.0   4E-42 1.4E-46  374.5  16.6  266  138-442    70-344 (367)
153 3fme_A Dual specificity mitoge 100.0 1.8E-41 6.2E-46  355.0  20.6  258  139-444     7-274 (290)
154 3poz_A Epidermal growth factor 100.0   3E-41   1E-45  361.4  22.5  259  137-439    13-274 (327)
155 4hcu_A Tyrosine-protein kinase 100.0 1.9E-41 6.4E-46  351.8  20.1  252  138-439     9-262 (269)
156 1q8y_A SR protein kinase; tran 100.0 1.2E-41   4E-46  369.7  19.1  280  138-444    18-341 (373)
157 2j7t_A Serine/threonine-protei 100.0 1.2E-41 4.1E-46  358.7  18.5  261  137-444    17-283 (302)
158 3an0_A Dual specificity mitoge 100.0 2.5E-41 8.4E-46  363.2  21.2  260  138-445    50-319 (340)
159 3sxs_A Cytoplasmic tyrosine-pr 100.0 2.6E-41   9E-46  350.2  20.6  252  138-439     7-260 (268)
160 2wtk_C Serine/threonine-protei 100.0   3E-41   1E-45  356.2  21.3  260  139-445     5-272 (305)
161 3gen_A Tyrosine-protein kinase 100.0 2.3E-41 7.7E-46  353.5  19.9  252  138-439    23-276 (283)
162 3p86_A Serine/threonine-protei 100.0   8E-41 2.7E-45  355.5  24.2  250  138-437    36-292 (309)
163 2vwi_A Serine/threonine-protei 100.0 1.8E-41 6.1E-46  357.0  17.7  272  138-444    14-295 (303)
164 3fhr_A MAP kinase-activated pr 100.0 8.2E-41 2.8E-45  359.6  23.0  261  138-444    27-295 (336)
165 2psq_A Fibroblast growth facto 100.0 9.3E-41 3.2E-45  364.2  23.6  261  138-438    80-359 (370)
166 4f0f_A Serine/threonine-protei 100.0 2.1E-40 7.2E-45  346.9  25.2  256  137-438    17-284 (287)
167 2w5a_A Serine/threonine-protei 100.0 1.4E-41 4.8E-46  354.1  16.1  257  139-443     6-274 (279)
168 3lb7_A RAF proto-oncogene seri 100.0 1.5E-40 5.2E-45  353.0  24.2  258  137-441    34-298 (307)
169 3cek_A Dual specificity protei 100.0 1.9E-40 6.5E-45  352.1  23.8  261  137-444    26-300 (313)
170 3soc_A Activin receptor type-2 100.0 3.9E-41 1.3E-45  359.6  18.4  265  138-439    23-314 (322)
171 3ll6_A Cyclin G-associated kin 100.0 6.3E-41 2.2E-45  357.9  19.8  260  138-440    27-305 (337)
172 1zy4_A Serine/threonine-protei 100.0 4.2E-41 1.4E-45  353.5  18.0  265  139-443     6-290 (303)
173 2jii_A Serine/threonine-protei 100.0 1.8E-40 6.1E-45  358.8  23.3  277  137-439    40-332 (352)
174 3qup_A Tyrosine-protein kinase 100.0 8.2E-41 2.8E-45  356.3  19.8  262  138-442    22-304 (323)
175 1mp8_A Focal adhesion kinase 1 100.0 1.2E-40 4.2E-45  348.1  20.6  256  138-439    14-272 (281)
176 2qkw_B Protein kinase; three-h 100.0 4.7E-41 1.6E-45  358.3  17.7  272  137-441    37-313 (321)
177 3p23_A Serine/threonine-protei 100.0 1.2E-40 4.2E-45  370.8  21.6  263  137-442    22-289 (432)
178 3ugc_A Tyrosine-protein kinase 100.0 7.8E-41 2.7E-45  351.8  18.5  274  138-438     9-286 (295)
179 2clq_A Mitogen-activated prote 100.0 1.8E-40 6.2E-45  348.2  21.1  257  141-444    24-286 (295)
180 4fvq_A Tyrosine-protein kinase 100.0 4.2E-41 1.4E-45  352.3  16.1  258  138-438     7-270 (289)
181 3og7_A AKAP9-BRAF fusion prote 100.0 1.9E-40 6.6E-45  348.3  20.6  254  138-438    23-283 (289)
182 1u59_A Tyrosine-protein kinase 100.0 2.1E-40 7.2E-45  347.4  20.8  256  139-439     9-268 (287)
183 1k9a_A Carboxyl-terminal SRC k 100.0 7.1E-40 2.4E-44  366.5  26.5  246  137-437   191-439 (450)
184 3cbl_A C-FES, proto-oncogene t 100.0 1.3E-40 4.4E-45  363.8  19.8  255  137-438   112-369 (377)
185 2xir_A Vascular endothelial gr 100.0 1.4E-40 4.8E-45  352.6  19.5  262  138-439    26-306 (316)
186 2ivs_A Proto-oncogene tyrosine 100.0 1.5E-40 5.1E-45  352.1  19.3  259  138-438    22-306 (314)
187 3a99_A Proto-oncogene serine/t 100.0 5.6E-40 1.9E-44  350.4  23.8  250  137-444    41-301 (320)
188 3dtc_A Mitogen-activated prote 100.0 4.5E-40 1.5E-44  341.2  22.4  252  138-438     6-268 (271)
189 1rjb_A FL cytokine receptor; k 100.0 7.9E-40 2.7E-44  351.8  25.1  262  138-440    44-331 (344)
190 3f66_A Hepatocyte growth facto 100.0 4.9E-40 1.7E-44  346.0  22.7  260  138-438    24-286 (298)
191 3cc6_A Protein tyrosine kinase 100.0 4.8E-40 1.6E-44  343.4  22.1  256  138-439    11-269 (281)
192 4e5w_A Tyrosine-protein kinase 100.0 8.8E-40   3E-44  344.5  24.2  272  139-438    21-297 (302)
193 3lzb_A Epidermal growth factor 100.0 5.4E-40 1.8E-44  351.9  22.8  259  137-439    13-274 (327)
194 1luf_A Muscle-specific tyrosin 100.0 2.5E-40 8.6E-45  355.0  19.9  259  138-438    46-330 (343)
195 4eut_A Serine/threonine-protei 100.0 2.1E-40 7.3E-45  364.5  19.1  271  138-439     8-305 (396)
196 2v62_A Serine/threonine-protei 100.0 4.7E-40 1.6E-44  354.7  21.3  275  137-438    35-323 (345)
197 3tt0_A Basic fibroblast growth 100.0 1.2E-39 3.9E-44  356.8  24.3  262  138-439    68-348 (382)
198 1fvr_A Tyrosine-protein kinase 100.0 1.4E-39 4.7E-44  347.9  24.1  253  138-440    24-297 (327)
199 2yfx_A Tyrosine-protein kinase 100.0 1.8E-40 6.1E-45  354.8  17.0  266  138-442    29-303 (327)
200 3t9t_A Tyrosine-protein kinase 100.0 4.6E-40 1.6E-44  340.1  19.5  252  138-439     7-260 (267)
201 3e7e_A HBUB1, BUB1A, mitotic c 100.0 7.1E-40 2.4E-44  355.9  21.9  259  136-439    62-334 (365)
202 1p4o_A Insulin-like growth fac 100.0 4.4E-40 1.5E-44  350.3  19.5  259  138-438    24-294 (322)
203 2iwi_A Serine/threonine-protei 100.0 1.3E-39 4.3E-44  345.4  22.7  248  138-444    30-291 (312)
204 3aln_A Dual specificity mitoge 100.0 5.2E-40 1.8E-44  350.9  19.6  262  137-444    20-293 (327)
205 3c1x_A Hepatocyte growth facto 100.0 6.3E-40 2.1E-44  358.1  20.4  260  139-439    89-351 (373)
206 2a19_B Interferon-induced, dou 100.0 3.3E-39 1.1E-43  336.5  24.7  245  139-441    11-272 (284)
207 2pml_X PFPK7, Ser/Thr protein  100.0 4.4E-40 1.5E-44  354.1  18.6  270  139-443    31-329 (348)
208 3q4u_A Activin receptor type-1 100.0 1.4E-39 4.8E-44  342.5  21.4  261  138-438     7-297 (301)
209 3pls_A Macrophage-stimulating  100.0 2.6E-39 8.8E-44  340.0  23.3  258  140-438    22-282 (298)
210 2dyl_A Dual specificity mitoge 100.0 1.2E-39 4.1E-44  345.7  20.5  259  138-444    24-291 (318)
211 3g2f_A Bone morphogenetic prot 100.0   5E-40 1.7E-44  352.0  17.5  269  138-439    12-314 (336)
212 1t46_A HOMO sapiens V-KIT hard 100.0 2.6E-39 8.9E-44  342.3  22.8  261  138-439    22-303 (313)
213 2qol_A Ephrin receptor; recept 100.0 3.8E-40 1.3E-44  359.8  16.7  258  138-438    44-304 (373)
214 3kfa_A Tyrosine-protein kinase 100.0 1.5E-39 5.2E-44  340.2  20.6  252  138-438    12-266 (288)
215 1qcf_A Haematopoetic cell kina 100.0 1.6E-39 5.3E-44  364.1  21.5  250  137-437   186-438 (454)
216 1byg_A CSK, protein (C-termina 100.0 1.6E-39 5.3E-44  338.9  20.0  246  138-438    20-268 (278)
217 3uim_A Brassinosteroid insensi 100.0 1.1E-39 3.9E-44  347.9  19.3  268  136-439    27-307 (326)
218 2h34_A Serine/threonine-protei 100.0 3.3E-39 1.1E-43  342.5  22.5  251  139-436    34-289 (309)
219 2wqm_A Serine/threonine-protei 100.0   1E-38 3.5E-43  338.1  25.8  257  137-439    30-293 (310)
220 1mqb_A Ephrin type-A receptor  100.0 4.5E-39 1.5E-43  345.5  23.3  260  138-439    43-305 (333)
221 3lxl_A Tyrosine-protein kinase 100.0 9.7E-40 3.3E-44  349.0  18.0  274  138-439    22-299 (327)
222 1xbb_A Tyrosine-protein kinase 100.0 3.1E-39 1.1E-43  339.2  21.5  254  138-437    15-273 (291)
223 2rio_A Serine/threonine-protei 100.0 1.3E-39 4.4E-44  362.8  19.3  265  138-442    14-301 (434)
224 2buj_A Serine/threonine-protei 100.0 2.8E-39 9.5E-44  343.3  20.4  268  133-439    23-302 (317)
225 1u46_A ACK-1, activated CDC42  100.0 1.2E-39   4E-44  341.4  17.1  260  136-438    15-279 (291)
226 2eva_A TAK1 kinase - TAB1 chim 100.0 6.6E-39 2.3E-43  340.0  23.1  247  138-439     7-259 (307)
227 1qpc_A LCK kinase; alpha beta  100.0 4.2E-39 1.4E-43  335.6  21.0  249  138-437    12-263 (279)
228 3lxp_A Non-receptor tyrosine-p 100.0 1.9E-39 6.6E-44  345.7  18.7  269  140-438    32-305 (318)
229 1opk_A P150, C-ABL, proto-onco 100.0 2.6E-39 8.9E-44  366.3  20.4  256  138-421   219-477 (495)
230 1fmk_A C-SRC, P60-SRC, tyrosin 100.0   6E-39   2E-43  359.2  23.0  254  137-420   182-438 (452)
231 3dzo_A Rhoptry kinase domain;  100.0 3.3E-40 1.1E-44  365.2  12.3  248  140-444    79-371 (413)
232 3brb_A Proto-oncogene tyrosine 100.0 1.1E-38 3.8E-43  338.3  23.4  259  138-439    33-304 (313)
233 2i1m_A Macrophage colony-stimu 100.0 6.2E-39 2.1E-43  343.3  21.3  262  137-439    44-322 (333)
234 2pvf_A Fibroblast growth facto 100.0 7.1E-39 2.4E-43  343.6  21.2  262  138-439    34-314 (334)
235 2ozo_A Tyrosine-protein kinase 100.0 2.1E-38 7.1E-43  367.7  26.9  260  138-442   334-600 (613)
236 3kmu_A ILK, integrin-linked ki 100.0 9.3E-39 3.2E-43  330.4  19.6  246  139-438    10-265 (271)
237 2nru_A Interleukin-1 receptor- 100.0 2.2E-38 7.4E-43  334.9  21.2  261  140-438    32-301 (307)
238 3mdy_A Bone morphogenetic prot 100.0   3E-38   1E-42  337.8  22.0  261  139-439    37-327 (337)
239 2h8h_A Proto-oncogene tyrosine 100.0 1.5E-38 5.2E-43  363.4  20.4  253  138-420   266-521 (535)
240 2w1i_A JAK2; chromosomal rearr 100.0 1.5E-38 5.1E-43  339.9  18.7  273  139-438    41-317 (326)
241 4fl3_A Tyrosine-protein kinase 100.0 4.6E-38 1.6E-42  366.1  24.2  251  141-437   370-625 (635)
242 1b6c_B TGF-B superfamily recep 100.0 3.2E-38 1.1E-42  338.5  20.2  262  138-439    41-332 (342)
243 2y4i_B KSR2, HKSR2, kinase sup 100.0 3.4E-38 1.2E-42  334.9  19.9  255  137-438    31-297 (319)
244 3m2w_A MAP kinase-activated pr 100.0   4E-37 1.4E-41  324.8  26.5  242  139-445    17-265 (299)
245 3gxj_A TGF-beta receptor type- 100.0 8.4E-40 2.9E-44  344.2   5.3  256  139-438     3-292 (303)
246 3qa8_A MGC80376 protein; kinas 100.0   2E-39 6.7E-44  374.8   7.8  271  139-443    14-304 (676)
247 2j0j_A Focal adhesion kinase 1 100.0 2.9E-37 9.8E-42  360.7  23.3  255  138-438   389-646 (656)
248 2vuw_A Serine/threonine-protei 100.0 4.5E-38 1.5E-42  337.6  11.3  251  139-441    20-336 (336)
249 2pzi_A Probable serine/threoni 100.0 3.5E-37 1.2E-41  362.1  16.4  241  139-442    80-326 (681)
250 3uqc_A Probable conserved tran 100.0   2E-35 6.9E-40  310.6  22.6  225  139-439    31-261 (286)
251 4azs_A Methyltransferase WBDD; 100.0 5.6E-31 1.9E-35  302.4  12.3  186  146-359   241-437 (569)
252 3en9_A Glycoprotease, O-sialog  99.9 5.9E-26   2E-30  259.1   7.5  191  141-361   338-539 (540)
253 1zar_A RIO2 kinase; serine kin  99.9 2.6E-23   9E-28  217.9  12.7  144  139-333    90-252 (282)
254 1zth_A RIO1 serine protein kin  99.8 5.4E-21 1.9E-25  197.5  11.3  138  140-302    48-219 (258)
255 4gyi_A RIO2 kinase; protein ki  99.7 1.7E-17 5.7E-22  179.7   9.9  141  140-301    96-264 (397)
256 3tm0_A Aminoglycoside 3'-phosp  99.3 4.7E-12 1.6E-16  130.0  13.6  138  140-300    15-212 (263)
257 1nd4_A Aminoglycoside 3'-phosp  99.2 4.7E-11 1.6E-15  121.6  10.9  134  139-300    20-213 (264)
258 3dxp_A Putative acyl-COA dehyd  99.0 5.2E-10 1.8E-14  120.4  11.3  141  143-301    42-248 (359)
259 3sg8_A APH(2'')-ID; antibiotic  98.9 3.1E-10 1.1E-14  119.3   1.3  191  145-361    26-288 (304)
260 3r70_A Aminoglycoside phosphot  98.4 3.4E-07 1.2E-11   96.8   8.8  132  141-301    39-237 (320)
261 3tdw_A Gentamicin resistance p  98.3 1.9E-06 6.5E-11   90.5  11.1  137  144-301    24-224 (306)
262 3ovc_A Hygromycin-B 4-O-kinase  98.3 2.2E-06 7.5E-11   92.4  10.2   74  141-231    43-118 (362)
263 2olc_A MTR kinase, methylthior  98.2 2.1E-06 7.2E-11   93.4   9.7   76  144-231    35-119 (397)
264 4gkh_A Aminoglycoside 3'-phosp  98.2   5E-06 1.7E-10   85.0  11.8  132  146-300    31-222 (272)
265 3d1u_A Putative fructosamine-3  98.2 8.5E-06 2.9E-10   84.9  13.0   77  141-232    17-96  (288)
266 3ats_A Putative uncharacterize  98.1   3E-06   1E-10   90.6   8.2   88  142-233    23-120 (357)
267 2q83_A YTAA protein; 2635576,   97.9   2E-05 6.7E-10   83.2   8.0   72  144-231    37-115 (346)
268 3f7w_A Putative fructosamine-3  97.6 0.00081 2.8E-08   69.4  14.6   75  140-229    16-92  (288)
269 3csv_A Aminoglycoside phosphot  97.6 0.00035 1.2E-08   73.7  11.7  122  174-301    43-217 (333)
270 2pyw_A Uncharacterized protein  97.5 0.00011 3.6E-09   80.6   7.4   74  144-231    39-122 (420)
271 3dxq_A Choline/ethanolamine ki  97.4 0.00053 1.8E-08   71.3  11.2   69  144-231    23-92  (301)
272 3jr1_A Putative fructosamine-3  97.2 0.00072 2.5E-08   71.0   9.1   75  143-232    40-117 (312)
273 2ppq_A HSK, HK, homoserine kin  97.2  0.0017 5.9E-08   67.8  11.2  140  142-300    25-216 (322)
274 3c5i_A Choline kinase; choline  97.0  0.0012 4.2E-08   70.6   8.2   81  144-231    38-118 (369)
275 2yle_A Protein spire homolog 1  96.9   0.012 4.2E-07   57.8  13.8  123  231-402    33-156 (229)
276 1nw1_A Choline kinase (49.2 KD  96.7  0.0015 5.2E-08   71.7   6.5   80  143-231    77-156 (429)
277 2qg7_A Ethanolamine kinase PV0  96.6  0.0069 2.4E-07   67.0  10.9   73  143-230   112-184 (458)
278 1zyl_A Hypothetical protein YI  96.5  0.0042 1.4E-07   65.0   8.1   74  145-231    32-111 (328)
279 3feg_A Choline/ethanolamine ki  96.5  0.0017 5.9E-08   70.0   4.7  147  145-300    56-253 (379)
280 3mes_A Choline kinase; malaria  95.6   0.023 7.8E-07   62.1   8.5   81  143-231    74-154 (424)
281 3f2s_A CK, chetk-alpha, cholin  95.5   0.033 1.1E-06   60.3   9.2  149  145-300    58-279 (401)
282 3i1a_A Spectinomycin phosphotr  95.4   0.044 1.5E-06   57.8   9.6   31  266-301   206-236 (339)
283 3g15_A CK, chetk-alpha, cholin  93.0    0.29 9.8E-06   52.8   9.7   33  268-300   246-279 (401)
284 4aoj_A High affinity nerve gro  86.2    0.67 2.3E-05   48.5   5.2   28  395-422   292-319 (329)
285 4ase_A Vascular endothelial gr  84.7    0.66 2.3E-05   49.1   4.4    8  432-439   318-325 (353)
286 4gt4_A Tyrosine-protein kinase  83.3    0.91 3.1E-05   47.0   4.6    8  432-439   277-284 (308)
287 3mdy_A Bone morphogenetic prot  81.2    0.68 2.3E-05   47.7   2.7   38  387-424   296-333 (337)
288 3lb7_A RAF proto-oncogene seri  80.7    0.94 3.2E-05   46.4   3.6   33  394-426   272-304 (307)
289 3omv_A RAF proto-oncogene seri  80.7    0.93 3.2E-05   47.0   3.5   32  394-425   272-303 (307)
290 4asz_A BDNF/NT-3 growth factor  80.5     1.2 4.3E-05   45.8   4.4   44  393-436   237-282 (299)
291 3lxl_A Tyrosine-protein kinase  80.0     1.4 4.9E-05   45.3   4.7   41  384-424   265-305 (327)
292 3q4u_A Activin receptor type-1  78.9    0.89 3.1E-05   45.9   2.7   35  386-420   266-300 (301)
293 2buj_A Serine/threonine-protei  78.8    0.88   3E-05   46.5   2.6   35  394-428   278-312 (317)
294 1t46_A HOMO sapiens V-KIT hard  77.4       1 3.5E-05   45.7   2.6   30  394-423   279-308 (313)
295 3kmu_A ILK, integrin-linked ki  77.2     1.1 3.7E-05   44.4   2.6   29  394-422   242-270 (271)
296 4f0f_A Serine/threonine-protei  77.1     1.1 3.7E-05   45.1   2.6   27  394-420   261-287 (287)
297 3tt0_A Basic fibroblast growth  76.6       2 6.8E-05   45.5   4.7   12  409-420   298-309 (382)
298 1mp8_A Focal adhesion kinase 1  76.5     1.1 3.9E-05   44.9   2.6   29  394-422   248-276 (281)
299 1rjb_A FL cytokine receptor; k  76.4     1.1 3.8E-05   46.3   2.6   35  394-428   306-340 (344)
300 3ugc_A Tyrosine-protein kinase  76.1     1.2 3.9E-05   45.1   2.5   38  385-422   254-291 (295)
301 4e5w_A Tyrosine-protein kinase  75.7     1.2 4.2E-05   44.9   2.6   39  384-422   264-302 (302)
302 1u46_A ACK-1, activated CDC42   75.5     1.2 4.3E-05   44.6   2.6   34  394-427   256-289 (291)
303 3uzp_A CKI-delta, CKID, casein  75.4     1.7 5.9E-05   43.6   3.6   30  394-423   252-281 (296)
304 4hgt_A Casein kinase I isoform  75.4     1.7 5.9E-05   43.6   3.6   30  394-423   252-281 (296)
305 3brb_A Proto-oncogene tyrosine  75.1     1.3 4.5E-05   45.1   2.6   32  394-425   280-311 (313)
306 2wqm_A Serine/threonine-protei  73.8     1.5   5E-05   44.7   2.6   30  394-423   269-298 (310)
307 3og7_A AKAP9-BRAF fusion prote  73.8     1.5   5E-05   44.3   2.6   28  395-422   261-288 (289)
308 3kfa_A Tyrosine-protein kinase  73.7     1.5 5.1E-05   44.0   2.6   30  394-423   243-272 (288)
309 2i1m_A Macrophage colony-stimu  73.7     1.5   5E-05   45.2   2.6   29  394-422   298-326 (333)
310 1xbb_A Tyrosine-protein kinase  73.6       2 6.7E-05   43.3   3.5   29  394-422   251-279 (291)
311 3lxp_A Non-receptor tyrosine-p  73.3       3  0.0001   42.6   4.9   40  384-423   272-311 (318)
312 1byg_A CSK, protein (C-termina  73.0     1.6 5.4E-05   43.6   2.6   29  394-422   245-273 (278)
313 2eva_A TAK1 kinase - TAB1 chim  72.7     1.6 5.5E-05   44.6   2.6   32  394-425   235-266 (307)
314 3pls_A Macrophage-stimulating   72.6     1.6 5.5E-05   43.9   2.6   30  394-423   259-288 (298)
315 2pvf_A Fibroblast growth facto  71.4     1.8 6.1E-05   44.7   2.6   31  394-424   290-320 (334)
316 3f66_A Hepatocyte growth facto  71.3     1.8 6.2E-05   43.6   2.6   31  394-424   263-293 (298)
317 3p86_A Serine/threonine-protei  71.1     1.8 6.2E-05   44.3   2.6   30  394-423   270-299 (309)
318 2v62_A Serine/threonine-protei  71.0     2.5 8.6E-05   43.9   3.7   39  387-425   293-331 (345)
319 2w1i_A JAK2; chromosomal rearr  70.6     1.8 6.3E-05   44.4   2.5   37  385-421   285-321 (326)
320 2jii_A Serine/threonine-protei  70.6     2.6 8.8E-05   43.9   3.7   37  387-423   301-337 (352)
321 1csn_A Casein kinase-1; phosph  70.5     2.2 7.4E-05   42.9   3.0   29  395-423   256-284 (298)
322 1mqb_A Ephrin type-A receptor   70.0     2.6 8.9E-05   43.5   3.5   30  394-423   281-310 (333)
323 2psq_A Fibroblast growth facto  69.0     2.1 7.2E-05   45.2   2.6   30  394-423   336-365 (370)
324 3kul_A Ephrin type-A receptor   69.0     2.2 7.4E-05   44.1   2.6   29  411-439   281-309 (325)
325 1qpc_A LCK kinase; alpha beta   68.9     2.2 7.5E-05   42.5   2.6   30  394-423   241-270 (279)
326 3lzb_A Epidermal growth factor  68.9     2.2 7.4E-05   44.1   2.6   30  394-423   250-279 (327)
327 2y4i_B KSR2, HKSR2, kinase sup  68.6     2.3 7.8E-05   43.3   2.7   31  394-424   274-304 (319)
328 3s95_A LIMK-1, LIM domain kina  66.9       2 6.7E-05   43.7   1.8   28  411-438   250-277 (310)
329 3cbl_A C-FES, proto-oncogene t  66.1     2.6   9E-05   44.5   2.6   26  395-420   347-372 (377)
330 3c1x_A Hepatocyte growth facto  64.8     2.9 9.8E-05   44.2   2.6   32  395-426   328-359 (373)
331 3op5_A Serine/threonine-protei  61.4     7.9 0.00027   40.3   5.2   38  386-423   293-330 (364)
332 2qol_A Ephrin receptor; recept  60.8     3.8 0.00013   43.2   2.6   30  394-423   281-310 (373)
333 4eqm_A Protein kinase; transfe  58.4     6.7 0.00023   39.5   3.9   32  394-425   246-278 (294)
334 1opk_A P150, C-ABL, proto-onco  56.8     4.7 0.00016   44.4   2.6   28  411-438   446-473 (495)
335 1qcf_A Haematopoetic cell kina  56.7     4.8 0.00016   43.7   2.6   10  411-420   392-401 (454)
336 1fmk_A C-SRC, P60-SRC, tyrosin  56.6     4.8 0.00016   43.7   2.6   28  411-438   408-435 (452)
337 1k9a_A Carboxyl-terminal SRC k  56.3     4.9 0.00017   43.6   2.6    9  431-439   415-423 (450)
338 3uqc_A Probable conserved tran  54.5     7.4 0.00025   39.2   3.4   31  394-425   238-268 (286)
339 3hmm_A TGF-beta receptor type-  54.2     5.8  0.0002   40.6   2.6   35  388-422   263-297 (303)
340 2h34_A Serine/threonine-protei  53.8     5.4 0.00018   40.5   2.3   34  395-428   268-302 (309)
341 4fl3_A Tyrosine-protein kinase  53.6      13 0.00043   42.4   5.6   10  411-420   579-588 (635)
342 2j0j_A Focal adhesion kinase 1  53.1     9.4 0.00032   43.7   4.4    9  431-439   621-629 (656)
343 2h8h_A Proto-oncogene tyrosine  52.3     6.1 0.00021   43.9   2.6   28  411-438   491-518 (535)
344 4ano_A ESSB; membrane protein,  49.8      83  0.0028   30.5   9.9  106  216-362    57-164 (219)
345 4ann_A ESSB; membrane protein,  47.8      49  0.0017   32.1   7.9  124  195-362    35-159 (215)
346 2izr_A Casein kinase I isoform  47.6       9 0.00031   39.2   2.8   26  412-437   250-275 (330)
347 3sv0_A Casein kinase I-like; t  46.9      11 0.00039   41.2   3.7   27  411-437   246-272 (483)
348 2ozo_A Tyrosine-protein kinase  46.6      19 0.00066   40.7   5.6    9  431-439   568-576 (613)
349 4g3f_A NF-kappa-beta-inducing   42.9     5.5 0.00019   41.7   0.3   41  394-442   288-328 (336)
350 2qkw_B Protein kinase; three-h  42.3      10 0.00036   38.4   2.3   38  386-423   279-316 (321)
351 3g2f_A Bone morphogenetic prot  40.7      13 0.00044   37.8   2.7   36  388-423   284-319 (336)
352 2a19_B Interferon-induced, dou  40.0      22 0.00075   34.9   4.3   30  394-423   246-275 (284)
353 2nru_A Interleukin-1 receptor-  38.1      18 0.00063   36.1   3.3   35  387-421   271-305 (307)
354 3gxj_A TGF-beta receptor type-  37.4      11 0.00039   37.5   1.6   37  387-423   262-298 (303)
355 3soc_A Activin receptor type-2  34.7      19 0.00065   36.6   2.8   35  388-422   284-318 (322)
356 4fvq_A Tyrosine-protein kinase  31.8      20 0.00067   35.5   2.3   34  392-425   245-278 (289)
357 1b6c_B TGF-B superfamily recep  31.1      19 0.00064   36.6   2.1   37  387-423   301-337 (342)
358 3sxs_A Cytoplasmic tyrosine-pr  30.5      26 0.00088   34.2   2.9   33  392-424   234-266 (268)
359 2ivs_A Proto-oncogene tyrosine  30.4      28 0.00094   34.8   3.2   30  394-423   283-312 (314)
360 1u59_A Tyrosine-protein kinase  29.7      26 0.00091   34.6   2.8   29  394-422   244-272 (287)
361 4eut_A Serine/threonine-protei  29.5      27 0.00092   36.7   3.0   42  382-423   269-310 (396)
362 3dtc_A Mitogen-activated prote  29.2      27 0.00094   34.0   2.8   27  394-420   245-271 (271)
363 3cc6_A Protein tyrosine kinase  28.1      32  0.0011   33.8   3.2   30  394-423   245-274 (281)
364 3t9t_A Tyrosine-protein kinase  27.5      34  0.0012   33.1   3.2   31  392-422   234-264 (267)
365 3uim_A Brassinosteroid insensi  27.4      32  0.0011   34.7   3.0   34  387-420   276-309 (326)
366 4hcu_A Tyrosine-protein kinase  26.9      35  0.0012   33.2   3.2   31  392-422   236-266 (269)
367 3qup_A Tyrosine-protein kinase  26.8      32  0.0011   34.7   2.8   30  394-423   270-299 (323)
368 2xir_A Vascular endothelial gr  26.4      36  0.0012   34.0   3.2   30  394-423   282-311 (316)
369 3vhe_A Vascular endothelial gr  26.3      23 0.00079   36.3   1.7   30  394-423   327-356 (359)
370 3cxl_A N-chimerin; SH2, RHO-GA  25.8     5.4 0.00019   43.7  -3.4   59  142-213   145-211 (463)
371 3eqc_A Dual specificity mitoge  25.2      68  0.0023   32.7   5.2   31  385-415   294-324 (360)
372 3gen_A Tyrosine-protein kinase  24.8      37  0.0013   33.3   2.8   29  394-422   252-280 (283)
373 1p4o_A Insulin-like growth fac  24.8      43  0.0015   33.5   3.5   30  394-423   271-300 (322)
374 1fvr_A Tyrosine-protein kinase  24.1      41  0.0014   33.9   3.2   30  394-423   272-301 (327)
375 3poz_A Epidermal growth factor  22.7      48  0.0017   33.5   3.3   29  394-422   250-278 (327)

No 1  
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00  E-value=1.6e-55  Score=473.24  Aligned_cols=256  Identities=18%  Similarity=0.188  Sum_probs=214.2

Q ss_pred             CeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCCCCCCChHHHHHHHHcCCCCCccEEEEEeeeC
Q 005221          140 MYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNTLGGSHGVPRVHFKGRQG  219 (708)
Q Consensus       140 ~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~~~~~~~~Ei~il~~L~h~~~v~~~~~~~~~~  219 (708)
                      .|+++++||+|+||+||+|++..          +++.||||++..........+.+|+.+|+.|+|+|+|..+. ++.++
T Consensus        75 ~y~~~~~iG~G~fG~V~~a~~~~----------tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~-~~~~~  143 (346)
T 4fih_A           75 YLDNFIKIGEGSTGIVCIATVRS----------SGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYN-SYLVG  143 (346)
T ss_dssp             TEEEEEEEEECSSCEEEEEEETT----------TCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEE-EEEET
T ss_pred             hcEEeEEeecCcCeEEEEEEECC----------CCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEE-EEEEC
Confidence            59999999999999999999988          89999999998765555667889999999999998666554 55778


Q ss_pred             CEEEEEEecC-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcEEEeccCc
Q 005221          220 DYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGL  298 (708)
Q Consensus       220 ~~~~lvme~~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~vkL~DFGl  298 (708)
                      +.+||||||| ||+|.+++.+.  .|++..++.|+.||+.||+|||++|||||||||+||||+.++     .+||+|||+
T Consensus       144 ~~~~ivmEy~~gg~L~~~l~~~--~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g-----~vKl~DFGl  216 (346)
T 4fih_A          144 DELWVVMEFLEGGALTDIVTHT--RMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDG-----RVKLSDFGF  216 (346)
T ss_dssp             TEEEEEECCCTTEEHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTC-----CEEECCCTT
T ss_pred             CEEEEEEeCCCCCcHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEECCCC-----CEEEecCcC
Confidence            8999999999 89999998763  599999999999999999999999999999999999999887     599999999


Q ss_pred             cccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhhccC
Q 005221          299 ATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCKKKMA  378 (708)
Q Consensus       299 a~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLltG~~Pf~~~~~~~~~~~i~~~~~~  378 (708)
                      |+.+......        ...++||+.|||||++.+..|+.++|||||||+||||++|++||.+.+..+....+.... .
T Consensus       217 a~~~~~~~~~--------~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~-~  287 (346)
T 4fih_A          217 CAQVSKEVPR--------RKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNL-P  287 (346)
T ss_dssp             CEECCSSSCC--------BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSS-C
T ss_pred             ceecCCCCCc--------ccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCC-C
Confidence            9987554321        235789999999999999999999999999999999999999998765444333333221 1


Q ss_pred             CCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhHHHHhcc
Q 005221          379 TSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKLIYQVGH  444 (708)
Q Consensus       379 ~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~~f~~~~  444 (708)
                      +.... ...+                     ..++++||.+||..||++|||+.|+|+||||+...
T Consensus       288 ~~~~~-~~~~---------------------s~~~~dli~~~L~~dP~~R~ta~e~l~Hp~~~~~~  331 (346)
T 4fih_A          288 PRLKN-LHKV---------------------SPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAG  331 (346)
T ss_dssp             CCCSC-GGGS---------------------CHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGCC
T ss_pred             CCCCc-cccC---------------------CHHHHHHHHHHcCCChhHCcCHHHHhcCHhhcCCC
Confidence            11100 0011                     25789999999999999999999999999997654


No 2  
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00  E-value=3.3e-56  Score=479.31  Aligned_cols=264  Identities=17%  Similarity=0.158  Sum_probs=213.1

Q ss_pred             ccccCCCCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCC--CCCCCChHHHHHHHHcCCCCCc
Q 005221          132 KIAVGGSPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSK--GCNYGPPYEWQVYNTLGGSHGV  209 (708)
Q Consensus       132 ~~~~~~~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~--~~~~~~~~Ei~il~~L~h~~~v  209 (708)
                      .+.+...++|+++++||+|+||+||+|++..          +++.||||++.+...  .....+.+|+++|++|+|+|+|
T Consensus        17 n~~f~sme~Y~~~~~lG~G~fg~V~~a~~~~----------~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV   86 (350)
T 4b9d_A           17 NLYFQSMEKYVRLQKIGEGSFGKAILVKSTE----------DGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIV   86 (350)
T ss_dssp             CCBCSCCCCEEEEEEC------CEEEEEETT----------TCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred             ccCCCcccceEEeEEEecCCCeEEEEEEECC----------CCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCC
Confidence            3444556799999999999999999999988          799999999986532  1234578899999999999866


Q ss_pred             cEEEEEeeeCCEEEEEEecC-CCCHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCC
Q 005221          210 PRVHFKGRQGDYYVMVMDML-GPSLWDVWNNN-SHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPD  287 (708)
Q Consensus       210 ~~~~~~~~~~~~~~lvme~~-ggsL~~~l~~~-~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~  287 (708)
                      ..+ .++.+++.+||||||| ||+|.+++... +..+++..++.|+.||+.||+|||++|||||||||+||||+.++   
T Consensus        87 ~~~-~~~~~~~~~yiVmEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g---  162 (350)
T 4b9d_A           87 QYR-ESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDG---  162 (350)
T ss_dssp             CEE-EEEEETTEEEEEEECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGEEECTTC---
T ss_pred             cEE-EEEEECCEEEEEEeCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCC---
Confidence            555 4557888999999999 89999999754 34689999999999999999999999999999999999999887   


Q ss_pred             CCcEEEeccCccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCC
Q 005221          288 EKKLFLVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGEN  367 (708)
Q Consensus       288 ~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLltG~~Pf~~~~~~~  367 (708)
                        .+||+|||+|+.+.....        ....++||+.|||||++.+..|+.++|||||||+||||++|++||.+.+..+
T Consensus       163 --~vKl~DFGla~~~~~~~~--------~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~  232 (350)
T 4b9d_A          163 --TVQLGDFGIARVLNSTVE--------LARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKN  232 (350)
T ss_dssp             --CEEECSTTEESCCCHHHH--------HHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHH
T ss_pred             --CEEEcccccceeecCCcc--------cccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH
Confidence              599999999987654211        1134789999999999999999999999999999999999999999876555


Q ss_pred             chhhhhhhccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhHHHHhcc
Q 005221          368 KGFLVCKKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKLIYQVGH  444 (708)
Q Consensus       368 ~~~~i~~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~~f~~~~  444 (708)
                      ....+......+.+.    .++                     .++.+||.+||..||++|||+.|+|+||||....
T Consensus       233 ~~~~i~~~~~~~~~~----~~s---------------------~~~~~li~~~L~~dP~~R~s~~e~l~hp~~~~~~  284 (350)
T 4b9d_A          233 LVLKIISGSFPPVSL----HYS---------------------YDLRSLVSQLFKRNPRDRPSVNSILEKGFIAKRI  284 (350)
T ss_dssp             HHHHHHHTCCCCCCT----TSC---------------------HHHHHHHHHHTCSSGGGSCCHHHHHTSHHHHTTG
T ss_pred             HHHHHHcCCCCCCCc----cCC---------------------HHHHHHHHHHccCChhHCcCHHHHhcCHHhhcCC
Confidence            555555444322221    122                     4788999999999999999999999999997543


No 3  
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00  E-value=3e-56  Score=472.12  Aligned_cols=257  Identities=19%  Similarity=0.223  Sum_probs=214.2

Q ss_pred             CCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecC---CCCCCCCChHHHHHHHHcCCCCCccEEEEE
Q 005221          139 PMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRS---SKGCNYGPPYEWQVYNTLGGSHGVPRVHFK  215 (708)
Q Consensus       139 ~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~---~~~~~~~~~~Ei~il~~L~h~~~v~~~~~~  215 (708)
                      ++|++++.||+|+||+||+|++..          +++.||||++.+.   .......+.+|+++|++|+|||+|..+ .+
T Consensus        32 ~dy~i~~~lG~G~fg~V~~a~~~~----------~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~-~~  100 (311)
T 4aw0_A           32 EDFKFGKILGEGSFSTVVLARELA----------TSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY-FT  100 (311)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETT----------TCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEE-EE
T ss_pred             cccEEEEEEecccCeEEEEEEECC----------CCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEE-EE
Confidence            469999999999999999999988          8999999999864   222234578999999999999866555 55


Q ss_pred             eeeCCEEEEEEecC-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcEEEe
Q 005221          216 GRQGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLV  294 (708)
Q Consensus       216 ~~~~~~~~lvme~~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~vkL~  294 (708)
                      +.+++.+||||||| ||+|.+++.+.+ .|++..++.|+.||+.||+|||++|||||||||+||||+.++     .+||+
T Consensus       101 ~~~~~~~yivmEy~~gG~L~~~i~~~~-~l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl~~~g-----~vKl~  174 (311)
T 4aw0_A          101 FQDDEKLYFGLSYAKNGELLKYIRKIG-SFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDM-----HIQIT  174 (311)
T ss_dssp             EECSSEEEEEECCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTS-----CEEEC
T ss_pred             EEeCCEEEEEEecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEEcCCC-----CEEEE
Confidence            57888999999999 899999998765 699999999999999999999999999999999999999887     59999


Q ss_pred             ccCccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhh
Q 005221          295 DLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCK  374 (708)
Q Consensus       295 DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLltG~~Pf~~~~~~~~~~~i~~  374 (708)
                      |||+|+.+......      ....++|||+.|||||++.+..|+.++|||||||+||+|++|++||.+.+..+....+..
T Consensus       175 DFGla~~~~~~~~~------~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~  248 (311)
T 4aw0_A          175 DFGTAKVLSPESKQ------ARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIK  248 (311)
T ss_dssp             CCTTCEECCTTTTC------CCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH
T ss_pred             EcCCceecCCCCCc------ccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHc
Confidence            99999987543321      123468899999999999999999999999999999999999999988655444444444


Q ss_pred             hccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchH------HHHhHHHHhcc
Q 005221          375 KKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTE------GAQKLIYQVGH  444 (708)
Q Consensus       375 ~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e------~l~h~~f~~~~  444 (708)
                      .....     +..+                     ..++++||.+||..||++|||+.|      +++||||+...
T Consensus       249 ~~~~~-----p~~~---------------------s~~~~dli~~lL~~dp~~R~t~~e~~~~~~i~~Hp~F~~id  298 (311)
T 4aw0_A          249 LEYDF-----PEKF---------------------FPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVT  298 (311)
T ss_dssp             TCCCC-----CTTC---------------------CHHHHHHHHHHSCSSGGGSTTSGGGTCHHHHHTSGGGTTCC
T ss_pred             CCCCC-----Cccc---------------------CHHHHHHHHHHccCCHhHCcChHHHcCCHHHHCCCCcCCCC
Confidence            33221     1111                     247899999999999999999988      58899987543


No 4  
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00  E-value=2.2e-55  Score=458.90  Aligned_cols=253  Identities=23%  Similarity=0.230  Sum_probs=197.6

Q ss_pred             CCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCC---CCCCCChHHHHHHHHcCCCCCccEEEEE
Q 005221          139 PMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSK---GCNYGPPYEWQVYNTLGGSHGVPRVHFK  215 (708)
Q Consensus       139 ~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~---~~~~~~~~Ei~il~~L~h~~~v~~~~~~  215 (708)
                      ++|++++.||+|+||+||+|++..          +++.||||++++...   .....+.+|+++|+.|+|||+|..+. +
T Consensus        13 g~Y~i~~~lG~G~fg~V~~~~~~~----------~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~-~   81 (275)
T 3hyh_A           13 GNYQIVKTLGEGSFGKVKLAYHTT----------TGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD-V   81 (275)
T ss_dssp             -CCEEEEEEEC---CCEEEEECTT----------TCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEE-E
T ss_pred             eCeEEEEEEecCcCeEEEEEEECC----------CCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEE-E
Confidence            379999999999999999999987          799999999986532   22234788999999999988665554 5


Q ss_pred             eeeCCEEEEEEecCCCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcEEEec
Q 005221          216 GRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVD  295 (708)
Q Consensus       216 ~~~~~~~~lvme~~ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~vkL~D  295 (708)
                      +.+.+.+|||||||+|+|.+++.+.+ .|++..++.++.||+.||+|||++|||||||||+||||+.++     .+||+|
T Consensus        82 ~~~~~~~~ivmEy~~g~L~~~l~~~~-~l~e~~~~~~~~qi~~al~ylH~~~IiHRDiKP~NILl~~~~-----~vkl~D  155 (275)
T 3hyh_A           82 IKSKDEIIMVIEYAGNELFDYIVQRD-KMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHL-----NVKIAD  155 (275)
T ss_dssp             EECSSEEEEEEECCCEEHHHHHHHSC-SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTC-----CEEECC
T ss_pred             EEECCEEEEEEeCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCcccccCChHHeEECCCC-----CEEEee
Confidence            57788999999999999999998765 699999999999999999999999999999999999999887     599999


Q ss_pred             cCccccccCCCCCccccccCCCceeeccccccchhhhcCCCC-CchhhHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhh
Q 005221          296 LGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTG-SRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCK  374 (708)
Q Consensus       296 FGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~-s~~~DIwSlGviL~eLltG~~Pf~~~~~~~~~~~i~~  374 (708)
                      ||+|+...+...         ..+.+||+.|||||++.+..| +.++|||||||+||+|++|++||.+.+.......+..
T Consensus       156 FGla~~~~~~~~---------~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~~~~i~~  226 (275)
T 3hyh_A          156 FGLSNIMTDGNF---------LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISN  226 (275)
T ss_dssp             SSCC------------------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH
T ss_pred             cCCCeecCCCCc---------cCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHc
Confidence            999987654321         235789999999999999886 5899999999999999999999987544333333333


Q ss_pred             hccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhHHHHhc
Q 005221          375 KKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKLIYQVG  443 (708)
Q Consensus       375 ~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~~f~~~  443 (708)
                      ....     ++..++                     .++.+||.+||..||++|||+.|+++||||+..
T Consensus       227 ~~~~-----~p~~~s---------------------~~~~~li~~~L~~dP~~R~s~~eil~hpw~k~~  269 (275)
T 3hyh_A          227 GVYT-----LPKFLS---------------------PGAAGLIKRMLIVNPLNRISIHEIMQDDWFKVD  269 (275)
T ss_dssp             TCCC-----CCTTSC---------------------HHHHHHHHHHSCSSGGGSCCHHHHHHCHHHHTT
T ss_pred             CCCC-----CCCCCC---------------------HHHHHHHHHHccCChhHCcCHHHHHcCcccccC
Confidence            2211     111121                     478899999999999999999999999999754


No 5  
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00  E-value=7.5e-55  Score=479.25  Aligned_cols=257  Identities=18%  Similarity=0.180  Sum_probs=215.1

Q ss_pred             CCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCCCCCCChHHHHHHHHcCCCCCccEEEEEeee
Q 005221          139 PMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNTLGGSHGVPRVHFKGRQ  218 (708)
Q Consensus       139 ~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~~~~~~~~Ei~il~~L~h~~~v~~~~~~~~~  218 (708)
                      ..|+++++||+|+||.||+|++..          +++.||||++..........+.+|+.+|+.|+|+|+|..+.. +..
T Consensus       151 ~~y~~~~~iG~G~fG~V~~a~~~~----------tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~-~~~  219 (423)
T 4fie_A          151 SYLDNFIKIGEGSTGIVCIATVRS----------SGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNS-YLV  219 (423)
T ss_dssp             GTEEEEEEEEECSSCEEEEEEETT----------TCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEE-EEE
T ss_pred             HhcEeeeEeccCcCcEEEEEEECC----------CCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEE-EEE
Confidence            469999999999999999999988          899999999987765556678899999999999986665554 577


Q ss_pred             CCEEEEEEecC-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcEEEeccC
Q 005221          219 GDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLG  297 (708)
Q Consensus       219 ~~~~~lvme~~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~vkL~DFG  297 (708)
                      ++.+||||||| ||+|.+++...  .|++..++.|+.||+.||+|||++|||||||||+||||+.+|     .+||+|||
T Consensus       220 ~~~~~iVmEy~~gG~L~~~i~~~--~l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl~~~g-----~vKl~DFG  292 (423)
T 4fie_A          220 GDELWVVMEFLEGGALTDIVTHT--RMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDG-----RVKLSDFG  292 (423)
T ss_dssp             TTEEEEEEECCTTEEHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEECTTC-----CEEECCCT
T ss_pred             CCEEEEEEeCCCCCcHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCC-----CEEEecCc
Confidence            88999999999 89999998764  599999999999999999999999999999999999999888     59999999


Q ss_pred             ccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhhcc
Q 005221          298 LATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCKKKM  377 (708)
Q Consensus       298 la~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLltG~~Pf~~~~~~~~~~~i~~~~~  377 (708)
                      +|+.+......        ...+|||+.|||||++.+..|+.++|||||||+||||++|++||.+.+..+....+.....
T Consensus       293 la~~~~~~~~~--------~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~  364 (423)
T 4fie_A          293 FCAQVSKEVPR--------RKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLP  364 (423)
T ss_dssp             TCEECCSSCCC--------BCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCC
T ss_pred             cceECCCCCcc--------ccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCC
Confidence            99977554321        2357899999999999999999999999999999999999999987655444333332211


Q ss_pred             CCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhHHHHhcc
Q 005221          378 ATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKLIYQVGH  444 (708)
Q Consensus       378 ~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~~f~~~~  444 (708)
                       +.... ...+                     ...+++||.+||..||++|||+.|+|+||||+...
T Consensus       365 -~~~~~-~~~~---------------------s~~~~dli~~~L~~dP~~R~ta~ell~Hp~~~~~~  408 (423)
T 4fie_A          365 -PRLKN-LHKV---------------------SPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAG  408 (423)
T ss_dssp             -CCCSC-TTSS---------------------CHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGCC
T ss_pred             -CCCcc-cccC---------------------CHHHHHHHHHHcCCChhHCcCHHHHhcCHHhcCCC
Confidence             10000 0111                     24789999999999999999999999999997654


No 6  
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00  E-value=1.3e-54  Score=459.24  Aligned_cols=257  Identities=23%  Similarity=0.319  Sum_probs=205.6

Q ss_pred             CCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCC--CCCCCCChHHHHHHHHcCCCCCccEEEEEe
Q 005221          139 PMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSS--KGCNYGPPYEWQVYNTLGGSHGVPRVHFKG  216 (708)
Q Consensus       139 ~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~--~~~~~~~~~Ei~il~~L~h~~~v~~~~~~~  216 (708)
                      ++|++++.||+|+||+||+|++...       ..+++.||||++++..  ......+.+|+++|++|+|||+|..+ .++
T Consensus        24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~-------~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~-~~~   95 (304)
T 3ubd_A           24 SQFELLKVLGQGSFGKVFLVKKISG-------SDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLH-YAF   95 (304)
T ss_dssp             GGEEEEEEEECGGGCEEEEEEECSS-------TTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEE-EEE
T ss_pred             cccEEEEEEecCCCeEEEEEEEccC-------CCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEE-EEE
Confidence            4699999999999999999998541       2267899999987642  22344678899999999999866554 555


Q ss_pred             eeCCEEEEEEecC-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcEEEec
Q 005221          217 RQGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVD  295 (708)
Q Consensus       217 ~~~~~~~lvme~~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~vkL~D  295 (708)
                      .+++.+||||||| ||+|.+++.+.+ .|++..++.|+.||+.||+|||++|||||||||+|||++.++     .+||+|
T Consensus        96 ~~~~~~~ivmEy~~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g-----~vKl~D  169 (304)
T 3ubd_A           96 QTEGKLYLILDFLRGGDLFTRLSKEV-MFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEG-----HIKLTD  169 (304)
T ss_dssp             EETTEEEEEECCCTTCEEHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTS-----CEEEES
T ss_pred             EECCEEEEEEEcCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHeEEcCCC-----CEEecc
Confidence            7888999999999 999999998765 699999999999999999999999999999999999999887     599999


Q ss_pred             cCccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhh
Q 005221          296 LGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCKK  375 (708)
Q Consensus       296 FGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLltG~~Pf~~~~~~~~~~~i~~~  375 (708)
                      ||+|+...+...        ...+++||+.|||||++.+..|+.++|||||||+||||++|++||.+.+..+....+.+.
T Consensus       170 FGla~~~~~~~~--------~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~  241 (304)
T 3ubd_A          170 FGLSKESIDHEK--------KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKA  241 (304)
T ss_dssp             SEEEEC-----C--------CCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC
T ss_pred             cccceeccCCCc--------cccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHHHHHHHHcC
Confidence            999986544322        223578999999999999999999999999999999999999999986655544444443


Q ss_pred             ccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcc-----hHHHHhHHHHhc
Q 005221          376 KMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPIS-----TEGAQKLIYQVG  443 (708)
Q Consensus       376 ~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~-----~e~l~h~~f~~~  443 (708)
                      ....     +..++                     .++.+||.+||..||++|||+     +|+++||||+..
T Consensus       242 ~~~~-----p~~~s---------------------~~~~~li~~~L~~dP~~R~ta~~~~~~eil~Hp~f~~i  288 (304)
T 3ubd_A          242 KLGM-----PQFLS---------------------PEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTI  288 (304)
T ss_dssp             CCCC-----CTTSC---------------------HHHHHHHHHHTCSSGGGSTTCSTTTHHHHHTSGGGTTC
T ss_pred             CCCC-----CCcCC---------------------HHHHHHHHHHcccCHHHCCCCCcCCHHHHHcCccccCC
Confidence            3211     11122                     478899999999999999995     699999999753


No 7  
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00  E-value=2.2e-53  Score=447.36  Aligned_cols=254  Identities=17%  Similarity=0.207  Sum_probs=204.1

Q ss_pred             CCe-EEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCC--CCCCCChHHHHHHHHcCCCCCccEEEEE
Q 005221          139 PMY-RLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSK--GCNYGPPYEWQVYNTLGGSHGVPRVHFK  215 (708)
Q Consensus       139 ~~Y-~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~--~~~~~~~~Ei~il~~L~h~~~v~~~~~~  215 (708)
                      ++| ++.++||+|+||+||+|++..          +++.||+|++.....  .....+.+|+.+|++|+|||+|..+..+
T Consensus        25 gr~~~~~~~iG~G~fg~Vy~a~~~~----------~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~   94 (290)
T 3fpq_A           25 GRFLKFDIEIGRGSFKTVYKGLDTE----------TTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSW   94 (290)
T ss_dssp             SSEEEEEEEEEECSSEEEEEEEETT----------TCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred             CceEEeeeEEecCcCcEEEEEEECC----------CCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEE
Confidence            355 888999999999999999987          789999999876422  2233578899999999999988877766


Q ss_pred             ee---eCCEEEEEEecC-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC--ceecCCCCCcEEeCC-CCCCCC
Q 005221          216 GR---QGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKG--YVHGDVKPENFLLGP-PGTPDE  288 (708)
Q Consensus       216 ~~---~~~~~~lvme~~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~g--IvHrDIKP~NILl~~-~g~~~~  288 (708)
                      ..   ..+.+||||||| ||+|.+++.+.+ .+++..++.|+.||+.||+|||++|  ||||||||+||||+. ++    
T Consensus        95 ~~~~~~~~~~~lvmEy~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~~~~g----  169 (290)
T 3fpq_A           95 ESTVKGKKCIVLVTELMTSGTLKTYLKRFK-VMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTG----  169 (290)
T ss_dssp             EEEETTEEEEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEESSTTS----
T ss_pred             eeccCCCcEEEEEEeCCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhheeEECCCC----
Confidence            43   246799999999 899999998765 6999999999999999999999999  999999999999974 45    


Q ss_pred             CcEEEeccCccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCc
Q 005221          289 KKLFLVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENK  368 (708)
Q Consensus       289 ~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLltG~~Pf~~~~~~~~  368 (708)
                       .+||+|||+|+......          ..+++||+.|||||++.+ .|+.++|||||||+||||+||++||.+......
T Consensus       170 -~vKl~DFGla~~~~~~~----------~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~  237 (290)
T 3fpq_A          170 -SVKIGDLGLATLKRASF----------AKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQ  237 (290)
T ss_dssp             -CEEECCTTGGGGCCTTS----------BEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHH
T ss_pred             -CEEEEeCcCCEeCCCCc----------cCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHH
Confidence             59999999998643321          235789999999999876 599999999999999999999999986543322


Q ss_pred             hhhhhhhccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhHHHHh
Q 005221          369 GFLVCKKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKLIYQV  442 (708)
Q Consensus       369 ~~~i~~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~~f~~  442 (708)
                      ......  ....|..+...+                     .+++.+||.+||..||++|||+.|+|+||||+.
T Consensus       238 ~~~~i~--~~~~~~~~~~~~---------------------~~~~~~li~~~L~~dP~~R~s~~e~l~Hp~~~~  288 (290)
T 3fpq_A          238 IYRRVT--SGVKPASFDKVA---------------------IPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQE  288 (290)
T ss_dssp             HHHHHT--TTCCCGGGGGCC---------------------CHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC-
T ss_pred             HHHHHH--cCCCCCCCCccC---------------------CHHHHHHHHHHccCChhHCcCHHHHhcCccccC
Confidence            221111  111122111112                     246889999999999999999999999999864


No 8  
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00  E-value=7.5e-54  Score=470.89  Aligned_cols=287  Identities=17%  Similarity=0.181  Sum_probs=222.6

Q ss_pred             CCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCC--CCCCChHHHHHHHHcCCCCCccEEEEE
Q 005221          138 SPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKG--CNYGPPYEWQVYNTLGGSHGVPRVHFK  215 (708)
Q Consensus       138 ~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~--~~~~~~~Ei~il~~L~h~~~v~~~~~~  215 (708)
                      .++|++++.||+|+||+||+|++..          +++.||||++.+....  ....+.+|+++|+.|+|+|+|..++.+
T Consensus        53 ~~~Y~~~~~lG~G~fG~V~~a~~~~----------t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~  122 (398)
T 4b99_A           53 GDEYEIIETIGNGAYGVVSSARRRL----------TGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDIL  122 (398)
T ss_dssp             CSSEEEEEEEEECSSCEEEEEEETT----------TCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEC
T ss_pred             CCCeEEEEEEecccCeEEEEEEECC----------CCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeee
Confidence            3589999999999999999999988          8999999999764322  123466899999999999977777654


Q ss_pred             e-----eeCCEEEEEEecCCCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCc
Q 005221          216 G-----RQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKK  290 (708)
Q Consensus       216 ~-----~~~~~~~lvme~~ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~  290 (708)
                      .     .+.+.+|||||||+|+|.+++...+ .|++..++.|+.||+.||+|||++|||||||||+|||++.++     .
T Consensus       123 ~~~~~~~~~~~~~ivmE~~~g~L~~~i~~~~-~l~~~~~~~~~~qil~al~ylH~~~iiHRDlKP~NIl~~~~~-----~  196 (398)
T 4b99_A          123 RPTVPYGEFKSVYVVLDLMESDLHQIIHSSQ-PLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENC-----E  196 (398)
T ss_dssp             CCSSCTTTCCCEEEEEECCSEEHHHHHTSSS-CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTC-----C
T ss_pred             ecccccccCCEEEEEEeCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCcCcCCCcCccccccCCCC-----C
Confidence            3     2346799999999999999998765 799999999999999999999999999999999999999887     5


Q ss_pred             EEEeccCccccccCCCCCccccccCCCceeeccccccchhhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCch
Q 005221          291 LFLVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGR-TGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKG  369 (708)
Q Consensus       291 vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~-~~s~~~DIwSlGviL~eLltG~~Pf~~~~~~~~~  369 (708)
                      +||+|||+|+.+.......    ......++||+.|||||++.+. .|+.++||||||||||||++|++||.+.+..+..
T Consensus       197 ~Ki~DFGla~~~~~~~~~~----~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l  272 (398)
T 4b99_A          197 LKIGDFGMARGLCTSPAEH----QYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQL  272 (398)
T ss_dssp             EEECCCTTCBCC-----------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHH
T ss_pred             EEEeecceeeecccCcccc----ccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHH
Confidence            9999999998765432211    1223467899999999999886 5699999999999999999999999998877777


Q ss_pred             hhhhhhccCCCCCCccCCCChHHHHHHHHHHcCCCCC----ccc-HHHHHHHHHhhhCCCCCCCCcchHHHHhHHHHhcc
Q 005221          370 FLVCKKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDE----EPN-YAKYISLFDGIVGPNPDIRPISTEGAQKLIYQVGH  444 (708)
Q Consensus       370 ~~i~~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~----rP~-~~~l~~LL~~mL~~dP~~Rps~~e~l~h~~f~~~~  444 (708)
                      ..+......+....+.......+..++.......+..    -|+ ..++++||.+||..||++|||+.|+|+||||+...
T Consensus       273 ~~I~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~  352 (398)
T 4b99_A          273 QLIMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFLAKYH  352 (398)
T ss_dssp             HHHHHHHCCCCGGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTSGGGTTTC
T ss_pred             HHHHHhcCCCChHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcCHhhCcCC
Confidence            7777766655544433322222222222111111100    011 25789999999999999999999999999997654


No 9  
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00  E-value=7.7e-53  Score=450.99  Aligned_cols=255  Identities=20%  Similarity=0.249  Sum_probs=207.5

Q ss_pred             CCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCCCCCCChHHHHHHHHcCCCCCccEEEEEeee
Q 005221          139 PMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNTLGGSHGVPRVHFKGRQ  218 (708)
Q Consensus       139 ~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~~~~~~~~Ei~il~~L~h~~~v~~~~~~~~~  218 (708)
                      +.|++.++||+|+||.||+|++..          +++.||||+++...     ...+|+.+|+.|+|||+|..+. ++.+
T Consensus        58 ~~~~~~~~lG~G~fG~Vy~a~~~~----------~g~~vAiK~i~~~~-----~~~~E~~il~~l~HpnIV~l~~-~~~~  121 (336)
T 4g3f_A           58 HWMTHQPRVGRGSFGEVHRMKDKQ----------TGFQCAVKKVRLEV-----FRVEELVACAGLSSPRIVPLYG-AVRE  121 (336)
T ss_dssp             TEEEEEEEEEEETTEEEEEEEETT----------TCCEEEEEEEETTT-----CCTHHHHTTTTCCCTTBCCEEE-EEEE
T ss_pred             hheEeCcEeccCCCeEEEEEEECC----------CCCEEEEEEECHHH-----hHHHHHHHHHhCCCCCCCcEEE-EEEE
Confidence            469999999999999999999988          89999999997642     2457999999999998666555 5578


Q ss_pred             CCEEEEEEecC-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcEEEeccC
Q 005221          219 GDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLG  297 (708)
Q Consensus       219 ~~~~~lvme~~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~vkL~DFG  297 (708)
                      ++.+||||||| ||+|.+++.+.+ .|++..++.|+.||+.||+|||++|||||||||+||||+.+|+    .+||+|||
T Consensus       122 ~~~~~ivmEy~~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~----~vKl~DFG  196 (336)
T 4g3f_A          122 GPWVNIFMELLEGGSLGQLIKQMG-CLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGS----RAALCDFG  196 (336)
T ss_dssp             TTEEEEEECCCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEECTTSC----CEEECCCT
T ss_pred             CCEEEEEEeccCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEeCCCC----EEEEeeCC
Confidence            88999999999 899999998765 6999999999999999999999999999999999999988763    59999999


Q ss_pred             ccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhhcc
Q 005221          298 LATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCKKKM  377 (708)
Q Consensus       298 la~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLltG~~Pf~~~~~~~~~~~i~~~~~  377 (708)
                      +|+.+.........   .....++||+.|||||++.+..|+.++|||||||+||||++|++||.+.+.......+.....
T Consensus       197 la~~~~~~~~~~~~---~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~  273 (336)
T 4g3f_A          197 HALCLQPDGLGKSL---LTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASEPP  273 (336)
T ss_dssp             TCEEC---------------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHHHHSCC
T ss_pred             CCeEccCCCcccce---ecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHcCCC
Confidence            99987654322111   123457899999999999999999999999999999999999999998776666555544321


Q ss_pred             CCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhHHH
Q 005221          378 ATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKLIY  440 (708)
Q Consensus       378 ~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~~f  440 (708)
                      .  ...++..++                     ..+.+||.+||..||.+|||+.|+++|+..
T Consensus       274 ~--~~~~~~~~s---------------------~~~~~li~~~L~~dP~~R~sa~el~~~l~~  313 (336)
T 4g3f_A          274 P--IREIPPSCA---------------------PLTAQAIQEGLRKEPVHRASAMELRRKVGK  313 (336)
T ss_dssp             G--GGGSCTTSC---------------------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             C--chhcCccCC---------------------HHHHHHHHHHccCCHhHCcCHHHHHHHHHH
Confidence            1  111222232                     467889999999999999999999888653


No 10 
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00  E-value=2.5e-51  Score=434.50  Aligned_cols=261  Identities=21%  Similarity=0.237  Sum_probs=192.2

Q ss_pred             CeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCC-CCCCChHHHHHHHHcCCCCCccEEEEEeee
Q 005221          140 MYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKG-CNYGPPYEWQVYNTLGGSHGVPRVHFKGRQ  218 (708)
Q Consensus       140 ~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~-~~~~~~~Ei~il~~L~h~~~v~~~~~~~~~  218 (708)
                      +|++++.||+|+||+||+|++..          +++.||||+++..... ....+.+|+++|++|+|||+|..+..+...
T Consensus         6 dy~~~~~lG~G~fg~V~~a~~~~----------~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~   75 (299)
T 4g31_A            6 DFEPIQCLGRGGFGVVFEAKNKV----------DDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEK   75 (299)
T ss_dssp             HEEEEEEEEECC--EEEEEEETT----------TCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEE
T ss_pred             hCEEeeEEecCCCeEEEEEEECC----------CCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEec
Confidence            59999999999999999999987          7899999999765322 234577899999999999988888776543


Q ss_pred             C-----------CEEEEEEecC-CCCHHHHHhccCC--CCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCC
Q 005221          219 G-----------DYYVMVMDML-GPSLWDVWNNNSH--TMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPG  284 (708)
Q Consensus       219 ~-----------~~~~lvme~~-ggsL~~~l~~~~~--~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g  284 (708)
                      +           .++||||||| ||+|.+++.....  ..++..++.|+.||+.||+|||++|||||||||+||||+.++
T Consensus        76 ~~~~~~~~~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~IiHRDlKp~NILl~~~~  155 (299)
T 4g31_A           76 NTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDD  155 (299)
T ss_dssp             C----------CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTC
T ss_pred             CccccccccCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCcCccccCcHHHeEECCCC
Confidence            3           3589999999 9999999987542  345677899999999999999999999999999999999887


Q ss_pred             CCCCCcEEEeccCccccccCCCCCccc----cccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCC
Q 005221          285 TPDEKKLFLVDLGLATKWRDSTTGMHV----EYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPW  360 (708)
Q Consensus       285 ~~~~~~vkL~DFGla~~~~~~~~~~~~----~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLltG~~Pf  360 (708)
                           .+||+|||+|+.+.........    .........+||+.|||||++.+..|+.++|||||||+||||++   ||
T Consensus       156 -----~vKl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf  227 (299)
T 4g31_A          156 -----VVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PF  227 (299)
T ss_dssp             -----CEEECCCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CC
T ss_pred             -----cEEEccCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CC
Confidence                 5999999999987654322111    11122345789999999999999999999999999999999996   77


Q ss_pred             CCCCCCCchhhhhhhccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhHHH
Q 005221          361 QGYQGENKGFLVCKKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKLIY  440 (708)
Q Consensus       361 ~~~~~~~~~~~i~~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~~f  440 (708)
                      .+..  +....+......        ..|+.+..              ..+.+.+||.+||..||++|||+.|+|+||||
T Consensus       228 ~~~~--~~~~~~~~~~~~--------~~p~~~~~--------------~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~  283 (299)
T 4g31_A          228 STQM--ERVRTLTDVRNL--------KFPPLFTQ--------------KYPCEYVMVQDMLSPSPMERPEAINIIENAVF  283 (299)
T ss_dssp             SSHH--HHHHHHHHHHTT--------CCCHHHHH--------------HCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGG
T ss_pred             CCcc--HHHHHHHHHhcC--------CCCCCCcc--------------cCHHHHHHHHHHcCCChhHCcCHHHHhcCHhh
Confidence            6421  111111111110        11221111              12457889999999999999999999999998


Q ss_pred             Hh
Q 005221          441 QV  442 (708)
Q Consensus       441 ~~  442 (708)
                      +.
T Consensus       284 ~~  285 (299)
T 4g31_A          284 ED  285 (299)
T ss_dssp             CC
T ss_pred             CC
Confidence            64


No 11 
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00  E-value=1.4e-50  Score=439.84  Aligned_cols=287  Identities=23%  Similarity=0.274  Sum_probs=205.4

Q ss_pred             CCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCCCCCCChHHHHHHHHcCCCCCccEEEEEeee
Q 005221          139 PMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNTLGGSHGVPRVHFKGRQ  218 (708)
Q Consensus       139 ~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~~~~~~~~Ei~il~~L~h~~~v~~~~~~~~~  218 (708)
                      ++|+++++||+|+||+||+|++...       ..+++.||||.+.....  ...+.+|+++|+.+.++++|+.+++++.+
T Consensus        21 ~~Y~i~~~lG~G~fg~Vy~a~~~~~-------~~~~~~vAiK~i~~~~~--~~~~~~E~~~l~~~~~h~nIv~l~~~~~~   91 (361)
T 4f9c_A           21 NVFKIEDKIGEGTFSSVYLATAQLQ-------VGPEEKIALKHLIPTSH--PIRIAAELQCLTVAGGQDNVMGVKYCFRK   91 (361)
T ss_dssp             GTCEEEEEEEECSSEEEEEEEEEBT-------TSCEEEEEEEEECTTSC--HHHHHHHHHHHHHTCSBTTBCCCSEEEEE
T ss_pred             CcEEEEEEEecccCcEEEEEEEccc-------CCCCCEEEEEEEccccC--HHHHHHHHHHHHHhcCCCCCceEEEEEEE
Confidence            4799999999999999999998631       12578999999876532  23467899999999655556666777788


Q ss_pred             CCEEEEEEecC-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcEEEeccC
Q 005221          219 GDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLG  297 (708)
Q Consensus       219 ~~~~~lvme~~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~vkL~DFG  297 (708)
                      .+++||||||| |++|.+++.    .+++.+++.++.||+.||+|||++|||||||||+||||+.+.    ..+||+|||
T Consensus        92 ~~~~~lvmE~~~g~~L~~~~~----~l~~~~~~~~~~qll~al~ylH~~gIiHRDiKPeNiLl~~~~----~~~kl~DFG  163 (361)
T 4f9c_A           92 NDHVVIAMPYLEHESFLDILN----SLSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRL----KKYALVDFG  163 (361)
T ss_dssp             TTEEEEEEECCCCCCHHHHHT----TCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTT----TEEEECCCT
T ss_pred             CCEEEEEEeCCCcccHHHHHc----CCCHHHHHHHHHHHHHHHHHHHHCCeEeCcCCHHHeEEeCCC----CeEEECcCC
Confidence            99999999999 899999983    599999999999999999999999999999999999998653    269999999


Q ss_pred             ccccccCCCCCcc--------------------ccccCCCceeeccccccchhhhcCC-CCCchhhHHHHHHHHHHHHhC
Q 005221          298 LATKWRDSTTGMH--------------------VEYDQRPDVFRGTVRYASVHAHLGR-TGSRRDDLESLAYTLIFLLRG  356 (708)
Q Consensus       298 la~~~~~~~~~~~--------------------~~~~~~~~~~~GT~~Y~APE~~~~~-~~s~~~DIwSlGviL~eLltG  356 (708)
                      +|+...+......                    ..........+||+.|||||++.+. .|+.++|||||||+||||++|
T Consensus       164 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G  243 (361)
T 4f9c_A          164 LAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSG  243 (361)
T ss_dssp             TCEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHT
T ss_pred             CCcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHC
Confidence            9987654322110                    0001123356899999999999886 489999999999999999999


Q ss_pred             CCCCCCCCCC-CchhhhhhhccCCCC----------CCccCCC-ChHHHHHHHHHHcCCC----------------CCcc
Q 005221          357 RLPWQGYQGE-NKGFLVCKKKMATSP----------DGLCCFC-PAPFRQFVEYVVNLKF----------------DEEP  408 (708)
Q Consensus       357 ~~Pf~~~~~~-~~~~~i~~~~~~~~p----------~~l~~~~-p~~~~~l~~~~~~~~~----------------~~rP  408 (708)
                      ++||...++. +....+......+..          ....... ...+..+.+.....+.                ...+
T Consensus       244 ~~Pf~~~~~~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~  323 (361)
T 4f9c_A          244 RYPFYKASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATNLEGWN  323 (361)
T ss_dssp             CSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC----------------------CT
T ss_pred             CCCCCCCCCHHHHHHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhccccccccccccccccccccccccc
Confidence            9999654432 222222221110000          0000000 1112222222111110                0001


Q ss_pred             -cHHHHHHHHHhhhCCCCCCCCcchHHHHhHHHHh
Q 005221          409 -NYAKYISLFDGIVGPNPDIRPISTEGAQKLIYQV  442 (708)
Q Consensus       409 -~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~~f~~  442 (708)
                       -.+++++||.+||..||++|||+.|+|+||||+.
T Consensus       324 ~is~~a~DLl~~lL~~dP~~R~ta~eaL~Hp~f~~  358 (361)
T 4f9c_A          324 EVPDEAYDLLDKLLDLNPASRITAEEALLHPFFKD  358 (361)
T ss_dssp             TCCHHHHHHHHHHTCSCTTTSCCHHHHHTSGGGTT
T ss_pred             cCCHHHHHHHHHHCcCChhHCcCHHHHhcCcccCC
Confidence             1257899999999999999999999999999964


No 12 
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00  E-value=5e-51  Score=431.81  Aligned_cols=260  Identities=17%  Similarity=0.194  Sum_probs=196.4

Q ss_pred             CCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCCCCCCChHHHHHHHHcCCCCCccEEEEEeee
Q 005221          139 PMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNTLGGSHGVPRVHFKGRQ  218 (708)
Q Consensus       139 ~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~~~~~~~~Ei~il~~L~h~~~v~~~~~~~~~  218 (708)
                      ++|.+.++||+|+||.||+|++...     ....++..||||+++.........+.+|+++|++|+|||+|..+..+ .+
T Consensus        13 ~~~~l~~~lG~G~fG~Vy~a~~~~~-----~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~-~~   86 (299)
T 4asz_A           13 HNIVLKRELGEGAFGKVFLAECYNL-----CPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVC-VE   86 (299)
T ss_dssp             GGEEEEEEEEC--CCCEEEEEECSC-----C----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CS
T ss_pred             HHeEEeeEEeeCCCcEEEEEEECCc-----ccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEE-ee
Confidence            4799999999999999999997541     11125789999999866544455688999999999999977777665 55


Q ss_pred             CCEEEEEEecC-CCCHHHHHhccC------------CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCC
Q 005221          219 GDYYVMVMDML-GPSLWDVWNNNS------------HTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGT  285 (708)
Q Consensus       219 ~~~~~lvme~~-ggsL~~~l~~~~------------~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~  285 (708)
                      ++.+||||||| +|+|.+++...+            ..|++..++.|+.||+.||.|||+++||||||||+||||+.++ 
T Consensus        87 ~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDlKp~NILl~~~~-  165 (299)
T 4asz_A           87 GDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENL-  165 (299)
T ss_dssp             SSSEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGG-
T ss_pred             CCEEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccCHhhEEECCCC-
Confidence            67789999999 999999997532            4699999999999999999999999999999999999999877 


Q ss_pred             CCCCcEEEeccCccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCC
Q 005221          286 PDEKKLFLVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLR-GRLPWQGYQ  364 (708)
Q Consensus       286 ~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLlt-G~~Pf~~~~  364 (708)
                          .+||+|||+|+........      ......+||+.|||||++.+..|+.++|||||||+||||+| |++||.+.+
T Consensus       166 ----~~Ki~DFGla~~~~~~~~~------~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~  235 (299)
T 4asz_A          166 ----LVKIGDFGMSRDVYSTDYY------RVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLS  235 (299)
T ss_dssp             ----CEEECCCSCHHHHTGGGCE------EETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSC
T ss_pred             ----cEEECCcccceecCCCCce------eecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCC
Confidence                5999999999876443221      11224679999999999999999999999999999999998 999999877


Q ss_pred             CCCchhhhhhhccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHh
Q 005221          365 GENKGFLVCKKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDG  419 (708)
Q Consensus       365 ~~~~~~~i~~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~  419 (708)
                      ..+....+........    +..+|+.+.+++..||+.+|.+||++.++...|+.
T Consensus       236 ~~~~~~~i~~~~~~~~----p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~  286 (299)
T 4asz_A          236 NNEVIECITQGRVLQR----PRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQN  286 (299)
T ss_dssp             HHHHHHHHHHTCCCCC----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCCCCC----CccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence            6655555555443322    23455544444444444444444443333333333


No 13 
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00  E-value=4.9e-50  Score=424.97  Aligned_cols=255  Identities=20%  Similarity=0.226  Sum_probs=197.2

Q ss_pred             CCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCC--CCCCCChHHHHHHHHcCCCCCccEEEEE
Q 005221          138 SPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSK--GCNYGPPYEWQVYNTLGGSHGVPRVHFK  215 (708)
Q Consensus       138 ~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~--~~~~~~~~Ei~il~~L~h~~~v~~~~~~  215 (708)
                      .+++++.++||+|+||+||+|++..             .||||+++....  .....+.+|+.+|++|+|+|+|..+.++
T Consensus        35 ~~~l~l~~~iG~G~fG~Vy~~~~~~-------------~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~  101 (307)
T 3omv_A           35 ASEVMLSTRIGSGSFGTVYKGKWHG-------------DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYM  101 (307)
T ss_dssp             TTSCCEEEECCCCSSSEEEEEESSS-------------EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE
T ss_pred             HHHeEEeeEEeeCCCcEEEEEEECC-------------cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEE
Confidence            3578999999999999999998633             599999875422  1234578999999999999988877654


Q ss_pred             eeeCCEEEEEEecC-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcEEEe
Q 005221          216 GRQGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLV  294 (708)
Q Consensus       216 ~~~~~~~~lvme~~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~vkL~  294 (708)
                       . .+.++|||||| ||+|.+++......+++..+..|+.||+.||+|||++|||||||||+||||+.++     .+||+
T Consensus       102 -~-~~~~~iVmEy~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH~~~IiHRDlKp~NILl~~~~-----~~Ki~  174 (307)
T 3omv_A          102 -T-KDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGL-----TVKIG  174 (307)
T ss_dssp             -C-SSSCEEEEECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCSSSEEEETTE-----EEEEC
T ss_pred             -E-CCeEEEEEEcCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccCCccCHHHEEECCCC-----cEEEe
Confidence             3 34578999999 9999999987766899999999999999999999999999999999999999877     69999


Q ss_pred             ccCccccccCCCCCccccccCCCceeeccccccchhhhcC---CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCchhh
Q 005221          295 DLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLG---RTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFL  371 (708)
Q Consensus       295 DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~---~~~s~~~DIwSlGviL~eLltG~~Pf~~~~~~~~~~~  371 (708)
                      |||+|+........      ......+||+.|||||++.+   ..|+.++|||||||+||||+||++||.+.+.......
T Consensus       175 DFGla~~~~~~~~~------~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~  248 (307)
T 3omv_A          175 DFGLATVKSRWSGS------QQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIF  248 (307)
T ss_dssp             CCSSCBC------------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHH
T ss_pred             eccCceecccCCcc------eeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHH
Confidence            99999876543221      12235679999999999975   3689999999999999999999999998665444333


Q ss_pred             hhhhcc-CCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhHH
Q 005221          372 VCKKKM-ATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKLI  439 (708)
Q Consensus       372 i~~~~~-~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~~  439 (708)
                      +..... .+....+...+|                     ..+.+|+.+||..||++|||+.|+++++.
T Consensus       249 ~~~~~~~~p~~~~~~~~~~---------------------~~l~~li~~cl~~dP~~RPs~~ei~~~Le  296 (307)
T 3omv_A          249 MVGRGYASPDLSKLYKNCP---------------------KAMKRLVADCVKKVKEERPLFPQILSSIE  296 (307)
T ss_dssp             HHHTTCCCCCSTTSCTTSC---------------------HHHHHHHHHHTCSSSTTSCCHHHHHHHHH
T ss_pred             HHhcCCCCCCcccccccch---------------------HHHHHHHHHHcCCCHhHCcCHHHHHHHHH
Confidence            333222 222223333444                     35677888888888888888888877754


No 14 
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00  E-value=2.3e-50  Score=463.51  Aligned_cols=262  Identities=20%  Similarity=0.235  Sum_probs=218.7

Q ss_pred             CCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCCCCCCChHHHHHHHHcCCCCCccEEEEEeee
Q 005221          139 PMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNTLGGSHGVPRVHFKGRQ  218 (708)
Q Consensus       139 ~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~~~~~~~~Ei~il~~L~h~~~v~~~~~~~~~  218 (708)
                      ++|++++.||+|+||.||+|+++.          +++.||||++..........+.+|+++|+.|+|+|+|.. +.++.+
T Consensus       157 ~~Y~i~~~lG~G~fg~V~~~~~~~----------tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l-~~~~~~  225 (573)
T 3uto_A          157 DHYDIHEELGTGAFGVVHRVTERA----------TGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNL-HDAFED  225 (573)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETT----------TCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCE-EEEEEC
T ss_pred             cccEEEEEEeeccCeEEEEEEECC----------CCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeE-EEEEEE
Confidence            579999999999999999999988          899999999976543334457789999999999986655 555578


Q ss_pred             CCEEEEEEecC-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcEEEeccC
Q 005221          219 GDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLG  297 (708)
Q Consensus       219 ~~~~~lvme~~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~vkL~DFG  297 (708)
                      .+.+||||||| ||+|.+++......|++..++.|+.||+.||+|||++|||||||||+||||+.+.   ...+||+|||
T Consensus       226 ~~~~~iv~E~~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHRDlKp~Nill~~~~---~~~vKl~DFG  302 (573)
T 3uto_A          226 DNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKR---SNELKLIDFG  302 (573)
T ss_dssp             SSEEEEEEECCCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSS---CCCEEECCCS
T ss_pred             CCEEEEEEeecCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhccccCCC---CCCEEEeecc
Confidence            88999999999 8999999987666799999999999999999999999999999999999998642   1269999999


Q ss_pred             ccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhhcc
Q 005221          298 LATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCKKKM  377 (708)
Q Consensus       298 la~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLltG~~Pf~~~~~~~~~~~i~~~~~  377 (708)
                      +|+.+.....         ....+||+.|||||++.+..|+.++|||||||+||+||+|++||.+.+..+....+.....
T Consensus       303 ~a~~~~~~~~---------~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~~~i~~~~~  373 (573)
T 3uto_A          303 LTAHLDPKQS---------VKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDW  373 (573)
T ss_dssp             SCEECCTTSE---------EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCC
T ss_pred             ceeEccCCCc---------eeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHhCCC
Confidence            9998765422         2357899999999999999999999999999999999999999998766555555544433


Q ss_pred             CCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhHHHHhccc
Q 005221          378 ATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKLIYQVGHK  445 (708)
Q Consensus       378 ~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~~f~~~~~  445 (708)
                      ...+..+ ..+                     ...+++||.+||..||.+|||+.|+|+||||+....
T Consensus       374 ~~~~~~~-~~~---------------------s~~~~dli~~~L~~dp~~R~t~~e~l~Hpw~~~~~~  419 (573)
T 3uto_A          374 NMDDSAF-SGI---------------------SEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNA  419 (573)
T ss_dssp             CCCSGGG-TTS---------------------CHHHHHHHHTTSCSSGGGSCCHHHHHHSTTTSCCCC
T ss_pred             CCCcccc-cCC---------------------CHHHHHHHHHHccCChhHCcCHHHHhcCcCcCCCCC
Confidence            3222211 111                     147899999999999999999999999999986554


No 15 
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00  E-value=7.9e-50  Score=428.27  Aligned_cols=258  Identities=17%  Similarity=0.202  Sum_probs=194.8

Q ss_pred             CCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCCCCCCChHHHHHHHHcCCCCCccEEEEEeee
Q 005221          139 PMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNTLGGSHGVPRVHFKGRQ  218 (708)
Q Consensus       139 ~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~~~~~~~~Ei~il~~L~h~~~v~~~~~~~~~  218 (708)
                      .+|.+.++||+|+||+||+|++...     ....+++.||||+++.........+.+|+++|++|+|+|+|..+..+ .+
T Consensus        41 ~d~~l~~~LG~G~fG~Vy~a~~~~~-----~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~-~~  114 (329)
T 4aoj_A           41 RDIVLKWELGEGAFGKVFLAECHNL-----LPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVC-TE  114 (329)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEESSS-----CC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CS
T ss_pred             HHeEEEEEEccCCCcEEEEEEECCc-----ccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEE-EE
Confidence            4699999999999999999997531     11225789999999866544455688999999999999977777665 56


Q ss_pred             CCEEEEEEecC-CCCHHHHHhccC--------------CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCC
Q 005221          219 GDYYVMVMDML-GPSLWDVWNNNS--------------HTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPP  283 (708)
Q Consensus       219 ~~~~~lvme~~-ggsL~~~l~~~~--------------~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~  283 (708)
                      ++.+||||||| +|+|.+++....              ..|++..++.|+.||+.||.|||+++||||||||+||||+.+
T Consensus       115 ~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLKp~NILl~~~  194 (329)
T 4aoj_A          115 GRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQG  194 (329)
T ss_dssp             SSSEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETT
T ss_pred             CCEEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHhhEEECCC
Confidence            67799999999 999999997542              359999999999999999999999999999999999999987


Q ss_pred             CCCCCCcEEEeccCccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCC
Q 005221          284 GTPDEKKLFLVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLR-GRLPWQG  362 (708)
Q Consensus       284 g~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLlt-G~~Pf~~  362 (708)
                      +     .+||+|||+|+........      ......+||+.|||||++.+..|+.++|||||||+||||+| |++||.+
T Consensus       195 ~-----~~Ki~DFGla~~~~~~~~~------~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~  263 (329)
T 4aoj_A          195 L-----VVKIGDFGMSRDIYSTDYY------RVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQ  263 (329)
T ss_dssp             T-----EEEECCCC----------------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCS
T ss_pred             C-----cEEEcccccceeccCCCcc------eecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCC
Confidence            7     6999999999876543221      11234679999999999999999999999999999999999 9999998


Q ss_pred             CCCCCchhhhhhhccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhH
Q 005221          363 YQGENKGFLVCKKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKL  438 (708)
Q Consensus       363 ~~~~~~~~~i~~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~  438 (708)
                      .+..+....+.......    .+..+|+                     ++.+|+.+|+..||++|||+.|+++++
T Consensus       264 ~~~~~~~~~i~~g~~~~----~p~~~~~---------------------~~~~li~~cl~~dP~~RPs~~ei~~~L  314 (329)
T 4aoj_A          264 LSNTEAIDCITQGRELE----RPRACPP---------------------EVYAIMRGCWQREPQQRHSIKDVHARL  314 (329)
T ss_dssp             SCHHHHHHHHHHTCCCC----CCTTCCH---------------------HHHHHHHHHCCSSTTTSCCHHHHHHHH
T ss_pred             CCHHHHHHHHHcCCCCC----CcccccH---------------------HHHHHHHHHcCcChhHCcCHHHHHHHH
Confidence            76655555554443222    2234554                     455666666666666666666666553


No 16 
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00  E-value=3.8e-49  Score=419.19  Aligned_cols=258  Identities=19%  Similarity=0.175  Sum_probs=201.4

Q ss_pred             CCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCC-CCCCChHHHHHHHHcCCCCCccEEEEEee
Q 005221          139 PMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKG-CNYGPPYEWQVYNTLGGSHGVPRVHFKGR  217 (708)
Q Consensus       139 ~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~-~~~~~~~Ei~il~~L~h~~~v~~~~~~~~  217 (708)
                      ..++++++||+|+||+||+|+....     ....+++.||||.++..... ....+.+|+.+|.+|+|||+|..++.+ .
T Consensus        26 ~~~~~~~~lG~G~fG~Vykg~~~~~-----~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~-~   99 (308)
T 4gt4_A           26 SAVRFMEELGEDRFGKVYKGHLFGP-----APGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVV-T   99 (308)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEEC------------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEE-C
T ss_pred             HHCeEeeEeccCCCcEEEEEEEcCC-----ccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEE-E
Confidence            3689999999999999999987431     11225789999999765332 234588999999999999988777766 4


Q ss_pred             eCCEEEEEEecC-CCCHHHHHhcc---------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeC
Q 005221          218 QGDYYVMVMDML-GPSLWDVWNNN---------------SHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLG  281 (708)
Q Consensus       218 ~~~~~~lvme~~-ggsL~~~l~~~---------------~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~  281 (708)
                      .++.++|||||| +|+|.++|...               ...|++..+..|+.||+.||+|||+++||||||||+||||+
T Consensus       100 ~~~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLK~~NILl~  179 (308)
T 4gt4_A          100 KDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVY  179 (308)
T ss_dssp             SSSSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC
T ss_pred             ECCEEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCccccceEEC
Confidence            566789999999 99999999643               13599999999999999999999999999999999999999


Q ss_pred             CCCCCCCCcEEEeccCccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCC
Q 005221          282 PPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLR-GRLPW  360 (708)
Q Consensus       282 ~~g~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLlt-G~~Pf  360 (708)
                      .++     .+||+|||+|+........      ......+||+.|||||++.+..|+.++|||||||+||||+| |+.||
T Consensus       180 ~~~-----~~Ki~DFGlar~~~~~~~~------~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf  248 (308)
T 4gt4_A          180 DKL-----NVKISDLGLFREVYAADYY------KLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPY  248 (308)
T ss_dssp             GGG-----CEEECCSCCBCGGGGGGCB------CSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTT
T ss_pred             CCC-----CEEECCcccceeccCCCce------eEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCC
Confidence            877     5999999999876543211      12234679999999999999999999999999999999998 89999


Q ss_pred             CCCCCCCchhhhhhhccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhH
Q 005221          361 QGYQGENKGFLVCKKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKL  438 (708)
Q Consensus       361 ~~~~~~~~~~~i~~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~  438 (708)
                      .+.+..+....+......+.    +..+|.                     .+.+|+.+|+..||++|||+.|+++++
T Consensus       249 ~~~~~~~~~~~i~~~~~~~~----p~~~~~---------------------~~~~li~~C~~~dP~~RPs~~ei~~~L  301 (308)
T 4gt4_A          249 CGYSNQDVVEMIRNRQVLPC----PDDCPA---------------------WVYALMIECWNEFPSRRPRFKDIHSRL  301 (308)
T ss_dssp             TTCCHHHHHHHHHTTCCCCC----CTTCCH---------------------HHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             CCCCHHHHHHHHHcCCCCCC----cccchH---------------------HHHHHHHHHcCCChhHCcCHHHHHHHH
Confidence            98776655555554433322    234554                     456667777777777777777776664


No 17 
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00  E-value=1.5e-48  Score=447.97  Aligned_cols=257  Identities=24%  Similarity=0.286  Sum_probs=204.1

Q ss_pred             CCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCC---CCCCCCChHH---HHHHHHcCCCCCccE
Q 005221          138 SPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSS---KGCNYGPPYE---WQVYNTLGGSHGVPR  211 (708)
Q Consensus       138 ~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~---~~~~~~~~~E---i~il~~L~h~~~v~~  211 (708)
                      .++|++++.||+|+||.||+|++..          +++.||||++.+..   ........+|   +.+++.++|||+| .
T Consensus       188 lddf~i~k~LG~G~fG~V~la~~~~----------tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV-~  256 (689)
T 3v5w_A          188 MNDFSVHRIIGRGGFGEVYGCRKAD----------TGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIV-C  256 (689)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETT----------TCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBC-C
T ss_pred             hHHeEEEEEEecccCeEEEEEEECC----------CCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEe-E
Confidence            3579999999999999999999988          89999999997642   1112223344   4445556777755 5


Q ss_pred             EEEEeeeCCEEEEEEecC-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCc
Q 005221          212 VHFKGRQGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKK  290 (708)
Q Consensus       212 ~~~~~~~~~~~~lvme~~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~  290 (708)
                      +++.+.+.+.+||||||| ||+|.++|.+.+ .|++..++.|+.||+.||+|||++|||||||||+||||+.+|     .
T Consensus       257 l~~~f~~~~~lylVmEy~~GGdL~~~l~~~~-~l~E~~a~~y~~qIl~aL~yLH~~gIiHRDLKPeNILld~~G-----~  330 (689)
T 3v5w_A          257 MSYAFHTPDKLSFILDLMNGGDLHYHLSQHG-VFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHG-----H  330 (689)
T ss_dssp             EEEEEECSSEEEEEECCCCSCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTS-----C
T ss_pred             EEEEEEECCEEEEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHeEEeCCC-----C
Confidence            555668888999999999 999999998775 699999999999999999999999999999999999999888     5


Q ss_pred             EEEeccCccccccCCCCCccccccCCCceeeccccccchhhhc-CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCch
Q 005221          291 LFLVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHL-GRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKG  369 (708)
Q Consensus       291 vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~-~~~~s~~~DIwSlGviL~eLltG~~Pf~~~~~~~~~  369 (708)
                      +||+|||+|+.+....          ..++|||+.|||||++. +..|+.++|||||||+||||++|++||.+.+..+..
T Consensus       331 vKL~DFGlA~~~~~~~----------~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~  400 (689)
T 3v5w_A          331 VRISDLGLACDFSKKK----------PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH  400 (689)
T ss_dssp             EEECCCTTCEECSSCC----------CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHH
T ss_pred             EEecccceeeecCCCC----------CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHH
Confidence            9999999998765432          23578999999999997 468999999999999999999999999875544332


Q ss_pred             hhhhhhccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCc-----chHHHHhHHHHhcc
Q 005221          370 FLVCKKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPI-----STEGAQKLIYQVGH  444 (708)
Q Consensus       370 ~~i~~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps-----~~e~l~h~~f~~~~  444 (708)
                      . +........+ .++..+                     ..++++||.+||..||.+|++     +.|+++||||....
T Consensus       401 ~-i~~~i~~~~~-~~p~~~---------------------S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~HpfF~~id  457 (689)
T 3v5w_A          401 E-IDRMTLTMAV-ELPDSF---------------------SPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLD  457 (689)
T ss_dssp             H-HHHHHHHCCC-CCCTTS---------------------CHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTSGGGTTCC
T ss_pred             H-HHHhhcCCCC-CCCccC---------------------CHHHHHHHHHHccCCHhHCCCCCCCCHHHHhcCccccCCC
Confidence            2 1111111111 111111                     247899999999999999998     69999999997543


No 18 
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00  E-value=1.4e-48  Score=422.20  Aligned_cols=261  Identities=17%  Similarity=0.205  Sum_probs=202.7

Q ss_pred             CCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCC-CCCCChHHHHHHHHcCCCC-CccEEEEE
Q 005221          138 SPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKG-CNYGPPYEWQVYNTLGGSH-GVPRVHFK  215 (708)
Q Consensus       138 ~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~-~~~~~~~Ei~il~~L~h~~-~v~~~~~~  215 (708)
                      .++|+++++||+|+||.||+|++...     ....+++.||||.+...... ....+.+|+.+|.+|.|++ +|..++.+
T Consensus        63 ~~~~~l~~~LG~G~fG~Vy~a~~~~~-----~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~  137 (353)
T 4ase_A           63 RDRLKLGKPLGRGAFGQVIEADAFGI-----DKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGAC  137 (353)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEETS-----SSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             HHHeEEeeEEecCCCeEEEEEEEcCC-----CcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEE
Confidence            45799999999999999999998752     11225678999999765322 2335788999999998865 55555556


Q ss_pred             eeeCCEEEEEEecC-CCCHHHHHhcc---------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEE
Q 005221          216 GRQGDYYVMVMDML-GPSLWDVWNNN---------------SHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFL  279 (708)
Q Consensus       216 ~~~~~~~~lvme~~-ggsL~~~l~~~---------------~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NIL  279 (708)
                      ...++.++|||||| +|+|.++|...               ...|++..+..|+.||+.||+|||+++||||||||+|||
T Consensus       138 ~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~iiHRDLK~~NIL  217 (353)
T 4ase_A          138 TKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNIL  217 (353)
T ss_dssp             CCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEE
T ss_pred             EecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCCeecCccCcccee
Confidence            56677899999999 99999999753               235899999999999999999999999999999999999


Q ss_pred             eCCCCCCCCCcEEEeccCccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCC
Q 005221          280 LGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLR-GRL  358 (708)
Q Consensus       280 l~~~g~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLlt-G~~  358 (708)
                      |+.++     .+||+|||+|+.+.......      .....+||+.|||||++.+..|+.++|||||||+||||+| |++
T Consensus       218 l~~~~-----~vKi~DFGlar~~~~~~~~~------~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~  286 (353)
T 4ase_A          218 LSEKN-----VVKICDFGLARDIYKDPDYV------RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGAS  286 (353)
T ss_dssp             ECGGG-----CEEECCCGGGSCTTTCTTSE------EETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCC
T ss_pred             eCCCC-----CEEECcchhhhhcccCCCce------eeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCC
Confidence            99877     59999999999765543221      1234679999999999999999999999999999999998 999


Q ss_pred             CCCCCCCCCchhhhhhhccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhH
Q 005221          359 PWQGYQGENKGFLVCKKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKL  438 (708)
Q Consensus       359 Pf~~~~~~~~~~~i~~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~  438 (708)
                      ||.+.+.......+.......   ..+..+|                     .++.+|+.+|+..||++|||+.|+++|+
T Consensus       287 Pf~~~~~~~~~~~~i~~g~~~---~~p~~~~---------------------~~~~~li~~c~~~dP~~RPt~~eil~~L  342 (353)
T 4ase_A          287 PYPGVKIDEEFCRRLKEGTRM---RAPDYTT---------------------PEMYQTMLDCWHGEPSQRPTFSELVEHL  342 (353)
T ss_dssp             SSTTCCCSHHHHHHHHHTCCC---CCCTTCC---------------------HHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHcCCCC---CCCccCC---------------------HHHHHHHHHHcCcChhHCcCHHHHHHHH
Confidence            999866544333222221111   1222344                     3567777788888888888888888774


No 19 
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00  E-value=4.5e-47  Score=402.91  Aligned_cols=264  Identities=19%  Similarity=0.206  Sum_probs=195.0

Q ss_pred             CCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCCCCCCChHHHHHHHHcCCCCCccEEEEEeee
Q 005221          139 PMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNTLGGSHGVPRVHFKGRQ  218 (708)
Q Consensus       139 ~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~~~~~~~~Ei~il~~L~h~~~v~~~~~~~~~  218 (708)
                      .+|.+.++||+|+||+||+|++            +++.||||++...... ......|+.++.+|+|+|+|..+..+...
T Consensus         3 r~i~L~~~iG~G~fG~Vy~~~~------------~g~~VAvK~l~~~~~~-~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~   69 (303)
T 3hmm_A            3 RTIVLQESIGKGRFGEVWRGKW------------RGEEVAVKIFSSREER-SWFREAEIYQTVMLRHENILGFIAADNKD   69 (303)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEE------------TTEEEEEEEECGGGHH-HHHHHHHHHTSTTCCCTTBCCEEEEEEEE
T ss_pred             cEEEEEEEEeeCCCeEEEEEEE------------CCEEEEEEEECccchh-hHHHHHHHHHHhcCCCCCCCcEEEEEEec
Confidence            3699999999999999999987            4689999998754321 11233456666789999998888887655


Q ss_pred             C---CEEEEEEecC-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC--------CceecCCCCCcEEeCCCCCC
Q 005221          219 G---DYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSK--------GYVHGDVKPENFLLGPPGTP  286 (708)
Q Consensus       219 ~---~~~~lvme~~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~--------gIvHrDIKP~NILl~~~g~~  286 (708)
                      +   ..+||||||| +|+|.+++...  .++++.+..|+.|++.||+|||++        |||||||||+||||+.++  
T Consensus        70 ~~~~~~~~lV~Ey~~~gsL~~~l~~~--~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~--  145 (303)
T 3hmm_A           70 NGTWTQLWLVSDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNG--  145 (303)
T ss_dssp             CSSSEEEEEEEECCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTS--
T ss_pred             CCCceEEEEEecCCCCCcHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCC--
Confidence            4   3789999999 89999999874  599999999999999999999987        999999999999999888  


Q ss_pred             CCCcEEEeccCccccccCCCCCccccccCCCceeeccccccchhhhcCC------CCCchhhHHHHHHHHHHHHhCCCCC
Q 005221          287 DEKKLFLVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGR------TGSRRDDLESLAYTLIFLLRGRLPW  360 (708)
Q Consensus       287 ~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~------~~s~~~DIwSlGviL~eLltG~~Pf  360 (708)
                         .+||+|||+|+..........    ......+||+.|||||++.+.      .++.++|||||||+||||+||.+||
T Consensus       146 ---~~Ki~DFGla~~~~~~~~~~~----~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~  218 (303)
T 3hmm_A          146 ---TCCIADLGLAVRHDSATDTID----IAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIG  218 (303)
T ss_dssp             ---CEEECCCTTCEEEETTTTEES----CC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBT
T ss_pred             ---CEEEEeCCCCccccCCCCcee----eecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCC
Confidence               599999999987765432211    223356799999999999865      3678999999999999999999988


Q ss_pred             CCCCCCCchhhhhhhccCCCCCCccCCCChHHHHHHHHHHcCCC----CCc----ccHHHHHHHHHhhhCCCCCCCCcch
Q 005221          361 QGYQGENKGFLVCKKKMATSPDGLCCFCPAPFRQFVEYVVNLKF----DEE----PNYAKYISLFDGIVGPNPDIRPIST  432 (708)
Q Consensus       361 ~~~~~~~~~~~i~~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~----~~r----P~~~~l~~LL~~mL~~dP~~Rps~~  432 (708)
                      .........+...          ..  ....+..+...+.....    ..+    +....+.+|+.+|+..||++|||+.
T Consensus       219 ~~~~~~~~p~~~~----------~~--~~~~~~~~~~~~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~  286 (303)
T 3hmm_A          219 GIHEDYQLPYYDL----------VP--SDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTAL  286 (303)
T ss_dssp             TBCCCCCCTTTTT----------SC--SSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHH
T ss_pred             Cccccccccchhc----------cc--ccchHHHHHHHHhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHH
Confidence            7544322111000          00  00112222222221111    111    1124688999999999999999999


Q ss_pred             HHHHhH
Q 005221          433 EGAQKL  438 (708)
Q Consensus       433 e~l~h~  438 (708)
                      |+++.+
T Consensus       287 ei~~~L  292 (303)
T 3hmm_A          287 RIKKTL  292 (303)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            998875


No 20 
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00  E-value=2e-45  Score=394.69  Aligned_cols=255  Identities=22%  Similarity=0.284  Sum_probs=210.3

Q ss_pred             CCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCC--CCCCCChHHHHHHHHcCCCCCccEEEEEe
Q 005221          139 PMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSK--GCNYGPPYEWQVYNTLGGSHGVPRVHFKG  216 (708)
Q Consensus       139 ~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~--~~~~~~~~Ei~il~~L~h~~~v~~~~~~~  216 (708)
                      ++|++++.||+|+||.||+|++..          +++.||||++.....  .....+.+|+.+|+.++|+|++..+.. .
T Consensus        15 ~~y~~~~~lG~G~~g~V~~a~~~~----------~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~-~   83 (328)
T 3fe3_A           15 GNYRLLKTIGKGNFAKVKLARHIL----------TGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV-I   83 (328)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETT----------TCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEE-E
T ss_pred             CCEEEEEEEeeCCCEEEEEEEECC----------CCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEE-E
Confidence            379999999999999999999977          789999999976522  122346789999999999886665555 5


Q ss_pred             eeCCEEEEEEecC-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcEEEec
Q 005221          217 RQGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVD  295 (708)
Q Consensus       217 ~~~~~~~lvme~~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~vkL~D  295 (708)
                      ...+.+++||||+ |++|.+++...+ .+++..++.++.||+.||+|||++||+||||||+|||++.++     .+||+|
T Consensus        84 ~~~~~~~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~NIll~~~~-----~~kl~D  157 (328)
T 3fe3_A           84 ETEKTLYLIMEYASGGEVFDYLVAHG-RMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADM-----NIKIAD  157 (328)
T ss_dssp             ECSSEEEEEECCCTTCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTS-----CEEECS
T ss_pred             EECCEEEEEEECCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCEeccCCCHHHEEEcCCC-----CEEEee
Confidence            6788899999999 899999997765 699999999999999999999999999999999999999887     599999


Q ss_pred             cCccccccCCCCCccccccCCCceeeccccccchhhhcCCCCC-chhhHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhh
Q 005221          296 LGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGS-RRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCK  374 (708)
Q Consensus       296 FGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s-~~~DIwSlGviL~eLltG~~Pf~~~~~~~~~~~i~~  374 (708)
                      ||+++.......         ....+||+.|+|||++.+..++ .++|||||||+||+|++|++||.+.+.......+..
T Consensus       158 FG~a~~~~~~~~---------~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~  228 (328)
T 3fe3_A          158 FGFSNEFTVGGK---------LDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLR  228 (328)
T ss_dssp             TTCCGGGSSSCG---------GGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH
T ss_pred             ccCceecCCCCc---------cccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHh
Confidence            999987654322         1246799999999999998875 899999999999999999999988654443333333


Q ss_pred             hccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhHHHHhccc
Q 005221          375 KKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKLIYQVGHK  445 (708)
Q Consensus       375 ~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~~f~~~~~  445 (708)
                      ..... |    ..+                     ...+.+||.+||..||.+|||+.|+++||||+....
T Consensus       229 ~~~~~-p----~~~---------------------s~~~~~li~~~L~~dP~~R~t~~eil~h~~~~~~~~  273 (328)
T 3fe3_A          229 GKYRI-P----FYM---------------------STDCENLLKRFLVLNPIKRGTLEQIMKDRWINAGHE  273 (328)
T ss_dssp             CCCCC-C----TTS---------------------CHHHHHHHHHHCCSSTTTSCCHHHHTTCTTTTTTCT
T ss_pred             CCCCC-C----CCC---------------------CHHHHHHHHHHCCCChhHCcCHHHHhcCHhhcCCCc
Confidence            22211 1    111                     247889999999999999999999999999986553


No 21 
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00  E-value=3.8e-45  Score=395.53  Aligned_cols=257  Identities=22%  Similarity=0.260  Sum_probs=204.3

Q ss_pred             CCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCC-CCCCCChHHHHHHHHcCCCCCccEEEEEe
Q 005221          138 SPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSK-GCNYGPPYEWQVYNTLGGSHGVPRVHFKG  216 (708)
Q Consensus       138 ~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~-~~~~~~~~Ei~il~~L~h~~~v~~~~~~~  216 (708)
                      .++|++++.||+|+||.||+|++..          +++.||||++..... .....+.+|+++|+.|+|+|++..+.. .
T Consensus         9 ~~~y~i~~~lG~G~~g~V~~a~~~~----------~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~-~   77 (347)
T 3zgw_A            9 LKYYELHETIGTGGFAKVKLACHIL----------TGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHV-L   77 (347)
T ss_dssp             TTTEEEEEEEEECSSCEEEEEEETT----------TCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEE-E
T ss_pred             hcCeEEEEEEEcCCCeEEEEEEECC----------CCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEE-E
Confidence            3579999999999999999999987          789999999977532 234457899999999999886665554 4


Q ss_pred             eeCCEEEEEEecC-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcEEEec
Q 005221          217 RQGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVD  295 (708)
Q Consensus       217 ~~~~~~~lvme~~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~vkL~D  295 (708)
                      ...+.++|||||+ |++|.+++...+ .+++..++.++.||+.||.|||++||+||||||+|||++.++     .+||+|
T Consensus        78 ~~~~~~~lv~E~~~gg~L~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~-----~~kL~D  151 (347)
T 3zgw_A           78 ETANKIFMVLEYCPGGELFDYIISQD-RLSEEETRVVFRQIVSAVAYVHSQGYAHRDLKPENLLFDEYH-----KLKLID  151 (347)
T ss_dssp             ECSSEEEEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTS-----CEEECC
T ss_pred             EeCCEEEEEEeCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCeEeCCccHHHEEEcCCC-----CEEEEe
Confidence            7778899999999 999999997765 699999999999999999999999999999999999998877     599999


Q ss_pred             cCccccccCCCCCccccccCCCceeeccccccchhhhcCCCC-CchhhHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhh
Q 005221          296 LGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTG-SRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCK  374 (708)
Q Consensus       296 FGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~-s~~~DIwSlGviL~eLltG~~Pf~~~~~~~~~~~i~~  374 (708)
                      ||++.........       .....+||+.|+|||++.+..+ +.++|||||||+||+|++|.+||.+.+.......+..
T Consensus       152 FG~a~~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~~~~i~~  224 (347)
T 3zgw_A          152 FGLCAKPKGNKDY-------HLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMR  224 (347)
T ss_dssp             CTTCBC---------------------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH
T ss_pred             ccCcccccCCCCc-------cccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHc
Confidence            9999865443221       1234679999999999998886 8999999999999999999999987554443333333


Q ss_pred             hccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhHHHHhcc
Q 005221          375 KKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKLIYQVGH  444 (708)
Q Consensus       375 ~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~~f~~~~  444 (708)
                      .....     +..+                     ...+.+||.+||..||.+|||+.|+++||||....
T Consensus       225 ~~~~~-----p~~~---------------------s~~~~~li~~~L~~dP~~Rps~~eil~hp~~~~~~  268 (347)
T 3zgw_A          225 GKYDV-----PKWL---------------------SPSSILLLQQMLQVDPKKRISMKNLLNHPWIMQDY  268 (347)
T ss_dssp             TCCCC-----CTTC---------------------CHHHHHHHHHHTCSSGGGSCCHHHHHTCHHHHTTT
T ss_pred             CCCCC-----CCCC---------------------CHHHHHHHHHHcccCHhHCcCHHHHhcCcchhcCC
Confidence            32211     1111                     14678999999999999999999999999998654


No 22 
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00  E-value=3e-45  Score=398.42  Aligned_cols=260  Identities=17%  Similarity=0.178  Sum_probs=211.1

Q ss_pred             CCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCCC------CCCChHHHHHHHHcCCCCCccEE
Q 005221          139 PMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGC------NYGPPYEWQVYNTLGGSHGVPRV  212 (708)
Q Consensus       139 ~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~~------~~~~~~Ei~il~~L~h~~~v~~~  212 (708)
                      ++|++++.||+|+||.||+|++..          +++.||+|++.......      ...+.+|+.+|+.|+|+|++..+
T Consensus        12 ~~y~~~~~LG~G~fg~V~~~~~~~----------~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~   81 (361)
T 2yab_A           12 DFYDIGEELGSGQFAIVKKCREKS----------TGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLH   81 (361)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETT----------TCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEE
T ss_pred             hceEEeeEEeeCcCEEEEEEEECC----------CCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEE
Confidence            479999999999999999999987          78999999998764321      12467899999999998866655


Q ss_pred             EEEeeeCCEEEEEEecC-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcE
Q 005221          213 HFKGRQGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKL  291 (708)
Q Consensus       213 ~~~~~~~~~~~lvme~~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~v  291 (708)
                      . ++.....++|||||+ |++|.+++...+ .+++..++.++.||+.||.|||++||+||||||+|||++.++. ....+
T Consensus        82 ~-~~~~~~~~~lv~e~~~gg~L~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~-~~~~v  158 (361)
T 2yab_A           82 D-VYENRTDVVLILELVSGGELFDFLAQKE-SLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNI-PIPHI  158 (361)
T ss_dssp             E-EEECSSEEEEEEECCCSCBHHHHHTTCS-CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTS-SSCCE
T ss_pred             E-EEEeCCEEEEEEEcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeCCCC-CccCE
Confidence            4 457788999999999 999999997654 6999999999999999999999999999999999999987652 22369


Q ss_pred             EEeccCccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCchhh
Q 005221          292 FLVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFL  371 (708)
Q Consensus       292 kL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLltG~~Pf~~~~~~~~~~~  371 (708)
                      ||+|||+++.......         ....+||+.|+|||++.+..++.++|||||||++|+|++|.+||.+.+.......
T Consensus       159 kl~DFG~a~~~~~~~~---------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~~~~  229 (361)
T 2yab_A          159 KLIDFGLAHEIEDGVE---------FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLAN  229 (361)
T ss_dssp             EECCCSSCEECCTTCC---------CCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHH
T ss_pred             EEEecCCceEcCCCCc---------cccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence            9999999987655322         1246799999999999999999999999999999999999999988654443333


Q ss_pred             hhhhccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhHHHHh
Q 005221          372 VCKKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKLIYQV  442 (708)
Q Consensus       372 i~~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~~f~~  442 (708)
                      +........+.. ...                     -...+.+||.+||..||.+|||+.|+|+||||..
T Consensus       230 i~~~~~~~~~~~-~~~---------------------~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  278 (361)
T 2yab_A          230 ITAVSYDFDEEF-FSQ---------------------TSELAKDFIRKLLVKETRKRLTIQEALRHPWITP  278 (361)
T ss_dssp             HHTTCCCCCHHH-HTT---------------------SCHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTSC
T ss_pred             HHhcCCCCCchh-ccC---------------------CCHHHHHHHHHHCCCChhHCcCHHHHhcCcCcCC
Confidence            333222111100 000                     1247899999999999999999999999999863


No 23 
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00  E-value=5.8e-45  Score=385.03  Aligned_cols=258  Identities=21%  Similarity=0.230  Sum_probs=212.1

Q ss_pred             CCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCCCCCCChHHHHHHHHcCCCCCccEEEEEeee
Q 005221          139 PMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNTLGGSHGVPRVHFKGRQ  218 (708)
Q Consensus       139 ~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~~~~~~~~Ei~il~~L~h~~~v~~~~~~~~~  218 (708)
                      .+|+++++||+|+||.||+|++..          +++.||||++..........+.+|+.+++.++|+|++..+.. +..
T Consensus        20 ~~y~~~~~lg~G~~g~V~~~~~~~----------~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~-~~~   88 (297)
T 3fxz_A           20 KKYTRFEKIGQGASGTVYTAMDVA----------TGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS-YLV   88 (297)
T ss_dssp             GTBCCCEEEEEETTEEEEEEEBTT----------TCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEE-EEE
T ss_pred             hceeeeeeeccCCCeEEEEEEECC----------CCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEE-EEE
Confidence            479999999999999999999877          789999999987654444567889999999999986666554 467


Q ss_pred             CCEEEEEEecC-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcEEEeccC
Q 005221          219 GDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLG  297 (708)
Q Consensus       219 ~~~~~lvme~~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~vkL~DFG  297 (708)
                      ++.+++||||+ |++|.+++...  .+++..++.++.||+.||.|||++||+||||||+|||++.++     .+||+|||
T Consensus        89 ~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~-----~~kl~Dfg  161 (297)
T 3fxz_A           89 GDELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDG-----SVKLTDFG  161 (297)
T ss_dssp             TTEEEEEEECCTTCBHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTC-----CEEECCCT
T ss_pred             CCEEEEEEECCCCCCHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEECCCC-----CEEEeeCC
Confidence            78899999999 99999999875  599999999999999999999999999999999999999887     59999999


Q ss_pred             ccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhhcc
Q 005221          298 LATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCKKKM  377 (708)
Q Consensus       298 la~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLltG~~Pf~~~~~~~~~~~i~~~~~  377 (708)
                      ++.........        ....+||+.|+|||++.+..++.++|||||||+||+|++|+.||.+.+.......+.....
T Consensus       162 ~~~~~~~~~~~--------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~  233 (297)
T 3fxz_A          162 FCAQITPEQSK--------RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGT  233 (297)
T ss_dssp             TCEECCSTTCC--------BCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCS
T ss_pred             CceecCCcccc--------cCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC
Confidence            99876544321        1245799999999999999999999999999999999999999987554333333322211


Q ss_pred             CCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhHHHHhccc
Q 005221          378 ATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKLIYQVGHK  445 (708)
Q Consensus       378 ~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~~f~~~~~  445 (708)
                      ...  ..+..+                     ...+.+||.+||..||++|||+.|+++||||+....
T Consensus       234 ~~~--~~~~~~---------------------~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~~~  278 (297)
T 3fxz_A          234 PEL--QNPEKL---------------------SAIFRDFLNRCLEMDVEKRGSAKELLQHQFLKIAKP  278 (297)
T ss_dssp             CCC--SCGGGS---------------------CHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGCCC
T ss_pred             CCC--CCcccc---------------------CHHHHHHHHHHccCChhHCcCHHHHhhChhhcccCc
Confidence            110  001111                     246889999999999999999999999999986543


No 24 
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00  E-value=2e-45  Score=398.69  Aligned_cols=256  Identities=18%  Similarity=0.181  Sum_probs=206.2

Q ss_pred             CCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecC---CCCCCCCChHHHHHHHHcCCCCCccEEEE
Q 005221          138 SPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRS---SKGCNYGPPYEWQVYNTLGGSHGVPRVHF  214 (708)
Q Consensus       138 ~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~---~~~~~~~~~~Ei~il~~L~h~~~v~~~~~  214 (708)
                      .++|++++.||+|+||.||+|++..          +++.||||++.+.   .......+.+|..+|..+.++++|+.++.
T Consensus        22 ~~~y~~~~~lG~G~fg~V~~~~~~~----------~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~   91 (353)
T 3txo_A           22 IDNFEFIRVLGKGSFGKVMLARVKE----------TGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFC   91 (353)
T ss_dssp             -CCEEEEEEEEEETTEEEEEEEETT----------TCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEE
T ss_pred             hhheEEEEEEeeCCCEEEEEEEEcC----------CCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEE
Confidence            3579999999999999999999987          7899999999864   12223346689999999854444666666


Q ss_pred             EeeeCCEEEEEEecC-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcEEE
Q 005221          215 KGRQGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFL  293 (708)
Q Consensus       215 ~~~~~~~~~lvme~~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~vkL  293 (708)
                      ++...+.+||||||+ ||+|.+++...+ .+++..++.++.||+.||+|||++|||||||||+||||+.++     .+||
T Consensus        92 ~~~~~~~~~lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NILl~~~g-----~ikL  165 (353)
T 3txo_A           92 CFQTPDRLFFVMEFVNGGDLMFHIQKSR-RFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEG-----HCKL  165 (353)
T ss_dssp             EEECSSEEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTS-----CEEE
T ss_pred             EEEeCCEEEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHEEECCCC-----CEEE
Confidence            678888999999999 899999998765 699999999999999999999999999999999999999887     5999


Q ss_pred             eccCccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCchhhhh
Q 005221          294 VDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVC  373 (708)
Q Consensus       294 ~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLltG~~Pf~~~~~~~~~~~i~  373 (708)
                      +|||+|+.......        ....++||+.|+|||++.+..++.++|||||||+||+|++|++||.+.+..+....+.
T Consensus       166 ~DFG~a~~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~  237 (353)
T 3txo_A          166 ADFGMCKEGICNGV--------TTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAIL  237 (353)
T ss_dssp             CCCTTCBCSCC-----------------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH
T ss_pred             ccccceeecccCCc--------cccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence            99999985433221        2235789999999999999999999999999999999999999998865544444443


Q ss_pred             hhccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcc------hHHHHhHHHHhc
Q 005221          374 KKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPIS------TEGAQKLIYQVG  443 (708)
Q Consensus       374 ~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~------~e~l~h~~f~~~  443 (708)
                      ......+     ..+                     ...+.+||.+||..||++||++      .|+++||||...
T Consensus       238 ~~~~~~p-----~~~---------------------~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~hp~f~~~  287 (353)
T 3txo_A          238 NDEVVYP-----TWL---------------------HEDATGILKSFMTKNPTMRLGSLTQGGEHAILRHPFFKEI  287 (353)
T ss_dssp             HCCCCCC-----TTS---------------------CHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHTSGGGTTC
T ss_pred             cCCCCCC-----CCC---------------------CHHHHHHHHHHhhhCHHHccCCcccCCHHHHhhCCcccCC
Confidence            3322111     111                     2478999999999999999999      899999999754


No 25 
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00  E-value=1.1e-44  Score=385.29  Aligned_cols=279  Identities=17%  Similarity=0.216  Sum_probs=216.0

Q ss_pred             CCCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCC--CCCCChHHHHHHHHcCCCCCccEEEE
Q 005221          137 GSPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKG--CNYGPPYEWQVYNTLGGSHGVPRVHF  214 (708)
Q Consensus       137 ~~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~--~~~~~~~Ei~il~~L~h~~~v~~~~~  214 (708)
                      -.++|+++++||+|+||+||+|++.           +++.||+|++......  ....+.+|+.+++.|+|+|++..+..
T Consensus        19 l~~~y~~~~~lG~G~~g~V~~~~~~-----------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~   87 (311)
T 3niz_A           19 LMEKYQKLEKVGEGTYGVVYKAKDS-----------QGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDV   87 (311)
T ss_dssp             SSCEEEEEEEEEECSSCEEEEEEET-----------TSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred             hHhhhHhhhhccCCCCeEEEEEEEC-----------CCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeE
Confidence            3468999999999999999999983           3789999998755322  12346789999999999886666555


Q ss_pred             EeeeCCEEEEEEecCCCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcEEEe
Q 005221          215 KGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLV  294 (708)
Q Consensus       215 ~~~~~~~~~lvme~~ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~vkL~  294 (708)
                      + ..++.++|||||+.++|.+.+......+++..++.++.||+.||.|||++||+||||||+|||++.++     .+||+
T Consensus        88 ~-~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIl~~~~~-----~~kl~  161 (311)
T 3niz_A           88 I-HSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDG-----ALKLA  161 (311)
T ss_dssp             E-CCSSCEEEEEECCSEEHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTC-----CEEEC
T ss_pred             E-ccCCEEEEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCchHhEEECCCC-----CEEEc
Confidence            4 67778999999998899999988777799999999999999999999999999999999999999887     59999


Q ss_pred             ccCccccccCCCCCccccccCCCceeeccccccchhhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCchhhhh
Q 005221          295 DLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLG-RTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVC  373 (708)
Q Consensus       295 DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~-~~~s~~~DIwSlGviL~eLltG~~Pf~~~~~~~~~~~i~  373 (708)
                      |||+++........        ....+||+.|+|||++.+ ..++.++|||||||++|+|++|++||.+....+....+.
T Consensus       162 Dfg~a~~~~~~~~~--------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~  233 (311)
T 3niz_A          162 DFGLARAFGIPVRS--------YTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIF  233 (311)
T ss_dssp             CCTTCEETTSCCC-----------CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHH
T ss_pred             cCcCceecCCCccc--------ccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Confidence            99999876543221        123468999999999987 568999999999999999999999999988777766666


Q ss_pred             hhccCCCCCCccCCCChHHHHHHHHHHcCCCCCcc-------cHHHHHHHHHhhhCCCCCCCCcchHHHHhHHHHhc
Q 005221          374 KKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEP-------NYAKYISLFDGIVGPNPDIRPISTEGAQKLIYQVG  443 (708)
Q Consensus       374 ~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP-------~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~~f~~~  443 (708)
                      .....+.+..+.......  .+.... ...+...+       -..++++||.+||..||++|||+.|+|+||||+..
T Consensus       234 ~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~  307 (311)
T 3niz_A          234 SILGTPNPREWPQVQELP--LWKQRT-FQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKDL  307 (311)
T ss_dssp             HHHCCCCTTTSGGGTTSH--HHHSCC-CCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTS
T ss_pred             HHHCCCChHHhhhhhccc--hhhhcc-cccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcCcccccC
Confidence            655555444333211100  000000 00001110       12478999999999999999999999999999754


No 26 
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00  E-value=7.6e-45  Score=391.61  Aligned_cols=254  Identities=21%  Similarity=0.233  Sum_probs=208.4

Q ss_pred             CCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecC---CCCCCCCChHHHHHHHHcCCCCCccEEEEE
Q 005221          139 PMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRS---SKGCNYGPPYEWQVYNTLGGSHGVPRVHFK  215 (708)
Q Consensus       139 ~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~---~~~~~~~~~~Ei~il~~L~h~~~v~~~~~~  215 (708)
                      ++|++++.||+|+||.||+|++..          +++.||||++++.   .......+.+|+.+|+.++|++++.. +.+
T Consensus         5 ~~y~~~~~lG~G~fg~V~~~~~~~----------~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l-~~~   73 (337)
T 1o6l_A            5 NDFDYLKLLGKGTFGKVILVREKA----------TGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL-KYA   73 (337)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETT----------TCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCE-EEE
T ss_pred             HHeEEEEEEecCCCeEEEEEEECC----------CCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcce-EEE
Confidence            479999999999999999999977          7899999999764   22223356789999999999886555 455


Q ss_pred             eeeCCEEEEEEecC-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcEEEe
Q 005221          216 GRQGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLV  294 (708)
Q Consensus       216 ~~~~~~~~lvme~~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~vkL~  294 (708)
                      +...+.+||||||+ ||+|.+++...+ .+++..++.++.||+.||+|||++|||||||||+||||+.++     .+||+
T Consensus        74 ~~~~~~~~lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g-----~vkL~  147 (337)
T 1o6l_A           74 FQTHDRLCFVMEYANGGELFFHLSRER-VFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDG-----HIKIT  147 (337)
T ss_dssp             EECSSEEEEEEECCTTCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTS-----CEEEC
T ss_pred             EEeCCEEEEEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeecCcCCHHHEEECCCC-----CEEEe
Confidence            57778999999999 889999987764 699999999999999999999999999999999999999887     59999


Q ss_pred             ccCccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhh
Q 005221          295 DLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCK  374 (708)
Q Consensus       295 DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLltG~~Pf~~~~~~~~~~~i~~  374 (708)
                      |||+++.......        .....+||+.|+|||++.+..++.++|||||||+||+|++|++||.+.+.......+..
T Consensus       148 DFG~a~~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~  219 (337)
T 1o6l_A          148 DFGLCKEGISDGA--------TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILM  219 (337)
T ss_dssp             CCTTCBCSCCTTC--------CBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH
T ss_pred             eccchhhcccCCC--------cccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHHHHHHHHc
Confidence            9999986433221        12357899999999999999999999999999999999999999987544333333332


Q ss_pred             hccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCC-----cchHHHHhHHHHhc
Q 005221          375 KKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRP-----ISTEGAQKLIYQVG  443 (708)
Q Consensus       375 ~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rp-----s~~e~l~h~~f~~~  443 (708)
                      ....     ++..+                     ...+.+||.+||..||++||     ++.|+++||||...
T Consensus       220 ~~~~-----~p~~~---------------------s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h~~f~~~  267 (337)
T 1o6l_A          220 EEIR-----FPRTL---------------------SPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSI  267 (337)
T ss_dssp             CCCC-----CCTTS---------------------CHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTTC
T ss_pred             CCCC-----CCCCC---------------------CHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcCCCcCCC
Confidence            2111     11111                     24789999999999999999     89999999999654


No 27 
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=3.8e-45  Score=391.08  Aligned_cols=261  Identities=15%  Similarity=0.169  Sum_probs=212.4

Q ss_pred             CCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCCCCCCChHHHHHHHHcCCCCCccEEEEEee
Q 005221          138 SPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNTLGGSHGVPRVHFKGR  217 (708)
Q Consensus       138 ~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~~~~~~~~Ei~il~~L~h~~~v~~~~~~~~  217 (708)
                      .++|++++.||+|+||.||+|++..          +++.||+|++..... ....+.+|+.+|+.++|+|++..+. ++.
T Consensus         4 ~~~y~~~~~lG~G~~g~Vy~~~~~~----------~~~~~a~K~~~~~~~-~~~~~~~E~~~l~~l~hpnIv~~~~-~~~   71 (321)
T 1tki_A            4 YEKYMIAEDLGRGEFGIVHRCVETS----------SKKTYMAKFVKVKGT-DQVLVKKEISILNIARHRNILHLHE-SFE   71 (321)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETT----------TTEEEEEEEECCCTH-HHHHHHHHHHHHHHSCCTTBCCEEE-EEE
T ss_pred             hhceEeeeEEecCCCeEEEEEEECC----------CCcEEEEEEEecCcc-cHHHHHHHHHHHHhCCCCCCCeEeE-EEe
Confidence            3589999999999999999999987          789999999875422 1234678999999999998666555 457


Q ss_pred             eCCEEEEEEecC-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcEEEecc
Q 005221          218 QGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDL  296 (708)
Q Consensus       218 ~~~~~~lvme~~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~vkL~DF  296 (708)
                      ..+.+++||||+ |++|.+++......+++..++.++.||+.||.|||++||+||||||+|||++.++   ...+||+||
T Consensus        72 ~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~givH~Dlkp~NIl~~~~~---~~~~kl~Df  148 (321)
T 1tki_A           72 SMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRR---SSTIKIIEF  148 (321)
T ss_dssp             ETTEEEEEECCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSS---CCCEEECCC
T ss_pred             cCCEEEEEEEeCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEccCC---CCCEEEEEC
Confidence            788999999999 8899999987766799999999999999999999999999999999999998632   136999999


Q ss_pred             CccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhhc
Q 005221          297 GLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCKKK  376 (708)
Q Consensus       297 Gla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLltG~~Pf~~~~~~~~~~~i~~~~  376 (708)
                      |+++.......         ....+||+.|+|||++.+..++.++|||||||+||+|++|.+||.+.+.......+....
T Consensus       149 g~a~~~~~~~~---------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~  219 (321)
T 1tki_A          149 GQARQLKPGDN---------FRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAE  219 (321)
T ss_dssp             TTCEECCTTCE---------EEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTC
T ss_pred             CCCeECCCCCc---------cccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHcCC
Confidence            99987654322         124679999999999999999999999999999999999999998865544433333332


Q ss_pred             cCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhHHHHhcc
Q 005221          377 MATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKLIYQVGH  444 (708)
Q Consensus       377 ~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~~f~~~~  444 (708)
                      .......+ ..+                     ...+.+||.+||..||.+|||+.|+|+||||....
T Consensus       220 ~~~~~~~~-~~~---------------------s~~~~~li~~~L~~dp~~Rpt~~e~l~hp~~~~~~  265 (321)
T 1tki_A          220 YTFDEEAF-KEI---------------------SIEAMDFVDRLLVKERKSRMTASEALQHPWLKQKI  265 (321)
T ss_dssp             CCCCHHHH-TTS---------------------CHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHSCG
T ss_pred             CCCChhhh-ccC---------------------CHHHHHHHHHHcCCChhHCcCHHHHhcChhhccCc
Confidence            22111000 001                     24789999999999999999999999999997543


No 28 
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00  E-value=7.9e-45  Score=389.43  Aligned_cols=276  Identities=17%  Similarity=0.173  Sum_probs=207.7

Q ss_pred             CCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCC--CCCCCChHHHHHHHHcCCCCCccEEEEEe
Q 005221          139 PMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSK--GCNYGPPYEWQVYNTLGGSHGVPRVHFKG  216 (708)
Q Consensus       139 ~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~--~~~~~~~~Ei~il~~L~h~~~v~~~~~~~  216 (708)
                      ++|+++++||+|+||.||+|++..          +++.||||++.....  .....+.+|+.+|+.|+|+|++..+. +.
T Consensus        34 ~~y~~~~~lg~G~~g~V~~~~~~~----------~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~-~~  102 (329)
T 3gbz_A           34 DRYRRITKLGEGTYGEVYKAIDTV----------TNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKS-VI  102 (329)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEETT----------TTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEE-EE
T ss_pred             hhEEEEEEEEecCCeEEEEEEECC----------CCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEE-EE
Confidence            479999999999999999999987          789999999876532  23456789999999999988665554 45


Q ss_pred             eeCCEEEEEEecCCCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcEEEecc
Q 005221          217 RQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDL  296 (708)
Q Consensus       217 ~~~~~~~lvme~~ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~vkL~DF  296 (708)
                      ..++.++|||||++++|.+++.... .+++..++.|+.||+.||.|||++|||||||||+||||+.++......+||+||
T Consensus       103 ~~~~~~~lv~e~~~~~L~~~~~~~~-~~~~~~~~~i~~ql~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Df  181 (329)
T 3gbz_A          103 HHNHRLHLIFEYAENDLKKYMDKNP-DVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDF  181 (329)
T ss_dssp             EETTEEEEEEECCSEEHHHHHHHCT-TCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEC-----CCEEEECCT
T ss_pred             ecCCEEEEEEecCCCCHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHHhCCEECCCCCHHHEEEecCCCCccceEEECcC
Confidence            7788999999999889999998765 599999999999999999999999999999999999997665445557999999


Q ss_pred             CccccccCCCCCccccccCCCceeeccccccchhhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhh
Q 005221          297 GLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGR-TGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCKK  375 (708)
Q Consensus       297 Gla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~-~~s~~~DIwSlGviL~eLltG~~Pf~~~~~~~~~~~i~~~  375 (708)
                      |+++........        ....+||+.|+|||++.+. .++.++|||||||+||+|++|++||.+....+....+...
T Consensus       182 g~a~~~~~~~~~--------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~  253 (329)
T 3gbz_A          182 GLARAFGIPIRQ--------FTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEV  253 (329)
T ss_dssp             THHHHHC-------------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHH
T ss_pred             CCccccCCcccc--------cCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHH
Confidence            999876543221        1235689999999999875 4899999999999999999999999987665555554443


Q ss_pred             ccCCCCCCccC-------------CCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhHHHHh
Q 005221          376 KMATSPDGLCC-------------FCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKLIYQV  442 (708)
Q Consensus       376 ~~~~~p~~l~~-------------~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~~f~~  442 (708)
                      ...+....+..             .....+...+...         -...+.+||.+||..||++|||+.|+|+||||+.
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~  324 (329)
T 3gbz_A          254 LGLPDDTTWPGVTALPDWKQSFPKFRGKTLKRVLGAL---------LDDEGLDLLTAMLEMDPVKRISAKNALEHPYFSH  324 (329)
T ss_dssp             HCCCCTTTSTTGGGSTTCCTTCCCCCCCCHHHHHGGG---------SCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSS
T ss_pred             hCCCchhhhhhhhhhhhhhhhhhhhccccHhhhcccc---------cCHHHHHHHHHHccCChhhCCCHHHHhCCcccCC
Confidence            33222222111             0111111111000         1257899999999999999999999999999875


Q ss_pred             c
Q 005221          443 G  443 (708)
Q Consensus       443 ~  443 (708)
                      .
T Consensus       325 ~  325 (329)
T 3gbz_A          325 N  325 (329)
T ss_dssp             S
T ss_pred             C
Confidence            4


No 29 
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00  E-value=8.1e-45  Score=391.22  Aligned_cols=254  Identities=24%  Similarity=0.236  Sum_probs=208.8

Q ss_pred             CCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecC---CCCCCCCChHHHHHHHHcCCCCCccEEEEE
Q 005221          139 PMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRS---SKGCNYGPPYEWQVYNTLGGSHGVPRVHFK  215 (708)
Q Consensus       139 ~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~---~~~~~~~~~~Ei~il~~L~h~~~v~~~~~~  215 (708)
                      ++|++++.||+|+||.||+|++..          +++.||||++.+.   .......+.+|+.+|+.++|+|++..+.. 
T Consensus         9 ~~Y~i~~~lG~G~~g~V~~a~~~~----------~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~-   77 (336)
T 3h4j_B            9 GPYIIRETLGEGSFGKVKLATHYK----------TQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDV-   77 (336)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETT----------TCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEE-
T ss_pred             CCEEEEEEEecCCCeEEEEEEECC----------CCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEE-
Confidence            479999999999999999999977          7899999998754   12223457889999999999886665554 


Q ss_pred             eeeCCEEEEEEecCCCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcEEEec
Q 005221          216 GRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVD  295 (708)
Q Consensus       216 ~~~~~~~~lvme~~ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~vkL~D  295 (708)
                      +...+.++|||||++|+|.+++...+ .+++..++.++.||+.||.|||++||+||||||+|||++.++     .+||+|
T Consensus        78 ~~~~~~~~lv~E~~~g~l~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~-----~~kl~D  151 (336)
T 3h4j_B           78 ITTPTDIVMVIEYAGGELFDYIVEKK-RMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLDDNL-----NVKIAD  151 (336)
T ss_dssp             EECSSEEEEEECCCCEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCSTTTEEECTTC-----CEEECC
T ss_pred             EEeCCEEEEEEECCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCchhhEEEcCCC-----CEEEEE
Confidence            56778899999999999999998765 699999999999999999999999999999999999999877     599999


Q ss_pred             cCccccccCCCCCccccccCCCceeeccccccchhhhcCCCC-CchhhHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhh
Q 005221          296 LGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTG-SRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCK  374 (708)
Q Consensus       296 FGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~-s~~~DIwSlGviL~eLltG~~Pf~~~~~~~~~~~i~~  374 (708)
                      ||++........         ....+||+.|+|||++.+..+ +.++|||||||+||+|++|++||.+.........+..
T Consensus       152 FG~s~~~~~~~~---------~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~  222 (336)
T 3h4j_B          152 FGLSNIMTDGNF---------LKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNS  222 (336)
T ss_dssp             SSCTBTTTTSBT---------TCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCBCCCCS
T ss_pred             eccceeccCCcc---------cccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHHHHHHc
Confidence            999987654321         224679999999999998876 7899999999999999999999987554433222211


Q ss_pred             hccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhHHHHhcc
Q 005221          375 KKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKLIYQVGH  444 (708)
Q Consensus       375 ~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~~f~~~~  444 (708)
                      ...     .++..++                     ..+.+||.+||..||.+|||+.|+++||||+...
T Consensus       223 ~~~-----~~p~~~s---------------------~~~~~li~~~L~~dP~~Rpt~~eil~hp~~~~~~  266 (336)
T 3h4j_B          223 CVY-----VMPDFLS---------------------PGAQSLIRRMIVADPMQRITIQEIRRDPWFNVNL  266 (336)
T ss_dssp             SCC-----CCCTTSC---------------------HHHHHHHHTTSCSSGGGSCCHHHHTTCHHHHTTC
T ss_pred             CCC-----CCcccCC---------------------HHHHHHHHHHcCCChhHCcCHHHHHhChhhccCC
Confidence            111     1111111                     4788999999999999999999999999998654


No 30 
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00  E-value=2.1e-44  Score=378.80  Aligned_cols=279  Identities=18%  Similarity=0.170  Sum_probs=209.6

Q ss_pred             CCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCCC--CCCChHHHHHHHHcCCCCCccEEEEEe
Q 005221          139 PMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGC--NYGPPYEWQVYNTLGGSHGVPRVHFKG  216 (708)
Q Consensus       139 ~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~~--~~~~~~Ei~il~~L~h~~~v~~~~~~~  216 (708)
                      ++|+++++||+|+||+||+|++..          +++.||||++.......  ...+.+|+.++++++|+|++..+. +.
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~----------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~-~~   70 (292)
T 3o0g_A            2 QKYEKLEKIGEGTYGTVFKAKNRE----------THEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHD-VL   70 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETT----------TCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEE-EE
T ss_pred             CCceeeeEecCCCCeEEEEEEECC----------CCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEe-EE
Confidence            579999999999999999999987          78999999998654322  234668999999999988665554 45


Q ss_pred             eeCCEEEEEEecCCCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcEEEecc
Q 005221          217 RQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDL  296 (708)
Q Consensus       217 ~~~~~~~lvme~~ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~vkL~DF  296 (708)
                      ..++.++|||||++++|.+.+......+++..++.++.||+.||.|||++||+||||||+|||++.++     .+||+||
T Consensus        71 ~~~~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~ivH~dikp~Nil~~~~~-----~~kl~Df  145 (292)
T 3o0g_A           71 HSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNG-----ELKLANF  145 (292)
T ss_dssp             EETTEEEEEEECCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTS-----CEEECCC
T ss_pred             EeCCEEEEEEecCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCC-----CEEEeec
Confidence            77889999999999999998887767899999999999999999999999999999999999999887     5999999


Q ss_pred             CccccccCCCCCccccccCCCceeeccccccchhhhcCCC-CCchhhHHHHHHHHHHHHhCCCCC-CCCCCCCchhhhhh
Q 005221          297 GLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRT-GSRRDDLESLAYTLIFLLRGRLPW-QGYQGENKGFLVCK  374 (708)
Q Consensus       297 Gla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~-~s~~~DIwSlGviL~eLltG~~Pf-~~~~~~~~~~~i~~  374 (708)
                      |+++........        ....+||+.|+|||++.+.. ++.++|||||||++|+|++|..|| .+.+..+....+..
T Consensus       146 g~~~~~~~~~~~--------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~  217 (292)
T 3o0g_A          146 GLARAFGIPVRC--------YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFR  217 (292)
T ss_dssp             TTCEECCSCCSC--------CCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHH
T ss_pred             ccceecCCcccc--------ccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHH
Confidence            999876543221        12356999999999998776 799999999999999999887774 44433333333333


Q ss_pred             hccCCCCCCccCCC--ChHHHHHHH-HHHcCCCCCcc-cHHHHHHHHHhhhCCCCCCCCcchHHHHhHHHHh
Q 005221          375 KKMATSPDGLCCFC--PAPFRQFVE-YVVNLKFDEEP-NYAKYISLFDGIVGPNPDIRPISTEGAQKLIYQV  442 (708)
Q Consensus       375 ~~~~~~p~~l~~~~--p~~~~~l~~-~~~~~~~~~rP-~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~~f~~  442 (708)
                      ....+....+....  +... .+.. ..........| -...+.+||.+||..||++|||+.|+|+||||+.
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~  288 (292)
T 3o0g_A          218 LLGTPTEEQWPSMTKLPDYK-PYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSD  288 (292)
T ss_dssp             HHCCCCTTTCTTGGGSTTCC-CCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTT
T ss_pred             HhCCCChhhhhhhccccccc-ccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcCccccc
Confidence            33322222211100  0000 0000 00000000001 1257899999999999999999999999999875


No 31 
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00  E-value=2.5e-44  Score=381.17  Aligned_cols=272  Identities=18%  Similarity=0.184  Sum_probs=212.1

Q ss_pred             CCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCC-----CCCCChHHHHHHHHcC---CCCCc
Q 005221          138 SPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKG-----CNYGPPYEWQVYNTLG---GSHGV  209 (708)
Q Consensus       138 ~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~-----~~~~~~~Ei~il~~L~---h~~~v  209 (708)
                      .++|+++++||+|+||.||+|++..          +++.||||++......     ......+|+.+++.|+   |+|++
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~----------~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv   77 (308)
T 3g33_A            8 TSRYEPVAEIGVGAYGTVYKARDPH----------SGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVV   77 (308)
T ss_dssp             --CCEEEEEECCSSSCCEEEEECTT----------TCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBC
T ss_pred             ccceEEEEEEecCCCeEEEEEEECC----------CCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeE
Confidence            4589999999999999999999877          7899999998754321     1224567898888776   88877


Q ss_pred             cEEEEEeeeCC----EEEEEEecCCCCHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCC
Q 005221          210 PRVHFKGRQGD----YYVMVMDMLGPSLWDVWNNNS-HTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPG  284 (708)
Q Consensus       210 ~~~~~~~~~~~----~~~lvme~~ggsL~~~l~~~~-~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g  284 (708)
                      ..+..+.....    .+++|||+++++|.+++.... ..+++..++.++.||+.||+|||++||+||||||+|||++.++
T Consensus        78 ~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~  157 (308)
T 3g33_A           78 RLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGG  157 (308)
T ss_dssp             CEEEEEEECCSSSEEEEEEEEECCCCBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCTTTEEECTTS
T ss_pred             EeeeeeeccCCCCceeEEEEehhhhcCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCC
Confidence            77776654332    789999999999999998764 3499999999999999999999999999999999999998877


Q ss_pred             CCCCCcEEEeccCccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q 005221          285 TPDEKKLFLVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQ  364 (708)
Q Consensus       285 ~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLltG~~Pf~~~~  364 (708)
                           .+||+|||+++.......         ....+||+.|+|||++.+..++.++|||||||++|+|++|++||.+.+
T Consensus       158 -----~~kl~Dfg~a~~~~~~~~---------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~  223 (308)
T 3g33_A          158 -----TVKLADFGLARIYSYQMA---------LTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNS  223 (308)
T ss_dssp             -----CEEECSCSCTTTSTTCCC---------SGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSS
T ss_pred             -----CEEEeeCccccccCCCcc---------cCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCC
Confidence                 599999999987654322         124669999999999999999999999999999999999999999877


Q ss_pred             CCCchhhhhhhccCCCCCCccCCCC-----------hHHHHHHHHHHcCCCCCccc-HHHHHHHHHhhhCCCCCCCCcch
Q 005221          365 GENKGFLVCKKKMATSPDGLCCFCP-----------APFRQFVEYVVNLKFDEEPN-YAKYISLFDGIVGPNPDIRPIST  432 (708)
Q Consensus       365 ~~~~~~~i~~~~~~~~p~~l~~~~p-----------~~~~~l~~~~~~~~~~~rP~-~~~l~~LL~~mL~~dP~~Rps~~  432 (708)
                      ..+....+......+....++....           ..+..+           .|. ...+.+||.+||..||++|||+.
T Consensus       224 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~li~~~L~~dP~~R~t~~  292 (308)
T 3g33_A          224 EADQLGKIFDLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSV-----------VPEMEESGAQLLLEMLTFNPHKRISAF  292 (308)
T ss_dssp             HHHHHHHHHHHHCCCCTTTSCSSCSSCGGGSCCCCCCCHHHH-----------SCSCCHHHHHHHHHHTCSSTTTSCCHH
T ss_pred             HHHHHHHHHHHhCCCChhhccchhhccccccCCCCCCcHHHh-----------CccccHHHHHHHHHHhcCCCccCCCHH
Confidence            6655555554443333333322111           111100           011 25789999999999999999999


Q ss_pred             HHHHhHHHHhcc
Q 005221          433 EGAQKLIYQVGH  444 (708)
Q Consensus       433 e~l~h~~f~~~~  444 (708)
                      |+|+||||+...
T Consensus       293 e~l~h~~~~~~~  304 (308)
T 3g33_A          293 RALQHSYLHKDE  304 (308)
T ss_dssp             HHHTSTTC----
T ss_pred             HHhcCccccCCC
Confidence            999999987643


No 32 
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00  E-value=3.7e-45  Score=410.89  Aligned_cols=279  Identities=18%  Similarity=0.161  Sum_probs=214.5

Q ss_pred             CCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCC--CCCCCCChHHHHHHHHcCCCCCccEEEEE
Q 005221          138 SPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSS--KGCNYGPPYEWQVYNTLGGSHGVPRVHFK  215 (708)
Q Consensus       138 ~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~--~~~~~~~~~Ei~il~~L~h~~~v~~~~~~  215 (708)
                      .++|+++++||+|+||.||+|++..          +++.||||++.+..  ......+.+|+.+|+.++|+|+|..+..+
T Consensus        61 ~~~y~~~~~lG~G~~g~V~~a~~~~----------~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~  130 (464)
T 3ttj_A           61 LKRYQNLKPIGSGAQGIVCAAYDAV----------LDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVF  130 (464)
T ss_dssp             ETTEEEEEEEEECSSCEEEEEEETT----------TTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEE
T ss_pred             cCCeEEEEEeecCCCeEEEEEEECC----------CCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEE
Confidence            3689999999999999999999987          78999999997642  12233567899999999999988887776


Q ss_pred             eee-----CCEEEEEEecCCCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCc
Q 005221          216 GRQ-----GDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKK  290 (708)
Q Consensus       216 ~~~-----~~~~~lvme~~ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~  290 (708)
                      ...     ...+||||||++++|.+.+..   .+++..++.++.||+.||+|||++|||||||||+||||+.++     .
T Consensus       131 ~~~~~~~~~~~~~lv~E~~~~~l~~~~~~---~l~~~~~~~~~~qil~aL~~lH~~~iiHrDlkp~NIll~~~~-----~  202 (464)
T 3ttj_A          131 TPQKTLEEFQDVYLVMELMDANLCQVIQM---ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC-----T  202 (464)
T ss_dssp             CSCCSTTTCCEEEEEEECCSEEHHHHHTS---CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTS-----C
T ss_pred             ccCCccccCCeEEEEEeCCCCCHHHHHhh---cCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChHhEEEeCCC-----C
Confidence            433     257899999998889888854   499999999999999999999999999999999999999887     5


Q ss_pred             EEEeccCccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCchh
Q 005221          291 LFLVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGF  370 (708)
Q Consensus       291 vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLltG~~Pf~~~~~~~~~~  370 (708)
                      +||+|||+|+.......         ....+||+.|+|||++.+..|+.++|||||||+||+|++|++||.+.+..+...
T Consensus       203 ~kl~DFG~a~~~~~~~~---------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~  273 (464)
T 3ttj_A          203 LKILDFGLARTAGTSFM---------MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWN  273 (464)
T ss_dssp             EEECCCCCC-----CCC---------C----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH
T ss_pred             EEEEEEEeeeecCCCcc---------cCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence            99999999987654321         234679999999999999999999999999999999999999999877666666


Q ss_pred             hhhhhccCCCCCCccCCCChHHHHHHHHHHcCCCCCc----c-------------cHHHHHHHHHhhhCCCCCCCCcchH
Q 005221          371 LVCKKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEE----P-------------NYAKYISLFDGIVGPNPDIRPISTE  433 (708)
Q Consensus       371 ~i~~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~r----P-------------~~~~l~~LL~~mL~~dP~~Rps~~e  433 (708)
                      .+......+.++.+.. ....+..++..........-    |             ....+++||.+||..||++|||+.|
T Consensus       274 ~i~~~lg~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e  352 (464)
T 3ttj_A          274 KVIEQLGTPCPEFMKK-LQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDD  352 (464)
T ss_dssp             HHHHHHCSCCHHHHTT-SCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHH
T ss_pred             HHHHhcCCCCHHHHHH-cchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHH
Confidence            6665554443332222 22333333221110000000    0             0357899999999999999999999


Q ss_pred             HHHhHHHHhcc
Q 005221          434 GAQKLIYQVGH  444 (708)
Q Consensus       434 ~l~h~~f~~~~  444 (708)
                      +|+||||+...
T Consensus       353 ~L~Hp~~~~~~  363 (464)
T 3ttj_A          353 ALQHPYINVWY  363 (464)
T ss_dssp             HHTSTTTGGGC
T ss_pred             HhcChhhhhcc
Confidence            99999998543


No 33 
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00  E-value=2.7e-44  Score=384.49  Aligned_cols=280  Identities=19%  Similarity=0.180  Sum_probs=214.4

Q ss_pred             CCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCC-CCCCCChHHHHHHHHcCCCCCccEEEEEee
Q 005221          139 PMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSK-GCNYGPPYEWQVYNTLGGSHGVPRVHFKGR  217 (708)
Q Consensus       139 ~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~-~~~~~~~~Ei~il~~L~h~~~v~~~~~~~~  217 (708)
                      ++|+++++||+|+||.||+|++..          +++.||||++..... .....+.+|+.+|+.|+|+|++..+.. +.
T Consensus         2 ~~y~~~~~lG~G~~g~V~~~~~~~----------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~-~~   70 (324)
T 3mtl_A            2 ETYIKLDKLGEGTYATVYKGKSKL----------TDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDI-IH   70 (324)
T ss_dssp             CSEEEEEEEEECSSEEEEEEEETT----------TCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEE-EE
T ss_pred             CceEEEEEEcCCCCEEEEEEEECC----------CCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeE-Ee
Confidence            579999999999999999999977          789999999875532 233456789999999999886665554 56


Q ss_pred             eCCEEEEEEecCCCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcEEEeccC
Q 005221          218 QGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLG  297 (708)
Q Consensus       218 ~~~~~~lvme~~ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~vkL~DFG  297 (708)
                      .++.++|||||++++|.+++...+..+++..++.++.||+.||.|||++||+||||||+|||++.++     .+||+|||
T Consensus        71 ~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~-----~~kl~Dfg  145 (324)
T 3mtl_A           71 TEKSLTLVFEYLDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINERG-----ELKLADFG  145 (324)
T ss_dssp             CSSCEEEEEECCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEEESSCCGGGEEECTTC-----CEEECSSS
T ss_pred             eCCEEEEEecccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCcCHHHEEECCCC-----CEEEccCc
Confidence            7788999999999999999988877899999999999999999999999999999999999999887     59999999


Q ss_pred             ccccccCCCCCccccccCCCceeeccccccchhhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhhc
Q 005221          298 LATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLG-RTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCKKK  376 (708)
Q Consensus       298 la~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~-~~~s~~~DIwSlGviL~eLltG~~Pf~~~~~~~~~~~i~~~~  376 (708)
                      +++........        ....+||+.|+|||++.+ ..++.++|||||||+||+|++|++||.+.+..+....+....
T Consensus       146 ~a~~~~~~~~~--------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~  217 (324)
T 3mtl_A          146 LARAKSIPTKT--------YDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRIL  217 (324)
T ss_dssp             EEECC--------------------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHH
T ss_pred             ccccccCCccc--------cccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHh
Confidence            99865433211        123568999999999987 568999999999999999999999999877766666666655


Q ss_pred             cCCCCCCccCCCChHHHHHHHHHHcCCCCC------cc-cHHHHHHHHHhhhCCCCCCCCcchHHHHhHHHHhccc
Q 005221          377 MATSPDGLCCFCPAPFRQFVEYVVNLKFDE------EP-NYAKYISLFDGIVGPNPDIRPISTEGAQKLIYQVGHK  445 (708)
Q Consensus       377 ~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~------rP-~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~~f~~~~~  445 (708)
                      ..+.+..++.......  +.. ........      .+ -...+.+||.+||..||++|||+.|+|+||||.....
T Consensus       218 ~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~  290 (324)
T 3mtl_A          218 GTPTEETWPGILSNEE--FKT-YNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLSLGE  290 (324)
T ss_dssp             CCCCTTTSTTGGGCHH--HHH-TCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGGCS
T ss_pred             CCCChHhchhhhcchh--hcc-cccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcChhhhhccc
Confidence            5555444433221110  000 00000000      00 1257899999999999999999999999999986543


No 34 
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00  E-value=1.7e-44  Score=392.62  Aligned_cols=260  Identities=21%  Similarity=0.188  Sum_probs=210.7

Q ss_pred             CCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCC--CCCCChHHHHHHHHcCCCCCccEEEEEe
Q 005221          139 PMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKG--CNYGPPYEWQVYNTLGGSHGVPRVHFKG  216 (708)
Q Consensus       139 ~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~--~~~~~~~Ei~il~~L~h~~~v~~~~~~~  216 (708)
                      ++|++.+.||+|+||.||+|++..          +++.||+|++......  ....+.+|+.+|+.|+|+|+|..+. ++
T Consensus        29 ~~y~~~~~lG~G~~g~V~~~~~~~----------~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~-~~   97 (362)
T 2bdw_A           29 DNYDVKEELGKGAFSVVRRCVHKT----------TGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHD-SI   97 (362)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETT----------TCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEE-EE
T ss_pred             cCeEEeeEEecCCCeEEEEEEECC----------CCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEE-EE
Confidence            469999999999999999999977          7899999999765321  1234678999999999988666555 45


Q ss_pred             eeCCEEEEEEecC-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcEEEec
Q 005221          217 RQGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVD  295 (708)
Q Consensus       217 ~~~~~~~lvme~~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~vkL~D  295 (708)
                      ...+.+++||||+ |++|.+.+.... .+++..++.++.||+.||.|||++||+||||||+|||++.++  ....+||+|
T Consensus        98 ~~~~~~~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~--~~~~~kl~D  174 (362)
T 2bdw_A           98 QEESFHYLVFDLVTGGELFEDIVARE-FYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKA--KGAAVKLAD  174 (362)
T ss_dssp             ECSSEEEEEECCCCSCBHHHHHTTCS-CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEESCSS--TTCCEEECC
T ss_pred             EeCCEEEEEEecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCC--CCCCEEEee
Confidence            7788899999999 889999987764 699999999999999999999999999999999999998765  233699999


Q ss_pred             cCccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhh
Q 005221          296 LGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCKK  375 (708)
Q Consensus       296 FGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLltG~~Pf~~~~~~~~~~~i~~~  375 (708)
                      ||++........         ....+||+.|+|||++.+..++.++|||||||++|+|++|++||.+.+.......+...
T Consensus       175 fG~a~~~~~~~~---------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~  245 (362)
T 2bdw_A          175 FGLAIEVNDSEA---------WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAG  245 (362)
T ss_dssp             CTTCBCCTTCCS---------CCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHT
T ss_pred             cCcceEecCCcc---------cccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhC
Confidence            999987654322         12366999999999999999999999999999999999999999876543333333333


Q ss_pred             ccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhHHHHhc
Q 005221          376 KMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKLIYQVG  443 (708)
Q Consensus       376 ~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~~f~~~  443 (708)
                      ........+ ..+                     ...+.+||.+||..||++||++.|+|+||||...
T Consensus       246 ~~~~~~~~~-~~~---------------------~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~  291 (362)
T 2bdw_A          246 AYDYPSPEW-DTV---------------------TPEAKSLIDSMLTVNPKKRITADQALKVPWICNR  291 (362)
T ss_dssp             CCCCCTTGG-GGS---------------------CHHHHHHHHHHSCSSGGGSCCHHHHTTSHHHHTH
T ss_pred             CCCCCcccc-cCC---------------------CHHHHHHHHHHcCCChhhCcCHHHHhcCcccCCC
Confidence            222211111 011                     2478999999999999999999999999999753


No 35 
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00  E-value=9.6e-45  Score=392.52  Aligned_cols=259  Identities=19%  Similarity=0.191  Sum_probs=193.3

Q ss_pred             CCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCCCCCCChHHHHHHHHcCCCCCccEEEEEeee
Q 005221          139 PMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNTLGGSHGVPRVHFKGRQ  218 (708)
Q Consensus       139 ~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~~~~~~~~Ei~il~~L~h~~~v~~~~~~~~~  218 (708)
                      ++|++.+.||+|+||.||+|++..          +++.||||++.....  ...+.+|+.+|++|+|+|++..+.. +..
T Consensus        53 ~~y~~~~~lG~G~~g~Vy~~~~~~----------~~~~vavK~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~-~~~  119 (349)
T 2w4o_A           53 DFFEVESELGRGATSIVYRCKQKG----------TQKPYALKVLKKTVD--KKIVRTEIGVLLRLSHPNIIKLKEI-FET  119 (349)
T ss_dssp             GTEEEEEEEEECSSEEEEEEEETT----------TCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEE-EEC
T ss_pred             CcEEEeeEEeeCCCEEEEEEEECC----------CCcEEEEEEeccchh--HHHHHHHHHHHHhCCCCCCcceeee-Eec
Confidence            579999999999999999999977          788999999986532  3457789999999999886665554 467


Q ss_pred             CCEEEEEEecC-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcEEEeccC
Q 005221          219 GDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLG  297 (708)
Q Consensus       219 ~~~~~lvme~~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~vkL~DFG  297 (708)
                      .+.+++||||+ +++|.+++...+ .+++..++.++.||+.||.|||++||+||||||+|||++..+  ....+||+|||
T Consensus       120 ~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIll~~~~--~~~~~kl~Dfg  196 (349)
T 2w4o_A          120 PTEISLVLELVTGGELFDRIVEKG-YYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPA--PDAPLKIADFG  196 (349)
T ss_dssp             SSEEEEEECCCCSCBHHHHHTTCS-SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESSSS--TTCCEEECCCC
T ss_pred             CCeEEEEEEeCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCcccEEEecCC--CCCCEEEccCc
Confidence            78899999999 899999997764 699999999999999999999999999999999999998622  22369999999


Q ss_pred             ccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCchh-hhhhhc
Q 005221          298 LATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGF-LVCKKK  376 (708)
Q Consensus       298 la~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLltG~~Pf~~~~~~~~~~-~i~~~~  376 (708)
                      +++.......         ....+||+.|+|||++.+..++.++|||||||+||+|++|+.||.+........ .+....
T Consensus       197 ~a~~~~~~~~---------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~~~  267 (349)
T 2w4o_A          197 LSKIVEHQVL---------MKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCE  267 (349)
T ss_dssp             -------------------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHTTC
T ss_pred             cccccCcccc---------cccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHhCC
Confidence            9987544321         124669999999999999999999999999999999999999998754433211 122111


Q ss_pred             cCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhHHHHhcc
Q 005221          377 MATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKLIYQVGH  444 (708)
Q Consensus       377 ~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~~f~~~~  444 (708)
                      ... +..+...+                     ...+.+||.+||..||++|||+.|+|+||||....
T Consensus       268 ~~~-~~~~~~~~---------------------~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~~  313 (349)
T 2w4o_A          268 YYF-ISPWWDEV---------------------SLNAKDLVRKLIVLDPKKRLTTFQALQHPWVTGKA  313 (349)
T ss_dssp             CCC-CTTTTTTS---------------------CHHHHHHHHTTSCSSGGGSCCHHHHHHSTTTTSTT
T ss_pred             Ccc-CCchhhhC---------------------CHHHHHHHHHHccCChhhCcCHHHHhcCcccCCCc
Confidence            111 11100111                     24788999999999999999999999999987543


No 36 
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00  E-value=4.6e-44  Score=393.51  Aligned_cols=263  Identities=16%  Similarity=0.170  Sum_probs=205.3

Q ss_pred             CCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCC---CCCCCCChHHHHHHHHc-CCCCCccEEE
Q 005221          138 SPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSS---KGCNYGPPYEWQVYNTL-GGSHGVPRVH  213 (708)
Q Consensus       138 ~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~---~~~~~~~~~Ei~il~~L-~h~~~v~~~~  213 (708)
                      .++|++++.||+|+||.||+|++..          +++.||+|++++..   ......+.+|..+|.++ +|+| |+.++
T Consensus        51 ~~~y~~~~~LG~G~fG~V~~~~~~~----------~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~-Iv~l~  119 (396)
T 4dc2_A           51 LQDFDLLRVIGRGSYAKVLLVRLKK----------TDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPF-LVGLH  119 (396)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETT----------TTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTT-BCCEE
T ss_pred             hhHcEEEEEEeeCCCeEEEEEEECC----------CCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCC-cCeeE
Confidence            3479999999999999999999987          78999999998652   22233467899999988 5655 55566


Q ss_pred             EEeeeCCEEEEEEecC-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcEE
Q 005221          214 FKGRQGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLF  292 (708)
Q Consensus       214 ~~~~~~~~~~lvme~~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~vk  292 (708)
                      .++...+.+||||||+ ||+|.+++...+ .+++..++.++.||+.||.|||++|||||||||+||||+.++     .+|
T Consensus       120 ~~~~~~~~~~lV~E~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g-----~ik  193 (396)
T 4dc2_A          120 SCFQTESRLFFVIEYVNGGDLMFHMQRQR-KLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEG-----HIK  193 (396)
T ss_dssp             EEEECSSEEEEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTS-----CEE
T ss_pred             EEEEECCEEEEEEEcCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEECCCC-----CEE
Confidence            6667888999999999 889999998765 699999999999999999999999999999999999999887     599


Q ss_pred             EeccCccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCchhhh
Q 005221          293 LVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLV  372 (708)
Q Consensus       293 L~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLltG~~Pf~~~~~~~~~~~i  372 (708)
                      |+|||+|+.......        ....++||+.|+|||++.+..++.++|||||||+||||++|++||......+.... 
T Consensus       194 L~DFGla~~~~~~~~--------~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~-  264 (396)
T 4dc2_A          194 LTDYGMCKEGLRPGD--------TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQ-  264 (396)
T ss_dssp             ECCCTTCBCCCCTTC--------CBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC-------
T ss_pred             EeecceeeecccCCC--------ccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccch-
Confidence            999999986332211        12357899999999999999999999999999999999999999975432111000 


Q ss_pred             hhhccCCCCCCccCCCChHHHHHHHHHHcCCCCCcc-cHHHHHHHHHhhhCCCCCCCCcc------hHHHHhHHHHhc
Q 005221          373 CKKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEP-NYAKYISLFDGIVGPNPDIRPIS------TEGAQKLIYQVG  443 (708)
Q Consensus       373 ~~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP-~~~~l~~LL~~mL~~dP~~Rps~------~e~l~h~~f~~~  443 (708)
                                       .....+...+....+.-.+ -...+.+||.+||..||.+||++      .|+++||||...
T Consensus       265 -----------------~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~Hpff~~i  325 (396)
T 4dc2_A          265 -----------------NTEDYLFQVILEKQIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNV  325 (396)
T ss_dssp             -----------------CCHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHSTTTTTC
T ss_pred             -----------------hhHHHHHHHHhccccCCCCcCCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcCccccCC
Confidence                             0000111112211111111 12578999999999999999996      799999999754


No 37 
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00  E-value=2.7e-44  Score=377.46  Aligned_cols=277  Identities=16%  Similarity=0.187  Sum_probs=206.8

Q ss_pred             CCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCC--CCCCChHHHHHHHHcCCCCCccEEEEEe
Q 005221          139 PMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKG--CNYGPPYEWQVYNTLGGSHGVPRVHFKG  216 (708)
Q Consensus       139 ~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~--~~~~~~~Ei~il~~L~h~~~v~~~~~~~  216 (708)
                      ++|++++.||+|+||.||+|++ .          +++.||+|++......  ....+.+|+.+++.|+|+|++..+.. .
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~-~----------~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~-~   69 (288)
T 1ob3_A            2 EKYHGLEKIGEGTYGVVYKAQN-N----------YGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV-I   69 (288)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEE-T----------TSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEE-E
T ss_pred             ccchhhhhcccCCCEEEEEEEc-C----------CCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeE-E
Confidence            5799999999999999999998 4          5789999998755322  22346789999999999886665555 4


Q ss_pred             eeCCEEEEEEecCCCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcEEEecc
Q 005221          217 RQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDL  296 (708)
Q Consensus       217 ~~~~~~~lvme~~ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~vkL~DF  296 (708)
                      ...+.+++|||++.++|.+++......+++..++.++.||+.||.|||++||+||||||+|||++.++     .+||+||
T Consensus        70 ~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~-----~~kl~Df  144 (288)
T 1ob3_A           70 HTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREG-----ELKIADF  144 (288)
T ss_dssp             ECSSCEEEEEECCSEEHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTS-----CEEECCT
T ss_pred             ccCCeEEEEEEecCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCC-----CEEEeEC
Confidence            66778999999998899999988766899999999999999999999999999999999999999877     5999999


Q ss_pred             CccccccCCCCCccccccCCCceeeccccccchhhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhh
Q 005221          297 GLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGR-TGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCKK  375 (708)
Q Consensus       297 Gla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~-~~s~~~DIwSlGviL~eLltG~~Pf~~~~~~~~~~~i~~~  375 (708)
                      |+++........        ....+||+.|+|||++.+. .++.++|||||||++|+|++|++||.+.+..+....+...
T Consensus       145 g~~~~~~~~~~~--------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~  216 (288)
T 1ob3_A          145 GLARAFGIPVRK--------YTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRI  216 (288)
T ss_dssp             THHHHHCC-----------------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHH
T ss_pred             ccccccCccccc--------cccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence            999876533211        1234689999999999764 5899999999999999999999999986655444444333


Q ss_pred             ccCCCCCCccCC--CC---hHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhHHHHh
Q 005221          376 KMATSPDGLCCF--CP---APFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKLIYQV  442 (708)
Q Consensus       376 ~~~~~p~~l~~~--~p---~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~~f~~  442 (708)
                      ........++..  .+   ..+......-+......  -...+.+||.+||..||++|||+.|+|+||||+.
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~  286 (288)
T 1ob3_A          217 LGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKG--LDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE  286 (288)
T ss_dssp             HCCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGTCCS--CCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGGC
T ss_pred             HCCCChhhchhhhcccccccccccccCccHHHHhhh--cCHHHHHHHHHHcCCCcccCCCHHHHhcCcchhh
Confidence            222222111100  00   00000000000000000  1257899999999999999999999999999864


No 38 
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00  E-value=6.9e-45  Score=407.69  Aligned_cols=292  Identities=16%  Similarity=0.149  Sum_probs=198.3

Q ss_pred             CCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCC--CCCCChHHHHHHHHcCCCCCccEEEEE
Q 005221          138 SPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKG--CNYGPPYEWQVYNTLGGSHGVPRVHFK  215 (708)
Q Consensus       138 ~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~--~~~~~~~Ei~il~~L~h~~~v~~~~~~  215 (708)
                      .++|++++.||+|+||+||+|++..          +++.||||++......  ....+.+|+.+|+.|+|+|+|..+..+
T Consensus        52 ~~~y~~~~~lG~G~~g~V~~~~~~~----------~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~  121 (458)
T 3rp9_A           52 PDRYEIRHLIGTGSYGHVCEAYDKL----------EKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIV  121 (458)
T ss_dssp             CTTEEECCC-------CEEEEEECC------------CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEC
T ss_pred             CCCeEEeeEeeecCCeEEEEEEECC----------CCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEE
Confidence            3589999999999999999999987          7899999998754221  123467899999999999988777766


Q ss_pred             ee----eCCEEEEEEecCCCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcE
Q 005221          216 GR----QGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKL  291 (708)
Q Consensus       216 ~~----~~~~~~lvme~~ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~v  291 (708)
                      ..    ....+|||||+++++|.+++.... .+++..++.|+.||+.||+|||++|||||||||+||||+.++     .+
T Consensus       122 ~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~-~l~~~~~~~~~~qi~~aL~~LH~~~iiHrDlKp~NILl~~~~-----~~  195 (458)
T 3rp9_A          122 IPKDVEKFDELYVVLEIADSDFKKLFRTPV-YLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDC-----SV  195 (458)
T ss_dssp             CCSCTTTCCCEEEEECCCSEEHHHHHHSSC-CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTC-----CE
T ss_pred             ecCCcccCceEEEEEeccccchhhhcccCC-CCCHHHHHHHHHHHHHHHHHHHhCCcCCCCCChhhEEECCCC-----CE
Confidence            42    236799999999999999997754 699999999999999999999999999999999999999887     59


Q ss_pred             EEeccCccccccCCCCCccc-------------------cccCCCceeeccccccchhhh-cCCCCCchhhHHHHHHHHH
Q 005221          292 FLVDLGLATKWRDSTTGMHV-------------------EYDQRPDVFRGTVRYASVHAH-LGRTGSRRDDLESLAYTLI  351 (708)
Q Consensus       292 kL~DFGla~~~~~~~~~~~~-------------------~~~~~~~~~~GT~~Y~APE~~-~~~~~s~~~DIwSlGviL~  351 (708)
                      ||+|||+|+...........                   .........+||+.|+|||++ .+..|+.++||||||||||
T Consensus       196 kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~  275 (458)
T 3rp9_A          196 KVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFA  275 (458)
T ss_dssp             EECCCTTCBCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHH
T ss_pred             eecccccchhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHH
Confidence            99999999976543221100                   001123456899999999986 4667999999999999999


Q ss_pred             HHHh-----------CCCCCCCCCCC--------------------CchhhhhhhccCCCCCCccCCCChHHHHHHHHHH
Q 005221          352 FLLR-----------GRLPWQGYQGE--------------------NKGFLVCKKKMATSPDGLCCFCPAPFRQFVEYVV  400 (708)
Q Consensus       352 eLlt-----------G~~Pf~~~~~~--------------------~~~~~i~~~~~~~~p~~l~~~~p~~~~~l~~~~~  400 (708)
                      ||++           |+++|.+....                    +....+......+..+.+..........++....
T Consensus       276 elltg~~~~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~  355 (458)
T 3rp9_A          276 ELLNMIKENVAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFP  355 (458)
T ss_dssp             HHHTTSTTTCSSGGGCCCSCC--------------------CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTTSC
T ss_pred             HHHHhccccccccccccccCCCCccccccccccccccccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHhcC
Confidence            9999           67777664321                    1111121111111111111111111111211111


Q ss_pred             cCCCC---C-cc-cHHHHHHHHHhhhCCCCCCCCcchHHHHhHHHHhccc
Q 005221          401 NLKFD---E-EP-NYAKYISLFDGIVGPNPDIRPISTEGAQKLIYQVGHK  445 (708)
Q Consensus       401 ~~~~~---~-rP-~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~~f~~~~~  445 (708)
                      .....   . -| ....+++||.+||..||++|||+.|+|+||||.....
T Consensus       356 ~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~t~~e~L~Hp~f~~~~~  405 (458)
T 3rp9_A          356 KREGTDLAERFPASSADAIHLLKRMLVFNPNKRITINECLAHPFFKEVRI  405 (458)
T ss_dssp             CCCCCCGGGGSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTCC
T ss_pred             CCCCCCHHHHCCCCCHHHHHHHHHHhccCccccCCHHHHhcCHhhhhcCC
Confidence            10000   0 01 1357999999999999999999999999999986543


No 39 
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00  E-value=1.2e-44  Score=404.11  Aligned_cols=261  Identities=19%  Similarity=0.144  Sum_probs=211.0

Q ss_pred             CCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCC--CCCCCChHHHHHHHHcCCCCCccEEEEEe
Q 005221          139 PMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSK--GCNYGPPYEWQVYNTLGGSHGVPRVHFKG  216 (708)
Q Consensus       139 ~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~--~~~~~~~~Ei~il~~L~h~~~v~~~~~~~  216 (708)
                      ++|++++.||+|+||.||+|++..          +++.||+|++.....  .....+.+|+.+|+.|+|+|+|..+. ++
T Consensus        11 ~~Y~i~~~LG~G~fg~V~~~~~~~----------~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~-~~   79 (444)
T 3soa_A           11 EEYQLFEELGKGAFSVVRRCVKVL----------AGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHD-SI   79 (444)
T ss_dssp             HHEEEEEEEEEC--CEEEEEEETT----------TTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEE-EE
T ss_pred             CCeEEEEEeccCCCeEEEEEEECC----------CCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEE-EE
Confidence            469999999999999999999987          789999999876432  11234678999999999988666555 55


Q ss_pred             eeCCEEEEEEecC-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcEEEec
Q 005221          217 RQGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVD  295 (708)
Q Consensus       217 ~~~~~~~lvme~~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~vkL~D  295 (708)
                      .+++.+++||||+ ||+|.+.+...+ .+++..++.++.||+.||.|||++||+||||||+|||++...  ....+||+|
T Consensus        80 ~~~~~~~lv~E~~~gg~L~~~i~~~~-~~~e~~~~~i~~qil~aL~~lH~~givHrDlKp~NIll~~~~--~~~~vkL~D  156 (444)
T 3soa_A           80 SEEGHHYLIFDLVTGGELFEDIVARE-YYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKL--KGAAVKLAD  156 (444)
T ss_dssp             ECSSEEEEEECCCBCCBHHHHHHHCS-CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSSTTEEESBSS--TTCCEEECC
T ss_pred             EECCEEEEEEEeCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEeccC--CCCcEEEcc
Confidence            7788999999999 899999998765 699999999999999999999999999999999999998543  223699999


Q ss_pred             cCccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhh
Q 005221          296 LGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCKK  375 (708)
Q Consensus       296 FGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLltG~~Pf~~~~~~~~~~~i~~~  375 (708)
                      ||+++........        ....+||+.|+|||++.+..++.++|||||||+||+|++|.+||.+.+.......+...
T Consensus       157 FG~a~~~~~~~~~--------~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~  228 (444)
T 3soa_A          157 FGLAIEVEGEQQA--------WFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAG  228 (444)
T ss_dssp             CSSCBCCCTTCCB--------CCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHT
T ss_pred             CceeEEecCCCce--------eecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhC
Confidence            9999876543221        12467999999999999999999999999999999999999999876554444444444


Q ss_pred             ccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhHHHHhc
Q 005221          376 KMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKLIYQVG  443 (708)
Q Consensus       376 ~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~~f~~~  443 (708)
                      ........+. .+                     ...+.+||.+||..||.+|||+.|+|+||||...
T Consensus       229 ~~~~~~~~~~-~~---------------------s~~~~~li~~~L~~dP~~Rpta~e~L~hp~~~~~  274 (444)
T 3soa_A          229 AYDFPSPEWD-TV---------------------TPEAKDLINKMLTINPSKRITAAEALKHPWISHR  274 (444)
T ss_dssp             CCCCCTTTTT-TS---------------------CHHHHHHHHHHSCSSTTTSCCHHHHHHSCTTHHH
T ss_pred             CCCCCccccc-cC---------------------CHHHHHHHHHHcCCChhHCCCHHHHhcCccccCC
Confidence            3332222111 11                     2478999999999999999999999999999754


No 40 
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00  E-value=1.7e-44  Score=391.34  Aligned_cols=256  Identities=18%  Similarity=0.175  Sum_probs=210.5

Q ss_pred             CCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCC---CCCCCCChHHHHHHHHcCCCCCccEEEE
Q 005221          138 SPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSS---KGCNYGPPYEWQVYNTLGGSHGVPRVHF  214 (708)
Q Consensus       138 ~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~---~~~~~~~~~Ei~il~~L~h~~~v~~~~~  214 (708)
                      .++|++++.||+|+||.||+|++..          +++.||||++.+..   ......+..|..+|..+.++++|+.++.
T Consensus        19 ~~~y~~~~~lG~G~fg~V~~~~~~~----------~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~   88 (353)
T 2i0e_A           19 LTDFNFLMVLGKGSFGKVMLSERKG----------TDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHS   88 (353)
T ss_dssp             CTTEEEEEEEEEETTEEEEEEEETT----------EEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEE
T ss_pred             hHHcEEEEEEeeCCCEEEEEEEECC----------CCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEE
Confidence            3479999999999999999999977          78999999998642   2223346679999998866667777888


Q ss_pred             EeeeCCEEEEEEecC-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcEEE
Q 005221          215 KGRQGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFL  293 (708)
Q Consensus       215 ~~~~~~~~~lvme~~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~vkL  293 (708)
                      ++...+.+||||||+ ||+|.+++...+ .+++..++.++.||+.||.|||++|||||||||+||||+.++     .+||
T Consensus        89 ~~~~~~~~~lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g-----~vkL  162 (353)
T 2i0e_A           89 CFQTMDRLYFVMEYVNGGDLMYHIQQVG-RFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEG-----HIKI  162 (353)
T ss_dssp             EEECSSEEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTS-----CEEE
T ss_pred             EEEcCCEEEEEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEEcCCC-----cEEE
Confidence            888889999999999 899999998765 699999999999999999999999999999999999999887     5999


Q ss_pred             eccCccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCchhhhh
Q 005221          294 VDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVC  373 (708)
Q Consensus       294 ~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLltG~~Pf~~~~~~~~~~~i~  373 (708)
                      +|||+++.......        .....+||+.|+|||++.+..++.++|||||||+||||++|++||.+.+.......+.
T Consensus       163 ~DFG~a~~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~  234 (353)
T 2i0e_A          163 ADFGMCKENIWDGV--------TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIM  234 (353)
T ss_dssp             CCCTTCBCCCCTTC--------CBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH
T ss_pred             EeCCcccccccCCc--------ccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHHHHHHHHH
Confidence            99999986433221        1235789999999999999999999999999999999999999998765443333333


Q ss_pred             hhccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCc-----chHHHHhHHHHhc
Q 005221          374 KKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPI-----STEGAQKLIYQVG  443 (708)
Q Consensus       374 ~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps-----~~e~l~h~~f~~~  443 (708)
                      ......     +..+                     ...+.+||.+||..||.+||+     +.++++||||...
T Consensus       235 ~~~~~~-----p~~~---------------------s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h~~f~~~  283 (353)
T 2i0e_A          235 EHNVAY-----PKSM---------------------SKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYI  283 (353)
T ss_dssp             HCCCCC-----CTTS---------------------CHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTSGGGTTC
T ss_pred             hCCCCC-----CCCC---------------------CHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCccccCC
Confidence            322111     1111                     147899999999999999995     5999999999753


No 41 
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00  E-value=6.6e-45  Score=399.00  Aligned_cols=289  Identities=19%  Similarity=0.197  Sum_probs=208.3

Q ss_pred             CCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCC--CCCCCChHHHHHHHHcC-CCCCccEEEEE
Q 005221          139 PMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSK--GCNYGPPYEWQVYNTLG-GSHGVPRVHFK  215 (708)
Q Consensus       139 ~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~--~~~~~~~~Ei~il~~L~-h~~~v~~~~~~  215 (708)
                      ++|++++.||+|+||.||+|++..          +++.||||++.....  .......+|+.+|..+. |+|+|..+..+
T Consensus         9 ~~y~~~~~lG~G~~g~V~~~~~~~----------~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~   78 (388)
T 3oz6_A            9 RKYELVKKLGKGAYGIVWKSIDRR----------TGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVL   78 (388)
T ss_dssp             TTEEEEEC-------CEEEEEETT----------TCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEE
T ss_pred             CceEEEEEeeeCCCeEEEEEEECC----------CCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEE
Confidence            579999999999999999999987          789999999865421  12234568999999998 77766666665


Q ss_pred             ee-eCCEEEEEEecCCCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcEEEe
Q 005221          216 GR-QGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLV  294 (708)
Q Consensus       216 ~~-~~~~~~lvme~~ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~vkL~  294 (708)
                      .. ....+||||||++++|.+++...  .+++..+..++.||+.||+|||++|||||||||+||||+.++     .+||+
T Consensus        79 ~~~~~~~~~lv~e~~~~~L~~~~~~~--~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~-----~~kl~  151 (388)
T 3oz6_A           79 RADNDRDVYLVFDYMETDLHAVIRAN--ILEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILLNAEC-----HVKVA  151 (388)
T ss_dssp             ECTTSSCEEEEEECCSEEHHHHHHHT--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTC-----CEEEC
T ss_pred             ecCCCCEEEEEecccCcCHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHeEEcCCC-----CEEec
Confidence            43 34579999999999999999773  599999999999999999999999999999999999999887     59999


Q ss_pred             ccCccccccCCCCCcc-------------ccccCCCceeeccccccchhhhcC-CCCCchhhHHHHHHHHHHHHhCCCCC
Q 005221          295 DLGLATKWRDSTTGMH-------------VEYDQRPDVFRGTVRYASVHAHLG-RTGSRRDDLESLAYTLIFLLRGRLPW  360 (708)
Q Consensus       295 DFGla~~~~~~~~~~~-------------~~~~~~~~~~~GT~~Y~APE~~~~-~~~s~~~DIwSlGviL~eLltG~~Pf  360 (708)
                      |||+|+.+........             ..........+||+.|+|||++.+ ..++.++|||||||+||+|++|++||
T Consensus       152 DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf  231 (388)
T 3oz6_A          152 DFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIF  231 (388)
T ss_dssp             CCTTCEESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSC
T ss_pred             CCcccccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCC
Confidence            9999987644211100             000112234689999999999987 67899999999999999999999999


Q ss_pred             CCCCCCCchhhhhhhccCCCCCCccCCCChHHHHHHHHHHcC----------------------CCCCcccHHHHHHHHH
Q 005221          361 QGYQGENKGFLVCKKKMATSPDGLCCFCPAPFRQFVEYVVNL----------------------KFDEEPNYAKYISLFD  418 (708)
Q Consensus       361 ~~~~~~~~~~~i~~~~~~~~p~~l~~~~p~~~~~l~~~~~~~----------------------~~~~rP~~~~l~~LL~  418 (708)
                      .+.+..+....+......+.++.+....+.....+++.+...                      .+.. .-...+++||.
T Consensus       232 ~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dll~  310 (388)
T 3oz6_A          232 PGSSTMNQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKA-DCNEEALDLLD  310 (388)
T ss_dssp             CCSSHHHHHHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTC-CCCHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccc-cCCHHHHHHHH
Confidence            987766666655544333332222222222222222222111                      0000 11257999999


Q ss_pred             hhhCCCCCCCCcchHHHHhHHHHhccc
Q 005221          419 GIVGPNPDIRPISTEGAQKLIYQVGHK  445 (708)
Q Consensus       419 ~mL~~dP~~Rps~~e~l~h~~f~~~~~  445 (708)
                      +||..||++|||+.|+|+||||.....
T Consensus       311 ~~L~~dP~~R~t~~e~l~Hp~~~~~~~  337 (388)
T 3oz6_A          311 KLLQFNPNKRISANDALKHPFVSIFHN  337 (388)
T ss_dssp             HHCCSSGGGSCCHHHHTTSTTTTTTCC
T ss_pred             HhhccCcccCCCHHHHhCCHHHHHhcC
Confidence            999999999999999999999876543


No 42 
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00  E-value=3.5e-44  Score=399.45  Aligned_cols=263  Identities=18%  Similarity=0.170  Sum_probs=212.2

Q ss_pred             CCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecC---CCCCCCCChHHHHHHHHcCCCCCccEEEE
Q 005221          138 SPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRS---SKGCNYGPPYEWQVYNTLGGSHGVPRVHF  214 (708)
Q Consensus       138 ~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~---~~~~~~~~~~Ei~il~~L~h~~~v~~~~~  214 (708)
                      .++|+++++||+|+||.||+|++..          +++.||+|++.+.   .......+.+|+.++..++|++++..+ .
T Consensus        73 ~~~y~~~~~LG~G~fG~V~~~~~~~----------~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~-~  141 (437)
T 4aw2_A           73 REDFEILKVIGRGAFGEVAVVKLKN----------ADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLH-Y  141 (437)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETT----------TTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEE-E
T ss_pred             hhheEEEEEEEeCCCEEEEEEEEcC----------CCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEE-E
Confidence            3479999999999999999999987          7899999999763   223344578999999999888755554 5


Q ss_pred             EeeeCCEEEEEEecC-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcEEE
Q 005221          215 KGRQGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFL  293 (708)
Q Consensus       215 ~~~~~~~~~lvme~~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~vkL  293 (708)
                      ++.+++.+||||||+ ||+|.+++......+++..++.++.||+.||+|||++|||||||||+||||+.++     .+||
T Consensus       142 ~~~~~~~~~lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILl~~~g-----~vkL  216 (437)
T 4aw2_A          142 AFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNG-----HIRL  216 (437)
T ss_dssp             EEECSSEEEEEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTS-----CEEE
T ss_pred             EEeeCCEEEEEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeeEcCCC-----CEEE
Confidence            557788999999999 9999999988666799999999999999999999999999999999999999887     5999


Q ss_pred             eccCccccccCCCCCccccccCCCceeeccccccchhhhc-----CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCc
Q 005221          294 VDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHL-----GRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENK  368 (708)
Q Consensus       294 ~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~-----~~~~s~~~DIwSlGviL~eLltG~~Pf~~~~~~~~  368 (708)
                      +|||+|+........       .....+||+.|+|||++.     +..++.++|||||||+||||++|++||.+.+..+.
T Consensus       217 ~DFGla~~~~~~~~~-------~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~  289 (437)
T 4aw2_A          217 ADFGSCLKLMEDGTV-------QSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVET  289 (437)
T ss_dssp             CCCTTCEECCTTSCE-------ECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH
T ss_pred             cchhhhhhcccCCCc-------ccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHH
Confidence            999999876543321       122467999999999987     56789999999999999999999999998655444


Q ss_pred             hhhhhhhccCC-CCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCC--CCcchHHHHhHHHHhccc
Q 005221          369 GFLVCKKKMAT-SPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDI--RPISTEGAQKLIYQVGHK  445 (708)
Q Consensus       369 ~~~i~~~~~~~-~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~--Rps~~e~l~h~~f~~~~~  445 (708)
                      ...+....... .|..+ ..+                     ...+++||.+||..+|.+  |+++.|+++||||....+
T Consensus       290 ~~~i~~~~~~~~~p~~~-~~~---------------------s~~~~dLi~~lL~~~~~r~~r~~~~eil~Hpff~~i~w  347 (437)
T 4aw2_A          290 YGKIMNHKERFQFPTQV-TDV---------------------SENAKDLIRRLICSREHRLGQNGIEDFKKHPFFSGIDW  347 (437)
T ss_dssp             HHHHHTHHHHCCCCSSC-CCS---------------------CHHHHHHHHTTSSCGGGCTTTTTTHHHHTSGGGTTCCT
T ss_pred             HHhhhhccccccCCccc-ccC---------------------CHHHHHHHHHHhcccccccCCCCHHHHhCCCccCCCCH
Confidence            33333221111 11100 011                     257899999999998888  999999999999976543


No 43 
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00  E-value=2.5e-44  Score=388.83  Aligned_cols=255  Identities=20%  Similarity=0.221  Sum_probs=208.1

Q ss_pred             CCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCC---CCCCCCChHHHHHHHHc-CCCCCccEEE
Q 005221          138 SPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSS---KGCNYGPPYEWQVYNTL-GGSHGVPRVH  213 (708)
Q Consensus       138 ~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~---~~~~~~~~~Ei~il~~L-~h~~~v~~~~  213 (708)
                      .++|++++.||+|+||.||+|++..          +++.||||++++..   .........|..+|..+ +|++ |+.++
T Consensus        16 ~~~y~~~~~lG~G~fg~V~~~~~~~----------~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~-iv~l~   84 (345)
T 1xjd_A           16 IEDFILHKMLGKGSFGKVFLAEFKK----------TNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPF-LTHMF   84 (345)
T ss_dssp             CTTEEEEEEEEECSSSEEEEEEETT----------TTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTT-BCCEE
T ss_pred             hHHeEEEEEEeeCCCeEEEEEEECC----------CCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCC-CCcEE
Confidence            3579999999999999999999987          78999999998642   22233466799999987 6666 55555


Q ss_pred             EEeeeCCEEEEEEecC-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcEE
Q 005221          214 FKGRQGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLF  292 (708)
Q Consensus       214 ~~~~~~~~~~lvme~~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~vk  292 (708)
                      .++.+.+.+||||||+ ||+|.+++...+ .+++..++.++.||+.||+|||++|||||||||+||||+.++     .+|
T Consensus        85 ~~~~~~~~~~lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g-----~vk  158 (345)
T 1xjd_A           85 CTFQTKENLFFVMEYLNGGDLMYHIQSCH-KFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDG-----HIK  158 (345)
T ss_dssp             EEEECSSEEEEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTS-----CEE
T ss_pred             EEEEeCCEEEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCChhhEEECCCC-----CEE
Confidence            6667788999999999 899999998764 699999999999999999999999999999999999999887     599


Q ss_pred             EeccCccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCchhhh
Q 005221          293 LVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLV  372 (708)
Q Consensus       293 L~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLltG~~Pf~~~~~~~~~~~i  372 (708)
                      |+|||+++.......        .....+||+.|+|||++.+..++.++|||||||++|+|++|++||.+.+.......+
T Consensus       159 L~DFG~a~~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i  230 (345)
T 1xjd_A          159 IADFGMCKENMLGDA--------KTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSI  230 (345)
T ss_dssp             ECCCTTCBCCCCTTC--------CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH
T ss_pred             EeEChhhhhcccCCC--------cccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHHHHHHH
Confidence            999999986433221        123578999999999999999999999999999999999999999876543333333


Q ss_pred             hhhccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcch-HHHHhHHHHhc
Q 005221          373 CKKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPIST-EGAQKLIYQVG  443 (708)
Q Consensus       373 ~~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~-e~l~h~~f~~~  443 (708)
                      ......     ++..++                     ..+.+||.+||..||++||++. ++++||||...
T Consensus       231 ~~~~~~-----~p~~~s---------------------~~~~~li~~lL~~dp~~R~~~~~~i~~hp~f~~~  276 (345)
T 1xjd_A          231 RMDNPF-----YPRWLE---------------------KEAKDLLVKLFVREPEKRLGVRGDIRQHPLFREI  276 (345)
T ss_dssp             HHCCCC-----CCTTSC---------------------HHHHHHHHHHSCSSGGGSBTTBSCGGGSGGGTTC
T ss_pred             HhCCCC-----CCcccC---------------------HHHHHHHHHHhcCCHhHcCCChHHHHcCccccCC
Confidence            222111     111111                     4789999999999999999998 99999999754


No 44 
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00  E-value=6.5e-44  Score=382.12  Aligned_cols=260  Identities=17%  Similarity=0.179  Sum_probs=209.2

Q ss_pred             CCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCCC------CCCChHHHHHHHHcCCCCCccEE
Q 005221          139 PMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGC------NYGPPYEWQVYNTLGGSHGVPRV  212 (708)
Q Consensus       139 ~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~~------~~~~~~Ei~il~~L~h~~~v~~~  212 (708)
                      ++|++.+.||+|+||.||+|++..          ++..||+|++.......      ...+.+|+.+|+.|+|+|++..+
T Consensus        11 ~~y~~~~~lG~G~~g~V~~~~~~~----------~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~   80 (326)
T 2y0a_A           11 DYYDTGEELGSGQFAVVKKCREKS----------TGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLH   80 (326)
T ss_dssp             HHEEEEEEEECCSSEEEEEEEETT----------TCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred             cceEeceEEeeCCCeEEEEEEECC----------CCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEE
Confidence            469999999999999999999977          78999999998753321      22467899999999998866655


Q ss_pred             EEEeeeCCEEEEEEecC-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcE
Q 005221          213 HFKGRQGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKL  291 (708)
Q Consensus       213 ~~~~~~~~~~~lvme~~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~v  291 (708)
                      . ++.....+++||||+ +++|.+++...+ .+++..++.++.||+.||.|||++||+||||||+|||++.++. ....+
T Consensus        81 ~-~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~-~~~~~  157 (326)
T 2y0a_A           81 E-VYENKTDVILILELVAGGELFDFLAEKE-SLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNV-PKPRI  157 (326)
T ss_dssp             E-EEECSSEEEEEEECCCSCBHHHHHTTSS-CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSS-SSCCE
T ss_pred             E-EEEeCCEEEEEEEcCCCCCHHHHHHhcC-CcCHHHHHHHHHHHHHHHHHHHHCCeEcCCCCHHHEEEecCCC-CCCCE
Confidence            4 456788899999999 899999997654 6999999999999999999999999999999999999987662 23369


Q ss_pred             EEeccCccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCchhh
Q 005221          292 FLVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFL  371 (708)
Q Consensus       292 kL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLltG~~Pf~~~~~~~~~~~  371 (708)
                      ||+|||+++.......         ....+||+.|+|||++.+..++.++|||||||+||+|++|.+||.+.........
T Consensus       158 kl~Dfg~a~~~~~~~~---------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~  228 (326)
T 2y0a_A          158 KIIDFGLAHKIDFGNE---------FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLAN  228 (326)
T ss_dssp             EECCCTTCEECCTTSC---------CCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHH
T ss_pred             EEEECCCCeECCCCCc---------cccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHH
Confidence            9999999987654321         1235699999999999999999999999999999999999999987554333333


Q ss_pred             hhhhccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhHHHHh
Q 005221          372 VCKKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKLIYQV  442 (708)
Q Consensus       372 i~~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~~f~~  442 (708)
                      +........+ .....                     ....+.+||.+||..||++|||+.|+|+||||..
T Consensus       229 ~~~~~~~~~~-~~~~~---------------------~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~  277 (326)
T 2y0a_A          229 VSAVNYEFED-EYFSN---------------------TSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKP  277 (326)
T ss_dssp             HHHTCCCCCH-HHHTT---------------------SCHHHHHHHHHHSCSSGGGSCCHHHHHHSTTTSC
T ss_pred             HHhcCCCcCc-ccccc---------------------CCHHHHHHHHHHccCChhhCCCHHHHhcCCCccC
Confidence            3222211110 00000                     1246889999999999999999999999999864


No 45 
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00  E-value=2.3e-44  Score=383.77  Aligned_cols=278  Identities=21%  Similarity=0.244  Sum_probs=201.2

Q ss_pred             CCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCC-CCCCCChHHHHHHHHcCCCCCccEEEEEe
Q 005221          138 SPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSK-GCNYGPPYEWQVYNTLGGSHGVPRVHFKG  216 (708)
Q Consensus       138 ~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~-~~~~~~~~Ei~il~~L~h~~~v~~~~~~~  216 (708)
                      .++|+++++||+|+||.||+|++..          +++.||||++..... .....+.+|+.+|+.|+|+|++..+.. +
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~----------~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~-~   72 (317)
T 2pmi_A            4 SSQFKQLEKLGNGTYATVYKGLNKT----------TGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDV-I   72 (317)
T ss_dssp             ---------------CEEEEEECSS----------SCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEE-E
T ss_pred             ccceeEeeEECCCCCEEEEEEEECC----------CCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEE-E
Confidence            4579999999999999999999877          789999999976532 223456789999999999886665554 5


Q ss_pred             eeCCEEEEEEecCCCCHHHHHhccC-----CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcE
Q 005221          217 RQGDYYVMVMDMLGPSLWDVWNNNS-----HTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKL  291 (708)
Q Consensus       217 ~~~~~~~lvme~~ggsL~~~l~~~~-----~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~v  291 (708)
                      ..++.++|||||+.++|.+++....     ..+++..++.++.||+.||.|||++||+||||||+|||++.++     .+
T Consensus        73 ~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~-----~~  147 (317)
T 2pmi_A           73 HTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLINKRG-----QL  147 (317)
T ss_dssp             CCTTEEEEEEECCCCBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTC-----CE
T ss_pred             EECCeEEEEEEecCCCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCChHHeEEcCCC-----CE
Confidence            6778899999999989999987542     3599999999999999999999999999999999999999887     59


Q ss_pred             EEeccCccccccCCCCCccccccCCCceeeccccccchhhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCchh
Q 005221          292 FLVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGR-TGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGF  370 (708)
Q Consensus       292 kL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~-~~s~~~DIwSlGviL~eLltG~~Pf~~~~~~~~~~  370 (708)
                      ||+|||+++........        ....+||+.|+|||++.+. .++.++|||||||++|+|++|++||.+.+..+...
T Consensus       148 kl~Dfg~~~~~~~~~~~--------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~  219 (317)
T 2pmi_A          148 KLGDFGLARAFGIPVNT--------FSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLK  219 (317)
T ss_dssp             EECCCSSCEETTSCCCC--------CCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH
T ss_pred             EECcCccceecCCCccc--------CCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHH
Confidence            99999999876543211        1235699999999999874 68999999999999999999999999876655444


Q ss_pred             hhhhhccCCCCCCc-------------cCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHh
Q 005221          371 LVCKKKMATSPDGL-------------CCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQK  437 (708)
Q Consensus       371 ~i~~~~~~~~p~~l-------------~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h  437 (708)
                      .+......+....+             ....+..+.+.+..   ...  ..-...+.+||.+||..||++|||+.|+|+|
T Consensus       220 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~--~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~h  294 (317)
T 2pmi_A          220 LIFDIMGTPNESLWPSVTKLPKYNPNIQQRPPRDLRQVLQP---HTK--EPLDGNLMDFLHGLLQLNPDMRLSAKQALHH  294 (317)
T ss_dssp             HHHHHHCSCCTTTCGGGGGCTTCCTTCCCCCCCCSHHHHGG---GCS--SCCCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred             HHHHHhCCCChhHhhhhhhhhhcccccccccchhHHHhhcc---ccc--ccCCHHHHHHHHHHCCCCcccCCCHHHHhCC
Confidence            44433222221111             11111122222111   000  1123579999999999999999999999999


Q ss_pred             HHHHhcc
Q 005221          438 LIYQVGH  444 (708)
Q Consensus       438 ~~f~~~~  444 (708)
                      |||....
T Consensus       295 p~f~~~~  301 (317)
T 2pmi_A          295 PWFAEYY  301 (317)
T ss_dssp             GGGGGGC
T ss_pred             hhhhccc
Confidence            9997654


No 46 
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00  E-value=2.9e-44  Score=394.31  Aligned_cols=261  Identities=20%  Similarity=0.198  Sum_probs=212.5

Q ss_pred             CCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCCCCCCChHHHHHHHHcCCCCCccEEEEEeee
Q 005221          139 PMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNTLGGSHGVPRVHFKGRQ  218 (708)
Q Consensus       139 ~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~~~~~~~~Ei~il~~L~h~~~v~~~~~~~~~  218 (708)
                      ++|++++.||+|+||.||+|++..          +++.||+|++..........+.+|+.+|+.|+|+|+|..+. ++..
T Consensus        51 ~~y~i~~~LG~G~~g~Vy~~~~~~----------~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~-~~~~  119 (387)
T 1kob_A           51 DYYDILEELGSGAFGVVHRCVEKA----------TGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHD-AFED  119 (387)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETT----------TCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEE-EEEC
T ss_pred             cceEEEEEEecCCCEEEEEEEECC----------CCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEE-EEEe
Confidence            479999999999999999999977          78999999997654333345778999999999988666555 4567


Q ss_pred             CCEEEEEEecC-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcEEEeccC
Q 005221          219 GDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLG  297 (708)
Q Consensus       219 ~~~~~lvme~~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~vkL~DFG  297 (708)
                      ...++|||||+ |++|.+++......+++..++.++.||+.||.|||++||+||||||+|||++.++.   ..+||+|||
T Consensus       120 ~~~~~lv~E~~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~---~~vkL~DFG  196 (387)
T 1kob_A          120 KYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKA---SSVKIIDFG  196 (387)
T ss_dssp             SSEEEEEEECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTC---CCEEECCCT
T ss_pred             CCEEEEEEEcCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccchHHeEEecCCC---CceEEEecc
Confidence            88999999999 89999999877667999999999999999999999999999999999999975431   269999999


Q ss_pred             ccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhhcc
Q 005221          298 LATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCKKKM  377 (708)
Q Consensus       298 la~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLltG~~Pf~~~~~~~~~~~i~~~~~  377 (708)
                      +++.......         ....+||+.|+|||++.+..++.++|||||||+||+|++|.+||.+.+.......+.....
T Consensus       197 ~a~~~~~~~~---------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~  267 (387)
T 1kob_A          197 LATKLNPDEI---------VKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDW  267 (387)
T ss_dssp             TCEECCTTSC---------EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCC
T ss_pred             cceecCCCcc---------eeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC
Confidence            9987654322         1235699999999999999999999999999999999999999988654433333333222


Q ss_pred             CCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhHHHHhcc
Q 005221          378 ATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKLIYQVGH  444 (708)
Q Consensus       378 ~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~~f~~~~  444 (708)
                      ...+.. ...+                     ...+.+||.+||..||.+|||+.|+|+||||....
T Consensus       268 ~~~~~~-~~~~---------------------s~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~  312 (387)
T 1kob_A          268 EFDEDA-FSSV---------------------SPEAKDFIKNLLQKEPRKRLTVHDALEHPWLKGDH  312 (387)
T ss_dssp             CCCSST-TTTS---------------------CHHHHHHHHTTSCSSGGGSCCHHHHHTSTTTSSCC
T ss_pred             CCCccc-cccC---------------------CHHHHHHHHHHcCCChhHCcCHHHHhhCccccCCc
Confidence            211111 1111                     14789999999999999999999999999987543


No 47 
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00  E-value=7.4e-44  Score=384.67  Aligned_cols=257  Identities=17%  Similarity=0.181  Sum_probs=205.9

Q ss_pred             CCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCCCCCCChHHHHHHHHcC-CCCCccEEEEEee
Q 005221          139 PMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNTLG-GSHGVPRVHFKGR  217 (708)
Q Consensus       139 ~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~~~~~~~~Ei~il~~L~-h~~~v~~~~~~~~  217 (708)
                      ++|++++.||+|+||.||+|++..          +++.||||++.+..    ....+|+++|.++. |+| |+.++.++.
T Consensus        22 ~~y~~~~~lG~G~~g~V~~~~~~~----------~~~~~avK~~~~~~----~~~~~E~~~l~~~~~hp~-iv~~~~~~~   86 (342)
T 2qr7_A           22 DGYEVKEDIGVGSYSVCKRCIHKA----------TNMEFAVKIIDKSK----RDPTEEIEILLRYGQHPN-IITLKDVYD   86 (342)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETT----------TTEEEEEEEEETTT----CCCHHHHHHHHHHTTSTT-BCCEEEEEE
T ss_pred             ccEEEEEEEeeCCCEEEEEEEECC----------CCCEEEEEEEEccc----CChHHHHHHHHHhcCCCC-cCeEEEEEE
Confidence            469999999999999999999987          78999999997653    34678999999994 665 555666668


Q ss_pred             eCCEEEEEEecC-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcEEEecc
Q 005221          218 QGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDL  296 (708)
Q Consensus       218 ~~~~~~lvme~~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~vkL~DF  296 (708)
                      +++.+||||||+ ||+|.+++...+ .+++..++.++.||+.||.|||++||+||||||+|||+..... ....+||+||
T Consensus        87 ~~~~~~lv~E~~~gg~L~~~i~~~~-~~~~~~~~~~~~qi~~al~~lH~~givHrDlkp~NIl~~~~~~-~~~~~kl~Df  164 (342)
T 2qr7_A           87 DGKYVYVVTELMKGGELLDKILRQK-FFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESG-NPESIRICDF  164 (342)
T ss_dssp             CSSEEEEEECCCCSCBHHHHHHTCT-TCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSC-SGGGEEECCC
T ss_pred             cCCEEEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCcEeccCCHHHEEEecCCC-CcCeEEEEEC
Confidence            889999999999 899999998765 6999999999999999999999999999999999999855431 2346999999


Q ss_pred             CccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCchh---hhh
Q 005221          297 GLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGF---LVC  373 (708)
Q Consensus       297 Gla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLltG~~Pf~~~~~~~~~~---~i~  373 (708)
                      |+++........        ....+||+.|+|||++.+..++.++|||||||+||+|++|.+||.+........   .+.
T Consensus       165 g~a~~~~~~~~~--------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~  236 (342)
T 2qr7_A          165 GFAKQLRAENGL--------LMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIG  236 (342)
T ss_dssp             TTCEECBCTTCC--------BCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHH
T ss_pred             CCcccCcCCCCc--------eeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHc
Confidence            999876543221        124679999999999998889999999999999999999999998643332211   112


Q ss_pred             hhccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhHHHHh
Q 005221          374 KKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKLIYQV  442 (708)
Q Consensus       374 ~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~~f~~  442 (708)
                      .......... ...                     -...+.+||.+||..||++||++.|+++||||..
T Consensus       237 ~~~~~~~~~~-~~~---------------------~s~~~~~li~~~L~~dP~~R~t~~~il~hp~~~~  283 (342)
T 2qr7_A          237 SGKFSLSGGY-WNS---------------------VSDTAKDLVSKMLHVDPHQRLTAALVLRHPWIVH  283 (342)
T ss_dssp             HCCCCCCSTT-TTT---------------------SCHHHHHHHHHHTCSSTTTSCCHHHHTTSHHHHT
T ss_pred             cCCcccCccc-ccc---------------------CCHHHHHHHHHHCCCChhHCcCHHHHhcCCeecC
Confidence            2111111100 001                     1257899999999999999999999999999964


No 48 
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00  E-value=4.6e-44  Score=382.38  Aligned_cols=251  Identities=19%  Similarity=0.199  Sum_probs=207.9

Q ss_pred             CCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCC---CCCCCCChHHHHHHHHcCCCCCccEEEEE
Q 005221          139 PMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSS---KGCNYGPPYEWQVYNTLGGSHGVPRVHFK  215 (708)
Q Consensus       139 ~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~---~~~~~~~~~Ei~il~~L~h~~~v~~~~~~  215 (708)
                      ++|++++.||+|+||.||+|++..          +++.||+|++.+..   ......+.+|+.+++.++|+|++..+. .
T Consensus         6 ~~y~~~~~lG~G~~g~V~~~~~~~----------~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~-~   74 (318)
T 1fot_A            6 QDFQILRTLGTGSFGRVHLIRSRH----------NGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWG-T   74 (318)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETT----------TCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEE-E
T ss_pred             HHcEEEEEEeeCCCEEEEEEEECC----------CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeE-E
Confidence            479999999999999999999977          78999999997642   122334567999999999988666554 4


Q ss_pred             eeeCCEEEEEEecC-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcEEEe
Q 005221          216 GRQGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLV  294 (708)
Q Consensus       216 ~~~~~~~~lvme~~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~vkL~  294 (708)
                      +.+.+.+||||||+ |++|.+++...+ .+++..++.++.||+.||.|||++||+||||||+|||++.++     .+||+
T Consensus        75 ~~~~~~~~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g-----~~kL~  148 (318)
T 1fot_A           75 FQDAQQIFMIMDYIEGGELFSLLRKSQ-RFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNG-----HIKIT  148 (318)
T ss_dssp             EECSSEEEEEECCCCSCBHHHHHHHTS-SCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTS-----CEEEC
T ss_pred             EEeCCEEEEEEeCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCccccCCChheEEEcCCC-----CEEEe
Confidence            57788999999999 889999998764 699999999999999999999999999999999999999877     59999


Q ss_pred             ccCccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhh
Q 005221          295 DLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCK  374 (708)
Q Consensus       295 DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLltG~~Pf~~~~~~~~~~~i~~  374 (708)
                      |||+++......           ...+||+.|+|||++.+..++.++|||||||+||+|++|++||.+.+.......+..
T Consensus       149 Dfg~a~~~~~~~-----------~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~  217 (318)
T 1fot_A          149 DFGFAKYVPDVT-----------YTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILN  217 (318)
T ss_dssp             CCSSCEECSSCB-----------CCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHH
T ss_pred             ecCcceecCCcc-----------ccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHh
Confidence            999998754321           246799999999999999999999999999999999999999987554333333333


Q ss_pred             hccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCC-----cchHHHHhHHHHhc
Q 005221          375 KKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRP-----ISTEGAQKLIYQVG  443 (708)
Q Consensus       375 ~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rp-----s~~e~l~h~~f~~~  443 (708)
                      .....     +..+                     ...+.+||.+||..||++||     ++.|+++||||...
T Consensus       218 ~~~~~-----p~~~---------------------~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~hp~f~~~  265 (318)
T 1fot_A          218 AELRF-----PPFF---------------------NEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKEV  265 (318)
T ss_dssp             CCCCC-----CTTS---------------------CHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTSGGGSSC
T ss_pred             CCCCC-----CCCC---------------------CHHHHHHHHHHhccCHHHcCCCcCCCHHHHhcCccccCC
Confidence            22111     1111                     14789999999999999999     89999999999643


No 49 
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00  E-value=8.9e-44  Score=384.16  Aligned_cols=280  Identities=18%  Similarity=0.157  Sum_probs=218.5

Q ss_pred             CCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCCC--CCCChHHHHHHHHcCCCCCccEEEEE
Q 005221          138 SPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGC--NYGPPYEWQVYNTLGGSHGVPRVHFK  215 (708)
Q Consensus       138 ~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~~--~~~~~~Ei~il~~L~h~~~v~~~~~~  215 (708)
                      .++|+++++||+|+||.||+|++..          +++.||||++.......  ...+.+|+.+|+.|+|+|++..+..+
T Consensus        16 ~~~y~~~~~lg~G~~g~V~~~~~~~----------~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~   85 (351)
T 3mi9_A           16 VSKYEKLAKIGQGTFGEVFKARHRK----------TGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEIC   85 (351)
T ss_dssp             GGGEEEEEECSSCSTTSEEEEEETT----------TCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             ccceeEEEEEecCCCcEEEEEEECC----------CCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhhee
Confidence            3579999999999999999999977          78999999987653322  22456899999999999988877766


Q ss_pred             eee-------CCEEEEEEecCCCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCC
Q 005221          216 GRQ-------GDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDE  288 (708)
Q Consensus       216 ~~~-------~~~~~lvme~~ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~  288 (708)
                      ...       ++.++|||||++++|.+.+......+++..++.++.||+.||.|||++||+||||||+||||+.++    
T Consensus        86 ~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~----  161 (351)
T 3mi9_A           86 RTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDG----  161 (351)
T ss_dssp             EEC--------CEEEEEEECCSEEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTS----
T ss_pred             eccccccccCCceEEEEEeccCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCC----
Confidence            543       567999999999999999988766899999999999999999999999999999999999999877    


Q ss_pred             CcEEEeccCccccccCCCCCccccccCCCceeeccccccchhhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCC
Q 005221          289 KKLFLVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLG-RTGSRRDDLESLAYTLIFLLRGRLPWQGYQGEN  367 (708)
Q Consensus       289 ~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~-~~~s~~~DIwSlGviL~eLltG~~Pf~~~~~~~  367 (708)
                       .+||+|||+++.+........    ......+||+.|+|||++.+ ..++.++|||||||++|+|++|++||.+.....
T Consensus       162 -~~kl~Dfg~a~~~~~~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~  236 (351)
T 3mi9_A          162 -VLKLADFGLARAFSLAKNSQP----NRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQH  236 (351)
T ss_dssp             -CEEECCCTTCEECCCCSSSSC----CCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH
T ss_pred             -CEEEccchhcccccccccccc----cccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHH
Confidence             599999999987654332211    12234569999999999987 458999999999999999999999999876665


Q ss_pred             chhhhhhhccCCCCCCccCCCC--------------hHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchH
Q 005221          368 KGFLVCKKKMATSPDGLCCFCP--------------APFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTE  433 (708)
Q Consensus       368 ~~~~i~~~~~~~~p~~l~~~~p--------------~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e  433 (708)
                      ....+........+..++....              ..+...+...        .....+.+||.+||..||++|||+.|
T Consensus       237 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~li~~~L~~dP~~R~t~~e  308 (351)
T 3mi9_A          237 QLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAY--------VRDPYALDLIDKLLVLDPAQRIDSDD  308 (351)
T ss_dssp             HHHHHHHHHCCCCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHH--------HCCHHHHHHHHHHSCSSGGGSCCHHH
T ss_pred             HHHHHHHHhCCCChhhccccccchhhcccccccccccCHHHHhhhc--------cCChHHHHHHHHHhcCChhhCCCHHH
Confidence            5555555444444333221100              0000000000        00246899999999999999999999


Q ss_pred             HHHhHHHHhcc
Q 005221          434 GAQKLIYQVGH  444 (708)
Q Consensus       434 ~l~h~~f~~~~  444 (708)
                      +|+||||....
T Consensus       309 ~l~hp~f~~~~  319 (351)
T 3mi9_A          309 ALNHDFFWSDP  319 (351)
T ss_dssp             HHTSGGGGSSS
T ss_pred             HhCCCCcCCCC
Confidence            99999997543


No 50 
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00  E-value=9.6e-44  Score=380.44  Aligned_cols=262  Identities=22%  Similarity=0.254  Sum_probs=208.3

Q ss_pred             CCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCC-CCCCCCChHHHHHHHHcCCCCCccEEEEEe
Q 005221          138 SPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSS-KGCNYGPPYEWQVYNTLGGSHGVPRVHFKG  216 (708)
Q Consensus       138 ~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~-~~~~~~~~~Ei~il~~L~h~~~v~~~~~~~  216 (708)
                      .++|++++.||+|+||.||+|++..          +++.||||++.... ......+.+|+.+++.|+|+|++..+. ++
T Consensus         6 ~~~y~i~~~lG~G~~g~V~~~~~~~----------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~-~~   74 (323)
T 3tki_A            6 VEDWDLVQTLGEGAYGEVQLAVNRV----------TEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-HR   74 (323)
T ss_dssp             TTCEEEEEEEEEETTEEEEEEEETT----------TCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEE-EE
T ss_pred             hhhceeeeEEecCCCEEEEEEEECC----------CCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEE-EE
Confidence            4589999999999999999999987          78999999987542 233456889999999999988666555 55


Q ss_pred             eeCCEEEEEEecC-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcEEEec
Q 005221          217 RQGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVD  295 (708)
Q Consensus       217 ~~~~~~~lvme~~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~vkL~D  295 (708)
                      ..++..+|||||+ |++|.+++.... .+++..++.++.||+.||.|||++||+||||||+||||+.++     .+||+|
T Consensus        75 ~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~-----~~kl~D  148 (323)
T 3tki_A           75 REGNIQYLFLEYCSGGELFDRIEPDI-GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERD-----NLKISD  148 (323)
T ss_dssp             ECSSEEEEEEECCTTEEGGGGSBTTT-BCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTC-----CEEECC
T ss_pred             ecCCeEEEEEEcCCCCcHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHHHCCccccccchHHEEEeCCC-----CEEEEE
Confidence            7788999999999 889999987654 699999999999999999999999999999999999999877     599999


Q ss_pred             cCccccccCCCCCccccccCCCceeeccccccchhhhcCCCC-CchhhHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhh
Q 005221          296 LGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTG-SRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCK  374 (708)
Q Consensus       296 FGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~-s~~~DIwSlGviL~eLltG~~Pf~~~~~~~~~~~i~~  374 (708)
                      ||+++.+......      ......+||+.|+|||++.+..+ +.++|||||||+||+|++|+.||.+............
T Consensus       149 fg~a~~~~~~~~~------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~  222 (323)
T 3tki_A          149 FGLATVFRYNNRE------RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWK  222 (323)
T ss_dssp             CTTCEECEETTEE------CCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHH
T ss_pred             eeccceeccCCcc------cccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHh
Confidence            9999876433211      11224679999999999988876 7899999999999999999999987655433322222


Q ss_pred             hccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhHHHHhccc
Q 005221          375 KKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKLIYQVGHK  445 (708)
Q Consensus       375 ~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~~f~~~~~  445 (708)
                      ......+.  ...                     -...+.+||.+||..||++|||+.|+++||||+....
T Consensus       223 ~~~~~~~~--~~~---------------------~~~~~~~li~~~L~~dP~~R~t~~eil~h~~~~~~~~  270 (323)
T 3tki_A          223 EKKTYLNP--WKK---------------------IDSAPLALLHKILVENPSARITIPDIKKDRWYNKPLK  270 (323)
T ss_dssp             TTCTTSTT--GGG---------------------SCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTCCCC
T ss_pred             cccccCCc--ccc---------------------CCHHHHHHHHHHccCChhhCcCHHHHhhChhhccccc
Confidence            21111110  000                     1247889999999999999999999999999975443


No 51 
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00  E-value=1.3e-43  Score=390.83  Aligned_cols=258  Identities=19%  Similarity=0.146  Sum_probs=196.2

Q ss_pred             CeEEE-EeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCCCCCCChHHHHHHHHc-CCCCCccEEEEEee
Q 005221          140 MYRLE-RKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNTL-GGSHGVPRVHFKGR  217 (708)
Q Consensus       140 ~Y~i~-~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~~~~~~~~Ei~il~~L-~h~~~v~~~~~~~~  217 (708)
                      +|.+. +.||+|+||.||+|++..          +++.||||++...     ....+|+.++.++ +|+|++..+..+..
T Consensus        62 ~y~~~~~~LG~G~~g~V~~~~~~~----------~~~~vAiK~~~~~-----~~~~~E~~~~~~~~~hp~iv~l~~~~~~  126 (400)
T 1nxk_A           62 DYKVTSQVLGLGINGKVLQIFNKR----------TQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYEN  126 (400)
T ss_dssp             TEEEEEEEEEEETTEEEEEEEETT----------TCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEE
T ss_pred             cceeccceeeeccCeEEEEEEECC----------CCCEEEEEEeCcc-----hhHHHHHHHHHHhcCCCCcceEeEEEee
Confidence            58887 789999999999999987          7899999998642     2467899998655 56665555554432


Q ss_pred             ---eCCEEEEEEecC-CCCHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcEE
Q 005221          218 ---QGDYYVMVMDML-GPSLWDVWNNNS-HTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLF  292 (708)
Q Consensus       218 ---~~~~~~lvme~~-ggsL~~~l~~~~-~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~vk  292 (708)
                         ...++||||||+ ||+|.+++...+ ..+++..++.|+.||+.||.|||++|||||||||+||||+..+  ....+|
T Consensus       127 ~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~--~~~~~k  204 (400)
T 1nxk_A          127 LYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKR--PNAILK  204 (400)
T ss_dssp             EETTEEEEEEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSS--TTCCEE
T ss_pred             cccCCcEEEEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCcceEEEecCC--CCccEE
Confidence               256899999999 889999998753 4699999999999999999999999999999999999998742  123699


Q ss_pred             EeccCccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCc----
Q 005221          293 LVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENK----  368 (708)
Q Consensus       293 L~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLltG~~Pf~~~~~~~~----  368 (708)
                      |+|||+++.......         ....+||+.|+|||++.+..++.++|||||||+||+|++|++||.+......    
T Consensus       205 l~DFG~a~~~~~~~~---------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~  275 (400)
T 1nxk_A          205 LTDFGFAKETTSHNS---------LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGM  275 (400)
T ss_dssp             ECCCTTCEECC--------------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSH
T ss_pred             EEecccccccCCCCc---------cccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHH
Confidence            999999986543321         2246799999999999999999999999999999999999999987654331    


Q ss_pred             hhhhhhhccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhHHHHhccc
Q 005221          369 GFLVCKKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKLIYQVGHK  445 (708)
Q Consensus       369 ~~~i~~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~~f~~~~~  445 (708)
                      ...+...........+ ..+                     ...+.+||.+||..||++|||+.|+++||||.....
T Consensus       276 ~~~i~~~~~~~~~~~~-~~~---------------------s~~~~~li~~~L~~dP~~Rpt~~eil~hp~~~~~~~  330 (400)
T 1nxk_A          276 KTRIRMGQYEFPNPEW-SEV---------------------SEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTK  330 (400)
T ss_dssp             HHHHHHTCCCCCTTTT-TTS---------------------CHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHTTTT
T ss_pred             HHHHHcCcccCCCccc-ccC---------------------CHHHHHHHHHHCCCChhHCcCHHHHhcCccccCCCC
Confidence            1122222211111100 001                     257899999999999999999999999999986543


No 52 
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=1.7e-44  Score=393.24  Aligned_cols=279  Identities=15%  Similarity=0.203  Sum_probs=216.1

Q ss_pred             CCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCC--CCCCChHHHHHHHHcCCCCCccEEEEE
Q 005221          138 SPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKG--CNYGPPYEWQVYNTLGGSHGVPRVHFK  215 (708)
Q Consensus       138 ~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~--~~~~~~~Ei~il~~L~h~~~v~~~~~~  215 (708)
                      .++|++++.||+|+||.||+|++..          +++.||||++......  ....+.+|+.+|+.|+|+|++..+..+
T Consensus        24 ~~~y~~~~~lG~G~~g~V~~a~~~~----------~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~   93 (367)
T 1cm8_A           24 RAVYRDLQPVGSGAYGAVCSAVDGR----------TGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVF   93 (367)
T ss_dssp             BSSEEEEEEC------CEEEEEETT----------TCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEE
T ss_pred             cceEEEeEEeeecCCeEEEEEEECC----------CCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeE
Confidence            4589999999999999999999977          7899999998654221  123467899999999999988777776


Q ss_pred             eeeC-----CEEEEEEecCCCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCc
Q 005221          216 GRQG-----DYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKK  290 (708)
Q Consensus       216 ~~~~-----~~~~lvme~~ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~  290 (708)
                      ....     ..+|+|||+++++|.+++..  ..+++..++.++.||+.||.|||++||+||||||+|||++.++     .
T Consensus        94 ~~~~~~~~~~~~~lv~e~~~~~L~~~~~~--~~l~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~-----~  166 (367)
T 1cm8_A           94 TPDETLDDFTDFYLVMPFMGTDLGKLMKH--EKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDC-----E  166 (367)
T ss_dssp             CSCSSTTTCCCCEEEEECCSEEHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTC-----C
T ss_pred             ecCCccccCceEEEEEecCCCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCHHHEEEcCCC-----C
Confidence            5432     45799999999999999877  3599999999999999999999999999999999999999877     5


Q ss_pred             EEEeccCccccccCCCCCccccccCCCceeeccccccchhhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCch
Q 005221          291 LFLVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLG-RTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKG  369 (708)
Q Consensus       291 vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~-~~~s~~~DIwSlGviL~eLltG~~Pf~~~~~~~~~  369 (708)
                      +||+|||+++......           ...+||+.|+|||++.+ ..++.++|||||||++|+|++|++||.+.+..+..
T Consensus       167 ~kl~Dfg~a~~~~~~~-----------~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l  235 (367)
T 1cm8_A          167 LKILDFGLARQADSEM-----------TGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQL  235 (367)
T ss_dssp             EEECCCTTCEECCSSC-----------CSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHH
T ss_pred             EEEEeeeccccccccc-----------CcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence            9999999998754322           23569999999999988 67999999999999999999999999987766665


Q ss_pred             hhhhhhccCCCCCCccCCCChHHHHHHHHHHcCCCCCc----c-cHHHHHHHHHhhhCCCCCCCCcchHHHHhHHHHhcc
Q 005221          370 FLVCKKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEE----P-NYAKYISLFDGIVGPNPDIRPISTEGAQKLIYQVGH  444 (708)
Q Consensus       370 ~~i~~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~r----P-~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~~f~~~~  444 (708)
                      ..+......++.+.+....+.....++..........-    + -...+++||.+||..||.+|||+.|+|+||||+...
T Consensus       236 ~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~hp~f~~~~  315 (367)
T 1cm8_A          236 KEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLH  315 (367)
T ss_dssp             HHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC
T ss_pred             HHHHHhcCCCCHHHHHHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcChHHHhhc
Confidence            56655544443333333334444444444332221111    1 135799999999999999999999999999997654


No 53 
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00  E-value=1.6e-43  Score=379.14  Aligned_cols=217  Identities=39%  Similarity=0.733  Sum_probs=183.2

Q ss_pred             CCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCCCCCCChHHHHHHHHcCCCCCccEEEEEeee
Q 005221          139 PMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNTLGGSHGVPRVHFKGRQ  218 (708)
Q Consensus       139 ~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~~~~~~~~Ei~il~~L~h~~~v~~~~~~~~~  218 (708)
                      ++|++++.||+|+||.||+|++..          +++.||||++.....  ...+.+|+.+++.|.++++|+.+..++..
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~----------~~~~vavK~~~~~~~--~~~~~~E~~~l~~l~~h~~i~~~~~~~~~   76 (330)
T 2izr_A            9 PNFRVGKKIGCGNFGELRLGKNLY----------TNEYVAIKLEPMKSR--APQLHLEYRFYKQLGSGDGIPQVYYFGPC   76 (330)
T ss_dssp             TTEEEEEECCC-CTTSEEEEEETT----------TTEEEEEEEEETTCS--SCCHHHHHHHHHHHCSCTTSCCEEEEEEE
T ss_pred             CCeEEEEEeeccCCceEEEEEECC----------CCcEEEEEEeccccc--hHHHHHHHHHHHHhhCCCCCCEEEEEEec
Confidence            579999999999999999999877          789999999876533  45688999999999444446666667788


Q ss_pred             CCEEEEEEecCCCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcEEEeccCc
Q 005221          219 GDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGL  298 (708)
Q Consensus       219 ~~~~~lvme~~ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~vkL~DFGl  298 (708)
                      ++..+||||+++++|.+++......+++..++.|+.||+.||.|||++|||||||||+||||+.++......+||+|||+
T Consensus        77 ~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~  156 (330)
T 2izr_A           77 GKYNAMVLELLGPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFAL  156 (330)
T ss_dssp             TTEEEEEEECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTCTTSEEECCCTT
T ss_pred             CCccEEEEEeCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeeccCCCCCCceEEEEEccc
Confidence            89999999999999999998766689999999999999999999999999999999999999987743444599999999


Q ss_pred             cccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCc
Q 005221          299 ATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENK  368 (708)
Q Consensus       299 a~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLltG~~Pf~~~~~~~~  368 (708)
                      ++.+..........+ ......+||+.|+|||++.+..++.++|||||||+||+|++|++||.+....+.
T Consensus       157 a~~~~~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~  225 (330)
T 2izr_A          157 AKEYIDPETKKHIPY-REHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTL  225 (330)
T ss_dssp             CEESBCTTTCCBCCC-CCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSH
T ss_pred             ceeeecCCCCccccc-cccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccH
Confidence            998766544332221 123457799999999999999999999999999999999999999998655443


No 54 
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00  E-value=6.3e-44  Score=386.28  Aligned_cols=261  Identities=18%  Similarity=0.152  Sum_probs=207.0

Q ss_pred             CCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCC-----CCCCCCChHHHHHHHHcCCCCCccEEE
Q 005221          139 PMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSS-----KGCNYGPPYEWQVYNTLGGSHGVPRVH  213 (708)
Q Consensus       139 ~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~-----~~~~~~~~~Ei~il~~L~h~~~v~~~~  213 (708)
                      ++|++++.||+|+||.||+|++..          +++.||||++....     ......+.+|+.+++.|+|+|++..+.
T Consensus        24 ~~y~~~~~lG~G~~g~V~~~~~~~----------~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~   93 (351)
T 3c0i_A           24 DVYELCEVIGKGPFSVVRRCINRE----------TGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLE   93 (351)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETT----------TCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred             cceEEeeEEeeCCCEEEEEEEECC----------CCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEE
Confidence            479999999999999999999987          78999999987531     112334778999999999988666655


Q ss_pred             EEeeeCCEEEEEEecC-CCCHHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCC
Q 005221          214 FKGRQGDYYVMVMDML-GPSLWDVWNNN---SHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEK  289 (708)
Q Consensus       214 ~~~~~~~~~~lvme~~-ggsL~~~l~~~---~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~  289 (708)
                      . +...+.+||||||+ |++|.+.+...   +..+++..++.++.||+.||.|||++|||||||||+|||++.+++  ..
T Consensus        94 ~-~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivHrDlkp~NIl~~~~~~--~~  170 (351)
T 3c0i_A           94 T-YSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKEN--SA  170 (351)
T ss_dssp             E-EEETTEEEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECSSST--TC
T ss_pred             E-EEeCCEEEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChHHeEEecCCC--CC
Confidence            4 56788999999999 89999887643   345999999999999999999999999999999999999987652  34


Q ss_pred             cEEEeccCccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCch
Q 005221          290 KLFLVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKG  369 (708)
Q Consensus       290 ~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLltG~~Pf~~~~~~~~~  369 (708)
                      .+||+|||+++........        ....+||+.|+|||++.+..++.++|||||||+||+|++|++||.+... ...
T Consensus       171 ~vkl~Dfg~a~~~~~~~~~--------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~-~~~  241 (351)
T 3c0i_A          171 PVKLGGFGVAIQLGESGLV--------AGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE-RLF  241 (351)
T ss_dssp             CEEECCCTTCEECCTTSCB--------CCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHH-HHH
T ss_pred             cEEEecCcceeEecCCCee--------ecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHH-HHH
Confidence            6999999999876553221        1245699999999999999999999999999999999999999987421 111


Q ss_pred             hhhhhhccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhHHHHhc
Q 005221          370 FLVCKKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKLIYQVG  443 (708)
Q Consensus       370 ~~i~~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~~f~~~  443 (708)
                      ..+........+..+ ..                     -...+.+||.+||..||++|||+.|+|+||||...
T Consensus       242 ~~i~~~~~~~~~~~~-~~---------------------~s~~~~~li~~~L~~dP~~R~s~~e~l~hp~~~~~  293 (351)
T 3c0i_A          242 EGIIKGKYKMNPRQW-SH---------------------ISESAKDLVRRMLMLDPAERITVYEALNHPWLKER  293 (351)
T ss_dssp             HHHHHTCCCCCHHHH-TT---------------------SCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHTH
T ss_pred             HHHHcCCCCCCcccc-cc---------------------CCHHHHHHHHHHCCCChhHCcCHHHHhcChhhcCC
Confidence            122222211111000 00                     12578999999999999999999999999999753


No 55 
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00  E-value=2e-43  Score=383.93  Aligned_cols=260  Identities=19%  Similarity=0.187  Sum_probs=199.5

Q ss_pred             CCCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCCCCCCChHHHHHHHHcCCCCCccEEEEEe
Q 005221          137 GSPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNTLGGSHGVPRVHFKG  216 (708)
Q Consensus       137 ~~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~~~~~~~~Ei~il~~L~h~~~v~~~~~~~  216 (708)
                      ..++|++++.||+|+||.||+|++..          +++.||||++..... ....+.+|+.+++.|+|+|++..+. ++
T Consensus        18 ~~~~y~~~~~lG~G~~g~V~~~~~~~----------~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~-~~   85 (361)
T 3uc3_A           18 DSDRYDFVKDIGSGNFGVARLMRDKL----------TKELVAVKYIERGAA-IDENVQREIINHRSLRHPNIVRFKE-VI   85 (361)
T ss_dssp             CTTTEEEEEEESSSTTSSEEEEEETT----------TCCEEEEEEEESSTT-SCHHHHHHHHHHHHCCCTTBCCEEE-EE
T ss_pred             CCCcEEEEEEeccCCCEEEEEEEECC----------CCcEEEEEEEecCcc-ccHHHHHHHHHHHhCCCCCCCcEEE-EE
Confidence            45689999999999999999999987          789999999976533 2345779999999999988666555 45


Q ss_pred             eeCCEEEEEEecC-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcEEEec
Q 005221          217 RQGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVD  295 (708)
Q Consensus       217 ~~~~~~~lvme~~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~vkL~D  295 (708)
                      ...+.+++||||+ |++|.+++...+ .+++..++.++.||+.||.|||++||+||||||+||||+.++.   ..+||+|
T Consensus        86 ~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~ql~~~L~~LH~~~ivH~Dlkp~Nill~~~~~---~~~kl~D  161 (361)
T 3uc3_A           86 LTPTHLAIIMEYASGGELYERICNAG-RFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGSPA---PRLKICD  161 (361)
T ss_dssp             ECSSEEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTCCSCCCCGGGEEECSSSS---CCEEECC
T ss_pred             eeCCEEEEEEEeCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCC---ceEEEee
Confidence            6778899999999 899999997765 6999999999999999999999999999999999999986552   2599999


Q ss_pred             cCccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCch-hhHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhh
Q 005221          296 LGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRR-DDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCK  374 (708)
Q Consensus       296 FGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~-~DIwSlGviL~eLltG~~Pf~~~~~~~~~~~i~~  374 (708)
                      ||+++......         .....+||+.|+|||++.+..++.+ +|||||||+||+|++|++||.+.........+. 
T Consensus       162 fg~a~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~-  231 (361)
T 3uc3_A          162 FGYSKSSVLHS---------QPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTI-  231 (361)
T ss_dssp             CCCC------------------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHH-
T ss_pred             cCccccccccC---------CCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHH-
Confidence            99997533221         1234569999999999999888655 899999999999999999998765443322222 


Q ss_pred             hccCCCCCCccCCCChHHHHHHHHHHcCCCCCc---ccHHHHHHHHHhhhCCCCCCCCcchHHHHhHHHHhcc
Q 005221          375 KKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEE---PNYAKYISLFDGIVGPNPDIRPISTEGAQKLIYQVGH  444 (708)
Q Consensus       375 ~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~r---P~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~~f~~~~  444 (708)
                                            ..+....+...   .-...+.+||.+||..||++|||+.|+++||||....
T Consensus       232 ----------------------~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~hp~f~~~~  282 (361)
T 3uc3_A          232 ----------------------QRILSVKYSIPDDIRISPECCHLISRIFVADPATRISIPEIKTHSWFLKNL  282 (361)
T ss_dssp             ----------------------HHHHTTCCCCCTTSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTSHHHHTTC
T ss_pred             ----------------------HHHhcCCCCCCCcCCCCHHHHHHHHHHccCChhHCcCHHHHHhCcchhcCC
Confidence                                  22221111110   0125789999999999999999999999999997543


No 56 
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00  E-value=5.4e-43  Score=368.05  Aligned_cols=266  Identities=33%  Similarity=0.595  Sum_probs=208.9

Q ss_pred             CCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCCCCCCChHHHHHHHHcCCCCCccEEEEEeee
Q 005221          139 PMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNTLGGSHGVPRVHFKGRQ  218 (708)
Q Consensus       139 ~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~~~~~~~~Ei~il~~L~h~~~v~~~~~~~~~  218 (708)
                      ++|++++.||+|+||.||+|++..          +++.||||++.....  ...+.+|+.+++.|.++++++.+..++..
T Consensus        10 ~~y~~~~~lg~G~~g~V~~~~~~~----------~~~~vavK~~~~~~~--~~~~~~e~~~~~~l~~~~~i~~~~~~~~~   77 (298)
T 1csn_A           10 VHYKVGRRIGEGSFGVIFEGTNLL----------NNQQVAIKFEPRRSD--APQLRDEYRTYKLLAGCTGIPNVYYFGQE   77 (298)
T ss_dssp             TTEEEEEEEEECSSCEEEEEEETT----------TTEEEEEEEEECCTT--SCCHHHHHHHHHHTTTCTTCCCEEEEEEE
T ss_pred             cceEEEEEEeecCCEEEEEEEECC----------CCcEEEEEEeccCCc--cHHHHHHHHHHHHHhcCCCCCeEEeecCC
Confidence            479999999999999999999877          789999999875532  45688999999999766667777778889


Q ss_pred             CCEEEEEEecCCCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcEEEeccCc
Q 005221          219 GDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGL  298 (708)
Q Consensus       219 ~~~~~lvme~~ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~vkL~DFGl  298 (708)
                      +..+++|||+++++|.+++...+..+++..++.++.||+.||.|||++||+||||||+|||++.++......+||+|||+
T Consensus        78 ~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~  157 (298)
T 1csn_A           78 GLHNVLVIDLLGPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGM  157 (298)
T ss_dssp             TTEEEEEEECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTT
T ss_pred             CceeEEEEEecCCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEeccCCCCCCCeEEEEECcc
Confidence            99999999999999999998877679999999999999999999999999999999999999887754555799999999


Q ss_pred             cccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCchhhh---hhh
Q 005221          299 ATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLV---CKK  375 (708)
Q Consensus       299 a~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLltG~~Pf~~~~~~~~~~~i---~~~  375 (708)
                      ++............+ ......+||+.|+|||++.+..++.++|||||||+||+|++|+.||.+..........   ...
T Consensus       158 ~~~~~~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~  236 (298)
T 1csn_A          158 VKFYRDPVTKQHIPY-REKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEK  236 (298)
T ss_dssp             CEESBCTTTCCBCCC-CCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHH
T ss_pred             ccccccccccccccc-cCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhh
Confidence            998766543322211 1234567999999999999999999999999999999999999999986544332222   112


Q ss_pred             ccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhH
Q 005221          376 KMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKL  438 (708)
Q Consensus       376 ~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~  438 (708)
                      ........++..+|.                     .+.+|+.+||..||++||++.++++..
T Consensus       237 ~~~~~~~~~~~~~~~---------------------~l~~li~~~l~~dp~~RP~~~~l~~~l  278 (298)
T 1csn_A          237 KQSTPLRELCAGFPE---------------------EFYKYMHYARNLAFDATPDYDYLQGLF  278 (298)
T ss_dssp             HHHSCHHHHTTTSCH---------------------HHHHHHHHHHHCCTTCCCCHHHHHHHH
T ss_pred             ccCccHHHHHhhCcH---------------------HHHHHHHHHhcCCcccCCCHHHHHHHH
Confidence            221222222223443                     456666666666666666666665543


No 57 
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00  E-value=6.8e-44  Score=386.17  Aligned_cols=251  Identities=17%  Similarity=0.173  Sum_probs=209.0

Q ss_pred             CCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCC---CCCCCCChHHHHHHHHcCCCCCccEEEEE
Q 005221          139 PMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSS---KGCNYGPPYEWQVYNTLGGSHGVPRVHFK  215 (708)
Q Consensus       139 ~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~---~~~~~~~~~Ei~il~~L~h~~~v~~~~~~  215 (708)
                      ++|++++.||+|+||.||+|++..          +++.||||++.+..   ......+.+|+.+|+.++|++++.. +.+
T Consensus        41 ~~y~~~~~lG~G~~g~V~~~~~~~----------~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~-~~~  109 (350)
T 1rdq_E           41 DQFDRIKTLGTGSFGRVMLVKHKE----------SGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL-EFS  109 (350)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETT----------TCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCE-EEE
T ss_pred             HHCEEEEEeecCcCcEEEEEEECC----------CCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeE-EEE
Confidence            479999999999999999999987          78999999987642   1223346789999999999886654 555


Q ss_pred             eeeCCEEEEEEecC-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcEEEe
Q 005221          216 GRQGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLV  294 (708)
Q Consensus       216 ~~~~~~~~lvme~~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~vkL~  294 (708)
                      +.+.+.+||||||+ |++|.+++.+.+ .+++..++.++.||+.||+|||++||+||||||+||||+.++     .+||+
T Consensus       110 ~~~~~~~~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g-----~~kL~  183 (350)
T 1rdq_E          110 FKDNSNLYMVMEYVAGGEMFSHLRRIG-RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG-----YIQVT  183 (350)
T ss_dssp             EECSSEEEEEEECCTTCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTS-----CEEEC
T ss_pred             EEcCCEEEEEEcCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCcccccCccceEEECCCC-----CEEEc
Confidence            57788999999999 899999998765 699999999999999999999999999999999999999887     59999


Q ss_pred             ccCccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhh
Q 005221          295 DLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCK  374 (708)
Q Consensus       295 DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLltG~~Pf~~~~~~~~~~~i~~  374 (708)
                      |||+++......           ...+||+.|+|||++.+..++.++|||||||+||+|++|++||.+.+.......+..
T Consensus       184 DFg~a~~~~~~~-----------~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~  252 (350)
T 1rdq_E          184 DFGFAKRVKGRT-----------WTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS  252 (350)
T ss_dssp             CCTTCEECSSCB-----------CCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH
T ss_pred             ccccceeccCCc-----------ccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHHHHHHHHc
Confidence            999998764421           246799999999999999999999999999999999999999987654443333333


Q ss_pred             hccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCc-----chHHHHhHHHHhc
Q 005221          375 KKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPI-----STEGAQKLIYQVG  443 (708)
Q Consensus       375 ~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps-----~~e~l~h~~f~~~  443 (708)
                      .....     +..++                     ..+.+||.+||..||.+||+     +.|+++||||...
T Consensus       253 ~~~~~-----p~~~~---------------------~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h~~f~~~  300 (350)
T 1rdq_E          253 GKVRF-----PSHFS---------------------SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATT  300 (350)
T ss_dssp             CCCCC-----CTTCC---------------------HHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTSGGGTTC
T ss_pred             CCCCC-----CCCCC---------------------HHHHHHHHHHhhcCHHhccCCccCCHHHHHhCcCcCCC
Confidence            32211     11122                     47889999999999999998     9999999999754


No 58 
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00  E-value=4.7e-44  Score=395.56  Aligned_cols=263  Identities=20%  Similarity=0.204  Sum_probs=210.5

Q ss_pred             CCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecC---CCCCCCCChHHHHHHHHcCCCCCccEEEE
Q 005221          138 SPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRS---SKGCNYGPPYEWQVYNTLGGSHGVPRVHF  214 (708)
Q Consensus       138 ~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~---~~~~~~~~~~Ei~il~~L~h~~~v~~~~~  214 (708)
                      .++|++++.||+|+||.||+|++..          +++.||||++++.   .......+.+|..+|..++|++++. ++.
T Consensus        60 ~~~f~~~~~lG~G~fG~V~~~~~~~----------~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~-l~~  128 (412)
T 2vd5_A           60 RDDFEILKVIGRGAFSEVAVVKMKQ----------TGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQ-LHF  128 (412)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETT----------TCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCC-EEE
T ss_pred             hhhEEEEEEEeeCCCeEEEEEEECC----------CCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeee-EEE
Confidence            3479999999999999999999977          7899999999753   2223456788999999999877555 555


Q ss_pred             EeeeCCEEEEEEecC-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcEEE
Q 005221          215 KGRQGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFL  293 (708)
Q Consensus       215 ~~~~~~~~~lvme~~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~vkL  293 (708)
                      ++.+.+++||||||+ ||+|.+++.+.+..+++..++.++.||+.||+|||++|||||||||+||||+.++     .+||
T Consensus       129 ~~~~~~~~~lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILld~~g-----~vkL  203 (412)
T 2vd5_A          129 AFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCG-----HIRL  203 (412)
T ss_dssp             EEECSSEEEEEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTS-----CEEE
T ss_pred             EEeeCCEEEEEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccCHHHeeecCCC-----CEEE
Confidence            557788999999999 9999999987666799999999999999999999999999999999999999887     5999


Q ss_pred             eccCccccccCCCCCccccccCCCceeeccccccchhhhc-------CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCC
Q 005221          294 VDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHL-------GRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGE  366 (708)
Q Consensus       294 ~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~-------~~~~s~~~DIwSlGviL~eLltG~~Pf~~~~~~  366 (708)
                      +|||+++........       .....+||+.|+|||++.       +..++.++|||||||+||||++|++||.+.+..
T Consensus       204 ~DFGla~~~~~~~~~-------~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~  276 (412)
T 2vd5_A          204 ADFGSCLKLRADGTV-------RSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTA  276 (412)
T ss_dssp             CCCTTCEECCTTSCE-------ECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHH
T ss_pred             eechhheeccCCCcc-------ccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHH
Confidence            999999876543221       112467999999999987       457899999999999999999999999886554


Q ss_pred             CchhhhhhhccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCC---CcchHHHHhHHHHhc
Q 005221          367 NKGFLVCKKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIR---PISTEGAQKLIYQVG  443 (708)
Q Consensus       367 ~~~~~i~~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~R---ps~~e~l~h~~f~~~  443 (708)
                      +....+...........+...++                     ..+.+||.+||. +|++|   |++.|+++||||...
T Consensus       277 ~~~~~i~~~~~~~~~p~~~~~~s---------------------~~~~dli~~lL~-~p~~Rlgr~~~~ei~~Hpff~~i  334 (412)
T 2vd5_A          277 ETYGKIVHYKEHLSLPLVDEGVP---------------------EEARDFIQRLLC-PPETRLGRGGAGDFRTHPFFFGL  334 (412)
T ss_dssp             HHHHHHHTHHHHCCCC----CCC---------------------HHHHHHHHTTSS-CGGGCTTTTTHHHHHTSGGGTTC
T ss_pred             HHHHHHHhcccCcCCCccccCCC---------------------HHHHHHHHHHcC-ChhhcCCCCCHHHHhcCCCcCCC
Confidence            44333333221111111111122                     478999999999 99998   599999999999765


Q ss_pred             cc
Q 005221          444 HK  445 (708)
Q Consensus       444 ~~  445 (708)
                      .+
T Consensus       335 ~w  336 (412)
T 2vd5_A          335 DW  336 (412)
T ss_dssp             CS
T ss_pred             CH
Confidence            43


No 59 
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00  E-value=7e-44  Score=393.95  Aligned_cols=259  Identities=22%  Similarity=0.257  Sum_probs=210.3

Q ss_pred             CCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecC---CCCCCCCChHHHHHHHHcCCCCCccEEEE
Q 005221          138 SPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRS---SKGCNYGPPYEWQVYNTLGGSHGVPRVHF  214 (708)
Q Consensus       138 ~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~---~~~~~~~~~~Ei~il~~L~h~~~v~~~~~  214 (708)
                      .++|++++.||+|+||.||+|++..          +++.||+|++.+.   .......+.+|+.++..++|+|+|..+ .
T Consensus        68 ~~~y~~~~~LG~G~fG~V~~~~~~~----------~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~-~  136 (410)
T 3v8s_A           68 AEDYEVVKVIGRGAFGEVQLVRHKS----------TRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLF-Y  136 (410)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETT----------TCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEE-E
T ss_pred             ccccEEEEEEEcCCCEEEEEEEECC----------CCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEE-E
Confidence            3479999999999999999999987          7899999999763   223344578899999999998866655 4


Q ss_pred             EeeeCCEEEEEEecC-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcEEE
Q 005221          215 KGRQGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFL  293 (708)
Q Consensus       215 ~~~~~~~~~lvme~~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~vkL  293 (708)
                      ++.+++.+||||||+ ||+|.+++...  .+++..++.++.||+.||+|||++|||||||||+||||+.++     .+||
T Consensus       137 ~~~~~~~~~lV~E~~~gg~L~~~l~~~--~~~e~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g-----~ikL  209 (410)
T 3v8s_A          137 AFQDDRYLYMVMEYMPGGDLVNLMSNY--DVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSG-----HLKL  209 (410)
T ss_dssp             EEECSSEEEEEECCCTTEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTS-----CEEE
T ss_pred             EEEECCEEEEEEeCCCCCcHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeeECCCC-----CEEE
Confidence            557788999999999 99999998764  599999999999999999999999999999999999999887     5999


Q ss_pred             eccCccccccCCCCCccccccCCCceeeccccccchhhhcCCC----CCchhhHHHHHHHHHHHHhCCCCCCCCCCCCch
Q 005221          294 VDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRT----GSRRDDLESLAYTLIFLLRGRLPWQGYQGENKG  369 (708)
Q Consensus       294 ~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~----~s~~~DIwSlGviL~eLltG~~Pf~~~~~~~~~  369 (708)
                      +|||+|+........       .....+||+.|+|||++.+..    ++.++|||||||+||||++|++||.+.+.....
T Consensus       210 ~DFG~a~~~~~~~~~-------~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~  282 (410)
T 3v8s_A          210 ADFGTCMKMNKEGMV-------RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTY  282 (410)
T ss_dssp             CCCTTCEECCTTSEE-------ECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHHH
T ss_pred             eccceeEeeccCCcc-------cccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhHH
Confidence            999999876543211       123567999999999998766    789999999999999999999999876544433


Q ss_pred             hhhhhhccCCCCCCccCCCChHHHHHHHHHHcCCCCCcc-cHHHHHHHHHhhhCCCCCC--CCcchHHHHhHHHHhcc
Q 005221          370 FLVCKKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEP-NYAKYISLFDGIVGPNPDI--RPISTEGAQKLIYQVGH  444 (708)
Q Consensus       370 ~~i~~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP-~~~~l~~LL~~mL~~dP~~--Rps~~e~l~h~~f~~~~  444 (708)
                      ..+.....                       ...+...+ -...+.+||.+||..+|.+  ||++.|+++||||+...
T Consensus       283 ~~i~~~~~-----------------------~~~~p~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~Hp~f~~~~  337 (410)
T 3v8s_A          283 SKIMNHKN-----------------------SLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKNDQ  337 (410)
T ss_dssp             HHHHTHHH-----------------------HCCCCTTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTSGGGCCSS
T ss_pred             HHHHhccc-----------------------cccCCCcccccHHHHHHHHHHccChhhhCCCCCHHHHhcCccccCCC
Confidence            33333221                       11111111 1257899999999998988  99999999999997654


No 60 
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00  E-value=1.2e-43  Score=374.17  Aligned_cols=253  Identities=18%  Similarity=0.221  Sum_probs=199.1

Q ss_pred             CCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCC--------------------------CCCC
Q 005221          139 PMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKG--------------------------CNYG  192 (708)
Q Consensus       139 ~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~--------------------------~~~~  192 (708)
                      ++|++.+.||+|+||.||+|++..          +++.||||++......                          ....
T Consensus        13 ~~y~~~~~lG~G~~g~Vy~a~~~~----------~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (298)
T 2zv2_A           13 NQYTLKDEIGKGSYGVVKLAYNEN----------DNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQ   82 (298)
T ss_dssp             TTEEEEEEEEC--CCEEEEEEETT----------TTEEEEEEEEECC-------------------------------CH
T ss_pred             cceEEEeEEeecCCEEEEEEEECC----------CCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHH
Confidence            479999999999999999999977          7899999998764311                          1234


Q ss_pred             ChHHHHHHHHcCCCCCccEEEEEee-eCCEEEEEEecC-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCcee
Q 005221          193 PPYEWQVYNTLGGSHGVPRVHFKGR-QGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVH  270 (708)
Q Consensus       193 ~~~Ei~il~~L~h~~~v~~~~~~~~-~~~~~~lvme~~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvH  270 (708)
                      +.+|+++|+.|+|+|++..+..+.. .++.++|||||+ +++|.+++..  ..+++..++.++.||+.||.|||++||+|
T Consensus        83 ~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~ivH  160 (298)
T 2zv2_A           83 VYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL--KPLSEDQARFYFQDLIKGIEYLHYQKIIH  160 (298)
T ss_dssp             HHHHHHHHHTCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCS--SCCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred             HHHHHHHHHhCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence            6789999999999997777776653 367899999999 7888876543  36999999999999999999999999999


Q ss_pred             cCCCCCcEEeCCCCCCCCCcEEEeccCccccccCCCCCccccccCCCceeeccccccchhhhcCCC---CCchhhHHHHH
Q 005221          271 GDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRT---GSRRDDLESLA  347 (708)
Q Consensus       271 rDIKP~NILl~~~g~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~---~s~~~DIwSlG  347 (708)
                      |||||+|||++.++     .+||+|||+++........        ....+||+.|+|||++.+..   ++.++||||||
T Consensus       161 ~Dlkp~Nil~~~~~-----~~kl~Dfg~~~~~~~~~~~--------~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG  227 (298)
T 2zv2_A          161 RDIKPSNLLVGEDG-----HIKIADFGVSNEFKGSDAL--------LSNTVGTPAFMAPESLSETRKIFSGKALDVWAMG  227 (298)
T ss_dssp             CCCCGGGEEECTTS-----CEEECCCTTCEECSSSSCE--------ECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHH
T ss_pred             cCCCHHHEEECCCC-----CEEEecCCCcccccccccc--------ccCCcCCccccChhhhccCCCCCCCchhhhHhHH
Confidence            99999999998877     5999999999876543211        12356999999999998765   37899999999


Q ss_pred             HHHHHHHhCCCCCCCCCCCCchhhhhhhccCCCCCCccCCCChHHHHHHHHHHcCCCCCcc-cHHHHHHHHHhhhCCCCC
Q 005221          348 YTLIFLLRGRLPWQGYQGENKGFLVCKKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEP-NYAKYISLFDGIVGPNPD  426 (708)
Q Consensus       348 viL~eLltG~~Pf~~~~~~~~~~~i~~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP-~~~~l~~LL~~mL~~dP~  426 (708)
                      |+||+|++|+.||.+.........+.......                         ...+ -...+.+||.+||..||+
T Consensus       228 ~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~l~~li~~~l~~dp~  282 (298)
T 2zv2_A          228 VTLYCFVFGQCPFMDERIMCLHSKIKSQALEF-------------------------PDQPDIAEDLKDLITRMLDKNPE  282 (298)
T ss_dssp             HHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCC-------------------------CSSSCCCHHHHHHHHHHTCSCTT
T ss_pred             HHHHHHHHCCCCCCCccHHHHHHHHhcccCCC-------------------------CCccccCHHHHHHHHHHhhcChh
Confidence            99999999999998754322211121111100                         0011 125789999999999999


Q ss_pred             CCCcchHHHHhHHHH
Q 005221          427 IRPISTEGAQKLIYQ  441 (708)
Q Consensus       427 ~Rps~~e~l~h~~f~  441 (708)
                      +|||+.|+++||||.
T Consensus       283 ~R~s~~e~l~hp~~~  297 (298)
T 2zv2_A          283 SRIVVPEIKLHPWVT  297 (298)
T ss_dssp             TSCCHHHHTTCHHHH
T ss_pred             hCCCHHHHhcCcccc
Confidence            999999999999985


No 61 
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00  E-value=6.2e-44  Score=386.53  Aligned_cols=280  Identities=20%  Similarity=0.243  Sum_probs=207.8

Q ss_pred             CCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCCCCCCChHHHHHHHHcC-----CCCCccEE
Q 005221          138 SPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNTLG-----GSHGVPRV  212 (708)
Q Consensus       138 ~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~~~~~~~~Ei~il~~L~-----h~~~v~~~  212 (708)
                      .++|+++++||+|+||.||+|++..          +++.||||++..... .......|+.+++.+.     |+|+ +.+
T Consensus        34 ~~~y~~~~~lG~G~~g~V~~~~~~~----------~~~~vavK~~~~~~~-~~~~~~~e~~~l~~l~~~~~~h~~i-v~~  101 (360)
T 3llt_A           34 NNAFLVIRKMGDGTFGRVLLCQHID----------NKKYYAVKVVRNIKK-YTRSAKIEADILKKIQNDDINNNNI-VKY  101 (360)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETT----------TCCEEEEEEECSCHH-HHHHHHHHHHHHHHTCCCSTTGGGB-CCE
T ss_pred             cCEEEEEEEEcccCCeEEEEEEECC----------CCeEEEEEEeccchh-hhhhhHHHHHHHHHhcccCCCCCCe-ecc
Confidence            4589999999999999999999977          789999999874321 1234567999999997     6664 455


Q ss_pred             EEEeeeCCEEEEEEecCCCCHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCC------
Q 005221          213 HFKGRQGDYYVMVMDMLGPSLWDVWNNNS-HTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGT------  285 (708)
Q Consensus       213 ~~~~~~~~~~~lvme~~ggsL~~~l~~~~-~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~------  285 (708)
                      ..++...+.++||||+++++|.+++.... ..+++..++.++.||+.||.|||++|||||||||+||||+.+..      
T Consensus       102 ~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~~~  181 (360)
T 3llt_A          102 HGKFMYYDHMCLIFEPLGPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLIT  181 (360)
T ss_dssp             EEEEEETTEEEEEECCCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCTTCCEEEEE
T ss_pred             cceeeECCeeEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCcccEEEccccccccccc
Confidence            55567788999999999999999998754 35999999999999999999999999999999999999985210      


Q ss_pred             --------------CCCCcEEEeccCccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHH
Q 005221          286 --------------PDEKKLFLVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLI  351 (708)
Q Consensus       286 --------------~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~  351 (708)
                                    .....+||+|||+|+......           ...+||+.|+|||++.+..++.++|||||||+||
T Consensus       182 ~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~-----------~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~  250 (360)
T 3llt_A          182 VRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYH-----------GSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLA  250 (360)
T ss_dssp             EECTTTCCEEEEEEESCCCEEECCCTTCEETTSCC-----------CSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHH
T ss_pred             hhcccccccccccccCCCCEEEEeccCceecCCCC-----------cCccCcccccCcHHHcCCCCCCccchHHHHHHHH
Confidence                          013369999999998644322           2356999999999999999999999999999999


Q ss_pred             HHHhCCCCCCCCCCCCchhhhhhhccCCCCCCc-----------------cCCCCh---HHHHHHHHHHcCCCCCc-ccH
Q 005221          352 FLLRGRLPWQGYQGENKGFLVCKKKMATSPDGL-----------------CCFCPA---PFRQFVEYVVNLKFDEE-PNY  410 (708)
Q Consensus       352 eLltG~~Pf~~~~~~~~~~~i~~~~~~~~p~~l-----------------~~~~p~---~~~~l~~~~~~~~~~~r-P~~  410 (708)
                      +|++|++||.+.+..+....+.......++..+                 ....|.   ... .........+... ...
T Consensus       251 ell~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~  329 (360)
T 3llt_A          251 ELYTGSLLFRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSIN-SIKHVKKCLPLYKIIKH  329 (360)
T ss_dssp             HHHHSSCSCCCSSHHHHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHH-HHHHHHTCCCHHHHCCC
T ss_pred             HHHHCCCCCCCCcHHHHHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchh-hhhhhhhcccccccchH
Confidence            999999999986654443333332221111000                 000000   000 0000000000000 011


Q ss_pred             HHHHHHHHhhhCCCCCCCCcchHHHHhHHHH
Q 005221          411 AKYISLFDGIVGPNPDIRPISTEGAQKLIYQ  441 (708)
Q Consensus       411 ~~l~~LL~~mL~~dP~~Rps~~e~l~h~~f~  441 (708)
                      ..+.+||.+||..||++|||+.|+|+||||+
T Consensus       330 ~~l~~li~~~L~~dP~~Rpta~elL~hp~f~  360 (360)
T 3llt_A          330 ELFCDFLYSILQIDPTLRPSPAELLKHKFLE  360 (360)
T ss_dssp             HHHHHHHHHHCCSSGGGSCCHHHHTTSGGGC
T ss_pred             HHHHHHHHHHhcCChhhCCCHHHHhcCcccC
Confidence            5688999999999999999999999999984


No 62 
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00  E-value=1.5e-43  Score=379.45  Aligned_cols=256  Identities=21%  Similarity=0.268  Sum_probs=198.7

Q ss_pred             CCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCC----CCCCCCChHHHHHHHHcCCCCCccEEEE
Q 005221          139 PMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSS----KGCNYGPPYEWQVYNTLGGSHGVPRVHF  214 (708)
Q Consensus       139 ~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~----~~~~~~~~~Ei~il~~L~h~~~v~~~~~  214 (708)
                      ++|++++.||+|+||.||+|++...       ..+++.||+|++++..    ......+.+|+.+|+.|+|+|++..+..
T Consensus        17 ~~y~~~~~lG~G~~g~V~~~~~~~~-------~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~   89 (327)
T 3a62_A           17 ECFELLRVLGKGGYGKVFQVRKVTG-------ANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYA   89 (327)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEECSS-------TTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEE
T ss_pred             HHeEEEEEEEeCCCEEEEEEEEecc-------CCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEE
Confidence            4799999999999999999998531       1268899999987642    2223457789999999999886666554


Q ss_pred             EeeeCCEEEEEEecC-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcEEE
Q 005221          215 KGRQGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFL  293 (708)
Q Consensus       215 ~~~~~~~~~lvme~~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~vkL  293 (708)
                       +..++.+||||||+ |++|.+++...+ .+++..++.++.||+.||.|||++||+||||||+||||+.++     .+||
T Consensus        90 -~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~Nill~~~~-----~~kl  162 (327)
T 3a62_A           90 -FQTGGKLYLILEYLSGGELFMQLEREG-IFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQG-----HVKL  162 (327)
T ss_dssp             -EECSSCEEEEEECCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTS-----CEEE
T ss_pred             -EEcCCEEEEEEeCCCCCcHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHhCCEEcccCCHHHeEECCCC-----cEEE
Confidence             46678899999999 899999998765 699999999999999999999999999999999999999877     5999


Q ss_pred             eccCccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCchhhhh
Q 005221          294 VDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVC  373 (708)
Q Consensus       294 ~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLltG~~Pf~~~~~~~~~~~i~  373 (708)
                      +|||+++.......        .....+||+.|+|||++.+..++.++|||||||+||+|++|++||.+.+.......+.
T Consensus       163 ~Dfg~~~~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~  234 (327)
T 3a62_A          163 TDFGLCKESIHDGT--------VTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKIL  234 (327)
T ss_dssp             CCCSCC------------------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHH
T ss_pred             EeCCcccccccCCc--------cccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHHHHHHHH
Confidence            99999986443221        1124579999999999999999999999999999999999999998765433333333


Q ss_pred             hhccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCC-----cchHHHHhHHHHh
Q 005221          374 KKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRP-----ISTEGAQKLIYQV  442 (708)
Q Consensus       374 ~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rp-----s~~e~l~h~~f~~  442 (708)
                      ......     +..+                     ...+.+||.+||..||++||     ++.|+++||||..
T Consensus       235 ~~~~~~-----p~~~---------------------~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~hp~f~~  282 (327)
T 3a62_A          235 KCKLNL-----PPYL---------------------TQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRH  282 (327)
T ss_dssp             HTCCCC-----CTTS---------------------CHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHSGGGSS
T ss_pred             hCCCCC-----CCCC---------------------CHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcCCcccC
Confidence            222111     1111                     14789999999999999999     7889999999864


No 63 
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00  E-value=7.9e-44  Score=397.94  Aligned_cols=254  Identities=21%  Similarity=0.209  Sum_probs=200.6

Q ss_pred             CCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecC---CCCCCCCChHHHHHHHHcCCCCCccEEEEE
Q 005221          139 PMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRS---SKGCNYGPPYEWQVYNTLGGSHGVPRVHFK  215 (708)
Q Consensus       139 ~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~---~~~~~~~~~~Ei~il~~L~h~~~v~~~~~~  215 (708)
                      ++|++++.||+|+||.||+|++..          +++.||||++...   .......+.+|+.+|+.++|+|++..+. +
T Consensus       148 ~~y~~~~~lG~G~~g~V~~~~~~~----------~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~-~  216 (446)
T 4ejn_A          148 NEFEYLKLLGKGTFGKVILVKEKA----------TGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKY-S  216 (446)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETT----------TCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEE-E
T ss_pred             HHcEEeEEEeeCcCEEEEEEEEcC----------CCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEE-E
Confidence            579999999999999999999987          7899999999864   3333456778999999999988665554 4


Q ss_pred             eeeCCEEEEEEecC-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHh-CCceecCCCCCcEEeCCCCCCCCCcEEE
Q 005221          216 GRQGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHS-KGYVHGDVKPENFLLGPPGTPDEKKLFL  293 (708)
Q Consensus       216 ~~~~~~~~lvme~~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~-~gIvHrDIKP~NILl~~~g~~~~~~vkL  293 (708)
                      +...+.++|||||+ |++|.+++.... .+++..++.++.||+.||+|||+ +|||||||||+||||+.++     .+||
T Consensus       217 ~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~giiHrDlkp~NIll~~~~-----~~kl  290 (446)
T 4ejn_A          217 FQTHDRLCFVMEYANGGELFFHLSRER-VFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDG-----HIKI  290 (446)
T ss_dssp             EEETTEEEEEECCCSSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCGGGEEECSSS-----CEEE
T ss_pred             EeeCCEEEEEEeeCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHhhcCCEEECCCCHHHEEECCCC-----CEEE
Confidence            57778899999999 889999987765 69999999999999999999998 9999999999999999877     5999


Q ss_pred             eccCccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCchhhhh
Q 005221          294 VDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVC  373 (708)
Q Consensus       294 ~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLltG~~Pf~~~~~~~~~~~i~  373 (708)
                      +|||+|+.......        .....+||+.|+|||++.+..++.++|||||||+||+|++|++||.+.+.......+.
T Consensus       291 ~DFG~a~~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~  362 (446)
T 4ejn_A          291 TDFGLCKEGIKDGA--------TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELIL  362 (446)
T ss_dssp             CCCCCCCTTCC-------------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH
T ss_pred             ccCCCceeccCCCc--------ccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHH
Confidence            99999986433221        1234679999999999999999999999999999999999999998765443333333


Q ss_pred             hhccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCC-----cchHHHHhHHHHhc
Q 005221          374 KKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRP-----ISTEGAQKLIYQVG  443 (708)
Q Consensus       374 ~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rp-----s~~e~l~h~~f~~~  443 (708)
                      ......     +..+                     ...+.+||.+||..||.+||     ++.|+++||||...
T Consensus       363 ~~~~~~-----p~~~---------------------~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~hp~f~~~  411 (446)
T 4ejn_A          363 MEEIRF-----PRTL---------------------GPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGI  411 (446)
T ss_dssp             HCCCCC-----CTTS---------------------CHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTTC
T ss_pred             hCCCCC-----CccC---------------------CHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhCccccCC
Confidence            322111     1111                     14789999999999999999     99999999999754


No 64 
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00  E-value=1.2e-43  Score=395.07  Aligned_cols=292  Identities=17%  Similarity=0.175  Sum_probs=209.6

Q ss_pred             CCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCC--CCCCChHHHHHHHHcCCCCCccEEEEE
Q 005221          138 SPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKG--CNYGPPYEWQVYNTLGGSHGVPRVHFK  215 (708)
Q Consensus       138 ~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~--~~~~~~~Ei~il~~L~h~~~v~~~~~~  215 (708)
                      .++|++++.||+|+||.||+|++..          +++.||||++......  ....+.+|+.+|+.|+|+|+|..+..+
T Consensus        25 ~~~y~~~~~lG~G~~g~V~~a~~~~----------~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~   94 (432)
T 3n9x_A           25 PDNYIIKHLIGRGSYGYVYLAYDKN----------TEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLI   94 (432)
T ss_dssp             CTTEEEEEEEEEETTEEEEEEEETT----------TTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEEC
T ss_pred             cCCEEEEEEEeecCCEEEEEEEECC----------CCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEE
Confidence            4589999999999999999999987          7899999999754221  123567899999999999977777666


Q ss_pred             eeeC----CEEEEEEecCCCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcE
Q 005221          216 GRQG----DYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKL  291 (708)
Q Consensus       216 ~~~~----~~~~lvme~~ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~v  291 (708)
                      ....    ..+|||||+++++|.+++.... .+++..++.++.||+.||.|||++|||||||||+||||+.++     .+
T Consensus        95 ~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~-~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~-----~~  168 (432)
T 3n9x_A           95 IPDDLLKFDELYIVLEIADSDLKKLFKTPI-FLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLNQDC-----SV  168 (432)
T ss_dssp             CCSCTTTCCCEEEEEECCSEEHHHHHHSSC-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTC-----CE
T ss_pred             ecCCCCcCCeEEEEEecCCcCHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHeEECCCC-----CE
Confidence            4433    6799999999999999998754 699999999999999999999999999999999999999887     59


Q ss_pred             EEeccCccccccCCCCCccc--------------cccCCCceeeccccccchhhh-cCCCCCchhhHHHHHHHHHHHHhC
Q 005221          292 FLVDLGLATKWRDSTTGMHV--------------EYDQRPDVFRGTVRYASVHAH-LGRTGSRRDDLESLAYTLIFLLRG  356 (708)
Q Consensus       292 kL~DFGla~~~~~~~~~~~~--------------~~~~~~~~~~GT~~Y~APE~~-~~~~~s~~~DIwSlGviL~eLltG  356 (708)
                      ||+|||+|+...........              .........+||+.|+|||++ .+..++.++|||||||+||||++|
T Consensus       169 kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g  248 (432)
T 3n9x_A          169 KVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNM  248 (432)
T ss_dssp             EECCCTTCEEC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTT
T ss_pred             EEccCCCcccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhc
Confidence            99999999976543221000              000122457899999999986 556799999999999999999985


Q ss_pred             CCC-----------CCCCCC-----------------CCchhhhhhhccCCCCCCccCCCChHHHHHHHHHHcCCCCCc-
Q 005221          357 RLP-----------WQGYQG-----------------ENKGFLVCKKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEE-  407 (708)
Q Consensus       357 ~~P-----------f~~~~~-----------------~~~~~~i~~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~r-  407 (708)
                      ..|           |.+.+.                 .+....+......+..+.+..........++.......+... 
T Consensus       249 ~~p~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~ql~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  328 (432)
T 3n9x_A          249 LQSHINDPTNRFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLK  328 (432)
T ss_dssp             CTTTCSSGGGCCCSCCCSCSCC----------CHHHHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHH
T ss_pred             ccccccccccccccCCCccccccCcccccccccccchHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCCCCCCCCHH
Confidence            444           443321                 111122222222222222222223333333322211111100 


Q ss_pred             ---cc-HHHHHHHHHhhhCCCCCCCCcchHHHHhHHHHhccc
Q 005221          408 ---PN-YAKYISLFDGIVGPNPDIRPISTEGAQKLIYQVGHK  445 (708)
Q Consensus       408 ---P~-~~~l~~LL~~mL~~dP~~Rps~~e~l~h~~f~~~~~  445 (708)
                         |. ...+++||.+||..||++|||+.|+|+||||.....
T Consensus       329 ~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~~  370 (432)
T 3n9x_A          329 QKYPSISDDGINLLESMLKFNPNKRITIDQALDHPYLKDVRK  370 (432)
T ss_dssp             HHSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTCGGGTTTCC
T ss_pred             HHCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcChhhhhccC
Confidence               11 357899999999999999999999999999987654


No 65 
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00  E-value=1.9e-43  Score=381.98  Aligned_cols=262  Identities=16%  Similarity=0.173  Sum_probs=203.9

Q ss_pred             CCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCC---CCCCChHHHHHHHHc-CCCCCccEEEE
Q 005221          139 PMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKG---CNYGPPYEWQVYNTL-GGSHGVPRVHF  214 (708)
Q Consensus       139 ~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~---~~~~~~~Ei~il~~L-~h~~~v~~~~~  214 (708)
                      ++|++++.||+|+||.||+|++..          +++.||||++.+....   ....+.+|+.++.++ +|+| |+.++.
T Consensus         9 ~~y~~~~~lG~G~fg~V~~~~~~~----------~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~-iv~l~~   77 (345)
T 3a8x_A            9 QDFDLLRVIGRGSYAKVLLVRLKK----------TDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPF-LVGLHS   77 (345)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETT----------TTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTT-BCCEEE
T ss_pred             hheEEEEEEEecCCeEEEEEEECC----------CCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCc-cCeEEE
Confidence            479999999999999999999977          7899999999865321   122356799999998 5666 555555


Q ss_pred             EeeeCCEEEEEEecC-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcEEE
Q 005221          215 KGRQGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFL  293 (708)
Q Consensus       215 ~~~~~~~~~lvme~~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~vkL  293 (708)
                      ++...+.+||||||+ |++|.+++...+ .+++..++.++.||+.||+|||++||+||||||+||||+.++     .+||
T Consensus        78 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g-----~~kL  151 (345)
T 3a8x_A           78 CFQTESRLFFVIEYVNGGDLMFHMQRQR-KLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEG-----HIKL  151 (345)
T ss_dssp             EEECSSEEEEEECCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTS-----CEEE
T ss_pred             EEEeCCEEEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCC-----CEEE
Confidence            667788999999999 899999998764 699999999999999999999999999999999999999877     5999


Q ss_pred             eccCccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCchhhhh
Q 005221          294 VDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVC  373 (708)
Q Consensus       294 ~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLltG~~Pf~~~~~~~~~~~i~  373 (708)
                      +|||+++.......        .....+||+.|+|||++.+..++.++|||||||+||+|++|++||...........  
T Consensus       152 ~DFG~a~~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~--  221 (345)
T 3a8x_A          152 TDYGMCKEGLRPGD--------TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQ--  221 (345)
T ss_dssp             CCGGGCBCSCCTTC--------CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC--------
T ss_pred             EeccccccccCCCC--------cccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCccccccccc--
Confidence            99999986433211        12346799999999999999999999999999999999999999975322110000  


Q ss_pred             hhccCCCCCCccCCCChHHHHHHHHHHcCCCCCcc-cHHHHHHHHHhhhCCCCCCCCcc------hHHHHhHHHHhc
Q 005221          374 KKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEP-NYAKYISLFDGIVGPNPDIRPIS------TEGAQKLIYQVG  443 (708)
Q Consensus       374 ~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP-~~~~l~~LL~~mL~~dP~~Rps~------~e~l~h~~f~~~  443 (708)
                                      .....+...+....+.-.+ -...+.+||.+||..||.+||++      .|++.||||...
T Consensus       222 ----------------~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~hp~f~~~  282 (345)
T 3a8x_A          222 ----------------NTEDYLFQVILEKQIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNV  282 (345)
T ss_dssp             -----------------CHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTSGGGTTC
T ss_pred             ----------------ccHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcCCccCCC
Confidence                            0000111111111111101 12578999999999999999996      799999999653


No 66 
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00  E-value=8.6e-43  Score=365.80  Aligned_cols=262  Identities=39%  Similarity=0.669  Sum_probs=207.8

Q ss_pred             CCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCCCCCCChHHHHHHHHcCCCCCccEEEEEee
Q 005221          138 SPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNTLGGSHGVPRVHFKGR  217 (708)
Q Consensus       138 ~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~~~~~~~~Ei~il~~L~h~~~v~~~~~~~~  217 (708)
                      .++|++.+.||+|+||.||+|++..          +++.||||++.....  ...+.+|+.+++.++|++++..+..++.
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~----------~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~   75 (296)
T 4hgt_A            8 GNRYRLGRKIGSGSFGDIYLGTDIA----------AGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGA   75 (296)
T ss_dssp             ---CEEEEEEEECSSSEEEEEEETT----------TTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEE
T ss_pred             CCceEEeeeecCCCCeEEEEEEEcC----------CCceEEEEeeccccc--chHHHHHHHHHHHhcCCCCCCeeeeecC
Confidence            4589999999999999999999877          789999998765533  3468899999999999999999999999


Q ss_pred             eCCEEEEEEecCCCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEe---CCCCCCCCCcEEEe
Q 005221          218 QGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLL---GPPGTPDEKKLFLV  294 (708)
Q Consensus       218 ~~~~~~lvme~~ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl---~~~g~~~~~~vkL~  294 (708)
                      .++..++|||+++++|.+++......+++..++.++.||+.||.|||++||+||||||+|||+   +.++     .+||+
T Consensus        76 ~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~~-----~~kL~  150 (296)
T 4hgt_A           76 EGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGN-----LVYII  150 (296)
T ss_dssp             ETTEEEEEEECCCCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECCGGGTT-----CEEEC
T ss_pred             CCCceEEEEEccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeeeeccCCCC-----eEEEe
Confidence            999999999999999999998766679999999999999999999999999999999999999   4444     69999


Q ss_pred             ccCccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCchhh---
Q 005221          295 DLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFL---  371 (708)
Q Consensus       295 DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLltG~~Pf~~~~~~~~~~~---  371 (708)
                      |||+++............+ .......||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.........   
T Consensus       151 Dfg~a~~~~~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~  229 (296)
T 4hgt_A          151 DFGLAKKYRDARTHQHIPY-RENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYER  229 (296)
T ss_dssp             CCTTCEECBCTTTCCBCCC-CCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHH
T ss_pred             cCccceeccCcccCccCCC-CcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhh
Confidence            9999998766544332221 223456799999999999999999999999999999999999999987654432222   


Q ss_pred             hhhhccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhH
Q 005221          372 VCKKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKL  438 (708)
Q Consensus       372 i~~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~  438 (708)
                      +...........++..+|                     ..+.+||.+||..||++||++.++++..
T Consensus       230 ~~~~~~~~~~~~~~~~~~---------------------~~l~~li~~~l~~~p~~Rpt~~~l~~~l  275 (296)
T 4hgt_A          230 ISEKKMSTPIEVLCKGYP---------------------SEFATYLNFCRSLRFDDKPDYSYLRQLF  275 (296)
T ss_dssp             HHHHHHHSCHHHHTTTSC---------------------HHHHHHHHHHHTSCTTCCCCHHHHHHHH
T ss_pred             hhcccccchhhhhhccCC---------------------HHHHHHHHHHHhcCCCCCCCHHHHHHHH
Confidence            222222221111222223                     3677778888888888888887776653


No 67 
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00  E-value=4.6e-43  Score=366.28  Aligned_cols=263  Identities=21%  Similarity=0.190  Sum_probs=212.0

Q ss_pred             CCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCC--CCCCChHHHHHHHHcCCCCCccEEEEE
Q 005221          138 SPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKG--CNYGPPYEWQVYNTLGGSHGVPRVHFK  215 (708)
Q Consensus       138 ~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~--~~~~~~~Ei~il~~L~h~~~v~~~~~~  215 (708)
                      .++|++++.||+|+||.||+|.+..          +++.||+|++......  ....+.+|+.+++.|+|+|++..+.. 
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~----------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~-   73 (284)
T 3kk8_A            5 SDNYDVKEELGKGAFSVVRRCVHKT----------TGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS-   73 (284)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETT----------TCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEE-
T ss_pred             hhhhhhhhhhcCcCCeEEEEEEEcC----------CCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEE-
Confidence            4589999999999999999999977          7899999998765321  12346789999999999886665554 


Q ss_pred             eeeCCEEEEEEecC-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcEEEe
Q 005221          216 GRQGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLV  294 (708)
Q Consensus       216 ~~~~~~~~lvme~~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~vkL~  294 (708)
                      ...++..++|||++ +++|.+.+.... .+++..+..++.||+.||.|||++||+||||||+|||++.++  ....+||+
T Consensus        74 ~~~~~~~~~v~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~--~~~~~kl~  150 (284)
T 3kk8_A           74 IQEESFHYLVFDLVTGGELFEDIVARE-FYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKA--KGAAVKLA  150 (284)
T ss_dssp             EECSSEEEEEECCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSS--TTCCEEEC
T ss_pred             EEcCCEEEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCcCcCCCCHHHEEEecCC--CCCcEEEe
Confidence            57788899999999 889999887764 699999999999999999999999999999999999998765  23369999


Q ss_pred             ccCccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhh
Q 005221          295 DLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCK  374 (708)
Q Consensus       295 DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLltG~~Pf~~~~~~~~~~~i~~  374 (708)
                      |||++.........         ....||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.........+..
T Consensus       151 Dfg~~~~~~~~~~~---------~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~  221 (284)
T 3kk8_A          151 DFGLAIEVNDSEAW---------HGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKA  221 (284)
T ss_dssp             CCTTCEECCSSCBC---------CCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH
T ss_pred             eceeeEEcccCccc---------cCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhHHHHHHHh
Confidence            99999876543321         235699999999999999999999999999999999999999987654443333333


Q ss_pred             hccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhHHHHhccc
Q 005221          375 KKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKLIYQVGHK  445 (708)
Q Consensus       375 ~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~~f~~~~~  445 (708)
                      .........+ ..+                     ...+.+||.+||..||++|||+.|+++||||.....
T Consensus       222 ~~~~~~~~~~-~~~---------------------~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~~  270 (284)
T 3kk8_A          222 GAYDYPSPEW-DTV---------------------TPEAKSLIDSMLTVNPKKRITADQALKVPWICNRER  270 (284)
T ss_dssp             TCCCCCTTTT-TTS---------------------CHHHHHHHHHHSCSSTTTSCCHHHHTTSHHHHSCCC
T ss_pred             ccccCCchhh-ccc---------------------CHHHHHHHHHHcccChhhCCCHHHHhcCccccCChh
Confidence            3222211110 111                     147889999999999999999999999999976543


No 68 
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00  E-value=2.3e-43  Score=383.43  Aligned_cols=286  Identities=17%  Similarity=0.167  Sum_probs=219.8

Q ss_pred             CCCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCC-CCCCChHHHHHHHHcCCCCCccEEEEE
Q 005221          137 GSPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKG-CNYGPPYEWQVYNTLGGSHGVPRVHFK  215 (708)
Q Consensus       137 ~~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~-~~~~~~~Ei~il~~L~h~~~v~~~~~~  215 (708)
                      ..++|++++.||+|+||.||+|++..          +++.||||++...... ....+.+|+.+|..|+|+|++..+..+
T Consensus        25 ~~~~y~~~~~lG~G~~g~V~~~~~~~----------~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~   94 (364)
T 3qyz_A           25 VGPRYTNLSYIGEGAYGMVCSAYDNL----------NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII   94 (364)
T ss_dssp             CTTTEEEEEEEEECSSEEEEEEEETT----------TTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEE
T ss_pred             ccccEEEEEEeecCCCeEEEEEEECC----------CCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEE
Confidence            34689999999999999999999977          7899999998754221 123567899999999999988777766


Q ss_pred             eeeC----CEEEEEEecCCCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcE
Q 005221          216 GRQG----DYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKL  291 (708)
Q Consensus       216 ~~~~----~~~~lvme~~ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~v  291 (708)
                      ....    ..+++|||+++++|.+++...  .+++..++.|+.||+.||.|||++||+||||||+||||+.++     .+
T Consensus        95 ~~~~~~~~~~~~iv~e~~~~~L~~~l~~~--~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~-----~~  167 (364)
T 3qyz_A           95 RAPTIEQMKDVYIVQDLMETDLYKLLKTQ--HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC-----DL  167 (364)
T ss_dssp             CCSSTTTCCCEEEEEECCSEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTC-----CE
T ss_pred             ecCCccccceEEEEEcccCcCHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChHhEEECCCC-----CE
Confidence            4332    578999999999999999764  599999999999999999999999999999999999998877     59


Q ss_pred             EEeccCccccccCCCCCccccccCCCceeeccccccchhhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCchh
Q 005221          292 FLVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLG-RTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGF  370 (708)
Q Consensus       292 kL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~-~~~s~~~DIwSlGviL~eLltG~~Pf~~~~~~~~~~  370 (708)
                      ||+|||+++.........     ......+||+.|+|||++.+ ..++.++|||||||+||+|++|++||.+.+..+...
T Consensus       168 kl~Dfg~a~~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~  242 (364)
T 3qyz_A          168 KICDFGLARVADPDHDHT-----GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLN  242 (364)
T ss_dssp             EECCCTTCEECCGGGCBC-----CTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHH
T ss_pred             EEEeCcceEecCCCCCcc-----ccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHH
Confidence            999999998765432211     11234679999999998765 458999999999999999999999999887776666


Q ss_pred             hhhhhccCCCCCCccCCCChHHHHHHHHHHcCCCCC----cc-cHHHHHHHHHhhhCCCCCCCCcchHHHHhHHHHhcc
Q 005221          371 LVCKKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDE----EP-NYAKYISLFDGIVGPNPDIRPISTEGAQKLIYQVGH  444 (708)
Q Consensus       371 ~i~~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~----rP-~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~~f~~~~  444 (708)
                      .+......+..+.+..........+...........    .+ -...+.+||.+||..||++|||+.|+|+||||....
T Consensus       243 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~  321 (364)
T 3qyz_A          243 HILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYY  321 (364)
T ss_dssp             HHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTTC
T ss_pred             HHHHHhCCCCHHHHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhhcc
Confidence            665544444333333322222222221111110000    01 125789999999999999999999999999997653


No 69 
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00  E-value=1.8e-42  Score=363.74  Aligned_cols=265  Identities=39%  Similarity=0.662  Sum_probs=210.9

Q ss_pred             CCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCCCCCCChHHHHHHHHcCCCCCccEEEEEee
Q 005221          138 SPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNTLGGSHGVPRVHFKGR  217 (708)
Q Consensus       138 ~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~~~~~~~~Ei~il~~L~h~~~v~~~~~~~~  217 (708)
                      .++|++++.||+|+||.||+|++..          +++.||||++.....  ...+.+|+.+++.|+|+++++.+..+..
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~----------~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~   75 (296)
T 3uzp_A            8 GNRYRLGRKIGSGSFGDIYLGTDIA----------AGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGA   75 (296)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETT----------TTEEEEEEEEESCSS--CCHHHHHHHHHHHHTTSTTCCCEEEEEE
T ss_pred             ccEEEEEEEEccCCCeEEEEEEEcC----------CCcEEEEEEecCCcc--hhHHHHHHHHHHHhhcCCCCCccccccC
Confidence            3589999999999999999999877          789999999876533  3457899999999999999999999999


Q ss_pred             eCCEEEEEEecCCCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcEEEeccC
Q 005221          218 QGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLG  297 (708)
Q Consensus       218 ~~~~~~lvme~~ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~vkL~DFG  297 (708)
                      .++..++|||+++++|.+++......+++..++.++.||+.||.|||++||+||||||+|||++...  ....+||+|||
T Consensus        76 ~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~--~~~~~kl~Dfg  153 (296)
T 3uzp_A           76 EGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGK--KGNLVYIIDFG  153 (296)
T ss_dssp             ETTEEEEEEECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGG--GTTCEEECCCT
T ss_pred             CCCceEEEEEecCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHeEEecCC--CCCeEEEeeCC
Confidence            9999999999999999999986666899999999999999999999999999999999999995211  12269999999


Q ss_pred             ccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCc---hhhhhh
Q 005221          298 LATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENK---GFLVCK  374 (708)
Q Consensus       298 la~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLltG~~Pf~~~~~~~~---~~~i~~  374 (708)
                      +++............+ ......+||+.|+|||++.+..++.++|||||||+||+|++|+.||.+......   ...+..
T Consensus       154 ~~~~~~~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~  232 (296)
T 3uzp_A          154 LAKKYRDARTHQHIPY-RENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISE  232 (296)
T ss_dssp             TCEECBCTTTCCBCCC-CCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHH
T ss_pred             Cccccccccccccccc-ccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcc
Confidence            9998766543322111 123456799999999999999999999999999999999999999987544322   222222


Q ss_pred             hccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhH
Q 005221          375 KKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKL  438 (708)
Q Consensus       375 ~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~  438 (708)
                      .........++..+|                     ..+.+|+.+||..||++||++.++++..
T Consensus       233 ~~~~~~~~~~~~~~~---------------------~~l~~li~~~l~~dp~~Rps~~~l~~~l  275 (296)
T 3uzp_A          233 KKMSTPIEVLCKGYP---------------------SEFATYLNFCRSLRFDDKPDYSYLRQLF  275 (296)
T ss_dssp             HHHHSCHHHHTTTSC---------------------HHHHHHHHHHHTSCTTCCCCHHHHHHHH
T ss_pred             cccCCchHHHHhhCC---------------------HHHHHHHHHHHhcCcCcCCCHHHHHHHH
Confidence            222222111222222                     4677888888888888888888776653


No 70 
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00  E-value=3.5e-43  Score=389.74  Aligned_cols=259  Identities=19%  Similarity=0.248  Sum_probs=199.5

Q ss_pred             CCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCC--------CCCCCCChHHHHHHHHcCCCCCcc
Q 005221          139 PMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSS--------KGCNYGPPYEWQVYNTLGGSHGVP  210 (708)
Q Consensus       139 ~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~--------~~~~~~~~~Ei~il~~L~h~~~v~  210 (708)
                      ++|.+.+.||+|+||.||+|++..          +++.||||++....        ......+.+|+.+|++|+|+|++.
T Consensus       135 ~~y~~~~~LG~G~~g~V~~a~~~~----------~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~  204 (419)
T 3i6u_A          135 DEYIMSKTLGSGACGEVKLAFERK----------TCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIK  204 (419)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETT----------TCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCC
T ss_pred             ccEEEEeEEeeCCCeEEEEEEECC----------CCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEee
Confidence            579999999999999999999987          78999999987642        112335789999999999999877


Q ss_pred             EEEEEeeeCCEEEEEEecC-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCC
Q 005221          211 RVHFKGRQGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEK  289 (708)
Q Consensus       211 ~~~~~~~~~~~~~lvme~~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~  289 (708)
                      .+..+  ..+.++|||||+ +++|.+++...+ .+++..++.++.||+.||.|||++||+||||||+||||+..+  ...
T Consensus       205 l~~~~--~~~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~--~~~  279 (419)
T 3i6u_A          205 IKNFF--DAEDYYIVLELMEGGELFDKVVGNK-RLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQE--EDC  279 (419)
T ss_dssp             CCEEE--ESSEEEEEEECCTTCBGGGGTSSSC-CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSS--SSC
T ss_pred             EEEEE--ecCceEEEEEcCCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCC--Ccc
Confidence            66654  345588999999 889999887654 699999999999999999999999999999999999997655  234


Q ss_pred             cEEEeccCccccccCCCCCccccccCCCceeeccccccchhhhcC---CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCC
Q 005221          290 KLFLVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLG---RTGSRRDDLESLAYTLIFLLRGRLPWQGYQGE  366 (708)
Q Consensus       290 ~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~---~~~s~~~DIwSlGviL~eLltG~~Pf~~~~~~  366 (708)
                      .+||+|||+|+.......         ....+||+.|+|||++.+   ..++.++|||||||+||+|++|++||.+....
T Consensus       280 ~~kl~DFG~a~~~~~~~~---------~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~  350 (419)
T 3i6u_A          280 LIKITDFGHSKILGETSL---------MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQ  350 (419)
T ss_dssp             CEEECCSSTTTSCC--------------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSS
T ss_pred             eEEEeecccceecCCCcc---------ccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcch
Confidence            699999999987654321         224679999999999864   56889999999999999999999999876544


Q ss_pred             Cchhh-hhhhccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhHHHHhc
Q 005221          367 NKGFL-VCKKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKLIYQVG  443 (708)
Q Consensus       367 ~~~~~-i~~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~~f~~~  443 (708)
                      ..... +........+.. ...+                     ...+.+||.+||..||++||++.|+|+||||+..
T Consensus       351 ~~~~~~i~~~~~~~~~~~-~~~~---------------------~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~~~~  406 (419)
T 3i6u_A          351 VSLKDQITSGKYNFIPEV-WAEV---------------------SEKALDLVKKLLVVDPKARFTTEEALRHPWLQDE  406 (419)
T ss_dssp             CCHHHHHHTTCCCCCHHH-HTTS---------------------CHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGCCH
T ss_pred             HHHHHHHhcCCCCCCchh-hccc---------------------CHHHHHHHHHHccCChhHCcCHHHHhCCcccCCh
Confidence            33222 222211111100 0001                     2578999999999999999999999999998643


No 71 
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00  E-value=2.9e-43  Score=384.52  Aligned_cols=256  Identities=21%  Similarity=0.242  Sum_probs=200.4

Q ss_pred             CCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCC---CCCCCChHHHHH-HHHcCCCCCccEEE
Q 005221          138 SPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSK---GCNYGPPYEWQV-YNTLGGSHGVPRVH  213 (708)
Q Consensus       138 ~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~---~~~~~~~~Ei~i-l~~L~h~~~v~~~~  213 (708)
                      .++|++++.||+|+||.||+|++..          +++.||||++.+...   .....+..|..+ ++.++|++++. ++
T Consensus        37 ~~~y~~~~~lG~G~fg~V~~~~~~~----------~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~-l~  105 (373)
T 2r5t_A           37 PSDFHFLKVIGKGSFGKVLLARHKA----------EEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVG-LH  105 (373)
T ss_dssp             GGGEEEEEEEECCTTCEEEEEEETT----------TCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCC-EE
T ss_pred             hhheEEEEEEeeCCCeEEEEEEEcC----------CCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCC-EE
Confidence            3479999999999999999999987          789999999986532   223345567776 46678877555 55


Q ss_pred             EEeeeCCEEEEEEecC-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcEE
Q 005221          214 FKGRQGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLF  292 (708)
Q Consensus       214 ~~~~~~~~~~lvme~~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~vk  292 (708)
                      .++...+.+||||||+ ||+|.+++.+.+ .+++..++.++.||+.||+|||++|||||||||+||||+.++     .+|
T Consensus       106 ~~~~~~~~~~lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g-----~ik  179 (373)
T 2r5t_A          106 FSFQTADKLYFVLDYINGGELFYHLQRER-CFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQG-----HIV  179 (373)
T ss_dssp             EEEECSSEEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTS-----CEE
T ss_pred             EEEEeCCEEEEEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCC-----CEE
Confidence            5557788999999999 889999998764 699999999999999999999999999999999999999887     599


Q ss_pred             EeccCccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCchhhh
Q 005221          293 LVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLV  372 (708)
Q Consensus       293 L~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLltG~~Pf~~~~~~~~~~~i  372 (708)
                      |+|||+++.......        ....++||+.|+|||++.+..++.++|||||||+||||++|.+||.+.+..+....+
T Consensus       180 L~DFG~a~~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i  251 (373)
T 2r5t_A          180 LTDFGLCKENIEHNS--------TTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNI  251 (373)
T ss_dssp             ECCCCBCGGGBCCCC--------CCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHHHHHH
T ss_pred             EeeCccccccccCCC--------ccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHH
Confidence            999999986433221        223578999999999999999999999999999999999999999875543333333


Q ss_pred             hhhccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcc----hHHHHhHHHHhcc
Q 005221          373 CKKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPIS----TEGAQKLIYQVGH  444 (708)
Q Consensus       373 ~~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~----~e~l~h~~f~~~~  444 (708)
                      .......     +..+                     ...+.+||.+||..||.+||++    .+++.|+||....
T Consensus       252 ~~~~~~~-----~~~~---------------------~~~~~~li~~lL~~dp~~R~~~~~~~~~i~~h~~f~~~~  301 (373)
T 2r5t_A          252 LNKPLQL-----KPNI---------------------TNSARHLLEGLLQKDRTKRLGAKDDFMEIKSHVFFSLIN  301 (373)
T ss_dssp             HHSCCCC-----CSSS---------------------CHHHHHHHHHHTCSSGGGSTTTTTTHHHHHTSGGGTTCC
T ss_pred             HhcccCC-----CCCC---------------------CHHHHHHHHHHcccCHHhCCCCCCCHHHHhCCccccCCC
Confidence            3221111     1111                     1478999999999999999998    5899999997543


No 72 
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00  E-value=3.8e-43  Score=389.55  Aligned_cols=268  Identities=21%  Similarity=0.246  Sum_probs=208.0

Q ss_pred             CeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCCCCCCChHHHHHHHHcCCCCCccEEEEEeee-
Q 005221          140 MYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNTLGGSHGVPRVHFKGRQ-  218 (708)
Q Consensus       140 ~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~~~~~~~~Ei~il~~L~h~~~v~~~~~~~~~-  218 (708)
                      +|++++.||+|+||.||+|++..          +++.||||++....    ....+|+++|+.|+|+|+|..++.+... 
T Consensus        55 ~y~~~~~lG~G~fg~Vy~~~~~~----------~~~~vaiK~~~~~~----~~~~~E~~il~~l~hpniv~l~~~~~~~~  120 (420)
T 1j1b_A           55 SYTDTKVIGNGSFGVVYQAKLCD----------SGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIVRLRYFFYSSG  120 (420)
T ss_dssp             EEEEEEEEEECSSEEEEEEEETT----------TCCEEEEEEEECCT----TSCCHHHHHHHTCCCTTBCCEEEEEEEEE
T ss_pred             eEEeeeEEeeCCCEEEEEEEECC----------CCcEEEEEEecccc----hhHHHHHHHHHHcCCCCccceeeEEeccC
Confidence            69999999999999999999977          78999999987542    2356899999999999988887766432 


Q ss_pred             ----CCEEEEEEecCCCCHHHHHhc---cCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcE
Q 005221          219 ----GDYYVMVMDMLGPSLWDVWNN---NSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKL  291 (708)
Q Consensus       219 ----~~~~~lvme~~ggsL~~~l~~---~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~v  291 (708)
                          ..++++||||+.++|.+++..   ....+++..++.++.||+.||.|||++|||||||||+||||+.++.    .+
T Consensus       121 ~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NILl~~~~~----~~  196 (420)
T 1j1b_A          121 EKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTA----VL  196 (420)
T ss_dssp             TTTTEEEEEEEEECCCEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEEETTTT----EE
T ss_pred             CCCcceeEEeehhcccccHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEeCCCC----eE
Confidence                235789999998888887653   3457999999999999999999999999999999999999986542    68


Q ss_pred             EEeccCccccccCCCCCccccccCCCceeeccccccchhhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCchh
Q 005221          292 FLVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGR-TGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGF  370 (708)
Q Consensus       292 kL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~-~~s~~~DIwSlGviL~eLltG~~Pf~~~~~~~~~~  370 (708)
                      ||+|||+++.+......         ...+||+.|+|||++.+. .++.++|||||||+||||++|++||.+.+..+...
T Consensus       197 kl~DFG~a~~~~~~~~~---------~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~  267 (420)
T 1j1b_A          197 KLCDFGSAKQLVRGEPN---------VSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV  267 (420)
T ss_dssp             EECCCTTCEECCTTCCC---------CSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH
T ss_pred             EeccchhhhhcccCCCc---------eeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence            99999999876543221         235699999999999875 78999999999999999999999999876555544


Q ss_pred             hhhhhccCCCCCCc------------cCCCChHHHHHHHHHHcCCCCCcc-cHHHHHHHHHhhhCCCCCCCCcchHHHHh
Q 005221          371 LVCKKKMATSPDGL------------CCFCPAPFRQFVEYVVNLKFDEEP-NYAKYISLFDGIVGPNPDIRPISTEGAQK  437 (708)
Q Consensus       371 ~i~~~~~~~~p~~l------------~~~~p~~~~~l~~~~~~~~~~~rP-~~~~l~~LL~~mL~~dP~~Rps~~e~l~h  437 (708)
                      .+.+....+..+.+            +......+..+          -++ ....+++||.+||..||.+||++.|+++|
T Consensus       268 ~i~~~lg~p~~~~~~~~~~~~~~~~~p~~~~~~~~~~----------~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~h  337 (420)
T 1j1b_A          268 EIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKV----------FRPRTPPEAIALCSRLLEYTPTARLTPLEACAH  337 (420)
T ss_dssp             HHHHHHCSCCHHHHHHHCSCCCCCCCCCCCCCCHHHH----------SCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             HHHHHhCCCCHHHHHhhChhhhhhccCccCCCCHHHh----------cCCCCCHHHHHHHHHhccCChhHCCCHHHHhCC
Confidence            44443222111100            00000000000          001 12579999999999999999999999999


Q ss_pred             HHHHhcc
Q 005221          438 LIYQVGH  444 (708)
Q Consensus       438 ~~f~~~~  444 (708)
                      |||+...
T Consensus       338 p~f~~~~  344 (420)
T 1j1b_A          338 SFFDELR  344 (420)
T ss_dssp             GGGGGGG
T ss_pred             Hhhcccc
Confidence            9997543


No 73 
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00  E-value=3.6e-44  Score=390.83  Aligned_cols=279  Identities=16%  Similarity=0.201  Sum_probs=205.2

Q ss_pred             CCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCC--CCCCChHHHHHHHHcCCCCCccEEEEE
Q 005221          138 SPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKG--CNYGPPYEWQVYNTLGGSHGVPRVHFK  215 (708)
Q Consensus       138 ~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~--~~~~~~~Ei~il~~L~h~~~v~~~~~~  215 (708)
                      .++|++++.||+|+||.||+|++..          +++.||||++......  ....+.+|+.+|+.|+|+|++..+..+
T Consensus        28 ~~~y~~~~~lG~G~~g~V~~a~~~~----------~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~   97 (367)
T 2fst_X           28 PERYQNLSPVGSGAYGSVCAAFDTK----------TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVF   97 (367)
T ss_dssp             ETTEEEEEECC----CCEEEEEETT----------TTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEE
T ss_pred             CCceEEeeEEeecCCeEEEEEEECC----------CCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEE
Confidence            3689999999999999999999977          7899999998754221  123466899999999999988877776


Q ss_pred             eee-----CCEEEEEEecCCCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCc
Q 005221          216 GRQ-----GDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKK  290 (708)
Q Consensus       216 ~~~-----~~~~~lvme~~ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~  290 (708)
                      ...     ...+|+|||+++++|.+++..  ..+++..++.++.||+.||.|||++||+||||||+|||++.++     .
T Consensus        98 ~~~~~~~~~~~~~lv~e~~~~~L~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~-----~  170 (367)
T 2fst_X           98 TPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC-----E  170 (367)
T ss_dssp             CSCSSGGGCCCCEEEEECCCEECC-------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTC-----C
T ss_pred             ecCCccccCCeEEEEecccCCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHhhEEECCCC-----C
Confidence            432     356899999999999998876  3699999999999999999999999999999999999999877     5


Q ss_pred             EEEeccCccccccCCCCCccccccCCCceeeccccccchhhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCch
Q 005221          291 LFLVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLG-RTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKG  369 (708)
Q Consensus       291 vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~-~~~s~~~DIwSlGviL~eLltG~~Pf~~~~~~~~~  369 (708)
                      +||+|||+++......           ...+||+.|+|||++.+ ..++.++|||||||+||+|++|++||.+.+..+..
T Consensus       171 ~kL~DFG~a~~~~~~~-----------~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l  239 (367)
T 2fst_X          171 LKILDFGLARHTADEM-----------TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL  239 (367)
T ss_dssp             EEECC--------------------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHH
T ss_pred             EEEeeccccccccccC-----------CCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence            9999999998654321           23569999999999987 67899999999999999999999999987766666


Q ss_pred             hhhhhhccCCCCCCccCCCChHHHHHHHHHHcCCCCCcc-----cHHHHHHHHHhhhCCCCCCCCcchHHHHhHHHHhcc
Q 005221          370 FLVCKKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEP-----NYAKYISLFDGIVGPNPDIRPISTEGAQKLIYQVGH  444 (708)
Q Consensus       370 ~~i~~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP-----~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~~f~~~~  444 (708)
                      ..+......+..+.+..........++..+.......-+     ....+++||.+||..||.+|||+.|+|+||||....
T Consensus       240 ~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~hp~~~~~~  319 (367)
T 2fst_X          240 KLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH  319 (367)
T ss_dssp             HHHHHHHCSCCHHHHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTC
T ss_pred             HHHHHHhCCCCHHHHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcChhhhhcc
Confidence            666655554444444444444444444433222111100     125689999999999999999999999999997654


No 74 
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00  E-value=5.3e-43  Score=383.82  Aligned_cols=290  Identities=17%  Similarity=0.141  Sum_probs=211.0

Q ss_pred             CCCCeEEEEeEeee--CceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCC--CCCCCChHHHHHHHHcCCCCCccEE
Q 005221          137 GSPMYRLERKLGKG--GFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSK--GCNYGPPYEWQVYNTLGGSHGVPRV  212 (708)
Q Consensus       137 ~~~~Y~i~~~LG~G--~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~--~~~~~~~~Ei~il~~L~h~~~v~~~  212 (708)
                      ..++|+++++||+|  +||.||+|++..          +++.||||++.....  .....+.+|+.+++.|+|+|+|..+
T Consensus        23 ~~~~y~~~~~lG~G~~~~g~V~~~~~~~----------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~   92 (389)
T 3gni_B           23 EGGCYELLTVIGKGFEDLMTVNLARYKP----------TGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYR   92 (389)
T ss_dssp             CGGGEEEEEEEEEETTTTEEEEEEEETT----------TCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred             CCCcEEEEecccCCcCCceEEEEEEEcC----------CCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEe
Confidence            34589999999999  999999999987          789999999986532  1223466799999999999876655


Q ss_pred             EEEeeeCCEEEEEEecC-CCCHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCc
Q 005221          213 HFKGRQGDYYVMVMDML-GPSLWDVWNNN-SHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKK  290 (708)
Q Consensus       213 ~~~~~~~~~~~lvme~~-ggsL~~~l~~~-~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~  290 (708)
                      .. +..++.++|||||+ +++|.+++... ...+++..++.|+.||+.||.|||++|||||||||+||||+.++     .
T Consensus        93 ~~-~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~-----~  166 (389)
T 3gni_B           93 AT-FIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDG-----K  166 (389)
T ss_dssp             EE-EEETTEEEEEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTC-----C
T ss_pred             EE-EEECCEEEEEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCC-----C
Confidence            54 46788999999999 89999999765 34699999999999999999999999999999999999999877     5


Q ss_pred             EEEeccCccccccCCCCCccccccCCCceeeccccccchhhhcC--CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCc
Q 005221          291 LFLVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLG--RTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENK  368 (708)
Q Consensus       291 vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~--~~~s~~~DIwSlGviL~eLltG~~Pf~~~~~~~~  368 (708)
                      +||+|||++............ ....+...+||+.|+|||++.+  ..++.++|||||||+||+|++|++||.+......
T Consensus       167 ~kl~dfg~~~~~~~~~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~  245 (389)
T 3gni_B          167 VYLSGLRSNLSMISHGQRQRV-VHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQM  245 (389)
T ss_dssp             EEECCGGGCEECEETTEECSC-BCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTH
T ss_pred             EEEcccccceeeccccccccc-cccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHH
Confidence            999999998765443221111 1122334579999999999988  6789999999999999999999999998766554


Q ss_pred             hhhhhhhccCCCCCCccCCCCh--------------HHHHHHHHH----HcCCC----CCcccHHHHHHHHHhhhCCCCC
Q 005221          369 GFLVCKKKMATSPDGLCCFCPA--------------PFRQFVEYV----VNLKF----DEEPNYAKYISLFDGIVGPNPD  426 (708)
Q Consensus       369 ~~~i~~~~~~~~p~~l~~~~p~--------------~~~~l~~~~----~~~~~----~~rP~~~~l~~LL~~mL~~dP~  426 (708)
                      ...+............  ..+.              .+...+...    .....    ....-...+.+||.+||..||+
T Consensus       246 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~  323 (389)
T 3gni_B          246 LLEKLNGTVPCLLDTS--TIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPD  323 (389)
T ss_dssp             HHHC----------------------------------------------------------CCHHHHHHHHHHTCSCTT
T ss_pred             HHHHhcCCCCcccccc--ccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcc
Confidence            4433332221110000  0000              000000000    00000    0001125799999999999999


Q ss_pred             CCCcchHHHHhHHHHhccc
Q 005221          427 IRPISTEGAQKLIYQVGHK  445 (708)
Q Consensus       427 ~Rps~~e~l~h~~f~~~~~  445 (708)
                      +|||+.|+|+||||+....
T Consensus       324 ~Rpta~ell~hp~f~~~~~  342 (389)
T 3gni_B          324 ARPSASTLLNHSFFKQIKR  342 (389)
T ss_dssp             TSCCHHHHTTSGGGGGC--
T ss_pred             cCCCHHHHhcCHHHHHHhh
Confidence            9999999999999976543


No 75 
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00  E-value=2.1e-43  Score=385.63  Aligned_cols=260  Identities=18%  Similarity=0.168  Sum_probs=204.4

Q ss_pred             CeEE--EEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCCCCCCChHHHHHHHHcCCCCCccEEEEEee
Q 005221          140 MYRL--ERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNTLGGSHGVPRVHFKGR  217 (708)
Q Consensus       140 ~Y~i--~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~~~~~~~~Ei~il~~L~h~~~v~~~~~~~~  217 (708)
                      .|.+  .+.||+|+||.||+|++..          +++.||+|++..........+.+|+.+|++|+|+|+|..+.. +.
T Consensus        88 ~~~~~~~~~lG~G~~g~Vy~a~~~~----------~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~-~~  156 (373)
T 2x4f_A           88 FYTVSKTEILGGGRFGQVHKCEETA----------TGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDA-FE  156 (373)
T ss_dssp             TEEEEEEEECC-----CEEEEEETT----------TCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEE-EE
T ss_pred             ceeeecceEEecCcCEEEEEEEEcC----------CCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEE-EE
Confidence            3555  6789999999999999977          789999999987543334467899999999999886666554 46


Q ss_pred             eCCEEEEEEecC-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcEEEecc
Q 005221          218 QGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDL  296 (708)
Q Consensus       218 ~~~~~~lvme~~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~vkL~DF  296 (708)
                      ..+.++|||||+ +++|.+++......+++..++.++.||+.||.|||++||+||||||+|||++.++   ...+||+||
T Consensus       157 ~~~~~~lv~E~~~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~---~~~~kl~DF  233 (373)
T 2x4f_A          157 SKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRD---AKQIKIIDF  233 (373)
T ss_dssp             CSSEEEEEEECCTTCEEHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEETT---TTEEEECCC
T ss_pred             ECCEEEEEEeCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEecCC---CCcEEEEeC
Confidence            778899999999 8899999887666799999999999999999999999999999999999994221   126999999


Q ss_pred             CccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhhc
Q 005221          297 GLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCKKK  376 (708)
Q Consensus       297 Gla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLltG~~Pf~~~~~~~~~~~i~~~~  376 (708)
                      |+++.+.....         ....+||+.|+|||++.+..++.++|||||||+||+|++|+.||.+.+..+....+....
T Consensus       234 G~a~~~~~~~~---------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~  304 (373)
T 2x4f_A          234 GLARRYKPREK---------LKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACR  304 (373)
T ss_dssp             SSCEECCTTCB---------CCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTC
T ss_pred             CCceecCCccc---------cccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcc
Confidence            99987654322         123569999999999999999999999999999999999999998865544433343332


Q ss_pred             cCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhHHHHhcc
Q 005221          377 MATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKLIYQVGH  444 (708)
Q Consensus       377 ~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~~f~~~~  444 (708)
                      ....+..+ ..+                     ...+.+||.+||..||.+|||+.|+|+||||....
T Consensus       305 ~~~~~~~~-~~~---------------------~~~~~~li~~~L~~dp~~Rps~~e~l~hp~~~~~~  350 (373)
T 2x4f_A          305 WDLEDEEF-QDI---------------------SEEAKEFISKLLIKEKSWRISASEALKHPWLSDHK  350 (373)
T ss_dssp             CCSCSGGG-TTS---------------------CHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHCHH
T ss_pred             CCCChhhh-ccC---------------------CHHHHHHHHHHcCCChhhCCCHHHHhcCcCcCCCc
Confidence            22211110 011                     25789999999999999999999999999997653


No 76 
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00  E-value=4.7e-43  Score=365.11  Aligned_cols=261  Identities=19%  Similarity=0.200  Sum_probs=209.1

Q ss_pred             CCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCCCCCCChHHHHHHHHcCCCCCccEEEEEeee
Q 005221          139 PMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNTLGGSHGVPRVHFKGRQ  218 (708)
Q Consensus       139 ~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~~~~~~~~Ei~il~~L~h~~~v~~~~~~~~~  218 (708)
                      ++|++.+.||+|+||.||+|++..          ++..||+|++..........+.+|+++++.|+|+|++..+. ++..
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~----------~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~-~~~~   77 (277)
T 3f3z_A            9 QYYTLENTIGRGSWGEVKIAVQKG----------TRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYE-TFED   77 (277)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETT----------TCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEE-EEEC
T ss_pred             hhEEeeeEEeecCCEEEEEEEeCC----------CCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEE-EEec
Confidence            469999999999999999999977          78899999998765444556788999999999988665555 4577


Q ss_pred             CCEEEEEEecC-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcEEEeccC
Q 005221          219 GDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLG  297 (708)
Q Consensus       219 ~~~~~lvme~~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~vkL~DFG  297 (708)
                      +..+++||||+ +++|.+++.... .+++..++.++.||+.||.|||++||+||||||+|||+..++  ....+||+|||
T Consensus        78 ~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~--~~~~~~l~Dfg  154 (277)
T 3f3z_A           78 NTDIYLVMELCTGGELFERVVHKR-VFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDS--PDSPLKLIDFG  154 (277)
T ss_dssp             SSEEEEEEECCCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSS--TTCCEEECCCT
T ss_pred             CCeEEEEEeccCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEecCC--CCCcEEEEecc
Confidence            88899999999 889999887765 699999999999999999999999999999999999994322  22369999999


Q ss_pred             ccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhhcc
Q 005221          298 LATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCKKKM  377 (708)
Q Consensus       298 la~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLltG~~Pf~~~~~~~~~~~i~~~~~  377 (708)
                      ++.........         ...+||+.|+|||++.+. ++.++|||||||++|+|++|+.||.+.........+.....
T Consensus       155 ~~~~~~~~~~~---------~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~  224 (277)
T 3f3z_A          155 LAARFKPGKMM---------RTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKIREGTF  224 (277)
T ss_dssp             TCEECCTTSCB---------CCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC
T ss_pred             cceeccCccch---------hccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCC
Confidence            99876543221         235699999999998765 89999999999999999999999987654433333333222


Q ss_pred             CCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhHHHHhccc
Q 005221          378 ATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKLIYQVGHK  445 (708)
Q Consensus       378 ~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~~f~~~~~  445 (708)
                      ...... ...+                     ...+.+||.+||..||++|||+.|+|+||||+....
T Consensus       225 ~~~~~~-~~~~---------------------~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~~  270 (277)
T 3f3z_A          225 TFPEKD-WLNV---------------------SPQAESLIRRLLTKSPKQRITSLQALEHEWFEKQLS  270 (277)
T ss_dssp             CCCHHH-HTTS---------------------CHHHHHHHHHHTCSSTTTSCCHHHHTTSHHHHHHHC
T ss_pred             CCCchh-hhcC---------------------CHHHHHHHHHHccCChhhCcCHHHHhcCHHHhcccc
Confidence            111100 0001                     147899999999999999999999999999986543


No 77 
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00  E-value=5.5e-43  Score=383.16  Aligned_cols=270  Identities=20%  Similarity=0.255  Sum_probs=209.9

Q ss_pred             CCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCCCCCCChHHHHHHHHcCCCCCccEEEEEee
Q 005221          138 SPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNTLGGSHGVPRVHFKGR  217 (708)
Q Consensus       138 ~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~~~~~~~~Ei~il~~L~h~~~v~~~~~~~~  217 (708)
                      ..+|++++.||+|+||.||+|++..          +++.||||++....    ....+|+++|+.|+|+|+|..+..+..
T Consensus         6 ~~~y~~~~~lG~G~fg~V~~a~~~~----------~~~~vAiK~~~~~~----~~~~~E~~il~~l~hpnIv~l~~~~~~   71 (383)
T 3eb0_A            6 SKKYSLGKTLGTGSFGIVCEVFDIE----------SGKRFALKKVLQDP----RYKNRELDIMKVLDHVNIIKLVDYFYT   71 (383)
T ss_dssp             CTTEEEEEEEECC-CEEEEEEEETT----------TCCEEEEEEEECCT----TSCCHHHHHHTTCCCTTBCCEEEEEEE
T ss_pred             cceEEEEEEEEeccCEEEEEEEECC----------CCCEEEEEEEecCc----chHHHHHHHHHHcCCCCccchhheeee
Confidence            4589999999999999999999987          78999999987552    234589999999999998888776643


Q ss_pred             -------------------------------------eCCEEEEEEecCCCCHHHHHhc---cCCCCCHHHHHHHHHHHH
Q 005221          218 -------------------------------------QGDYYVMVMDMLGPSLWDVWNN---NSHTMSIEMVACIAIEAI  257 (708)
Q Consensus       218 -------------------------------------~~~~~~lvme~~ggsL~~~l~~---~~~~l~~~~~~~i~~qil  257 (708)
                                                           ...++++||||++++|.+.+..   .+..+++..++.++.||+
T Consensus        72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~  151 (383)
T 3eb0_A           72 TGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLF  151 (383)
T ss_dssp             C-------------------------------------CCEEEEEECCCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHH
T ss_pred             cCcccccccccccccccccccccccccccccccccCCCceEEEEEEecCCccHHHHHHHHHhcCCCCCHHHHHHHHHHHH
Confidence                                                 3456999999998898887763   345799999999999999


Q ss_pred             HHHHHHHhCCceecCCCCCcEEeCC-CCCCCCCcEEEeccCccccccCCCCCccccccCCCceeeccccccchhhhcCCC
Q 005221          258 SILEKMHSKGYVHGDVKPENFLLGP-PGTPDEKKLFLVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRT  336 (708)
Q Consensus       258 ~aL~yLH~~gIvHrDIKP~NILl~~-~g~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~  336 (708)
                      .||.|||++||+||||||+|||++. ++     .+||+|||+|+.+......         ...+||+.|+|||++.+..
T Consensus       152 ~aL~~LH~~gi~H~Dikp~Nil~~~~~~-----~~kl~Dfg~a~~~~~~~~~---------~~~~~t~~y~aPE~~~~~~  217 (383)
T 3eb0_A          152 RAVGFIHSLGICHRDIKPQNLLVNSKDN-----TLKLCDFGSAKKLIPSEPS---------VAYICSRFYRAPELMLGAT  217 (383)
T ss_dssp             HHHHHHHTTTEECSCCCGGGEEEETTTT-----EEEECCCTTCEECCTTSCC---------CCCCCCSSCCCHHHHTTCS
T ss_pred             HHHHHHHHCcCccCccCHHHEEEcCCCC-----cEEEEECCCCcccCCCCCC---------cCcccCCCccCHHHhcCCC
Confidence            9999999999999999999999974 44     6999999999876544322         2356899999999988754


Q ss_pred             -CCchhhHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhhccCCCCCCc------------cCCCChHHHHHHHHHHcCC
Q 005221          337 -GSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCKKKMATSPDGL------------CCFCPAPFRQFVEYVVNLK  403 (708)
Q Consensus       337 -~s~~~DIwSlGviL~eLltG~~Pf~~~~~~~~~~~i~~~~~~~~p~~l------------~~~~p~~~~~l~~~~~~~~  403 (708)
                       ++.++|||||||++|+|++|++||.+.+..+....+.+....+..+.+            +......+...       -
T Consensus       218 ~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~  290 (383)
T 3eb0_A          218 EYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKI-------L  290 (383)
T ss_dssp             SCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHH-------S
T ss_pred             CCCcchhhhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhh-------C
Confidence             899999999999999999999999987666555555443332211110            00000000000       0


Q ss_pred             CCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhHHHHhcc
Q 005221          404 FDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKLIYQVGH  444 (708)
Q Consensus       404 ~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~~f~~~~  444 (708)
                      +..  ....+.+||.+||..||++|||+.|+|+||||+...
T Consensus       291 ~~~--~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~  329 (383)
T 3eb0_A          291 PEG--TPSLAIDLLEQILRYEPDLRINPYEAMAHPFFDHLR  329 (383)
T ss_dssp             CTT--CCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGHHHH
T ss_pred             CCC--CCHHHHHHHHHHccCChhhCCCHHHHhcCHHHHHHH
Confidence            000  125789999999999999999999999999998643


No 78 
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00  E-value=1.4e-43  Score=368.87  Aligned_cols=254  Identities=23%  Similarity=0.218  Sum_probs=187.1

Q ss_pred             CCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCC---CCCCChHHHHHHHHcCCCCCccEEEEE
Q 005221          139 PMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKG---CNYGPPYEWQVYNTLGGSHGVPRVHFK  215 (708)
Q Consensus       139 ~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~---~~~~~~~Ei~il~~L~h~~~v~~~~~~  215 (708)
                      ++|++++.||+|+||.||+|++..          +++.||+|++......   ....+.+|+.+++.++|+|++..+.. 
T Consensus        13 ~~y~i~~~lg~G~~g~V~~~~~~~----------~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~-   81 (275)
T 2eue_A           13 GNYQIVKTLGEGSFAKVKLAYHTT----------TGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDV-   81 (275)
T ss_dssp             CCBCCCC---------EEEEECTT----------TCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEE-
T ss_pred             cceEEEEEEEcCCCEEEEEEEECC----------CCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEE-
Confidence            469999999999999999999877          7899999998765321   12346789999999999886665555 


Q ss_pred             eeeCCEEEEEEecCCCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcEEEec
Q 005221          216 GRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVD  295 (708)
Q Consensus       216 ~~~~~~~~lvme~~ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~vkL~D  295 (708)
                      ....+.+++||||++++|.+.+.... .+++..++.++.||+.||.|||++||+||||||+|||++.++     .+||+|
T Consensus        82 ~~~~~~~~lv~e~~~~~l~~~~~~~~-~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dikp~Nil~~~~~-----~~kl~D  155 (275)
T 2eue_A           82 IKSKDEIIMVIEYAGNELFDYIVQRD-KMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHL-----NVKIAD  155 (275)
T ss_dssp             EECSSCEEEEEECCCEEHHHHHHTSS-SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTS-----CEEECC
T ss_pred             EecCCeEEEEehhcCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCCeeccCChHhEEECCCC-----CEEEee
Confidence            46677899999999999999988765 699999999999999999999999999999999999998877     599999


Q ss_pred             cCccccccCCCCCccccccCCCceeeccccccchhhhcCCCC-CchhhHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhh
Q 005221          296 LGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTG-SRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCK  374 (708)
Q Consensus       296 FGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~-s~~~DIwSlGviL~eLltG~~Pf~~~~~~~~~~~i~~  374 (708)
                      ||++........         ....+||+.|+|||++.+..+ +.++|||||||++|+|++|+.||.+.........+..
T Consensus       156 fg~~~~~~~~~~---------~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~  226 (275)
T 2eue_A          156 FGLSNIMTDGNF---------LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISN  226 (275)
T ss_dssp             SSCC------------------------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH
T ss_pred             cccceeccCccc---------ccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh
Confidence            999986554322         123569999999999998876 7899999999999999999999987543332222222


Q ss_pred             hccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhHHHHhcc
Q 005221          375 KKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKLIYQVGH  444 (708)
Q Consensus       375 ~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~~f~~~~  444 (708)
                      ....     ++..+                     ...+.+||.+||..||.+|||+.|+++||||+...
T Consensus       227 ~~~~-----~~~~~---------------------~~~~~~li~~~l~~dP~~Rps~~e~l~h~~f~~~~  270 (275)
T 2eue_A          227 GVYT-----LPKFL---------------------SPGAAGLIKRMLIVNPLNRISIHEIMQDDWFKVDL  270 (275)
T ss_dssp             TCCC-----CCTTS---------------------CHHHHHHHHHHSCSSGGGSCCHHHHTTCHHHHTTC
T ss_pred             CCCC-----CCccC---------------------CHHHHHHHHHHhhcCHhHCCCHHHHhhCCeecccc
Confidence            2111     11111                     14688999999999999999999999999998753


No 79 
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00  E-value=4.4e-43  Score=396.16  Aligned_cols=261  Identities=23%  Similarity=0.224  Sum_probs=210.3

Q ss_pred             CCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCC--CCCCCCChHHHHHHHHcCCCCCccEEEEEe
Q 005221          139 PMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSS--KGCNYGPPYEWQVYNTLGGSHGVPRVHFKG  216 (708)
Q Consensus       139 ~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~--~~~~~~~~~Ei~il~~L~h~~~v~~~~~~~  216 (708)
                      ++|+++++||+|+||+||+|++..          +++.||||++....  ......+.+|+.+|++|+|+|+|..+.. .
T Consensus        22 ~~y~~~~~lG~G~~g~V~~~~~~~----------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~-~   90 (486)
T 3mwu_A           22 ERYNIVCMLGKGSFGEVLKCKDRI----------TQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI-L   90 (486)
T ss_dssp             HHEEEEEEEECCSSSEEEEEEETT----------TCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEE-E
T ss_pred             cceEEeEEEeecCCEEEEEEEECC----------CCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEE-E
Confidence            479999999999999999999977          78999999987542  2223457789999999999886665554 5


Q ss_pred             eeCCEEEEEEecC-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcEEEec
Q 005221          217 RQGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVD  295 (708)
Q Consensus       217 ~~~~~~~lvme~~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~vkL~D  295 (708)
                      .....+++||||+ |++|.+.+.... .+++..++.++.||+.||.|||++|||||||||+|||++..+  ....+||+|
T Consensus        91 ~~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~--~~~~~kl~D  167 (486)
T 3mwu_A           91 EDSSSFYIVGELYTGGELFDEIIKRK-RFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKE--KDCDIKIID  167 (486)
T ss_dssp             ECSSEEEEEECCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEESSSS--TTCCEEECS
T ss_pred             EcCCEEEEEEEcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCC--CCCCEEEEE
Confidence            6788999999999 899999987765 699999999999999999999999999999999999997544  234699999


Q ss_pred             cCccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhh
Q 005221          296 LGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCKK  375 (708)
Q Consensus       296 FGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLltG~~Pf~~~~~~~~~~~i~~~  375 (708)
                      ||+++.......         ....+||+.|+|||++.+ .++.++|||||||+||+|++|++||.+.+..+....+...
T Consensus       168 fg~a~~~~~~~~---------~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~  237 (486)
T 3mwu_A          168 FGLSTCFQQNTK---------MKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETG  237 (486)
T ss_dssp             CSCTTTBCCC-------------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHT
T ss_pred             CCcCeECCCCCc---------cCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC
Confidence            999987654322         123569999999999987 4899999999999999999999999886554444444443


Q ss_pred             ccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhHHHHhccc
Q 005221          376 KMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKLIYQVGHK  445 (708)
Q Consensus       376 ~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~~f~~~~~  445 (708)
                      ......+.+.                      .-...+.+||.+||..||.+|||+.|+|+||||+....
T Consensus       238 ~~~~~~~~~~----------------------~~s~~~~~li~~~L~~dp~~R~t~~~~l~hp~~~~~~~  285 (486)
T 3mwu_A          238 KYAFDLPQWR----------------------TISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKYSS  285 (486)
T ss_dssp             CCCSCSGGGG----------------------GSCHHHHHHHHHHTCSSTTTSCCHHHHHHCHHHHHTCC
T ss_pred             CCCCCCcccC----------------------CCCHHHHHHHHHHcCCChhhCcCHHHHhcCHhhccCcc
Confidence            3322211110                      11257899999999999999999999999999986543


No 80 
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00  E-value=5.1e-43  Score=383.74  Aligned_cols=257  Identities=22%  Similarity=0.242  Sum_probs=206.8

Q ss_pred             CCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCC---CCCCCCChHHHHHHHHcCCCCCccEEEE
Q 005221          138 SPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSS---KGCNYGPPYEWQVYNTLGGSHGVPRVHF  214 (708)
Q Consensus       138 ~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~---~~~~~~~~~Ei~il~~L~h~~~v~~~~~  214 (708)
                      .++|++++.||+|+||.||+|++..          +++.||+|++.+..   ......+.+|+.+|+.++|+|+|..+. 
T Consensus        14 ~~~y~i~~~LG~G~fG~V~~~~~~~----------~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~-   82 (384)
T 4fr4_A           14 FDHFEILRAIGKGSFGKVCIVQKND----------TKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWY-   82 (384)
T ss_dssp             GGGEEEEEEEECCTTCCEEEEEETT----------TCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEE-
T ss_pred             hHHeEEEEEEeeCCCeEEEEEEECC----------CCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEE-
Confidence            3579999999999999999999987          78999999987642   222335678999999999988666554 


Q ss_pred             EeeeCCEEEEEEecC-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcEEE
Q 005221          215 KGRQGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFL  293 (708)
Q Consensus       215 ~~~~~~~~~lvme~~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~vkL  293 (708)
                      ++...+.+||||||+ ||+|.+++.... .+++..++.++.||+.||.|||++|||||||||+||||+.++     .+||
T Consensus        83 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g-----~vkL  156 (384)
T 4fr4_A           83 SFQDEEDMFMVVDLLLGGDLRYHLQQNV-HFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLDEHG-----HVHI  156 (384)
T ss_dssp             EEECSSEEEEEECCCTTEEHHHHHHTTC-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTS-----CEEE
T ss_pred             EEEeCCEEEEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEECCCC-----CEEE
Confidence            456778899999999 999999998764 699999999999999999999999999999999999999887     5999


Q ss_pred             eccCccccccCCCCCccccccCCCceeeccccccchhhhcC---CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCchh
Q 005221          294 VDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLG---RTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGF  370 (708)
Q Consensus       294 ~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~---~~~s~~~DIwSlGviL~eLltG~~Pf~~~~~~~~~~  370 (708)
                      +|||+|+.+.....         ....+||+.|+|||++.+   ..++.++|||||||+||+|++|++||..........
T Consensus       157 ~DFG~a~~~~~~~~---------~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~  227 (384)
T 4fr4_A          157 TDFNIAAMLPRETQ---------ITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKE  227 (384)
T ss_dssp             CCCTTCEECCTTCC---------BCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHH
T ss_pred             eccceeeeccCCCc---------eeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHH
Confidence            99999987654322         234679999999999874   458999999999999999999999998755443322


Q ss_pred             hhhhhccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCc-chHHHHhHHHHhc
Q 005221          371 LVCKKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPI-STEGAQKLIYQVG  443 (708)
Q Consensus       371 ~i~~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps-~~e~l~h~~f~~~  443 (708)
                      .+.......  ..++..+                     ...+.+||.+||..||.+||+ +.+++.||||...
T Consensus       228 ~~~~~~~~~--~~~p~~~---------------------s~~~~~li~~lL~~dP~~R~s~~~~l~~hp~f~~~  278 (384)
T 4fr4_A          228 IVHTFETTV--VTYPSAW---------------------SQEMVSLLKKLLEPNPDQRFSQLSDVQNFPYMNDI  278 (384)
T ss_dssp             HHHHHHHCC--CCCCTTS---------------------CHHHHHHHHHHSCSSGGGSCCSHHHHHTSGGGTTC
T ss_pred             HHHHHhhcc--cCCCCcC---------------------CHHHHHHHHHHhcCCHhHhcccHHHHHcChhhhcC
Confidence            221111100  0011111                     157899999999999999999 7899999999643


No 81 
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00  E-value=4.6e-43  Score=372.72  Aligned_cols=251  Identities=21%  Similarity=0.244  Sum_probs=195.8

Q ss_pred             CCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCC--CCCCChHHHHHHHHc-CCCCCccEEEEE
Q 005221          139 PMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKG--CNYGPPYEWQVYNTL-GGSHGVPRVHFK  215 (708)
Q Consensus       139 ~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~--~~~~~~~Ei~il~~L-~h~~~v~~~~~~  215 (708)
                      ++|+++++||+|+||+||+|++..          +++.||||++......  .......|+..+..+ .|+| |+.+..+
T Consensus        57 ~~y~~~~~LG~G~~g~Vy~~~~~~----------~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~-iv~l~~~  125 (311)
T 3p1a_A           57 QSFQRLSRLGHGSYGEVFKVRSKE----------DGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPC-CVRLEQA  125 (311)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETT----------TSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTT-BCCEEEE
T ss_pred             hheeeeheeccCCCeEEEEEEECC----------CCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCc-EEEEEEE
Confidence            479999999999999999999987          7899999987654322  112344566666666 6666 4555555


Q ss_pred             eeeCCEEEEEEecCCCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcEEEec
Q 005221          216 GRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVD  295 (708)
Q Consensus       216 ~~~~~~~~lvme~~ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~vkL~D  295 (708)
                      +..++.++||||+++++|.+++...+..+++..++.|+.||+.||.|||++|||||||||+||||+.++     .+||+|
T Consensus       126 ~~~~~~~~lv~e~~~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~-----~~kl~D  200 (311)
T 3p1a_A          126 WEEGGILYLQTELCGPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRG-----RCKLGD  200 (311)
T ss_dssp             EEETTEEEEEEECCCCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECGGG-----CEEECC
T ss_pred             EEeCCEEEEEEeccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCC-----CEEEcc
Confidence            678899999999999999999988777899999999999999999999999999999999999998777     599999


Q ss_pred             cCccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhh
Q 005221          296 LGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCKK  375 (708)
Q Consensus       296 FGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLltG~~Pf~~~~~~~~~~~i~~~  375 (708)
                      ||+++.......         ....+||+.|+|||++.+ .++.++|||||||+||+|++|..||.+...   ...+...
T Consensus       201 FG~a~~~~~~~~---------~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~~---~~~~~~~  267 (311)
T 3p1a_A          201 FGLLVELGTAGA---------GEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEG---WQQLRQG  267 (311)
T ss_dssp             CTTCEECC---------------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHHH---HHHHTTT
T ss_pred             ceeeeecccCCC---------CcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCccH---HHHHhcc
Confidence            999987654322         123569999999999887 789999999999999999999766654211   1111111


Q ss_pred             ccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhHHHHh
Q 005221          376 KMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKLIYQV  442 (708)
Q Consensus       376 ~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~~f~~  442 (708)
                         ..+..+...+                     ...+.+||.+||..||++|||+.|+|+||||+.
T Consensus       268 ---~~~~~~~~~~---------------------~~~l~~li~~~L~~dP~~Rpt~~ell~hp~~~~  310 (311)
T 3p1a_A          268 ---YLPPEFTAGL---------------------SSELRSVLVMMLEPDPKLRATAEALLALPVLRQ  310 (311)
T ss_dssp             ---CCCHHHHTTS---------------------CHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGSC
T ss_pred             ---CCCcccccCC---------------------CHHHHHHHHHHcCCChhhCcCHHHHHhCccccC
Confidence               1111111111                     257899999999999999999999999999853


No 82 
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00  E-value=1.3e-42  Score=371.26  Aligned_cols=254  Identities=17%  Similarity=0.201  Sum_probs=206.6

Q ss_pred             CeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCCCCCCChHHHHHHHHcCCCCCccEEEEEeeeC
Q 005221          140 MYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNTLGGSHGVPRVHFKGRQG  219 (708)
Q Consensus       140 ~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~~~~~~~~Ei~il~~L~h~~~v~~~~~~~~~~  219 (708)
                      .|+..++||+|+||.||+|++..          +++.||||++..........+.+|+.+++.++|+|++..+..+ ..+
T Consensus        46 ~~~~~~~lg~G~~g~V~~a~~~~----------~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~-~~~  114 (321)
T 2c30_A           46 LLDSYVKIGEGSTGIVCLAREKH----------SGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSY-LVG  114 (321)
T ss_dssp             HEEEEEEEEEETTEEEEEEEETT----------TCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCTTBCCEEEEE-EET
T ss_pred             hhhccEEeccCCCeEEEEEEECC----------CCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCcceEEEEE-EEC
Confidence            48899999999999999999976          7899999999866544444577899999999999877666554 667


Q ss_pred             CEEEEEEecC-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcEEEeccCc
Q 005221          220 DYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGL  298 (708)
Q Consensus       220 ~~~~lvme~~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~vkL~DFGl  298 (708)
                      +.+++||||+ |++|.+++...  .+++..++.++.||+.||.|||++||+||||||+|||++.++     .+||+|||+
T Consensus       115 ~~~~lv~e~~~~~~L~~~l~~~--~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~-----~~kl~Dfg~  187 (321)
T 2c30_A          115 EELWVLMEFLQGGALTDIVSQV--RLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDG-----RVKLSDFGF  187 (321)
T ss_dssp             TEEEEEECCCCSCBHHHHHTTC--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTC-----CEEECCCTT
T ss_pred             CEEEEEEecCCCCCHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCC-----cEEEeeeee
Confidence            7899999999 89999988753  599999999999999999999999999999999999998877     599999999


Q ss_pred             cccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhhccC
Q 005221          299 ATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCKKKMA  378 (708)
Q Consensus       299 a~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLltG~~Pf~~~~~~~~~~~i~~~~~~  378 (708)
                      +.........        ....+||+.|+|||++.+..++.++|||||||+||+|++|+.||.+.........+....  
T Consensus       188 ~~~~~~~~~~--------~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~--  257 (321)
T 2c30_A          188 CAQISKDVPK--------RKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSP--  257 (321)
T ss_dssp             CEECCSSSCC--------BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSS--
T ss_pred             eeecccCccc--------cccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC--
Confidence            9876543221        124569999999999999999999999999999999999999998754332222221111  


Q ss_pred             CCCCCccCCCChHHHHHHHHHHcCCCCCcc-cHHHHHHHHHhhhCCCCCCCCcchHHHHhHHHHhc
Q 005221          379 TSPDGLCCFCPAPFRQFVEYVVNLKFDEEP-NYAKYISLFDGIVGPNPDIRPISTEGAQKLIYQVG  443 (708)
Q Consensus       379 ~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP-~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~~f~~~  443 (708)
                       .+. +                    .... -...+.+||.+||..||++|||+.|+++||||...
T Consensus       258 -~~~-~--------------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~~~~~  301 (321)
T 2c30_A          258 -PPK-L--------------------KNSHKVSPVLRDFLERMLVRDPQERATAQELLDHPFLLQT  301 (321)
T ss_dssp             -CCC-C--------------------TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGGGC
T ss_pred             -CCC-c--------------------CccccCCHHHHHHHHHHccCChhhCcCHHHHhcChhhccC
Confidence             110 0                    0000 12468899999999999999999999999998653


No 83 
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=5.2e-43  Score=377.96  Aligned_cols=278  Identities=20%  Similarity=0.211  Sum_probs=211.4

Q ss_pred             CCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCC-----CCCCCChHHHHHHHHcCCCCCccEE
Q 005221          138 SPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSK-----GCNYGPPYEWQVYNTLGGSHGVPRV  212 (708)
Q Consensus       138 ~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~-----~~~~~~~~Ei~il~~L~h~~~v~~~  212 (708)
                      .++|++++.||+|+||.||+|++..          +++.||||++.....     .....+.+|+.+++.|+|+|++..+
T Consensus         9 ~~~y~~~~~lg~G~~g~Vy~~~~~~----------~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~   78 (346)
T 1ua2_A            9 AKRYEKLDFLGEGQFATVYKARDKN----------TNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLL   78 (346)
T ss_dssp             ----CEEEEEEEETTEEEEEEECSS----------CCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEE
T ss_pred             hcccEEEeEEeecCCEEEEEEEECC----------CCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEE
Confidence            3579999999999999999999977          789999999875422     1133567899999999998876666


Q ss_pred             EEEeeeCCEEEEEEecCCCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcEE
Q 005221          213 HFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLF  292 (708)
Q Consensus       213 ~~~~~~~~~~~lvme~~ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~vk  292 (708)
                      ..+ ...+.+++||||+.++|.+++......+++..++.++.||+.||.|||++||+||||||+|||++.++     .+|
T Consensus        79 ~~~-~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~-----~~k  152 (346)
T 1ua2_A           79 DAF-GHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENG-----VLK  152 (346)
T ss_dssp             EEE-CCTTCCEEEEECCSEEHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTC-----CEE
T ss_pred             EEE-eeCCceEEEEEcCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEEcCCC-----CEE
Confidence            555 56778999999998899999988776799999999999999999999999999999999999999877     599


Q ss_pred             EeccCccccccCCCCCccccccCCCceeeccccccchhhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCchhh
Q 005221          293 LVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGR-TGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFL  371 (708)
Q Consensus       293 L~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~-~~s~~~DIwSlGviL~eLltG~~Pf~~~~~~~~~~~  371 (708)
                      |+|||+++........        ....+||+.|+|||++.+. .++.++|||||||+||+|++|.+||.+.+..+....
T Consensus       153 l~Dfg~a~~~~~~~~~--------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~  224 (346)
T 1ua2_A          153 LADFGLAKSFGSPNRA--------YTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTR  224 (346)
T ss_dssp             ECCCGGGSTTTSCCCC--------CCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH
T ss_pred             EEecccceeccCCccc--------CCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHH
Confidence            9999999876543221        1235699999999999765 589999999999999999999999998766555555


Q ss_pred             hhhhccCCCCCCccCCCChHHHHHHHHHHcCCCCCc------c-cHHHHHHHHHhhhCCCCCCCCcchHHHHhHHHHhcc
Q 005221          372 VCKKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEE------P-NYAKYISLFDGIVGPNPDIRPISTEGAQKLIYQVGH  444 (708)
Q Consensus       372 i~~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~r------P-~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~~f~~~~  444 (708)
                      +......+....+...+...     +..........      + -...+.+||.+||..||++|||+.|+|+||||....
T Consensus       225 i~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h~~f~~~~  299 (346)
T 1ua2_A          225 IFETLGTPTEEQWPDMCSLP-----DYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRP  299 (346)
T ss_dssp             HHHHHCCCCTTTSSSTTSST-----TCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSGGGTSSS
T ss_pred             HHHHcCCCChhhhhhhccCc-----ccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcChhhhcCC
Confidence            55544444333333221100     00000000000      0 125799999999999999999999999999997543


No 84 
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00  E-value=6.4e-43  Score=376.82  Aligned_cols=261  Identities=20%  Similarity=0.203  Sum_probs=199.3

Q ss_pred             CCCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCC--CCCCChHHHHHHHHcCCC-CCccEEE
Q 005221          137 GSPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKG--CNYGPPYEWQVYNTLGGS-HGVPRVH  213 (708)
Q Consensus       137 ~~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~--~~~~~~~Ei~il~~L~h~-~~v~~~~  213 (708)
                      ...+|++++.||+|+||.||+|++.           +++.||||++......  ....+.+|+.+|..|.|+ ++|+.++
T Consensus         7 ~~~~y~i~~~lG~G~~g~Vy~~~~~-----------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~   75 (343)
T 3dbq_A            7 KGRIYSILKQIGSGGSSKVFQVLNE-----------KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY   75 (343)
T ss_dssp             SSCEEEEEEEESCCSSEEEEEEECT-----------TSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEE
T ss_pred             ecCEEEEEEEEecCCCeEEEEEEeC-----------CCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEe
Confidence            3467999999999999999999873           4788999998765322  123467899999999873 5577777


Q ss_pred             EEeeeCCEEEEEEecCCCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcEEE
Q 005221          214 FKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFL  293 (708)
Q Consensus       214 ~~~~~~~~~~lvme~~ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~vkL  293 (708)
                      .++..+++++||||+.+++|.+++.... .+++..++.|+.||+.||.|||++||+||||||+||||+ ++     .+||
T Consensus        76 ~~~~~~~~~~lv~e~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~al~~lH~~~iiHrDikp~NIll~-~~-----~~kl  148 (343)
T 3dbq_A           76 DYEITDQYIYMVMECGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DG-----MLKL  148 (343)
T ss_dssp             EEEECSSEEEEEECCCSEEHHHHHHHSC-CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE-TT-----EEEE
T ss_pred             eeEeeCCEEEEEEeCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEE-CC-----cEEE
Confidence            7778889999999988999999998764 699999999999999999999999999999999999996 33     5999


Q ss_pred             eccCccccccCCCCCccccccCCCceeeccccccchhhhcC-----------CCCCchhhHHHHHHHHHHHHhCCCCCCC
Q 005221          294 VDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLG-----------RTGSRRDDLESLAYTLIFLLRGRLPWQG  362 (708)
Q Consensus       294 ~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~-----------~~~s~~~DIwSlGviL~eLltG~~Pf~~  362 (708)
                      +|||+++.........      .....+||+.|+|||++.+           ..++.++|||||||+||+|++|+.||..
T Consensus       149 ~DFG~a~~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~  222 (343)
T 3dbq_A          149 IDFGIANQMQPDTTSV------VKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ  222 (343)
T ss_dssp             CCCSSSCCC------------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred             eecccccccCcccccc------cCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchh
Confidence            9999998765432211      1224679999999999865           6789999999999999999999999976


Q ss_pred             CCCCCchhhhhhhccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhHHHHh
Q 005221          363 YQGENKGFLVCKKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKLIYQV  442 (708)
Q Consensus       363 ~~~~~~~~~i~~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~~f~~  442 (708)
                      .....  ..+...........++...                     ...+.+||.+||..||.+|||+.|+|+||||+.
T Consensus       223 ~~~~~--~~~~~~~~~~~~~~~~~~~---------------------~~~l~~li~~~L~~dp~~Rpt~~e~l~hp~~~~  279 (343)
T 3dbq_A          223 IINQI--SKLHAIIDPNHEIEFPDIP---------------------EKDLQDVLKCCLKRDPKQRISIPELLAHPYVQI  279 (343)
T ss_dssp             CCSHH--HHHHHHHCTTSCCCCCCCS---------------------CHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHS
T ss_pred             hhhHH--HHHHHHhcCCcccCCcccC---------------------CHHHHHHHHHHcCCChhHCCCHHHHHhCccccc
Confidence            43211  1111111001111111111                     147889999999999999999999999999986


Q ss_pred             cc
Q 005221          443 GH  444 (708)
Q Consensus       443 ~~  444 (708)
                      ..
T Consensus       280 ~~  281 (343)
T 3dbq_A          280 QT  281 (343)
T ss_dssp             CC
T ss_pred             cC
Confidence            44


No 85 
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00  E-value=5.6e-43  Score=367.07  Aligned_cols=258  Identities=22%  Similarity=0.288  Sum_probs=201.7

Q ss_pred             CCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCC-CCCCCChHHHHHHHHcCCCCCccEEEEEee
Q 005221          139 PMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSK-GCNYGPPYEWQVYNTLGGSHGVPRVHFKGR  217 (708)
Q Consensus       139 ~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~-~~~~~~~~Ei~il~~L~h~~~v~~~~~~~~  217 (708)
                      ++|.+.++||+|+||.||+|++..          ++..||+|++..... .....+.+|+++|+.|+|+|++..+.. +.
T Consensus        22 ~~y~~~~~lg~G~~g~V~~~~~~~----------~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~-~~   90 (285)
T 3is5_A           22 DLFIFKRKLGSGAFGDVHLVEERS----------SGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEV-FE   90 (285)
T ss_dssp             HHEEEEEEEEECSSCEEEEEEETT----------TCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEE-EE
T ss_pred             hheeecceeccCCCeEEEEEEEcc----------CCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHh-ee
Confidence            479999999999999999999977          789999999887532 223457789999999999886666555 46


Q ss_pred             eCCEEEEEEecC-CCCHHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcEEE
Q 005221          218 QGDYYVMVMDML-GPSLWDVWNNN---SHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFL  293 (708)
Q Consensus       218 ~~~~~~lvme~~-ggsL~~~l~~~---~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~vkL  293 (708)
                      ....+++||||+ +++|.+.+...   +..+++..++.|+.||+.||.|||++||+||||||+|||++..+  ....+||
T Consensus        91 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dikp~NIl~~~~~--~~~~~kl  168 (285)
T 3is5_A           91 DYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTS--PHSPIKI  168 (285)
T ss_dssp             CSSEEEEEECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEESSSS--TTCCEEE
T ss_pred             cCCeEEEEEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEECCCCHHHEEEecCC--CCCCEEE
Confidence            778899999999 88999988643   35799999999999999999999999999999999999996533  2336999


Q ss_pred             eccCccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCchhhhh
Q 005221          294 VDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVC  373 (708)
Q Consensus       294 ~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLltG~~Pf~~~~~~~~~~~i~  373 (708)
                      +|||++........         ....+||+.|+|||++. ..++.++|||||||+||+|++|+.||.+.........+.
T Consensus       169 ~Dfg~a~~~~~~~~---------~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~~~~  238 (285)
T 3is5_A          169 IDFGLAELFKSDEH---------STNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKAT  238 (285)
T ss_dssp             CCCCCCCC-------------------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH
T ss_pred             EeeecceecCCccc---------CcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHhhhc
Confidence            99999987654322         12356999999999986 568999999999999999999999998754333222222


Q ss_pred             hhccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhHHHHh
Q 005221          374 KKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKLIYQV  442 (708)
Q Consensus       374 ~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~~f~~  442 (708)
                      ......                       .....+-...+.+||.+||..||++|||+.|+|+||||+.
T Consensus       239 ~~~~~~-----------------------~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~f~~  284 (285)
T 3is5_A          239 YKEPNY-----------------------AVECRPLTPQAVDLLKQMLTKDPERRPSAAQVLHHEWFKQ  284 (285)
T ss_dssp             HCCCCC-----------------------CC--CCCCHHHHHHHHHHTCSCTTTSCCHHHHHTSGGGGC
T ss_pred             cCCccc-----------------------ccccCcCCHHHHHHHHHHccCChhhCcCHHHHhcCHHhhc
Confidence            111110                       0111122357899999999999999999999999999874


No 86 
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00  E-value=8e-43  Score=372.18  Aligned_cols=260  Identities=18%  Similarity=0.190  Sum_probs=208.9

Q ss_pred             CCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCCC------CCCChHHHHHHHHcCCCCCccEE
Q 005221          139 PMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGC------NYGPPYEWQVYNTLGGSHGVPRV  212 (708)
Q Consensus       139 ~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~~------~~~~~~Ei~il~~L~h~~~v~~~  212 (708)
                      ++|++++.||+|+||.||+|++..          +++.||+|++.......      ...+.+|+.+++.|.|+|++..+
T Consensus        12 ~~y~~~~~lg~G~~g~V~~~~~~~----------~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~   81 (321)
T 2a2a_A           12 DFYDIGEELGSGQFAIVKKCREKS----------TGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLH   81 (321)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETT----------TCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred             ccEEEeeEeeecCCEEEEEEEECC----------CCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEE
Confidence            469999999999999999999977          78999999998754322      12367899999999998866554


Q ss_pred             EEEeeeCCEEEEEEecC-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcE
Q 005221          213 HFKGRQGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKL  291 (708)
Q Consensus       213 ~~~~~~~~~~~lvme~~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~v  291 (708)
                      . ++...+.+++|||++ +++|.+++.... .+++..++.++.||+.||.|||++||+||||||+|||++.++. ....+
T Consensus        82 ~-~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~lH~~~ivH~dikp~NIl~~~~~~-~~~~~  158 (321)
T 2a2a_A           82 D-VYENRTDVVLILELVSGGELFDFLAQKE-SLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNI-PIPHI  158 (321)
T ss_dssp             E-EEECSSEEEEEECCCCSCBHHHHHHTCS-CEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTS-SSCCE
T ss_pred             E-EEecCCEEEEEEEcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChHHEEEecCCC-CcCCE
Confidence            4 457788899999999 899999997654 6999999999999999999999999999999999999987662 22359


Q ss_pred             EEeccCccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCchhh
Q 005221          292 FLVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFL  371 (708)
Q Consensus       292 kL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLltG~~Pf~~~~~~~~~~~  371 (708)
                      ||+|||+++........         ...+||+.|+|||++.+..++.++|||||||+||+|++|..||.+....+....
T Consensus       159 kl~Dfg~~~~~~~~~~~---------~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~  229 (321)
T 2a2a_A          159 KLIDFGLAHEIEDGVEF---------KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLAN  229 (321)
T ss_dssp             EECCCTTCEECCTTCCC---------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHH
T ss_pred             EEccCccceecCccccc---------cccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHHHHHH
Confidence            99999999876553221         235699999999999999999999999999999999999999987554333322


Q ss_pred             hhhhccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhHHHHh
Q 005221          372 VCKKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKLIYQV  442 (708)
Q Consensus       372 i~~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~~f~~  442 (708)
                      +.......         +..+.           ..  ....+.+||.+||..||++|||+.|+++||||..
T Consensus       230 i~~~~~~~---------~~~~~-----------~~--~~~~~~~li~~~l~~dp~~Rps~~e~l~hp~~~~  278 (321)
T 2a2a_A          230 ITSVSYDF---------DEEFF-----------SH--TSELAKDFIRKLLVKETRKRLTIQEALRHPWITP  278 (321)
T ss_dssp             HHTTCCCC---------CHHHH-----------TT--CCHHHHHHHHTTSCSSTTTSCCHHHHHHSTTTSC
T ss_pred             HHhccccc---------Chhhh-----------cc--cCHHHHHHHHHHcCCChhhCcCHHHHhcCccccC
Confidence            22221111         11000           00  1247899999999999999999999999999864


No 87 
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=3.2e-43  Score=381.38  Aligned_cols=264  Identities=22%  Similarity=0.287  Sum_probs=207.4

Q ss_pred             CCCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCC----CCCCCCChHHHHHHHHcCCCCCccEE
Q 005221          137 GSPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSS----KGCNYGPPYEWQVYNTLGGSHGVPRV  212 (708)
Q Consensus       137 ~~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~----~~~~~~~~~Ei~il~~L~h~~~v~~~  212 (708)
                      ..++|++++.||+|+||.||+|++...       ..+++.||||+++...    ......+.+|+++|+.|.++++|+.+
T Consensus        52 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~-------~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~  124 (355)
T 1vzo_A           52 GIENFELLKVLGTGAYGKVFLVRKISG-------HDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTL  124 (355)
T ss_dssp             CGGGEEEEEEEEETTTEEEEEEEECSS-------TTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCE
T ss_pred             cccceEEEEEeccCCCEEEEEEEEccc-------CCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEE
Confidence            346899999999999999999998531       1268899999987532    22344577899999999655556677


Q ss_pred             EEEeeeCCEEEEEEecC-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcE
Q 005221          213 HFKGRQGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKL  291 (708)
Q Consensus       213 ~~~~~~~~~~~lvme~~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~v  291 (708)
                      +.++...+.++|||||+ +++|.+++.... .+++..++.++.||+.||.|||++||+||||||+||||+.++     .+
T Consensus       125 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~-----~~  198 (355)
T 1vzo_A          125 HYAFQTETKLHLILDYINGGELFTHLSQRE-RFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNG-----HV  198 (355)
T ss_dssp             EEEEEETTEEEEEECCCCSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTS-----CE
T ss_pred             EEEEeeCceEEEEeecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCC-----cE
Confidence            77778888999999999 889999998765 699999999999999999999999999999999999998877     59


Q ss_pred             EEeccCccccccCCCCCccccccCCCceeeccccccchhhhcCC--CCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCch
Q 005221          292 FLVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGR--TGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKG  369 (708)
Q Consensus       292 kL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~--~~s~~~DIwSlGviL~eLltG~~Pf~~~~~~~~~  369 (708)
                      ||+|||+++.+......       .....+||+.|+|||++.+.  .++.++|||||||+||+|++|+.||.........
T Consensus       199 kl~DfG~a~~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~  271 (355)
T 1vzo_A          199 VLTDFGLSKEFVADETE-------RAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQ  271 (355)
T ss_dssp             EESCSSEEEECCGGGGG-------GGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCH
T ss_pred             EEeeCCCCeecccCCCC-------cccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchH
Confidence            99999999875433221       12246799999999999863  4789999999999999999999999865443332


Q ss_pred             hhhhhhccCCCCCCccCCCChHHHHHHHHHHcCCCCCccc-HHHHHHHHHhhhCCCCCCCC-----cchHHHHhHHHHhc
Q 005221          370 FLVCKKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPN-YAKYISLFDGIVGPNPDIRP-----ISTEGAQKLIYQVG  443 (708)
Q Consensus       370 ~~i~~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~-~~~l~~LL~~mL~~dP~~Rp-----s~~e~l~h~~f~~~  443 (708)
                      ..+....                       ....+...+. ...+.+||.+||..||.+||     ++.|+++|+||+..
T Consensus       272 ~~~~~~~-----------------------~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~~f~~~  328 (355)
T 1vzo_A          272 AEISRRI-----------------------LKSEPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKI  328 (355)
T ss_dssp             HHHHHHH-----------------------HHCCCCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGTTC
T ss_pred             HHHHHHH-----------------------hccCCCCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCcchhcC
Confidence            2222211                       1111111111 14688999999999999999     99999999998753


No 88 
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00  E-value=3.4e-43  Score=383.34  Aligned_cols=277  Identities=18%  Similarity=0.187  Sum_probs=204.8

Q ss_pred             CCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCC--CCCCChHHHHHHHHcCCCCCccEEEEEe
Q 005221          139 PMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKG--CNYGPPYEWQVYNTLGGSHGVPRVHFKG  216 (708)
Q Consensus       139 ~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~--~~~~~~~Ei~il~~L~h~~~v~~~~~~~  216 (708)
                      ++|++++.||+|+||.||+|++..          +++.||||++......  ....+.+|+.+++.++|+|++..+..+.
T Consensus        25 ~~y~~~~~lG~G~~g~V~~~~~~~----------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~   94 (371)
T 2xrw_A           25 KRYQNLKPIGSGAQGIVCAAYDAI----------LERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFT   94 (371)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETT----------TTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred             hheeEeeeeEecCCEEEEEEEECC----------CCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeec
Confidence            589999999999999999999977          7899999999764221  1234668999999999999888777765


Q ss_pred             eeC-----CEEEEEEecCCCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcE
Q 005221          217 RQG-----DYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKL  291 (708)
Q Consensus       217 ~~~-----~~~~lvme~~ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~v  291 (708)
                      ..+     ..+++||||++++|.+.+..   .+++..++.++.||+.||.|||++||+||||||+|||++.++     .+
T Consensus        95 ~~~~~~~~~~~~lv~e~~~~~l~~~~~~---~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIl~~~~~-----~~  166 (371)
T 2xrw_A           95 PQKSLEEFQDVYIVMELMDANLCQVIQM---ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC-----TL  166 (371)
T ss_dssp             SCCSTTTCCEEEEEEECCSEEHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTS-----CE
T ss_pred             cccccccccceEEEEEcCCCCHHHHHhh---ccCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCC-----CE
Confidence            433     48999999999999998863   599999999999999999999999999999999999999877     59


Q ss_pred             EEeccCccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCchhh
Q 005221          292 FLVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFL  371 (708)
Q Consensus       292 kL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLltG~~Pf~~~~~~~~~~~  371 (708)
                      ||+|||+++.......         ....+||+.|+|||++.+..++.++|||||||+||+|++|++||.+.+..+....
T Consensus       167 kl~Dfg~a~~~~~~~~---------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~  237 (371)
T 2xrw_A          167 KILDFGLARTAGTSFM---------MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNK  237 (371)
T ss_dssp             EECCCCC-------------------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH
T ss_pred             EEEEeecccccccccc---------cCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence            9999999986543321         1235699999999999999999999999999999999999999998765544444


Q ss_pred             hhhhccCCCCCCccCCCChHHHHHHHHHHcCC------------CCCc-----ccHHHHHHHHHhhhCCCCCCCCcchHH
Q 005221          372 VCKKKMATSPDGLCCFCPAPFRQFVEYVVNLK------------FDEE-----PNYAKYISLFDGIVGPNPDIRPISTEG  434 (708)
Q Consensus       372 i~~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~------------~~~r-----P~~~~l~~LL~~mL~~dP~~Rps~~e~  434 (708)
                      +......+.++ +...+...+..++.......            +...     .....+++||.+||..||++|||+.|+
T Consensus       238 i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~  316 (371)
T 2xrw_A          238 VIEQLGTPCPE-FMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEA  316 (371)
T ss_dssp             HHC-CCCCCHH-HHTTSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred             HHHHhCCCCHH-HHHHhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHH
Confidence            44332222221 11222222222221110000            0000     013578999999999999999999999


Q ss_pred             HHhHHHHhc
Q 005221          435 AQKLIYQVG  443 (708)
Q Consensus       435 l~h~~f~~~  443 (708)
                      |+||||+..
T Consensus       317 l~hp~~~~~  325 (371)
T 2xrw_A          317 LQHPYINVW  325 (371)
T ss_dssp             HHSHHHHTT
T ss_pred             hCCcchhhh
Confidence            999999753


No 89 
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00  E-value=7.5e-43  Score=395.13  Aligned_cols=259  Identities=22%  Similarity=0.252  Sum_probs=207.5

Q ss_pred             CCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCC--CCCCCCChHHHHHHHHcCCCCCccEEEEEe
Q 005221          139 PMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSS--KGCNYGPPYEWQVYNTLGGSHGVPRVHFKG  216 (708)
Q Consensus       139 ~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~--~~~~~~~~~Ei~il~~L~h~~~v~~~~~~~  216 (708)
                      ++|+++++||+|+||.||+|++..          ++..||||++....  ......+.+|+.+|+.|+|+|+|..+.. +
T Consensus        37 ~~y~~~~~lG~G~~g~V~~~~~~~----------~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~-~  105 (494)
T 3lij_A           37 EMYQRVKKLGSGAYGEVLLCRDKV----------THVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDF-F  105 (494)
T ss_dssp             HHEEEEEEEECC---EEEEEEETT----------TCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEE-E
T ss_pred             cCeEEeeEEecCCCEEEEEEEECC----------CCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEE-E
Confidence            369999999999999999999987          78999999998653  2223457789999999999986666555 4


Q ss_pred             eeCCEEEEEEecC-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcEEEec
Q 005221          217 RQGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVD  295 (708)
Q Consensus       217 ~~~~~~~lvme~~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~vkL~D  295 (708)
                      .....+||||||+ |++|.+.+.... .+++..++.|+.||+.||.|||++|||||||||+|||++..+  ....+||+|
T Consensus       106 ~~~~~~~lv~e~~~~g~L~~~~~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~--~~~~~kl~D  182 (494)
T 3lij_A          106 EDKRNYYLVMECYKGGELFDEIIHRM-KFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKE--KDALIKIVD  182 (494)
T ss_dssp             ECSSEEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSS--TTCCEEECC
T ss_pred             EeCCEEEEEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCceeccCChhhEEEeCCC--CCCcEEEEE
Confidence            6788899999999 889999887764 699999999999999999999999999999999999998654  234699999


Q ss_pred             cCccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhh
Q 005221          296 LGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCKK  375 (708)
Q Consensus       296 FGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLltG~~Pf~~~~~~~~~~~i~~~  375 (708)
                      ||+++.......         ....+||+.|+|||++. ..++.++|||||||++|+|++|.+||.+....+....+...
T Consensus       183 fG~a~~~~~~~~---------~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~  252 (494)
T 3lij_A          183 FGLSAVFENQKK---------MKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKG  252 (494)
T ss_dssp             CTTCEECBTTBC---------BCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHT
T ss_pred             CCCCeECCCCcc---------ccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC
Confidence            999987654322         12356999999999986 46899999999999999999999999986655544444444


Q ss_pred             ccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhHHHHhc
Q 005221          376 KMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKLIYQVG  443 (708)
Q Consensus       376 ~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~~f~~~  443 (708)
                      ........+. .+                     ...+.+||.+||..||.+|||+.|+|+||||+..
T Consensus       253 ~~~~~~~~~~-~~---------------------s~~~~~li~~~L~~dp~~R~s~~e~l~hp~~~~~  298 (494)
T 3lij_A          253 KYTFDSPEWK-NV---------------------SEGAKDLIKQMLQFDSQRRISAQQALEHPWIKEM  298 (494)
T ss_dssp             CCCCCSGGGT-TS---------------------CHHHHHHHHHHTCSSTTTSCCHHHHHTCHHHHHH
T ss_pred             CCCCCchhcc-cC---------------------CHHHHHHHHHHCCCChhhCccHHHHhcCcccccC
Confidence            3332222111 11                     2478999999999999999999999999999754


No 90 
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00  E-value=4.8e-43  Score=389.84  Aligned_cols=280  Identities=19%  Similarity=0.202  Sum_probs=208.8

Q ss_pred             CCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCCCCCCChHHHHHHHHcCCC-----CCccEE
Q 005221          138 SPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNTLGGS-----HGVPRV  212 (708)
Q Consensus       138 ~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~~~~~~~~Ei~il~~L~h~-----~~v~~~  212 (708)
                      ..+|++++.||+|+||.||+|++..          +++.||||++..... ....+.+|+.+++.|+|.     .+|..+
T Consensus        96 ~~ry~~~~~LG~G~fg~V~~a~~~~----------~~~~vAvK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~~~~~iv~~  164 (429)
T 3kvw_A           96 AYRYEVLKVIGKGSFGQVVKAYDHK----------VHQHVALKMVRNEKR-FHRQAAEEIRILEHLRKQDKDNTMNVIHM  164 (429)
T ss_dssp             TTTEEEEEEEEESSSEEEEEEEETT----------TTEEEEEEEECSCHH-HHHHHHHHHHHHHHHHTTCTTSCSCBCCE
T ss_pred             cCcEEEEEEcccCccEEEEEEEECC----------CCcEEEEEEECCccc-hHHHHHHHHHHHHHHhhccccCCcCEEEE
Confidence            3579999999999999999999977          789999999875421 123466799999998543     145555


Q ss_pred             EEEeeeCCEEEEEEecCCCCHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcE
Q 005221          213 HFKGRQGDYYVMVMDMLGPSLWDVWNNNS-HTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKL  291 (708)
Q Consensus       213 ~~~~~~~~~~~lvme~~ggsL~~~l~~~~-~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~v  291 (708)
                      ...+...+.++||||+++++|.+++.... ..+++..++.|+.||+.||.|||++|||||||||+||||+.++.   ..+
T Consensus       165 ~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NILl~~~~~---~~v  241 (429)
T 3kvw_A          165 LENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGR---SGI  241 (429)
T ss_dssp             EEEEEETTEEEEEECCCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHTEECSCCSGGGEEESSTTS---CCE
T ss_pred             EeecccCCeEEEEEeccCCCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEccCCC---cce
Confidence            56667789999999999999999998754 45999999999999999999999999999999999999987763   239


Q ss_pred             EEeccCccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCchhh
Q 005221          292 FLVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFL  371 (708)
Q Consensus       292 kL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLltG~~Pf~~~~~~~~~~~  371 (708)
                      ||+|||+|+......           ...+||+.|+|||++.+..++.++|||||||+||+|++|++||.+.+..+....
T Consensus       242 kL~DFG~a~~~~~~~-----------~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~l~~  310 (429)
T 3kvw_A          242 KVIDFGSSCYEHQRV-----------YTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLAC  310 (429)
T ss_dssp             EECCCTTCEETTCCC-----------CSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH
T ss_pred             EEeecccceecCCcc-----------cccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence            999999997644321           235699999999999999999999999999999999999999998765554444


Q ss_pred             hhhhccCCCCCCccCCCChHHHHHHHHH------H---------------------cCCCCC--------cccHHHHHHH
Q 005221          372 VCKKKMATSPDGLCCFCPAPFRQFVEYV------V---------------------NLKFDE--------EPNYAKYISL  416 (708)
Q Consensus       372 i~~~~~~~~p~~l~~~~p~~~~~l~~~~------~---------------------~~~~~~--------rP~~~~l~~L  416 (708)
                      +......+.+..+. .... ...++...      .                     ...+..        ......+++|
T Consensus       311 i~~~~~~p~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dl  388 (429)
T 3kvw_A          311 MIELLGMPSQKLLD-ASKR-AKNFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDF  388 (429)
T ss_dssp             HHHHHCCCCHHHHH-TBTT-HHHHBCTTSCBTTSCEECCCC--CEECCEECTTCCEECSTTCSCHHHHTTTCCCHHHHHH
T ss_pred             HHHHcCCCCHHHHH-hhhh-hhhccCCCCCcccccccccccccccccccccchhhccCCccchhhHhhccccchHHHHHH
Confidence            44332211111000 0000 00000000      0                     000000        0012568999


Q ss_pred             HHhhhCCCCCCCCcchHHHHhHHHHhcc
Q 005221          417 FDGIVGPNPDIRPISTEGAQKLIYQVGH  444 (708)
Q Consensus       417 L~~mL~~dP~~Rps~~e~l~h~~f~~~~  444 (708)
                      |.+||..||++|||+.|+|+||||+...
T Consensus       389 i~~~L~~dP~~Rpta~e~L~Hpw~~~~~  416 (429)
T 3kvw_A          389 LKQCLEWDPAVRMTPGQALRHPWLRRRL  416 (429)
T ss_dssp             HHHHTCSSTTTSCCHHHHHTSTTTC---
T ss_pred             HHHHCCCChhhCCCHHHHhCChhhccCC
Confidence            9999999999999999999999987543


No 91 
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00  E-value=8.1e-43  Score=383.20  Aligned_cols=260  Identities=20%  Similarity=0.206  Sum_probs=199.4

Q ss_pred             CCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCC--CCCCChHHHHHHHHcCC-CCCccEEEE
Q 005221          138 SPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKG--CNYGPPYEWQVYNTLGG-SHGVPRVHF  214 (708)
Q Consensus       138 ~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~--~~~~~~~Ei~il~~L~h-~~~v~~~~~  214 (708)
                      ..+|++++.||+|+||.||+|++.           .++.||||++......  ....+.+|+.+|+.|.| +++|+.++.
T Consensus        55 ~~~y~~~~~LG~G~fg~Vy~~~~~-----------~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~  123 (390)
T 2zmd_A           55 GRIYSILKQIGSGGSSKVFQVLNE-----------KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD  123 (390)
T ss_dssp             TEEEEEEEEEECCSSEEEEEEECT-----------TCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEE
T ss_pred             CCceEEEEEEccCCCeEEEEEEcC-----------CCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEE
Confidence            346999999999999999999863           3788999999765321  22356789999999986 456677777


Q ss_pred             EeeeCCEEEEEEecCCCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcEEEe
Q 005221          215 KGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLV  294 (708)
Q Consensus       215 ~~~~~~~~~lvme~~ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~vkL~  294 (708)
                      ++...+.+|||||+.+++|.+++.... .+++..++.|+.||+.||.|||++|||||||||+||||+. +     .+||+
T Consensus       124 ~~~~~~~~~lv~E~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~-~-----~~kl~  196 (390)
T 2zmd_A          124 YEITDQYIYMVMECGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD-G-----MLKLI  196 (390)
T ss_dssp             EEECSSEEEEEEECCSEEHHHHHHHCS-SCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCCGGGEEESS-S-----CEEEC
T ss_pred             EEecCCEEEEEEecCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEEEC-C-----eEEEE
Confidence            777888999999977999999998765 7999999999999999999999999999999999999953 3     59999


Q ss_pred             ccCccccccCCCCCccccccCCCceeeccccccchhhhcC-----------CCCCchhhHHHHHHHHHHHHhCCCCCCCC
Q 005221          295 DLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLG-----------RTGSRRDDLESLAYTLIFLLRGRLPWQGY  363 (708)
Q Consensus       295 DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~-----------~~~s~~~DIwSlGviL~eLltG~~Pf~~~  363 (708)
                      |||+++.+.......      .....+||+.|+|||++.+           ..++.++|||||||+||+|++|++||...
T Consensus       197 DFG~a~~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~  270 (390)
T 2zmd_A          197 DFGIANQMQPDTTSV------VKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQI  270 (390)
T ss_dssp             CCSSSCCC---------------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTC
T ss_pred             ecCccccccCCCccc------cCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhh
Confidence            999998765432211      1224579999999999876           46899999999999999999999999764


Q ss_pred             CCCCchhhhhhhccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhHHHHhc
Q 005221          364 QGENKGFLVCKKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKLIYQVG  443 (708)
Q Consensus       364 ~~~~~~~~i~~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~~f~~~  443 (708)
                      ....  ..+...........++...                     ...+.+||.+||..||.+||++.|+|+||||+..
T Consensus       271 ~~~~--~~~~~~~~~~~~~~~~~~~---------------------~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~~~  327 (390)
T 2zmd_A          271 INQI--SKLHAIIDPNHEIEFPDIP---------------------EKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQ  327 (390)
T ss_dssp             CCHH--HHHHHHHCTTSCCCCCCCS---------------------CHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHSC
T ss_pred             hHHH--HHHHHHhCccccCCCCccc---------------------hHHHHHHHHHHcccChhhCCCHHHHhhCcCcccc
Confidence            3211  1111110000000011111                     2478999999999999999999999999999854


Q ss_pred             c
Q 005221          444 H  444 (708)
Q Consensus       444 ~  444 (708)
                      .
T Consensus       328 ~  328 (390)
T 2zmd_A          328 T  328 (390)
T ss_dssp             C
T ss_pred             C
Confidence            3


No 92 
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00  E-value=3.9e-43  Score=411.38  Aligned_cols=256  Identities=18%  Similarity=0.176  Sum_probs=215.0

Q ss_pred             CCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecC---CCCCCCCChHHHHHHHHcCCCCCccEEEE
Q 005221          138 SPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRS---SKGCNYGPPYEWQVYNTLGGSHGVPRVHF  214 (708)
Q Consensus       138 ~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~---~~~~~~~~~~Ei~il~~L~h~~~v~~~~~  214 (708)
                      .++|++++.||+|+||.||+|++..          +++.||||++.+.   .......+..|..+|..+.++++|+.++.
T Consensus       340 ~~~f~~~~~LG~G~fG~V~~~~~~~----------~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~  409 (674)
T 3pfq_A          340 LTDFNFLMVLGKGSFGKVMLSERKG----------TDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHS  409 (674)
T ss_dssp             CTTEEEEEESSBTTTBCEEEEEESS----------SCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEE
T ss_pred             ccceEEEEEEccCCCEEEEEEEECC----------CCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEE
Confidence            4579999999999999999999987          7899999999864   22223456779999999988888999999


Q ss_pred             EeeeCCEEEEEEecC-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcEEE
Q 005221          215 KGRQGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFL  293 (708)
Q Consensus       215 ~~~~~~~~~lvme~~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~vkL  293 (708)
                      ++.+.+.+||||||+ ||+|.+++...+ .+++..++.|+.||+.||+|||++|||||||||+||||+.++     .+||
T Consensus       410 ~~~~~~~~~lV~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~gIiHrDLKp~NILl~~~g-----~ikL  483 (674)
T 3pfq_A          410 CFQTMDRLYFVMEYVNGGDLMYHIQQVG-RFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEG-----HIKI  483 (674)
T ss_dssp             ECBCSSEEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTSEECCCCCSTTEEECSSS-----CEEE
T ss_pred             EEEeCCEEEEEEeCcCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCeEeccCChhhEEEcCCC-----cEEE
Confidence            889999999999999 899999998765 699999999999999999999999999999999999999887     5999


Q ss_pred             eccCccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCchhhhh
Q 005221          294 VDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVC  373 (708)
Q Consensus       294 ~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLltG~~Pf~~~~~~~~~~~i~  373 (708)
                      +|||+|+.......        ....++||+.|+|||++.+..|+.++|||||||+||||++|++||.+.+..+....+.
T Consensus       484 ~DFGla~~~~~~~~--------~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~~~~i~  555 (674)
T 3pfq_A          484 ADFGMCKENIWDGV--------TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIM  555 (674)
T ss_dssp             CCCTTCEECCCTTC--------CBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH
T ss_pred             eecceeeccccCCc--------ccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHHHHHHHHH
Confidence            99999986433221        1235789999999999999999999999999999999999999999865544433443


Q ss_pred             hhccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcc-----hHHHHhHHHHhc
Q 005221          374 KKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPIS-----TEGAQKLIYQVG  443 (708)
Q Consensus       374 ~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~-----~e~l~h~~f~~~  443 (708)
                      ......     +..+                     ..++.+||.+||..||++||++     .|+++||||...
T Consensus       556 ~~~~~~-----p~~~---------------------s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~h~ff~~i  604 (674)
T 3pfq_A          556 EHNVAY-----PKSM---------------------SKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYI  604 (674)
T ss_dssp             SSCCCC-----CTTS---------------------CHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHSSGGGSSC
T ss_pred             hCCCCC-----CccC---------------------CHHHHHHHHHHccCCHHHCCCCCCCcHHHHhcCccccCC
Confidence            322211     1111                     2578999999999999999998     999999999754


No 93 
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00  E-value=9.2e-43  Score=391.91  Aligned_cols=255  Identities=24%  Similarity=0.248  Sum_probs=209.3

Q ss_pred             CCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCC---CCCCCCChHHHHHHHHcCCCCCccEEEEE
Q 005221          139 PMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSS---KGCNYGPPYEWQVYNTLGGSHGVPRVHFK  215 (708)
Q Consensus       139 ~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~---~~~~~~~~~Ei~il~~L~h~~~v~~~~~~  215 (708)
                      ++|.+++.||+|+||.||+|++..          +++.||||++....   ......+.+|+.+|+.++|+|++..+.. 
T Consensus        16 ~~Y~l~~~LG~G~fg~V~~a~~~~----------~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~-   84 (476)
T 2y94_A           16 GHYILGDTLGVGTFGKVKVGKHEL----------TGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQV-   84 (476)
T ss_dssp             TTEEEEEEEECCSSSCEEEEEETT----------TCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEE-
T ss_pred             cCEEEEEEEeeCCCeEEEEEEECC----------CCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEE-
Confidence            379999999999999999999977          78999999997642   1223357789999999999986665554 


Q ss_pred             eeeCCEEEEEEecC-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcEEEe
Q 005221          216 GRQGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLV  294 (708)
Q Consensus       216 ~~~~~~~~lvme~~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~vkL~  294 (708)
                      ....+.++|||||+ |++|.+++...+ .+++..++.++.||+.||.|||++||+||||||+|||++.++     .+||+
T Consensus        85 ~~~~~~~~lv~E~~~gg~L~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIll~~~~-----~vkL~  158 (476)
T 2y94_A           85 ISTPSDIFMVMEYVSGGELFDYICKNG-RLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHM-----NAKIA  158 (476)
T ss_dssp             EECSSEEEEEEECCSSEEHHHHTTSSS-SCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEECTTC-----CEEEC
T ss_pred             EEECCEEEEEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCCCcccccHHHEEEecCC-----CeEEE
Confidence            46778899999999 899999997654 699999999999999999999999999999999999999877     59999


Q ss_pred             ccCccccccCCCCCccccccCCCceeeccccccchhhhcCCCC-CchhhHHHHHHHHHHHHhCCCCCCCCCCCCchhhhh
Q 005221          295 DLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTG-SRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVC  373 (708)
Q Consensus       295 DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~-s~~~DIwSlGviL~eLltG~~Pf~~~~~~~~~~~i~  373 (708)
                      |||+++.......         ....+||+.|+|||++.+..+ +.++|||||||+||+|++|++||.+.........+.
T Consensus       159 DFG~a~~~~~~~~---------~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~  229 (476)
T 2y94_A          159 DFGLSNMMSDGEF---------LRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKIC  229 (476)
T ss_dssp             CCSSCEECCTTCC---------BCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHHHHHHHH
T ss_pred             eccchhhcccccc---------ccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHHHHHHHh
Confidence            9999987654321         124679999999999998876 789999999999999999999998755433333333


Q ss_pred             hhccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhHHHHhccc
Q 005221          374 KKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKLIYQVGHK  445 (708)
Q Consensus       374 ~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~~f~~~~~  445 (708)
                      ...... |    ..+                     ...+.+||.+||..||.+|||+.|+++||||.....
T Consensus       230 ~~~~~~-p----~~~---------------------s~~~~~Li~~~L~~dP~~Rpt~~eil~hp~~~~~~~  275 (476)
T 2y94_A          230 DGIFYT-P----QYL---------------------NPSVISLLKHMLQVDPMKRATIKDIREHEWFKQDLP  275 (476)
T ss_dssp             TTCCCC-C----TTC---------------------CHHHHHHHHHHTCSSTTTSCCHHHHHTCHHHHTTCC
T ss_pred             cCCcCC-C----ccC---------------------CHHHHHHHHHHcCCCchhCcCHHHHHhCHHhhhcCc
Confidence            222111 1    111                     147899999999999999999999999999986543


No 94 
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00  E-value=4.8e-43  Score=375.30  Aligned_cols=264  Identities=18%  Similarity=0.204  Sum_probs=210.0

Q ss_pred             CCeEEE-EeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCC--CCCCCChHHHHHHHHcCCCCCccEEEEE
Q 005221          139 PMYRLE-RKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSK--GCNYGPPYEWQVYNTLGGSHGVPRVHFK  215 (708)
Q Consensus       139 ~~Y~i~-~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~--~~~~~~~~Ei~il~~L~h~~~v~~~~~~  215 (708)
                      ++|.+. +.||+|+||.||+|++..          +++.||+|++.....  .....+.+|+.++..+.++++|+.+..+
T Consensus        28 ~~y~~~~~~lG~G~~g~V~~~~~~~----------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~   97 (327)
T 3lm5_A           28 NFYILTSKELGRGKFAVVRQCISKS----------TGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEV   97 (327)
T ss_dssp             HHEEEEEEEEEEETTEEEEEEEETT----------TCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEE
T ss_pred             hEEeeccceeCCCCCeEEEEEEECC----------CCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEE
Confidence            478888 899999999999999987          789999999886432  2234567899999999886667777777


Q ss_pred             eeeCCEEEEEEecC-CCCHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcEEE
Q 005221          216 GRQGDYYVMVMDML-GPSLWDVWNNN-SHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFL  293 (708)
Q Consensus       216 ~~~~~~~~lvme~~-ggsL~~~l~~~-~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~vkL  293 (708)
                      +...+.+++||||+ +++|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++...  ....+||
T Consensus        98 ~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~givH~Dikp~NIl~~~~~--~~~~~kL  175 (327)
T 3lm5_A           98 YENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIY--PLGDIKI  175 (327)
T ss_dssp             EECSSEEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESCBT--TBCCEEE
T ss_pred             EEeCCeEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCChHHEEEecCC--CCCcEEE
Confidence            78889999999999 88999988653 35799999999999999999999999999999999999998732  1236999


Q ss_pred             eccCccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCchhhhh
Q 005221          294 VDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVC  373 (708)
Q Consensus       294 ~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLltG~~Pf~~~~~~~~~~~i~  373 (708)
                      +|||+++.......         ....+||+.|+|||++.+..++.++|||||||+||+|++|+.||.+.........+.
T Consensus       176 ~Dfg~a~~~~~~~~---------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~  246 (327)
T 3lm5_A          176 VDFGMSRKIGHACE---------LREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNIS  246 (327)
T ss_dssp             CCGGGCEEC------------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH
T ss_pred             eeCccccccCCccc---------cccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHHH
Confidence            99999987654322         123569999999999999999999999999999999999999998865544433343


Q ss_pred             hhccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhHHHHhccc
Q 005221          374 KKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKLIYQVGHK  445 (708)
Q Consensus       374 ~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~~f~~~~~  445 (708)
                      ..........+ ..+                     ...+.+||.+||..||++|||+.++|+||||+....
T Consensus       247 ~~~~~~~~~~~-~~~---------------------~~~~~~li~~~L~~dP~~Rpt~~~ll~h~~~~~~~~  296 (327)
T 3lm5_A          247 QVNVDYSEETF-SSV---------------------SQLATDFIQSLLVKNPEKRPTAEICLSHSWLQQWDF  296 (327)
T ss_dssp             HTCCCCCTTTT-TTS---------------------CHHHHHHHHHHSCSSGGGSCCHHHHTTCGGGCCCCT
T ss_pred             hcccccCchhh-ccc---------------------CHHHHHHHHHHcCCChhhCcCHHHHhCCHhhccccc
Confidence            33332222111 111                     146889999999999999999999999999876543


No 95 
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00  E-value=7.4e-43  Score=370.68  Aligned_cols=279  Identities=19%  Similarity=0.204  Sum_probs=205.2

Q ss_pred             CCCeEEE-EeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCCCCCCChHHHHHHHHc-CCCCCccEEEEE
Q 005221          138 SPMYRLE-RKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNTL-GGSHGVPRVHFK  215 (708)
Q Consensus       138 ~~~Y~i~-~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~~~~~~~~Ei~il~~L-~h~~~v~~~~~~  215 (708)
                      .++|++. +.||+|+||.||+|++..          +++.||||++..........+.+|+++|.++ +|+|+ +.+..+
T Consensus        11 ~~~y~i~~~~lg~G~~g~V~~~~~~~----------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i-~~~~~~   79 (316)
T 2ac3_A           11 EDVYQLQEDVLGEGAHARVQTCINLI----------TSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNV-LELIEF   79 (316)
T ss_dssp             TTSCEECCCCCCCCSSEEEEEEECSS----------SCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTB-CCEEEE
T ss_pred             ceeEEecCceecCCceEEEEEEEEcC----------CCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCe-eeEEEE
Confidence            3479995 789999999999999877          7899999999876544445678899999996 56664 555555


Q ss_pred             eeeCCEEEEEEecC-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcEEEe
Q 005221          216 GRQGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLV  294 (708)
Q Consensus       216 ~~~~~~~~lvme~~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~vkL~  294 (708)
                      +..++.+++||||+ +++|.+++.... .+++..++.++.||+.||.|||++||+||||||+|||++.++.  ...+||+
T Consensus        80 ~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~--~~~~kl~  156 (316)
T 2ac3_A           80 FEEEDRFYLVFEKMRGGSILSHIHKRR-HFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQ--VSPVKIC  156 (316)
T ss_dssp             EEETTEEEEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESCSSS--SCSEEEC
T ss_pred             EeeCCEEEEEEEcCCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEEccCCC--cCceEEE
Confidence            67788999999999 899999998764 6999999999999999999999999999999999999987662  2359999


Q ss_pred             ccCccccccCCCCCccccccCCCceeeccccccchhhhcC-----CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCch
Q 005221          295 DLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLG-----RTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKG  369 (708)
Q Consensus       295 DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~-----~~~s~~~DIwSlGviL~eLltG~~Pf~~~~~~~~~  369 (708)
                      |||++............. .......+||+.|+|||++.+     ..++.++|||||||+||+|++|++||.+....+..
T Consensus       157 Dfg~~~~~~~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~  235 (316)
T 2ac3_A          157 DFDLGSGIKLNGDCSPIS-TPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCG  235 (316)
T ss_dssp             CTTCCC--------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSC
T ss_pred             EccCccccccCCcccccc-ccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCccccccccc
Confidence            999998764322111100 011224569999999999875     55789999999999999999999999876544321


Q ss_pred             hhhhhhccCCCCCCccCCCChHHHHHHHHHHcCCCCCcc-----cHHHHHHHHHhhhCCCCCCCCcchHHHHhHHHHhc
Q 005221          370 FLVCKKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEP-----NYAKYISLFDGIVGPNPDIRPISTEGAQKLIYQVG  443 (708)
Q Consensus       370 ~~i~~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP-----~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~~f~~~  443 (708)
                      +..            ...++.....+...+....+....     -...+.+||.+||..||.+|||+.|+|+||||+..
T Consensus       236 ~~~------------~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~~~~  302 (316)
T 2ac3_A          236 WDR------------GEACPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQGC  302 (316)
T ss_dssp             C----------------CCHHHHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSTTCC--
T ss_pred             ccc------------cccchhHHHHHHHHHhccCcccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcChhhcCC
Confidence            110            011222223333333333222110     12578999999999999999999999999998754


No 96 
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00  E-value=6.4e-43  Score=378.82  Aligned_cols=282  Identities=14%  Similarity=0.170  Sum_probs=207.6

Q ss_pred             CCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCCCC-----------CCChHHHHHHHHcCCC
Q 005221          138 SPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCN-----------YGPPYEWQVYNTLGGS  206 (708)
Q Consensus       138 ~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~~~-----------~~~~~Ei~il~~L~h~  206 (708)
                      .++|++++.||+|+||.||+|++.           .+..||||++........           ..+.+|+.+|++|+|+
T Consensus        21 ~~~y~~~~~lg~G~~g~V~~~~~~-----------~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~   89 (362)
T 3pg1_A           21 QSPYTVQRFISSGSYGAVCAGVDS-----------EGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHP   89 (362)
T ss_dssp             TCSCEEEEEEEEETTEEEEEEECT-----------TSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCT
T ss_pred             ccceEEeEEeccCCCEEEEEEECC-----------CCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCc
Confidence            457999999999999999999874           378999999876533211           3467899999999999


Q ss_pred             CCccEEEEEee----eCCEEEEEEecCCCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCC
Q 005221          207 HGVPRVHFKGR----QGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGP  282 (708)
Q Consensus       207 ~~v~~~~~~~~----~~~~~~lvme~~ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~  282 (708)
                      |++..+..+..    ....+|+|||+++++|.+.+......+++..++.++.||+.||.|||++||+||||||+|||++.
T Consensus        90 ~iv~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~  169 (362)
T 3pg1_A           90 NILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLAD  169 (362)
T ss_dssp             TBCCCSEEEEECCTTTCCEEEEEEECCSEEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECT
T ss_pred             CccceeeeEEeccCCCcceEEEEEccCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCcCEecCCChHHEEEcC
Confidence            98887776643    33489999999999999999887778999999999999999999999999999999999999988


Q ss_pred             CCCCCCCcEEEeccCccccccCCCCCccccccCCCceeeccccccchhhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCC
Q 005221          283 PGTPDEKKLFLVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLG-RTGSRRDDLESLAYTLIFLLRGRLPWQ  361 (708)
Q Consensus       283 ~g~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~-~~~s~~~DIwSlGviL~eLltG~~Pf~  361 (708)
                      ++     .+||+|||+++.......         ....+||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.
T Consensus       170 ~~-----~~kl~Dfg~~~~~~~~~~---------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~  235 (362)
T 3pg1_A          170 NN-----DITICDFNLAREDTADAN---------KTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFR  235 (362)
T ss_dssp             TC-----CEEECCTTC------------------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCC
T ss_pred             CC-----CEEEEecCcccccccccc---------cceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCC
Confidence            77     599999999985443322         123569999999999987 678999999999999999999999999


Q ss_pred             CCCCCCchhhhhhhccCCCCCCccCCCChHHHHHHHHHHcCCCCCc-----c-cHHHHHHHHHhhhCCCCCCCCcchHHH
Q 005221          362 GYQGENKGFLVCKKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEE-----P-NYAKYISLFDGIVGPNPDIRPISTEGA  435 (708)
Q Consensus       362 ~~~~~~~~~~i~~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~r-----P-~~~~l~~LL~~mL~~dP~~Rps~~e~l  435 (708)
                      +....+....+......+....+..........++.......+...     + ....+.+||.+||..||++|||+.|+|
T Consensus       236 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell  315 (362)
T 3pg1_A          236 GSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQAL  315 (362)
T ss_dssp             CSSHHHHHHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             CCCHHHHHHHHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHH
Confidence            8665444444433322222111111112222222211111111110     0 125689999999999999999999999


Q ss_pred             HhHHHHhcc
Q 005221          436 QKLIYQVGH  444 (708)
Q Consensus       436 ~h~~f~~~~  444 (708)
                      +||||+...
T Consensus       316 ~hp~f~~~~  324 (362)
T 3pg1_A          316 RHPYFESLF  324 (362)
T ss_dssp             TSGGGTTTC
T ss_pred             cCchhhhcc
Confidence            999997654


No 97 
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00  E-value=1.4e-42  Score=372.84  Aligned_cols=261  Identities=19%  Similarity=0.183  Sum_probs=211.3

Q ss_pred             CCCCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCC---CCCCCChHHHHHHHHcCCCCCccEE
Q 005221          136 GGSPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSK---GCNYGPPYEWQVYNTLGGSHGVPRV  212 (708)
Q Consensus       136 ~~~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~---~~~~~~~~Ei~il~~L~h~~~v~~~  212 (708)
                      ....+|++++.||+|+||.||+|++..          +++.||+|++.....   .....+.+|+.+++.|+|+|++..+
T Consensus        38 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~----------~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~  107 (335)
T 2owb_A           38 RSRRRYVRGRFLGKGGFAKCFEISDAD----------TKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH  107 (335)
T ss_dssp             TTTEEEEEEEEEEEETTEEEEEEEETT----------TCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEE
T ss_pred             ccCCceEEEEEEeeCCCeEEEEEEECC----------CCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEE
Confidence            345689999999999999999999977          788999999876522   1223467899999999998866654


Q ss_pred             EEEeeeCCEEEEEEecC-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcE
Q 005221          213 HFKGRQGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKL  291 (708)
Q Consensus       213 ~~~~~~~~~~~lvme~~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~v  291 (708)
                       .++...+.+++||||+ +++|.+++.... .+++..++.++.||+.||.|||++||+||||||+|||++.++     .+
T Consensus       108 -~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~-----~~  180 (335)
T 2owb_A          108 -GFFEDNDFVFVVLELCRRRSLLELHKRRK-ALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDL-----EV  180 (335)
T ss_dssp             -EEEECSSEEEEEECCCTTCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTC-----CE
T ss_pred             -EEEecCCeEEEEEecCCCCCHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHHCCCEecCCCchhEEEcCCC-----CE
Confidence             4456788999999999 789999887654 699999999999999999999999999999999999999877     59


Q ss_pred             EEeccCccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCchhh
Q 005221          292 FLVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFL  371 (708)
Q Consensus       292 kL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLltG~~Pf~~~~~~~~~~~  371 (708)
                      ||+|||+++........        ....+||+.|+|||++.+..++.++|||||||+||+|++|+.||......+....
T Consensus       181 kl~Dfg~~~~~~~~~~~--------~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~  252 (335)
T 2owb_A          181 KIGDFGLATKVEYDGER--------KKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLR  252 (335)
T ss_dssp             EECCCTTCEECCSTTCC--------BCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHH
T ss_pred             EEeeccCceecccCccc--------ccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHHHHH
Confidence            99999999876533221        1235699999999999999999999999999999999999999987543332222


Q ss_pred             hhhhccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhHHHHhcccCC
Q 005221          372 VCKKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKLIYQVGHKRG  447 (708)
Q Consensus       372 i~~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~~f~~~~~~~  447 (708)
                      +......     ++..++                     ..+.+||.+||..||++||++.|+++|+||.......
T Consensus       253 ~~~~~~~-----~~~~~~---------------------~~~~~li~~~l~~dp~~Rps~~ell~~~~~~~~~~~~  302 (335)
T 2owb_A          253 IKKNEYS-----IPKHIN---------------------PVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIPA  302 (335)
T ss_dssp             HHHTCCC-----CCTTSC---------------------HHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHTSCCCS
T ss_pred             HhcCCCC-----CCccCC---------------------HHHHHHHHHHccCChhHCcCHHHHhcCccccCCCccc
Confidence            2222111     111111                     4678999999999999999999999999998766433


No 98 
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00  E-value=7.2e-43  Score=372.94  Aligned_cols=285  Identities=18%  Similarity=0.189  Sum_probs=213.1

Q ss_pred             CCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCCCCCCChHHHHHHHHcCCCC-----CccEE
Q 005221          138 SPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNTLGGSH-----GVPRV  212 (708)
Q Consensus       138 ~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~~~~~~~~Ei~il~~L~h~~-----~v~~~  212 (708)
                      .++|++++.||+|+||.||+|++...         +++.||||++..... ....+.+|+.+++.|+|++     .++.+
T Consensus        13 ~~~y~~~~~lg~G~~g~V~~~~~~~~---------~~~~vavK~~~~~~~-~~~~~~~e~~~l~~l~~~~~~~~~~i~~~   82 (339)
T 1z57_A           13 SARYEIVDTLGEGAFGKVVECIDHKA---------GGRHVAVKIVKNVDR-YCEAARSEIQVLEHLNTTDPNSTFRCVQM   82 (339)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTT---------TTEEEEEEEECSSHH-HHHHHHHHHHHHHHHHHHCTTCTTCBCCE
T ss_pred             cCceEEEEEEecCCCeEEEEEEecCC---------CCcEEEEEEEecCCc-hhHHHHHHHHHHHHhhhcCCCCceeeEee
Confidence            35899999999999999999998331         678999999875321 1234678999999998766     36666


Q ss_pred             EEEeeeCCEEEEEEecCCCCHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCC-----
Q 005221          213 HFKGRQGDYYVMVMDMLGPSLWDVWNNNS-HTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTP-----  286 (708)
Q Consensus       213 ~~~~~~~~~~~lvme~~ggsL~~~l~~~~-~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~-----  286 (708)
                      ..++...+.+++|||+++++|.+++...+ ..+++..++.++.||+.||+|||++||+||||||+|||++..+..     
T Consensus        83 ~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~~  162 (339)
T 1z57_A           83 LEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNP  162 (339)
T ss_dssp             EEEEEETTEEEEEEECCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCCCEEEEEC-
T ss_pred             ecccccCCcEEEEEcCCCCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeccccccccCC
Confidence            67778888999999999999999998764 368999999999999999999999999999999999999874310     


Q ss_pred             ---------CCCcEEEeccCccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHhCC
Q 005221          287 ---------DEKKLFLVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGR  357 (708)
Q Consensus       287 ---------~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLltG~  357 (708)
                               ....+||+|||+++......           ...+||+.|+|||++.+..++.++|||||||+||+|++|+
T Consensus       163 ~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~-----------~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~  231 (339)
T 1z57_A          163 KIKRDERTLINPDIKVVDFGSATYDDEHH-----------STLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGF  231 (339)
T ss_dssp             ---CEEEEESCCCEEECCCSSCEETTSCC-----------CSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSS
T ss_pred             ccccccccccCCCceEeeCcccccCcccc-----------ccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCC
Confidence                     02369999999998644322           2356999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCchhhhhhhccCCCCCC----------------ccCCCChHHHHHHHHHHcC---CCCCcccHHHHHHHHH
Q 005221          358 LPWQGYQGENKGFLVCKKKMATSPDG----------------LCCFCPAPFRQFVEYVVNL---KFDEEPNYAKYISLFD  418 (708)
Q Consensus       358 ~Pf~~~~~~~~~~~i~~~~~~~~p~~----------------l~~~~p~~~~~l~~~~~~~---~~~~rP~~~~l~~LL~  418 (708)
                      .||...+..+....+.......++..                +.. ....-..+...+...   ..........+.+||.
T Consensus       232 ~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  310 (339)
T 1z57_A          232 TVFPTHDSKEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDE-HSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQ  310 (339)
T ss_dssp             CSCCCSCHHHHHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCT-TSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHH
T ss_pred             CCCCCCChHHHHHHHHHHhCCCCHHHHhhccchhHHhhccccccc-cccccchhhhcCcchhhhcccchhhHHHHHHHHH
Confidence            99998665444333333222111100                000 001111111111110   1111112367999999


Q ss_pred             hhhCCCCCCCCcchHHHHhHHHHhcc
Q 005221          419 GIVGPNPDIRPISTEGAQKLIYQVGH  444 (708)
Q Consensus       419 ~mL~~dP~~Rps~~e~l~h~~f~~~~  444 (708)
                      +||..||.+|||+.|+++||||+...
T Consensus       311 ~~L~~dP~~Rpt~~ell~hp~f~~~~  336 (339)
T 1z57_A          311 KMLEYDPAKRITLREALKHPFFDLLK  336 (339)
T ss_dssp             HHTCSSTTTSCCHHHHTTSGGGGGGG
T ss_pred             HHhCcCcccccCHHHHhcCHHHHHHh
Confidence            99999999999999999999998644


No 99 
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00  E-value=3.7e-43  Score=376.20  Aligned_cols=260  Identities=20%  Similarity=0.228  Sum_probs=186.1

Q ss_pred             CeEEE---EeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCCCCCCChHHHHHHHHcC-CCCCccEEEEE
Q 005221          140 MYRLE---RKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNTLG-GSHGVPRVHFK  215 (708)
Q Consensus       140 ~Y~i~---~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~~~~~~~~Ei~il~~L~-h~~~v~~~~~~  215 (708)
                      +|++.   +.||+|+||.||+|++..          +++.||||++....   .....+|+.+++.+. |+| |+.+..+
T Consensus         9 ~y~~~~~~~~lG~G~~g~V~~~~~~~----------~~~~vavK~~~~~~---~~~~~~e~~~l~~l~~h~n-iv~~~~~   74 (325)
T 3kn6_A            9 HYDLDLKDKPLGEGSFSICRKCVHKK----------SNQAFAVKIISKRM---EANTQKEITALKLCEGHPN-IVKLHEV   74 (325)
T ss_dssp             HEEECTTSCCSEEETTEEEEEEEETT----------TCCEEEEEEEEGGG---HHHHHHHHHHHHHTTTCTT-BCCEEEE
T ss_pred             ccccccCCCccccCCCeEEEEEEECC----------CCCEEEEEEEChhh---hhhHHHHHHHHHHhcCCCC-eeEEEEE
Confidence            57776   789999999999999987          78999999997642   234678999999998 655 5555666


Q ss_pred             eeeCCEEEEEEecC-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcEEEe
Q 005221          216 GRQGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLV  294 (708)
Q Consensus       216 ~~~~~~~~lvme~~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~vkL~  294 (708)
                      +.++..+||||||+ |++|.+++.... .+++..++.|+.||+.||.|||++||+||||||+|||++.++  ....+||+
T Consensus        75 ~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~--~~~~~kl~  151 (325)
T 3kn6_A           75 FHDQLHTFLVMELLNGGELFERIKKKK-HFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDEN--DNLEIKII  151 (325)
T ss_dssp             EECSSEEEEEECCCCSCBHHHHHHHCS-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEC------CEEEEC
T ss_pred             EEcCCEEEEEEEccCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCHHHEEEecCC--CcccEEEe
Confidence            67888999999999 889999998764 699999999999999999999999999999999999997655  23369999


Q ss_pred             ccCccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhh
Q 005221          295 DLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCK  374 (708)
Q Consensus       295 DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLltG~~Pf~~~~~~~~~~~i~~  374 (708)
                      |||+++........        ....+||+.|+|||++.+..++.++|||||||++|+|++|++||.+........    
T Consensus       152 Dfg~a~~~~~~~~~--------~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~----  219 (325)
T 3kn6_A          152 DFGFARLKPPDNQP--------LKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCT----  219 (325)
T ss_dssp             CCTTCEECCC------------------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CC----
T ss_pred             ccccceecCCCCCc--------ccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccc----
Confidence            99999865543221        224569999999999999999999999999999999999999998754321100    


Q ss_pred             hccCCCCCCccCCCChHHHHHHHHHHcCCCCCcc-----cHHHHHHHHHhhhCCCCCCCCcchHHHHhHHHHhcc
Q 005221          375 KKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEP-----NYAKYISLFDGIVGPNPDIRPISTEGAQKLIYQVGH  444 (708)
Q Consensus       375 ~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP-----~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~~f~~~~  444 (708)
                                      ....++..+....+...+     -...+.+||.+||..||.+|||+.|+++||||+...
T Consensus       220 ----------------~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h~w~~~~~  278 (325)
T 3kn6_A          220 ----------------SAVEIMKKIKKGDFSFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYNEWLQDGS  278 (325)
T ss_dssp             ----------------CHHHHHHHHTTTCCCCCSHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTTCGGGCTTC
T ss_pred             ----------------cHHHHHHHHHcCCCCCCcccccCCCHHHHHHHHHHCCCChhHCCCHHHHhcChhhccCc
Confidence                            011122222222211111     125789999999999999999999999999987653


No 100
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00  E-value=5.8e-43  Score=394.79  Aligned_cols=260  Identities=23%  Similarity=0.243  Sum_probs=211.0

Q ss_pred             CCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCC---CCCCChHHHHHHHHcCCCCCccEEEEE
Q 005221          139 PMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKG---CNYGPPYEWQVYNTLGGSHGVPRVHFK  215 (708)
Q Consensus       139 ~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~---~~~~~~~Ei~il~~L~h~~~v~~~~~~  215 (708)
                      ++|++.+.||+|+||.||+|++..          +++.||||++......   ....+.+|+.+|++|+|+|+|..+.. 
T Consensus        26 ~~y~~~~~lg~G~~g~V~~~~~~~----------~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~-   94 (484)
T 3nyv_A           26 DRYKGQRVLGKGSFGEVILCKDKI----------TGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEF-   94 (484)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETT----------TCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEE-
T ss_pred             CceEEeeEEecCCCEEEEEEEECC----------CCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEE-
Confidence            479999999999999999999987          7899999999765322   22346789999999999886665554 


Q ss_pred             eeeCCEEEEEEecC-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcEEEe
Q 005221          216 GRQGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLV  294 (708)
Q Consensus       216 ~~~~~~~~lvme~~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~vkL~  294 (708)
                      +.....+++|||++ |++|.+.+...+ .+++..++.++.||+.||.|||++|||||||||+|||++..+  ....+||+
T Consensus        95 ~~~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~--~~~~~kl~  171 (484)
T 3nyv_A           95 FEDKGYFYLVGEVYTGGELFDEIISRK-RFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKS--KDANIRII  171 (484)
T ss_dssp             EECSSEEEEEECCCCSCBHHHHHHTCS-CCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSS--TTCCEEEC
T ss_pred             EEeCCEEEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEecCC--CCCcEEEE
Confidence            56788999999999 899999998765 699999999999999999999999999999999999996432  23369999


Q ss_pred             ccCccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhh
Q 005221          295 DLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCK  374 (708)
Q Consensus       295 DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLltG~~Pf~~~~~~~~~~~i~~  374 (708)
                      |||+++.+......         ...+||+.|+|||++.+ .++.++|||||||++|+|++|++||.+.+..+....+..
T Consensus       172 Dfg~a~~~~~~~~~---------~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~  241 (484)
T 3nyv_A          172 DFGLSTHFEASKKM---------KDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEK  241 (484)
T ss_dssp             CTTHHHHBCCCCSH---------HHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH
T ss_pred             eeeeeEEccccccc---------ccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHc
Confidence            99999876544221         23569999999999987 689999999999999999999999998665444444444


Q ss_pred             hccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhHHHHhcc
Q 005221          375 KKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKLIYQVGH  444 (708)
Q Consensus       375 ~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~~f~~~~  444 (708)
                      .......+.+. .+                     ...+.+||.+||..||.+|||+.|+|+||||+...
T Consensus       242 ~~~~~~~~~~~-~~---------------------s~~~~~li~~~L~~dp~~R~s~~e~l~h~~~~~~~  289 (484)
T 3nyv_A          242 GKYTFELPQWK-KV---------------------SESAKDLIRKMLTYVPSMRISARDALDHEWIQTYT  289 (484)
T ss_dssp             CCCCCCSGGGG-GS---------------------CHHHHHHHHHHTCSSGGGSCCHHHHHTSHHHHHHT
T ss_pred             CCCCCCCcccc-cC---------------------CHHHHHHHHHHCCCChhHCcCHHHHhhChhhcccc
Confidence            33322211110 11                     24789999999999999999999999999998654


No 101
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00  E-value=2.5e-42  Score=389.09  Aligned_cols=269  Identities=42%  Similarity=0.770  Sum_probs=220.8

Q ss_pred             CCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCCCCCCChHHHHHHHHcCCCCCccEEEEEeee
Q 005221          139 PMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNTLGGSHGVPRVHFKGRQ  218 (708)
Q Consensus       139 ~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~~~~~~~~Ei~il~~L~h~~~v~~~~~~~~~  218 (708)
                      ++|+++++||+|+||.||+|++..          +++.||||++.....  ...+.+|+.+++.|.|+++++.+..++..
T Consensus         7 ~~y~i~~~LG~G~fG~Vy~a~~~~----------~~~~vAvK~~~~~~~--~~~~~~E~~il~~L~~~~~i~~i~~~~~~   74 (483)
T 3sv0_A            7 NKFRLGRKIGSGSFGEIYLGTNIQ----------TNEEVAIKLENVKTK--HPQLLYESKIYRILQGGTGIPNVRWFGVE   74 (483)
T ss_dssp             TTEECCCCCEECSSCEEEEEEETT----------TCCEEEEEEEETTCS--SCCHHHHHHHHHHTTTSTTCCCEEEEEEE
T ss_pred             CcEEEEEEEeeCCCEEEEEEEECC----------CCcEEEEEEeccccc--cHHHHHHHHHHHHhcCCCCCCeEEEEEee
Confidence            589999999999999999999977          789999999876543  44688999999999999999999999999


Q ss_pred             CCEEEEEEecCCCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcEEEeccCc
Q 005221          219 GDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGL  298 (708)
Q Consensus       219 ~~~~~lvme~~ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~vkL~DFGl  298 (708)
                      ++..+|||||++++|.+++......+++..++.|+.||+.||.|||++|||||||||+||||+...  ....+||+|||+
T Consensus        75 ~~~~~lvme~~g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~--~~~~vkL~DFGl  152 (483)
T 3sv0_A           75 GDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGR--RANQVYIIDFGL  152 (483)
T ss_dssp             TTEEEEEEECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGG--GTTCEEECCCTT
T ss_pred             CCEEEEEEECCCCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCcceEEEecCC--CCCeEEEEeCCc
Confidence            999999999999999999987667899999999999999999999999999999999999995211  122699999999


Q ss_pred             cccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCchh---hhhhh
Q 005221          299 ATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGF---LVCKK  375 (708)
Q Consensus       299 a~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLltG~~Pf~~~~~~~~~~---~i~~~  375 (708)
                      ++.+..........+ ......+||+.|+|||++.+..++.++|||||||+||+|++|+.||.+........   .+...
T Consensus       153 a~~~~~~~~~~~~~~-~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~  231 (483)
T 3sv0_A          153 AKKYRDTSTHQHIPY-RENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEK  231 (483)
T ss_dssp             CEECBCTTTCCBCCC-CCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHH
T ss_pred             ceeccCCcccccccc-ccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhc
Confidence            998776544333222 22335779999999999999999999999999999999999999999866544322   23333


Q ss_pred             ccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhC
Q 005221          376 KMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVG  422 (708)
Q Consensus       376 ~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~  422 (708)
                      ......+.++..+|..+.+++..|+..++.+||++.+++++|+.++.
T Consensus       232 ~~~~~~~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~  278 (483)
T 3sv0_A          232 KVATSIEALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFI  278 (483)
T ss_dssp             HHHSCHHHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHH
T ss_pred             cccccHHHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHH
Confidence            33333344556677777777777777777777777777777777654


No 102
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00  E-value=6.3e-43  Score=382.35  Aligned_cols=278  Identities=20%  Similarity=0.209  Sum_probs=206.9

Q ss_pred             CCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCCCCCCChHHHHHHHHcC--------CCCCc
Q 005221          138 SPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNTLG--------GSHGV  209 (708)
Q Consensus       138 ~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~~~~~~~~Ei~il~~L~--------h~~~v  209 (708)
                      .++|+++++||+|+||+||+|++..          +++.||||++..... ....+.+|+.+|+.|+        |+|++
T Consensus        36 ~~~y~~~~~lg~G~~g~V~~~~~~~----------~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~~~~~~~iv  104 (397)
T 1wak_A           36 NGRYHVIRKLGWGHFSTVWLSWDIQ----------GKKFVAMKVVKSAEH-YTETALDEIRLLKSVRNSDPNDPNREMVV  104 (397)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETT----------TTEEEEEEEECSCHH-HHHHHHHHHHHHHHHHHSCTTCGGGGGBC
T ss_pred             CCeEEEEEEeeecCCeeEEEEEecC----------CCeEEEEEEEecCCc-chHHHHHHHHHHHHHhhcCCCCCCcceee
Confidence            4689999999999999999999977          789999999875421 1234678999999997        44455


Q ss_pred             cEEEEEee---eCCEEEEEEecCCCCHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHhC-CceecCCCCCcEEeCCCC
Q 005221          210 PRVHFKGR---QGDYYVMVMDMLGPSLWDVWNNNS-HTMSIEMVACIAIEAISILEKMHSK-GYVHGDVKPENFLLGPPG  284 (708)
Q Consensus       210 ~~~~~~~~---~~~~~~lvme~~ggsL~~~l~~~~-~~l~~~~~~~i~~qil~aL~yLH~~-gIvHrDIKP~NILl~~~g  284 (708)
                      ..+..+..   .+.++|||||+++++|.+.+.... ..+++..++.|+.||+.||.|||++ |||||||||+||||+.++
T Consensus       105 ~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~givHrDikp~NIll~~~~  184 (397)
T 1wak_A          105 QLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNE  184 (397)
T ss_dssp             CEEEEEEEEETTEEEEEEEECCCCCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSGGGEEECCCH
T ss_pred             eeecceeecCCCCceEEEEEeccCccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHeeEeccc
Confidence            55554432   456899999999999999887653 5799999999999999999999999 999999999999998664


Q ss_pred             C--------------------------------------------CCCCcEEEeccCccccccCCCCCccccccCCCcee
Q 005221          285 T--------------------------------------------PDEKKLFLVDLGLATKWRDSTTGMHVEYDQRPDVF  320 (708)
Q Consensus       285 ~--------------------------------------------~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~  320 (708)
                      .                                            .....+||+|||+++......           ...
T Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~~-----------~~~  253 (397)
T 1wak_A          185 QYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHF-----------TED  253 (397)
T ss_dssp             HHHHHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBCS-----------CSC
T ss_pred             hhhhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccccC-----------ccC
Confidence            0                                            011269999999998765432           134


Q ss_pred             eccccccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCchh------hhhhhccCCCCC------------
Q 005221          321 RGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGF------LVCKKKMATSPD------------  382 (708)
Q Consensus       321 ~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLltG~~Pf~~~~~~~~~~------~i~~~~~~~~p~------------  382 (708)
                      +||+.|+|||++.+..++.++|||||||+||+|++|++||.+.+......      .+..... ..+.            
T Consensus       254 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~  332 (397)
T 1wak_A          254 IQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLG-KVPRKLIVAGKYSKEF  332 (397)
T ss_dssp             CSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHC-SCCHHHHHHCTTGGGT
T ss_pred             CCCCcccCChhhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcC-CCChHHhhcccccccc
Confidence            59999999999999999999999999999999999999998766543211      1111111 1100            


Q ss_pred             --------CccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhHHHH
Q 005221          383 --------GLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKLIYQ  441 (708)
Q Consensus       383 --------~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~~f~  441 (708)
                              .+....+..+...+...   -.........+.+||.+||..||++|||+.|+|+||||+
T Consensus       333 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~  396 (397)
T 1wak_A          333 FTKKGDLKHITKLKPWGLFEVLVEK---YEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHPWLN  396 (397)
T ss_dssp             BCTTSSBSSCCCCCCCCHHHHHHHT---SCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTSGGGG
T ss_pred             cCCccccccccccCCcchhHhhhhh---cccchhhHHHHHHHHHHHhccChhhcCCHHHHhhCcccc
Confidence                    01111111111111111   011111235789999999999999999999999999985


No 103
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00  E-value=2.2e-42  Score=366.14  Aligned_cols=273  Identities=19%  Similarity=0.196  Sum_probs=202.1

Q ss_pred             CCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCC--CCCCChHHHHHHHHcCCCCCccEEEEEe
Q 005221          139 PMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKG--CNYGPPYEWQVYNTLGGSHGVPRVHFKG  216 (708)
Q Consensus       139 ~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~--~~~~~~~Ei~il~~L~h~~~v~~~~~~~  216 (708)
                      ++|+++++||+|+||.||+|++..          +++.||||++......  ....+.+|+.+++.++|+|++..+.. .
T Consensus         3 ~~y~~~~~lg~G~~g~V~~~~~~~----------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~-~   71 (311)
T 4agu_A            3 EKYEKIGKIGEGSYGVVFKCRNRD----------TGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEV-F   71 (311)
T ss_dssp             CCEEEEEEEEECSSEEEEEEEETT----------TCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEE-E
T ss_pred             ccceEeeEEeecCCeEEEEEEeCC----------CCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhhe-e
Confidence            579999999999999999999977          7899999988665322  12345689999999999886665555 4


Q ss_pred             eeCCEEEEEEecC-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcEEEec
Q 005221          217 RQGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVD  295 (708)
Q Consensus       217 ~~~~~~~lvme~~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~vkL~D  295 (708)
                      ...+.+++||||+ +++|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||++.++     .+||+|
T Consensus        72 ~~~~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~i~~~l~~~l~~lH~~~ivH~dlkp~Nil~~~~~-----~~kl~D  145 (311)
T 4agu_A           72 RRKRRLHLVFEYCDHTVLHELDRYQ-RGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILITKHS-----VIKLCD  145 (311)
T ss_dssp             EETTEEEEEEECCSEEHHHHHHHTS-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTS-----CEEECC
T ss_pred             ecCCeEEEEEEeCCCchHHHHHhhh-cCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCChhhEEEcCCC-----CEEEee
Confidence            6788899999999 55565555544 4799999999999999999999999999999999999998877     599999


Q ss_pred             cCccccccCCCCCccccccCCCceeeccccccchhhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhh
Q 005221          296 LGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLG-RTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCK  374 (708)
Q Consensus       296 FGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~-~~~s~~~DIwSlGviL~eLltG~~Pf~~~~~~~~~~~i~~  374 (708)
                      ||++.........        ....+||+.|+|||++.+ ..++.++|||||||++|+|++|++||.+....+....+..
T Consensus       146 fg~~~~~~~~~~~--------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~  217 (311)
T 4agu_A          146 FGFARLLTGPSDY--------YDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRK  217 (311)
T ss_dssp             CTTCEECC--------------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHH
T ss_pred             CCCchhccCcccc--------cCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence            9999876543221        123569999999999987 5689999999999999999999999998765554444433


Q ss_pred             hccCCCCCCccCCCChHHHHHHHHHHc------CCCCC-------cc-cHHHHHHHHHhhhCCCCCCCCcchHHHHhHHH
Q 005221          375 KKMATSPDGLCCFCPAPFRQFVEYVVN------LKFDE-------EP-NYAKYISLFDGIVGPNPDIRPISTEGAQKLIY  440 (708)
Q Consensus       375 ~~~~~~p~~l~~~~p~~~~~l~~~~~~------~~~~~-------rP-~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~~f  440 (708)
                      ......+         ...........      .++..       .+ -...+.+||.+||..||++|||+.|+|+||||
T Consensus       218 ~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f  288 (311)
T 4agu_A          218 TLGDLIP---------RHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYF  288 (311)
T ss_dssp             HHCSCCH---------HHHHHHHTCGGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTSGGG
T ss_pred             Hhccccc---------ccccccccccccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcChHH
Confidence            3221111         00000000000      00000       01 12468999999999999999999999999999


Q ss_pred             Hhccc
Q 005221          441 QVGHK  445 (708)
Q Consensus       441 ~~~~~  445 (708)
                      +....
T Consensus       289 ~~~~~  293 (311)
T 4agu_A          289 ENIRE  293 (311)
T ss_dssp             TTCC-
T ss_pred             HhccC
Confidence            86543


No 104
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00  E-value=2e-42  Score=368.58  Aligned_cols=277  Identities=17%  Similarity=0.163  Sum_probs=204.0

Q ss_pred             CCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCC-CCCCCChHHHHHHHHcCCCCCccEEEEEe
Q 005221          138 SPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSK-GCNYGPPYEWQVYNTLGGSHGVPRVHFKG  216 (708)
Q Consensus       138 ~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~-~~~~~~~~Ei~il~~L~h~~~v~~~~~~~  216 (708)
                      .++|++.+.||+|+||.||+|++..          +++.||||++..... .....+.+|+++|++|+|+|++..+..+.
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~----------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~   77 (319)
T 4euu_A            8 NHLWLLSDILGQGATANVFRGRHKK----------TGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEE   77 (319)
T ss_dssp             SEEEEEEEEEEECSSEEEEEEEETT----------TCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEE
T ss_pred             CCCEEEEEEecCCCCeEEEEEEECC----------CCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEee
Confidence            4589999999999999999999977          789999999876432 22334668999999999999877776654


Q ss_pred             ee-CCEEEEEEecC-CCCHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcEE
Q 005221          217 RQ-GDYYVMVMDML-GPSLWDVWNNNS--HTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLF  292 (708)
Q Consensus       217 ~~-~~~~~lvme~~-ggsL~~~l~~~~--~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~vk  292 (708)
                      .. ...++|||||+ +++|.+++....  ..+++..++.++.||+.||.|||++|||||||||+|||+....+ ....+|
T Consensus        78 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~-~~~~~k  156 (319)
T 4euu_A           78 ETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGED-GQSVYK  156 (319)
T ss_dssp             CTTTCCEEEEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEECTT-SCEEEE
T ss_pred             cCCCceEEEEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEeccCC-CCceEE
Confidence            33 34889999999 899999998653  24999999999999999999999999999999999999822111 223699


Q ss_pred             EeccCccccccCCCCCccccccCCCceeeccccccchhhhc--------CCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q 005221          293 LVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHL--------GRTGSRRDDLESLAYTLIFLLRGRLPWQGYQ  364 (708)
Q Consensus       293 L~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~--------~~~~s~~~DIwSlGviL~eLltG~~Pf~~~~  364 (708)
                      |+|||+++........         ...+||+.|+|||++.        +..++.++|||||||+||+|++|+.||....
T Consensus       157 L~Dfg~a~~~~~~~~~---------~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~  227 (319)
T 4euu_A          157 LTDFGAARELEDDEQF---------VSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFE  227 (319)
T ss_dssp             ECCCTTCEECCTTCCB---------CCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTT
T ss_pred             EccCCCceecCCCCce---------eecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence            9999999876554321         2356999999999986        5788999999999999999999999998655


Q ss_pred             CCCchhhhhhhccCCCCC-CccCCCChHHHHHHHHHHc--CCCC-----CcccHHHHHHHHHhhhCCCCCCCCcchHHHH
Q 005221          365 GENKGFLVCKKKMATSPD-GLCCFCPAPFRQFVEYVVN--LKFD-----EEPNYAKYISLFDGIVGPNPDIRPISTEGAQ  436 (708)
Q Consensus       365 ~~~~~~~i~~~~~~~~p~-~l~~~~p~~~~~l~~~~~~--~~~~-----~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~  436 (708)
                      .......+........|. .+... .    .....++.  ....     ...-...+.+||.+||..||++|||+.|+|+
T Consensus       228 ~~~~~~~~~~~~~~~~p~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~  302 (319)
T 4euu_A          228 GPRRNKEVMYKIITGKPSGAISGV-Q----KAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFA  302 (319)
T ss_dssp             CGGGCHHHHHHHHHHCCTTCCEEE-E----CSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHH
T ss_pred             ccchhHHHHHHHhcCCCcccchhh-h----cccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhh
Confidence            433222222221111111 00000 0    00000000  0000     0001246889999999999999999999999


Q ss_pred             hHH
Q 005221          437 KLI  439 (708)
Q Consensus       437 h~~  439 (708)
                      ||-
T Consensus       303 h~~  305 (319)
T 4euu_A          303 ETS  305 (319)
T ss_dssp             HHH
T ss_pred             ccH
Confidence            985


No 105
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00  E-value=1.1e-42  Score=380.68  Aligned_cols=279  Identities=19%  Similarity=0.245  Sum_probs=211.6

Q ss_pred             CCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCCCCCCChHHHHHHHHcCCCCC-----ccEE
Q 005221          138 SPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNTLGGSHG-----VPRV  212 (708)
Q Consensus       138 ~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~~~~~~~~Ei~il~~L~h~~~-----v~~~  212 (708)
                      .++|++++.||+|+||.||+|++..          +++.||||++..... ....+.+|+.+++.+.++++     ++.+
T Consensus        53 ~~~y~~~~~lG~G~~g~V~~~~~~~----------~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~~~~~~~~~~iv~~  121 (382)
T 2vx3_A           53 MDRYEIDSLIGKGSFGQVVKAYDRV----------EQEWVAIKIIKNKKA-FLNQAQIEVRLLELMNKHDTEMKYYIVHL  121 (382)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETT----------TTEEEEEEEECSSHH-HHHHHHHHHHHHHHHHHCSSGGGGGBCCE
T ss_pred             eeeEEEEEEEeecCCEEEEEEEEcC----------CCcEEEEEEEeccHH-HHHHHHHHHHHHHHHHhcccccceeEEEe
Confidence            3589999999999999999999977          789999999974321 12345679999999975552     6667


Q ss_pred             EEEeeeCCEEEEEEecCCCCHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHH--hCCceecCCCCCcEEeCCCCCCCCC
Q 005221          213 HFKGRQGDYYVMVMDMLGPSLWDVWNNNS-HTMSIEMVACIAIEAISILEKMH--SKGYVHGDVKPENFLLGPPGTPDEK  289 (708)
Q Consensus       213 ~~~~~~~~~~~lvme~~ggsL~~~l~~~~-~~l~~~~~~~i~~qil~aL~yLH--~~gIvHrDIKP~NILl~~~g~~~~~  289 (708)
                      ...+...+.+|||||+++++|.+++.... ..+++..++.++.||+.||.|||  +.|||||||||+||||+.++   ..
T Consensus       122 ~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDlkp~NIll~~~~---~~  198 (382)
T 2vx3_A          122 KRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPK---RS  198 (382)
T ss_dssp             EEEEEETTEEEEEEECCCCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTSTTTCEECCCCSGGGEEESSTT---SC
T ss_pred             eeeeccCCceEEEEecCCCCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccCCCCEEcCCCCcccEEEecCC---CC
Confidence            77778889999999999999999998754 46999999999999999999999  57999999999999996432   12


Q ss_pred             cEEEeccCccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCch
Q 005221          290 KLFLVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKG  369 (708)
Q Consensus       290 ~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLltG~~Pf~~~~~~~~~  369 (708)
                      .+||+|||+|+......           ...+||+.|+|||++.+..++.++|||||||+||+|++|++||.+.+..+..
T Consensus       199 ~~kL~DFG~a~~~~~~~-----------~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~  267 (382)
T 2vx3_A          199 AIKIVDFGSSCQLGQRI-----------YQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQM  267 (382)
T ss_dssp             CEEECCCTTCEETTCCC-----------CSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH
T ss_pred             cEEEEeccCceeccccc-----------ccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence            69999999998764432           2356999999999999999999999999999999999999999987665554


Q ss_pred             hhhhhhccCCCCCCccCCCChHHHHHHH----------------------------HHHcCCC------------CCccc
Q 005221          370 FLVCKKKMATSPDGLCCFCPAPFRQFVE----------------------------YVVNLKF------------DEEPN  409 (708)
Q Consensus       370 ~~i~~~~~~~~p~~l~~~~p~~~~~l~~----------------------------~~~~~~~------------~~rP~  409 (708)
                      ..+...... .+..+....|. ...++.                            ..+....            .....
T Consensus       268 ~~i~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  345 (382)
T 2vx3_A          268 NKIVEVLGI-PPAHILDQAPK-ARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVAD  345 (382)
T ss_dssp             HHHHHHHCS-CCHHHHTTCTT-HHHHEEECTTSCEEECCCCTTCCCSCCTTCSCHHHHHTTTTTSGGGTTTTCTTCCHHH
T ss_pred             HHHHHHhCC-CCHHHHHhhHH-HHHHHHhccccccccccccccccccCCcchhhHHHHhhccccCCCccccccccccchh
Confidence            444443222 12111111111 111110                            0010000            00012


Q ss_pred             HHHHHHHHHhhhCCCCCCCCcchHHHHhHHHHhc
Q 005221          410 YAKYISLFDGIVGPNPDIRPISTEGAQKLIYQVG  443 (708)
Q Consensus       410 ~~~l~~LL~~mL~~dP~~Rps~~e~l~h~~f~~~  443 (708)
                      ...+++||.+||..||++|||+.|+|+||||+..
T Consensus       346 ~~~~~dli~~mL~~dP~~Rpta~e~L~hp~f~~~  379 (382)
T 2vx3_A          346 YLKFKDLILRMLDYDPKTRIQPYYALQHSFFKKT  379 (382)
T ss_dssp             HHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGCC-
T ss_pred             hHHHHHHHHHhcCCChhhCCCHHHHhcCcccccC
Confidence            3478999999999999999999999999998653


No 106
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00  E-value=2.8e-42  Score=373.10  Aligned_cols=254  Identities=22%  Similarity=0.218  Sum_probs=207.2

Q ss_pred             CCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCCC---CCCChHHHHHHHHcCCCCCccEEEEE
Q 005221          139 PMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGC---NYGPPYEWQVYNTLGGSHGVPRVHFK  215 (708)
Q Consensus       139 ~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~~---~~~~~~Ei~il~~L~h~~~v~~~~~~  215 (708)
                      .+|++++.||+|+||.||+|++..          +++.||||++.......   ...+.+|+.+|+.|+|+|++..+.. 
T Consensus        54 ~~y~~~~~lG~G~~g~Vy~a~~~~----------~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~-  122 (348)
T 1u5q_A           54 KLFSDLREIGHGSFGAVYFARDVR----------NSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGC-  122 (348)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETT----------TTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEE-
T ss_pred             hheeeeeEEccCCCEEEEEEEEcc----------CCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEE-
Confidence            359999999999999999999877          78999999997653221   1346789999999999987665554 


Q ss_pred             eeeCCEEEEEEecCCCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcEEEec
Q 005221          216 GRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVD  295 (708)
Q Consensus       216 ~~~~~~~~lvme~~ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~vkL~D  295 (708)
                      +..++..+|||||+.|+|.+++......+++..++.++.||+.||.|||++||+||||||+||||+.++     .+||+|
T Consensus       123 ~~~~~~~~lv~e~~~g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~-----~~kL~D  197 (348)
T 1u5q_A          123 YLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPG-----LVKLGD  197 (348)
T ss_dssp             EEETTEEEEEEECCSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTT-----EEEECC
T ss_pred             EEECCeEEEEEecCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCC-----CEEEee
Confidence            467789999999999999999876666899999999999999999999999999999999999998777     699999


Q ss_pred             cCccccccCCCCCccccccCCCceeeccccccchhhhc---CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCchhhh
Q 005221          296 LGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHL---GRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLV  372 (708)
Q Consensus       296 FGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~---~~~~s~~~DIwSlGviL~eLltG~~Pf~~~~~~~~~~~i  372 (708)
                      ||+++.....            ...+||+.|+|||++.   +..++.++|||||||+||+|++|++||.+.+.......+
T Consensus       198 fG~a~~~~~~------------~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~  265 (348)
T 1u5q_A          198 FGSASIMAPA------------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHI  265 (348)
T ss_dssp             CTTCBSSSSB------------CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHH
T ss_pred             ccCceecCCC------------CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Confidence            9999865432            1356999999999985   567899999999999999999999999876543333333


Q ss_pred             hhhccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhHHHHhcc
Q 005221          373 CKKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKLIYQVGH  444 (708)
Q Consensus       373 ~~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~~f~~~~  444 (708)
                      .....   +......++                     ..+.+||.+||..||++|||+.++++||||....
T Consensus       266 ~~~~~---~~~~~~~~~---------------------~~l~~li~~~l~~dP~~Rps~~~ll~h~~~~~~~  313 (348)
T 1u5q_A          266 AQNES---PALQSGHWS---------------------EYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRER  313 (348)
T ss_dssp             HHSCC---CCCCCTTSC---------------------HHHHHHHHHHTCSSGGGSCCHHHHTTCHHHHSCC
T ss_pred             HhcCC---CCCCCCCCC---------------------HHHHHHHHHHcccChhhCcCHHHHhhChhhhccC
Confidence            22211   111111122                     4678999999999999999999999999987654


No 107
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00  E-value=1.1e-42  Score=373.86  Aligned_cols=266  Identities=21%  Similarity=0.224  Sum_probs=206.0

Q ss_pred             CCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCC-----CCCCCCChHHHHHHHHcCCCCCccEEE
Q 005221          139 PMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSS-----KGCNYGPPYEWQVYNTLGGSHGVPRVH  213 (708)
Q Consensus       139 ~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~-----~~~~~~~~~Ei~il~~L~h~~~v~~~~  213 (708)
                      ++|++++.||+|+||.||+|++..          ++..||+|++....     ......+.+|+.+|+.|+|+|++..+.
T Consensus        26 ~~y~~~~~lG~G~~g~V~~~~~~~----------~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~   95 (345)
T 3hko_A           26 KKYHLKGAIGQGSYGVVRVAIENQ----------TRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYE   95 (345)
T ss_dssp             HHEEEEEEEEECSSCEEEEEEETT----------TCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred             hheeecceeeecCCeEEEEEEECC----------CCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeeh
Confidence            479999999999999999999977          78999999987541     222345778999999999988666555


Q ss_pred             EEeeeCCEEEEEEecC-CCCHHHHHhcc---------------------------------------CCCCCHHHHHHHH
Q 005221          214 FKGRQGDYYVMVMDML-GPSLWDVWNNN---------------------------------------SHTMSIEMVACIA  253 (708)
Q Consensus       214 ~~~~~~~~~~lvme~~-ggsL~~~l~~~---------------------------------------~~~l~~~~~~~i~  253 (708)
                      . +...+.+++||||+ |++|.+++...                                       ...+++..++.|+
T Consensus        96 ~-~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  174 (345)
T 3hko_A           96 V-YEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIM  174 (345)
T ss_dssp             E-EECSSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHH
T ss_pred             h-hccCCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHH
Confidence            5 47788999999999 99999998521                                       1124678899999


Q ss_pred             HHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcEEEeccCccccccCCCCCccccccCCCceeeccccccchhhhc
Q 005221          254 IEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHL  333 (708)
Q Consensus       254 ~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~  333 (708)
                      .||+.||.|||++||+||||||+||||+.++.   ..+||+|||+++.+........    ......+||+.|+|||++.
T Consensus       175 ~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~---~~~kl~Dfg~a~~~~~~~~~~~----~~~~~~~gt~~y~aPE~~~  247 (345)
T 3hko_A          175 RQIFSALHYLHNQGICHRDIKPENFLFSTNKS---FEIKLVDFGLSKEFYKLNNGEY----YGMTTKAGTPYFVAPEVLN  247 (345)
T ss_dssp             HHHHHHHHHHHHTTEECCCCCGGGEEESCSSS---CCEEECCCTTCEEGGGTTCC------------CCCGGGCCHHHHT
T ss_pred             HHHHHHHHHHHHCCccccCCChhhEEEecCCC---ceEEEeeccccccccccCcccc----ccccccCCCccccCchhhc
Confidence            99999999999999999999999999986542   2599999999987654322211    1123456999999999997


Q ss_pred             C--CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhhccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHH
Q 005221          334 G--RTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCKKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYA  411 (708)
Q Consensus       334 ~--~~~s~~~DIwSlGviL~eLltG~~Pf~~~~~~~~~~~i~~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~  411 (708)
                      +  ..++.++|||||||+||+|++|+.||.+....+....+............ ..+                     ..
T Consensus       248 ~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~-~~~---------------------~~  305 (345)
T 3hko_A          248 TTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNY-NVL---------------------SP  305 (345)
T ss_dssp             CSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCTTSGGG-GGS---------------------CH
T ss_pred             cCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHhcccccCCccc-ccC---------------------CH
Confidence            6  67899999999999999999999999886655444433333222111110 001                     25


Q ss_pred             HHHHHHHhhhCCCCCCCCcchHHHHhHHHHhcc
Q 005221          412 KYISLFDGIVGPNPDIRPISTEGAQKLIYQVGH  444 (708)
Q Consensus       412 ~l~~LL~~mL~~dP~~Rps~~e~l~h~~f~~~~  444 (708)
                      .+.+||.+||..||.+||++.|+|+||||+...
T Consensus       306 ~~~~li~~~l~~~p~~Rps~~~~l~hp~~~~~~  338 (345)
T 3hko_A          306 LARDLLSNLLNRNVDERFDAMRALQHPWISQFS  338 (345)
T ss_dssp             HHHHHHHHHSCSCTTTSCCHHHHHHSHHHHTTS
T ss_pred             HHHHHHHHHcCCChhHCCCHHHHhcChhhccCh
Confidence            789999999999999999999999999998654


No 108
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00  E-value=3.2e-42  Score=364.23  Aligned_cols=260  Identities=18%  Similarity=0.187  Sum_probs=206.2

Q ss_pred             CCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCCCCCCChHHHHHHHHcCCCCCccEEEEEeee
Q 005221          139 PMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNTLGGSHGVPRVHFKGRQ  218 (708)
Q Consensus       139 ~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~~~~~~~~Ei~il~~L~h~~~v~~~~~~~~~  218 (708)
                      ++|++++.||+|+||.||+|++..          +++.||+|++..........+.+|+.+++.|+|+|++..+. +...
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~----------~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~-~~~~   77 (304)
T 2jam_A            9 KTFIFMEVLGSGAFSEVFLVKQRL----------TGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLED-IYES   77 (304)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETT----------TCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEE-EEEC
T ss_pred             ccceeeeeccCCCCceEEEEEECC----------CCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhh-hccc
Confidence            469999999999999999999977          78999999998765444456789999999999988666554 4577


Q ss_pred             CCEEEEEEecC-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcEEEeccC
Q 005221          219 GDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLG  297 (708)
Q Consensus       219 ~~~~~lvme~~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~vkL~DFG  297 (708)
                      .+.+++|||++ +++|.+++...+ .+++..+..++.||+.||.|||++||+||||||+|||+...+  ....+||+|||
T Consensus        78 ~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dikp~NIl~~~~~--~~~~~kl~Dfg  154 (304)
T 2jam_A           78 TTHYYLVMQLVSGGELFDRILERG-VYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPE--ENSKIMITDFG  154 (304)
T ss_dssp             SSEEEEEECCCCSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHTTCCCCSCCGGGCEESSSS--TTCCEEBCSCS
T ss_pred             CCEEEEEEEcCCCccHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEecCC--CCCCEEEccCC
Confidence            88999999999 889999987665 699999999999999999999999999999999999994321  22369999999


Q ss_pred             ccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhhcc
Q 005221          298 LATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCKKKM  377 (708)
Q Consensus       298 la~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLltG~~Pf~~~~~~~~~~~i~~~~~  377 (708)
                      +++......          ....+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.........+.....
T Consensus       155 ~~~~~~~~~----------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~  224 (304)
T 2jam_A          155 LSKMEQNGI----------MSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYY  224 (304)
T ss_dssp             TTCCCCCBT----------THHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHCCC
T ss_pred             cceecCCCc----------cccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCC
Confidence            997543321          1235699999999999999999999999999999999999999987554333333332222


Q ss_pred             CCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhHHHHhcc
Q 005221          378 ATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKLIYQVGH  444 (708)
Q Consensus       378 ~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~~f~~~~  444 (708)
                      .... .....+                     ...+.+||.+||..||++||++.|+++||||....
T Consensus       225 ~~~~-~~~~~~---------------------~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~  269 (304)
T 2jam_A          225 EFES-PFWDDI---------------------SESAKDFICHLLEKDPNERYTCEKALSHPWIDGNT  269 (304)
T ss_dssp             CCCT-TTTTTS---------------------CHHHHHHHHHHHCSSTTTSCCHHHHHTSHHHHSSC
T ss_pred             CCCc-cccccC---------------------CHHHHHHHHHHcCCChhHCcCHHHHhcCccccCCC
Confidence            1111 111111                     14788999999999999999999999999997643


No 109
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00  E-value=1.1e-42  Score=374.15  Aligned_cols=283  Identities=18%  Similarity=0.171  Sum_probs=212.2

Q ss_pred             CCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCc-cEEEEEEeecCCCCCCCCChHHHHHHHHcCCCCC-----ccE
Q 005221          138 SPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGA-VEVALKFEHRSSKGCNYGPPYEWQVYNTLGGSHG-----VPR  211 (708)
Q Consensus       138 ~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~-~~VAlK~~~~~~~~~~~~~~~Ei~il~~L~h~~~-----v~~  211 (708)
                      .++|++++.||+|+||.||+|++..          ++ ..||||++..... ....+.+|+.+++.|+|++.     +..
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~~----------~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~~~~~~~~   86 (355)
T 2eu9_A           18 QERYEIVGNLGEGTFGKVVECLDHA----------RGKSQVALKIIRNVGK-YREAARLEINVLKKIKEKDKENKFLCVL   86 (355)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETT----------TTTEEEEEEEECSCHH-HHHHHHHHHHHHHHHHHHCTTSCSCBCC
T ss_pred             cccEEEEEEeeccCCeEEEEEEecC----------CCceEEEEEEEccccc-chhHHHHHHHHHHHHhhcCCCCceeEEE
Confidence            4589999999999999999999876          44 7899999875321 23346779999999987663     666


Q ss_pred             EEEEeeeCCEEEEEEecCCCCHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCC-----
Q 005221          212 VHFKGRQGDYYVMVMDMLGPSLWDVWNNNS-HTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGT-----  285 (708)
Q Consensus       212 ~~~~~~~~~~~~lvme~~ggsL~~~l~~~~-~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~-----  285 (708)
                      +..+....+.++||||+++++|.+.+.... ..+++..++.++.||+.||.|||++||+||||||+||||+..+.     
T Consensus        87 ~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~  166 (355)
T 2eu9_A           87 MSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYN  166 (355)
T ss_dssp             EEEEEEETTEEEEEEECCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEESCCCEEEEEC
T ss_pred             eeeeeeeCCeEEEEEeccCCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeccccccccc
Confidence            667778888999999999999999887654 46999999999999999999999999999999999999954320     


Q ss_pred             ---------CCCCcEEEeccCccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHhC
Q 005221          286 ---------PDEKKLFLVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRG  356 (708)
Q Consensus       286 ---------~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLltG  356 (708)
                               .....+||+|||+++......           ...+||+.|+|||++.+..++.++|||||||+||+|++|
T Consensus       167 ~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~-----------~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g  235 (355)
T 2eu9_A          167 EHKSCEEKSVKNTSIRVADFGSATFDHEHH-----------TTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRG  235 (355)
T ss_dssp             CC-CCCEEEESCCCEEECCCTTCEETTSCC-----------CSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHS
T ss_pred             ccccccccccCCCcEEEeecCccccccccc-----------cCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhC
Confidence                     123469999999998644332           235699999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCchhhhhhhccCCCCCCc----------------cCCCChHHHHHHHHHHcC---CCCCcccHHHHHHHH
Q 005221          357 RLPWQGYQGENKGFLVCKKKMATSPDGL----------------CCFCPAPFRQFVEYVVNL---KFDEEPNYAKYISLF  417 (708)
Q Consensus       357 ~~Pf~~~~~~~~~~~i~~~~~~~~p~~l----------------~~~~p~~~~~l~~~~~~~---~~~~rP~~~~l~~LL  417 (708)
                      ++||.+....+....+.+... ..|..+                .......-..+...|...   ..........+.+||
T Consensus       236 ~~pf~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  314 (355)
T 2eu9_A          236 FTLFQTHENREHLVMMEKILG-PIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLM  314 (355)
T ss_dssp             SCSCCCSSHHHHHHHHHHHHC-CCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHH
T ss_pred             CCCCCCCCHHHHHHHHHHHcC-CCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHH
Confidence            999998665444333333222 111100                000011111111111111   111111235799999


Q ss_pred             HhhhCCCCCCCCcchHHHHhHHHHhc
Q 005221          418 DGIVGPNPDIRPISTEGAQKLIYQVG  443 (708)
Q Consensus       418 ~~mL~~dP~~Rps~~e~l~h~~f~~~  443 (708)
                      .+||..||++|||+.|+|+||||...
T Consensus       315 ~~~L~~dP~~Rpt~~e~l~hp~f~~~  340 (355)
T 2eu9_A          315 RRMLEFDPAQRITLAEALLHPFFAGL  340 (355)
T ss_dssp             HHHTCSSTTTSCCHHHHTTSGGGGGC
T ss_pred             HHHhcCChhhCcCHHHHhcChhhcCC
Confidence            99999999999999999999999754


No 110
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00  E-value=1.7e-42  Score=393.22  Aligned_cols=260  Identities=20%  Similarity=0.194  Sum_probs=207.2

Q ss_pred             CCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCC-------------CCCCChHHHHHHHHcCC
Q 005221          139 PMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKG-------------CNYGPPYEWQVYNTLGG  205 (708)
Q Consensus       139 ~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~-------------~~~~~~~Ei~il~~L~h  205 (708)
                      ++|+++++||+|+||.||+|++..          ++..||||++......             ....+.+|+.+|+.|+|
T Consensus        36 ~~Y~~~~~lG~G~~g~V~~~~~~~----------~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h  105 (504)
T 3q5i_A           36 ESYFKVRKLGSGAYGEVLLCKEKN----------GHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDH  105 (504)
T ss_dssp             GTEEEEEEEEC--CEEEEEEEETT----------TCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCC
T ss_pred             cceEEEeEecccCCeEEEEEEECC----------CCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCC
Confidence            579999999999999999999987          7899999998765311             12346789999999999


Q ss_pred             CCCccEEEEEeeeCCEEEEEEecC-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCC
Q 005221          206 SHGVPRVHFKGRQGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPG  284 (708)
Q Consensus       206 ~~~v~~~~~~~~~~~~~~lvme~~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g  284 (708)
                      +|+|..+. ++..+..++|||||| |++|.+++.... .+++..++.|+.||+.||.|||++||+||||||+|||++.++
T Consensus       106 pniv~~~~-~~~~~~~~~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~  183 (504)
T 3q5i_A          106 PNIIKLFD-VFEDKKYFYLVTEFYEGGELFEQIINRH-KFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKN  183 (504)
T ss_dssp             TTBCCEEE-EEECSSEEEEEEECCTTCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESSTT
T ss_pred             CCCCeEEE-EEEcCCEEEEEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCcHHHEEEecCC
Confidence            88665555 457788999999999 889999987765 699999999999999999999999999999999999998765


Q ss_pred             CCCCCcEEEeccCccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q 005221          285 TPDEKKLFLVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQ  364 (708)
Q Consensus       285 ~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLltG~~Pf~~~~  364 (708)
                        ....+||+|||+++.......         ....+||+.|+|||++.+ .++.++|||||||++|+|++|.+||.+.+
T Consensus       184 --~~~~~kl~Dfg~a~~~~~~~~---------~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~  251 (504)
T 3q5i_A          184 --SLLNIKIVDFGLSSFFSKDYK---------LRDRLGTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILLCGYPPFGGQN  251 (504)
T ss_dssp             --CCSSEEECCCTTCEECCTTSC---------BCCCCSCTTTCCHHHHTT-CBCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             --CCccEEEEECCCCEEcCCCCc---------cccccCCcCCCCHHHhcc-CCCchHHHHHHHHHHHHHHhCCCCCCCCC
Confidence              233699999999987654322         123569999999999874 68999999999999999999999999866


Q ss_pred             CCCchhhhhhhccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhHHHHhcc
Q 005221          365 GENKGFLVCKKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKLIYQVGH  444 (708)
Q Consensus       365 ~~~~~~~i~~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~~f~~~~  444 (708)
                      ..+....+...........+ ..+                     ...+.+||.+||..||.+|||+.|+|+||||+...
T Consensus       252 ~~~~~~~i~~~~~~~~~~~~-~~~---------------------s~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~~  309 (504)
T 3q5i_A          252 DQDIIKKVEKGKYYFDFNDW-KNI---------------------SDEAKELIKLMLTYDYNKRCTAEEALNSRWIKKYA  309 (504)
T ss_dssp             HHHHHHHHHHCCCCCCHHHH-TTS---------------------CHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHHTC
T ss_pred             HHHHHHHHHcCCCCCCcccc-CCC---------------------CHHHHHHHHHHcCCChhHCCCHHHHhcCHhhhhch
Confidence            55444444443322111100 001                     25789999999999999999999999999998654


No 111
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00  E-value=1.7e-42  Score=361.59  Aligned_cols=254  Identities=22%  Similarity=0.283  Sum_probs=204.9

Q ss_pred             CCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCC---CCCCCCChHHHHHHHHcCCCCCccEEEEE
Q 005221          139 PMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSS---KGCNYGPPYEWQVYNTLGGSHGVPRVHFK  215 (708)
Q Consensus       139 ~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~---~~~~~~~~~Ei~il~~L~h~~~v~~~~~~  215 (708)
                      ++|++++.||+|+||.||+|++..          ++..||+|++....   ......+.+|+.+++.++|+|++..+. +
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~----------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~-~   77 (279)
T 3fdn_A            9 EDFEIGRPLGKGKFGNVYLAREKQ----------SKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG-Y   77 (279)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETT----------TCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEE-E
T ss_pred             ccEEEeeEEecCCCeEEEEEEEcc----------CCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhh-e
Confidence            479999999999999999999977          78899999986542   122335778999999999988665555 4


Q ss_pred             eeeCCEEEEEEecC-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcEEEe
Q 005221          216 GRQGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLV  294 (708)
Q Consensus       216 ~~~~~~~~lvme~~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~vkL~  294 (708)
                      +.....+++||||+ +++|.+++.... .+++..++.++.||+.||.|||++||+||||||+|||++.++     .+||+
T Consensus        78 ~~~~~~~~lv~e~~~~~~l~~~l~~~~-~~~~~~~~~~~~qi~~~l~~LH~~~i~H~dlkp~Nili~~~~-----~~~l~  151 (279)
T 3fdn_A           78 FHDATRVYLILEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAG-----ELKIA  151 (279)
T ss_dssp             EECSSEEEEEECCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHTTTCEECCCCGGGEEECTTS-----CEEEC
T ss_pred             EecCCEEEEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCEecccCChHhEEEcCCC-----CEEEE
Confidence            56778899999999 789999987764 699999999999999999999999999999999999998877     59999


Q ss_pred             ccCccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhh
Q 005221          295 DLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCK  374 (708)
Q Consensus       295 DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLltG~~Pf~~~~~~~~~~~i~~  374 (708)
                      |||++.......          ....+||+.|+|||++.+..++.++|||||||++|+|++|+.||...........+..
T Consensus       152 Dfg~~~~~~~~~----------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~  221 (279)
T 3fdn_A          152 DFGWSVHAPSSR----------RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR  221 (279)
T ss_dssp             SCCEESCC------------------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHH
T ss_pred             eccccccCCccc----------ccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHHHHHHHh
Confidence            999986544322          1235699999999999999999999999999999999999999987544333222222


Q ss_pred             hccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhHHHHhccc
Q 005221          375 KKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKLIYQVGHK  445 (708)
Q Consensus       375 ~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~~f~~~~~  445 (708)
                      ....     ++..+                     ...+.+||.+||..||.+||++.|+++||||.....
T Consensus       222 ~~~~-----~~~~~---------------------~~~~~~li~~~l~~~p~~Rps~~e~l~h~~~~~~~~  266 (279)
T 3fdn_A          222 VEFT-----FPDFV---------------------TEGARDLISRLLKHNPSQRPMLREVLEHPWITANSS  266 (279)
T ss_dssp             TCCC-----CCTTS---------------------CHHHHHHHHHHCCSSGGGSCCHHHHHHCHHHHHHCS
T ss_pred             CCCC-----CCCcC---------------------CHHHHHHHHHHhccChhhCCCHHHHhhCccccCCcc
Confidence            2111     11111                     146889999999999999999999999999986543


No 112
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00  E-value=4e-42  Score=367.30  Aligned_cols=279  Identities=17%  Similarity=0.209  Sum_probs=204.1

Q ss_pred             cCCCCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCCCCCCChHHHHHHHHcC-CCCCccEEE
Q 005221          135 VGGSPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNTLG-GSHGVPRVH  213 (708)
Q Consensus       135 ~~~~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~~~~~~~~Ei~il~~L~-h~~~v~~~~  213 (708)
                      .+..++|+++++||+|+||.||+|++..          +++.||||++....   ...+.+|+.+|+.|+ |+|++. +.
T Consensus        32 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~----------~~~~vavK~~~~~~---~~~~~~E~~~l~~l~~~~~i~~-~~   97 (330)
T 3nsz_A           32 WGNQDDYQLVRKLGRGKYSEVFEAINIT----------NNEKVVVKILKPVK---KKKIKREIKILENLRGGPNIIT-LA   97 (330)
T ss_dssp             CEEGGGEEEEEEEEECSSEEEEEEEETT----------TCCEEEEEEECSCC---HHHHHHHHHHHHHHTTSTTBCC-EE
T ss_pred             ccCCCceEEEEEecccCCeEEEEEEECC----------CCcEEEEEEecccc---hHHHHHHHHHHHHcCCCCCEEE-ee
Confidence            3445789999999999999999999977          78999999987542   235788999999998 655554 44


Q ss_pred             EEeee--CCEEEEEEecC-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCc
Q 005221          214 FKGRQ--GDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKK  290 (708)
Q Consensus       214 ~~~~~--~~~~~lvme~~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~  290 (708)
                      .+...  ....++|||++ +++|.+++.    .+++..++.++.||+.||.|||++||+||||||+|||++.++.    .
T Consensus        98 ~~~~~~~~~~~~lv~e~~~~~~l~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~----~  169 (330)
T 3nsz_A           98 DIVKDPVSRTPALVFEHVNNTDFKQLYQ----TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHR----K  169 (330)
T ss_dssp             EEEECTTTCCEEEEEECCCCCCHHHHGG----GCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTT----E
T ss_pred             eeeccCCCCceEEEEeccCchhHHHHHH----hCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEcCCCC----E
Confidence            44444  67899999999 789988874    3899999999999999999999999999999999999986653    6


Q ss_pred             EEEeccCccccccCCCCCccccccCCCceeeccccccchhhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCC-c
Q 005221          291 LFLVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLG-RTGSRRDDLESLAYTLIFLLRGRLPWQGYQGEN-K  368 (708)
Q Consensus       291 vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~-~~~s~~~DIwSlGviL~eLltG~~Pf~~~~~~~-~  368 (708)
                      +||+|||+++........         ...+||+.|+|||++.+ ..++.++|||||||+||+|++|+.||....... .
T Consensus       170 ~kl~Dfg~a~~~~~~~~~---------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~  240 (330)
T 3nsz_A          170 LRLIDWGLAEFYHPGQEY---------NVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQ  240 (330)
T ss_dssp             EEECCCTTCEECCTTCCC---------CSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHH
T ss_pred             EEEEeCCCceEcCCCCcc---------ccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHH
Confidence            999999999876543321         23569999999999987 678999999999999999999999996533221 1


Q ss_pred             hhhhhhhccCCCC----CCccCCCChHHHHHHHHHHcCCC-----CCcc--cHHHHHHHHHhhhCCCCCCCCcchHHHHh
Q 005221          369 GFLVCKKKMATSP----DGLCCFCPAPFRQFVEYVVNLKF-----DEEP--NYAKYISLFDGIVGPNPDIRPISTEGAQK  437 (708)
Q Consensus       369 ~~~i~~~~~~~~p----~~l~~~~p~~~~~l~~~~~~~~~-----~~rP--~~~~l~~LL~~mL~~dP~~Rps~~e~l~h  437 (708)
                      ...+.........    .......+..+..++........     ...+  -...+.+||.+||..||++|||+.|+|+|
T Consensus       241 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~h  320 (330)
T 3nsz_A          241 LVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH  320 (330)
T ss_dssp             HHHHHHHHCHHHHHHHHHHTTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred             HHHHHHhcCCchhhhHHHHhccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence            1111110000000    00000011111111111000000     0000  13689999999999999999999999999


Q ss_pred             HHHHhcc
Q 005221          438 LIYQVGH  444 (708)
Q Consensus       438 ~~f~~~~  444 (708)
                      |||+...
T Consensus       321 p~f~~~~  327 (330)
T 3nsz_A          321 PYFYTVV  327 (330)
T ss_dssp             GGGTTCC
T ss_pred             ccHhhhc
Confidence            9998654


No 113
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00  E-value=4.2e-42  Score=370.67  Aligned_cols=297  Identities=18%  Similarity=0.202  Sum_probs=216.2

Q ss_pred             cccccCCCCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCC-CCCCCChHHHHHHHHcCCCCCc
Q 005221          131 EKIAVGGSPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSK-GCNYGPPYEWQVYNTLGGSHGV  209 (708)
Q Consensus       131 ~~~~~~~~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~-~~~~~~~~Ei~il~~L~h~~~v  209 (708)
                      ..+.....++|++.+.||+|+||.||+|++..          +++.||||++..... .....+.+|+.+|+.|+|+|++
T Consensus         3 ~~~~~~i~~~y~~~~~lg~G~~g~V~~~~~~~----------~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv   72 (353)
T 2b9h_A            3 KRIVYNISSDFQLKSLLGEGAYGVVCSATHKP----------TGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENII   72 (353)
T ss_dssp             TTCCCCSCTTEEEEEEEEECSSEEEEEEEETT----------TTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred             cccccccccceEEeeEEcCCCCeEEEEEEECC----------CCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcC
Confidence            33444456789999999999999999999977          789999999864322 1122456899999999999977


Q ss_pred             cEEEEEeee----CCEEEEEEecCCCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCC
Q 005221          210 PRVHFKGRQ----GDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGT  285 (708)
Q Consensus       210 ~~~~~~~~~----~~~~~lvme~~ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~  285 (708)
                      ..+..+...    ...+++|||+++++|.+++...  .+++..++.++.||+.||.|||++||+||||||+|||++.++ 
T Consensus        73 ~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~--~~~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~Nil~~~~~-  149 (353)
T 2b9h_A           73 TIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQ--MLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNC-  149 (353)
T ss_dssp             CEEEECCCSCSTTCCCEEEEECCCSEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTC-
T ss_pred             CeeeeecccccCccceEEEEEeccCccHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEcCCC-
Confidence            776655432    3679999999999999998873  599999999999999999999999999999999999998877 


Q ss_pred             CCCCcEEEeccCccccccCCCCCcccc--ccCCCceeeccccccchhhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCC
Q 005221          286 PDEKKLFLVDLGLATKWRDSTTGMHVE--YDQRPDVFRGTVRYASVHAHLG-RTGSRRDDLESLAYTLIFLLRGRLPWQG  362 (708)
Q Consensus       286 ~~~~~vkL~DFGla~~~~~~~~~~~~~--~~~~~~~~~GT~~Y~APE~~~~-~~~s~~~DIwSlGviL~eLltG~~Pf~~  362 (708)
                          .+||+|||+++............  ........+||+.|+|||++.+ ..++.++|||||||+||+|++|++||.+
T Consensus       150 ----~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~  225 (353)
T 2b9h_A          150 ----DLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPG  225 (353)
T ss_dssp             ----CEEECCCTTCEECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             ----cEEEEecccccccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCC
Confidence                59999999998765432211100  0011224579999999998765 6789999999999999999999999998


Q ss_pred             CCCCCchhhhhhhccCCC-CCCccCCCChHHHHHHHHHHcCCCCC----cc-cHHHHHHHHHhhhCCCCCCCCcchHHHH
Q 005221          363 YQGENKGFLVCKKKMATS-PDGLCCFCPAPFRQFVEYVVNLKFDE----EP-NYAKYISLFDGIVGPNPDIRPISTEGAQ  436 (708)
Q Consensus       363 ~~~~~~~~~i~~~~~~~~-p~~l~~~~p~~~~~l~~~~~~~~~~~----rP-~~~~l~~LL~~mL~~dP~~Rps~~e~l~  436 (708)
                      .+.......+......+. ...+..........++..........    .+ -...+.+||.+||..||++|||+.|+++
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  305 (353)
T 2b9h_A          226 RDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALE  305 (353)
T ss_dssp             SSHHHHHHHHHHHHCCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             CCcHHHHHHHHHHhCCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence            765444433333222222 11122222223333332211110000    01 1257899999999999999999999999


Q ss_pred             hHHHHhcc
Q 005221          437 KLIYQVGH  444 (708)
Q Consensus       437 h~~f~~~~  444 (708)
                      ||||+...
T Consensus       306 hp~~~~~~  313 (353)
T 2b9h_A          306 HPYLQTYH  313 (353)
T ss_dssp             SGGGTTTC
T ss_pred             CccccccC
Confidence            99997644


No 114
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00  E-value=1.9e-42  Score=395.67  Aligned_cols=259  Identities=22%  Similarity=0.209  Sum_probs=208.8

Q ss_pred             CCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCC---CCCCCCChHHHHHHHHcCCCCCccEEEE
Q 005221          138 SPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSS---KGCNYGPPYEWQVYNTLGGSHGVPRVHF  214 (708)
Q Consensus       138 ~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~---~~~~~~~~~Ei~il~~L~h~~~v~~~~~  214 (708)
                      .++|++++.||+|+||.||+|++..          +++.||+|++.+..   ......+.+|+.+|+.++|+|+|..+ .
T Consensus       183 ~~~f~~~~~LG~G~fG~Vy~a~~~~----------tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~-~  251 (576)
T 2acx_A          183 KNTFRQYRVLGKGGFGEVCACQVRA----------TGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLA-Y  251 (576)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETT----------TCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEE-E
T ss_pred             ccceEEEEEEeeCCCEEEEEEEECC----------CCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEE-E
Confidence            3579999999999999999999977          78999999987642   22223467899999999998866555 4


Q ss_pred             EeeeCCEEEEEEecC-CCCHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcEE
Q 005221          215 KGRQGDYYVMVMDML-GPSLWDVWNNNS-HTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLF  292 (708)
Q Consensus       215 ~~~~~~~~~lvme~~-ggsL~~~l~~~~-~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~vk  292 (708)
                      ++.+.+.+||||||+ ||+|.+++...+ ..+++..++.++.||+.||.|||++|||||||||+||||+.++     .+|
T Consensus       252 ~~~~~~~l~lVmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIvHrDLKPeNILld~~g-----~vK  326 (576)
T 2acx_A          252 AYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHG-----HIR  326 (576)
T ss_dssp             EEECSSEEEEEECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTS-----CEE
T ss_pred             EEeeCCEEEEEEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCchheEEEeCCC-----CeE
Confidence            557788999999999 999999987654 3599999999999999999999999999999999999999877     599


Q ss_pred             EeccCccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCchhhh
Q 005221          293 LVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLV  372 (708)
Q Consensus       293 L~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLltG~~Pf~~~~~~~~~~~i  372 (708)
                      |+|||+|+.......         ....+||+.|+|||++.+..++.++|||||||+||+|++|++||.+.........+
T Consensus       327 L~DFGla~~~~~~~~---------~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i  397 (576)
T 2acx_A          327 ISDLGLAVHVPEGQT---------IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEV  397 (576)
T ss_dssp             ECCCTTCEECCTTCC---------EECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHH
T ss_pred             EEecccceecccCcc---------ccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHH
Confidence            999999987654322         12357999999999999999999999999999999999999999875543222222


Q ss_pred             hhhccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCC-----cchHHHHhHHHHhc
Q 005221          373 CKKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRP-----ISTEGAQKLIYQVG  443 (708)
Q Consensus       373 ~~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rp-----s~~e~l~h~~f~~~  443 (708)
                      ...... .+..++..+                     ...+.+||.+||..||.+||     ++.|+++||||...
T Consensus       398 ~~~i~~-~~~~~p~~~---------------------s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~HpfF~~i  451 (576)
T 2acx_A          398 ERLVKE-VPEEYSERF---------------------SPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKL  451 (576)
T ss_dssp             HHHHHH-CCCCCCTTS---------------------CHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTSGGGTTC
T ss_pred             HHHhhc-ccccCCccC---------------------CHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhChhhccC
Confidence            111111 111111111                     25789999999999999999     78999999999754


No 115
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00  E-value=1.5e-42  Score=378.34  Aligned_cols=276  Identities=16%  Similarity=0.187  Sum_probs=211.0

Q ss_pred             CCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCC--CCCCChHHHHHHHHcCCCCCccEEEEEe
Q 005221          139 PMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKG--CNYGPPYEWQVYNTLGGSHGVPRVHFKG  216 (708)
Q Consensus       139 ~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~--~~~~~~~Ei~il~~L~h~~~v~~~~~~~  216 (708)
                      ++|.+.+.||+|+||.||+|++..          +++.||||++......  ....+.+|+.+++.|+|+|++..+..+.
T Consensus        42 ~~y~~~~~lG~G~~g~Vy~~~~~~----------~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~  111 (371)
T 4exu_A           42 KTYVSPTHVGSGAYGSVCSAIDKR----------SGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFT  111 (371)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETT----------TTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEEC
T ss_pred             ccEEEEeEEecCCCeEEEEEEECC----------CCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhhee
Confidence            589999999999999999999987          7899999999764322  1234678999999999999887777765


Q ss_pred             eeCC-----EEEEEEecCCCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcE
Q 005221          217 RQGD-----YYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKL  291 (708)
Q Consensus       217 ~~~~-----~~~lvme~~ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~v  291 (708)
                      ..+.     .+++|||+++++|.+++..   .+++..++.++.||+.||.|||++||+||||||+||||+.++     .+
T Consensus       112 ~~~~~~~~~~~~lv~e~~~~~l~~~~~~---~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~-----~~  183 (371)
T 4exu_A          112 PASSLRNFYDFYLVMPFMQTDLQKIMGM---EFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDC-----EL  183 (371)
T ss_dssp             SCSSSTTCCCCEEEEECCCEEHHHHTTS---CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTC-----CE
T ss_pred             ccCCcccceeEEEEEccccccHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHHCCCcCCCcCHHHeEECCCC-----CE
Confidence            4433     2499999999999888743   499999999999999999999999999999999999999877     59


Q ss_pred             EEeccCccccccCCCCCccccccCCCceeeccccccchhhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCchh
Q 005221          292 FLVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLG-RTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGF  370 (708)
Q Consensus       292 kL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~-~~~s~~~DIwSlGviL~eLltG~~Pf~~~~~~~~~~  370 (708)
                      ||+|||+++......           ...+||+.|+|||++.+ ..++.++|||||||+||+|++|++||.+.+..+...
T Consensus       184 kL~Dfg~a~~~~~~~-----------~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~  252 (371)
T 4exu_A          184 KILDFGLARHADAEM-----------TGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLT  252 (371)
T ss_dssp             EECSTTCC-------------------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH
T ss_pred             EEEecCcccccccCc-----------CCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHH
Confidence            999999998654432           23458999999999987 688999999999999999999999999876555555


Q ss_pred             hhhhhccCCCCCCccCCCChHHHHHHHHHHcCCCCCc----c-cHHHHHHHHHhhhCCCCCCCCcchHHHHhHHHHhc
Q 005221          371 LVCKKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEE----P-NYAKYISLFDGIVGPNPDIRPISTEGAQKLIYQVG  443 (708)
Q Consensus       371 ~i~~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~r----P-~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~~f~~~  443 (708)
                      .+......+..+.+..........++...........    + ....+.+||.+||..||++|||+.|+|+||||+..
T Consensus       253 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~  330 (371)
T 4exu_A          253 QILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPF  330 (371)
T ss_dssp             HHHHHHCCCCHHHHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTT
T ss_pred             HHHHHhCCCcHHHHHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcCcccccC
Confidence            5444333332222222222333333332221111110    0 12579999999999999999999999999999754


No 116
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00  E-value=5.5e-42  Score=357.88  Aligned_cols=263  Identities=16%  Similarity=0.192  Sum_probs=207.0

Q ss_pred             CCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCCC------CCCChHHHHHHHHcCCCCCccEE
Q 005221          139 PMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGC------NYGPPYEWQVYNTLGGSHGVPRV  212 (708)
Q Consensus       139 ~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~~------~~~~~~Ei~il~~L~h~~~v~~~  212 (708)
                      ++|++++.||+|+||.||+|++..          +++.||+|++.......      ...+.+|+.+++.|+|+|++..+
T Consensus         5 ~~y~~~~~lg~G~~g~V~~~~~~~----------~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~   74 (283)
T 3bhy_A            5 DHYEMGEELGSGQFAIVRKCRQKG----------TGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLH   74 (283)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETT----------TCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred             hhhhhHHhhcccCceEEEEEEEcC----------CCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehh
Confidence            369999999999999999999977          78999999988653221      22467899999999998866555


Q ss_pred             EEEeeeCCEEEEEEecC-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcE
Q 005221          213 HFKGRQGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKL  291 (708)
Q Consensus       213 ~~~~~~~~~~~lvme~~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~v  291 (708)
                      . +......+++|||++ +++|.+++.... .+++..++.++.||+.||.|||++||+||||||+|||++.++. ....+
T Consensus        75 ~-~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~-~~~~~  151 (283)
T 3bhy_A           75 D-IFENKTDVVLILELVSGGELFDFLAEKE-SLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNV-PNPRI  151 (283)
T ss_dssp             E-EEECSSEEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSS-SSCCE
T ss_pred             h-eecCCCeEEEEEeecCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChHHEEEecCCC-CCCce
Confidence            4 456778899999999 899999997654 6999999999999999999999999999999999999987662 23469


Q ss_pred             EEeccCccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCchhh
Q 005221          292 FLVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFL  371 (708)
Q Consensus       292 kL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLltG~~Pf~~~~~~~~~~~  371 (708)
                      ||+|||++.........         ....||+.|+|||++.+..++.++|||||||++|+|++|..||.+.........
T Consensus       152 kl~dfg~~~~~~~~~~~---------~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~  222 (283)
T 3bhy_A          152 KLIDFGIAHKIEAGNEF---------KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTN  222 (283)
T ss_dssp             EECCCTTCEECC-----------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHH
T ss_pred             EEEecccceeccCCCcc---------cccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHHHHHH
Confidence            99999999876543221         235599999999999999999999999999999999999999987554332222


Q ss_pred             hhhhccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhHHHHhccc
Q 005221          372 VCKKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKLIYQVGHK  445 (708)
Q Consensus       372 i~~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~~f~~~~~  445 (708)
                      +.......         +..+.           ..  ....+.+||.+||..||++||++.|+++||||+....
T Consensus       223 ~~~~~~~~---------~~~~~-----------~~--~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~~  274 (283)
T 3bhy_A          223 ISAVNYDF---------DEEYF-----------SN--TSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIRR  274 (283)
T ss_dssp             HHTTCCCC---------CHHHH-----------TT--CCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHHHH
T ss_pred             hHhcccCC---------cchhc-----------cc--CCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHHHH
Confidence            22211111         10000           00  1246899999999999999999999999999986543


No 117
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00  E-value=1e-42  Score=369.74  Aligned_cols=264  Identities=22%  Similarity=0.256  Sum_probs=202.1

Q ss_pred             CCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCCC---CCCChHHHHHHHHcCCCCCccEEEE
Q 005221          138 SPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGC---NYGPPYEWQVYNTLGGSHGVPRVHF  214 (708)
Q Consensus       138 ~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~~---~~~~~~Ei~il~~L~h~~~v~~~~~  214 (708)
                      .++|++++.||+|+||.||+|++..          +++.||||++.......   ...+.+|+.+++.|+|+|++..+..
T Consensus        11 ~~~y~~~~~lg~G~~g~V~~~~~~~----------~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~   80 (311)
T 3ork_A           11 SDRYELGEILGFGGMSEVHLARDLR----------DHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDT   80 (311)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETT----------TTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEE
T ss_pred             cCcEEEEEEEccCCCEEEEEEEECC----------CCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEe
Confidence            3579999999999999999999977          78999999997653221   1246789999999999998877766


Q ss_pred             EeeeC---CEEEEEEecC-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCc
Q 005221          215 KGRQG---DYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKK  290 (708)
Q Consensus       215 ~~~~~---~~~~lvme~~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~  290 (708)
                      +....   ..+||||||+ |++|.+++...+ .+++..++.++.||+.||.|||++||+||||||+|||++.++     .
T Consensus        81 ~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~-----~  154 (311)
T 3ork_A           81 GEAETPAGPLPYIVMEYVDGVTLRDIVHTEG-PMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATN-----A  154 (311)
T ss_dssp             EEEEETTEEEEEEEEECCCEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEETTS-----C
T ss_pred             eeccCCCCcccEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEcCCC-----C
Confidence            54332   3569999999 899999998765 699999999999999999999999999999999999998877     5


Q ss_pred             EEEeccCccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCchh
Q 005221          291 LFLVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGF  370 (708)
Q Consensus       291 vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLltG~~Pf~~~~~~~~~~  370 (708)
                      +||+|||+++.........     ......+||+.|+|||++.+..++.++|||||||+||+|++|+.||.+........
T Consensus       155 ~kl~Dfg~a~~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~  229 (311)
T 3ork_A          155 VKVMDFGIARAIADSGNSV-----TQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAY  229 (311)
T ss_dssp             EEECCCSCC-----------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH
T ss_pred             EEEeeccCccccccccccc-----ccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHH
Confidence            9999999998765432211     11234679999999999999999999999999999999999999998765433322


Q ss_pred             hhhhhccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhHHHHhcc
Q 005221          371 LVCKKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKLIYQVGH  444 (708)
Q Consensus       371 ~i~~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~~f~~~~  444 (708)
                      ........+ +......+                     ...+.+||.+||..||++||++.+++.|+|+....
T Consensus       230 ~~~~~~~~~-~~~~~~~~---------------------~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~  281 (311)
T 3ork_A          230 QHVREDPIP-PSARHEGL---------------------SADLDAVVLKALAKNPENRYQTAAEMRADLVRVHN  281 (311)
T ss_dssp             HHHHCCCCC-HHHHSTTC---------------------CHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHT
T ss_pred             HHhcCCCCC-cccccCCC---------------------CHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHHhc
Confidence            222221110 00000111                     14788999999999999999999999999987654


No 118
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00  E-value=7.9e-42  Score=359.60  Aligned_cols=272  Identities=19%  Similarity=0.219  Sum_probs=209.3

Q ss_pred             CCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCC--CCCCCChHHHHHHHHcCCCCCccEEEEEe
Q 005221          139 PMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSK--GCNYGPPYEWQVYNTLGGSHGVPRVHFKG  216 (708)
Q Consensus       139 ~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~--~~~~~~~~Ei~il~~L~h~~~v~~~~~~~  216 (708)
                      ++|++++.||+|+||.||+|++..          +++.||||++.....  .....+.+|+.++++++|+|++..+.. .
T Consensus         3 ~~y~~~~~lg~G~~g~V~~~~~~~----------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~-~   71 (299)
T 2r3i_A            3 ENFQKVEKIGEGTYGVVYKARNKL----------TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV-I   71 (299)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETT----------TCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEE-E
T ss_pred             chhhhhhhhccCCCeeEEEEEEcC----------CCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEE-E
Confidence            579999999999999999999977          789999999876532  223456789999999999886665554 5


Q ss_pred             eeCCEEEEEEecCCCCHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcEEEec
Q 005221          217 RQGDYYVMVMDMLGPSLWDVWNNNS-HTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVD  295 (708)
Q Consensus       217 ~~~~~~~lvme~~ggsL~~~l~~~~-~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~vkL~D  295 (708)
                      ..++.+++|||++.++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.++     .+||+|
T Consensus        72 ~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nili~~~~-----~~kl~d  146 (299)
T 2r3i_A           72 HTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEG-----AIKLAD  146 (299)
T ss_dssp             EETTEEEEEEECCSEEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTS-----CEEECS
T ss_pred             ecCCceEEEEEcccCCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHeEEcCCC-----CEEECc
Confidence            6778899999999999999997653 4699999999999999999999999999999999999998877     599999


Q ss_pred             cCccccccCCCCCccccccCCCceeeccccccchhhhcCCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhh
Q 005221          296 LGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRT-GSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCK  374 (708)
Q Consensus       296 FGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~-~s~~~DIwSlGviL~eLltG~~Pf~~~~~~~~~~~i~~  374 (708)
                      ||++.........        .....||+.|+|||++.+.. ++.++|||||||++|+|++|+.||.+....+....+.+
T Consensus       147 fg~~~~~~~~~~~--------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~  218 (299)
T 2r3i_A          147 FGLARAFGVPVRT--------YTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR  218 (299)
T ss_dssp             TTHHHHHCCCSBC--------TTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHH
T ss_pred             chhhhhccCCccc--------cCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHH
Confidence            9999876543211        12345899999999998865 79999999999999999999999998765544444443


Q ss_pred             hccCCCCCCccC-------------CCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhHHHH
Q 005221          375 KKMATSPDGLCC-------------FCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKLIYQ  441 (708)
Q Consensus       375 ~~~~~~p~~l~~-------------~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~~f~  441 (708)
                      ....+....+..             .....+..+.          .+-...+.+||.+||..||++|||+.|+++||||+
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~hp~~~  288 (299)
T 2r3i_A          219 TLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVV----------PPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ  288 (299)
T ss_dssp             HHCCCCTTTSTTGGGSTTCCTTSCCCCCCCHHHHS----------TTCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGT
T ss_pred             HhCCCchhhhhHhhcCcccchhhhcccchhhHhhC----------CCCCHHHHHHHHHhcCcCcccCCCHHHHhcChhhh
Confidence            322222111110             0001111000          00125789999999999999999999999999987


Q ss_pred             hcc
Q 005221          442 VGH  444 (708)
Q Consensus       442 ~~~  444 (708)
                      ...
T Consensus       289 ~~~  291 (299)
T 2r3i_A          289 DVT  291 (299)
T ss_dssp             TCC
T ss_pred             cCC
Confidence            543


No 119
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00  E-value=4.9e-42  Score=361.86  Aligned_cols=261  Identities=19%  Similarity=0.274  Sum_probs=201.4

Q ss_pred             CCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCCC---CCCChHHHHHHHHcCCCCCccEEEE
Q 005221          138 SPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGC---NYGPPYEWQVYNTLGGSHGVPRVHF  214 (708)
Q Consensus       138 ~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~~---~~~~~~Ei~il~~L~h~~~v~~~~~  214 (708)
                      .++|++++.||+|+||.||+|++..          ++..||+|++.......   ...+.+|+.++..|+|+|++..+. 
T Consensus        10 ~~~y~i~~~lg~G~~g~V~~~~~~~----------~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~-   78 (294)
T 4eqm_A           10 NERYKIVDKLGGGGMSTVYLAEDTI----------LNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMID-   78 (294)
T ss_dssp             ETTEEEEEEEEEETTEEEEEEEETT----------TCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEE-
T ss_pred             hccEEEEEEEccCCCEEEEEEEECC----------CCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEE-
Confidence            3589999999999999999999977          78999999986543321   234678999999999988665555 


Q ss_pred             EeeeCCEEEEEEecC-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcEEE
Q 005221          215 KGRQGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFL  293 (708)
Q Consensus       215 ~~~~~~~~~lvme~~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~vkL  293 (708)
                      ++..++.+++||||+ |++|.+++...+ .+++..++.++.||+.||.|||++||+||||||+|||++.++     .+||
T Consensus        79 ~~~~~~~~~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~-----~~kl  152 (294)
T 4eqm_A           79 VDEEDDCYYLVMEYIEGPTLSEYIESHG-PLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNK-----TLKI  152 (294)
T ss_dssp             EEECSSEEEEEEECCCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTS-----CEEE
T ss_pred             eeeeCCeEEEEEeCCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCC-----CEEE
Confidence            557788999999999 889999998765 699999999999999999999999999999999999998877     5999


Q ss_pred             eccCccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCchhhhh
Q 005221          294 VDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVC  373 (708)
Q Consensus       294 ~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLltG~~Pf~~~~~~~~~~~i~  373 (708)
                      +|||+++........       .....+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+...........
T Consensus       153 ~Dfg~~~~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~  225 (294)
T 4eqm_A          153 FDFGIAKALSETSLT-------QTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHI  225 (294)
T ss_dssp             CCCSSSTTC--------------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHHHHH
T ss_pred             EeCCCcccccccccc-------ccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHh
Confidence            999999876543211       1224669999999999999999999999999999999999999998755433222222


Q ss_pred             hhccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhHHHHhc
Q 005221          374 KKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKLIYQVG  443 (708)
Q Consensus       374 ~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~~f~~~  443 (708)
                      .......+..+...+|                     ..+.++|.+||..||++||+..+.+.+.+....
T Consensus       226 ~~~~~~~~~~~~~~~~---------------------~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~  274 (294)
T 4eqm_A          226 QDSVPNVTTDVRKDIP---------------------QSLSNVILRATEKDKANRYKTIQEMKDDLSSVL  274 (294)
T ss_dssp             SSCCCCHHHHSCTTSC---------------------HHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSS
T ss_pred             hccCCCcchhcccCCC---------------------HHHHHHHHHHhcCCHhHccccHHHHHHHHHHHH
Confidence            1111111011111122                     467889999999999999988888888775543


No 120
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00  E-value=3.3e-42  Score=367.44  Aligned_cols=259  Identities=19%  Similarity=0.255  Sum_probs=202.2

Q ss_pred             CCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCC--------CCCCCChHHHHHHHHcCCCCCcc
Q 005221          139 PMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSK--------GCNYGPPYEWQVYNTLGGSHGVP  210 (708)
Q Consensus       139 ~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~--------~~~~~~~~Ei~il~~L~h~~~v~  210 (708)
                      ++|++++.||+|+||.||+|++..          +++.||||++.....        .....+.+|+.+|+.|+|+|++.
T Consensus        10 ~~y~~~~~lg~G~~g~V~~~~~~~----------~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~   79 (322)
T 2ycf_A           10 DEYIMSKTLGSGACGEVKLAFERK----------TCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIK   79 (322)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETT----------TTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCC
T ss_pred             hceeEeeEEecCCCEEEEEEEEcC----------CCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCce
Confidence            369999999999999999999977          789999999875421        12345788999999999999777


Q ss_pred             EEEEEeeeCCEEEEEEecC-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCC
Q 005221          211 RVHFKGRQGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEK  289 (708)
Q Consensus       211 ~~~~~~~~~~~~~lvme~~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~  289 (708)
                      .+..+ ..++ +++||||+ +++|.+++.... .+++..++.++.||+.||.|||++||+||||||+|||++.++  ...
T Consensus        80 ~~~~~-~~~~-~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~--~~~  154 (322)
T 2ycf_A           80 IKNFF-DAED-YYIVLELMEGGELFDKVVGNK-RLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQE--EDC  154 (322)
T ss_dssp             EEEEE-ESSS-EEEEEECCTTEETHHHHSTTC-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSS--SSC
T ss_pred             EeeEE-cCCc-eEEEEecCCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEecCC--CCC
Confidence            66554 4444 89999999 789999887654 699999999999999999999999999999999999998765  233


Q ss_pred             cEEEeccCccccccCCCCCccccccCCCceeeccccccchhhhc---CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCC
Q 005221          290 KLFLVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHL---GRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGE  366 (708)
Q Consensus       290 ~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~---~~~~s~~~DIwSlGviL~eLltG~~Pf~~~~~~  366 (708)
                      .+||+|||+++.......         ....+||+.|+|||++.   +..++.++|||||||+||+|++|..||......
T Consensus       155 ~~kl~Dfg~~~~~~~~~~---------~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~  225 (322)
T 2ycf_A          155 LIKITDFGHSKILGETSL---------MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQ  225 (322)
T ss_dssp             CEEECCCTTCEECCCCHH---------HHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCS
T ss_pred             eEEEccCccceecccccc---------cccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchH
Confidence            699999999987644311         12356999999999974   567899999999999999999999999876544


Q ss_pred             Cchh-hhhhhccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhHHHHhc
Q 005221          367 NKGF-LVCKKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKLIYQVG  443 (708)
Q Consensus       367 ~~~~-~i~~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~~f~~~  443 (708)
                      .... .+........+. ....+                     ...+.+||.+||..||++||++.++|+||||...
T Consensus       226 ~~~~~~~~~~~~~~~~~-~~~~~---------------------~~~~~~li~~~l~~dP~~Rps~~~~l~h~~~~~~  281 (322)
T 2ycf_A          226 VSLKDQITSGKYNFIPE-VWAEV---------------------SEKALDLVKKLLVVDPKARFTTEEALRHPWLQDE  281 (322)
T ss_dssp             SCHHHHHHHTCCCCCHH-HHTTS---------------------CHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGCCH
T ss_pred             HHHHHHHHhCccccCch-hhhhc---------------------CHHHHHHHHHHcccCHhhCCCHHHHhhCcCcCCH
Confidence            3322 222222111110 00001                     2478999999999999999999999999998643


No 121
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00  E-value=5e-42  Score=377.39  Aligned_cols=267  Identities=21%  Similarity=0.278  Sum_probs=206.1

Q ss_pred             CCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCCCCCCChHHHHHHHHcCCCCCccEEEEEeee
Q 005221          139 PMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNTLGGSHGVPRVHFKGRQ  218 (708)
Q Consensus       139 ~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~~~~~~~~Ei~il~~L~h~~~v~~~~~~~~~  218 (708)
                      .+|++++.||+|+||.||+|++..          ++. ||+|.+....    ....+|+++|+.|+|+|++..+..+...
T Consensus        40 ~~Y~~~~~lG~G~~g~V~~a~~~~----------~~~-~aikk~~~~~----~~~~~E~~il~~l~h~niv~l~~~~~~~  104 (394)
T 4e7w_A           40 IAYTNCKVIGNGSFGVVFQAKLVE----------SDE-VAIKKVLQDK----RFKNRELQIMRIVKHPNVVDLKAFFYSN  104 (394)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEETT----------TEE-EEEEEEECCT----TSCCHHHHHHHTCCCTTBCCEEEEEEEE
T ss_pred             ceEEEeEEEeeCCCeEEEEEEECC----------CCe-EEEEEEecCc----chHHHHHHHHHhCCCCCcceEEEEEEec
Confidence            369999999999999999999866          444 8888876542    2345799999999999988887776543


Q ss_pred             C-----CEEEEEEecCCCCHHHHHhc---cCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeC-CCCCCCCC
Q 005221          219 G-----DYYVMVMDMLGPSLWDVWNN---NSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLG-PPGTPDEK  289 (708)
Q Consensus       219 ~-----~~~~lvme~~ggsL~~~l~~---~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~-~~g~~~~~  289 (708)
                      +     .++++||||+.++|.+.+..   ....+++..++.++.||+.||.|||++||+||||||+||||+ .++     
T Consensus       105 ~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~-----  179 (394)
T 4e7w_A          105 GDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSG-----  179 (394)
T ss_dssp             SSSSSCEEEEEEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTT-----
T ss_pred             CCCCCceEEEEEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEcCCCC-----
Confidence            3     35889999998888776542   345799999999999999999999999999999999999998 455     


Q ss_pred             cEEEeccCccccccCCCCCccccccCCCceeeccccccchhhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCc
Q 005221          290 KLFLVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGR-TGSRRDDLESLAYTLIFLLRGRLPWQGYQGENK  368 (708)
Q Consensus       290 ~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~-~~s~~~DIwSlGviL~eLltG~~Pf~~~~~~~~  368 (708)
                      .+||+|||+|+.+......         ...+||+.|+|||++.+. .++.++|||||||+||+|++|++||.+.+..+.
T Consensus       180 ~~kL~DFG~a~~~~~~~~~---------~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~  250 (394)
T 4e7w_A          180 VLKLIDFGSAKILIAGEPN---------VSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQ  250 (394)
T ss_dssp             EEEECCCTTCEECCTTCCC---------CSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH
T ss_pred             cEEEeeCCCcccccCCCCC---------cccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence            6999999999876544322         235689999999999875 589999999999999999999999998776655


Q ss_pred             hhhhhhhccCCCCCC------------ccCCCChHHHHHHHHHHcCCCCCcc-cHHHHHHHHHhhhCCCCCCCCcchHHH
Q 005221          369 GFLVCKKKMATSPDG------------LCCFCPAPFRQFVEYVVNLKFDEEP-NYAKYISLFDGIVGPNPDIRPISTEGA  435 (708)
Q Consensus       369 ~~~i~~~~~~~~p~~------------l~~~~p~~~~~l~~~~~~~~~~~rP-~~~~l~~LL~~mL~~dP~~Rps~~e~l  435 (708)
                      ...+.+....+..+.            ++...+..+...+          ++ ....+++||.+||..||.+|||+.|++
T Consensus       251 l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~li~~~L~~dP~~R~t~~e~l  320 (394)
T 4e7w_A          251 LVEIIKVLGTPSREQIKTMNPNYMEHKFPQIRPHPFSKVF----------RPRTPPDAIDLISRLLEYTPSARLTAIEAL  320 (394)
T ss_dssp             HHHHHHHHCCCCHHHHHHHCGGGSSSCCCCCCCCCHHHHS----------CTTCCHHHHHHHHHHCCSSGGGSCCHHHHH
T ss_pred             HHHHHHHhCCCCHHHHHhhChhhhhhccccccCCcHHHhc----------cccCCHHHHHHHHHHhCCChhhCCCHHHHh
Confidence            555554332221111            0000111111000          01 125799999999999999999999999


Q ss_pred             HhHHHHhcc
Q 005221          436 QKLIYQVGH  444 (708)
Q Consensus       436 ~h~~f~~~~  444 (708)
                      +||||+...
T Consensus       321 ~hp~f~~~~  329 (394)
T 4e7w_A          321 CHPFFDELR  329 (394)
T ss_dssp             TSGGGSTTT
T ss_pred             cChhhhhhc
Confidence            999997543


No 122
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00  E-value=2.5e-42  Score=368.07  Aligned_cols=262  Identities=21%  Similarity=0.211  Sum_probs=199.5

Q ss_pred             CCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCC-CCCCCChHHHHHHHHcCCCCCccEEEEEee
Q 005221          139 PMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSK-GCNYGPPYEWQVYNTLGGSHGVPRVHFKGR  217 (708)
Q Consensus       139 ~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~-~~~~~~~~Ei~il~~L~h~~~v~~~~~~~~  217 (708)
                      ++|++++.||+|+||.||+|++..          +++.||||++..... .....+.+|+.+|++|+|+|+|..+..+..
T Consensus         6 ~~y~~~~~lG~G~~g~V~~a~~~~----------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~   75 (332)
T 3qd2_B            6 TDFEPIQCMGRGGFGVVFEAKNKV----------DDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLE   75 (332)
T ss_dssp             HHEEEEEEEECC-CSEEEEEEETT----------TCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEE
T ss_pred             hcCceeeEecCCCCeEEEEEEEcC----------CCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEE
Confidence            369999999999999999999987          789999999975432 223457889999999999998888776643


Q ss_pred             eC--------------------------------------------------------CEEEEEEecC-CCCHHHHHhcc
Q 005221          218 QG--------------------------------------------------------DYYVMVMDML-GPSLWDVWNNN  240 (708)
Q Consensus       218 ~~--------------------------------------------------------~~~~lvme~~-ggsL~~~l~~~  240 (708)
                      ..                                                        .++++||||+ |++|.+++...
T Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~  155 (332)
T 3qd2_B           76 TPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRR  155 (332)
T ss_dssp             CCSCHHHHHHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTC
T ss_pred             eccchhhhhhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcc
Confidence            32                                                        2589999999 88999999875


Q ss_pred             CC--CCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcEEEeccCccccccCCCCCccc----ccc
Q 005221          241 SH--TMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHV----EYD  314 (708)
Q Consensus       241 ~~--~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~vkL~DFGla~~~~~~~~~~~~----~~~  314 (708)
                      ..  ..++..++.++.||+.||.|||++||+||||||+||||+.++     .+||+|||+++...........    ...
T Consensus       156 ~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~-----~~kL~DfG~a~~~~~~~~~~~~~~~~~~~  230 (332)
T 3qd2_B          156 CSLEDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDD-----VVKVGDFGLVTAMDQDEEEQTVLTPMPAY  230 (332)
T ss_dssp             CSGGGSCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTC-----CEEECCCTTCEECSCC-------------
T ss_pred             cCccchhhHHHHHHHHHHHHHHHHHHhCCeeecCCCcccEEEeCCC-----CEEEeecCcccccccchhhcccccccccc
Confidence            32  356677999999999999999999999999999999999777     5999999999987654321110    001


Q ss_pred             CCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhhccCCCCCCccCCCChHHHH
Q 005221          315 QRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCKKKMATSPDGLCCFCPAPFRQ  394 (708)
Q Consensus       315 ~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLltG~~Pf~~~~~~~~~~~i~~~~~~~~p~~l~~~~p~~~~~  394 (708)
                      ......+||+.|+|||++.+..++.++|||||||++|+|++|..|+...     ...+......        ..|..+..
T Consensus       231 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~-----~~~~~~~~~~--------~~~~~~~~  297 (332)
T 3qd2_B          231 ATHTGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMER-----VRIITDVRNL--------KFPLLFTQ  297 (332)
T ss_dssp             -CCCSCC-CGGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHH-----HHHHHHHHTT--------CCCHHHHH
T ss_pred             ccccccCCCcCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHH-----HHHHHHhhcc--------CCCccccc
Confidence            1223467999999999999999999999999999999999987765321     1111111100        01111110


Q ss_pred             HHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhHHHHh
Q 005221          395 FVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKLIYQV  442 (708)
Q Consensus       395 l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~~f~~  442 (708)
                                    ....+.+||.+||..||++|||+.|+++||||+.
T Consensus       298 --------------~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~f~~  331 (332)
T 3qd2_B          298 --------------KYPQEHMMVQDMLSPSPTERPEATDIIENAIFEN  331 (332)
T ss_dssp             --------------HCHHHHHHHHHHHCSSGGGSCCHHHHHHSTTCCC
T ss_pred             --------------CChhHHHHHHHHccCCCCcCCCHHHHhhchhhhc
Confidence                          1246789999999999999999999999999863


No 123
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00  E-value=4.2e-42  Score=368.25  Aligned_cols=279  Identities=17%  Similarity=0.179  Sum_probs=206.1

Q ss_pred             cccCCCCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCCC--CCCChHHHHHHHHcCCCCCcc
Q 005221          133 IAVGGSPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGC--NYGPPYEWQVYNTLGGSHGVP  210 (708)
Q Consensus       133 ~~~~~~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~~--~~~~~~Ei~il~~L~h~~~v~  210 (708)
                      +.....++|++++.||+|+||.||+|++..          +++.||||++.......  ...+.+|+.+++.|+|+|++.
T Consensus        19 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~----------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~   88 (331)
T 4aaa_A           19 LYFQSMEKYENLGLVGEGSYGMVMKCRNKD----------TGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVN   88 (331)
T ss_dssp             CCCBCGGGEEEEEEGGGGTTSSEEEEEETT----------TCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred             hhhhhhhhheeeeEEeecCCEEEEEEEECC----------CCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEee
Confidence            334455689999999999999999999977          78999999987653221  223568999999999988666


Q ss_pred             EEEEEeeeCCEEEEEEecCCCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCc
Q 005221          211 RVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKK  290 (708)
Q Consensus       211 ~~~~~~~~~~~~~lvme~~ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~  290 (708)
                      .+.. +...+.+++||||+.+.+.+.+......+++..+..++.||+.||.|||++||+||||||+|||++.++     .
T Consensus        89 ~~~~-~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nil~~~~~-----~  162 (331)
T 4aaa_A           89 LLEV-CKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVSQSG-----V  162 (331)
T ss_dssp             EEEE-EEETTEEEEEEECCSEEHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTS-----C
T ss_pred             EEEE-eecCCEEEEEEecCCcchHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCEEccCcChheEEEcCCC-----c
Confidence            5554 577889999999995555554444444799999999999999999999999999999999999998877     5


Q ss_pred             EEEeccCccccccCCCCCccccccCCCceeeccccccchhhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCch
Q 005221          291 LFLVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGR-TGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKG  369 (708)
Q Consensus       291 vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~-~~s~~~DIwSlGviL~eLltG~~Pf~~~~~~~~~  369 (708)
                      +||+|||+++........        ....+||+.|+|||++.+. .++.++|||||||++|+|++|++||.+....+..
T Consensus       163 ~kl~Dfg~~~~~~~~~~~--------~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~  234 (331)
T 4aaa_A          163 VKLCDFGFARTLAAPGEV--------YDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQL  234 (331)
T ss_dssp             EEECCCTTC--------------------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH
T ss_pred             EEEEeCCCceeecCCccc--------cCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHH
Confidence            999999999875543211        1235699999999999876 7899999999999999999999999987655444


Q ss_pred             hhhhhhccCCCCCCccCCCChHHHHHHHHHHcCCC------CC-------ccc-HHHHHHHHHhhhCCCCCCCCcchHHH
Q 005221          370 FLVCKKKMATSPDGLCCFCPAPFRQFVEYVVNLKF------DE-------EPN-YAKYISLFDGIVGPNPDIRPISTEGA  435 (708)
Q Consensus       370 ~~i~~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~------~~-------rP~-~~~l~~LL~~mL~~dP~~Rps~~e~l  435 (708)
                      ..+........         +.....+........      ..       .|. ...+.+||.+||..||++|||+.|+|
T Consensus       235 ~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell  305 (331)
T 4aaa_A          235 YHIMMCLGNLI---------PRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELL  305 (331)
T ss_dssp             HHHHHHHCSCC---------HHHHHHHHHCGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGG
T ss_pred             HHHHHHhCCCC---------hhhhhHhhhccccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHh
Confidence            43333222111         111111111000000      00       011 25789999999999999999999999


Q ss_pred             HhHHHHhcc
Q 005221          436 QKLIYQVGH  444 (708)
Q Consensus       436 ~h~~f~~~~  444 (708)
                      +||||+...
T Consensus       306 ~hp~f~~~~  314 (331)
T 4aaa_A          306 HHDFFQMDG  314 (331)
T ss_dssp             GSHHHHGGG
T ss_pred             cCchhccCC
Confidence            999998654


No 124
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00  E-value=1.9e-42  Score=360.66  Aligned_cols=255  Identities=20%  Similarity=0.229  Sum_probs=185.2

Q ss_pred             CCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCC---CCCCCCChHHHHHHHHcCCCCCccEEEEE
Q 005221          139 PMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSS---KGCNYGPPYEWQVYNTLGGSHGVPRVHFK  215 (708)
Q Consensus       139 ~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~---~~~~~~~~~Ei~il~~L~h~~~v~~~~~~  215 (708)
                      ++|++.+.||+|+||.||+|++..          +++.||||++....   ......+.+|+.+++.++|+|++..+.. 
T Consensus        11 ~~y~~~~~lg~G~~g~Vy~~~~~~----------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~-   79 (278)
T 3cok_A           11 EDFKVGNLLGKGSFAGVYRAESIH----------TGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNY-   79 (278)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETT----------TCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEE-
T ss_pred             ccceeeeeecCCCceEEEEEEEcc----------CCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEE-
Confidence            479999999999999999999977          78999999987542   1222457789999999999886665554 


Q ss_pred             eeeCCEEEEEEecC-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcEEEe
Q 005221          216 GRQGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLV  294 (708)
Q Consensus       216 ~~~~~~~~lvme~~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~vkL~  294 (708)
                      ....+.+++|||++ +++|.+++......+++..++.++.||+.||.|||++||+||||||+|||++.++     .+||+
T Consensus        80 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nili~~~~-----~~kl~  154 (278)
T 3cok_A           80 FEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNM-----NIKIA  154 (278)
T ss_dssp             EECSSEEEEEEECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHHTTEECSSCCGGGEEECTTC-----CEEEC
T ss_pred             EccCCeEEEEEecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCC-----CEEEE
Confidence            56788999999999 8899999988766899999999999999999999999999999999999998877     59999


Q ss_pred             ccCccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhh
Q 005221          295 DLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCK  374 (708)
Q Consensus       295 DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLltG~~Pf~~~~~~~~~~~i~~  374 (708)
                      |||++.........        ....+||+.|+|||++.+..++.++|||||||++|+|++|+.||...........+..
T Consensus       155 dfg~~~~~~~~~~~--------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~  226 (278)
T 3cok_A          155 DFGLATQLKMPHEK--------HYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVL  226 (278)
T ss_dssp             CCTTCEECC------------------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-----CCS
T ss_pred             eecceeeccCCCCc--------ceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHHHHHhh
Confidence            99999876533211        1235699999999999999999999999999999999999999987554332211111


Q ss_pred             hccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhHHHHhc
Q 005221          375 KKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKLIYQVG  443 (708)
Q Consensus       375 ~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~~f~~~  443 (708)
                      ..     ..++..+                     ...+.+||.+||..||++||++.++++||||...
T Consensus       227 ~~-----~~~~~~~---------------------~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~  269 (278)
T 3cok_A          227 AD-----YEMPSFL---------------------SIEAKDLIHQLLRRNPADRLSLSSVLDHPFMSRN  269 (278)
T ss_dssp             SC-----CCCCTTS---------------------CHHHHHHHHHHSCSSGGGSCCHHHHTTSTTTC--
T ss_pred             cc-----cCCcccc---------------------CHHHHHHHHHHcccCHhhCCCHHHHhcCccccCC
Confidence            10     0011111                     1478899999999999999999999999998653


No 125
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00  E-value=4.9e-42  Score=390.96  Aligned_cols=260  Identities=18%  Similarity=0.203  Sum_probs=207.5

Q ss_pred             CCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCC---CCCCCCChHHHHHHHHcCCCCCccEEEE
Q 005221          138 SPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSS---KGCNYGPPYEWQVYNTLGGSHGVPRVHF  214 (708)
Q Consensus       138 ~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~---~~~~~~~~~Ei~il~~L~h~~~v~~~~~  214 (708)
                      .++|++++.||+|+||.||+|++..          +++.||||++.+..   ......+.+|+.+|+.++|++++..+ .
T Consensus       184 ~~~f~~~~~LG~G~fG~Vy~a~~~~----------tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~-~  252 (543)
T 3c4z_A          184 EDWFLDFRVLGRGGFGEVFACQMKA----------TGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLA-Y  252 (543)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETT----------TCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEE-E
T ss_pred             hhheEEEEEEeeCCCeEEEEEEECC----------CCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEE-E
Confidence            3579999999999999999999977          78999999997642   12223467899999999988866554 4


Q ss_pred             EeeeCCEEEEEEecC-CCCHHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCc
Q 005221          215 KGRQGDYYVMVMDML-GPSLWDVWNNN---SHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKK  290 (708)
Q Consensus       215 ~~~~~~~~~lvme~~-ggsL~~~l~~~---~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~  290 (708)
                      ++...+.+||||||+ ||+|.+++...   ...+++..++.++.||+.||.|||++|||||||||+||||+.++     .
T Consensus       253 ~~~~~~~l~lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~gIvHrDLKP~NILl~~~g-----~  327 (543)
T 3c4z_A          253 AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDG-----N  327 (543)
T ss_dssp             EEECSSEEEEEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTS-----C
T ss_pred             EEeeCCEEEEEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcCCcccCCChHHEEEeCCC-----C
Confidence            557778899999999 89999998764   23699999999999999999999999999999999999999887     5


Q ss_pred             EEEeccCccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCchh
Q 005221          291 LFLVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGF  370 (708)
Q Consensus       291 vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLltG~~Pf~~~~~~~~~~  370 (708)
                      +||+|||+++.+......        ....+||+.|+|||++.+..++.++|||||||+||||++|++||.+........
T Consensus       328 vkL~DFGla~~~~~~~~~--------~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~  399 (543)
T 3c4z_A          328 VRISDLGLAVELKAGQTK--------TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENK  399 (543)
T ss_dssp             EEECCCTTCEECCTTCCC--------BCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHH
T ss_pred             EEEeecceeeeccCCCcc--------cccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHH
Confidence            999999999876544321        124679999999999999999999999999999999999999998754332212


Q ss_pred             hhhhhccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCc-----chHHHHhHHHHhc
Q 005221          371 LVCKKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPI-----STEGAQKLIYQVG  443 (708)
Q Consensus       371 ~i~~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps-----~~e~l~h~~f~~~  443 (708)
                      .+........ ..++..+                     ...+.+||.+||..||++||+     +.+++.||||...
T Consensus       400 ~~~~~i~~~~-~~~p~~~---------------------s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~Hpff~~i  455 (543)
T 3c4z_A          400 ELKQRVLEQA-VTYPDKF---------------------SPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDI  455 (543)
T ss_dssp             HHHHHHHHCC-CCCCTTS---------------------CHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHTSGGGTTC
T ss_pred             HHHHHHhhcc-cCCCccc---------------------CHHHHHHHHHhccCCHhHCCCCcccCHHHHHcCccccCC
Confidence            1111111000 0011111                     247899999999999999996     5899999999754


No 126
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00  E-value=9.1e-43  Score=379.68  Aligned_cols=258  Identities=17%  Similarity=0.108  Sum_probs=188.9

Q ss_pred             CeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCC---CCCCChHHHHHHHHc--CCCCCccEEE-
Q 005221          140 MYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKG---CNYGPPYEWQVYNTL--GGSHGVPRVH-  213 (708)
Q Consensus       140 ~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~---~~~~~~~Ei~il~~L--~h~~~v~~~~-  213 (708)
                      .|++++.||+|+||.||+|++..          +++.||||++......   ....+.+|+.+++.|  +|+|+|..+. 
T Consensus        63 ~y~~~~~lG~G~~g~V~~~~~~~----------~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~  132 (371)
T 3q60_A           63 KLKLVEPLRVGDRSVVFLVRDVE----------RLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRR  132 (371)
T ss_dssp             EEEEEEEEEECSSEEEEEEEETT----------TTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------C
T ss_pred             eeeeeeeccCCCCEEEEEEEECC----------CCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhcee
Confidence            49999999999999999999987          7899999999875321   122456786666666  4888665442 


Q ss_pred             ------EEeeeC----------------CEEEEEEecCCCCHHHHHhccCCCCCHHHH------HHHHHHHHHHHHHHHh
Q 005221          214 ------FKGRQG----------------DYYVMVMDMLGPSLWDVWNNNSHTMSIEMV------ACIAIEAISILEKMHS  265 (708)
Q Consensus       214 ------~~~~~~----------------~~~~lvme~~ggsL~~~l~~~~~~l~~~~~------~~i~~qil~aL~yLH~  265 (708)
                            .+...+                ..+||||||++++|.+++...+..+++..+      ..++.||+.||+|||+
T Consensus       133 ~~~p~d~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~  212 (371)
T 3q60_A          133 LLLPSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAASVDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQS  212 (371)
T ss_dssp             BCCCCEEEEETTSCSSSBCSCC---CCEEEEEEEECCCSEEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEeeehheecCCCCCeeeccCCcccceeeeEEEEecCCCCCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHHH
Confidence                  221111                458999999999999999876445655555      6778999999999999


Q ss_pred             CCceecCCCCCcEEeCCCCCCCCCcEEEeccCccccccCCCCCccccccCCCceeeccccccchhhhcC--CCCCchhhH
Q 005221          266 KGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLG--RTGSRRDDL  343 (708)
Q Consensus       266 ~gIvHrDIKP~NILl~~~g~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~--~~~s~~~DI  343 (708)
                      +|||||||||+||||+.++     .+||+|||+|+.......           ...+|+.|+|||++.+  ..++.++||
T Consensus       213 ~~ivHrDikp~NIll~~~~-----~~kL~DFG~a~~~~~~~~-----------~~~~t~~y~aPE~~~~~~~~~~~~~Di  276 (371)
T 3q60_A          213 KGLVHGHFTPDNLFIMPDG-----RLMLGDVSALWKVGTRGP-----------ASSVPVTYAPREFLNASTATFTHALNA  276 (371)
T ss_dssp             TTEEETTCSGGGEEECTTS-----CEEECCGGGEEETTCEEE-----------GGGSCGGGCCHHHHTCSEEECCHHHHH
T ss_pred             CCCccCcCCHHHEEECCCC-----CEEEEecceeeecCCCcc-----------CccCCcCCcChhhccCCCCCcCccccH
Confidence            9999999999999999877     599999999986543211           2347799999999988  789999999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCCCCchhhhh--hhccCCCCCCc--cCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHh
Q 005221          344 ESLAYTLIFLLRGRLPWQGYQGENKGFLVC--KKKMATSPDGL--CCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDG  419 (708)
Q Consensus       344 wSlGviL~eLltG~~Pf~~~~~~~~~~~i~--~~~~~~~p~~l--~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~  419 (708)
                      |||||+||+|++|++||.+...........  ..........+  +..+                     ...+.+||.+
T Consensus       277 wSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~li~~  335 (371)
T 3q60_A          277 WQLGLSIYRVWCLFLPFGLVTPGIKGSWKRPSLRVPGTDSLAFGSCTPL---------------------PDFVKTLIGR  335 (371)
T ss_dssp             HHHHHHHHHHHHSSCSTTBCCTTCTTCCCBCCTTSCCCCSCCCTTSSCC---------------------CHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCCCCCcCcccccchhhhhhhhccccccchhhccCC---------------------CHHHHHHHHH
Confidence            999999999999999998764332110000  00000000000  0011                     2578999999


Q ss_pred             hhCCCCCCCCcchHHHHhHHHHhcc
Q 005221          420 IVGPNPDIRPISTEGAQKLIYQVGH  444 (708)
Q Consensus       420 mL~~dP~~Rps~~e~l~h~~f~~~~  444 (708)
                      ||..||++|||+.|+|+||||....
T Consensus       336 ~L~~dP~~Rpt~~e~l~hp~f~~~~  360 (371)
T 3q60_A          336 FLNFDRRRRLLPLEAMETPEFLQLQ  360 (371)
T ss_dssp             HTCSSTTTCCCHHHHTTSHHHHHHH
T ss_pred             HcCCChhhCCCHHHHhcCHHHHHHH
Confidence            9999999999999999999997653


No 127
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00  E-value=9.1e-42  Score=367.06  Aligned_cols=248  Identities=18%  Similarity=0.251  Sum_probs=204.3

Q ss_pred             CCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCC--------CCCCChHHHHHHHHcCCCCCcc
Q 005221          139 PMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKG--------CNYGPPYEWQVYNTLGGSHGVP  210 (708)
Q Consensus       139 ~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~--------~~~~~~~Ei~il~~L~h~~~v~  210 (708)
                      ++|++++.||+|+||.||+|++..          +++.||||++......        ....+.+|+.+|+.|+|+|++.
T Consensus        24 ~~y~~~~~lG~G~~g~Vy~a~~~~----------~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~   93 (335)
T 3dls_A           24 QKYSTMSPLGSGAFGFVWTAVDKE----------KNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIK   93 (335)
T ss_dssp             HHEEEEEECSSSSSCSEEEEEETT----------TTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCC
T ss_pred             cceEEEeEEEecCCEEEEEEEECC----------CCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEee
Confidence            479999999999999999999987          7899999999875321        2335778999999999988666


Q ss_pred             EEEEEeeeCCEEEEEEecC-CC-CHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCC
Q 005221          211 RVHFKGRQGDYYVMVMDML-GP-SLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDE  288 (708)
Q Consensus       211 ~~~~~~~~~~~~~lvme~~-gg-sL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~  288 (708)
                      .+.. +...+.+++|||++ +| +|.+++.... .+++..++.|+.||+.||.|||++||+||||||+|||++.++    
T Consensus        94 ~~~~-~~~~~~~~lv~e~~~~g~~l~~~~~~~~-~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~----  167 (335)
T 3dls_A           94 VLDI-FENQGFFQLVMEKHGSGLDLFAFIDRHP-RLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDF----  167 (335)
T ss_dssp             EEEE-EECSSEEEEEEECCTTSCBHHHHHHTCC-CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTS----
T ss_pred             EEEE-EeeCCEEEEEEEeCCCCccHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCeEEeccCHHHEEEcCCC----
Confidence            5554 57788899999988 44 9999988765 699999999999999999999999999999999999998877    


Q ss_pred             CcEEEeccCccccccCCCCCccccccCCCceeeccccccchhhhcCCCC-CchhhHHHHHHHHHHHHhCCCCCCCCCCCC
Q 005221          289 KKLFLVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTG-SRRDDLESLAYTLIFLLRGRLPWQGYQGEN  367 (708)
Q Consensus       289 ~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~-s~~~DIwSlGviL~eLltG~~Pf~~~~~~~  367 (708)
                       .+||+|||+++.......         ....+||+.|+|||++.+..+ +.++|||||||++|+|++|+.||...... 
T Consensus       168 -~~kL~Dfg~a~~~~~~~~---------~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-  236 (335)
T 3dls_A          168 -TIKLIDFGSAAYLERGKL---------FYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET-  236 (335)
T ss_dssp             -CEEECCCTTCEECCTTCC---------BCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG-
T ss_pred             -cEEEeecccceECCCCCc---------eeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHH-
Confidence             599999999987655422         124679999999999998887 88999999999999999999999763211 


Q ss_pred             chhhhhhhccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhHHHHhcc
Q 005221          368 KGFLVCKKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKLIYQVGH  444 (708)
Q Consensus       368 ~~~~i~~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~~f~~~~  444 (708)
                           ..... ..+    ..+                     ...+.+||.+||..||++|||+.++++||||....
T Consensus       237 -----~~~~~-~~~----~~~---------------------~~~l~~li~~~L~~dP~~Rps~~ell~hp~~~~~~  282 (335)
T 3dls_A          237 -----VEAAI-HPP----YLV---------------------SKELMSLVSGLLQPVPERRTTLEKLVTDPWVTQPV  282 (335)
T ss_dssp             -----TTTCC-CCS----SCC---------------------CHHHHHHHHHHTCSSGGGSCCHHHHHHCTTTTCCC
T ss_pred             -----Hhhcc-CCC----ccc---------------------CHHHHHHHHHHccCChhhCcCHHHHhcCccccCCc
Confidence                 00000 001    111                     14788999999999999999999999999987543


No 128
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00  E-value=1.1e-41  Score=359.61  Aligned_cols=259  Identities=22%  Similarity=0.245  Sum_probs=210.1

Q ss_pred             CCCCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCC-CCCCCChHHHHHHHHcCCCCCccEEEE
Q 005221          136 GGSPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSK-GCNYGPPYEWQVYNTLGGSHGVPRVHF  214 (708)
Q Consensus       136 ~~~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~-~~~~~~~~Ei~il~~L~h~~~v~~~~~  214 (708)
                      ...++|++++.||+|+||.||+|++..          +++.||||++..... .....+.+|+.+++.++|+|++..+..
T Consensus        19 ~~~~~y~~~~~lg~G~~g~V~~~~~~~----------~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~   88 (303)
T 3a7i_A           19 DPEELFTKLEKIGKGSFGEVFKGIDNR----------TQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGS   88 (303)
T ss_dssp             CGGGTEEEEEEEEECSSSEEEEEEETT----------TCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred             ChHHHHHHhhhhcccCCeEEEEEEECC----------CCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEE
Confidence            344579999999999999999999877          789999999976532 223457889999999999886665554


Q ss_pred             EeeeCCEEEEEEecC-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcEEE
Q 005221          215 KGRQGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFL  293 (708)
Q Consensus       215 ~~~~~~~~~lvme~~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~vkL  293 (708)
                       +.....+++||||+ +++|.+++..  ..+++..++.++.||+.||.|||++||+||||||+|||++.++     .+||
T Consensus        89 -~~~~~~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~-----~~kl  160 (303)
T 3a7i_A           89 -YLKDTKLWIIMEYLGGGSALDLLEP--GPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHG-----EVKL  160 (303)
T ss_dssp             -EEETTEEEEEEECCTTEEHHHHHTT--SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTS-----CEEE
T ss_pred             -EecCCeEEEEEEeCCCCcHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChheEEECCCC-----CEEE
Confidence             46678899999999 7899999875  3699999999999999999999999999999999999998877     5999


Q ss_pred             eccCccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCchhhhh
Q 005221          294 VDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVC  373 (708)
Q Consensus       294 ~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLltG~~Pf~~~~~~~~~~~i~  373 (708)
                      +|||++.........        .....||+.|+|||++.+..++.++|||||||+||+|++|+.||...........+.
T Consensus       161 ~Dfg~~~~~~~~~~~--------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~  232 (303)
T 3a7i_A          161 ADFGVAGQLTDTQIK--------RNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIP  232 (303)
T ss_dssp             CCCTTCEECBTTBCC--------BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHH
T ss_pred             eecccceecCccccc--------cCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHHHHHhh
Confidence            999999876543211        123569999999999999999999999999999999999999998754433322222


Q ss_pred             hhccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhHHHHhccc
Q 005221          374 KKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKLIYQVGHK  445 (708)
Q Consensus       374 ~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~~f~~~~~  445 (708)
                      ....    ..+...++                     ..+.+||.+||..||++|||+.++++|+||.....
T Consensus       233 ~~~~----~~~~~~~~---------------------~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~~~~~  279 (303)
T 3a7i_A          233 KNNP----PTLEGNYS---------------------KPLKEFVEACLNKEPSFRPTAKELLKHKFILRNAK  279 (303)
T ss_dssp             HSCC----CCCCSSCC---------------------HHHHHHHHHHCCSSGGGSCCHHHHTTCHHHHHHCC
T ss_pred             cCCC----CCCccccC---------------------HHHHHHHHHHcCCChhhCcCHHHHhhChhhhcCCC
Confidence            2111    11111222                     46889999999999999999999999999976543


No 129
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00  E-value=2.1e-41  Score=360.87  Aligned_cols=278  Identities=18%  Similarity=0.157  Sum_probs=210.9

Q ss_pred             CCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCC--CCCCCCChHHHHHHHHc---CCCCCccEEE
Q 005221          139 PMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSS--KGCNYGPPYEWQVYNTL---GGSHGVPRVH  213 (708)
Q Consensus       139 ~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~--~~~~~~~~~Ei~il~~L---~h~~~v~~~~  213 (708)
                      ++|++++.||+|+||.||+|++...         +++.||||++....  ......+.+|+.+++.|   .|+|++..+.
T Consensus        11 ~~y~~~~~lg~G~~g~V~~~~~~~~---------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~   81 (326)
T 1blx_A           11 QQYECVAEIGEGAYGKVFKARDLKN---------GGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFD   81 (326)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTT---------TTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEE
T ss_pred             hceeeeeeecccccEEEEEEEecCC---------CCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeee
Confidence            5799999999999999999998531         67899999987643  22344677899998888   7888777766


Q ss_pred             EEee----eCCEEEEEEecCCCCHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCC
Q 005221          214 FKGR----QGDYYVMVMDMLGPSLWDVWNNNS-HTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDE  288 (708)
Q Consensus       214 ~~~~----~~~~~~lvme~~ggsL~~~l~~~~-~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~  288 (708)
                      .+..    ....+++|||+++++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.++    
T Consensus        82 ~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~gi~H~dlkp~Nili~~~~----  157 (326)
T 1blx_A           82 VCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSG----  157 (326)
T ss_dssp             EEEEEECSSEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTC----
T ss_pred             eeeecccCCCceEEEEEecCCCCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHHHeEEcCCC----
Confidence            6541    457899999999999999998753 3599999999999999999999999999999999999998877    


Q ss_pred             CcEEEeccCccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCc
Q 005221          289 KKLFLVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENK  368 (708)
Q Consensus       289 ~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLltG~~Pf~~~~~~~~  368 (708)
                       .+||+|||+++.......         ....+||+.|+|||++.+..++.++|||||||++|+|++|++||.+......
T Consensus       158 -~~kl~Dfg~~~~~~~~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~  227 (326)
T 1blx_A          158 -QIKLADFGLARIYSFQMA---------LTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQ  227 (326)
T ss_dssp             -CEEECSCCSCCCCCGGGG---------GCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH
T ss_pred             -CEEEecCcccccccCCCC---------ccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHH
Confidence             599999999986543211         1235699999999999999999999999999999999999999998665444


Q ss_pred             hhhhhhhccCCCCCCccCCCChHHHHHHHHHHcC-CCC----Ccc-cHHHHHHHHHhhhCCCCCCCCcchHHHHhHHHHh
Q 005221          369 GFLVCKKKMATSPDGLCCFCPAPFRQFVEYVVNL-KFD----EEP-NYAKYISLFDGIVGPNPDIRPISTEGAQKLIYQV  442 (708)
Q Consensus       369 ~~~i~~~~~~~~p~~l~~~~p~~~~~l~~~~~~~-~~~----~rP-~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~~f~~  442 (708)
                      ...+......+....+.......-     ..... ...    ..+ -...+.+||.+||..||++|||+.|+++||||..
T Consensus       228 ~~~i~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~  302 (326)
T 1blx_A          228 LGKILDVIGLPGEEDWPRDVALPR-----QAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQD  302 (326)
T ss_dssp             HHHHHHHHCCCCGGGSCTTCSSCG-----GGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTT
T ss_pred             HHHHHHHcCCCCcccCccccccch-----hhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcCccccc
Confidence            444433322222221111100000     00000 000    001 1257899999999999999999999999999875


Q ss_pred             cc
Q 005221          443 GH  444 (708)
Q Consensus       443 ~~  444 (708)
                      ..
T Consensus       303 ~~  304 (326)
T 1blx_A          303 LE  304 (326)
T ss_dssp             CC
T ss_pred             cc
Confidence            43


No 130
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00  E-value=5.2e-42  Score=372.72  Aligned_cols=271  Identities=23%  Similarity=0.356  Sum_probs=197.2

Q ss_pred             CCCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCCCCCCChHHHHH---------------HH
Q 005221          137 GSPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQV---------------YN  201 (708)
Q Consensus       137 ~~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~~~~~~~~Ei~i---------------l~  201 (708)
                      ..++|+++++||+|+||.||+|++...     .....++.||||++.....    .+.+|+.+               +.
T Consensus        33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~-----~~~~~~~~vavK~~~~~~~----~~~~e~~~~~~~~~~~~~~e~~~~~  103 (364)
T 3op5_A           33 AAAAWKVGLPIGQGGFGCIYLADMNSS-----ESVGSDAPCVVKVEPSDNG----PLFTELKFYQRAAKPEQIQKWIRTR  103 (364)
T ss_dssp             TCCEEEEEEECCCC-CCEEEEEEECCS-----SCCCTTCSEEEEEEETTCH----HHHHHHHHHHHHCCHHHHHHHHHHT
T ss_pred             CCCeEEEEEEEecCCCeEEEEeeecCc-----cccccccceEEEEeeccch----hHHHHHHHHHhhhhhHHHHHHHHHh
Confidence            456899999999999999999998651     1111368899999876532    23344444               44


Q ss_pred             HcCCCCCccEEEEEeee---CCEEEEEEecCCCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcE
Q 005221          202 TLGGSHGVPRVHFKGRQ---GDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENF  278 (708)
Q Consensus       202 ~L~h~~~v~~~~~~~~~---~~~~~lvme~~ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NI  278 (708)
                      .++|+|++..+..+...   ..+++|||||+|++|.+++......+++..++.|+.||+.||.|||++|||||||||+||
T Consensus       104 ~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~Ni  183 (364)
T 3op5_A          104 KLKYLGVPKYWGSGLHDKNGKSYRFMIMDRFGSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNL  183 (364)
T ss_dssp             TCSCCCSCCEEEEEEEEETTEEEEEEEEECEEEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGE
T ss_pred             hccCCCCCeEEeeeeeccCCcceEEEEEeCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeEEecCCHHHE
Confidence            55677777666655433   267899999999999999988767899999999999999999999999999999999999


Q ss_pred             EeC--CCCCCCCCcEEEeccCccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHhC
Q 005221          279 LLG--PPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRG  356 (708)
Q Consensus       279 Ll~--~~g~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLltG  356 (708)
                      ||+  .++     .+||+|||+++.+......... ........+||+.|+|||++.+..++.++|||||||+||+|++|
T Consensus       184 ll~~~~~~-----~~kl~DFG~a~~~~~~~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g  257 (364)
T 3op5_A          184 LLNYKNPD-----QVYLVDYGLAYRYCPEGVHKAY-AADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTG  257 (364)
T ss_dssp             EEESSCTT-----CEEECCCTTCEESSGGGCCCCS-SCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHS
T ss_pred             EEecCCCC-----eEEEEECCcceecccCCccccc-ccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhC
Confidence            998  444     6999999999876554322111 11122456799999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCchhhhhhhccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHH
Q 005221          357 RLPWQGYQGENKGFLVCKKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQ  436 (708)
Q Consensus       357 ~~Pf~~~~~~~~~~~i~~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~  436 (708)
                      +.||.+...............           ...+..++..|+...  .-  ...+.+|+..|+..||.+||++.++++
T Consensus       258 ~~Pf~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~--~~--~~~~~~li~~cl~~~p~~RP~~~~l~~  322 (364)
T 3op5_A          258 HLPWEDNLKDPKYVRDSKIRY-----------RENIASLMDKCFPAA--NA--PGEIAKYMETVKLLDYTEKPLYENLRD  322 (364)
T ss_dssp             CCTTGGGTTCHHHHHHHHHHH-----------HHCHHHHHHHHSCTT--CC--CHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred             CCCccccccCHHHHHHHHHHh-----------hhhHHHHHHHhcccc--cC--HHHHHHHHHHHhcCCCCCCCCHHHHHH
Confidence            999997544332222222111           122334444444211  11  146777777777777777777777665


Q ss_pred             h
Q 005221          437 K  437 (708)
Q Consensus       437 h  437 (708)
                      .
T Consensus       323 ~  323 (364)
T 3op5_A          323 I  323 (364)
T ss_dssp             H
T ss_pred             H
Confidence            4


No 131
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00  E-value=6.1e-42  Score=358.28  Aligned_cols=254  Identities=19%  Similarity=0.250  Sum_probs=207.6

Q ss_pred             CCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCC---CCCCCCChHHHHHHHHcCCCCCccEEEEE
Q 005221          139 PMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSS---KGCNYGPPYEWQVYNTLGGSHGVPRVHFK  215 (708)
Q Consensus       139 ~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~---~~~~~~~~~Ei~il~~L~h~~~v~~~~~~  215 (708)
                      ++|++.+.||+|+||.||+|++..          ++..||||++....   ......+.+|+.+++.++|+|++..+.. 
T Consensus        14 ~~y~~~~~lg~G~~g~Vy~~~~~~----------~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~-   82 (284)
T 2vgo_A           14 DDFDIGRPLGKGKFGNVYLAREKQ----------NKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNY-   82 (284)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETT----------TTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEE-
T ss_pred             hhceeeheecCCCCeEEEEEEEcC----------CCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEE-
Confidence            479999999999999999999977          78899999987542   2223357789999999999886665554 


Q ss_pred             eeeCCEEEEEEecC-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcEEEe
Q 005221          216 GRQGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLV  294 (708)
Q Consensus       216 ~~~~~~~~lvme~~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~vkL~  294 (708)
                      +...+.+++|||++ +++|.+++...+ .+++..++.++.||+.||.|||++||+||||||+|||++.++     .+||+
T Consensus        83 ~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~-----~~kl~  156 (284)
T 2vgo_A           83 FHDRKRIYLMLEFAPRGELYKELQKHG-RFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKG-----ELKIA  156 (284)
T ss_dssp             EECSSEEEEEECCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTC-----CEEEC
T ss_pred             EEcCCEEEEEEEeCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEEcCCC-----CEEEe
Confidence            56778999999999 789999998765 699999999999999999999999999999999999998877     59999


Q ss_pred             ccCccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhh
Q 005221          295 DLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCK  374 (708)
Q Consensus       295 DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLltG~~Pf~~~~~~~~~~~i~~  374 (708)
                      |||++........          ...+||+.|+|||++.+..++.++|||||||++|+|++|..||...........+..
T Consensus       157 Dfg~~~~~~~~~~----------~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~  226 (284)
T 2vgo_A          157 DFGWSVHAPSLRR----------RTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVN  226 (284)
T ss_dssp             CCTTCEECSSSCB----------CCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHT
T ss_pred             cccccccCccccc----------ccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHHHHHHhc
Confidence            9999976543221          235699999999999999999999999999999999999999987543332222222


Q ss_pred             hccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhHHHHhccc
Q 005221          375 KKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKLIYQVGHK  445 (708)
Q Consensus       375 ~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~~f~~~~~  445 (708)
                      ....     ++..+                     ...+.+||.+||..||.+||++.++++||||....+
T Consensus       227 ~~~~-----~~~~~---------------------~~~~~~li~~~l~~~p~~Rps~~~ll~h~~~~~~~~  271 (284)
T 2vgo_A          227 VDLK-----FPPFL---------------------SDGSKDLISKLLRYHPPQRLPLKGVMEHPWVKANSR  271 (284)
T ss_dssp             TCCC-----CCTTS---------------------CHHHHHHHHHHSCSSGGGSCCHHHHHTCHHHHHHCC
T ss_pred             cccC-----CCCcC---------------------CHHHHHHHHHHhhcCHhhCCCHHHHhhCHHHHhhcc
Confidence            1111     11111                     147889999999999999999999999999986544


No 132
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00  E-value=2.1e-42  Score=381.48  Aligned_cols=288  Identities=16%  Similarity=0.206  Sum_probs=195.6

Q ss_pred             CeEE-EEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCCCCCCChHHHHHHHHcCCCCCccEEEEEe-e
Q 005221          140 MYRL-ERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNTLGGSHGVPRVHFKG-R  217 (708)
Q Consensus       140 ~Y~i-~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~~~~~~~~Ei~il~~L~h~~~v~~~~~~~-~  217 (708)
                      .|++ .++||+|+||.||+|++..        ..+++.||||++.....  ...+.+|+.+|+.|+|+|+|..+..+. .
T Consensus        21 ~y~~~g~~lG~G~~g~Vy~~~~~~--------~~~~~~vaiK~~~~~~~--~~~~~~E~~~l~~l~hpniv~~~~~~~~~   90 (405)
T 3rgf_A           21 LFEYEGCKVGRGTYGHVYKAKRKD--------GKDDKDYALKQIEGTGI--SMSACREIALLRELKHPNVISLQKVFLSH   90 (405)
T ss_dssp             HEECSSCCCC-----EEEEEEESS--------SSCCCCEEEEECSSSSC--CHHHHHHHHHHHHCCCTTBCCCCEEEEET
T ss_pred             hhhhcCcEeeecCCeEEEEEEEcc--------CCCCeEEEEEEECCCCC--CHHHHHHHHHHHhcCCCCeeeEeeEEecC
Confidence            4777 4589999999999999763        11578899999875422  335778999999999999887777664 3


Q ss_pred             eCCEEEEEEecCCCCHHHHHhcc--------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCC
Q 005221          218 QGDYYVMVMDMLGPSLWDVWNNN--------SHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEK  289 (708)
Q Consensus       218 ~~~~~~lvme~~ggsL~~~l~~~--------~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~  289 (708)
                      .+..++|||||++++|.+++...        ...+++..++.|+.||+.||.|||++|||||||||+||||...++ ...
T Consensus        91 ~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~Dlkp~NIll~~~~~-~~~  169 (405)
T 3rgf_A           91 ADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGP-ERG  169 (405)
T ss_dssp             TTTEEEEEEECCSEEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECCSST-TTT
T ss_pred             CCCeEEEEEeCCCCCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCEeCCCcCHHHeEEecCCC-CCC
Confidence            57789999999999999988632        124999999999999999999999999999999999999954321 234


Q ss_pred             cEEEeccCccccccCCCCCccccccCCCceeeccccccchhhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCCC--
Q 005221          290 KLFLVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGR-TGSRRDDLESLAYTLIFLLRGRLPWQGYQGE--  366 (708)
Q Consensus       290 ~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~-~~s~~~DIwSlGviL~eLltG~~Pf~~~~~~--  366 (708)
                      .+||+|||+|+.........     ......+||+.|+|||++.+. .++.++|||||||+||+|++|++||.+....  
T Consensus       170 ~~kl~Dfg~a~~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~  244 (405)
T 3rgf_A          170 RVKIADMGFARLFNSPLKPL-----ADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIK  244 (405)
T ss_dssp             CEEECCTTCCC---------------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC----
T ss_pred             cEEEEECCCceecCCCCccc-----ccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCcccccc
Confidence            79999999998765432111     112346799999999999885 5899999999999999999999999875442  


Q ss_pred             -------CchhhhhhhccCCCCCCccCC--CChHHHHHHHHHHcCCCC-----------CcccHHHHHHHHHhhhCCCCC
Q 005221          367 -------NKGFLVCKKKMATSPDGLCCF--CPAPFRQFVEYVVNLKFD-----------EEPNYAKYISLFDGIVGPNPD  426 (708)
Q Consensus       367 -------~~~~~i~~~~~~~~p~~l~~~--~p~~~~~l~~~~~~~~~~-----------~rP~~~~l~~LL~~mL~~dP~  426 (708)
                             +....+......+....+...  .+.. ..+........+.           .......+++||.+||..||+
T Consensus       245 ~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~  323 (405)
T 3rgf_A          245 TSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEH-STLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPI  323 (405)
T ss_dssp             --CCCCHHHHHHHHHHHCCCCTTTCGGGGGSTTH-HHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGG
T ss_pred             ccccchHHHHHHHHHhhCCCChhhcchhhcCcch-hhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcc
Confidence                   122222222222222222111  1111 1111111000000           000124789999999999999


Q ss_pred             CCCcchHHHHhHHHHhcc
Q 005221          427 IRPISTEGAQKLIYQVGH  444 (708)
Q Consensus       427 ~Rps~~e~l~h~~f~~~~  444 (708)
                      +|||+.|+|+||||....
T Consensus       324 ~R~ta~e~L~hp~f~~~~  341 (405)
T 3rgf_A          324 KRITSEQAMQDPYFLEDP  341 (405)
T ss_dssp             GSCCHHHHHTSGGGTSSS
T ss_pred             cCCCHHHHhcChhhccCC
Confidence            999999999999997643


No 133
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00  E-value=1.4e-41  Score=367.62  Aligned_cols=276  Identities=19%  Similarity=0.206  Sum_probs=199.3

Q ss_pred             CCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCCCCCCChHHHHHHHHcCCCCCccEEEEEeee
Q 005221          139 PMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNTLGGSHGVPRVHFKGRQ  218 (708)
Q Consensus       139 ~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~~~~~~~~Ei~il~~L~h~~~v~~~~~~~~~  218 (708)
                      ++|++++.||+|+||.||+|++..          +++.||||++..... ......+|++.+..++|+|++..+..+...
T Consensus        23 ~~y~~~~~lg~G~~g~V~~~~~~~----------~~~~vavK~~~~~~~-~~~~~~~~~~~l~~l~h~niv~~~~~~~~~   91 (360)
T 3e3p_A           23 DRFQVERMAGQGTFGTVQLGKEKS----------TGMSVAIKKVIQDPR-FRNRELQIMQDLAVLHHPNIVQLQSYFYTL   91 (360)
T ss_dssp             TTEEEC----------CEEEEETT----------TCCEEEEEEEECCTT-CCCHHHHHHHHHHHHCCTTBCCEEEEEEEE
T ss_pred             cceEEEEEEecCCCeEEEEEEECC----------CCCEEEEEEEecCcc-ccHHHHHHHHHHHhcCCCCcccHHHhhhcc
Confidence            479999999999999999999977          789999999865432 233456677888889999988887776543


Q ss_pred             C------CEEEEEEecCCCCHHHHHhc---cCCCCCHHHHHHHHHHHHHHHHHHH--hCCceecCCCCCcEEeCC-CCCC
Q 005221          219 G------DYYVMVMDMLGPSLWDVWNN---NSHTMSIEMVACIAIEAISILEKMH--SKGYVHGDVKPENFLLGP-PGTP  286 (708)
Q Consensus       219 ~------~~~~lvme~~ggsL~~~l~~---~~~~l~~~~~~~i~~qil~aL~yLH--~~gIvHrDIKP~NILl~~-~g~~  286 (708)
                      +      .++++||||+.++|.+.+..   ....+++..++.++.||+.||.|||  ++||+||||||+||||+. ++  
T Consensus        92 ~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~ivH~Dlkp~NIll~~~~~--  169 (360)
T 3e3p_A           92 GERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADG--  169 (360)
T ss_dssp             CSSCTTCEEEEEEEECCSCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTCCBCSCCCGGGEEEETTTT--
T ss_pred             ccccccceeEEEEeecccccHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCCeecCcCCHHHEEEeCCCC--
Confidence            3      25899999998888776653   3457999999999999999999999  999999999999999986 44  


Q ss_pred             CCCcEEEeccCccccccCCCCCccccccCCCceeeccccccchhhhcCCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCC
Q 005221          287 DEKKLFLVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRT-GSRRDDLESLAYTLIFLLRGRLPWQGYQG  365 (708)
Q Consensus       287 ~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~-~s~~~DIwSlGviL~eLltG~~Pf~~~~~  365 (708)
                         .+||+|||+++........         ...+||+.|+|||++.+.. ++.++|||||||+||+|++|++||.+.+.
T Consensus       170 ---~~kl~Dfg~a~~~~~~~~~---------~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~  237 (360)
T 3e3p_A          170 ---TLKLCDFGSAKKLSPSEPN---------VAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNS  237 (360)
T ss_dssp             ---EEEECCCTTCBCCCTTSCC---------CSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred             ---cEEEeeCCCceecCCCCCc---------ccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCCh
Confidence               6999999999876554322         2345899999999997655 89999999999999999999999998765


Q ss_pred             CCchhhhhhhccCCCCCCccC------------CCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchH
Q 005221          366 ENKGFLVCKKKMATSPDGLCC------------FCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTE  433 (708)
Q Consensus       366 ~~~~~~i~~~~~~~~p~~l~~------------~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e  433 (708)
                      ......+......+..+.+..            .....+..+    ..  .........+.+||.+||..||.+|||+.|
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~--~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e  311 (360)
T 3e3p_A          238 AGQLHEIVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNV----FS--DHSLKDAKEAYDLLSALLQYLPEERMKPYE  311 (360)
T ss_dssp             HHHHHHHHHHHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHH----TT--TCCCTTHHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             HHHHHHHHHHcCCCCHHHHHhcccchhhccccccccCCcccc----cc--hhhccccHHHHHHHHHHhccCccccCCHHH
Confidence            554444443322211110000            000000000    00  000112368999999999999999999999


Q ss_pred             HHHhHHHHhccc
Q 005221          434 GAQKLIYQVGHK  445 (708)
Q Consensus       434 ~l~h~~f~~~~~  445 (708)
                      +|+||||+....
T Consensus       312 ~l~hp~f~~~~~  323 (360)
T 3e3p_A          312 ALCHPYFDELHD  323 (360)
T ss_dssp             HTTSGGGGGGGC
T ss_pred             HhcCccccccCC
Confidence            999999987654


No 134
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00  E-value=3e-42  Score=373.47  Aligned_cols=280  Identities=20%  Similarity=0.229  Sum_probs=214.3

Q ss_pred             CCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCC-CCCCCChHHHHHHHHcCCCCCccEEEEEe
Q 005221          138 SPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSK-GCNYGPPYEWQVYNTLGGSHGVPRVHFKG  216 (708)
Q Consensus       138 ~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~-~~~~~~~~Ei~il~~L~h~~~v~~~~~~~  216 (708)
                      .++|++++.||+|+||.||+|++..          ++..||+|++..... .....+.+|+.+|+.++|+|++..+. ++
T Consensus        32 ~~~y~~~~~lg~G~~g~V~~~~~~~----------~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~-~~  100 (360)
T 3eqc_A           32 DDDFEKISELGAGNGGVVFKVSHKP----------SGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYG-AF  100 (360)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETT----------TCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEE-EE
T ss_pred             cccceeeeeecCCCCeEEEEEEECC----------CCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeE-EE
Confidence            3479999999999999999999977          789999999986532 12335678999999999988666555 44


Q ss_pred             eeCCEEEEEEecC-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC-CceecCCCCCcEEeCCCCCCCCCcEEEe
Q 005221          217 RQGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSK-GYVHGDVKPENFLLGPPGTPDEKKLFLV  294 (708)
Q Consensus       217 ~~~~~~~lvme~~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~-gIvHrDIKP~NILl~~~g~~~~~~vkL~  294 (708)
                      ..++.+++||||+ |++|.+++...+ .+++..+..++.||+.||.|||++ ||+||||||+|||++.++     .+||+
T Consensus       101 ~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~-----~~kl~  174 (360)
T 3eqc_A          101 YSDGEISICMEHMDGGSLDQVLKKAG-RIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRG-----EIKLC  174 (360)
T ss_dssp             EETTEEEEEECCCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTC-----CEEEC
T ss_pred             EECCEEEEEEECCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHhCCEEcCCccHHHEEECCCC-----CEEEE
Confidence            6788899999999 889999998765 699999999999999999999996 999999999999999877     59999


Q ss_pred             ccCccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhh
Q 005221          295 DLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCK  374 (708)
Q Consensus       295 DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLltG~~Pf~~~~~~~~~~~i~~  374 (708)
                      |||++.......          ....+||+.|+|||++.+..++.++|||||||++|+|++|+.||...........+..
T Consensus       175 Dfg~~~~~~~~~----------~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~  244 (360)
T 3eqc_A          175 DFGVSGQLIDSM----------ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGC  244 (360)
T ss_dssp             CCCCCHHHHHHC--------------CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC-
T ss_pred             ECCCCccccccc----------ccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcc
Confidence            999997654321          1235699999999999999999999999999999999999999987544332221111


Q ss_pred             hccCCCCCC---------------ccCCCChHHHHHHHHHHcCCCCCccc---HHHHHHHHHhhhCCCCCCCCcchHHHH
Q 005221          375 KKMATSPDG---------------LCCFCPAPFRQFVEYVVNLKFDEEPN---YAKYISLFDGIVGPNPDIRPISTEGAQ  436 (708)
Q Consensus       375 ~~~~~~p~~---------------l~~~~p~~~~~l~~~~~~~~~~~rP~---~~~l~~LL~~mL~~dP~~Rps~~e~l~  436 (708)
                      .........               .....+..+..+++.+....+...+.   ...+.+||.+||..||++|||+.|+|+
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  324 (360)
T 3eqc_A          245 QVEGDAAETPPRPRTPGRPLNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMV  324 (360)
T ss_dssp             -----------------------------CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred             cccccCCCCCCCcccCCCcccccccCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence            000000000               00111122344555555554443332   357999999999999999999999999


Q ss_pred             hHHHHhcc
Q 005221          437 KLIYQVGH  444 (708)
Q Consensus       437 h~~f~~~~  444 (708)
                      ||||+...
T Consensus       325 hp~~~~~~  332 (360)
T 3eqc_A          325 HAFIKRSD  332 (360)
T ss_dssp             SHHHHHHH
T ss_pred             ChHhhcch
Confidence            99998654


No 135
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00  E-value=1.5e-41  Score=357.17  Aligned_cols=259  Identities=19%  Similarity=0.186  Sum_probs=209.6

Q ss_pred             CCCCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCC---CCCCChHHHHHHHHcCCCCCccEE
Q 005221          136 GGSPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKG---CNYGPPYEWQVYNTLGGSHGVPRV  212 (708)
Q Consensus       136 ~~~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~---~~~~~~~Ei~il~~L~h~~~v~~~  212 (708)
                      ...++|++.+.||+|+||.||+|++..          +++.||+|++......   ....+.+|+.+++.++|+|++..+
T Consensus        12 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~----------~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~   81 (294)
T 2rku_A           12 RSRRRYVRGRFLGKGGFAKCFEISDAD----------TKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH   81 (294)
T ss_dssp             TTTEEEEEEEEEEEETTEEEEEEEETT----------TCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEE
T ss_pred             CcccceEEEEEEeecCCEEEEEEEECC----------CCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeee
Confidence            345689999999999999999999977          7889999998765221   223467899999999998866655


Q ss_pred             EEEeeeCCEEEEEEecC-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcE
Q 005221          213 HFKGRQGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKL  291 (708)
Q Consensus       213 ~~~~~~~~~~~lvme~~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~v  291 (708)
                      . ++..++.+++|||++ +++|.+++.... .+++..++.++.||+.||.|||++||+||||||+|||++.++     .+
T Consensus        82 ~-~~~~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~-----~~  154 (294)
T 2rku_A           82 G-FFEDNDFVFVVLELCRRRSLLELHKRRK-ALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDL-----EV  154 (294)
T ss_dssp             E-EEECSSEEEEEEECCTTCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTC-----CE
T ss_pred             e-eeccCCEEEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEcCCC-----CE
Confidence            4 456788999999999 789999887654 699999999999999999999999999999999999999877     59


Q ss_pred             EEeccCccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCchhh
Q 005221          292 FLVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFL  371 (708)
Q Consensus       292 kL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLltG~~Pf~~~~~~~~~~~  371 (708)
                      ||+|||++.........        ....+||+.|+|||++.+..++.++|||||||++|+|++|+.||......+....
T Consensus       155 kl~dfg~~~~~~~~~~~--------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~  226 (294)
T 2rku_A          155 KIGDFGLATKVEYDGER--------KKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLR  226 (294)
T ss_dssp             EECCCTTCEECCSTTCC--------BCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHH
T ss_pred             EEEeccCceecccCccc--------cccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence            99999999876533221        1235699999999999999999999999999999999999999987543332222


Q ss_pred             hhhhccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhHHHHhccc
Q 005221          372 VCKKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKLIYQVGHK  445 (708)
Q Consensus       372 i~~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~~f~~~~~  445 (708)
                      +......     ++..++                     ..+.+||.+||..||++|||+.|+++|+||.....
T Consensus       227 ~~~~~~~-----~~~~~~---------------------~~~~~li~~~l~~~p~~Rps~~~ll~~~~~~~~~~  274 (294)
T 2rku_A          227 IKKNEYS-----IPKHIN---------------------PVAASLIQKMLQTDPTARPTINELLNDEFFTSGYI  274 (294)
T ss_dssp             HHTTCCC-----CCTTSC---------------------HHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHTSCC
T ss_pred             HhhccCC-----CccccC---------------------HHHHHHHHHHcccChhhCcCHHHHhhChheecCCc
Confidence            2221110     111111                     46889999999999999999999999999986654


No 136
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00  E-value=2.1e-43  Score=385.68  Aligned_cols=247  Identities=11%  Similarity=0.059  Sum_probs=190.6

Q ss_pred             CCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCC---CCCCCChHHHH---HHHHcCCCCCccE
Q 005221          138 SPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSK---GCNYGPPYEWQ---VYNTLGGSHGVPR  211 (708)
Q Consensus       138 ~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~---~~~~~~~~Ei~---il~~L~h~~~v~~  211 (708)
                      .++|++.+.||+|+||.||+|++..          +++.||||++.....   .....+.+|+.   +|+.++|+|+|..
T Consensus        72 ~~~y~~~~~lG~G~~g~V~~a~~~~----------~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~  141 (377)
T 3byv_A           72 PRTLVRGTVLGQEDPYAYLEATDQE----------TGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKV  141 (377)
T ss_dssp             CEEEEEEEEEEEETTEEEEEEEC-C----------CCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHH
T ss_pred             CceEEEcceeecCCCEEEEEEEECC----------CCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHH
Confidence            3579999999999999999999877          789999999985422   22235678995   4555578886655


Q ss_pred             E-------EEEeeeCC-----------------EEEEEEecCCCCHHHHHhccCCCCC-------HHHHHHHHHHHHHHH
Q 005221          212 V-------HFKGRQGD-----------------YYVMVMDMLGPSLWDVWNNNSHTMS-------IEMVACIAIEAISIL  260 (708)
Q Consensus       212 ~-------~~~~~~~~-----------------~~~lvme~~ggsL~~~l~~~~~~l~-------~~~~~~i~~qil~aL  260 (708)
                      +       ..+ ...+                 ..||||||++|+|.+++...+ .++       +..++.|+.||+.||
T Consensus       142 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~~g~L~~~l~~~~-~~~~~~~~l~~~~~~~i~~qi~~aL  219 (377)
T 3byv_A          142 HLRFIFPFDLV-KDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLL-SHSSTHKSLVHHARLQLTLQVIRLL  219 (377)
T ss_dssp             HHCBCCCSEEE-ECTTSCSEEEC------CEEESEEEEEECCSEEHHHHHHHHH-HTTTTTHHHHHHHHHHHHHHHHHHH
T ss_pred             Hhhhhhhhhhh-hccCCccccccccCCCceEEEEEEEEEeccCCCHHHHHHhcc-ccccccccccHHHHHHHHHHHHHHH
Confidence            4       332 2221                 388999999999999998653 244       488889999999999


Q ss_pred             HHHHhCCceecCCCCCcEEeCCCCCCCCCcEEEeccCccccccCCCCCccccccCCCceeeccccccchhhhcCC-----
Q 005221          261 EKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGR-----  335 (708)
Q Consensus       261 ~yLH~~gIvHrDIKP~NILl~~~g~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~-----  335 (708)
                      +|||++|||||||||+||||+.++     .+||+|||+|+.....           ....+| +.|+|||++.+.     
T Consensus       220 ~~LH~~~ivHrDikp~NIll~~~~-----~~kL~DFG~a~~~~~~-----------~~~~~g-~~y~aPE~~~~~~~~~~  282 (377)
T 3byv_A          220 ASLHHYGLVHTYLRPVDIVLDQRG-----GVFLTGFEHLVRDGAR-----------VVSSVS-RGFEPPELEARRATISY  282 (377)
T ss_dssp             HHHHHTTEECSCCCGGGEEECTTC-----CEEECCGGGCEETTCE-----------EECCCC-TTCCCHHHHHHHTSTHH
T ss_pred             HHHHhCCeecCCCCHHHEEEcCCC-----CEEEEechhheecCCc-----------ccCCCC-cCccChhhhcccccccc
Confidence            999999999999999999999877     5999999999853321           123568 999999999988     


Q ss_pred             ------CCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhhccCCCCCCccCCCChHHHHHHHHHHcCCCCCccc
Q 005221          336 ------TGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCKKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPN  409 (708)
Q Consensus       336 ------~~s~~~DIwSlGviL~eLltG~~Pf~~~~~~~~~~~i~~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~  409 (708)
                            .++.++|||||||+||+|++|+.||.+.........+....         ..+|                    
T Consensus       283 ~~~~~~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~---------~~~~--------------------  333 (377)
T 3byv_A          283 HRDRRTLMTFSFDAWALGLVIYWIWCADLPITKDAALGGSEWIFRSC---------KNIP--------------------  333 (377)
T ss_dssp             HHCCEEECCHHHHHHHHHHHHHHHHHSSCCC------CCSGGGGSSC---------CCCC--------------------
T ss_pred             cccccccCChhhhHHHHHHHHHHHHHCCCCCcccccccchhhhhhhc---------cCCC--------------------
Confidence                  89999999999999999999999998765444322221110         1111                    


Q ss_pred             HHHHHHHHHhhhCCCCCCCCcchHHHHhHHHHhc
Q 005221          410 YAKYISLFDGIVGPNPDIRPISTEGAQKLIYQVG  443 (708)
Q Consensus       410 ~~~l~~LL~~mL~~dP~~Rps~~e~l~h~~f~~~  443 (708)
                       ..+.+||.+||..||++||++.|+++||||+..
T Consensus       334 -~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~~  366 (377)
T 3byv_A          334 -QPVRALLEGFLRYPKEDRLLPLQAMETPEYEQL  366 (377)
T ss_dssp             -HHHHHHHHHHTCSSGGGCCCHHHHHTSHHHHHH
T ss_pred             -HHHHHHHHHHcCCCchhCCCHHHHhhChHHHHH
Confidence             478899999999999999999999999999754


No 137
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00  E-value=9.9e-42  Score=371.12  Aligned_cols=255  Identities=18%  Similarity=0.215  Sum_probs=203.5

Q ss_pred             CCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCCC--------CCCChHHHHHHHHc-CCCCCc
Q 005221          139 PMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGC--------NYGPPYEWQVYNTL-GGSHGV  209 (708)
Q Consensus       139 ~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~~--------~~~~~~Ei~il~~L-~h~~~v  209 (708)
                      ++|++.+.||+|+||.||+|++..          +++.||||++.......        ...+.+|+.+++++ +|+|++
T Consensus        94 ~~y~~~~~lg~G~~g~Vy~a~~~~----------~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv  163 (365)
T 2y7j_A           94 QKYDPKDVIGRGVSSVVRRCVHRA----------TGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHII  163 (365)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETT----------TCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBC
T ss_pred             hhcccceEEecCCCEEEEEEEECC----------CCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEe
Confidence            469999999999999999999976          78999999998654221        22456899999999 677755


Q ss_pred             cEEEEEeeeCCEEEEEEecC-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCC
Q 005221          210 PRVHFKGRQGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDE  288 (708)
Q Consensus       210 ~~~~~~~~~~~~~~lvme~~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~  288 (708)
                      .. ..++......+|||||+ |++|.+++.... .+++..++.++.||+.||.|||++||+||||||+|||++.++    
T Consensus       164 ~~-~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~-~l~~~~~~~i~~qi~~~L~~LH~~gi~H~Dlkp~NIl~~~~~----  237 (365)
T 2y7j_A          164 TL-IDSYESSSFMFLVFDLMRKGELFDYLTEKV-ALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNM----  237 (365)
T ss_dssp             CE-EEEEEBSSEEEEEECCCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTC----
T ss_pred             EE-EEEEeeCCEEEEEEEeCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCC----
Confidence            54 45557788999999999 889999998654 699999999999999999999999999999999999999877    


Q ss_pred             CcEEEeccCccccccCCCCCccccccCCCceeeccccccchhhhcC------CCCCchhhHHHHHHHHHHHHhCCCCCCC
Q 005221          289 KKLFLVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLG------RTGSRRDDLESLAYTLIFLLRGRLPWQG  362 (708)
Q Consensus       289 ~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~------~~~s~~~DIwSlGviL~eLltG~~Pf~~  362 (708)
                       .+||+|||++..+.....         ....+||+.|+|||++.+      ..++.++|||||||+||+|++|+.||.+
T Consensus       238 -~ikl~DfG~~~~~~~~~~---------~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~  307 (365)
T 2y7j_A          238 -QIRLSDFGFSCHLEPGEK---------LRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWH  307 (365)
T ss_dssp             -CEEECCCTTCEECCTTCC---------BCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             -CEEEEecCcccccCCCcc---------cccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCC
Confidence             599999999987654322         123569999999999864      3588999999999999999999999987


Q ss_pred             CCCCCchhhhhhhccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhHHHH
Q 005221          363 YQGENKGFLVCKKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKLIYQ  441 (708)
Q Consensus       363 ~~~~~~~~~i~~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~~f~  441 (708)
                      .........+...........+                    ..  ....+.+||.+||..||++||++.|+|+||||+
T Consensus       308 ~~~~~~~~~i~~~~~~~~~~~~--------------------~~--~~~~~~~li~~~L~~dP~~Rps~~ell~hp~f~  364 (365)
T 2y7j_A          308 RRQILMLRMIMEGQYQFSSPEW--------------------DD--RSSTVKDLISRLLQVDPEARLTAEQALQHPFFE  364 (365)
T ss_dssp             SSHHHHHHHHHHTCCCCCHHHH--------------------SS--SCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGC
T ss_pred             CCHHHHHHHHHhCCCCCCCccc--------------------cc--CCHHHHHHHHHHcCCChhHCcCHHHHhcCcccC
Confidence            5433322222222211110000                    00  124689999999999999999999999999985


No 138
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00  E-value=2.3e-41  Score=360.86  Aligned_cols=259  Identities=22%  Similarity=0.263  Sum_probs=199.7

Q ss_pred             CCCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCCCCCCChHHHHHHHHc-CCCCCccEEEEE
Q 005221          137 GSPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNTL-GGSHGVPRVHFK  215 (708)
Q Consensus       137 ~~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~~~~~~~~Ei~il~~L-~h~~~v~~~~~~  215 (708)
                      ..++|++++.||+|+||.||+|++..          +++.||||++..... ....+.+|+.+++++ +|+|++..+..+
T Consensus        22 ~~~~y~~~~~lg~G~~g~Vy~~~~~~----------~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~~h~~i~~~~~~~   90 (326)
T 2x7f_A           22 PAGIFELVELVGNGTYGQVYKGRHVK----------TGQLAAIKVMDVTGD-EEEEIKQEINMLKKYSHHRNIATYYGAF   90 (326)
T ss_dssp             CTTTEEEEEEEEEETTEEEEEEEETT----------TCCEEEEEEEECCSS-TTHHHHHHHHHHHHHCCSTTBCCEEEEE
T ss_pred             CCCcEEEEEEeccCCCEEEEEEEECC----------CCCeEEEEEEecCcc-cHHHHHHHHHHHHhccCCCCeeeeeeEE
Confidence            35689999999999999999999977          789999999876533 234678899999999 677766665555


Q ss_pred             eee-----CCEEEEEEecC-CCCHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCC
Q 005221          216 GRQ-----GDYYVMVMDML-GPSLWDVWNNN-SHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDE  288 (708)
Q Consensus       216 ~~~-----~~~~~lvme~~-ggsL~~~l~~~-~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~  288 (708)
                      ...     .+.+++||||+ +++|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++.++    
T Consensus        91 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~----  166 (326)
T 2x7f_A           91 IKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENA----  166 (326)
T ss_dssp             EECC--CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTC----
T ss_pred             eeccCccccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCcHHHEEEcCCC----
Confidence            432     57899999999 77999999764 34699999999999999999999999999999999999998777    


Q ss_pred             CcEEEeccCccccccCCCCCccccccCCCceeeccccccchhhhc-----CCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Q 005221          289 KKLFLVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHL-----GRTGSRRDDLESLAYTLIFLLRGRLPWQGY  363 (708)
Q Consensus       289 ~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~-----~~~~s~~~DIwSlGviL~eLltG~~Pf~~~  363 (708)
                       .+||+|||++........        .....+||+.|+|||++.     +..++.++|||||||+||+|++|+.||.+.
T Consensus       167 -~~kl~Dfg~~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~  237 (326)
T 2x7f_A          167 -EVKLVDFGVSAQLDRTVG--------RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDM  237 (326)
T ss_dssp             -CEEECCCTTTC---------------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTS
T ss_pred             -CEEEeeCcCceecCcCcc--------ccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCC
Confidence             599999999987644321        112456999999999987     567899999999999999999999999875


Q ss_pred             CCCCchhhhhhhccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhHHHHhc
Q 005221          364 QGENKGFLVCKKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKLIYQVG  443 (708)
Q Consensus       364 ~~~~~~~~i~~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~~f~~~  443 (708)
                      ........+....   .+......++                     ..+.+||.+||..||.+||++.++++||||...
T Consensus       238 ~~~~~~~~~~~~~---~~~~~~~~~~---------------------~~l~~li~~~l~~dp~~Rps~~~ll~hp~~~~~  293 (326)
T 2x7f_A          238 HPMRALFLIPRNP---APRLKSKKWS---------------------KKFQSFIESCLVKNHSQRPATEQLMKHPFIRDQ  293 (326)
T ss_dssp             CHHHHHHHHHHSC---CCCCSCSCSC---------------------HHHHHHHHHHCCSSGGGSCCHHHHHTSHHHHCC
T ss_pred             cHHHHHHHhhcCc---cccCCccccC---------------------HHHHHHHHHHhccChhhCCCHHHHhhChHHhhC
Confidence            5433322222211   1111111122                     478899999999999999999999999998754


No 139
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00  E-value=1.2e-41  Score=354.75  Aligned_cols=254  Identities=19%  Similarity=0.209  Sum_probs=197.9

Q ss_pred             CCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCC--CCCCChHHHHHHHHc-CCCCCccEEEEE
Q 005221          139 PMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKG--CNYGPPYEWQVYNTL-GGSHGVPRVHFK  215 (708)
Q Consensus       139 ~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~--~~~~~~~Ei~il~~L-~h~~~v~~~~~~  215 (708)
                      ++|++++.||+|+||.||+|++..          +++.||||++......  ....+.+|+.++..+ +|+|++. +..+
T Consensus        11 ~~y~~~~~lg~G~~g~V~~~~~~~----------~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~-~~~~   79 (289)
T 1x8b_A           11 TEFHELEKIGSGEFGSVFKCVKRL----------DGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVR-YFSA   79 (289)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETT----------TCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCC-EEEE
T ss_pred             chhhhhhhhcCCCceEEEEEEEcC----------CCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeee-eeee
Confidence            469999999999999999999977          7899999998865322  233567899999999 6776555 5555


Q ss_pred             eeeCCEEEEEEecC-CCCHHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCC-----
Q 005221          216 GRQGDYYVMVMDML-GPSLWDVWNNN---SHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTP-----  286 (708)
Q Consensus       216 ~~~~~~~~lvme~~-ggsL~~~l~~~---~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~-----  286 (708)
                      +...+.+++||||+ +++|.+++...   ...+++..++.|+.||+.||.|||++||+||||||+|||++.++.+     
T Consensus        80 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~~~~~~  159 (289)
T 1x8b_A           80 WAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASE  159 (289)
T ss_dssp             EEETTEEEEEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC----------
T ss_pred             eecCCeEEEEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCCEeecCCCHHHEEEcCCCCCccccc
Confidence            67888999999999 88999999764   2469999999999999999999999999999999999999865521     


Q ss_pred             ---------CCCcEEEeccCccccccCCCCCccccccCCCceeeccccccchhhhcCC-CCCchhhHHHHHHHHHHHHhC
Q 005221          287 ---------DEKKLFLVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGR-TGSRRDDLESLAYTLIFLLRG  356 (708)
Q Consensus       287 ---------~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~-~~s~~~DIwSlGviL~eLltG  356 (708)
                               ....+||+|||++.......            ...||+.|+|||++.+. .++.++|||||||++|+|++|
T Consensus       160 ~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~------------~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~  227 (289)
T 1x8b_A          160 EGDEDDWASNKVMFKIGDLGHVTRISSPQ------------VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGA  227 (289)
T ss_dssp             ----------CCCEEECCCTTCEETTCSC------------CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTC
T ss_pred             ccccccccCCceEEEEcccccccccCCcc------------ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcC
Confidence                     33469999999998765432            23499999999999876 567899999999999999999


Q ss_pred             CCCCCCCCCCCchhhhhhhccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHH
Q 005221          357 RLPWQGYQGENKGFLVCKKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQ  436 (708)
Q Consensus       357 ~~Pf~~~~~~~~~~~i~~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~  436 (708)
                      .+|+....   ....+........    +..++                     ..+.+||.+||..||++|||+.|+++
T Consensus       228 ~~~~~~~~---~~~~~~~~~~~~~----~~~~~---------------------~~~~~li~~~l~~dp~~Rps~~~ll~  279 (289)
T 1x8b_A          228 EPLPRNGD---QWHEIRQGRLPRI----PQVLS---------------------QEFTELLKVMIHPDPERRPSAMALVK  279 (289)
T ss_dssp             CCCCSSSH---HHHHHHTTCCCCC----SSCCC---------------------HHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             CCCCcchh---HHHHHHcCCCCCC----CcccC---------------------HHHHHHHHHHhCCCcccCCCHHHHhh
Confidence            98875421   2222222222111    11222                     47889999999999999999999999


Q ss_pred             hHHHHhc
Q 005221          437 KLIYQVG  443 (708)
Q Consensus       437 h~~f~~~  443 (708)
                      ||||...
T Consensus       280 h~~~~~~  286 (289)
T 1x8b_A          280 HSVLLSA  286 (289)
T ss_dssp             CTTC---
T ss_pred             ChHhhhh
Confidence            9998754


No 140
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00  E-value=4.5e-42  Score=364.13  Aligned_cols=282  Identities=17%  Similarity=0.141  Sum_probs=204.3

Q ss_pred             CCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCCCCCCChHHHHHHHHcCCCCCccEEEEEe-
Q 005221          138 SPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNTLGGSHGVPRVHFKG-  216 (708)
Q Consensus       138 ~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~~~~~~~~Ei~il~~L~h~~~v~~~~~~~-  216 (708)
                      .++|++++.||+|+||.||+|++..          +++.||||++..........+.+|+.+++.|+|+|++..+..+. 
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~----------~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~   79 (320)
T 2i6l_A           10 GSRYMDLKPLGCGGNGLVFSAVDND----------CDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGP   79 (320)
T ss_dssp             TTTEEEEEECC-----CEEEEEETT----------TTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECT
T ss_pred             CCceeEEEEeccCCCeEEEEEEECC----------CCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccc
Confidence            3589999999999999999999977          78999999987654333445778999999999999888776653 


Q ss_pred             ------------eeCCEEEEEEecCCCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCC
Q 005221          217 ------------RQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPG  284 (708)
Q Consensus       217 ------------~~~~~~~lvme~~ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g  284 (708)
                                  .....+++|||+++++|.+++..  ..+++..++.++.||+.||+|||++||+||||||+|||++..+
T Consensus        80 ~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~  157 (320)
T 2i6l_A           80 SGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQ--GPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTED  157 (320)
T ss_dssp             TSCBCCC----CCSCSEEEEEEECCSEEHHHHHTT--CCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTT
T ss_pred             cccccccccccccccCceeEEeeccCCCHHHHhhc--CCccHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCC
Confidence                        34578999999998899999875  3599999999999999999999999999999999999997443


Q ss_pred             CCCCCcEEEeccCccccccCCCCCccccccCCCceeeccccccchhhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCC
Q 005221          285 TPDEKKLFLVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLG-RTGSRRDDLESLAYTLIFLLRGRLPWQGY  363 (708)
Q Consensus       285 ~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~-~~~s~~~DIwSlGviL~eLltG~~Pf~~~  363 (708)
                          ..+||+|||+++.........     .......||+.|+|||++.+ ..++.++|||||||+||+|++|+.||.+.
T Consensus       158 ----~~~kl~Dfg~~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~  228 (320)
T 2i6l_A          158 ----LVLKIGDFGLARIMDPHYSHK-----GHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGA  228 (320)
T ss_dssp             ----TEEEECCCTTCBCC-------------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             ----CeEEEccCccccccCCCcccc-----cccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCC
Confidence                269999999998765432111     11223458999999999876 67899999999999999999999999986


Q ss_pred             CCCCchhhhhhhccCCCCCC---ccCCCChHHHHHHHHHHcCCCCC----cc-cHHHHHHHHHhhhCCCCCCCCcchHHH
Q 005221          364 QGENKGFLVCKKKMATSPDG---LCCFCPAPFRQFVEYVVNLKFDE----EP-NYAKYISLFDGIVGPNPDIRPISTEGA  435 (708)
Q Consensus       364 ~~~~~~~~i~~~~~~~~p~~---l~~~~p~~~~~l~~~~~~~~~~~----rP-~~~~l~~LL~~mL~~dP~~Rps~~e~l  435 (708)
                      ........+...........   +....+..    +..........    .+ -...+.+||.+||..||++|||+.|+|
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell  304 (320)
T 2i6l_A          229 HELEQMQLILESIPVVHEEDRQELLSVIPVY----IRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEAL  304 (320)
T ss_dssp             SHHHHHHHHHHHSCCCCHHHHHHHHTTSCHH----HHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHH
T ss_pred             CHHHHHHHHHHhcCCCchhhhhhhhhcCccc----ccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHh
Confidence            65443333332211100000   00001110    00000000000    01 125799999999999999999999999


Q ss_pred             HhHHHHhcc
Q 005221          436 QKLIYQVGH  444 (708)
Q Consensus       436 ~h~~f~~~~  444 (708)
                      +||||+...
T Consensus       305 ~hp~~~~~~  313 (320)
T 2i6l_A          305 SHPYMSIYS  313 (320)
T ss_dssp             TSHHHHTTC
T ss_pred             CCccccccc
Confidence            999998543


No 141
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00  E-value=2.1e-41  Score=355.23  Aligned_cols=255  Identities=18%  Similarity=0.226  Sum_probs=203.1

Q ss_pred             CCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCC--CCCCCCChHHHHHHHHcCCCCCccEEEEE
Q 005221          138 SPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSS--KGCNYGPPYEWQVYNTLGGSHGVPRVHFK  215 (708)
Q Consensus       138 ~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~--~~~~~~~~~Ei~il~~L~h~~~v~~~~~~  215 (708)
                      ...|++.+.||+|+||.||+|++..          ++..||+|++....  ......+.+|+.+|+.|+|+|++..+..+
T Consensus        25 ~~~~~~~~~lg~G~~g~Vy~~~~~~----------~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~   94 (290)
T 1t4h_A           25 GRFLKFDIEIGRGSFKTVYKGLDTE----------TTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSW   94 (290)
T ss_dssp             SCEEEEEEEEEECSSEEEEEEEETT----------TCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE
T ss_pred             ceeEEeeeeccCCCCeEEEEeEecC----------CceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeee
Confidence            4469999999999999999999977          78999999987542  11233467899999999999988877765


Q ss_pred             ee---eCCEEEEEEecC-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC--ceecCCCCCcEEeC-CCCCCCC
Q 005221          216 GR---QGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKG--YVHGDVKPENFLLG-PPGTPDE  288 (708)
Q Consensus       216 ~~---~~~~~~lvme~~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~g--IvHrDIKP~NILl~-~~g~~~~  288 (708)
                      ..   ....+++||||+ +++|.+++.... .+++..++.++.||+.||.|||++|  |+||||||+|||++ .++    
T Consensus        95 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~----  169 (290)
T 1t4h_A           95 ESTVKGKKCIVLVTELMTSGTLKTYLKRFK-VMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTG----  169 (290)
T ss_dssp             EEESSSCEEEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTS----
T ss_pred             ccccCCCceEEEEEEecCCCCHHHHHHHcc-CCCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEEECCCC----
Confidence            43   357899999999 889999998754 6999999999999999999999999  99999999999997 444    


Q ss_pred             CcEEEeccCccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCc
Q 005221          289 KKLFLVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENK  368 (708)
Q Consensus       289 ~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLltG~~Pf~~~~~~~~  368 (708)
                       .+||+|||++.......          ....+||+.|+|||++.+ .++.++|||||||++|+|++|+.||........
T Consensus       170 -~~kl~Dfg~~~~~~~~~----------~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~  237 (290)
T 1t4h_A          170 -SVKIGDLGLATLKRASF----------AKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQ  237 (290)
T ss_dssp             -CEEECCTTGGGGCCTTS----------BEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHH
T ss_pred             -CEEEeeCCCcccccccc----------cccccCCcCcCCHHHHhc-cCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHH
Confidence             69999999997544321          123569999999998875 589999999999999999999999987543322


Q ss_pred             hhhhhhhccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhHHHHh
Q 005221          369 GFLVCKKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKLIYQV  442 (708)
Q Consensus       369 ~~~i~~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~~f~~  442 (708)
                      .......  ...+..+....                     ...+.+||.+||..||.+|||+.|+++||||+.
T Consensus       238 ~~~~~~~--~~~~~~~~~~~---------------------~~~l~~li~~~l~~dp~~Rps~~ell~h~~f~~  288 (290)
T 1t4h_A          238 IYRRVTS--GVKPASFDKVA---------------------IPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQE  288 (290)
T ss_dssp             HHHHHTT--TCCCGGGGGCC---------------------CHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC-
T ss_pred             HHHHHhc--cCCccccCCCC---------------------CHHHHHHHHHHccCChhhCCCHHHHhhCccccc
Confidence            2211111  11111111111                     147899999999999999999999999999864


No 142
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00  E-value=2.4e-41  Score=361.53  Aligned_cols=258  Identities=18%  Similarity=0.207  Sum_probs=201.8

Q ss_pred             CCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCC-CCCCCCChHHHHHHHHcCCCCCccEEEEEe
Q 005221          138 SPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSS-KGCNYGPPYEWQVYNTLGGSHGVPRVHFKG  216 (708)
Q Consensus       138 ~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~-~~~~~~~~~Ei~il~~L~h~~~v~~~~~~~  216 (708)
                      ..+|++++.||+|+||.||+|++.....      ....+||+|.+.... ......+.+|+.+++.++|+|++..+..+ 
T Consensus        12 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~------~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~-   84 (325)
T 3kex_A           12 ETELRKLKVLGSGVFGTVHKGVWIPEGE------SIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLC-   84 (325)
T ss_dssp             TTTEEEEEEEECCSSCEEEEEEECCTTC------SCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEE-
T ss_pred             HhHceeeeeeeecCCceEEEEEEcCCCc------eEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEE-
Confidence            4579999999999999999999876111      123458888876543 33445788999999999999988777655 


Q ss_pred             eeCCEEEEEEecC-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcEEEec
Q 005221          217 RQGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVD  295 (708)
Q Consensus       217 ~~~~~~~lvme~~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~vkL~D  295 (708)
                      . +...++||||+ +++|.+++......+++..++.++.||+.||.|||++||+||||||+|||++.++     .+||+|
T Consensus        85 ~-~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~-----~~kl~D  158 (325)
T 3kex_A           85 P-GSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPS-----QVQVAD  158 (325)
T ss_dssp             C-BSSEEEEEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHHHTTCCCSCCSSTTEEESSSS-----CEEECS
T ss_pred             c-CCccEEEEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHHhCCCCCCccchheEEECCCC-----eEEECC
Confidence            3 44578889998 8999999987656799999999999999999999999999999999999998877     599999


Q ss_pred             cCccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCCchhhhhh
Q 005221          296 LGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLR-GRLPWQGYQGENKGFLVCK  374 (708)
Q Consensus       296 FGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLlt-G~~Pf~~~~~~~~~~~i~~  374 (708)
                      ||+++..........      .....||+.|+|||++.+..++.++|||||||+||+|++ |+.||.+.........+..
T Consensus       159 fg~a~~~~~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~  232 (325)
T 3kex_A          159 FGVADLLPPDDKQLL------YSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEK  232 (325)
T ss_dssp             CSGGGGSCCCTTCCC-----------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHHHHHHHT
T ss_pred             CCcccccCccccccc------ccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHHHHHHHc
Confidence            999998755432211      124568899999999999999999999999999999999 9999998665554444433


Q ss_pred             hccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhHH
Q 005221          375 KKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKLI  439 (708)
Q Consensus       375 ~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~~  439 (708)
                      ......+.    .++                     ..+.+||.+||..||.+||++.++++++-
T Consensus       233 ~~~~~~~~----~~~---------------------~~~~~li~~~l~~dp~~Rps~~el~~~l~  272 (325)
T 3kex_A          233 GERLAQPQ----ICT---------------------IDVYMVMVKCWMIDENIRPTFKELANEFT  272 (325)
T ss_dssp             TCBCCCCT----TBC---------------------TTTTHHHHHHTCSCTTTSCCHHHHHHHHH
T ss_pred             CCCCCCCC----cCc---------------------HHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence            32222221    122                     25678888899999999999999888853


No 143
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00  E-value=8.6e-42  Score=361.98  Aligned_cols=213  Identities=16%  Similarity=0.126  Sum_probs=176.4

Q ss_pred             CCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCCCCCCChHHHHHHHHcCCCCCccEEEEEee
Q 005221          138 SPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNTLGGSHGVPRVHFKGR  217 (708)
Q Consensus       138 ~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~~~~~~~~Ei~il~~L~h~~~v~~~~~~~~  217 (708)
                      .++|++.+.||+|+||.||+|++..          ++..||+|++..........+.+|+.++++|+|+|++..+.. +.
T Consensus         9 ~~~~~~~~~lG~G~~g~V~~~~~~~----------~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~-~~   77 (310)
T 3s95_A            9 PSDLIHGEVLGKGCFGQAIKVTHRE----------TGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGV-LY   77 (310)
T ss_dssp             GGGEEEEEEEECCSSEEEEEEEETT----------TCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEE-EE
T ss_pred             hhHeeccceecCCCCEEEEEEEECC----------CCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEE-Ee
Confidence            3479999999999999999999977          789999999866544444567889999999999886665555 46


Q ss_pred             eCCEEEEEEecC-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcEEEecc
Q 005221          218 QGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDL  296 (708)
Q Consensus       218 ~~~~~~lvme~~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~vkL~DF  296 (708)
                      .++.+++||||+ +++|.+++......+++..+..++.||+.||.|||++||+||||||+|||++.++     .+||+||
T Consensus        78 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nil~~~~~-----~~kl~Df  152 (310)
T 3s95_A           78 KDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENK-----NVVVADF  152 (310)
T ss_dssp             ETTEEEEEEECCTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEECTTS-----CEEECCC
T ss_pred             cCCeeEEEEEecCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCcCeEEECCCC-----CEEEeec
Confidence            778899999999 8899999988767899999999999999999999999999999999999999877     5999999


Q ss_pred             CccccccCCCCCccc------cccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCC
Q 005221          297 GLATKWRDSTTGMHV------EYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGE  366 (708)
Q Consensus       297 Gla~~~~~~~~~~~~------~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLltG~~Pf~~~~~~  366 (708)
                      |+++...........      .........+||+.|+|||++.+..++.++|||||||+||+|++|..||......
T Consensus       153 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~  228 (310)
T 3s95_A          153 GLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPR  228 (310)
T ss_dssp             TTCEECC--------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCB
T ss_pred             ccceecccccccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhh
Confidence            999876554322110      0001112467999999999999999999999999999999999999999875443


No 144
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00  E-value=1.6e-41  Score=353.00  Aligned_cols=254  Identities=21%  Similarity=0.204  Sum_probs=198.2

Q ss_pred             CCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCC---CCCCCCChHHHHHHHHcCCCCCccEEEEE
Q 005221          139 PMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSS---KGCNYGPPYEWQVYNTLGGSHGVPRVHFK  215 (708)
Q Consensus       139 ~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~---~~~~~~~~~Ei~il~~L~h~~~v~~~~~~  215 (708)
                      ++|++++.||+|+||.||+|++..          +++.||||++....   ......+.+|+.+++.++|+|++..+.. 
T Consensus        11 ~~y~i~~~lg~G~~g~V~~~~~~~----------~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~-   79 (276)
T 2h6d_A           11 GHYVLGDTLGVGTFGKVKIGEHQL----------TGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQV-   79 (276)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETT----------TCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEE-
T ss_pred             ccEEEEeeecCCCCeEEEEEEECC----------CCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEE-
Confidence            479999999999999999999976          78999999987642   2223356789999999999886665554 


Q ss_pred             eeeCCEEEEEEecC-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcEEEe
Q 005221          216 GRQGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLV  294 (708)
Q Consensus       216 ~~~~~~~~lvme~~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~vkL~  294 (708)
                      ....+.+++|||++ +++|.+++...+ .+++..++.++.||+.||.|||++||+||||||+|||++.++     .+||+
T Consensus        80 ~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~-----~~~l~  153 (276)
T 2h6d_A           80 ISTPTDFFMVMEYVSGGELFDYICKHG-RVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHM-----NAKIA  153 (276)
T ss_dssp             EECSSEEEEEEECCCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHHCSSCCCCCGGGEEECTTS-----CEEEC
T ss_pred             EecCCeEEEEEeccCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChhhEEECCCC-----CEEEe
Confidence            56778899999999 889999998765 699999999999999999999999999999999999998877     59999


Q ss_pred             ccCccccccCCCCCccccccCCCceeeccccccchhhhcCCCC-CchhhHHHHHHHHHHHHhCCCCCCCCCCCCchhhhh
Q 005221          295 DLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTG-SRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVC  373 (708)
Q Consensus       295 DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~-s~~~DIwSlGviL~eLltG~~Pf~~~~~~~~~~~i~  373 (708)
                      |||++........         ....+||+.|+|||++.+..+ +.++|||||||++|+|++|+.||...........+.
T Consensus       154 dfg~~~~~~~~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~  224 (276)
T 2h6d_A          154 DFGLSNMMSDGEF---------LRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIR  224 (276)
T ss_dssp             CCCGGGCCCC----------------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH
T ss_pred             ecccccccCCCcc---------eecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhh
Confidence            9999987654321         123569999999999998876 689999999999999999999998644322222221


Q ss_pred             hhccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhHHHHhcc
Q 005221          374 KKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKLIYQVGH  444 (708)
Q Consensus       374 ~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~~f~~~~  444 (708)
                      .... .    ++..+                     ...+.+||.+||..||.+|||+.|+++||||....
T Consensus       225 ~~~~-~----~~~~~---------------------~~~l~~li~~~l~~~p~~Rps~~~~l~h~~~~~~~  269 (276)
T 2h6d_A          225 GGVF-Y----IPEYL---------------------NRSVATLLMHMLQVDPLKRATIKDIREHEWFKQDL  269 (276)
T ss_dssp             HCCC-C----CCTTS---------------------CHHHHHHHHHHTCSSGGGSCCHHHHHHSHHHHTTC
T ss_pred             cCcc-c----Cchhc---------------------CHHHHHHHHHHccCChhhCCCHHHHHhChhhccCc
Confidence            1111 0    01111                     14688999999999999999999999999997654


No 145
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00  E-value=2e-41  Score=356.39  Aligned_cols=258  Identities=17%  Similarity=0.158  Sum_probs=206.5

Q ss_pred             CCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCCC---------CCCChHHHHHHHHcC-CCC
Q 005221          138 SPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGC---------NYGPPYEWQVYNTLG-GSH  207 (708)
Q Consensus       138 ~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~~---------~~~~~~Ei~il~~L~-h~~  207 (708)
                      .++|++.+.||+|+||.||+|++..          +++.||||++.......         ...+.+|+.+++++. |+|
T Consensus        16 ~~~y~~~~~lg~G~~g~V~~~~~~~----------~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~   85 (298)
T 1phk_A           16 YENYEPKEILGRGVSSVVRRCIHKP----------TCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPN   85 (298)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETT----------TTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTT
T ss_pred             hhccceeeeecCCCceEEEEEEEcC----------cCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence            4589999999999999999999977          78999999997653211         124568999999997 666


Q ss_pred             CccEEEEEeeeCCEEEEEEecC-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCC
Q 005221          208 GVPRVHFKGRQGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTP  286 (708)
Q Consensus       208 ~v~~~~~~~~~~~~~~lvme~~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~  286 (708)
                      + +.+..++..+..+++|||++ +++|.+++.... .+++..++.++.||+.||.|||++||+||||||+|||++.++  
T Consensus        86 i-~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~--  161 (298)
T 1phk_A           86 I-IQLKDTYETNTFFFLVFDLMKKGELFDYLTEKV-TLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDM--  161 (298)
T ss_dssp             B-CCEEEEEECSSEEEEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTC--
T ss_pred             E-eeeeeeeccCCeEEEEEeccCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEcCCC--
Confidence            4 45555567888999999999 789999998754 699999999999999999999999999999999999998877  


Q ss_pred             CCCcEEEeccCccccccCCCCCccccccCCCceeeccccccchhhhc------CCCCCchhhHHHHHHHHHHHHhCCCCC
Q 005221          287 DEKKLFLVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHL------GRTGSRRDDLESLAYTLIFLLRGRLPW  360 (708)
Q Consensus       287 ~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~------~~~~s~~~DIwSlGviL~eLltG~~Pf  360 (708)
                         .+||+|||++........         ....+||+.|+|||++.      ...++.++|||||||+||+|++|+.||
T Consensus       162 ---~~kl~dfg~~~~~~~~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~  229 (298)
T 1phk_A          162 ---NIKLTDFGFSCQLDPGEK---------LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF  229 (298)
T ss_dssp             ---CEEECCCTTCEECCTTCC---------BCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSS
T ss_pred             ---cEEEecccchhhcCCCcc---------cccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCC
Confidence               599999999987654322         12356999999999985      456889999999999999999999999


Q ss_pred             CCCCCCCchhhhhhhccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhHHH
Q 005221          361 QGYQGENKGFLVCKKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKLIY  440 (708)
Q Consensus       361 ~~~~~~~~~~~i~~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~~f  440 (708)
                      .+.+.......+...........+ ..+                     ...+.+||.+||..||++|||+.|+++||||
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~---------------------~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~  287 (298)
T 1phk_A          230 WHRKQMLMLRMIMSGNYQFGSPEW-DDY---------------------SDTVKDLVSRFLVVQPQKRYTAEEALAHPFF  287 (298)
T ss_dssp             CCSSHHHHHHHHHHTCCCCCTTTG-GGS---------------------CHHHHHHHHHHCCSSGGGSCCHHHHTTSGGG
T ss_pred             cCccHHHHHHHHhcCCcccCcccc-ccc---------------------CHHHHHHHHHHccCCcccCCCHHHHHhChHh
Confidence            875543333333332222111100 001                     2478999999999999999999999999998


Q ss_pred             Hhc
Q 005221          441 QVG  443 (708)
Q Consensus       441 ~~~  443 (708)
                      +..
T Consensus       288 ~~~  290 (298)
T 1phk_A          288 QQY  290 (298)
T ss_dssp             CTT
T ss_pred             hhc
Confidence            754


No 146
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00  E-value=6.7e-42  Score=366.33  Aligned_cols=270  Identities=18%  Similarity=0.196  Sum_probs=201.5

Q ss_pred             CCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCC-CCCCCChHHHHHHHHcCCCCCccEEEEEee
Q 005221          139 PMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSK-GCNYGPPYEWQVYNTLGGSHGVPRVHFKGR  217 (708)
Q Consensus       139 ~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~-~~~~~~~~Ei~il~~L~h~~~v~~~~~~~~  217 (708)
                      ++|++++.||+|+||.||+|++...       +..+..||||++..... .....+.+|+.+|+.|+|+|++..+.. +.
T Consensus        49 ~~y~i~~~lG~G~~g~V~~~~~~~~-------~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~-~~  120 (325)
T 3kul_A           49 SRIHIEKIIGSGDSGEVCYGRLRVP-------GQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGV-VT  120 (325)
T ss_dssp             GGEEEEEEEEETTTEEEEEEEECCT-------TSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEE-EC
T ss_pred             hHeEEeeEEEeCCCcEEEEEEEecC-------CCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEE-EE
Confidence            4799999999999999999998651       22456799999976422 223357789999999999886665555 46


Q ss_pred             eCCEEEEEEecC-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcEEEecc
Q 005221          218 QGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDL  296 (708)
Q Consensus       218 ~~~~~~lvme~~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~vkL~DF  296 (708)
                      .++.++|||||+ +++|.+++......+++..++.|+.||+.||.|||++||+||||||+||||+.++     .+||+||
T Consensus       121 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~-----~~kl~Df  195 (325)
T 3kul_A          121 RGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNL-----VCKVSDF  195 (325)
T ss_dssp             GGGCCEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTC-----CEEECCC
T ss_pred             eCCccEEEeeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEECCCC-----CEEECCC
Confidence            777899999999 8899999987766899999999999999999999999999999999999998877     5999999


Q ss_pred             CccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCCchhhhhhh
Q 005221          297 GLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLR-GRLPWQGYQGENKGFLVCKK  375 (708)
Q Consensus       297 Gla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLlt-G~~Pf~~~~~~~~~~~i~~~  375 (708)
                      |+++...........     .....+|+.|+|||++.+..++.++|||||||+||+|++ |..||.+....+....+...
T Consensus       196 g~a~~~~~~~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~  270 (325)
T 3kul_A          196 GLSRVLEDDPDAAYT-----TTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEG  270 (325)
T ss_dssp             SSCEECC----CCEE-----CC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHTT
T ss_pred             CcccccccCccceee-----ccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcC
Confidence            999877654322111     122347889999999999999999999999999999999 99999886655444333333


Q ss_pred             ccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCc
Q 005221          376 KMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPI  430 (708)
Q Consensus       376 ~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps  430 (708)
                      ....    .+..+|..+.+++..|+..++.+||++.++++.|+.++......|++
T Consensus       271 ~~~~----~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~~~~~~~  321 (325)
T 3kul_A          271 YRLP----APMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSPESLRAT  321 (325)
T ss_dssp             CCCC----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSCC-----
T ss_pred             CCCC----CCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCccccccc
Confidence            2211    23346666666666666666666666666666666665554444443


No 147
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00  E-value=1.3e-41  Score=353.53  Aligned_cols=261  Identities=22%  Similarity=0.259  Sum_probs=206.8

Q ss_pred             CCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCC-CCCCCCChHHHHHHHHcCCCCCccEEEEEee
Q 005221          139 PMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSS-KGCNYGPPYEWQVYNTLGGSHGVPRVHFKGR  217 (708)
Q Consensus       139 ~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~-~~~~~~~~~Ei~il~~L~h~~~v~~~~~~~~  217 (708)
                      ++|++++.||+|+||.||+|++..          +++.||||++.... ......+.+|+.+++.++|+|++..+. +..
T Consensus         7 ~~y~~~~~lg~G~~g~V~~~~~~~----------~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~-~~~   75 (276)
T 2yex_A            7 EDWDLVQTLGEGAYGEVQLAVNRV----------TEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-HRR   75 (276)
T ss_dssp             HHEEEEEEEEECSSSEEEEEEETT----------TCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEE-EEE
T ss_pred             cceEEEEEeecCCCcEEEEEEECC----------CCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeee-EEE
Confidence            469999999999999999999977          78999999987543 222345778999999999988666554 557


Q ss_pred             eCCEEEEEEecC-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcEEEecc
Q 005221          218 QGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDL  296 (708)
Q Consensus       218 ~~~~~~lvme~~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~vkL~DF  296 (708)
                      .++..++|||++ +++|.+++.... .+++..++.++.||+.||.|||++||+||||||+|||++.++     .+||+||
T Consensus        76 ~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~-----~~kl~df  149 (276)
T 2yex_A           76 EGNIQYLFLEYCSGGELFDRIEPDI-GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERD-----NLKISDF  149 (276)
T ss_dssp             ETTEEEEEEECCTTEEGGGGSBTTT-BCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTC-----CEEECCC
T ss_pred             cCCEEEEEEEecCCCcHHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCChHHEEEccCC-----CEEEeeC
Confidence            788999999999 789999887653 699999999999999999999999999999999999998877     5999999


Q ss_pred             CccccccCCCCCccccccCCCceeeccccccchhhhcCCCC-CchhhHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhh
Q 005221          297 GLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTG-SRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCKK  375 (708)
Q Consensus       297 Gla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~-s~~~DIwSlGviL~eLltG~~Pf~~~~~~~~~~~i~~~  375 (708)
                      |++.........      ......+||+.|+|||++.+..+ +.++|||||||++|+|++|+.||...............
T Consensus       150 g~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~  223 (276)
T 2yex_A          150 GLATVFRYNNRE------RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKE  223 (276)
T ss_dssp             TTCEECEETTEE------CCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHT
T ss_pred             CCccccCCCcch------hcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhh
Confidence            999875433211      11224569999999999988775 78999999999999999999999876544332222111


Q ss_pred             ccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhHHHHhccc
Q 005221          376 KMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKLIYQVGHK  445 (708)
Q Consensus       376 ~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~~f~~~~~  445 (708)
                      .....+.  ...+                     ...+.+||.+||..||.+|||+.|+++|+||+...+
T Consensus       224 ~~~~~~~--~~~~---------------------~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~  270 (276)
T 2yex_A          224 KKTYLNP--WKKI---------------------DSAPLALLHKILVENPSARITIPDIKKDRWYNKPLK  270 (276)
T ss_dssp             TCTTSTT--GGGS---------------------CHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTCCCC
T ss_pred             cccccCc--hhhc---------------------CHHHHHHHHHHCCCCchhCCCHHHHhcCccccChhh
Confidence            1100000  0001                     247889999999999999999999999999876543


No 148
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00  E-value=2.7e-41  Score=354.22  Aligned_cols=259  Identities=22%  Similarity=0.218  Sum_probs=207.4

Q ss_pred             CCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCC--CCCCCChHHHHHHHHcCCCCCccEEEEEe
Q 005221          139 PMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSK--GCNYGPPYEWQVYNTLGGSHGVPRVHFKG  216 (708)
Q Consensus       139 ~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~--~~~~~~~~Ei~il~~L~h~~~v~~~~~~~  216 (708)
                      ++|++++.||+|+||.||+|++..          +++.||||++.....  .....+.+|+.++++|+|+|++..+.. .
T Consensus        22 ~~y~i~~~lg~G~~g~V~~~~~~~----------~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~-~   90 (287)
T 2wei_A           22 ERYNIVCMLGKGSFGEVLKCKDRI----------TQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI-L   90 (287)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETT----------TCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEE-E
T ss_pred             hcceeeEEEcCCCCEEEEEEEEcC----------CCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEE-E
Confidence            479999999999999999999977          789999999876532  223356789999999999886665554 4


Q ss_pred             eeCCEEEEEEecC-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcEEEec
Q 005221          217 RQGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVD  295 (708)
Q Consensus       217 ~~~~~~~lvme~~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~vkL~D  295 (708)
                      ...+.+++|||++ +++|.+.+.... .+++..++.++.||+.||.|||++||+||||||+|||++..+  ....+||+|
T Consensus        91 ~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIlv~~~~--~~~~~kL~D  167 (287)
T 2wei_A           91 EDSSSFYIVGELYTGGELFDEIIKRK-RFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKE--KDCDIKIID  167 (287)
T ss_dssp             ECSSEEEEEECCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSS--TTCCEEECS
T ss_pred             eCCCeEEEEEEccCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCChhhEEEecCC--CcccEEEec
Confidence            6778899999999 899999887654 699999999999999999999999999999999999998654  234699999


Q ss_pred             cCccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhh
Q 005221          296 LGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCKK  375 (708)
Q Consensus       296 FGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLltG~~Pf~~~~~~~~~~~i~~~  375 (708)
                      ||++.........         ....||+.|+|||++.+. ++.++|||||||++|+|++|..||.+.+..+....+...
T Consensus       168 fg~~~~~~~~~~~---------~~~~~~~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~  237 (287)
T 2wei_A          168 FGLSTCFQQNTKM---------KDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETG  237 (287)
T ss_dssp             TTGGGTBCCCSSC---------SCHHHHHTTCCHHHHTTC-CCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC
T ss_pred             cCcceeecCCCcc---------ccccCcccccChHHhcCC-CCCchhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcC
Confidence            9999876543221         234599999999998765 899999999999999999999999876544333333332


Q ss_pred             ccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhHHHHhc
Q 005221          376 KMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKLIYQVG  443 (708)
Q Consensus       376 ~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~~f~~~  443 (708)
                      ........+ ..+                     ...+.+||.+||..||++|||+.|+|+||||+..
T Consensus       238 ~~~~~~~~~-~~~---------------------~~~~~~li~~~l~~dp~~Rps~~ell~hp~~~~~  283 (287)
T 2wei_A          238 KYAFDLPQW-RTI---------------------SDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKY  283 (287)
T ss_dssp             CCCCCSGGG-TTS---------------------CHHHHHHHHHHTCSSGGGSCCHHHHHHSHHHHHH
T ss_pred             CCCCCchhh-hhc---------------------CHHHHHHHHHHcccChhhCcCHHHHhcCHHHhcc
Confidence            221111100 011                     1478999999999999999999999999999764


No 149
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00  E-value=2.8e-41  Score=358.17  Aligned_cols=259  Identities=19%  Similarity=0.195  Sum_probs=204.7

Q ss_pred             CCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCCCCCCChHHHHHHHHcCCCCCccEEEEEee
Q 005221          138 SPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNTLGGSHGVPRVHFKGR  217 (708)
Q Consensus       138 ~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~~~~~~~~Ei~il~~L~h~~~v~~~~~~~~  217 (708)
                      .++|++++.||+|+||.||+|++..          +++.||||++.....  ...+.+|+.+++.|+|+|++..+..+ .
T Consensus        28 ~~~y~~~~~lg~G~~g~Vy~~~~~~----------~~~~vaiK~~~~~~~--~~~~~~e~~~l~~l~h~~i~~~~~~~-~   94 (314)
T 3com_A           28 EEVFDVLEKLGEGSYGSVYKAIHKE----------TGQIVAIKQVPVESD--LQEIIKEISIMQQCDSPHVVKYYGSY-F   94 (314)
T ss_dssp             --CEEEEEECC----CEEEEEEETT----------TCCEEEEEEEETTSC--CHHHHHHHHHHHTCCCTTBCCEEEEE-E
T ss_pred             hhhhhhheeeccCCCeEEEEEEECC----------CCCEEEEEecCchHH--HHHHHHHHHHHHhCCCCCCccEEEEE-E
Confidence            4579999999999999999999977          789999999976532  34578899999999998866655554 6


Q ss_pred             eCCEEEEEEecC-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcEEEecc
Q 005221          218 QGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDL  296 (708)
Q Consensus       218 ~~~~~~lvme~~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~vkL~DF  296 (708)
                      ..+.+++|||++ +++|.+++......+++..++.++.||+.||.|||++||+||||||+|||++.++     .+||+||
T Consensus        95 ~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~-----~~kl~df  169 (314)
T 3com_A           95 KNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEG-----HAKLADF  169 (314)
T ss_dssp             ETTEEEEEEECCTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTC-----CEEECCC
T ss_pred             eCCEEEEEeecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCcCHHHEEECCCC-----CEEEeec
Confidence            678899999999 7799999986666799999999999999999999999999999999999998877     5999999


Q ss_pred             CccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhhc
Q 005221          297 GLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCKKK  376 (708)
Q Consensus       297 Gla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLltG~~Pf~~~~~~~~~~~i~~~~  376 (708)
                      |++.........        .....||+.|+|||++.+..++.++|||||||++|+|++|+.||...........+....
T Consensus       170 g~~~~~~~~~~~--------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~  241 (314)
T 3com_A          170 GVAGQLTDTMAK--------RNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNP  241 (314)
T ss_dssp             TTCEECBTTBSC--------BCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSC
T ss_pred             ccchhhhhhccc--------cCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCC
Confidence            999876543221        123569999999999999999999999999999999999999998754332222221111


Q ss_pred             cCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhHHHHhccc
Q 005221          377 MATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKLIYQVGHK  445 (708)
Q Consensus       377 ~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~~f~~~~~  445 (708)
                      .  .....+..+                     ...+.+||.+||..||.+|||+.++++||||.....
T Consensus       242 ~--~~~~~~~~~---------------------~~~l~~li~~~l~~dp~~Rpt~~~ll~~~~~~~~~~  287 (314)
T 3com_A          242 P--PTFRKPELW---------------------SDNFTDFVKQCLVKSPEQRATATQLLQHPFVRSAKG  287 (314)
T ss_dssp             C--CCCSSGGGS---------------------CHHHHHHHHHHTCSCTTTSCCHHHHTTSHHHHTCCC
T ss_pred             C--cccCCcccC---------------------CHHHHHHHHHHccCChhhCcCHHHHHhCHHHhcCCc
Confidence            0  000000111                     247889999999999999999999999999986543


No 150
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00  E-value=8.3e-42  Score=369.19  Aligned_cols=262  Identities=16%  Similarity=0.187  Sum_probs=203.1

Q ss_pred             CCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCC-CCCCChHHHHHHHHc-CCCCCccEEEEE
Q 005221          138 SPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKG-CNYGPPYEWQVYNTL-GGSHGVPRVHFK  215 (708)
Q Consensus       138 ~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~-~~~~~~~Ei~il~~L-~h~~~v~~~~~~  215 (708)
                      .++|++++.||+|+||.||+|++...     ....+++.||||++...... ....+.+|+++|.+| +|+|+|..+..+
T Consensus        21 ~~~y~~~~~lG~G~~g~Vy~~~~~~~-----~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~   95 (359)
T 3vhe_A           21 RDRLKLGKPLGRGAFGQVIEADAFGI-----DKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGAC   95 (359)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESS-----SSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             ccceeeceeecCCCCceEEEEEeccc-----cccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeeeee
Confidence            45899999999999999999996541     11226789999999764321 123478899999999 566766666666


Q ss_pred             eeeCCEEEEEEecC-CCCHHHHHhccCC----------------------------------------------------
Q 005221          216 GRQGDYYVMVMDML-GPSLWDVWNNNSH----------------------------------------------------  242 (708)
Q Consensus       216 ~~~~~~~~lvme~~-ggsL~~~l~~~~~----------------------------------------------------  242 (708)
                      ...+..+++||||+ +|+|.+++.....                                                    
T Consensus        96 ~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  175 (359)
T 3vhe_A           96 TKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSD  175 (359)
T ss_dssp             CSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC----------------------------------------------
T ss_pred             ecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccch
Confidence            66667799999999 8899999976532                                                    


Q ss_pred             -------------CCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcEEEeccCccccccCCCCCc
Q 005221          243 -------------TMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGM  309 (708)
Q Consensus       243 -------------~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~vkL~DFGla~~~~~~~~~~  309 (708)
                                   .+++..++.++.||+.||.|||++|||||||||+||||+.++     .+||+|||+++.........
T Consensus       176 ~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~ivH~Dikp~NIll~~~~-----~~kl~Dfg~a~~~~~~~~~~  250 (359)
T 3vhe_A          176 VEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKN-----VVKICDFGLARDIYKDPDYV  250 (359)
T ss_dssp             --------CTTTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGG-----CEEECCCGGGSCTTSCTTCE
T ss_pred             hhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCC-----cEEEEeccceeeecccccch
Confidence                         289999999999999999999999999999999999998777     59999999998765433211


Q ss_pred             cccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCCchhhhhhhccCCCCCCccCCC
Q 005221          310 HVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLR-GRLPWQGYQGENKGFLVCKKKMATSPDGLCCFC  388 (708)
Q Consensus       310 ~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLlt-G~~Pf~~~~~~~~~~~i~~~~~~~~p~~l~~~~  388 (708)
                            ......||+.|+|||++.+..++.++|||||||+||+|++ |++||.+................   ...+..+
T Consensus       251 ------~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~  321 (359)
T 3vhe_A          251 ------RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTR---MRAPDYT  321 (359)
T ss_dssp             ------EC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHTCC---CCCCTTC
T ss_pred             ------hccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHHHHcCCC---CCCCCCC
Confidence                  1224569999999999999999999999999999999998 99999886544433222222111   1111122


Q ss_pred             ChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhHH
Q 005221          389 PAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKLI  439 (708)
Q Consensus       389 p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~~  439 (708)
                      +                     ..+.+|+.+||..||++|||+.|+++|+-
T Consensus       322 ~---------------------~~l~~li~~~l~~dP~~Rps~~ell~~L~  351 (359)
T 3vhe_A          322 T---------------------PEMYQTMLDCWHGEPSQRPTFSELVEHLG  351 (359)
T ss_dssp             C---------------------HHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             C---------------------HHHHHHHHHHccCChhhCCCHHHHHHHHH
Confidence            2                     46788899999999999999999998863


No 151
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00  E-value=5.4e-42  Score=370.67  Aligned_cols=276  Identities=16%  Similarity=0.197  Sum_probs=207.9

Q ss_pred             CCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCC--CCCCChHHHHHHHHcCCCCCccEEEEEe
Q 005221          139 PMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKG--CNYGPPYEWQVYNTLGGSHGVPRVHFKG  216 (708)
Q Consensus       139 ~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~--~~~~~~~Ei~il~~L~h~~~v~~~~~~~  216 (708)
                      ++|.+.+.||+|+||.||+|++..          +++.||||++......  ....+.+|+.+++.|+|+|++..+..+.
T Consensus        24 ~~y~~~~~lg~G~~g~V~~~~~~~----------~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~   93 (353)
T 3coi_A           24 KTYVSPTHVGSGAYGSVCSAIDKR----------SGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFT   93 (353)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETT----------TTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEEC
T ss_pred             ceEEEeeeEecCCCeEEEEEEECC----------CCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEe
Confidence            479999999999999999999977          7899999998764321  1234678999999999999887777665


Q ss_pred             eeCC-----EEEEEEecCCCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcE
Q 005221          217 RQGD-----YYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKL  291 (708)
Q Consensus       217 ~~~~-----~~~lvme~~ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~v  291 (708)
                      ..+.     .+++|||+++++|.+++..   .+++..++.++.||+.||.|||++||+||||||+|||++.++     .+
T Consensus        94 ~~~~~~~~~~~~lv~e~~~~~l~~~~~~---~~~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~NIl~~~~~-----~~  165 (353)
T 3coi_A           94 PASSLRNFYDFYLVMPFMQTDLQKIMGL---KFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDC-----EL  165 (353)
T ss_dssp             SCSSGGGCCCCEEEEECCSEEGGGTTTS---CCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTC-----CE
T ss_pred             cccccccceeEEEEeccccCCHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEeECCCC-----cE
Confidence            4332     4699999999899887743   599999999999999999999999999999999999999877     59


Q ss_pred             EEeccCccccccCCCCCccccccCCCceeeccccccchhhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCchh
Q 005221          292 FLVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLG-RTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGF  370 (708)
Q Consensus       292 kL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~-~~~s~~~DIwSlGviL~eLltG~~Pf~~~~~~~~~~  370 (708)
                      ||+|||+++......           ...+||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+..+...
T Consensus       166 kl~Dfg~~~~~~~~~-----------~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~  234 (353)
T 3coi_A          166 KILDFGLARHADAEM-----------TGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLT  234 (353)
T ss_dssp             EECSTTCTTC-------------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHH
T ss_pred             EEeecccccCCCCCc-----------cccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence            999999998654321           23569999999999987 678999999999999999999999999866544444


Q ss_pred             hhhhhccCCCCCCccCCCChHHHHHHHHHHcCC---CCC-cc-cHHHHHHHHHhhhCCCCCCCCcchHHHHhHHHHhc
Q 005221          371 LVCKKKMATSPDGLCCFCPAPFRQFVEYVVNLK---FDE-EP-NYAKYISLFDGIVGPNPDIRPISTEGAQKLIYQVG  443 (708)
Q Consensus       371 ~i~~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~---~~~-rP-~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~~f~~~  443 (708)
                      .+.+....+..+.+..........++.......   +.. .+ -...+.+||.+||..||++|||+.|+++||||...
T Consensus       235 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~~  312 (353)
T 3coi_A          235 QILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPF  312 (353)
T ss_dssp             HHHHHHCBCCHHHHTTCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTT
T ss_pred             HHHHHhCCCCHHHHHHHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcCcchhhc
Confidence            444332222221111112222222222111110   000 01 13579999999999999999999999999999753


No 152
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00  E-value=4e-42  Score=374.52  Aligned_cols=266  Identities=17%  Similarity=0.203  Sum_probs=205.9

Q ss_pred             CCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCC-CCCCCCChHHHHHHHHcCCCCCccEEEEEe
Q 005221          138 SPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSS-KGCNYGPPYEWQVYNTLGGSHGVPRVHFKG  216 (708)
Q Consensus       138 ~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~-~~~~~~~~~Ei~il~~L~h~~~v~~~~~~~  216 (708)
                      .++|++++.||+|+||.||+|++...     ....+++.||||++.... ......+.+|+.+++.|+|+|+|..+..+ 
T Consensus        70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~-----~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~-  143 (367)
T 3l9p_A           70 RKNITLIRGLGHGAFGEVYEGQVSGM-----PNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVS-  143 (367)
T ss_dssp             GGGEEEEEECCCCSSSCEEEEEECC----------CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-
T ss_pred             HhHeEEeeEeeeCCCEEEEEEEEccC-----CCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEE-
Confidence            35799999999999999999996431     011267899999986542 22223467899999999999877666655 


Q ss_pred             eeCCEEEEEEecC-CCCHHHHHhccC------CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCC
Q 005221          217 RQGDYYVMVMDML-GPSLWDVWNNNS------HTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEK  289 (708)
Q Consensus       217 ~~~~~~~lvme~~-ggsL~~~l~~~~------~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~  289 (708)
                      ......+|||||+ |++|.+++....      ..+++..++.++.||+.||.|||++|||||||||+||||+.++  ...
T Consensus       144 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~--~~~  221 (367)
T 3l9p_A          144 LQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPG--PGR  221 (367)
T ss_dssp             CSSSSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSS--TTC
T ss_pred             ecCCCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEEecCC--CCc
Confidence            5666789999999 889999997643      3599999999999999999999999999999999999998665  233


Q ss_pred             cEEEeccCccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCCc
Q 005221          290 KLFLVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLR-GRLPWQGYQGENK  368 (708)
Q Consensus       290 ~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLlt-G~~Pf~~~~~~~~  368 (708)
                      .+||+|||+|+........      ......+||+.|+|||++.+..++.++|||||||+||+|++ |.+||.+......
T Consensus       222 ~~kL~DFG~a~~~~~~~~~------~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~~  295 (367)
T 3l9p_A          222 VAKIGDFGMARDIYRAGYY------RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEV  295 (367)
T ss_dssp             CEEECCCHHHHHHHHHSSC------TTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHH
T ss_pred             eEEECCCcccccccccccc------ccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHH
Confidence            6999999999865332211      11224568999999999999999999999999999999998 9999987654433


Q ss_pred             hhhhhhhccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhHHHHh
Q 005221          369 GFLVCKKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKLIYQV  442 (708)
Q Consensus       369 ~~~i~~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~~f~~  442 (708)
                      ...+........    +..+|                     ..+.+||.+||..||++||++.++++++++..
T Consensus       296 ~~~i~~~~~~~~----~~~~~---------------------~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~  344 (367)
T 3l9p_A          296 LEFVTSGGRMDP----PKNCP---------------------GPVYRIMTQCWQHQPEDRPNFAIILERIEYCT  344 (367)
T ss_dssp             HHHHHTTCCCCC----CTTCC---------------------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHcCCCCCC----CccCC---------------------HHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHh
Confidence            333332221111    11222                     46789999999999999999999999998654


No 153
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00  E-value=1.8e-41  Score=354.97  Aligned_cols=258  Identities=21%  Similarity=0.223  Sum_probs=187.1

Q ss_pred             CCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCCC-CCC-ChHHHHHHHHcCCCCCccEEEEEe
Q 005221          139 PMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGC-NYG-PPYEWQVYNTLGGSHGVPRVHFKG  216 (708)
Q Consensus       139 ~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~~-~~~-~~~Ei~il~~L~h~~~v~~~~~~~  216 (708)
                      ++|++++.||+|+||.||+|++..          +++.||+|++....... ... +..+...++.++|+|++..+.. .
T Consensus         7 ~~y~~~~~lg~G~~g~V~~~~~~~----------~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~-~   75 (290)
T 3fme_A            7 DDLEPIMELGRGAYGVVEKMRHVP----------SGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGA-L   75 (290)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETT----------TTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEE-E
T ss_pred             HhhhhHHhcCCCCCeEEEEEEecC----------CCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeee-e
Confidence            579999999999999999999977          78999999987542211 111 2233444667788776655554 4


Q ss_pred             eeCCEEEEEEecCCCCHHHHHhc---cCCCCCHHHHHHHHHHHHHHHHHHHhC-CceecCCCCCcEEeCCCCCCCCCcEE
Q 005221          217 RQGDYYVMVMDMLGPSLWDVWNN---NSHTMSIEMVACIAIEAISILEKMHSK-GYVHGDVKPENFLLGPPGTPDEKKLF  292 (708)
Q Consensus       217 ~~~~~~~lvme~~ggsL~~~l~~---~~~~l~~~~~~~i~~qil~aL~yLH~~-gIvHrDIKP~NILl~~~g~~~~~~vk  292 (708)
                      ..++.+++||||++++|.+++..   .+..+++..++.++.||+.||.|||++ ||+||||||+|||++.++     .+|
T Consensus        76 ~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dlkp~Nil~~~~~-----~~k  150 (290)
T 3fme_A           76 FREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALG-----QVK  150 (290)
T ss_dssp             ECSSSEEEEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSCCCCCCCSGGGCEECTTC-----CEE
T ss_pred             eccCCEEEEEehhccchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCC-----CEE
Confidence            56778999999998899887754   455799999999999999999999998 999999999999998877     599


Q ss_pred             EeccCccccccCCCCCccccccCCCceeeccccccchhhh----cCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCc
Q 005221          293 LVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAH----LGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENK  368 (708)
Q Consensus       293 L~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~----~~~~~s~~~DIwSlGviL~eLltG~~Pf~~~~~~~~  368 (708)
                      |+|||+++........         ....||+.|+|||++    .+..++.++|||||||++|+|++|+.||........
T Consensus       151 l~Dfg~~~~~~~~~~~---------~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~  221 (290)
T 3fme_A          151 MCDFGISGYLVDDVAK---------DIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQ  221 (290)
T ss_dssp             BCCC------------------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHH
T ss_pred             EeecCCcccccccccc---------cccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHH
Confidence            9999999876543221         234599999999996    566789999999999999999999999986432211


Q ss_pred             hhhhhhhccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhHHHHhcc
Q 005221          369 GFLVCKKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKLIYQVGH  444 (708)
Q Consensus       369 ~~~i~~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~~f~~~~  444 (708)
                      ..  ........+......+                     ...+.+||.+||..||++|||+.|+++||||+...
T Consensus       222 ~~--~~~~~~~~~~~~~~~~---------------------~~~~~~li~~~l~~~p~~Rpt~~e~l~hp~f~~~~  274 (290)
T 3fme_A          222 QL--KQVVEEPSPQLPADKF---------------------SAEFVDFTSQCLKKNSKERPTYPELMQHPFFTLHE  274 (290)
T ss_dssp             HH--HHHHHSCCCCCCTTTS---------------------CHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHHH
T ss_pred             HH--HHHhccCCCCcccccC---------------------CHHHHHHHHHHhhcChhhCcCHHHHHhCcccccCc
Confidence            11  1111111111101111                     24789999999999999999999999999998654


No 154
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00  E-value=3e-41  Score=361.36  Aligned_cols=259  Identities=17%  Similarity=0.222  Sum_probs=196.5

Q ss_pred             CCCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCC-CCCCCCChHHHHHHHHcCCCCCccEEEEE
Q 005221          137 GSPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSS-KGCNYGPPYEWQVYNTLGGSHGVPRVHFK  215 (708)
Q Consensus       137 ~~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~-~~~~~~~~~Ei~il~~L~h~~~v~~~~~~  215 (708)
                      ...+|++++.||+|+||.||+|++.....      ....+||+|.+.... ......+.+|+.++++++|+|++..+..+
T Consensus        13 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~------~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~   86 (327)
T 3poz_A           13 KETEFKKIKVLGSGAFGTVYKGLWIPEGE------KVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGIC   86 (327)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEECC----------CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEE
T ss_pred             CHHHcccceEEeeCCCeEEEEEEEcCCCc------eEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEE
Confidence            34579999999999999999999866100      023456888776432 22334578899999999999977777666


Q ss_pred             eeeCCEEEEEEecC-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcEEEe
Q 005221          216 GRQGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLV  294 (708)
Q Consensus       216 ~~~~~~~~lvme~~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~vkL~  294 (708)
                      . .+. .+++|+++ +|+|.+++......+++..++.++.||+.||.|||++|||||||||+||||+.++     .+||+
T Consensus        87 ~-~~~-~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIll~~~~-----~~kl~  159 (327)
T 3poz_A           87 L-TST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQ-----HVKIT  159 (327)
T ss_dssp             E-SSS-EEEEEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETT-----EEEEC
T ss_pred             e-cCC-eEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCChheEEECCCC-----CEEEc
Confidence            4 444 45666666 9999999988777899999999999999999999999999999999999998877     59999


Q ss_pred             ccCccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCCchhhhh
Q 005221          295 DLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLR-GRLPWQGYQGENKGFLVC  373 (708)
Q Consensus       295 DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLlt-G~~Pf~~~~~~~~~~~i~  373 (708)
                      |||+|+..........      .....||+.|+|||++.+..++.++|||||||+||+|++ |+.||.+.........+.
T Consensus       160 Dfg~a~~~~~~~~~~~------~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~  233 (327)
T 3poz_A          160 DFGLAKLLGAEEKEYH------AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE  233 (327)
T ss_dssp             CTTHHHHHTTTCC-------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHH
T ss_pred             cCcceeEccCCccccc------ccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHHHHHHHH
Confidence            9999987755432211      123457899999999999999999999999999999999 999999866554433333


Q ss_pred             hhccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhHH
Q 005221          374 KKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKLI  439 (708)
Q Consensus       374 ~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~~  439 (708)
                      .......+    ..++                     ..+.+|+.+||..||.+||++.++++++-
T Consensus       234 ~~~~~~~~----~~~~---------------------~~~~~li~~~l~~~p~~Rps~~ell~~l~  274 (327)
T 3poz_A          234 KGERLPQP----PICT---------------------IDVYMIMVKCWMIDADSRPKFRELIIEFS  274 (327)
T ss_dssp             TTCCCCCC----TTBC---------------------HHHHHHHHHHTCSCGGGSCCHHHHHHHHH
T ss_pred             cCCCCCCC----ccCC---------------------HHHHHHHHHHcCCChhhCCCHHHHHHHHH
Confidence            32221111    1122                     46788889999999999999999888854


No 155
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00  E-value=1.9e-41  Score=351.76  Aligned_cols=252  Identities=15%  Similarity=0.161  Sum_probs=201.9

Q ss_pred             CCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCCCCCCChHHHHHHHHcCCCCCccEEEEEee
Q 005221          138 SPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNTLGGSHGVPRVHFKGR  217 (708)
Q Consensus       138 ~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~~~~~~~~Ei~il~~L~h~~~v~~~~~~~~  217 (708)
                      .++|++++.||+|+||.||+|++..           +..||+|++...... ...+.+|+.++++|+|+|++..+.. +.
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~~-----------~~~vavK~~~~~~~~-~~~~~~E~~~l~~l~h~~i~~~~~~-~~   75 (269)
T 4hcu_A            9 PSELTFVQEIGSGQFGLVHLGYWLN-----------KDKVAIKTIREGAMS-EEDFIEEAEVMMKLSHPKLVQLYGV-CL   75 (269)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETT-----------TEEEEEEEECTTSBC-HHHHHHHHHHHHTCCCTTBCCEEEE-EC
T ss_pred             hhhceeeheecCCCccEEEEEEecC-----------CCeEEEEEecccccC-HHHHHHHHHHHHhCCCCCEeeEEEE-Ee
Confidence            3579999999999999999999854           567999999765322 3457889999999999886665555 46


Q ss_pred             eCCEEEEEEecC-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcEEEecc
Q 005221          218 QGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDL  296 (708)
Q Consensus       218 ~~~~~~lvme~~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~vkL~DF  296 (708)
                      +...+++||||+ +++|.+++......+++..++.++.|++.||.|||++||+||||||+|||++.++     .+||+||
T Consensus        76 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~-----~~kl~Df  150 (269)
T 4hcu_A           76 EQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQ-----VIKVSDF  150 (269)
T ss_dssp             SSSSEEEEEECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECGGG-----CEEECCT
T ss_pred             cCCceEEEEEeCCCCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHHhCCeecCCcchheEEEcCCC-----CEEeccc
Confidence            667799999999 8899999987766799999999999999999999999999999999999998776     5999999


Q ss_pred             CccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCCchhhhhhh
Q 005221          297 GLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLR-GRLPWQGYQGENKGFLVCKK  375 (708)
Q Consensus       297 Gla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLlt-G~~Pf~~~~~~~~~~~i~~~  375 (708)
                      |+++........       ......||+.|+|||++.+..++.++|||||||++|+|++ |++||.+....+....+...
T Consensus       151 g~~~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~~~~~~~~  223 (269)
T 4hcu_A          151 GMTRFVLDDQYT-------SSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTG  223 (269)
T ss_dssp             TGGGGBCCHHHH-------STTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTT
T ss_pred             cccccccccccc-------cccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhcC
Confidence            999865442111       1122447889999999999999999999999999999999 99999875543332222222


Q ss_pred             ccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhHH
Q 005221          376 KMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKLI  439 (708)
Q Consensus       376 ~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~~  439 (708)
                      .....+    ..+                     ...+.+++.+||..||++||++.++++++-
T Consensus       224 ~~~~~~----~~~---------------------~~~~~~li~~~l~~~p~~Rps~~~ll~~l~  262 (269)
T 4hcu_A          224 FRLYKP----RLA---------------------STHVYQIMNHCWRERPEDRPAFSRLLRQLA  262 (269)
T ss_dssp             CCCCCC----TTS---------------------CHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             ccCCCC----CcC---------------------CHHHHHHHHHHccCCcccCcCHHHHHHHHH
Confidence            111111    111                     246889999999999999999999998864


No 156
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00  E-value=1.2e-41  Score=369.66  Aligned_cols=280  Identities=20%  Similarity=0.241  Sum_probs=203.6

Q ss_pred             CCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCCCCCCChHHHHHHHHcC-----------CC
Q 005221          138 SPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNTLG-----------GS  206 (708)
Q Consensus       138 ~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~~~~~~~~Ei~il~~L~-----------h~  206 (708)
                      .++|++++.||+|+||.||+|++..          +++.||||++..... ....+.+|+.+++++.           |+
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~~----------~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~~~~~~~~~~~~~~   86 (373)
T 1q8y_A           18 DARYILVRKLGWGHFSTVWLAKDMV----------NNTHVAMKIVRGDKV-YTEAAEDEIKLLQRVNDADNTKEDSMGAN   86 (373)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETT----------TTEEEEEEEECSCHH-HHHHHHHHHHHHHHHHHTCCSHHHHHHHT
T ss_pred             CCeEEEEEeeeecCCeEEEEEEecC----------CCcEEEEEEecCCcc-chhhhhHHHHHHHHhhcccccchhccccc
Confidence            3589999999999999999999977          789999999874321 1234678999999987           56


Q ss_pred             CCccEEEEEeeeC---CEEEEEEecCCCCHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHhC-CceecCCCCCcEEeC
Q 005221          207 HGVPRVHFKGRQG---DYYVMVMDMLGPSLWDVWNNN-SHTMSIEMVACIAIEAISILEKMHSK-GYVHGDVKPENFLLG  281 (708)
Q Consensus       207 ~~v~~~~~~~~~~---~~~~lvme~~ggsL~~~l~~~-~~~l~~~~~~~i~~qil~aL~yLH~~-gIvHrDIKP~NILl~  281 (708)
                      |++..+..+...+   .+++||||+++++|.+++... ...+++..++.++.||+.||.|||++ |||||||||+||||+
T Consensus        87 ~i~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~ivH~Dikp~NIll~  166 (373)
T 1q8y_A           87 HILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLME  166 (373)
T ss_dssp             TBCCCCEEEEEEETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEE
T ss_pred             hHHHHHHHhhccCCCCceEEEEEecCCCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCCEEecCCChHHeEEe
Confidence            6666665554332   389999999999999999864 34699999999999999999999998 999999999999996


Q ss_pred             CCCC-CCCCcEEEeccCccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCC
Q 005221          282 PPGT-PDEKKLFLVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPW  360 (708)
Q Consensus       282 ~~g~-~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLltG~~Pf  360 (708)
                      ..++ .....+||+|||+++.......           ..+||+.|+|||++.+..++.++|||||||+||+|++|++||
T Consensus       167 ~~~~~~~~~~~kl~Dfg~a~~~~~~~~-----------~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf  235 (373)
T 1q8y_A          167 IVDSPENLIQIKIADLGNACWYDEHYT-----------NSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLF  235 (373)
T ss_dssp             EEETTTTEEEEEECCCTTCEETTBCCC-----------SCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC
T ss_pred             ccCCCcCcceEEEcccccccccCCCCC-----------CCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCC
Confidence            5432 1234699999999987654321           245999999999999999999999999999999999999999


Q ss_pred             CCCCCCCc------hhhhhhhccCCCCCCc--------------------cCCCChHHHHHHHHHHcCCCCCcc-cHHHH
Q 005221          361 QGYQGENK------GFLVCKKKMATSPDGL--------------------CCFCPAPFRQFVEYVVNLKFDEEP-NYAKY  413 (708)
Q Consensus       361 ~~~~~~~~------~~~i~~~~~~~~p~~l--------------------~~~~p~~~~~l~~~~~~~~~~~rP-~~~~l  413 (708)
                      .+......      ...+.... ...|..+                    .......+..++.    ....-.+ ....+
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~  310 (373)
T 1q8y_A          236 EPDEGHSYTKDDDHIAQIIELL-GELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLT----EKYKFSKDEAKEI  310 (373)
T ss_dssp             ---------CHHHHHHHHHHHH-CSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHH----HTTCCCHHHHHHH
T ss_pred             CCCcccccCChHHHHHHHHHhc-CCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhh----hcccCCcchHHHH
Confidence            87553211      11111111 1111000                    0000000111111    1111111 23578


Q ss_pred             HHHHHhhhCCCCCCCCcchHHHHhHHHHhcc
Q 005221          414 ISLFDGIVGPNPDIRPISTEGAQKLIYQVGH  444 (708)
Q Consensus       414 ~~LL~~mL~~dP~~Rps~~e~l~h~~f~~~~  444 (708)
                      .+||.+||..||++|||+.|+|+||||....
T Consensus       311 ~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~  341 (373)
T 1q8y_A          311 SDFLSPMLQLDPRKRADAGGLVNHPWLKDTL  341 (373)
T ss_dssp             HHHHGGGGCSSTTTCBCHHHHHTCGGGTTCT
T ss_pred             HHHHHHHhccCccccCCHHHHhhChhhhccc
Confidence            9999999999999999999999999998654


No 157
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00  E-value=1.2e-41  Score=358.72  Aligned_cols=261  Identities=17%  Similarity=0.188  Sum_probs=203.4

Q ss_pred             CCCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCCCCCCChHHHHHHHHcCCCCCccEEEEEe
Q 005221          137 GSPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNTLGGSHGVPRVHFKG  216 (708)
Q Consensus       137 ~~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~~~~~~~~Ei~il~~L~h~~~v~~~~~~~  216 (708)
                      ..++|++++.||+|+||.||+|++..          ++..||+|++..........+.+|+.+++.++|+|++..+..+ 
T Consensus        17 ~~~~y~i~~~lg~G~~g~V~~~~~~~----------~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-   85 (302)
T 2j7t_A           17 PNEVWEIVGELGDGAFGKVYKAKNKE----------TGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAY-   85 (302)
T ss_dssp             GGGTEEEEEEEECSTTCCEEEEEETT----------TCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEE-
T ss_pred             CccceeecceeccCCCeEEEEEEEcC----------CCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeee-
Confidence            34689999999999999999999977          7899999998766544445677899999999999877666555 


Q ss_pred             eeCCEEEEEEecC-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcEEEec
Q 005221          217 RQGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVD  295 (708)
Q Consensus       217 ~~~~~~~lvme~~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~vkL~D  295 (708)
                      ..++.+++|||++ +++|.+++......+++..++.++.||+.||.|||++||+||||||+|||++.++     .+||+|
T Consensus        86 ~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~-----~~kl~D  160 (302)
T 2j7t_A           86 YHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEG-----DIRLAD  160 (302)
T ss_dssp             ECC-CEEEEEECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTS-----CEEECC
T ss_pred             eeCCeEEEEEEeCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEECCCC-----CEEEEE
Confidence            5566889999999 8899998887666799999999999999999999999999999999999998777     599999


Q ss_pred             cCccccccCCCCCccccccCCCceeeccccccchhhhc-----CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCchh
Q 005221          296 LGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHL-----GRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGF  370 (708)
Q Consensus       296 FGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~-----~~~~s~~~DIwSlGviL~eLltG~~Pf~~~~~~~~~~  370 (708)
                      ||++.......        ......+||+.|+|||++.     +..++.++|||||||++|+|++|..||...+......
T Consensus       161 fg~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~  232 (302)
T 2j7t_A          161 FGVSAKNLKTL--------QKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLL  232 (302)
T ss_dssp             CHHHHHHHHHH--------HC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH
T ss_pred             CCCCccccccc--------cccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHH
Confidence            99986432211        0112356999999999984     6778999999999999999999999998765433222


Q ss_pred             hhhhhccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhHHHHhcc
Q 005221          371 LVCKKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKLIYQVGH  444 (708)
Q Consensus       371 ~i~~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~~f~~~~  444 (708)
                      .+......  .......+                     ...+.+||.+||..||.+|||+.++++||||....
T Consensus       233 ~~~~~~~~--~~~~~~~~---------------------~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~  283 (302)
T 2j7t_A          233 KIAKSDPP--TLLTPSKW---------------------SVEFRDFLKIALDKNPETRPSAAQLLEHPFVSSIT  283 (302)
T ss_dssp             HHHHSCCC--CCSSGGGS---------------------CHHHHHHHHHHSCSCTTTSCCHHHHTTSTTTTTCC
T ss_pred             HHhccCCc--ccCCcccc---------------------CHHHHHHHHHHcccChhhCCCHHHHhcChHHhhhc
Confidence            22221110  00001111                     14688999999999999999999999999987544


No 158
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00  E-value=2.5e-41  Score=363.20  Aligned_cols=260  Identities=20%  Similarity=0.246  Sum_probs=199.4

Q ss_pred             CCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCC-CCCCChHHHHH-HHHcCCCCCccEEEEE
Q 005221          138 SPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKG-CNYGPPYEWQV-YNTLGGSHGVPRVHFK  215 (708)
Q Consensus       138 ~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~-~~~~~~~Ei~i-l~~L~h~~~v~~~~~~  215 (708)
                      .++|++++.||+|+||.||+|++..          +++.||||++...... ....+..|+.+ ++.+.|+|++..+..+
T Consensus        50 ~~~~~~~~~lG~G~~g~Vy~~~~~~----------~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~  119 (340)
T 3an0_A           50 ADDLEPIMELGRGAYGVVEKMRHVP----------SGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGAL  119 (340)
T ss_dssp             SSCEEEEEEEEECSSEEEEEEEETT----------TTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEE
T ss_pred             hhheeEeeEecccCCEEEEEEEEcC----------CCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEE
Confidence            4579999999999999999999977          7899999998765321 12234455555 6677888766665554


Q ss_pred             eeeCCEEEEEEecCCCCHHHHHhc---cCCCCCHHHHHHHHHHHHHHHHHHHhC-CceecCCCCCcEEeCCCCCCCCCcE
Q 005221          216 GRQGDYYVMVMDMLGPSLWDVWNN---NSHTMSIEMVACIAIEAISILEKMHSK-GYVHGDVKPENFLLGPPGTPDEKKL  291 (708)
Q Consensus       216 ~~~~~~~~lvme~~ggsL~~~l~~---~~~~l~~~~~~~i~~qil~aL~yLH~~-gIvHrDIKP~NILl~~~g~~~~~~v  291 (708)
                       ...+.++|||||++++|.+++..   .+..+++..++.|+.||+.||.|||++ ||+||||||+|||++.++     .+
T Consensus       120 -~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~~ivH~Dlkp~NIl~~~~~-----~~  193 (340)
T 3an0_A          120 -FREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALG-----QV  193 (340)
T ss_dssp             -ECSSCEEEEECCCSEEHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHHTCCCCCSCCSTTEEECSTT-----CE
T ss_pred             -EeCCcEEEEHHHhhCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCC-----CE
Confidence             56678999999998899988764   455799999999999999999999987 999999999999998877     59


Q ss_pred             EEeccCccccccCCCCCccccccCCCceeeccccccchhhhcC----CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCC
Q 005221          292 FLVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLG----RTGSRRDDLESLAYTLIFLLRGRLPWQGYQGEN  367 (708)
Q Consensus       292 kL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~----~~~s~~~DIwSlGviL~eLltG~~Pf~~~~~~~  367 (708)
                      ||+|||+++.......         ....+||+.|+|||++.+    ..++.++|||||||+||+|++|+.||.......
T Consensus       194 kl~Dfg~~~~~~~~~~---------~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~~  264 (340)
T 3an0_A          194 KMCDFGISGYLVDSVA---------KTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPF  264 (340)
T ss_dssp             EECCCSHHHHHSCHHH---------HHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCHH
T ss_pred             EEeeCCCceecccccc---------cccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccchH
Confidence            9999999987643211         012459999999999753    478999999999999999999999998643211


Q ss_pred             chhhhhhhccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhHHHHhccc
Q 005221          368 KGFLVCKKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKLIYQVGHK  445 (708)
Q Consensus       368 ~~~~i~~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~~f~~~~~  445 (708)
                      .  .+........+......+                     ...+.+||.+||..||++||++.|+++||||.....
T Consensus       265 ~--~~~~~~~~~~~~~~~~~~---------------------~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~  319 (340)
T 3an0_A          265 Q--QLKQVVEEPSPQLPADKF---------------------SAEFVDFTSQCLKKNSKERPTYPELMQHPFFTLHES  319 (340)
T ss_dssp             H--HHHHHHHSCCCCCCGGGS---------------------CHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHHTT
T ss_pred             H--HHHHHhcCCCCCCCcccC---------------------CHHHHHHHHHHccCCcccCcCHHHHhcCcCcccccc
Confidence            1  111111111111000011                     247899999999999999999999999999986543


No 159
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00  E-value=2.6e-41  Score=350.18  Aligned_cols=252  Identities=15%  Similarity=0.144  Sum_probs=203.0

Q ss_pred             CCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCCCCCCChHHHHHHHHcCCCCCccEEEEEee
Q 005221          138 SPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNTLGGSHGVPRVHFKGR  217 (708)
Q Consensus       138 ~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~~~~~~~~Ei~il~~L~h~~~v~~~~~~~~  217 (708)
                      .++|++++.||+|+||.||+|++..           +..||+|++...... ...+.+|++++..|+|+|++..+.. ..
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~~~-----------~~~vavK~~~~~~~~-~~~~~~E~~~l~~l~h~~i~~~~~~-~~   73 (268)
T 3sxs_A            7 REEITLLKELGSGQFGVVKLGKWKG-----------QYDVAVKMIKEGSMS-EDEFFQEAQTMMKLSHPKLVKFYGV-CS   73 (268)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETT-----------TEEEEEEEECBTTBC-HHHHHHHHHHHHHCCCTTBCCEEEE-EC
T ss_pred             hhheeeeeeeccCCCceEEEEEecC-----------ceeEEEEEeccCCCc-HHHHHHHHHHHHhCCCCCEeeEEEE-Ec
Confidence            3579999999999999999997744           567999999765332 3357889999999999886665554 46


Q ss_pred             eCCEEEEEEecC-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcEEEecc
Q 005221          218 QGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDL  296 (708)
Q Consensus       218 ~~~~~~lvme~~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~vkL~DF  296 (708)
                      ....+++|||++ +++|.+++...+..+++..++.++.||+.||.|||++||+||||||+|||++.++     .+||+||
T Consensus        74 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~-----~~~l~Df  148 (268)
T 3sxs_A           74 KEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVDRDL-----CVKVSDF  148 (268)
T ss_dssp             SSSSEEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEEESSCSGGGEEECTTC-----CEEECCT
T ss_pred             cCCceEEEEEccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCcceEEECCCC-----CEEEccC
Confidence            677799999999 8999999988766799999999999999999999999999999999999998877     5999999


Q ss_pred             CccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCCchhhhhhh
Q 005221          297 GLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLR-GRLPWQGYQGENKGFLVCKK  375 (708)
Q Consensus       297 Gla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLlt-G~~Pf~~~~~~~~~~~i~~~  375 (708)
                      |++..........       .....+|+.|+|||++.+..++.++|||||||++|+|++ |++||...........+...
T Consensus       149 g~~~~~~~~~~~~-------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~  221 (268)
T 3sxs_A          149 GMTRYVLDDQYVS-------SVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQG  221 (268)
T ss_dssp             TCEEECCTTCEEE-------CCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTT
T ss_pred             ccceecchhhhhc-------ccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHHHHHHHcC
Confidence            9998765542211       112347888999999999999999999999999999999 99999876544433333222


Q ss_pred             ccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhHH
Q 005221          376 KMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKLI  439 (708)
Q Consensus       376 ~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~~  439 (708)
                      .....+    ..+                     ...+.+||.+||..||++|||+.++++++-
T Consensus       222 ~~~~~~----~~~---------------------~~~l~~li~~~l~~~p~~Rps~~~ll~~L~  260 (268)
T 3sxs_A          222 HRLYRP----HLA---------------------SDTIYQIMYSCWHELPEKRPTFQQLLSSIE  260 (268)
T ss_dssp             CCCCCC----TTS---------------------CHHHHHHHHHTTCSSGGGSCCHHHHHHHHG
T ss_pred             CCCCCC----CcC---------------------hHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence            211111    111                     146889999999999999999999999863


No 160
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00  E-value=3e-41  Score=356.18  Aligned_cols=260  Identities=20%  Similarity=0.196  Sum_probs=205.6

Q ss_pred             CCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCC----CCCCCCChHHHHHHHHcCCCCCccEEEE
Q 005221          139 PMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSS----KGCNYGPPYEWQVYNTLGGSHGVPRVHF  214 (708)
Q Consensus       139 ~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~----~~~~~~~~~Ei~il~~L~h~~~v~~~~~  214 (708)
                      ++|++++.||+|+||.||+|++..          +++.||+|++....    ......+.+|+++++.|+|+|++..+..
T Consensus         5 ~~y~i~~~lg~G~~g~V~~~~~~~----------~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~   74 (305)
T 2wtk_C            5 GKYLMGDLLGEGSYGKVKEVLDSE----------TLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDV   74 (305)
T ss_dssp             CCBCCCCEEEECSSCEEEEEEBTT----------TCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEE
T ss_pred             cceeEeeEEecCCCeEEEEEEECC----------CCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEE
Confidence            479999999999999999999877          78999999987542    2223457889999999999998877776


Q ss_pred             Ee-eeCCEEEEEEecCCCCHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcEE
Q 005221          215 KG-RQGDYYVMVMDMLGPSLWDVWNNN-SHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLF  292 (708)
Q Consensus       215 ~~-~~~~~~~lvme~~ggsL~~~l~~~-~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~vk  292 (708)
                      +. .....+++||||+.++|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++.++     .+|
T Consensus        75 ~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~NIl~~~~~-----~~k  149 (305)
T 2wtk_C           75 LYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGG-----TLK  149 (305)
T ss_dssp             EECC---CEEEEEECCSEEHHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTC-----CEE
T ss_pred             EEcCCCCeEEEEehhccCCHHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEcCCC-----cEE
Confidence            54 455689999999977788887753 45699999999999999999999999999999999999998877     599


Q ss_pred             EeccCccccccCCCCCccccccCCCceeeccccccchhhhcCCCC--CchhhHHHHHHHHHHHHhCCCCCCCCCCCCchh
Q 005221          293 LVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTG--SRRDDLESLAYTLIFLLRGRLPWQGYQGENKGF  370 (708)
Q Consensus       293 L~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~--s~~~DIwSlGviL~eLltG~~Pf~~~~~~~~~~  370 (708)
                      |+|||++...........      .....||+.|+|||++.+...  +.++|||||||++|+|++|+.||.+.+......
T Consensus       150 l~dfg~~~~~~~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~  223 (305)
T 2wtk_C          150 ISALGVAEALHPFAADDT------CRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFE  223 (305)
T ss_dssp             ECCCTTCEECCTTCSSCE------ECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH
T ss_pred             eeccccccccCccccccc------cccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHHHHH
Confidence            999999987654322111      123559999999999987543  789999999999999999999998754333222


Q ss_pred             hhhhhccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhHHHHhccc
Q 005221          371 LVCKKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKLIYQVGHK  445 (708)
Q Consensus       371 ~i~~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~~f~~~~~  445 (708)
                      .+......     ++..++                     ..+.+||.+||..||.+|||+.|+++|+||.....
T Consensus       224 ~i~~~~~~-----~~~~~~---------------------~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~~~~~  272 (305)
T 2wtk_C          224 NIGKGSYA-----IPGDCG---------------------PPLSDLLKGMLEYEPAKRFSIRQIRQHSWFRKKHP  272 (305)
T ss_dssp             HHHHCCCC-----CCSSSC---------------------HHHHHHHHHHTCSSTTTSCCHHHHHHSHHHHSCCC
T ss_pred             HHhcCCCC-----CCCccC---------------------HHHHHHHHHHccCChhhCCCHHHHhcCcccccCCC
Confidence            22222111     111122                     46789999999999999999999999999986544


No 161
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00  E-value=2.3e-41  Score=353.54  Aligned_cols=252  Identities=16%  Similarity=0.203  Sum_probs=200.6

Q ss_pred             CCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCCCCCCChHHHHHHHHcCCCCCccEEEEEee
Q 005221          138 SPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNTLGGSHGVPRVHFKGR  217 (708)
Q Consensus       138 ~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~~~~~~~~Ei~il~~L~h~~~v~~~~~~~~  217 (708)
                      .++|++++.||+|+||.||+|++..           +..||+|++...... ...+.+|+.++..|+|+|++..+.. +.
T Consensus        23 ~~~y~~~~~lg~G~~g~V~~~~~~~-----------~~~vavK~~~~~~~~-~~~~~~E~~~l~~l~h~~i~~~~~~-~~   89 (283)
T 3gen_A           23 PKDLTFLKELGTGQFGVVKYGKWRG-----------QYDVAIKMIKEGSMS-EDEFIEEAKVMMNLSHEKLVQLYGV-CT   89 (283)
T ss_dssp             GGGEEEEEECC---CEEEEEEEETT-----------TEEEEEEEECTTSBC-HHHHHHHHHHHHTCCCTTBCCEEEE-EC
T ss_pred             HHHHHhHhhcCCCCCceEEEEEEcC-----------CCeEEEEEecCCCCC-HHHHHHHHHHHhcCCCCCEeeEEEE-Ee
Confidence            4579999999999999999998744           678999999865322 3457889999999999886666555 46


Q ss_pred             eCCEEEEEEecC-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcEEEecc
Q 005221          218 QGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDL  296 (708)
Q Consensus       218 ~~~~~~lvme~~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~vkL~DF  296 (708)
                      ..+.+++||||+ +++|.+++......+++..++.++.||+.||.|||++||+||||||+|||++.++     .+||+||
T Consensus        90 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nili~~~~-----~~kl~Df  164 (283)
T 3gen_A           90 KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQG-----VVKVSDF  164 (283)
T ss_dssp             SSSSEEEEECCCTTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTS-----CEEECST
T ss_pred             cCCCeEEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCccceEEEcCCC-----CEEEccc
Confidence            677799999999 8999999987656799999999999999999999999999999999999998777     5999999


Q ss_pred             CccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCCchhhhhhh
Q 005221          297 GLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLR-GRLPWQGYQGENKGFLVCKK  375 (708)
Q Consensus       297 Gla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLlt-G~~Pf~~~~~~~~~~~i~~~  375 (708)
                      |+++........       ......+|+.|+|||++.+..++.++|||||||++|+|++ |++||...........+...
T Consensus       165 g~~~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~  237 (283)
T 3gen_A          165 GLSRYVLDDEYT-------SSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG  237 (283)
T ss_dssp             TGGGGBCCHHHH-------STTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTT
T ss_pred             cccccccccccc-------cccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhHHHHHHhcc
Confidence            999865442111       1112347889999999999999999999999999999998 99999886654443333332


Q ss_pred             ccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhHH
Q 005221          376 KMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKLI  439 (708)
Q Consensus       376 ~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~~  439 (708)
                      .....+    ..++                     ..+.+||.+||..||.+|||+.++++|+.
T Consensus       238 ~~~~~~----~~~~---------------------~~l~~li~~~l~~~p~~Rps~~~ll~~L~  276 (283)
T 3gen_A          238 LRLYRP----HLAS---------------------EKVYTIMYSCWHEKADERPTFKILLSNIL  276 (283)
T ss_dssp             CCCCCC----TTCC---------------------HHHHHHHHHTTCSSGGGSCCHHHHHHHHH
T ss_pred             cCCCCC----CcCC---------------------HHHHHHHHHHccCChhHCcCHHHHHHHHH
Confidence            211111    1111                     46889999999999999999999999975


No 162
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00  E-value=8e-41  Score=355.54  Aligned_cols=250  Identities=16%  Similarity=0.134  Sum_probs=184.5

Q ss_pred             CCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCC--CCCCChHHHHHHHHcCCCCCccEEEEE
Q 005221          138 SPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKG--CNYGPPYEWQVYNTLGGSHGVPRVHFK  215 (708)
Q Consensus       138 ~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~--~~~~~~~Ei~il~~L~h~~~v~~~~~~  215 (708)
                      ..+|++.+.||+|+||.||+|++            .+..||||++......  ....+.+|+.+|++|+|+|++..+..+
T Consensus        36 ~~~y~i~~~lG~G~~g~V~~~~~------------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~  103 (309)
T 3p86_A           36 WCDLNIKEKIGAGSFGTVHRAEW------------HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV  103 (309)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEE------------TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             hhHceeeeEeecCCCeEEEEEEE------------CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEE
Confidence            35799999999999999999987            4678999998765321  122467899999999998876665554


Q ss_pred             eeeCCEEEEEEecC-CCCHHHHHhccCC--CCCHHHHHHHHHHHHHHHHHHHhCC--ceecCCCCCcEEeCCCCCCCCCc
Q 005221          216 GRQGDYYVMVMDML-GPSLWDVWNNNSH--TMSIEMVACIAIEAISILEKMHSKG--YVHGDVKPENFLLGPPGTPDEKK  290 (708)
Q Consensus       216 ~~~~~~~~lvme~~-ggsL~~~l~~~~~--~l~~~~~~~i~~qil~aL~yLH~~g--IvHrDIKP~NILl~~~g~~~~~~  290 (708)
                       ...+.+++||||+ +++|.+++...+.  .+++..++.++.||+.||.|||++|  |+||||||+|||++.++     .
T Consensus       104 -~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIll~~~~-----~  177 (309)
T 3p86_A          104 -TQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKY-----T  177 (309)
T ss_dssp             -CSTTCCEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEEECTTC-----C
T ss_pred             -EECCceEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCEECCCCChhhEEEeCCC-----c
Confidence             6667789999999 8899999987542  3999999999999999999999999  99999999999998877     5


Q ss_pred             EEEeccCccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCchh
Q 005221          291 LFLVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGF  370 (708)
Q Consensus       291 vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLltG~~Pf~~~~~~~~~~  370 (708)
                      +||+|||+++.......        .....+||+.|+|||++.+..++.++|||||||+||+|++|+.||.+.+..+...
T Consensus       178 ~kL~Dfg~a~~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~~~  249 (309)
T 3p86_A          178 VKVCDFGLSRLKASTFL--------SSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVA  249 (309)
T ss_dssp             EEECCCC-------------------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHHHH
T ss_pred             EEECCCCCCcccccccc--------ccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence            99999999986443321        1224669999999999999999999999999999999999999998765443322


Q ss_pred             hhhhhccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHh
Q 005221          371 LVCKKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQK  437 (708)
Q Consensus       371 ~i~~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h  437 (708)
                      .+..   ......++..++.                     .+.+||.+||..||.+|||+.++++.
T Consensus       250 ~~~~---~~~~~~~~~~~~~---------------------~l~~li~~~l~~dP~~Rps~~~ll~~  292 (309)
T 3p86_A          250 AVGF---KCKRLEIPRNLNP---------------------QVAAIIEGCWTNEPWKRPSFATIMDL  292 (309)
T ss_dssp             HHHH---SCCCCCCCTTSCH---------------------HHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHh---cCCCCCCCccCCH---------------------HHHHHHHHHccCChhhCcCHHHHHHH
Confidence            2211   1122223334444                     45556666666666666666666553


No 163
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00  E-value=1.8e-41  Score=356.99  Aligned_cols=272  Identities=21%  Similarity=0.229  Sum_probs=187.2

Q ss_pred             CCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCC-CCCCCCChHHHHHHHHcCCCCCccEEEEEe
Q 005221          138 SPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSS-KGCNYGPPYEWQVYNTLGGSHGVPRVHFKG  216 (708)
Q Consensus       138 ~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~-~~~~~~~~~Ei~il~~L~h~~~v~~~~~~~  216 (708)
                      .++|++.+.||+|+||.||+|++..          +++.||||++.... ......+.+|+.+++.++|+|++..+.. +
T Consensus        14 ~~~y~~~~~lg~G~~g~V~~~~~~~----------~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~-~   82 (303)
T 2vwi_A           14 RDDYELQEVIGSGATAVVQAAYCAP----------KKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTS-F   82 (303)
T ss_dssp             CCCCEEEEECC---CCCEEEEEC--------------CEEEEECCC----------------CCCCCCCTTBCCEEEE-E
T ss_pred             hhhhhhhheeccccceEEEEEEECC----------CCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEE-E
Confidence            4579999999999999999999877          68899999987542 2334567889999999999886665554 4


Q ss_pred             eeCCEEEEEEecC-CCCHHHHHhc-------cCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCC
Q 005221          217 RQGDYYVMVMDML-GPSLWDVWNN-------NSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDE  288 (708)
Q Consensus       217 ~~~~~~~lvme~~-ggsL~~~l~~-------~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~  288 (708)
                      ...+..++||||+ +++|.+++..       ....+++..++.++.||+.||.|||++||+||||||+|||++.++    
T Consensus        83 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~----  158 (303)
T 2vwi_A           83 VVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDG----  158 (303)
T ss_dssp             ESSSCEEEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTC----
T ss_pred             eecCCcEEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCCChhhEEEcCCC----
Confidence            5667799999999 8999999874       234699999999999999999999999999999999999998877    


Q ss_pred             CcEEEeccCccccccCCCCCccccccCCCceeeccccccchhhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCC
Q 005221          289 KKLFLVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLG-RTGSRRDDLESLAYTLIFLLRGRLPWQGYQGEN  367 (708)
Q Consensus       289 ~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~-~~~s~~~DIwSlGviL~eLltG~~Pf~~~~~~~  367 (708)
                       .+||+|||++...........   .......+||+.|+|||++.+ ..++.++|||||||+||+|++|+.||.......
T Consensus       159 -~~kl~dfg~~~~~~~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~  234 (303)
T 2vwi_A          159 -SVQIADFGVSAFLATGGDITR---NKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMK  234 (303)
T ss_dssp             -CEEECCCHHHHHCC------------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGG
T ss_pred             -CEEEEeccchheeccCCCccc---hhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhh
Confidence             599999999987654321111   111234679999999999876 578999999999999999999999998866544


Q ss_pred             chhhhhhhccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhHHHHhcc
Q 005221          368 KGFLVCKKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKLIYQVGH  444 (708)
Q Consensus       368 ~~~~i~~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~~f~~~~  444 (708)
                      ................    ...          ......  -...+.+||.+||..||.+||++.++++||||+...
T Consensus       235 ~~~~~~~~~~~~~~~~----~~~----------~~~~~~--~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~  295 (303)
T 2vwi_A          235 VLMLTLQNDPPSLETG----VQD----------KEMLKK--YGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQKAK  295 (303)
T ss_dssp             HHHHHHTSSCCCTTC-------------------CCCCC--CCHHHHHHHHHHCCSSGGGSCCHHHHHTSTTC----
T ss_pred             HHHHHhccCCCccccc----ccc----------chhhhh--hhHHHHHHHHHHccCChhhCcCHHHHhhChhhhcCC
Confidence            3322222111111100    000          000001  124789999999999999999999999999987654


No 164
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00  E-value=8.2e-41  Score=359.58  Aligned_cols=261  Identities=20%  Similarity=0.178  Sum_probs=178.1

Q ss_pred             CCCeEEEE-eEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCCCCCCChHHHH-HHHHcCCCCCccEEEEE
Q 005221          138 SPMYRLER-KLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQ-VYNTLGGSHGVPRVHFK  215 (708)
Q Consensus       138 ~~~Y~i~~-~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~~~~~~~~Ei~-il~~L~h~~~v~~~~~~  215 (708)
                      .++|.+++ .||+|+||.||+|++..          +++.||||++....     ...+|+. .++.++|+|++..+..+
T Consensus        27 ~~~y~i~~~~lG~G~~g~V~~~~~~~----------~~~~vavK~~~~~~-----~~~~e~~~~~~~~~h~~i~~~~~~~   91 (336)
T 3fhr_A           27 TDDYQLSKQVLGLGVNGKVLECFHRR----------TGQKCALKLLYDSP-----KARQEVDHHWQASGGPHIVCILDVY   91 (336)
T ss_dssp             GGTEEEEEEEEEEETTEEEEEEEETT----------TCCEEEEEEEESSH-----HHHHHHHHHHHHTTSTTBCCEEEEE
T ss_pred             cceeEecceeeeeCCCeEEEEEEECC----------CCCEEEEEEecCcH-----HHHHHHHHHHHhcCCCChHHHHHHH
Confidence            34799966 59999999999999987          78999999987532     2233444 45667788877666655


Q ss_pred             ee---eCCEEEEEEecC-CCCHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCc
Q 005221          216 GR---QGDYYVMVMDML-GPSLWDVWNNNS-HTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKK  290 (708)
Q Consensus       216 ~~---~~~~~~lvme~~-ggsL~~~l~~~~-~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~  290 (708)
                      ..   .+..++|||||+ |++|.+++...+ ..+++..++.++.||+.||.|||++||+||||||+|||++.++  ....
T Consensus        92 ~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~ivH~dlkp~NIll~~~~--~~~~  169 (336)
T 3fhr_A           92 ENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKE--KDAV  169 (336)
T ss_dssp             EEEETTEEEEEEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSS--TTCC
T ss_pred             hhccCCCceEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEEecC--CCce
Confidence            43   256789999999 789999998764 4699999999999999999999999999999999999998654  2346


Q ss_pred             EEEeccCccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCchh
Q 005221          291 LFLVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGF  370 (708)
Q Consensus       291 vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLltG~~Pf~~~~~~~~~~  370 (708)
                      +||+|||+++.......          ...+||+.|+|||++.+..++.++|||||||+||+|++|+.||.+........
T Consensus       170 ~kl~Dfg~~~~~~~~~~----------~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~  239 (336)
T 3fhr_A          170 LKLTDFGFAKETTQNAL----------QTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISP  239 (336)
T ss_dssp             EEECCCTTCEEC--------------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC----------
T ss_pred             EEEeccccceecccccc----------ccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhh
Confidence            99999999986543221          23568999999999999999999999999999999999999998755433211


Q ss_pred             hhhhhccCCCCCCccCCCChHHHHHHHHHHcCCCCC-cccHHHHHHHHHhhhCCCCCCCCcchHHHHhHHHHhcc
Q 005221          371 LVCKKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDE-EPNYAKYISLFDGIVGPNPDIRPISTEGAQKLIYQVGH  444 (708)
Q Consensus       371 ~i~~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~-rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~~f~~~~  444 (708)
                      .......                   .......... ..-...+.+||.+||..||.+|||+.|+++||||+...
T Consensus       240 ~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~  295 (336)
T 3fhr_A          240 GMKRRIR-------------------LGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQSM  295 (336)
T ss_dssp             ------------------------------CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHTGG
T ss_pred             hHHHhhh-------------------ccccccCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhcCccccccc
Confidence            1110000                   0000000000 01125789999999999999999999999999998654


No 165
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00  E-value=9.3e-41  Score=364.19  Aligned_cols=261  Identities=17%  Similarity=0.180  Sum_probs=199.8

Q ss_pred             CCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCC-CCCCChHHHHHHHHc-CCCCCccEEEEE
Q 005221          138 SPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKG-CNYGPPYEWQVYNTL-GGSHGVPRVHFK  215 (708)
Q Consensus       138 ~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~-~~~~~~~Ei~il~~L-~h~~~v~~~~~~  215 (708)
                      .++|++++.||+|+||.||+|++....   ......+..||||+++..... ....+.+|+.+|+.| +|+|+|..+.. 
T Consensus        80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~---~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~-  155 (370)
T 2psq_A           80 RDKLTLGKPLGEGCFGQVVMAEAVGID---KDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGA-  155 (370)
T ss_dssp             GGGEEEEEEESCCSSSEEEEEEEETCS---TTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEE-
T ss_pred             HHHCEeeeEEeeCCCeeEEEEEEeccc---CcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEE-
Confidence            357999999999999999999986410   111235778999999765321 223577899999999 67776555554 


Q ss_pred             eeeCCEEEEEEecC-CCCHHHHHhccC---------------CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEE
Q 005221          216 GRQGDYYVMVMDML-GPSLWDVWNNNS---------------HTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFL  279 (708)
Q Consensus       216 ~~~~~~~~lvme~~-ggsL~~~l~~~~---------------~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NIL  279 (708)
                      +...+.+||||||+ +|+|.+++....               ..+++..++.++.||+.||.|||++|||||||||+|||
T Consensus       156 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIl  235 (370)
T 2psq_A          156 CTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVL  235 (370)
T ss_dssp             ECSSSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEE
T ss_pred             EccCCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchhhEE
Confidence            46677799999999 889999997643               35899999999999999999999999999999999999


Q ss_pred             eCCCCCCCCCcEEEeccCccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCC
Q 005221          280 LGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLR-GRL  358 (708)
Q Consensus       280 l~~~g~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLlt-G~~  358 (708)
                      |+.++     .+||+|||+++.........      ......||+.|+|||++.+..++.++|||||||+||||++ |+.
T Consensus       236 l~~~~-----~~kl~DFG~a~~~~~~~~~~------~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~  304 (370)
T 2psq_A          236 VTENN-----VMKIADFGLARDINNIDYYK------KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGS  304 (370)
T ss_dssp             ECTTC-----CEEECCCSSCEETTCCCTTC------TTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCC
T ss_pred             ECCCC-----CEEEccccCCcccCccccee------cccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCC
Confidence            98877     59999999998765432211      1123458899999999999999999999999999999999 999


Q ss_pred             CCCCCCCCCchhhhhhhccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhH
Q 005221          359 PWQGYQGENKGFLVCKKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKL  438 (708)
Q Consensus       359 Pf~~~~~~~~~~~i~~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~  438 (708)
                      ||.+....+....+......    ..+..++                     ..+.+||.+||..||++||++.|+++++
T Consensus       305 p~~~~~~~~~~~~~~~~~~~----~~~~~~~---------------------~~l~~li~~~l~~dP~~Rpt~~ell~~L  359 (370)
T 2psq_A          305 PYPGIPVEELFKLLKEGHRM----DKPANCT---------------------NELYMMMRDCWHAVPSQRPTFKQLVEDL  359 (370)
T ss_dssp             SSTTCCGGGHHHHHHTTCCC----CCCTTSC---------------------HHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             CCCCCCHHHHHHHHhcCCCC----CCCCCCC---------------------HHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence            99986554433333322211    1122233                     3567777778888888888888777764


No 166
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00  E-value=2.1e-40  Score=346.89  Aligned_cols=256  Identities=19%  Similarity=0.227  Sum_probs=200.7

Q ss_pred             CCCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCCCC-------CCChHHHHHHHHcCCCCCc
Q 005221          137 GSPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCN-------YGPPYEWQVYNTLGGSHGV  209 (708)
Q Consensus       137 ~~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~~~-------~~~~~Ei~il~~L~h~~~v  209 (708)
                      ..++|++.+.||+|+||.||+|++..          +++.||+|++........       ..+.+|+.+++.++|+|++
T Consensus        17 ~~~~y~~~~~lg~G~~g~V~~~~~~~----------~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~   86 (287)
T 4f0f_A           17 ADNEIEYEKQIGKGGFGLVHKGRLVK----------DKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV   86 (287)
T ss_dssp             CSTTEEEEEECCCCSSSCEEEEEETT----------TCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBC
T ss_pred             hhccceehhccccCCceeEEEEEEcC----------CceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCch
Confidence            34689999999999999999999977          789999999876533211       3567899999999999877


Q ss_pred             cEEEEEeeeCCEEEEEEecC-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC--ceecCCCCCcEEeCCCCCC
Q 005221          210 PRVHFKGRQGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKG--YVHGDVKPENFLLGPPGTP  286 (708)
Q Consensus       210 ~~~~~~~~~~~~~~lvme~~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~g--IvHrDIKP~NILl~~~g~~  286 (708)
                      ..+..+ ....  ++||||+ +++|.+.+......+++..++.++.||+.||.|||++|  |+||||||+|||++.++..
T Consensus        87 ~~~~~~-~~~~--~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dikp~Nil~~~~~~~  163 (287)
T 4f0f_A           87 KLYGLM-HNPP--RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDEN  163 (287)
T ss_dssp             CEEEEE-TTTT--EEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCSGGGEEESCCCTT
T ss_pred             hhheee-cCCC--eEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcceEEEeccCCC
Confidence            776655 3333  6899999 79999999887778999999999999999999999999  9999999999999887754


Q ss_pred             CCCcEEEeccCccccccCCCCCccccccCCCceeeccccccchhhhc--CCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q 005221          287 DEKKLFLVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHL--GRTGSRRDDLESLAYTLIFLLRGRLPWQGYQ  364 (708)
Q Consensus       287 ~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~--~~~~s~~~DIwSlGviL~eLltG~~Pf~~~~  364 (708)
                      ....+||+|||+++......           ....||+.|+|||++.  +..++.++|||||||++|+|++|+.||....
T Consensus       164 ~~~~~kl~Dfg~~~~~~~~~-----------~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~  232 (287)
T 4f0f_A          164 APVCAKVADFGLSQQSVHSV-----------SGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYS  232 (287)
T ss_dssp             CSCCEEECCCTTCBCCSSCE-----------ECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCC
T ss_pred             CceeEEeCCCCccccccccc-----------cccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCcccc
Confidence            45569999999997543321           2356999999999984  4567899999999999999999999998765


Q ss_pred             CCCchhhhhhhccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhH
Q 005221          365 GENKGFLVCKKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKL  438 (708)
Q Consensus       365 ~~~~~~~i~~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~  438 (708)
                      ............. .....++..+|                     ..+.+||.+||..||.+|||+.|+++.+
T Consensus       233 ~~~~~~~~~~~~~-~~~~~~~~~~~---------------------~~l~~li~~~l~~dp~~Rps~~~ll~~L  284 (287)
T 4f0f_A          233 YGKIKFINMIREE-GLRPTIPEDCP---------------------PRLRNVIELCWSGDPKKRPHFSYIVKEL  284 (287)
T ss_dssp             CCHHHHHHHHHHS-CCCCCCCTTSC---------------------HHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             ccHHHHHHHHhcc-CCCCCCCcccC---------------------HHHHHHHHHHhcCChhhCcCHHHHHHHH
Confidence            5443222211111 11112222333                     4677888888888888888888888764


No 167
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00  E-value=1.4e-41  Score=354.09  Aligned_cols=257  Identities=19%  Similarity=0.169  Sum_probs=205.4

Q ss_pred             CCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCC--CCCCCChHHHHHHHHcCCCCCccEEEEEe
Q 005221          139 PMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSK--GCNYGPPYEWQVYNTLGGSHGVPRVHFKG  216 (708)
Q Consensus       139 ~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~--~~~~~~~~Ei~il~~L~h~~~v~~~~~~~  216 (708)
                      ++|++++.||+|+||.||+|++..          +++.||+|++.....  .....+.+|+.+++.|+|+|++..+..+.
T Consensus         6 ~~y~~~~~lg~G~~g~V~~~~~~~----------~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~   75 (279)
T 2w5a_A            6 EDYEVLYTIGTGSYGRCQKIRRKS----------DGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRII   75 (279)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEETT----------TCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE
T ss_pred             hheeeehhccCCCCcEEEEEEECC----------CCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEe
Confidence            479999999999999999999977          789999999976532  12234678999999999999887776654


Q ss_pred             -eeCCEEEEEEecC-CCCHHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHHhCC-----ceecCCCCCcEEeCCCCCC
Q 005221          217 -RQGDYYVMVMDML-GPSLWDVWNNN---SHTMSIEMVACIAIEAISILEKMHSKG-----YVHGDVKPENFLLGPPGTP  286 (708)
Q Consensus       217 -~~~~~~~lvme~~-ggsL~~~l~~~---~~~l~~~~~~~i~~qil~aL~yLH~~g-----IvHrDIKP~NILl~~~g~~  286 (708)
                       ..+..+++||||+ +++|.+++...   ...+++..++.++.||+.||.|||++|     |+||||||+|||++.++  
T Consensus        76 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~--  153 (279)
T 2w5a_A           76 DRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQ--  153 (279)
T ss_dssp             EGGGTEEEEEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSS--
T ss_pred             cCCCceEEEEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCC--
Confidence             4567899999999 78999998753   335999999999999999999999999     99999999999998777  


Q ss_pred             CCCcEEEeccCccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCC
Q 005221          287 DEKKLFLVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGE  366 (708)
Q Consensus       287 ~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLltG~~Pf~~~~~~  366 (708)
                         .+||+|||+++........        .....||+.|+|||++.+..++.++|||||||++|+|++|+.||...+..
T Consensus       154 ---~~kl~dfg~~~~~~~~~~~--------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~  222 (279)
T 2w5a_A          154 ---NVKLGDFGLARILNHDTSF--------AKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQK  222 (279)
T ss_dssp             ---CEEECCCCHHHHC---CHH--------HHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred             ---CEEEecCchheeecccccc--------ccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHH
Confidence               5999999999876543211        11356999999999999999999999999999999999999999876543


Q ss_pred             CchhhhhhhccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhHHHHhc
Q 005221          367 NKGFLVCKKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKLIYQVG  443 (708)
Q Consensus       367 ~~~~~i~~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~~f~~~  443 (708)
                      +....+........+    ..++                     ..+.+||.+||..||.+||++.|+++|+|+...
T Consensus       223 ~~~~~i~~~~~~~~~----~~~~---------------------~~l~~li~~~l~~~p~~Rps~~~ll~~~~~~~~  274 (279)
T 2w5a_A          223 ELAGKIREGKFRRIP----YRYS---------------------DELNEIITRMLNLKDYHRPSVEEILENPLILEH  274 (279)
T ss_dssp             HHHHHHHHTCCCCCC----TTSC---------------------HHHHHHHHHHTCSSGGGSCCHHHHHTSTTCCGG
T ss_pred             HHHHHHhhcccccCC----cccC---------------------HHHHHHHHHHcCCCcccCCCHHHHHhChhhhhh
Confidence            333333332221111    1122                     478899999999999999999999999996544


No 168
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00  E-value=1.5e-40  Score=352.97  Aligned_cols=258  Identities=19%  Similarity=0.225  Sum_probs=198.7

Q ss_pred             CCCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCC--CCCCChHHHHHHHHcCCCCCccEEEE
Q 005221          137 GSPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKG--CNYGPPYEWQVYNTLGGSHGVPRVHF  214 (708)
Q Consensus       137 ~~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~--~~~~~~~Ei~il~~L~h~~~v~~~~~  214 (708)
                      ...+|.+.++||+|+||.||+|++..             .+|+|+++.....  ....+.+|+.+|+.++|+|++..+.+
T Consensus        34 ~~~~~~~~~~lG~G~~g~Vy~~~~~~-------------~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~  100 (307)
T 3lb7_A           34 EASEVMLSTRIGSGSFGTVYKGKWHG-------------DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGY  100 (307)
T ss_dssp             CTTSCCEEEEEEECSSCEEEEEESSS-------------EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEE
T ss_pred             cccceEEEeEecCCCCeEEEEEEECC-------------EEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEE
Confidence            34689999999999999999998633             5889987754221  22356789999999999998776665


Q ss_pred             EeeeCCEEEEEEecC-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcEEE
Q 005221          215 KGRQGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFL  293 (708)
Q Consensus       215 ~~~~~~~~~lvme~~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~vkL  293 (708)
                      + . .+.+++|||++ |++|.+++......+++..++.|+.||+.||.|||++||+||||||+|||++.++     .+||
T Consensus       101 ~-~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~-----~~kl  173 (307)
T 3lb7_A          101 M-T-KDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGL-----TVKI  173 (307)
T ss_dssp             E-C-SSSCEEEEECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCSSSEEECTTS-----CEEE
T ss_pred             E-c-cCcEEEEEecCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEeeCCCChhhEEEcCCC-----CEEE
Confidence            4 3 44578999999 8999999987777899999999999999999999999999999999999998877     5999


Q ss_pred             eccCccccccCCCCCccccccCCCceeeccccccchhhhc---CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCchh
Q 005221          294 VDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHL---GRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGF  370 (708)
Q Consensus       294 ~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~---~~~~s~~~DIwSlGviL~eLltG~~Pf~~~~~~~~~~  370 (708)
                      +|||+++........      ......+||+.|+|||++.   +..++.++|||||||+||+|++|+.||.+....+...
T Consensus       174 ~DFg~a~~~~~~~~~------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~  247 (307)
T 3lb7_A          174 GDFGLATVKSRWSGS------QQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQII  247 (307)
T ss_dssp             CCCCSSCC------------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHH
T ss_pred             ccCCCceeccccccc------ccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHHHHH
Confidence            999999865432211      1122456999999999987   6678999999999999999999999998765544333


Q ss_pred             hhhhhc-cCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhHHHH
Q 005221          371 LVCKKK-MATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKLIYQ  441 (708)
Q Consensus       371 ~i~~~~-~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~~f~  441 (708)
                      .+.... ..+....+...+|                     ..+.+|+.+||..||++||++.|++++++..
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~---------------------~~l~~li~~~l~~~p~~RPs~~~il~~l~~l  298 (307)
T 3lb7_A          248 FMVGRGYASPDLSKLYKNCP---------------------KAMKRLVADCVKKVKEERPLFPQILSSIELL  298 (307)
T ss_dssp             HHHHHTCCCCCSTTSCSSSC---------------------HHHHHHHHHHSCSSSTTSCCHHHHHHHHHHH
T ss_pred             HHHhcCCCCcchhhhhcCCc---------------------HHHHHHHHHHhhCChhhCcCHHHHHHHHHHH
Confidence            322222 2222222333333                     4677888999999999999999999988743


No 169
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00  E-value=1.9e-40  Score=352.11  Aligned_cols=261  Identities=20%  Similarity=0.210  Sum_probs=197.4

Q ss_pred             CCCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCC--CCCCChHHHHHHHHcCC-CCCccEEE
Q 005221          137 GSPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKG--CNYGPPYEWQVYNTLGG-SHGVPRVH  213 (708)
Q Consensus       137 ~~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~--~~~~~~~Ei~il~~L~h-~~~v~~~~  213 (708)
                      ...+|++++.||+|+||.||+|++.           +++.||||++......  ....+.+|+.++..|+| +++|+.+.
T Consensus        26 ~~~~y~~~~~lg~G~~g~Vy~~~~~-----------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~   94 (313)
T 3cek_A           26 KGRIYSILKQIGSGGSSKVFQVLNE-----------KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY   94 (313)
T ss_dssp             TTEEEEEEEEEECCSSEEEEEEECT-----------TCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEE
T ss_pred             ccceEEEEEEecCCCCEEEEEEEcC-----------CCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEE
Confidence            3457999999999999999999873           3788999998764321  22356789999999986 45566666


Q ss_pred             EEeeeCCEEEEEEecCCCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcEEE
Q 005221          214 FKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFL  293 (708)
Q Consensus       214 ~~~~~~~~~~lvme~~ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~vkL  293 (708)
                      .+...++.++||||+.+++|.+++.... .+++..++.++.||+.||.|||++||+||||||+|||++. +     .+||
T Consensus        95 ~~~~~~~~~~lv~e~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~-~-----~~kL  167 (313)
T 3cek_A           95 DYEITDQYIYMVMECGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD-G-----MLKL  167 (313)
T ss_dssp             EEEECSSEEEEEECCCSEEHHHHHHHCS-SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEET-T-----EEEE
T ss_pred             EEeecCCEEEEEEecCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEEEC-C-----eEEE
Confidence            6777888999999988999999998765 6999999999999999999999999999999999999963 3     6999


Q ss_pred             eccCccccccCCCCCccccccCCCceeeccccccchhhhcC-----------CCCCchhhHHHHHHHHHHHHhCCCCCCC
Q 005221          294 VDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLG-----------RTGSRRDDLESLAYTLIFLLRGRLPWQG  362 (708)
Q Consensus       294 ~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~-----------~~~s~~~DIwSlGviL~eLltG~~Pf~~  362 (708)
                      +|||+++.........      .....+||+.|+|||++.+           ..++.++|||||||+||+|++|+.||..
T Consensus       168 ~Dfg~~~~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~  241 (313)
T 3cek_A          168 IDFGIANQMQPDTTSV------VKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ  241 (313)
T ss_dssp             CCCSSSCC--------------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred             eeccccccccCccccc------cccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhh
Confidence            9999998765432211      1124569999999999876           4789999999999999999999999976


Q ss_pred             CCCCCchhhhhhhccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhHHHHh
Q 005221          363 YQGENKGFLVCKKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKLIYQV  442 (708)
Q Consensus       363 ~~~~~~~~~i~~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~~f~~  442 (708)
                      ......  .+...........++..+                     ...+.+||.+||..||.+||++.|+++||||+.
T Consensus       242 ~~~~~~--~~~~~~~~~~~~~~~~~~---------------------~~~l~~li~~~l~~dp~~Rps~~ell~h~~~~~  298 (313)
T 3cek_A          242 IINQIS--KLHAIIDPNHEIEFPDIP---------------------EKDLQDVLKCCLKRDPKQRISIPELLAHPYVQI  298 (313)
T ss_dssp             CCSHHH--HHHHHHCTTSCCCCCCCS---------------------CHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHC
T ss_pred             HHHHHH--HHHHHHhcccccCCcccc---------------------hHHHHHHHHHHccCCcccCcCHHHHhcCccccC
Confidence            432211  111110000000111111                     247889999999999999999999999999976


Q ss_pred             cc
Q 005221          443 GH  444 (708)
Q Consensus       443 ~~  444 (708)
                      ..
T Consensus       299 ~~  300 (313)
T 3cek_A          299 QT  300 (313)
T ss_dssp             C-
T ss_pred             CC
Confidence            43


No 170
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00  E-value=3.9e-41  Score=359.65  Aligned_cols=265  Identities=19%  Similarity=0.132  Sum_probs=202.0

Q ss_pred             CCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCCCCCCChHHHHHHHHcCCCCCccEEEEEee
Q 005221          138 SPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNTLGGSHGVPRVHFKGR  217 (708)
Q Consensus       138 ~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~~~~~~~~Ei~il~~L~h~~~v~~~~~~~~  217 (708)
                      ..+|+++++||+|+||.||+|++            .++.||||++...... .....+|+.+|.+|+|+|+|..+..+..
T Consensus        23 ~~~y~~~~~lg~G~~g~Vy~~~~------------~~~~vavK~~~~~~~~-~~~~~~E~~~l~~l~hpniv~~~~~~~~   89 (322)
T 3soc_A           23 SMPLQLLEVKARGRFGCVWKAQL------------LNEYVAVKIFPIQDKQ-SWQNEYEVYSLPGMKHENILQFIGAEKR   89 (322)
T ss_dssp             TEEEEEEEEEECSTTCEEEEEEE------------TTEEEEEEEECGGGHH-HHHHHHHHHTSTTCCCTTBCCEEEEEEE
T ss_pred             hhhchhhheecccCceEEEEEEE------------CCCEEEEEEeecCchH-HHHHHHHHHHHhcCCCCCchhhcceecc
Confidence            45899999999999999999987            4589999998754321 2234568889999999998888877765


Q ss_pred             e---CCEEEEEEecC-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC----------CceecCCCCCcEEeCCC
Q 005221          218 Q---GDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSK----------GYVHGDVKPENFLLGPP  283 (708)
Q Consensus       218 ~---~~~~~lvme~~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~----------gIvHrDIKP~NILl~~~  283 (708)
                      .   ...+++||||+ +++|.+++...  .+++..++.++.||+.||.|||++          |||||||||+|||++.+
T Consensus        90 ~~~~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~  167 (322)
T 3soc_A           90 GTSVDVDLWLITAFHEKGSLSDFLKAN--VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNN  167 (322)
T ss_dssp             ECSSSEEEEEEEECCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTT
T ss_pred             CCCCCceEEEEEecCCCCCHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCC
Confidence            4   34689999999 88999999774  499999999999999999999999          99999999999999887


Q ss_pred             CCCCCCcEEEeccCccccccCCCCCccccccCCCceeeccccccchhhhcCC-----CCCchhhHHHHHHHHHHHHhCCC
Q 005221          284 GTPDEKKLFLVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGR-----TGSRRDDLESLAYTLIFLLRGRL  358 (708)
Q Consensus       284 g~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~-----~~s~~~DIwSlGviL~eLltG~~  358 (708)
                      +     .+||+|||+++.........      .....+||+.|+|||++.+.     .++.++|||||||+||+|++|+.
T Consensus       168 ~-----~~kL~DFg~a~~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~  236 (322)
T 3soc_A          168 L-----TACIADFGLALKFEAGKSAG------DTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCT  236 (322)
T ss_dssp             C-----CEEECCCTTCEEECTTSCCC------CCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBT
T ss_pred             C-----eEEEccCCcccccccccCcc------ccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCC
Confidence            7     59999999998765543211      12235699999999999873     45678999999999999999999


Q ss_pred             CCCCCCCCCchhhhhhhccCCCCCCccCCCChHHHHHHHHHHcCCCCC--------cccHHHHHHHHHhhhCCCCCCCCc
Q 005221          359 PWQGYQGENKGFLVCKKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDE--------EPNYAKYISLFDGIVGPNPDIRPI  430 (708)
Q Consensus       359 Pf~~~~~~~~~~~i~~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~--------rP~~~~l~~LL~~mL~~dP~~Rps  430 (708)
                      ||.+................           .....+...........        ......+.+||.+||..||++|||
T Consensus       237 pf~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps  305 (322)
T 3soc_A          237 AADGPVDEYMLPFEEEIGQH-----------PSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLS  305 (322)
T ss_dssp             TSSSCCCCCCCTTHHHHCSS-----------CCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCC
T ss_pred             CCCCCcchhccchhhhhccC-----------CchhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcC
Confidence            99876543322111111100           01222222222211111        111345999999999999999999


Q ss_pred             chHHHHhHH
Q 005221          431 STEGAQKLI  439 (708)
Q Consensus       431 ~~e~l~h~~  439 (708)
                      +.|+++.+-
T Consensus       306 ~~ell~~L~  314 (322)
T 3soc_A          306 AGCVGERIT  314 (322)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            999998764


No 171
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00  E-value=6.3e-41  Score=357.90  Aligned_cols=260  Identities=20%  Similarity=0.220  Sum_probs=185.6

Q ss_pred             CCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCCCCCCChHHHHHHHHcC-CCCCccEEEEEe
Q 005221          138 SPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNTLG-GSHGVPRVHFKG  216 (708)
Q Consensus       138 ~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~~~~~~~~Ei~il~~L~-h~~~v~~~~~~~  216 (708)
                      ..+|++.+.||+|+||.||+|++..          +++.||||++..........+.+|+.++.++. |+|++..+..+.
T Consensus        27 ~~~y~~~~~lg~G~~g~V~~~~~~~----------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~   96 (337)
T 3ll6_A           27 ELRLRVRRVLAEGGFAFVYEAQDVG----------SGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAAS   96 (337)
T ss_dssp             TEEEEEEEEEECCSSEEEEEEEETT----------TCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEE
T ss_pred             CceEEEEEEEccCCceEEEEEEECC----------CCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhcccccc
Confidence            4589999999999999999999977          78999999987654443445778999999997 888777666553


Q ss_pred             -------eeCCEEEEEEecCCCCHHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHHhCC--ceecCCCCCcEEeCCCCC
Q 005221          217 -------RQGDYYVMVMDMLGPSLWDVWNN--NSHTMSIEMVACIAIEAISILEKMHSKG--YVHGDVKPENFLLGPPGT  285 (708)
Q Consensus       217 -------~~~~~~~lvme~~ggsL~~~l~~--~~~~l~~~~~~~i~~qil~aL~yLH~~g--IvHrDIKP~NILl~~~g~  285 (708)
                             .....++++||+++|+|.+++..  ....+++..++.|+.||+.||.|||++|  |+||||||+||||+.++ 
T Consensus        97 ~~~~~~~~~~~~~~lv~e~~~g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl~~~~~-  175 (337)
T 3ll6_A           97 IGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQG-  175 (337)
T ss_dssp             ECTTTSTTSSEEEEEEEECCSEEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCEECTTS-
T ss_pred             ccccccccCCceEEEEEEecCCCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCCcccEEECCCC-
Confidence                   45567999999999999999865  3446999999999999999999999999  99999999999999877 


Q ss_pred             CCCCcEEEeccCccccccCCCCCcccc----ccCCCceeeccccccchhhh---cCCCCCchhhHHHHHHHHHHHHhCCC
Q 005221          286 PDEKKLFLVDLGLATKWRDSTTGMHVE----YDQRPDVFRGTVRYASVHAH---LGRTGSRRDDLESLAYTLIFLLRGRL  358 (708)
Q Consensus       286 ~~~~~vkL~DFGla~~~~~~~~~~~~~----~~~~~~~~~GT~~Y~APE~~---~~~~~s~~~DIwSlGviL~eLltG~~  358 (708)
                          .+||+|||+++............    ........+||+.|+|||++   .+..++.++|||||||+||+|++|+.
T Consensus       176 ----~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~  251 (337)
T 3ll6_A          176 ----TIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQH  251 (337)
T ss_dssp             ----CEEBCCCTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSC
T ss_pred             ----CEEEecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCC
Confidence                59999999998766543211000    00111245699999999998   56778999999999999999999999


Q ss_pred             CCCCCCCCCchhhhhhhccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhH
Q 005221          359 PWQGYQGENKGFLVCKKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKL  438 (708)
Q Consensus       359 Pf~~~~~~~~~~~i~~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~  438 (708)
                      ||.+......    ........+                        .......+.+||.+||..||.+||++.|+++++
T Consensus       252 p~~~~~~~~~----~~~~~~~~~------------------------~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l  303 (337)
T 3ll6_A          252 PFEDGAKLRI----VNGKYSIPP------------------------HDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQL  303 (337)
T ss_dssp             CC----------------CCCCT------------------------TCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHH
T ss_pred             CCcchhHHHh----hcCcccCCc------------------------ccccchHHHHHHHHHccCChhhCcCHHHHHHHH
Confidence            9976433221    111111110                        001123578899999999999999999999997


Q ss_pred             HH
Q 005221          439 IY  440 (708)
Q Consensus       439 ~f  440 (708)
                      .-
T Consensus       304 ~~  305 (337)
T 3ll6_A          304 QE  305 (337)
T ss_dssp             HH
T ss_pred             HH
Confidence            64


No 172
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00  E-value=4.2e-41  Score=353.46  Aligned_cols=265  Identities=16%  Similarity=0.137  Sum_probs=195.8

Q ss_pred             CCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCCCCCCChHHHHHHHHcCCCCCccEEEEEee-
Q 005221          139 PMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNTLGGSHGVPRVHFKGR-  217 (708)
Q Consensus       139 ~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~~~~~~~~Ei~il~~L~h~~~v~~~~~~~~-  217 (708)
                      ++|++++.||+|+||.||+|++..          +++.||||++..... ....+.+|+.+++.++|+|++..+..+.. 
T Consensus         6 ~~y~~~~~lg~G~~g~V~~~~~~~----------~~~~vaiK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~   74 (303)
T 1zy4_A            6 SDFEEIAVLGQGAFGQVVKARNAL----------DSRYYAIKKIRHTEE-KLSTILSEVMLLASLNHQYVVRYYAAWLER   74 (303)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETT----------TCCEEEEEEEEEEHH-HHHHHHHHHHHHTTCCCTTBCCEEEEEEEC
T ss_pred             ccchhhheeccCCcEEEEEEEEcC----------CCeEEEEEEEeccHH-HHHHHHHHHHHHHhcCchHHHHHHHHHHhh
Confidence            369999999999999999999977          789999999865422 12356789999999999998887766543 


Q ss_pred             -----------eCCEEEEEEecC-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCC
Q 005221          218 -----------QGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGT  285 (708)
Q Consensus       218 -----------~~~~~~lvme~~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~  285 (708)
                                 ....+++|||++ +++|.+++...+..+++..++.++.||+.||.|||++||+||||||+|||++.++ 
T Consensus        75 ~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dlkp~Nil~~~~~-  153 (303)
T 1zy4_A           75 RNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESR-  153 (303)
T ss_dssp             CCCCC------CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTS-
T ss_pred             cchhhhhcccccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHHhCCeecccCCHHhEEEcCCC-
Confidence                       356899999999 8899999987766789999999999999999999999999999999999998877 


Q ss_pred             CCCCcEEEeccCccccccCCCCCccc------cccCCCceeeccccccchhhhcCC-CCCchhhHHHHHHHHHHHHhCCC
Q 005221          286 PDEKKLFLVDLGLATKWRDSTTGMHV------EYDQRPDVFRGTVRYASVHAHLGR-TGSRRDDLESLAYTLIFLLRGRL  358 (708)
Q Consensus       286 ~~~~~vkL~DFGla~~~~~~~~~~~~------~~~~~~~~~~GT~~Y~APE~~~~~-~~s~~~DIwSlGviL~eLltG~~  358 (708)
                          .+||+|||+++...........      .........+||+.|+|||++.+. .++.++|||||||++|+|++   
T Consensus       154 ----~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---  226 (303)
T 1zy4_A          154 ----NVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---  226 (303)
T ss_dssp             ----CEEECCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---
T ss_pred             ----CEEEeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---
Confidence                5999999999876543210000      001122346799999999999875 68999999999999999998   


Q ss_pred             CCCCCCCCCchhhhhhhccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhH
Q 005221          359 PWQGYQGENKGFLVCKKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKL  438 (708)
Q Consensus       359 Pf~~~~~~~~~~~i~~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~  438 (708)
                      ||....................+..+....                     ...+.+||.+||..||.+|||+.++++||
T Consensus       227 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~li~~~l~~dp~~Rps~~~ll~h~  285 (303)
T 1zy4_A          227 PFSTGMERVNILKKLRSVSIEFPPDFDDNK---------------------MKVEKKIIRLLIDHDPNKRPGARTLLNSG  285 (303)
T ss_dssp             CCSSHHHHHHHHHHHHSTTCCCCTTCCTTT---------------------SHHHHHHHHHHTCSSGGGSCCHHHHHHSS
T ss_pred             ccCCchhHHHHHHhccccccccCccccccc---------------------hHHHHHHHHHHHhcCcccCcCHHHHhCCC
Confidence            554321111111111111111111111111                     14678999999999999999999999999


Q ss_pred             HHHhc
Q 005221          439 IYQVG  443 (708)
Q Consensus       439 ~f~~~  443 (708)
                      ||...
T Consensus       286 ~~~~~  290 (303)
T 1zy4_A          286 WLPVK  290 (303)
T ss_dssp             CSCCC
T ss_pred             CcCCC
Confidence            98643


No 173
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00  E-value=1.8e-40  Score=358.82  Aligned_cols=277  Identities=22%  Similarity=0.320  Sum_probs=199.6

Q ss_pred             CCCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCCCCCCChHHHHHHHHcCCCCCcc------
Q 005221          137 GSPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNTLGGSHGVP------  210 (708)
Q Consensus       137 ~~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~~~~~~~~Ei~il~~L~h~~~v~------  210 (708)
                      ..++|++.+.||+|+||.||+|++..+..  ......++.||||++...     ..+.+|+.++++|+|+|+|.      
T Consensus        40 ~~~~y~~~~~lg~G~~g~Vy~~~~~~t~~--~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~  112 (352)
T 2jii_A           40 SGRQWKLKSFQTRDNQGILYEAAPTSTLT--CDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLY  112 (352)
T ss_dssp             TSCEEEEEEEEEEETTEEEEEEEECC-------------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHT
T ss_pred             cCCeEEEEEEecCCCCeEEEEEeecCCcc--ccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhc
Confidence            35689999999999999999999865100  011113789999998754     46789999999999987654      


Q ss_pred             ---------EEEEEeeeCCEEEEEEecCCCCHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEe
Q 005221          211 ---------RVHFKGRQGDYYVMVMDMLGPSLWDVWNNN-SHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLL  280 (708)
Q Consensus       211 ---------~~~~~~~~~~~~~lvme~~ggsL~~~l~~~-~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl  280 (708)
                               .+......+..++|||||++++|.+++... ...+++..++.|+.||+.||.|||++||+||||||+|||+
T Consensus       113 ~~~~~~i~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIl~  192 (352)
T 2jii_A          113 STPLLAIPTCMGFGVHQDKYRFLVLPSLGRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENEYVHGNVTAENIFV  192 (352)
T ss_dssp             TCTTCSCCCCCEEEEETTTEEEEEEECCCEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCGGGEEE
T ss_pred             cCCccCccchhhccccCCcEEEEEecCCCcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEE
Confidence                     233343447899999999999999999875 3479999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCcEEEeccCccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCC
Q 005221          281 GPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPW  360 (708)
Q Consensus       281 ~~~g~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLltG~~Pf  360 (708)
                      +.++.   ..+||+|||+++.+.......... ........||+.|+|||++.+..++.++|||||||+||+|++|+.||
T Consensus       193 ~~~~~---~~~kl~Dfg~a~~~~~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf  268 (352)
T 2jii_A          193 DPEDQ---SQVTLAGYGFAFRYCPSGKHVAYV-EGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPW  268 (352)
T ss_dssp             ETTEE---EEEEECCGGGCBCSSGGGCCCCCC-TTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTT
T ss_pred             cCCCC---ceEEEecCcceeeccCCCcccccc-ccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCc
Confidence            86641   259999999998765432211100 11122357999999999999999999999999999999999999999


Q ss_pred             CCCCCCCchhhhhhhccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhHH
Q 005221          361 QGYQGENKGFLVCKKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKLI  439 (708)
Q Consensus       361 ~~~~~~~~~~~i~~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~~  439 (708)
                      .+..................+..+...+.               ....-...+.+||.+||..||++||++.++++.+-
T Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~  332 (352)
T 2jii_A          269 TNCLPNTEDIMKQKQKFVDKPGPFVGPCG---------------HWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLE  332 (352)
T ss_dssp             GGGTTCHHHHHHHHHHHHHSCCCEECTTS---------------CEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHH
T ss_pred             ccCCcCHHHHHHHHHhccCChhhhhhhcc---------------ccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHH
Confidence            87643222111111111111111111000               00000257788888888888888888888877653


No 174
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00  E-value=8.2e-41  Score=356.30  Aligned_cols=262  Identities=16%  Similarity=0.184  Sum_probs=183.9

Q ss_pred             CCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCC--CCCCCCChHHHHHHHHcCCCCCccEEEEE
Q 005221          138 SPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSS--KGCNYGPPYEWQVYNTLGGSHGVPRVHFK  215 (708)
Q Consensus       138 ~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~--~~~~~~~~~Ei~il~~L~h~~~v~~~~~~  215 (708)
                      .++|++++.||+|+||.||+|++...       +.....||||++....  ......+.+|+.+++.|+|+|++..+..+
T Consensus        22 ~~~y~~~~~lg~G~~g~Vy~~~~~~~-------~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~   94 (323)
T 3qup_A           22 EQQFTLGRMLGKGEFGSVREAQLKQE-------DGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVS   94 (323)
T ss_dssp             ---CEEEEEEEEETTEEEEEEEC--------------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEE
T ss_pred             hhHeEEeceecccCCeEEEEEEEccc-------CCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhcee
Confidence            45799999999999999999998661       0112389999987642  22234577899999999999977777665


Q ss_pred             eeeCC-----EEEEEEecC-CCCHHHHHhccC-----CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCC
Q 005221          216 GRQGD-----YYVMVMDML-GPSLWDVWNNNS-----HTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPG  284 (708)
Q Consensus       216 ~~~~~-----~~~lvme~~-ggsL~~~l~~~~-----~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g  284 (708)
                      .....     ..++||||+ +++|.+++....     ..+++..++.++.||+.||.|||++||+||||||+|||++.++
T Consensus        95 ~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~Dikp~NIli~~~~  174 (323)
T 3qup_A           95 LRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDM  174 (323)
T ss_dssp             ECC-------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTS
T ss_pred             eccccccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCCcccCCCCcceEEEcCCC
Confidence            43322     248999999 889999986432     2599999999999999999999999999999999999998877


Q ss_pred             CCCCCcEEEeccCccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCC
Q 005221          285 TPDEKKLFLVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLR-GRLPWQGY  363 (708)
Q Consensus       285 ~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLlt-G~~Pf~~~  363 (708)
                           .+||+|||+++.........      ......+|+.|+|||++.+..++.++|||||||++|+|++ |++||.+.
T Consensus       175 -----~~kl~Dfg~a~~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~  243 (323)
T 3qup_A          175 -----TVCVADFGLSRKIYSGDYYR------QGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGI  243 (323)
T ss_dssp             -----CEEECCCCC-----------------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred             -----CEEEeecccccccccccccc------ccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCcccc
Confidence                 59999999998765432211      1123447889999999999999999999999999999999 99999986


Q ss_pred             CCCCchhhhhhhccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCc-------chHHHH
Q 005221          364 QGENKGFLVCKKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPI-------STEGAQ  436 (708)
Q Consensus       364 ~~~~~~~~i~~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps-------~~e~l~  436 (708)
                      ........+........+    ..++                     ..+.+||.+||..||++|||       ..+++.
T Consensus       244 ~~~~~~~~~~~~~~~~~~----~~~~---------------------~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~  298 (323)
T 3qup_A          244 ENAEIYNYLIGGNRLKQP----PECM---------------------EEVYDLMYQCWSADPKQRPSFTCLRMELENILG  298 (323)
T ss_dssp             CGGGHHHHHHTTCCCCCC----TTCC---------------------HHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             ChHHHHHHHhcCCCCCCC----CccC---------------------HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence            655443333332211111    1122                     46788899999999999999       555666


Q ss_pred             hHHHHh
Q 005221          437 KLIYQV  442 (708)
Q Consensus       437 h~~f~~  442 (708)
                      |+|+..
T Consensus       299 ~~~~~~  304 (323)
T 3qup_A          299 HLSVLS  304 (323)
T ss_dssp             C-----
T ss_pred             HhhhcC
Confidence            676543


No 175
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00  E-value=1.2e-40  Score=348.06  Aligned_cols=256  Identities=20%  Similarity=0.197  Sum_probs=191.6

Q ss_pred             CCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCC-CCCCCChHHHHHHHHcCCCCCccEEEEEe
Q 005221          138 SPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSK-GCNYGPPYEWQVYNTLGGSHGVPRVHFKG  216 (708)
Q Consensus       138 ~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~-~~~~~~~~Ei~il~~L~h~~~v~~~~~~~  216 (708)
                      .++|++.+.||+|+||.||+|++...       ...+..||+|++..... .....+.+|+.+++.++|+|++..+..+ 
T Consensus        14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~-------~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~-   85 (281)
T 1mp8_A           14 RERIELGRCIGEGQFGDVHQGIYMSP-------ENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-   85 (281)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEECCC---------CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEE-
T ss_pred             hHHeEEEeEeeecCCeeEEEEEEecC-------CCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEE-
Confidence            34799999999999999999998651       11456899999875422 1233577899999999999977777665 


Q ss_pred             eeCCEEEEEEecC-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcEEEec
Q 005221          217 RQGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVD  295 (708)
Q Consensus       217 ~~~~~~~lvme~~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~vkL~D  295 (708)
                       .++.+++|||++ +++|.+++......+++..++.++.||+.||.|||++||+||||||+|||++.++     .+||+|
T Consensus        86 -~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~-----~~kl~D  159 (281)
T 1mp8_A           86 -TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSND-----CVKLGD  159 (281)
T ss_dssp             -CSSSCEEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETT-----EEEECC
T ss_pred             -ccCccEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHEEECCCC-----CEEECc
Confidence             345678999999 7899999987766799999999999999999999999999999999999998776     699999


Q ss_pred             cCccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCCchhhhhh
Q 005221          296 LGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLR-GRLPWQGYQGENKGFLVCK  374 (708)
Q Consensus       296 FGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLlt-G~~Pf~~~~~~~~~~~i~~  374 (708)
                      ||+++.........       .....+|+.|+|||++.+..++.++|||||||++|+|++ |.+||.+....+....+..
T Consensus       160 fg~~~~~~~~~~~~-------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~~~~i~~  232 (281)
T 1mp8_A          160 FGLSRYMEDSTYYK-------ASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIEN  232 (281)
T ss_dssp             --------------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHT
T ss_pred             cccccccCcccccc-------cccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHHHHHHHc
Confidence            99998765432211       123447889999999999999999999999999999996 9999998665544433333


Q ss_pred             hccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhHH
Q 005221          375 KKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKLI  439 (708)
Q Consensus       375 ~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~~  439 (708)
                      .....    ++..+|                     ..+.+||.+||..||++|||+.++++++.
T Consensus       233 ~~~~~----~~~~~~---------------------~~l~~li~~~l~~~p~~Rps~~~l~~~l~  272 (281)
T 1mp8_A          233 GERLP----MPPNCP---------------------PTLYSLMTKCWAYDPSRRPRFTELKAQLS  272 (281)
T ss_dssp             TCCCC----CCTTCC---------------------HHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             CCCCC----CCCCCC---------------------HHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence            22211    122233                     36678888888888888888888887754


No 176
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00  E-value=4.7e-41  Score=358.34  Aligned_cols=272  Identities=20%  Similarity=0.165  Sum_probs=206.5

Q ss_pred             CCCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCCCCCCChHHHHHHHHcCCCCCccEEEEEe
Q 005221          137 GSPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNTLGGSHGVPRVHFKG  216 (708)
Q Consensus       137 ~~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~~~~~~~~Ei~il~~L~h~~~v~~~~~~~  216 (708)
                      ..++|++.+.||+|+||.||+|++.           ++..||||++..........+.+|+.+++.++|+|++..+.. +
T Consensus        37 ~~~~y~~~~~lg~G~~g~Vy~~~~~-----------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~-~  104 (321)
T 2qkw_B           37 ATNNFDHKFLIGHGVFGKVYKGVLR-----------DGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGF-C  104 (321)
T ss_dssp             CCCCCSCCCCSCBCSSSEEEEEECT-----------TCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEE-C
T ss_pred             HHhccCccceeecCCCeeEEEEEEC-----------CCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEE-E
Confidence            4568999999999999999999863           478999999876654444567889999999999886665554 4


Q ss_pred             eeCCEEEEEEecC-CCCHHHHHhccC---CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcEE
Q 005221          217 RQGDYYVMVMDML-GPSLWDVWNNNS---HTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLF  292 (708)
Q Consensus       217 ~~~~~~~lvme~~-ggsL~~~l~~~~---~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~vk  292 (708)
                      ...+.+++||||+ +++|.+++....   ..+++..++.++.||+.||.|||++||+||||||+|||++.++     .+|
T Consensus       105 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~-----~~k  179 (321)
T 2qkw_B          105 DERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDENF-----VPK  179 (321)
T ss_dssp             CCTTCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCSTTEEECTTC-----CEE
T ss_pred             cCCCeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCCeecCCCCHHHEEECCCC-----CEE
Confidence            6677899999999 889999986543   3599999999999999999999999999999999999998777     599


Q ss_pred             EeccCccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCchhhh
Q 005221          293 LVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLV  372 (708)
Q Consensus       293 L~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLltG~~Pf~~~~~~~~~~~i  372 (708)
                      |+|||+++.........      ......||+.|+|||++.+..++.++|||||||+||+|++|+.||.+....+.....
T Consensus       180 l~Dfg~~~~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~  253 (321)
T 2qkw_B          180 ITDFGISKKGTELDQTH------LSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLA  253 (321)
T ss_dssp             ECCCTTCEECSSSSCCC------CBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHH
T ss_pred             Eeecccccccccccccc------cccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHH
Confidence            99999998654322111      122456999999999999999999999999999999999999999876554432222


Q ss_pred             hhhccCCCCCCccCCCChHHHHHHHHHHcCCCCCcc-cHHHHHHHHHhhhCCCCCCCCcchHHHHhHHHH
Q 005221          373 CKKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEP-NYAKYISLFDGIVGPNPDIRPISTEGAQKLIYQ  441 (708)
Q Consensus       373 ~~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP-~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~~f~  441 (708)
                      ...........+.......          ......+ ....+.+++.+||..||++|||+.|+++++...
T Consensus       254 ~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~  313 (321)
T 2qkw_B          254 EWAVESHNNGQLEQIVDPN----------LADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYA  313 (321)
T ss_dssp             HHTHHHHTTTCCCSSSSSS----------CTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHhhhccccccHHHhcChh----------hccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHH
Confidence            1110000000000000000          0000111 125789999999999999999999999998644


No 177
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00  E-value=1.2e-40  Score=370.76  Aligned_cols=263  Identities=16%  Similarity=0.188  Sum_probs=195.9

Q ss_pred             CCCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCCCCCCChHHHHHHHHc-CCCCCccEEEEE
Q 005221          137 GSPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNTL-GGSHGVPRVHFK  215 (708)
Q Consensus       137 ~~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~~~~~~~~Ei~il~~L-~h~~~v~~~~~~  215 (708)
                      +..+|.+.+.||+|+||+|+.. ...          +++.||||++....   .....+|+++|+.+ +|+|+|.. ...
T Consensus        22 ~~~~y~~~~~LG~G~~G~V~~~-~~~----------~~~~vAvK~~~~~~---~~~~~~E~~~l~~l~~HpnIv~l-~~~   86 (432)
T 3p23_A           22 GKISFCPKDVLGHGAEGTIVYR-GMF----------DNRDVAVKRILPEC---FSFADREVQLLRESDEHPNVIRY-FCT   86 (432)
T ss_dssp             TTEEEEEEEEEEECGGGCEEEE-EES----------SSSEEEEEEECTTT---EEECHHHHHHHHHSCCCTTBCCE-EEE
T ss_pred             ccEEEecCCeeecCcCEEEEEE-EEe----------CCeEEEEEEECHHH---HHHHHHHHHHHHhccCCCCcCeE-EEE
Confidence            4457999999999999997643 333          57899999986542   23467899999999 67775554 555


Q ss_pred             eeeCCEEEEEEecCCCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcEEEec
Q 005221          216 GRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVD  295 (708)
Q Consensus       216 ~~~~~~~~lvme~~ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~vkL~D  295 (708)
                      ..+...+|||||+++++|.+++......+++..+..++.||+.||.|||++|||||||||+||||+.++......+||+|
T Consensus        87 ~~~~~~~~lv~E~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NIll~~~~~~~~~~~kL~D  166 (432)
T 3p23_A           87 EKDRQFQYIAIELCAATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISD  166 (432)
T ss_dssp             EEETTEEEEEEECCSEEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHHHTTCCCCCCSTTSEEECCCBTTTBCCEEECC
T ss_pred             EecCCEEEEEEECCCCCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHCcCEeCCCCHHHEEEecCCCCCceeEEEec
Confidence            67888999999999999999998876667777788999999999999999999999999999999765544455799999


Q ss_pred             cCccccccCCCCCccccccCCCceeeccccccchhhhc---CCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCCchhh
Q 005221          296 LGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHL---GRTGSRRDDLESLAYTLIFLLR-GRLPWQGYQGENKGFL  371 (708)
Q Consensus       296 FGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~---~~~~s~~~DIwSlGviL~eLlt-G~~Pf~~~~~~~~~~~  371 (708)
                      ||+|+.+.......     ......+||+.|+|||++.   +..++.++|||||||+||+|++ |.+||........  .
T Consensus       167 FG~a~~~~~~~~~~-----~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~--~  239 (432)
T 3p23_A          167 FGLCKKLAVGRHSF-----SRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQA--N  239 (432)
T ss_dssp             TTEEECC-----------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHH--H
T ss_pred             ccceeeccCCCcce-----eeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHH--H
Confidence            99998765432211     1123467999999999998   4567889999999999999999 9999965332211  1


Q ss_pred             hhhhccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhHHHHh
Q 005221          372 VCKKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKLIYQV  442 (708)
Q Consensus       372 i~~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~~f~~  442 (708)
                      +......  ...   ..+                .......+.+||.+||..||.+|||+.|+++||||..
T Consensus       240 ~~~~~~~--~~~---~~~----------------~~~~~~~~~~li~~~L~~dP~~Rps~~evl~hp~f~~  289 (432)
T 3p23_A          240 ILLGACS--LDC---LHP----------------EKHEDVIARELIEKMIAMDPQKRPSAKHVLKHPFFWS  289 (432)
T ss_dssp             HHTTCCC--CTT---SCT----------------TCHHHHHHHHHHHHHSCSSGGGSCCHHHHHTSTTTCC
T ss_pred             HHhccCC--ccc---cCc----------------cccccHHHHHHHHHHHhCCHhhCCCHHHHHhCccccC
Confidence            1111100  000   000                0011235789999999999999999999999999854


No 178
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00  E-value=7.8e-41  Score=351.85  Aligned_cols=274  Identities=16%  Similarity=0.109  Sum_probs=200.3

Q ss_pred             CCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCCCCCCChHHHHHHHHcCCCCCccEEEEEee
Q 005221          138 SPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNTLGGSHGVPRVHFKGR  217 (708)
Q Consensus       138 ~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~~~~~~~~Ei~il~~L~h~~~v~~~~~~~~  217 (708)
                      .++|+++++||+|+||.||+|++...      ...+++.||||++..........+.+|+.+|+.|+|+|++..+..+..
T Consensus         9 ~~~~~~~~~lg~G~~g~V~~~~~~~~------~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~   82 (295)
T 3ugc_A            9 ERHLKFLQQLGKGNFGSVEMCRYDPL------QDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYS   82 (295)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEECTT------CSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECH
T ss_pred             HHHhhhhheeeccCCEEEEEEEEecc------cCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec
Confidence            35799999999999999999985320      112689999999876544334457889999999999998887776643


Q ss_pred             -eCCEEEEEEecC-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcEEEec
Q 005221          218 -QGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVD  295 (708)
Q Consensus       218 -~~~~~~lvme~~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~vkL~D  295 (708)
                       ....+++||||+ +++|.+++......+++..++.++.||+.||.|||++||+||||||+|||++.++     .+||+|
T Consensus        83 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~-----~~kl~D  157 (295)
T 3ugc_A           83 AGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENEN-----RVKIGD  157 (295)
T ss_dssp             HHHTSCEEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETT-----EEEECC
T ss_pred             CCCCceEEEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHhhEEEcCCC-----eEEEcc
Confidence             345689999999 8999999988766799999999999999999999999999999999999998777     699999


Q ss_pred             cCccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhh
Q 005221          296 LGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCKK  375 (708)
Q Consensus       296 FGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLltG~~Pf~~~~~~~~~~~i~~~  375 (708)
                      ||+++..........     ......||+.|+|||++.+..++.++|||||||++|+|++|..||.......     ...
T Consensus       158 fg~~~~~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~-----~~~  227 (295)
T 3ugc_A          158 FGLTKVLPQDKEFFK-----VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEF-----MRM  227 (295)
T ss_dssp             CCSCC------------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHH-----HHH
T ss_pred             CcccccccCCcceee-----eccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHH-----Hhh
Confidence            999987654322111     1123447888999999999999999999999999999999999987532110     000


Q ss_pred             ccCCCCCCccCCCChHHHHHHHHHHcCCCCCccc--HHHHHHHHHhhhCCCCCCCCcchHHHHhH
Q 005221          376 KMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPN--YAKYISLFDGIVGPNPDIRPISTEGAQKL  438 (708)
Q Consensus       376 ~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~--~~~l~~LL~~mL~~dP~~Rps~~e~l~h~  438 (708)
                       ....+.     .......+...+........|.  ...+.+||.+||..||++|||+.|+++.+
T Consensus       228 -~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L  286 (295)
T 3ugc_A          228 -IGNDKQ-----GQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRV  286 (295)
T ss_dssp             -HCTTCC-----THHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHH
T ss_pred             -hcCccc-----cchhHHHHHHHHhccCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHH
Confidence             000000     0011112222222222222221  25788899999999999999999988765


No 179
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00  E-value=1.8e-40  Score=348.21  Aligned_cols=257  Identities=20%  Similarity=0.236  Sum_probs=198.4

Q ss_pred             eEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCCCCCCChHHHHHHHHcCCCCCccEEEEEeeeCC
Q 005221          141 YRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNTLGGSHGVPRVHFKGRQGD  220 (708)
Q Consensus       141 Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~~~~~~~~Ei~il~~L~h~~~v~~~~~~~~~~~  220 (708)
                      |.....||+|+||.||+|++..          +++.||||++..........+.+|+.+++.++|+|++..+.. ....+
T Consensus        24 ~~~~~~lg~G~~g~Vy~~~~~~----------~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~-~~~~~   92 (295)
T 2clq_A           24 NGDRVVLGKGTYGIVYAGRDLS----------NQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGS-FSENG   92 (295)
T ss_dssp             TSSBCEEEECSSSEEEEEEETT----------TCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEE-EEETT
T ss_pred             CCCcEEEeecCcEEEEEEEECC----------CCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeE-EEeCC
Confidence            4444589999999999999977          789999999987655445567889999999999987665554 46778


Q ss_pred             EEEEEEecC-CCCHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCC-CCCCCCCcEEEecc
Q 005221          221 YYVMVMDML-GPSLWDVWNNNS--HTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGP-PGTPDEKKLFLVDL  296 (708)
Q Consensus       221 ~~~lvme~~-ggsL~~~l~~~~--~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~-~g~~~~~~vkL~DF  296 (708)
                      .+++|||++ +++|.+++....  ..+++..++.++.||+.||.|||++||+||||||+|||++. ++     .+||+||
T Consensus        93 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~-----~~kl~Df  167 (295)
T 2clq_A           93 FIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSG-----VLKISDF  167 (295)
T ss_dssp             EEEEEEECCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTC-----CEEECCT
T ss_pred             cEEEEEEeCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCCEEccCCChhhEEEECCCC-----CEEEeec
Confidence            899999999 899999998653  24679999999999999999999999999999999999986 44     6999999


Q ss_pred             CccccccCCCCCccccccCCCceeeccccccchhhhcCCC--CCchhhHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhh
Q 005221          297 GLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRT--GSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCK  374 (708)
Q Consensus       297 Gla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~--~s~~~DIwSlGviL~eLltG~~Pf~~~~~~~~~~~i~~  374 (708)
                      |+++........        .....||+.|+|||++.+..  ++.++|||||||++|+|++|+.||..........  ..
T Consensus       168 g~~~~~~~~~~~--------~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~--~~  237 (295)
T 2clq_A          168 GTSKRLAGINPC--------TETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAM--FK  237 (295)
T ss_dssp             TTCEESCC-------------CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHH--HH
T ss_pred             ccccccCCCCCc--------ccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHH--Hh
Confidence            999876543211        12356999999999997654  8999999999999999999999997643221111  11


Q ss_pred             hccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhHHHHhcc
Q 005221          375 KKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKLIYQVGH  444 (708)
Q Consensus       375 ~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~~f~~~~  444 (708)
                      .........++..++                     ..+.+||.+||..||++||++.++++|+||....
T Consensus       238 ~~~~~~~~~~~~~~~---------------------~~~~~li~~~l~~dp~~Rps~~~ll~~~~~~~~~  286 (295)
T 2clq_A          238 VGMFKVHPEIPESMS---------------------AEAKAFILKCFEPDPDKRACANDLLVDEFLKVSS  286 (295)
T ss_dssp             HHHHCCCCCCCTTSC---------------------HHHHHHHHHTTCSSTTTSCCHHHHHTSGGGCC--
T ss_pred             hccccccccccccCC---------------------HHHHHHHHHHccCChhhCCCHHHHhcChhhhhcc
Confidence            000001111111121                     4788999999999999999999999999987554


No 180
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00  E-value=4.2e-41  Score=352.32  Aligned_cols=258  Identities=18%  Similarity=0.179  Sum_probs=197.1

Q ss_pred             CCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCCCCCCChHHHHHHHHcCCCCCccEEEEEee
Q 005221          138 SPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNTLGGSHGVPRVHFKGR  217 (708)
Q Consensus       138 ~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~~~~~~~~Ei~il~~L~h~~~v~~~~~~~~  217 (708)
                      .++|++.+.||+|+||.||+|++.....   .....+..||+|++..........+.+|+.+++.|+|+|++..+..+ .
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~---~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~   82 (289)
T 4fvq_A            7 NEDLIFNESLGQGTFTKIFKGVRREVGD---YGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVC-V   82 (289)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEEEEECG---GGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEE-C
T ss_pred             hhHeeeeeeeccCCCceEEEEEEecccc---cccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEE-E
Confidence            3579999999999999999999876100   00001257999999766544455678899999999999877665554 5


Q ss_pred             eCCEEEEEEecC-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCC---CCCcEEE
Q 005221          218 QGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTP---DEKKLFL  293 (708)
Q Consensus       218 ~~~~~~lvme~~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~---~~~~vkL  293 (708)
                      .++..++||||+ +++|.+++......+++..++.++.||+.||.|||++||+||||||+|||++.++..   +...+||
T Consensus        83 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl  162 (289)
T 4fvq_A           83 CGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKL  162 (289)
T ss_dssp             CTTCCEEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEEECCBGGGTBCCEEEE
T ss_pred             eCCCCEEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHhhCCeECCCcCcceEEEecCCcccccccceeee
Confidence            667789999999 799999998876669999999999999999999999999999999999999877631   1123999


Q ss_pred             eccCccccccCCCCCccccccCCCceeeccccccchhhhcC-CCCCchhhHHHHHHHHHHHHhC-CCCCCCCCCCCchhh
Q 005221          294 VDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLG-RTGSRRDDLESLAYTLIFLLRG-RLPWQGYQGENKGFL  371 (708)
Q Consensus       294 ~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~-~~~s~~~DIwSlGviL~eLltG-~~Pf~~~~~~~~~~~  371 (708)
                      +|||++......            ....||+.|+|||++.+ ..++.++|||||||++|+|++| .+||........ ..
T Consensus       163 ~Dfg~~~~~~~~------------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~-~~  229 (289)
T 4fvq_A          163 SDPGISITVLPK------------DILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRK-LQ  229 (289)
T ss_dssp             CCCCSCTTTSCH------------HHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHH-HH
T ss_pred             ccCcccccccCc------------cccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHH-HH
Confidence            999999754332            13458999999999988 7799999999999999999995 555554322211 11


Q ss_pred             hhhhccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhH
Q 005221          372 VCKKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKL  438 (708)
Q Consensus       372 i~~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~  438 (708)
                      ......     .++...                     ...+.+||.+||..||.+|||+.+++++.
T Consensus       230 ~~~~~~-----~~~~~~---------------------~~~l~~li~~~l~~dp~~Rps~~~ll~~l  270 (289)
T 4fvq_A          230 FYEDRH-----QLPAPK---------------------AAELANLINNCMDYEPDHRPSFRAIIRDL  270 (289)
T ss_dssp             HHHTTC-----CCCCCS---------------------SCTTHHHHHHHSCSSGGGSCCHHHHHHHH
T ss_pred             HhhccC-----CCCCCC---------------------CHHHHHHHHHHcCCChhHCcCHHHHHHHH
Confidence            111110     011111                     23578889999999999999999998885


No 181
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00  E-value=1.9e-40  Score=348.27  Aligned_cols=254  Identities=18%  Similarity=0.261  Sum_probs=183.9

Q ss_pred             CCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCC--CCCCChHHHHHHHHcCCCCCccEEEEE
Q 005221          138 SPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKG--CNYGPPYEWQVYNTLGGSHGVPRVHFK  215 (708)
Q Consensus       138 ~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~--~~~~~~~Ei~il~~L~h~~~v~~~~~~  215 (708)
                      .++|++.++||+|+||.||+|++..             .||+|++......  ....+.+|+.+|+.++|+|++..+.+ 
T Consensus        23 ~~~y~~~~~lG~G~~g~Vy~~~~~~-------------~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~-   88 (289)
T 3og7_A           23 DGQITVGQRIGSGSFGTVYKGKWHG-------------DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY-   88 (289)
T ss_dssp             TTSCEEEEEEEECSSEEEEEEESSS-------------EEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEE-
T ss_pred             ccceeeeeEecCCCCeEEEEEEEcC-------------ceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEee-
Confidence            3579999999999999999998633             5999998755321  22346789999999999998876663 


Q ss_pred             eeeCCEEEEEEecC-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcEEEe
Q 005221          216 GRQGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLV  294 (708)
Q Consensus       216 ~~~~~~~~lvme~~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~vkL~  294 (708)
                       .....+++|||++ +++|.+++......+++..++.++.||+.||.|||++||+||||||+|||++.++     .+||+
T Consensus        89 -~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~Dlkp~Nil~~~~~-----~~kl~  162 (289)
T 3og7_A           89 -STAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDN-----TVKIG  162 (289)
T ss_dssp             -ECSSSCEEEEECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTT-----EEEEC
T ss_pred             -ccCCccEEEEEecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEECCCC-----CEEEc
Confidence             3455688999999 8999999987767899999999999999999999999999999999999998877     69999


Q ss_pred             ccCccccccCCCCCccccccCCCceeeccccccchhhhc---CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCchhh
Q 005221          295 DLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHL---GRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFL  371 (708)
Q Consensus       295 DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~---~~~~s~~~DIwSlGviL~eLltG~~Pf~~~~~~~~~~~  371 (708)
                      |||+++.........      ......||+.|+|||++.   +..++.++|||||||++|+|++|+.||.+....+....
T Consensus       163 Dfg~~~~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~  236 (289)
T 3og7_A          163 DFGLATEKSRWSGSH------QFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIE  236 (289)
T ss_dssp             CCC------------------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHH
T ss_pred             cceeccccccccccc------cccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHH
Confidence            999998654322111      122456999999999987   66789999999999999999999999987654433322


Q ss_pred             -hhhhccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhH
Q 005221          372 -VCKKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKL  438 (708)
Q Consensus       372 -i~~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~  438 (708)
                       +...........+...+|.                     .+.+||.+||..||.+||++.++++..
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~---------------------~l~~li~~~l~~~p~~Rps~~ell~~L  283 (289)
T 3og7_A          237 MVGRGSLSPDLSKVRSNCPK---------------------RMKRLMAECLKKKRDERPSFPRILAEI  283 (289)
T ss_dssp             HHHHTSCCCCTTSSCTTSCH---------------------HHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             HhcccccCcchhhccccCCH---------------------HHHHHHHHHccCChhhCCCHHHHHHHH
Confidence             2222333333333444454                     456666666666666666666666553


No 182
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=2.1e-40  Score=347.40  Aligned_cols=256  Identities=19%  Similarity=0.183  Sum_probs=203.0

Q ss_pred             CCeEEEE-eEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCC-CCCCCChHHHHHHHHcCCCCCccEEEEEe
Q 005221          139 PMYRLER-KLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSK-GCNYGPPYEWQVYNTLGGSHGVPRVHFKG  216 (708)
Q Consensus       139 ~~Y~i~~-~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~-~~~~~~~~Ei~il~~L~h~~~v~~~~~~~  216 (708)
                      ++|.+.+ .||+|+||.||+|.+..        ..++..||||++..... .....+.+|+.+++.|+|+|++..+..+ 
T Consensus         9 ~~~~i~~~~lg~G~~g~Vy~~~~~~--------~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-   79 (287)
T 1u59_A            9 DNLLIADIELGCGNFGSVRQGVYRM--------RKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-   79 (287)
T ss_dssp             GGEEEEEEEEECCTTEEEEEEEEC-----------CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-
T ss_pred             HHhhhhhccccccCceeEEEeEecc--------CCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-
Confidence            4688877 99999999999998743        11578899999986532 2233577899999999999977777666 


Q ss_pred             eeCCEEEEEEecC-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcEEEec
Q 005221          217 RQGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVD  295 (708)
Q Consensus       217 ~~~~~~~lvme~~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~vkL~D  295 (708)
                       ..+.+++|||++ +++|.+++......+++..++.++.||+.||.|||++||+||||||+|||++.++     .+||+|
T Consensus        80 -~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~-----~~kl~D  153 (287)
T 1u59_A           80 -QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRH-----YAKISD  153 (287)
T ss_dssp             -ESSSEEEEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETT-----EEEECC
T ss_pred             -cCCCcEEEEEeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCchheEEEcCCC-----CEEECc
Confidence             455689999999 7899999987766799999999999999999999999999999999999998776     699999


Q ss_pred             cCccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCCchhhhhh
Q 005221          296 LGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLR-GRLPWQGYQGENKGFLVCK  374 (708)
Q Consensus       296 FGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLlt-G~~Pf~~~~~~~~~~~i~~  374 (708)
                      ||++..........     .......||+.|+|||++.+..++.++|||||||++|+|++ |+.||.+....+....+..
T Consensus       154 fg~~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~i~~  228 (287)
T 1u59_A          154 FGLSKALGADDSYY-----TARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQ  228 (287)
T ss_dssp             CTTCEECTTCSCEE-----CCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHT
T ss_pred             ccceeeeccCccee-----eccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHhc
Confidence            99998765432211     11223457899999999999999999999999999999998 9999987655443333332


Q ss_pred             hccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhHH
Q 005221          375 KKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKLI  439 (708)
Q Consensus       375 ~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~~  439 (708)
                      .....    ++..+|                     ..+.+||.+||..||++||++.+++++++
T Consensus       229 ~~~~~----~~~~~~---------------------~~l~~li~~~l~~~p~~Rps~~~l~~~l~  268 (287)
T 1u59_A          229 GKRME----CPPECP---------------------PELYALMSDCWIYKWEDRPDFLTVEQRMR  268 (287)
T ss_dssp             TCCCC----CCTTCC---------------------HHHHHHHHHTTCSSGGGSCCHHHHHHHHH
T ss_pred             CCcCC----CCCCcC---------------------HHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence            22111    111222                     47889999999999999999999999876


No 183
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00  E-value=7.1e-40  Score=366.52  Aligned_cols=246  Identities=18%  Similarity=0.199  Sum_probs=197.1

Q ss_pred             CCCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCCCCCCChHHHHHHHHcCCCCCccEEEEEe
Q 005221          137 GSPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNTLGGSHGVPRVHFKG  216 (708)
Q Consensus       137 ~~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~~~~~~~~Ei~il~~L~h~~~v~~~~~~~  216 (708)
                      ..++|++++.||+|+||.||+|.+            .++.||||+++...  ....+.+|+.+|++|+|+|+|..+..+.
T Consensus       191 ~~~~~~~~~~lG~G~fg~V~~~~~------------~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~  256 (450)
T 1k9a_A          191 NMKELKLLQTIGKGEFGDVMLGDY------------RGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIV  256 (450)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEE------------TTEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEE
T ss_pred             ChHHeEEEeeecCcCCeeEEEEEe------------cCCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEE
Confidence            346799999999999999999987            45789999997653  2446789999999999999888888777


Q ss_pred             eeCCEEEEEEecC-CCCHHHHHhccCC-CCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcEEEe
Q 005221          217 RQGDYYVMVMDML-GPSLWDVWNNNSH-TMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLV  294 (708)
Q Consensus       217 ~~~~~~~lvme~~-ggsL~~~l~~~~~-~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~vkL~  294 (708)
                      .....++|||||+ +|+|.+++...+. .+++..++.++.||+.||.|||++|||||||||+|||++.++     .+||+
T Consensus       257 ~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~-----~~kl~  331 (450)
T 1k9a_A          257 EEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDN-----VAKVS  331 (450)
T ss_dssp             CTTSCEEEEEECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTS-----CEEEC
T ss_pred             cCCCceEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEECCCC-----CEEEe
Confidence            6666899999999 8899999987653 479999999999999999999999999999999999998877     59999


Q ss_pred             ccCccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCCchhhhh
Q 005221          295 DLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLR-GRLPWQGYQGENKGFLVC  373 (708)
Q Consensus       295 DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLlt-G~~Pf~~~~~~~~~~~i~  373 (708)
                      |||+++......           ....+|+.|+|||++.+..++.++|||||||+||||++ |+.||.+....+....+.
T Consensus       332 DfG~a~~~~~~~-----------~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~  400 (450)
T 1k9a_A          332 DFGLTKEASSTQ-----------DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVE  400 (450)
T ss_dssp             CCTTCEECC-----------------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTHHHHHH
T ss_pred             eCCCcccccccc-----------cCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Confidence            999998543321           12347899999999999999999999999999999998 999999877666554444


Q ss_pred             hhccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHh
Q 005221          374 KKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQK  437 (708)
Q Consensus       374 ~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h  437 (708)
                      ......    .+..+|.                     .+.+||.+|+..||.+|||+.++++.
T Consensus       401 ~~~~~~----~p~~~~~---------------------~l~~li~~cl~~dp~~Rpt~~~l~~~  439 (450)
T 1k9a_A          401 KGYKMD----APDGCPP---------------------AVYDVMKNCWHLDAATRPTFLQLREQ  439 (450)
T ss_dssp             TTCCCC----CCTTCCH---------------------HHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             cCCCCC----CCCcCCH---------------------HHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            332211    2234554                     45566666666666666666666554


No 184
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00  E-value=1.3e-40  Score=363.82  Aligned_cols=255  Identities=18%  Similarity=0.213  Sum_probs=201.1

Q ss_pred             CCCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCC-CCCCCCChHHHHHHHHcCCCCCccEEEEE
Q 005221          137 GSPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSS-KGCNYGPPYEWQVYNTLGGSHGVPRVHFK  215 (708)
Q Consensus       137 ~~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~-~~~~~~~~~Ei~il~~L~h~~~v~~~~~~  215 (708)
                      ..++|++.+.||+|+||.||+|++..          +++.||||+++... ......+.+|+.+|+.|+|+|+|..+..+
T Consensus       112 ~~~~~~~~~~lG~G~~g~V~~~~~~~----------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~  181 (377)
T 3cbl_A          112 NHEDLVLGEQIGRGNFGEVFSGRLRA----------DNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC  181 (377)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEETT----------TCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEE
T ss_pred             chHHeEEeeEeccCCCCeEEEEEEec----------CCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE
Confidence            44689999999999999999999976          68899999987542 22235688999999999999877666555


Q ss_pred             eeeCCEEEEEEecC-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcEEEe
Q 005221          216 GRQGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLV  294 (708)
Q Consensus       216 ~~~~~~~~lvme~~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~vkL~  294 (708)
                       ...+.++|||||+ +++|.+++...+..+++..+..++.||+.||+|||++|||||||||+|||++.++     .+||+
T Consensus       182 -~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nil~~~~~-----~~kl~  255 (377)
T 3cbl_A          182 -TQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKN-----VLKIS  255 (377)
T ss_dssp             -CSSSSCEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTC-----CEEEC
T ss_pred             -ecCCCcEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcCCcccCHHHEEEcCCC-----cEEEC
Confidence             5667789999999 8999999987766799999999999999999999999999999999999998877     59999


Q ss_pred             ccCccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCCchhhhh
Q 005221          295 DLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLR-GRLPWQGYQGENKGFLVC  373 (708)
Q Consensus       295 DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLlt-G~~Pf~~~~~~~~~~~i~  373 (708)
                      |||+++...+...      ........+|+.|+|||++.+..++.++|||||||+||||++ |..||.+.........+.
T Consensus       256 DfG~s~~~~~~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~~~~~~  329 (377)
T 3cbl_A          256 DFGMSREEADGVY------AASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVE  329 (377)
T ss_dssp             CGGGCEECTTSEE------ECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHHHHHHH
T ss_pred             cCCCceecCCCce------eecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Confidence            9999986543211      111122346889999999999999999999999999999998 999999865544333333


Q ss_pred             hhccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhH
Q 005221          374 KKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKL  438 (708)
Q Consensus       374 ~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~  438 (708)
                      .....+    .+..+|.                     .+.+||.+||..||++|||+.++++.+
T Consensus       330 ~~~~~~----~~~~~~~---------------------~l~~li~~cl~~dP~~Rps~~~i~~~L  369 (377)
T 3cbl_A          330 KGGRLP----CPELCPD---------------------AVFRLMEQCWAYEPGQRPSFSTIYQEL  369 (377)
T ss_dssp             TTCCCC----CCTTCCH---------------------HHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             cCCCCC----CCCCCCH---------------------HHHHHHHHHcCCCchhCcCHHHHHHHH
Confidence            322211    1223443                     566777777777777777777776654


No 185
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00  E-value=1.4e-40  Score=352.57  Aligned_cols=262  Identities=16%  Similarity=0.185  Sum_probs=202.9

Q ss_pred             CCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCC-CCCCChHHHHHHHHc-CCCCCccEEEEE
Q 005221          138 SPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKG-CNYGPPYEWQVYNTL-GGSHGVPRVHFK  215 (708)
Q Consensus       138 ~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~-~~~~~~~Ei~il~~L-~h~~~v~~~~~~  215 (708)
                      .++|++.+.||+|+||.||+|++...     ....+++.||||++...... ....+.+|+.++.++ +|+|++..+..+
T Consensus        26 ~~~y~~~~~lg~G~~g~Vy~~~~~~~-----~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~  100 (316)
T 2xir_A           26 RDRLKLGKPLGRGAFGQVIEADAFGI-----DKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGAC  100 (316)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESS-----SSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             hhheeeeeEEcCCCceeEEEEEEecC-----CccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEE
Confidence            46899999999999999999997541     01226789999999765321 123467899999999 466766666666


Q ss_pred             eeeCCEEEEEEecC-CCCHHHHHhccCCC---------------CCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEE
Q 005221          216 GRQGDYYVMVMDML-GPSLWDVWNNNSHT---------------MSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFL  279 (708)
Q Consensus       216 ~~~~~~~~lvme~~-ggsL~~~l~~~~~~---------------l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NIL  279 (708)
                      ...+..+++||||+ +++|.+++......               +++..++.++.||+.||.|||++||+||||||+|||
T Consensus       101 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil  180 (316)
T 2xir_A          101 TKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNIL  180 (316)
T ss_dssp             CCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEE
T ss_pred             ecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEE
Confidence            66667799999999 78999999875432               899999999999999999999999999999999999


Q ss_pred             eCCCCCCCCCcEEEeccCccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCC
Q 005221          280 LGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLR-GRL  358 (708)
Q Consensus       280 l~~~g~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLlt-G~~  358 (708)
                      ++.++     .+||+|||+++..........      .....||+.|+|||++.+..++.++|||||||++|+|++ |..
T Consensus       181 ~~~~~-----~~kl~Dfg~~~~~~~~~~~~~------~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~  249 (316)
T 2xir_A          181 LSEKN-----VVKICDFGLARDIYKDPDYVR------KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGAS  249 (316)
T ss_dssp             ECGGG-----CEEECCCGGGSCTTTCTTSEE------ETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCC
T ss_pred             ECCCC-----CEEECCCccccccccCcccee------ccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCC
Confidence            98776     599999999987654332111      123568999999999999999999999999999999998 999


Q ss_pred             CCCCCCCCCchhhhhhhccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhH
Q 005221          359 PWQGYQGENKGFLVCKKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKL  438 (708)
Q Consensus       359 Pf~~~~~~~~~~~i~~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~  438 (708)
                      ||.+................   ...+..++                     ..+.++|.+||..||.+|||+.|+++|+
T Consensus       250 p~~~~~~~~~~~~~~~~~~~---~~~~~~~~---------------------~~l~~li~~~l~~dp~~Rps~~ell~~L  305 (316)
T 2xir_A          250 PYPGVKIDEEFCRRLKEGTR---MRAPDYTT---------------------PEMYQTMLDCWHGEPSQRPTFSELVEHL  305 (316)
T ss_dssp             SSTTCCCSHHHHHHHHHTCC---CCCCTTCC---------------------HHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             CCcccchhHHHHHHhccCcc---CCCCCCCC---------------------HHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence            99876544332222221111   11111122                     4678889999999999999999999886


Q ss_pred             H
Q 005221          439 I  439 (708)
Q Consensus       439 ~  439 (708)
                      -
T Consensus       306 ~  306 (316)
T 2xir_A          306 G  306 (316)
T ss_dssp             H
T ss_pred             H
Confidence            4


No 186
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00  E-value=1.5e-40  Score=352.06  Aligned_cols=259  Identities=17%  Similarity=0.199  Sum_probs=201.3

Q ss_pred             CCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCC-CCCCCChHHHHHHHHcCCCCCccEEEEEe
Q 005221          138 SPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSK-GCNYGPPYEWQVYNTLGGSHGVPRVHFKG  216 (708)
Q Consensus       138 ~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~-~~~~~~~~Ei~il~~L~h~~~v~~~~~~~  216 (708)
                      ..+|++.+.||+|+||.||+|++....     ...++..||||++..... .....+.+|+.+++.|+|+|++..+..+ 
T Consensus        22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~-----~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~-   95 (314)
T 2ivs_A           22 RKNLVLGKTLGEGEFGKVVKATAFHLK-----GRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGAC-   95 (314)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEEETGG-----GCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-
T ss_pred             hhheeeeeeecccCCeeEEEEEEeccC-----cccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEE-
Confidence            357999999999999999999985410     112568999999975432 1123467899999999998876666554 


Q ss_pred             eeCCEEEEEEecC-CCCHHHHHhccC-----------------------CCCCHHHHHHHHHHHHHHHHHHHhCCceecC
Q 005221          217 RQGDYYVMVMDML-GPSLWDVWNNNS-----------------------HTMSIEMVACIAIEAISILEKMHSKGYVHGD  272 (708)
Q Consensus       217 ~~~~~~~lvme~~-ggsL~~~l~~~~-----------------------~~l~~~~~~~i~~qil~aL~yLH~~gIvHrD  272 (708)
                      ...+.+++||||+ +++|.+++....                       ..+++..++.++.||+.||.|||++||+|||
T Consensus        96 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~d  175 (314)
T 2ivs_A           96 SQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRD  175 (314)
T ss_dssp             CSSSSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred             ecCCceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCCCcccc
Confidence            5667799999999 899999997643                       2389999999999999999999999999999


Q ss_pred             CCCCcEEeCCCCCCCCCcEEEeccCccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHH
Q 005221          273 VKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIF  352 (708)
Q Consensus       273 IKP~NILl~~~g~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~e  352 (708)
                      |||+|||++.++     .+||+|||+++.........      ......+|+.|+|||++.+..++.++|||||||++|+
T Consensus       176 ikp~NIli~~~~-----~~kl~Dfg~~~~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e  244 (314)
T 2ivs_A          176 LAARNILVAEGR-----KMKISDFGLSRDVYEEDSYV------KRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWE  244 (314)
T ss_dssp             CSGGGEEEETTT-----EEEECCCTTCEECTTTSCEE------CSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHH
T ss_pred             cchheEEEcCCC-----CEEEccccccccccccccce------eccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHH
Confidence            999999998777     69999999998765432211      1123458899999999999999999999999999999


Q ss_pred             HHh-CCCCCCCCCCCCchhhhhhhccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcc
Q 005221          353 LLR-GRLPWQGYQGENKGFLVCKKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPIS  431 (708)
Q Consensus       353 Llt-G~~Pf~~~~~~~~~~~i~~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~  431 (708)
                      |++ |..||.+.........+......    ..+..++                     ..+.+||.+||..||++||++
T Consensus       245 l~t~g~~p~~~~~~~~~~~~~~~~~~~----~~~~~~~---------------------~~~~~li~~~l~~dp~~Rps~  299 (314)
T 2ivs_A          245 IVTLGGNPYPGIPPERLFNLLKTGHRM----ERPDNCS---------------------EEMYRLMLQCWKQEPDKRPVF  299 (314)
T ss_dssp             HHTTSCCSSTTCCGGGHHHHHHTTCCC----CCCTTCC---------------------HHHHHHHHHHTCSSGGGSCCH
T ss_pred             HHhCCCCCCCCCCHHHHHHHhhcCCcC----CCCccCC---------------------HHHHHHHHHHccCChhhCcCH
Confidence            999 99999886654433333222211    1112222                     467788888888888888888


Q ss_pred             hHHHHhH
Q 005221          432 TEGAQKL  438 (708)
Q Consensus       432 ~e~l~h~  438 (708)
                      .+++++.
T Consensus       300 ~~l~~~l  306 (314)
T 2ivs_A          300 ADISKDL  306 (314)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            8888775


No 187
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00  E-value=5.6e-40  Score=350.39  Aligned_cols=250  Identities=22%  Similarity=0.290  Sum_probs=202.6

Q ss_pred             CCCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCC------CCCCChHHHHHHHHcCC-CCCc
Q 005221          137 GSPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKG------CNYGPPYEWQVYNTLGG-SHGV  209 (708)
Q Consensus       137 ~~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~------~~~~~~~Ei~il~~L~h-~~~v  209 (708)
                      ..++|++++.||+|+||.||+|++..          +++.||||++......      ....+.+|+.+++.+.| +++|
T Consensus        41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~----------~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i  110 (320)
T 3a99_A           41 LESQYQVGPLLGSGGFGSVYSGIRVS----------DNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV  110 (320)
T ss_dssp             CTTTEEEEEECSSSSSCEEEEEEETT----------TTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSB
T ss_pred             ccCceEEEEEEeeCCCeEEEEEEECC----------CCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCc
Confidence            35689999999999999999999977          7899999998765321      23567889999999975 3345


Q ss_pred             cEEEEEeeeCCEEEEEEecC-C-CCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeC-CCCCC
Q 005221          210 PRVHFKGRQGDYYVMVMDML-G-PSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLG-PPGTP  286 (708)
Q Consensus       210 ~~~~~~~~~~~~~~lvme~~-g-gsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~-~~g~~  286 (708)
                      +.+..++...+.+++|||++ + ++|.+++...+ .+++..++.++.||+.||.|||++||+||||||+|||++ .++  
T Consensus       111 ~~~~~~~~~~~~~~lv~e~~~~~~~L~~~l~~~~-~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~--  187 (320)
T 3a99_A          111 IRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRG--  187 (320)
T ss_dssp             CCEEEEEECSSEEEEEEECCSSEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTT--
T ss_pred             eEEEEEEecCCcEEEEEEcCCCCccHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHHCCcEeCCCCHHHEEEeCCCC--
Confidence            55556667788899999999 3 89999998764 699999999999999999999999999999999999998 444  


Q ss_pred             CCCcEEEeccCccccccCCCCCccccccCCCceeeccccccchhhhcCCCC-CchhhHHHHHHHHHHHHhCCCCCCCCCC
Q 005221          287 DEKKLFLVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTG-SRRDDLESLAYTLIFLLRGRLPWQGYQG  365 (708)
Q Consensus       287 ~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~-s~~~DIwSlGviL~eLltG~~Pf~~~~~  365 (708)
                         .+||+|||+++.......          ....||+.|+|||++.+..+ +.++|||||||+||+|++|+.||.... 
T Consensus       188 ---~~kL~Dfg~~~~~~~~~~----------~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~-  253 (320)
T 3a99_A          188 ---ELKLIDFGSGALLKDTVY----------TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE-  253 (320)
T ss_dssp             ---EEEECCCTTCEECCSSCB----------CCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH-
T ss_pred             ---CEEEeeCccccccccccc----------cCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChh-
Confidence               699999999987654321          13559999999999987776 689999999999999999999997532 


Q ss_pred             CCchhhhhhhccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhHHHHhcc
Q 005221          366 ENKGFLVCKKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKLIYQVGH  444 (708)
Q Consensus       366 ~~~~~~i~~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~~f~~~~  444 (708)
                           .+.....     .+...++                     ..+.+||.+||..||++||++.|+++||||+...
T Consensus       254 -----~~~~~~~-----~~~~~~~---------------------~~~~~li~~~l~~dp~~Rps~~~ll~hp~~~~~~  301 (320)
T 3a99_A          254 -----EIIRGQV-----FFRQRVS---------------------SECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVL  301 (320)
T ss_dssp             -----HHHHCCC-----CCSSCCC---------------------HHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSCC
T ss_pred             -----hhhcccc-----cccccCC---------------------HHHHHHHHHHccCChhhCcCHHHHhcCHhhcCcc
Confidence                 1111111     0111122                     4788999999999999999999999999987543


No 188
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00  E-value=4.5e-40  Score=341.22  Aligned_cols=252  Identities=23%  Similarity=0.309  Sum_probs=188.3

Q ss_pred             CCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCCC----CCCChHHHHHHHHcCCCCCccEEE
Q 005221          138 SPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGC----NYGPPYEWQVYNTLGGSHGVPRVH  213 (708)
Q Consensus       138 ~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~~----~~~~~~Ei~il~~L~h~~~v~~~~  213 (708)
                      .++|++.+.||+|+||.||+|++            .+..||+|++.......    ...+.+|+.+++.++|+|++..+.
T Consensus         6 ~~~~~~~~~lg~G~~g~V~~~~~------------~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~   73 (271)
T 3dtc_A            6 FAELTLEEIIGIGGFGKVYRAFW------------IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRG   73 (271)
T ss_dssp             TTSEEEEEEEEEETTEEEEEEEE------------TTEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred             hhheeeeeeeccCCCeEEEEEEE------------cCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEE
Confidence            45899999999999999999997            46789999987653322    234678999999999988666555


Q ss_pred             EEeeeCCEEEEEEecC-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC---ceecCCCCCcEEeCCCCC---C
Q 005221          214 FKGRQGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKG---YVHGDVKPENFLLGPPGT---P  286 (708)
Q Consensus       214 ~~~~~~~~~~lvme~~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~g---IvHrDIKP~NILl~~~g~---~  286 (708)
                      . +..++.+++||||+ +++|.+++..  ..+++..++.++.||+.||.|||++|   |+||||||+|||++....   .
T Consensus        74 ~-~~~~~~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~  150 (271)
T 3dtc_A           74 V-CLKEPNLCLVMEFARGGPLNRVLSG--KRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDL  150 (271)
T ss_dssp             E-ECCC--CEEEEECCTTEEHHHHHTS--SCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCC
T ss_pred             E-EecCCceEEEEEcCCCCCHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccc
Confidence            4 46677899999999 8999988864  36999999999999999999999999   999999999999986321   1


Q ss_pred             CCCcEEEeccCccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCC
Q 005221          287 DEKKLFLVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGE  366 (708)
Q Consensus       287 ~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLltG~~Pf~~~~~~  366 (708)
                      ....+||+|||+++.......          ....||+.|+|||++.+..++.++|||||||++|+|++|+.||.+....
T Consensus       151 ~~~~~kl~Dfg~~~~~~~~~~----------~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~  220 (271)
T 3dtc_A          151 SNKILKITDFGLAREWHRTTK----------MSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGL  220 (271)
T ss_dssp             SSCCEEECCCCC-----------------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHH
T ss_pred             cCcceEEccCCcccccccccc----------cCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH
Confidence            234799999999986554322          1345999999999999999999999999999999999999999876543


Q ss_pred             CchhhhhhhccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhH
Q 005221          367 NKGFLVCKKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKL  438 (708)
Q Consensus       367 ~~~~~i~~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~  438 (708)
                      .....+.....   ...++..+|                     ..+.+|+.+||..||.+|||+.|+++++
T Consensus       221 ~~~~~~~~~~~---~~~~~~~~~---------------------~~~~~li~~~l~~~p~~Rps~~e~l~~L  268 (271)
T 3dtc_A          221 AVAYGVAMNKL---ALPIPSTCP---------------------EPFAKLMEDCWNPDPHSRPSFTNILDQL  268 (271)
T ss_dssp             HHHHHHHTSCC---CCCCCTTCC---------------------HHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             HHHHhhhcCCC---CCCCCcccC---------------------HHHHHHHHHHhcCCcccCcCHHHHHHHH
Confidence            33222222211   111122222                     4678899999999999999999999885


No 189
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=7.9e-40  Score=351.79  Aligned_cols=262  Identities=15%  Similarity=0.155  Sum_probs=200.9

Q ss_pred             CCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCC-CCCCCCChHHHHHHHHc-CCCCCccEEEEE
Q 005221          138 SPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSS-KGCNYGPPYEWQVYNTL-GGSHGVPRVHFK  215 (708)
Q Consensus       138 ~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~-~~~~~~~~~Ei~il~~L-~h~~~v~~~~~~  215 (708)
                      .++|++.+.||+|+||.||+|++....     ...++..||||++.... ......+.+|+.+|.+| .|+|++..+. +
T Consensus        44 ~~~y~~~~~lG~G~~g~V~~~~~~~~~-----~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~-~  117 (344)
T 1rjb_A           44 RENLEFGKVLGSGAFGKVMNATAYGIS-----KTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLG-A  117 (344)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESCS-----SSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEE-E
T ss_pred             HHHceeeeeecCCCCceeEEeeeeccc-----cCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEE-E
Confidence            357999999999999999999985310     11257789999997542 22334578899999999 7777655555 4


Q ss_pred             eeeCCEEEEEEecC-CCCHHHHHhccCC----------------------CCCHHHHHHHHHHHHHHHHHHHhCCceecC
Q 005221          216 GRQGDYYVMVMDML-GPSLWDVWNNNSH----------------------TMSIEMVACIAIEAISILEKMHSKGYVHGD  272 (708)
Q Consensus       216 ~~~~~~~~lvme~~-ggsL~~~l~~~~~----------------------~l~~~~~~~i~~qil~aL~yLH~~gIvHrD  272 (708)
                      +...+.++|||||+ +++|.+++.....                      .+++..++.++.||+.||.|||++||+|||
T Consensus       118 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~D  197 (344)
T 1rjb_A          118 CTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRD  197 (344)
T ss_dssp             ECSSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETT
T ss_pred             EeeCCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCCcccCC
Confidence            46677899999999 8899999986542                      379999999999999999999999999999


Q ss_pred             CCCCcEEeCCCCCCCCCcEEEeccCccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHH
Q 005221          273 VKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIF  352 (708)
Q Consensus       273 IKP~NILl~~~g~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~e  352 (708)
                      |||+||||+.++     .+||+|||++...........      .....||+.|+|||++.+..++.++|||||||+||+
T Consensus       198 ikp~NIll~~~~-----~~kL~Dfg~~~~~~~~~~~~~------~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~e  266 (344)
T 1rjb_A          198 LAARNVLVTHGK-----VVKICDFGLARDIMSDSNYVV------RGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWE  266 (344)
T ss_dssp             CSGGGEEEETTT-----EEEECCCGGGSCGGGCTTSEE------ETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHH
T ss_pred             CChhhEEEcCCC-----cEEeCCCccCcccccCcccee------ccCccCccCccCHHHhccCCCChhHhHHHHHHHHHH
Confidence            999999998777     699999999987655432111      123558999999999999999999999999999999


Q ss_pred             HHh-CCCCCCCCCCCCchhhhhhhccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcc
Q 005221          353 LLR-GRLPWQGYQGENKGFLVCKKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPIS  431 (708)
Q Consensus       353 Llt-G~~Pf~~~~~~~~~~~i~~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~  431 (708)
                      |++ |..||.+.........+.......   ..+..+|                     ..+.+||.+||..||.+||++
T Consensus       267 l~t~g~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~~---------------------~~l~~li~~~l~~dp~~Rps~  322 (344)
T 1rjb_A          267 IFSLGVNPYPGIPVDANFYKLIQNGFKM---DQPFYAT---------------------EEIYIIMQSCWAFDSRKRPSF  322 (344)
T ss_dssp             HTTTSCCSSTTCCCSHHHHHHHHTTCCC---CCCTTCC---------------------HHHHHHHHHHTCSSGGGSCCH
T ss_pred             HHcCCCCCcccCCcHHHHHHHHhcCCCC---CCCCCCC---------------------HHHHHHHHHHcCCCchhCcCH
Confidence            998 999998865544333333222111   1111222                     467788888888888888888


Q ss_pred             hHHHHhHHH
Q 005221          432 TEGAQKLIY  440 (708)
Q Consensus       432 ~e~l~h~~f  440 (708)
                      .++++++.-
T Consensus       323 ~~l~~~l~~  331 (344)
T 1rjb_A          323 PNLTSFLGC  331 (344)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            888888753


No 190
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00  E-value=4.9e-40  Score=345.98  Aligned_cols=260  Identities=17%  Similarity=0.233  Sum_probs=200.8

Q ss_pred             CCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCC-CCCCCChHHHHHHHHcCCCCCccEEEEEe
Q 005221          138 SPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSK-GCNYGPPYEWQVYNTLGGSHGVPRVHFKG  216 (708)
Q Consensus       138 ~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~-~~~~~~~~Ei~il~~L~h~~~v~~~~~~~  216 (708)
                      ..+|++.+.||+|+||.||+|++...       ......||+|.+..... .....+.+|+.++++|+|+|++..+..+.
T Consensus        24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~-------~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~   96 (298)
T 3f66_A           24 SLIVHFNEVIGRGHFGCVYHGTLLDN-------DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICL   96 (298)
T ss_dssp             GEEEEEEEEEEEETTEEEEEEEEC------------CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEC
T ss_pred             ceehhhcceeeecCCceEEEEEEecC-------CCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEE
Confidence            34699999999999999999997541       11345689999876432 12235678999999999999888888877


Q ss_pred             eeCCEEEEEEecC-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcEEEec
Q 005221          217 RQGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVD  295 (708)
Q Consensus       217 ~~~~~~~lvme~~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~vkL~D  295 (708)
                      ..++..++|||++ +++|.+++......+++..++.++.||+.||.|||++||+||||||+|||++.++     .+||+|
T Consensus        97 ~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH~~~i~H~dikp~Nil~~~~~-----~~kl~D  171 (298)
T 3f66_A           97 RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKF-----TVKVAD  171 (298)
T ss_dssp             CSSSCCEEEEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTC-----CEEECS
T ss_pred             cCCCceEEEEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEECCCC-----CEEECc
Confidence            7788899999999 7899999988777899999999999999999999999999999999999998777     599999


Q ss_pred             cCccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCCchhhhhh
Q 005221          296 LGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLR-GRLPWQGYQGENKGFLVCK  374 (708)
Q Consensus       296 FGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLlt-G~~Pf~~~~~~~~~~~i~~  374 (708)
                      ||+++..........    .......||+.|+|||++.+..++.++|||||||++|+|++ |.+||.+....+....+..
T Consensus       172 fg~a~~~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~~~  247 (298)
T 3f66_A          172 FGLARDMYDKEYYSV----HNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ  247 (298)
T ss_dssp             CGGGCCCSCGGGCBC---------CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHHHHHHT
T ss_pred             ccccccccccchhcc----ccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhc
Confidence            999987654322111    11234568899999999999999999999999999999999 6778887665554444443


Q ss_pred             hccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhH
Q 005221          375 KKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKL  438 (708)
Q Consensus       375 ~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~  438 (708)
                      ......+    ..+|                     ..+.+++.+||..||.+||++.|+++..
T Consensus       248 ~~~~~~~----~~~~---------------------~~l~~li~~~l~~~p~~Rps~~ell~~L  286 (298)
T 3f66_A          248 GRRLLQP----EYCP---------------------DPLYEVMLKCWHPKAEMRPSFSELVSRI  286 (298)
T ss_dssp             TCCCCCC----TTCC---------------------HHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             CCCCCCC----ccCC---------------------HHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence            3322222    2233                     3566777777777777777777776654


No 191
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00  E-value=4.8e-40  Score=343.36  Aligned_cols=256  Identities=20%  Similarity=0.219  Sum_probs=200.0

Q ss_pred             CCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCC-CCCCCChHHHHHHHHcCCCCCccEEEEEe
Q 005221          138 SPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSK-GCNYGPPYEWQVYNTLGGSHGVPRVHFKG  216 (708)
Q Consensus       138 ~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~-~~~~~~~~Ei~il~~L~h~~~v~~~~~~~  216 (708)
                      .++|++.+.||+|+||.||+|++...       ...+..||+|++..... .....+.+|+.+++.|+|+|++..+..+ 
T Consensus        11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~-------~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-   82 (281)
T 3cc6_A           11 REDVVLNRILGEGFFGEVYEGVYTNH-------KGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGII-   82 (281)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEEECT-------TCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEE-
T ss_pred             ccceEEEEEEEecCCeeEEEeEEcCC-------CCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEE-
Confidence            35799999999999999999998651       11456799999876522 2234577899999999999977777665 


Q ss_pred             eeCCEEEEEEecC-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcEEEec
Q 005221          217 RQGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVD  295 (708)
Q Consensus       217 ~~~~~~~lvme~~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~vkL~D  295 (708)
                      .. +..++|||++ +++|.+++......+++..+..++.||+.||.|||++||+||||||+|||++.++     .+||+|
T Consensus        83 ~~-~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~-----~~kl~D  156 (281)
T 3cc6_A           83 EE-EPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPE-----CVKLGD  156 (281)
T ss_dssp             CS-SSCEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEEETT-----EEEECC
T ss_pred             cC-CCCEEEEecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEECCCC-----cEEeCc
Confidence            33 3467999999 8999999988766799999999999999999999999999999999999998777     699999


Q ss_pred             cCccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCCchhhhhh
Q 005221          296 LGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLR-GRLPWQGYQGENKGFLVCK  374 (708)
Q Consensus       296 FGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLlt-G~~Pf~~~~~~~~~~~i~~  374 (708)
                      ||++..........       .....+|+.|+|||++.+..++.++|||||||++|+|++ |+.||......+....+..
T Consensus       157 fg~~~~~~~~~~~~-------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~~~~~~~  229 (281)
T 3cc6_A          157 FGLSRYIEDEDYYK-------ASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEK  229 (281)
T ss_dssp             CCGGGCC----------------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGHHHHHHH
T ss_pred             cCCCcccccccccc-------cccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHHHHHHHhc
Confidence            99998765432211       123457899999999999999999999999999999998 9999987655544333333


Q ss_pred             hccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhHH
Q 005221          375 KKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKLI  439 (708)
Q Consensus       375 ~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~~  439 (708)
                      ......+    ..+|                     ..+.+||.+||..||++||++.|+++++-
T Consensus       230 ~~~~~~~----~~~~---------------------~~l~~li~~~l~~~p~~Rps~~ell~~L~  269 (281)
T 3cc6_A          230 GDRLPKP----DLCP---------------------PVLYTLMTRCWDYDPSDRPRFTELVCSLS  269 (281)
T ss_dssp             TCCCCCC----TTCC---------------------HHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             CCCCCCC----CCCC---------------------HHHHHHHHHHccCCchhCcCHHHHHHHHH
Confidence            2221111    1122                     46788889999999999999999888753


No 192
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00  E-value=8.8e-40  Score=344.46  Aligned_cols=272  Identities=18%  Similarity=0.120  Sum_probs=201.0

Q ss_pred             CCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCC-CCCCChHHHHHHHHcCCCCCccEEEEEee
Q 005221          139 PMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKG-CNYGPPYEWQVYNTLGGSHGVPRVHFKGR  217 (708)
Q Consensus       139 ~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~-~~~~~~~Ei~il~~L~h~~~v~~~~~~~~  217 (708)
                      .+|+++++||+|+||.||+|+....      ...+++.||+|++...... ....+.+|+.+|+.|+|+|++..+..+..
T Consensus        21 ~~~~~~~~lg~G~~g~V~~~~~~~~------~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~   94 (302)
T 4e5w_A           21 RFLKRIRDLGEGHFGKVELCRYDPE------GDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTE   94 (302)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEECTT------SSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC
T ss_pred             hhhhhhhccCCCCceEEEEEEEccc------cCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEec
Confidence            4699999999999999999995321      1127899999999865322 22457789999999999998777766654


Q ss_pred             e-CCEEEEEEecC-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcEEEec
Q 005221          218 Q-GDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVD  295 (708)
Q Consensus       218 ~-~~~~~lvme~~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~vkL~D  295 (708)
                      . ...+++||||+ +++|.+++......+++..++.++.||+.||.|||++||+||||||+|||++.++     .+||+|
T Consensus        95 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~-----~~kl~D  169 (302)
T 4e5w_A           95 DGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEH-----QVKIGD  169 (302)
T ss_dssp             ---CCEEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETT-----EEEECC
T ss_pred             CCCceEEEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhhcCCcccCCCchheEEEcCCC-----CEEECc
Confidence            3 36789999999 8899999977666799999999999999999999999999999999999998777     699999


Q ss_pred             cCccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhh
Q 005221          296 LGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCKK  375 (708)
Q Consensus       296 FGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLltG~~Pf~~~~~~~~~~~i~~~  375 (708)
                      ||++..........     .......||+.|+|||++.+..++.++|||||||++|+|++|..||....     ......
T Consensus       170 fg~~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~-----~~~~~~  239 (302)
T 4e5w_A          170 FGLTKAIETDKEYY-----TVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPM-----ALFLKM  239 (302)
T ss_dssp             CTTCEECCTTCCEE-----ECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHH-----HHHHHH
T ss_pred             ccccccccCCCcce-----eccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchh-----hHHhhc
Confidence            99998766543211     11223458999999999999999999999999999999999999875321     011110


Q ss_pred             ccCCCCCCccCCCChHHHHHHHHHHcCCCCCcc-c-HHHHHHHHHhhhCCCCCCCCcchHHHHhH
Q 005221          376 KMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEP-N-YAKYISLFDGIVGPNPDIRPISTEGAQKL  438 (708)
Q Consensus       376 ~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP-~-~~~l~~LL~~mL~~dP~~Rps~~e~l~h~  438 (708)
                      .. +..      .......+...+........| . ...+.+||.+||..||.+|||+.++++..
T Consensus       240 ~~-~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L  297 (302)
T 4e5w_A          240 IG-PTH------GQMTVTRLVNTLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGF  297 (302)
T ss_dssp             HC-SCC------GGGHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHH
T ss_pred             cC-Ccc------cccCHHHHHHHHhccCCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHH
Confidence            00 000      011122233333322222111 1 25788999999999999999999988764


No 193
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00  E-value=5.4e-40  Score=351.86  Aligned_cols=259  Identities=17%  Similarity=0.226  Sum_probs=190.9

Q ss_pred             CCCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCC-CCCCCCChHHHHHHHHcCCCCCccEEEEE
Q 005221          137 GSPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSS-KGCNYGPPYEWQVYNTLGGSHGVPRVHFK  215 (708)
Q Consensus       137 ~~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~-~~~~~~~~~Ei~il~~L~h~~~v~~~~~~  215 (708)
                      ...+|+++++||+|+||.||+|++.....      ....+||+|.+.... ......+.+|+.+++.++|+|++..+..+
T Consensus        13 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~------~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~   86 (327)
T 3lzb_A           13 KETEFKKIKVLGSGAFGTVYKGLWIPEGE------KVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGIC   86 (327)
T ss_dssp             CTTTEEEEEEEEECSSEEEEEEEECCTTC------SCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEE
T ss_pred             CHhHceEEEEeeeCCCeEEEEEEEcCCCc------eEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEE
Confidence            35689999999999999999999876110      122346777765432 22334577899999999999977777665


Q ss_pred             eeeCCEEEEEEecC-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcEEEe
Q 005221          216 GRQGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLV  294 (708)
Q Consensus       216 ~~~~~~~~lvme~~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~vkL~  294 (708)
                      . .+. .+++|+++ +++|.+++......+++..++.|+.||+.||.|||++||+||||||+|||++.++     .+||+
T Consensus        87 ~-~~~-~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~-----~~kL~  159 (327)
T 3lzb_A           87 L-TST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQ-----HVKIT  159 (327)
T ss_dssp             E-SSS-EEEEECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETT-----EEEEC
T ss_pred             e-cCC-ceEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCCcCCCCCHHHEEEcCCC-----CEEEc
Confidence            4 444 55666666 9999999988777899999999999999999999999999999999999998777     69999


Q ss_pred             ccCccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCCchhhhh
Q 005221          295 DLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLR-GRLPWQGYQGENKGFLVC  373 (708)
Q Consensus       295 DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLlt-G~~Pf~~~~~~~~~~~i~  373 (708)
                      |||+++..........      .....||+.|+|||++.+..++.++|||||||+||+|++ |.+||.+.........+.
T Consensus       160 DfG~a~~~~~~~~~~~------~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~  233 (327)
T 3lzb_A          160 DFGLAKLLGAEEKEYH------AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE  233 (327)
T ss_dssp             CTTC----------------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHH
T ss_pred             cCcceeEccCcccccc------ccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
Confidence            9999987654332211      123447889999999999999999999999999999999 999999876555444443


Q ss_pred             hhccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhHH
Q 005221          374 KKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKLI  439 (708)
Q Consensus       374 ~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~~  439 (708)
                      .......+    ..++                     ..+.+||.+||..||.+||++.|+++.+-
T Consensus       234 ~~~~~~~~----~~~~---------------------~~l~~li~~~l~~dp~~Rps~~ell~~L~  274 (327)
T 3lzb_A          234 KGERLPQP----PICT---------------------IDVYMIMRKCWMIDADSRPKFRELIIEFS  274 (327)
T ss_dssp             TTCCCCCC----TTBC---------------------HHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             cCCCCCCC----ccCC---------------------HHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence            33222211    1223                     35677777888888888888877776643


No 194
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00  E-value=2.5e-40  Score=355.05  Aligned_cols=259  Identities=17%  Similarity=0.177  Sum_probs=199.2

Q ss_pred             CCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCC-CCCCCChHHHHHHHHcCCCCCccEEEEEe
Q 005221          138 SPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSK-GCNYGPPYEWQVYNTLGGSHGVPRVHFKG  216 (708)
Q Consensus       138 ~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~-~~~~~~~~Ei~il~~L~h~~~v~~~~~~~  216 (708)
                      .++|++++.||+|+||.||+|++...     ....+++.||||+++.... .....+.+|+.+++.|+|+|++..+..+ 
T Consensus        46 ~~~~~~~~~lg~G~~g~Vy~~~~~~~-----~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~-  119 (343)
T 1luf_A           46 RNNIEYVRDIGEGAFGRVFQARAPGL-----LPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVC-  119 (343)
T ss_dssp             GGGCEEEEEEEECSSCEEEEEEEETS-----STTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEE-
T ss_pred             HHHCeeeeeeeecCCeeEEEEEecCc-----CCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-
Confidence            35799999999999999999998741     0112568999999976532 1233577899999999998866666554 


Q ss_pred             eeCCEEEEEEecC-CCCHHHHHhccC-----------------------CCCCHHHHHHHHHHHHHHHHHHHhCCceecC
Q 005221          217 RQGDYYVMVMDML-GPSLWDVWNNNS-----------------------HTMSIEMVACIAIEAISILEKMHSKGYVHGD  272 (708)
Q Consensus       217 ~~~~~~~lvme~~-ggsL~~~l~~~~-----------------------~~l~~~~~~~i~~qil~aL~yLH~~gIvHrD  272 (708)
                      ..++.+++||||+ +++|.+++....                       ..+++..++.|+.||+.||.|||++||+|||
T Consensus       120 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~D  199 (343)
T 1luf_A          120 AVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRD  199 (343)
T ss_dssp             CSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred             ccCCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCC
Confidence            5677899999999 889999997642                       4699999999999999999999999999999


Q ss_pred             CCCCcEEeCCCCCCCCCcEEEeccCccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHH
Q 005221          273 VKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIF  352 (708)
Q Consensus       273 IKP~NILl~~~g~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~e  352 (708)
                      |||+|||++.++     .+||+|||+++........      .......||+.|+|||++.+..++.++|||||||++|+
T Consensus       200 lkp~NIl~~~~~-----~~kl~Dfg~~~~~~~~~~~------~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~e  268 (343)
T 1luf_A          200 LATRNCLVGENM-----VVKIADFGLSRNIYSADYY------KADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWE  268 (343)
T ss_dssp             CSGGGEEECGGG-----CEEECCCSCHHHHTGGGCB------C----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHH
T ss_pred             CCcceEEECCCC-----eEEEeecCCCcccccCccc------cccCCCcccceecChhhhccCCcCcccccHHHHHHHHH
Confidence            999999998776     5999999999876433211      11123558999999999999999999999999999999


Q ss_pred             HHh-CCCCCCCCCCCCchhhhhhhccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcc
Q 005221          353 LLR-GRLPWQGYQGENKGFLVCKKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPIS  431 (708)
Q Consensus       353 Llt-G~~Pf~~~~~~~~~~~i~~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~  431 (708)
                      |++ |..||.+....+....+.......    ++..+|                     ..+.+||.+||..||++||++
T Consensus       269 l~t~g~~p~~~~~~~~~~~~~~~~~~~~----~~~~~~---------------------~~l~~li~~~l~~~p~~Rps~  323 (343)
T 1luf_A          269 IFSYGLQPYYGMAHEEVIYYVRDGNILA----CPENCP---------------------LELYNLMRLCWSKLPADRPSF  323 (343)
T ss_dssp             HHTTTCCTTTTSCHHHHHHHHHTTCCCC----CCTTCC---------------------HHHHHHHHHHTCSSGGGSCCH
T ss_pred             HHhcCCCcCCCCChHHHHHHHhCCCcCC----CCCCCC---------------------HHHHHHHHHHcccCcccCCCH
Confidence            999 999998765444333333322211    122333                     356677777777777777777


Q ss_pred             hHHHHhH
Q 005221          432 TEGAQKL  438 (708)
Q Consensus       432 ~e~l~h~  438 (708)
                      .+++++.
T Consensus       324 ~~~~~~L  330 (343)
T 1luf_A          324 CSIHRIL  330 (343)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            7777664


No 195
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00  E-value=2.1e-40  Score=364.50  Aligned_cols=271  Identities=17%  Similarity=0.166  Sum_probs=202.0

Q ss_pred             CCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCC-CCCCCChHHHHHHHHcCCCCCccEEEEEe
Q 005221          138 SPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSK-GCNYGPPYEWQVYNTLGGSHGVPRVHFKG  216 (708)
Q Consensus       138 ~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~-~~~~~~~~Ei~il~~L~h~~~v~~~~~~~  216 (708)
                      .++|++.+.||+|+||.||+|++..          +++.||||++..... .....+.+|+++|+.|+|+|++..+..+.
T Consensus         8 ~~~y~i~~~LG~G~~g~Vy~~~~~~----------~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~   77 (396)
T 4eut_A            8 NHLWLLSDILGQGATANVFRGRHKK----------TGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEE   77 (396)
T ss_dssp             SEEEEEEEEEEECSSEEEEEEEETT----------TCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEE
T ss_pred             CCceEEEEEEEcCCCeEEEEEEECC----------CCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeec
Confidence            4579999999999999999999977          789999999976432 22334568999999999999887776654


Q ss_pred             ee-CCEEEEEEecC-CCCHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcEE
Q 005221          217 RQ-GDYYVMVMDML-GPSLWDVWNNNS--HTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLF  292 (708)
Q Consensus       217 ~~-~~~~~lvme~~-ggsL~~~l~~~~--~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~vk  292 (708)
                      .. ...++|||||+ +++|.+++....  ..+++..++.++.||+.||.|||++|||||||||+|||+....+ ....+|
T Consensus        78 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~-~~~~~k  156 (396)
T 4eut_A           78 ETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGED-GQSVYK  156 (396)
T ss_dssp             CTTTCCEEEEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEECTT-SCEEEE
T ss_pred             cCCCCeeEEEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEEECCcCHHHEEEeecCC-CceeEE
Confidence            33 34789999999 899999997643  24999999999999999999999999999999999999822111 223699


Q ss_pred             EeccCccccccCCCCCccccccCCCceeeccccccchhhhcC--------CCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q 005221          293 LVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLG--------RTGSRRDDLESLAYTLIFLLRGRLPWQGYQ  364 (708)
Q Consensus       293 L~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~--------~~~s~~~DIwSlGviL~eLltG~~Pf~~~~  364 (708)
                      |+|||+++.......         ....+||+.|+|||++.+        ..++.++|||||||++|+|++|+.||....
T Consensus       157 L~DFG~a~~~~~~~~---------~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~  227 (396)
T 4eut_A          157 LTDFGAARELEDDEQ---------FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFE  227 (396)
T ss_dssp             ECCGGGCEECCCGGG---------SSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTT
T ss_pred             EecCCCceEccCCCc---------cccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCC
Confidence            999999987654321         123569999999999875        567889999999999999999999998755


Q ss_pred             CCCchhhhhhhccCCCCC-Cc-------------cCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCc
Q 005221          365 GENKGFLVCKKKMATSPD-GL-------------CCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPI  430 (708)
Q Consensus       365 ~~~~~~~i~~~~~~~~p~-~l-------------~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps  430 (708)
                      .......+........|. .+             ....|..           ..-.+.-...+.+||.+||..||++||+
T Consensus       228 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~-----------~~l~~~~~~~l~~ll~~~L~~dP~~R~s  296 (396)
T 4eut_A          228 GPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVS-----------CSLSRGLQVLLTPVLANILEADQEKCWG  296 (396)
T ss_dssp             CTTTCHHHHHHHHHSCCTTCCEEEECSTTCCEEEESSCCTT-----------CSSCHHHHHHHHHHHHHHSCCCTTTSCC
T ss_pred             cccchHHHHHHHhcCCCcccchhheeccCCCcccCccCCcc-----------cccchHHHhhchHHHHHhhccChhhhcc
Confidence            433222222221111111 10             0000000           0000001246789999999999999999


Q ss_pred             chHHHHhHH
Q 005221          431 STEGAQKLI  439 (708)
Q Consensus       431 ~~e~l~h~~  439 (708)
                      +.|++++..
T Consensus       297 ~~e~l~~l~  305 (396)
T 4eut_A          297 FDQFFAETS  305 (396)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            999988864


No 196
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00  E-value=4.7e-40  Score=354.68  Aligned_cols=275  Identities=23%  Similarity=0.325  Sum_probs=197.5

Q ss_pred             CCCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCC-----------CCCCChHHHHHHHHcCC
Q 005221          137 GSPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKG-----------CNYGPPYEWQVYNTLGG  205 (708)
Q Consensus       137 ~~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~-----------~~~~~~~Ei~il~~L~h  205 (708)
                      ..++|++++.||+|+||.||+|++...       +.++..||||++......           ....+.+|+.++..++|
T Consensus        35 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~-------~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h  107 (345)
T 2v62_A           35 EGNQWVLGKKIGSGGFGLIYLAFPTNK-------PEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDY  107 (345)
T ss_dssp             TSCEEEEEEEC------CEEEEEESSS-------CGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSC
T ss_pred             cCceEEEEeeEeecCCeEEEEEEecCC-------CCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccc
Confidence            357899999999999999999998641       125678999998765321           11224567788888899


Q ss_pred             CCCccEEEEEeee---CCEEEEEEecCCCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCC
Q 005221          206 SHGVPRVHFKGRQ---GDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGP  282 (708)
Q Consensus       206 ~~~v~~~~~~~~~---~~~~~lvme~~ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~  282 (708)
                      +|++..+..+...   ...++||||++|++|.+++...+ .+++..++.|+.||+.||.|||++||+||||||+||||+.
T Consensus       108 ~ni~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~  186 (345)
T 2v62_A          108 LGIPLFYGSGLTEFKGRSYRFMVMERLGIDLQKISGQNG-TFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLGY  186 (345)
T ss_dssp             CCCCCEEEEEEEESSSCEEEEEEEECEEEEHHHHCBGGG-BCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEES
T ss_pred             cCcceeecccccccCCCcEEEEEEeccCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCeeCCCcCHHHEEEcc
Confidence            9977777666543   78999999999999999998765 7999999999999999999999999999999999999987


Q ss_pred             CCCCCCCcEEEeccCccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Q 005221          283 PGTPDEKKLFLVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQG  362 (708)
Q Consensus       283 ~g~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLltG~~Pf~~  362 (708)
                      ++.   ..+||+|||+++.+......... ........+||+.|+|||++.+..++.++|||||||+||+|++|+.||.+
T Consensus       187 ~~~---~~~kL~Dfg~a~~~~~~~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~  262 (345)
T 2v62_A          187 KNP---DQVYLADYGLSYRYCPNGNHKQY-QENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQ  262 (345)
T ss_dssp             SST---TSEEECCCTTCEESSGGGCCCCC-CCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGG
T ss_pred             CCC---CcEEEEeCCCceecccccccccc-hhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccc
Confidence            652   25999999999876543221110 01111346799999999999999999999999999999999999999975


Q ss_pred             CCCCCchhhhhhhccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhH
Q 005221          363 YQGENKGFLVCKKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKL  438 (708)
Q Consensus       363 ~~~~~~~~~i~~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~  438 (708)
                      .................       ..|..+.    .+..  ...  -...+.+||.+||..||++||++.++++.+
T Consensus       263 ~~~~~~~~~~~~~~~~~-------~~~~~~~----~~~~--~~~--~~~~l~~li~~~l~~dp~~Rps~~~l~~~L  323 (345)
T 2v62_A          263 NLKDPVAVQTAKTNLLD-------ELPQSVL----KWAP--SGS--SCCEIAQFLVCAHSLAYDEKPNYQALKKIL  323 (345)
T ss_dssp             GTTCHHHHHHHHHHHHH-------TTTHHHH----HHSC--TTS--CCHHHHHHHHHHHTCCTTCCCCHHHHHHHH
T ss_pred             cccccHHHHHHHHhhcc-------cccHHHH----hhcc--ccc--cHHHHHHHHHHHhhcCcccCCCHHHHHHHH
Confidence            43322222211111100       1111111    1110  001  124788999999999999999999988775


No 197
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00  E-value=1.2e-39  Score=356.82  Aligned_cols=262  Identities=17%  Similarity=0.171  Sum_probs=200.5

Q ss_pred             CCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCC-CCCCChHHHHHHHHc-CCCCCccEEEEE
Q 005221          138 SPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKG-CNYGPPYEWQVYNTL-GGSHGVPRVHFK  215 (708)
Q Consensus       138 ~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~-~~~~~~~Ei~il~~L-~h~~~v~~~~~~  215 (708)
                      .++|+++++||+|+||.||+|++....   +.....+..||||++...... ....+.+|++++++| +|+|+|..+. +
T Consensus        68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~---~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~-~  143 (382)
T 3tt0_A           68 RDRLVLGKPLGEGAFGQVVLAEAIGLD---KDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLG-A  143 (382)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEETSS---TTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEE-E
T ss_pred             hhheEeeeEEecCCCeEEEEEEEcccc---ccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhhee-e
Confidence            358999999999999999999986521   111225678999999765321 223567899999999 7777655555 4


Q ss_pred             eeeCCEEEEEEecC-CCCHHHHHhccC---------------CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEE
Q 005221          216 GRQGDYYVMVMDML-GPSLWDVWNNNS---------------HTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFL  279 (708)
Q Consensus       216 ~~~~~~~~lvme~~-ggsL~~~l~~~~---------------~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NIL  279 (708)
                      +..++.++|||||+ +++|.+++....               ..+++..++.|+.||+.||.|||++|||||||||+|||
T Consensus       144 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIl  223 (382)
T 3tt0_A          144 CTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVL  223 (382)
T ss_dssp             ECSSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEE
T ss_pred             eccCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCEecCCCCcceEE
Confidence            46677799999999 889999998653               35999999999999999999999999999999999999


Q ss_pred             eCCCCCCCCCcEEEeccCccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCC
Q 005221          280 LGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLR-GRL  358 (708)
Q Consensus       280 l~~~g~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLlt-G~~  358 (708)
                      |+.++     .+||+|||+++.........      ......||+.|+|||++.+..++.++|||||||+||+|++ |..
T Consensus       224 l~~~~-----~~kL~DFG~a~~~~~~~~~~------~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~  292 (382)
T 3tt0_A          224 VTEDN-----VMKIADFGLARDIHHIDYYK------KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGS  292 (382)
T ss_dssp             ECTTC-----CEEECSCSCCCCSSCCCTTC------CCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCC
T ss_pred             EcCCC-----cEEEcccCcccccccccccc------cccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCC
Confidence            98877     59999999998765432211      1223458999999999999999999999999999999999 999


Q ss_pred             CCCCCCCCCchhhhhhhccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhH
Q 005221          359 PWQGYQGENKGFLVCKKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKL  438 (708)
Q Consensus       359 Pf~~~~~~~~~~~i~~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~  438 (708)
                      ||.+....+....+.......    .+..++                     ..+.+||.+||..||++||++.|+++++
T Consensus       293 p~~~~~~~~~~~~~~~~~~~~----~~~~~~---------------------~~l~~li~~~l~~dP~~Rps~~ell~~L  347 (382)
T 3tt0_A          293 PYPGVPVEELFKLLKEGHRMD----KPSNCT---------------------NELYMMMRDCWHAVPSQRPTFKQLVEDL  347 (382)
T ss_dssp             SSTTCCHHHHHHHHHTTCCCC----CCSSCC---------------------HHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHcCCCCC----CCccCC---------------------HHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence            998765433332222221111    112233                     4567778888888888888888887775


Q ss_pred             H
Q 005221          439 I  439 (708)
Q Consensus       439 ~  439 (708)
                      -
T Consensus       348 ~  348 (382)
T 3tt0_A          348 D  348 (382)
T ss_dssp             H
T ss_pred             H
Confidence            4


No 198
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00  E-value=1.4e-39  Score=347.85  Aligned_cols=253  Identities=17%  Similarity=0.163  Sum_probs=196.8

Q ss_pred             CCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccE--EEEEEeecC-CCCCCCCChHHHHHHHHc-CCCCCccEEE
Q 005221          138 SPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVE--VALKFEHRS-SKGCNYGPPYEWQVYNTL-GGSHGVPRVH  213 (708)
Q Consensus       138 ~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~--VAlK~~~~~-~~~~~~~~~~Ei~il~~L-~h~~~v~~~~  213 (708)
                      .++|++.+.||+|+||.||+|++..          ++..  ||+|.+... .......+.+|+.+|.+| +|+|++ .+.
T Consensus        24 ~~~y~~~~~lg~G~~g~Vy~~~~~~----------~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv-~~~   92 (327)
T 1fvr_A           24 WNDIKFQDVIGEGNFGQVLKARIKK----------DGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII-NLL   92 (327)
T ss_dssp             GGGCEEEEEEECGGGCEEEEEEEEE----------TTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBC-CEE
T ss_pred             HHHccceeeeecCCCceEEEEEEcc----------CCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchh-hhc
Confidence            3579999999999999999999987          5664  499988754 233345678899999999 666654 555


Q ss_pred             EEeeeCCEEEEEEecC-CCCHHHHHhccC---------------CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCc
Q 005221          214 FKGRQGDYYVMVMDML-GPSLWDVWNNNS---------------HTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPEN  277 (708)
Q Consensus       214 ~~~~~~~~~~lvme~~-ggsL~~~l~~~~---------------~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~N  277 (708)
                      .++...+.+++|||++ +++|.+++....               ..+++..++.++.||+.||.|||++||+||||||+|
T Consensus        93 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~N  172 (327)
T 1fvr_A           93 GACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARN  172 (327)
T ss_dssp             EEEEETTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGG
T ss_pred             eeeeeCCceEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCccCCCCccce
Confidence            5567888999999999 889999997643               469999999999999999999999999999999999


Q ss_pred             EEeCCCCCCCCCcEEEeccCccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHh-C
Q 005221          278 FLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLR-G  356 (708)
Q Consensus       278 ILl~~~g~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLlt-G  356 (708)
                      ||++.++     .+||+|||+++......         ......+|+.|+|||++.+..++.++|||||||+||+|++ |
T Consensus       173 Il~~~~~-----~~kL~Dfg~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g  238 (327)
T 1fvr_A          173 ILVGENY-----VAKIADFGLSRGQEVYV---------KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLG  238 (327)
T ss_dssp             EEECGGG-----CEEECCTTCEESSCEEC---------CC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTS
T ss_pred             EEEcCCC-----eEEEcccCcCccccccc---------cccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCC
Confidence            9998776     59999999997433211         1123457899999999999999999999999999999998 9


Q ss_pred             CCCCCCCCCCCchhhhhhhccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHH
Q 005221          357 RLPWQGYQGENKGFLVCKKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQ  436 (708)
Q Consensus       357 ~~Pf~~~~~~~~~~~i~~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~  436 (708)
                      +.||.+.........+.......    .+..++                     ..+.+||.+||..||.+||++.++++
T Consensus       239 ~~pf~~~~~~~~~~~~~~~~~~~----~~~~~~---------------------~~l~~li~~~l~~dp~~Rps~~ell~  293 (327)
T 1fvr_A          239 GTPYCGMTCAELYEKLPQGYRLE----KPLNCD---------------------DEVYDLMRQCWREKPYERPSFAQILV  293 (327)
T ss_dssp             CCTTTTCCHHHHHHHGGGTCCCC----CCTTBC---------------------HHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCCCCCCcHHHHHHHhhcCCCCC----CCCCCC---------------------HHHHHHHHHHccCChhhCcCHHHHHH
Confidence            99998755433222222111100    111111                     47889999999999999999999999


Q ss_pred             hHHH
Q 005221          437 KLIY  440 (708)
Q Consensus       437 h~~f  440 (708)
                      ++.-
T Consensus       294 ~L~~  297 (327)
T 1fvr_A          294 SLNR  297 (327)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            8753


No 199
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00  E-value=1.8e-40  Score=354.79  Aligned_cols=266  Identities=17%  Similarity=0.204  Sum_probs=200.4

Q ss_pred             CCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCC-CCCCCCChHHHHHHHHcCCCCCccEEEEEe
Q 005221          138 SPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSS-KGCNYGPPYEWQVYNTLGGSHGVPRVHFKG  216 (708)
Q Consensus       138 ~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~-~~~~~~~~~Ei~il~~L~h~~~v~~~~~~~  216 (708)
                      .++|++++.||+|+||.||+|++...     ....++..||||++.... ......+.+|+.+++.|+|+|++..+..+ 
T Consensus        29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~-----~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-  102 (327)
T 2yfx_A           29 RKNITLIRGLGHGAFGEVYEGQVSGM-----PNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVS-  102 (327)
T ss_dssp             GGGCEEEEECC--CSSCEEEEEC-------------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-
T ss_pred             hhheEEEEEEcCCCCeeEEEEEEcCC-----CCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEE-
Confidence            35799999999999999999995320     011267899999986542 12233577899999999998866655554 


Q ss_pred             eeCCEEEEEEecC-CCCHHHHHhccC------CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCC
Q 005221          217 RQGDYYVMVMDML-GPSLWDVWNNNS------HTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEK  289 (708)
Q Consensus       217 ~~~~~~~lvme~~-ggsL~~~l~~~~------~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~  289 (708)
                      .....+++|||++ +++|.+++....      ..+++..++.++.||+.||.|||++||+||||||+|||++.++  ...
T Consensus       103 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~i~H~dlkp~NIli~~~~--~~~  180 (327)
T 2yfx_A          103 LQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPG--PGR  180 (327)
T ss_dssp             CSSSSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSS--TTC
T ss_pred             cCCCCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeecCcCCHhHEEEecCC--Ccc
Confidence            5666789999999 899999998653      3589999999999999999999999999999999999998655  233


Q ss_pred             cEEEeccCccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCCc
Q 005221          290 KLFLVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLR-GRLPWQGYQGENK  368 (708)
Q Consensus       290 ~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLlt-G~~Pf~~~~~~~~  368 (708)
                      .+||+|||+++.........      ......||+.|+|||++.+..++.++|||||||+||+|++ |++||.+......
T Consensus       181 ~~kl~Dfg~~~~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~  254 (327)
T 2yfx_A          181 VAKIGDFGMARDIYRASYYR------KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEV  254 (327)
T ss_dssp             CEEECCCHHHHHHHC------------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHH
T ss_pred             eEEECccccccccccccccc------cCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHHHH
Confidence            69999999998654432211      1223558999999999999999999999999999999998 9999987544333


Q ss_pred             hhhhhhhccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhHHHHh
Q 005221          369 GFLVCKKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKLIYQV  442 (708)
Q Consensus       369 ~~~i~~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~~f~~  442 (708)
                      ...+........    +..+|                     ..+.+||.+||..||.+||++.++++++++..
T Consensus       255 ~~~~~~~~~~~~----~~~~~---------------------~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~  303 (327)
T 2yfx_A          255 LEFVTSGGRMDP----PKNCP---------------------GPVYRIMTQCWQHQPEDRPNFAIILERIEYCT  303 (327)
T ss_dssp             HHHHHTTCCCCC----CTTCC---------------------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHhcCCCCCC----CCCCC---------------------HHHHHHHHHHhcCChhhCcCHHHHHHHHHHHh
Confidence            222222211111    11122                     46789999999999999999999999998653


No 200
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00  E-value=4.6e-40  Score=340.08  Aligned_cols=252  Identities=15%  Similarity=0.141  Sum_probs=200.3

Q ss_pred             CCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCCCCCCChHHHHHHHHcCCCCCccEEEEEee
Q 005221          138 SPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNTLGGSHGVPRVHFKGR  217 (708)
Q Consensus       138 ~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~~~~~~~~Ei~il~~L~h~~~v~~~~~~~~  217 (708)
                      .++|++++.||+|+||.||+|++..           +..||+|++...... ...+.+|+.+++.|+|+|++..+..+ .
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~~~-----------~~~vaiK~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~-~   73 (267)
T 3t9t_A            7 PSELTFVQEIGSGQFGLVHLGYWLN-----------KDKVAIKTIREGAMS-EEDFIEEAEVMMKLSHPKLVQLYGVC-L   73 (267)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETT-----------TEEEEEEEECTTTBC-HHHHHHHHHHHHTCCCTTBCCEEEEE-C
T ss_pred             hhheeeeeEecCCCceeEEEEEecC-----------CCeEEEEEccccCCC-HHHHHHHHHHHHhCCCCCEeeEEEEE-c
Confidence            3579999999999999999999854           578999999865432 24578899999999998866665554 5


Q ss_pred             eCCEEEEEEecC-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcEEEecc
Q 005221          218 QGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDL  296 (708)
Q Consensus       218 ~~~~~~lvme~~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~vkL~DF  296 (708)
                      ..+.+++|||++ +++|.+++......+++..+..++.||+.||.|||++||+||||||+|||++.++     .+||+||
T Consensus        74 ~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nili~~~~-----~~kl~df  148 (267)
T 3t9t_A           74 EQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQ-----VIKVSDF  148 (267)
T ss_dssp             SSSSCEEEECCCTTCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECGGG-----CEEECCT
T ss_pred             cCCCeEEEEeCCCCCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEECCCC-----CEEEccc
Confidence            667799999999 8899999988766799999999999999999999999999999999999998776     5999999


Q ss_pred             CccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCCchhhhhhh
Q 005221          297 GLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLR-GRLPWQGYQGENKGFLVCKK  375 (708)
Q Consensus       297 Gla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLlt-G~~Pf~~~~~~~~~~~i~~~  375 (708)
                      |++........       .......||+.|+|||++.+..++.++|||||||++|+|++ |++||...........+...
T Consensus       149 g~~~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~i~~~  221 (267)
T 3t9t_A          149 GMTRFVLDDQY-------TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTG  221 (267)
T ss_dssp             TGGGGBCCHHH-------HSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTT
T ss_pred             ccccccccccc-------cccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Confidence            99986543211       01122447889999999999999999999999999999999 89999875443332222221


Q ss_pred             ccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhHH
Q 005221          376 KMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKLI  439 (708)
Q Consensus       376 ~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~~  439 (708)
                      ....    .+..+                     ...+.+++.+||..||++||++.++++++-
T Consensus       222 ~~~~----~~~~~---------------------~~~l~~li~~~l~~~p~~Rps~~~ll~~L~  260 (267)
T 3t9t_A          222 FRLY----KPRLA---------------------STHVYQIMNHCWRERPEDRPAFSRLLRQLA  260 (267)
T ss_dssp             CCCC----CCTTS---------------------CHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             CcCC----CCccC---------------------cHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence            1111    11111                     246788899999999999999999988753


No 201
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00  E-value=7.1e-40  Score=355.89  Aligned_cols=259  Identities=19%  Similarity=0.198  Sum_probs=190.9

Q ss_pred             CCCCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCCCCCCChHHHHHHHHcC---CCCCccEE
Q 005221          136 GGSPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNTLG---GSHGVPRV  212 (708)
Q Consensus       136 ~~~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~~~~~~~~Ei~il~~L~---h~~~v~~~  212 (708)
                      ....+|.+.++||+|+||.||+|++...     ....+++.||||++....   ...+..|+++++.|.   |++ |..+
T Consensus        62 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~-----~~~~~~~~vavK~~~~~~---~~~~~~e~~~~~~l~~~~~~~-iv~~  132 (365)
T 3e7e_A           62 LGSKLVYVHHLLGEGAFAQVYEATQGDL-----NDAKNKQKFVLKVQKPAN---PWEFYIGTQLMERLKPSMQHM-FMKF  132 (365)
T ss_dssp             CSSSEEEEEEEEEECSSEEEEEEEC------------CCCCEEEEEESSCC---HHHHHHHHHHHHHSCGGGGGG-BCCE
T ss_pred             ECCEEEEEEEEeeccCCEEEEEEEecCC-----cccccCcEEEEEEeCCCC---hhHHHHHHHHHHHhhhhhhhh-hhhh
Confidence            3457899999999999999999953220     011268899999987543   235678999999998   566 4455


Q ss_pred             EEEeeeCCEEEEEEecC-CCCHHHHHhc----cCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCC----
Q 005221          213 HFKGRQGDYYVMVMDML-GPSLWDVWNN----NSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPP----  283 (708)
Q Consensus       213 ~~~~~~~~~~~lvme~~-ggsL~~~l~~----~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~----  283 (708)
                      +.....++..||||||+ +|+|.+++..    ....+++..++.|+.||+.||+|||++|||||||||+||||+..    
T Consensus       133 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~ivHrDiKp~NIll~~~~~~~  212 (365)
T 3e7e_A          133 YSAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQ  212 (365)
T ss_dssp             EEEEECSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECGGGTCC
T ss_pred             heeeecCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEecccccCc
Confidence            55556677889999999 8999999975    34579999999999999999999999999999999999999871    


Q ss_pred             --CCCCCCcEEEeccCccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCC
Q 005221          284 --GTPDEKKLFLVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQ  361 (708)
Q Consensus       284 --g~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLltG~~Pf~  361 (708)
                        .......+||+|||+|+.+........      ....+||+.|+|||++.+..++.++|||||||+||||++|+.||.
T Consensus       213 ~~~~~~~~~~kl~DFG~a~~~~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~  286 (365)
T 3e7e_A          213 DDEDDLSAGLALIDLGQSIDMKLFPKGTI------FTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKV  286 (365)
T ss_dssp             ------CTTEEECCCTTCEEGGGSCTTEE------ECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCE
T ss_pred             cccccccCCEEEeeCchhhhhhccCCCce------eeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccc
Confidence              000123699999999976543222111      124669999999999999999999999999999999999999997


Q ss_pred             CCCCCCchhhhhhhccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhHH
Q 005221          362 GYQGENKGFLVCKKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKLI  439 (708)
Q Consensus       362 ~~~~~~~~~~i~~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~~  439 (708)
                      ........   ....                           +...+..+.+.+++..||..+|.+|++..+.+.+.+
T Consensus       287 ~~~~~~~~---~~~~---------------------------~~~~~~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l  334 (365)
T 3e7e_A          287 KNEGGECK---PEGL---------------------------FRRLPHLDMWNEFFHVMLNIPDCHHLPSLDLLRQKL  334 (365)
T ss_dssp             EEETTEEE---ECSC---------------------------CTTCSSHHHHHHHHHHHHCCCCTTCCCCHHHHHHHH
T ss_pred             cCCCCcee---echh---------------------------ccccCcHHHHHHHHHHHcCCCCCCcchHHHHHHHHH
Confidence            54322110   0000                           001122345667777788888877776666665544


No 202
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00  E-value=4.4e-40  Score=350.26  Aligned_cols=259  Identities=19%  Similarity=0.188  Sum_probs=200.9

Q ss_pred             CCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCC-CCCCCChHHHHHHHHcCCCCCccEEEEEe
Q 005221          138 SPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSK-GCNYGPPYEWQVYNTLGGSHGVPRVHFKG  216 (708)
Q Consensus       138 ~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~-~~~~~~~~Ei~il~~L~h~~~v~~~~~~~  216 (708)
                      .++|++.+.||+|+||.||+|++...     ....++..||||++..... .....+.+|+.+++.|+|+|++..+..+ 
T Consensus        24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~-----~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-   97 (322)
T 1p4o_A           24 REKITMSRELGQGSFGMVYEGVAKGV-----VKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVV-   97 (322)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEEEEE-----ETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEE-
T ss_pred             hhheeeeeEeccCCceEEEeeeecCc-----cCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEE-
Confidence            35799999999999999999988630     0011578899999875422 1122467899999999999866665554 


Q ss_pred             eeCCEEEEEEecC-CCCHHHHHhccC---------CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCC
Q 005221          217 RQGDYYVMVMDML-GPSLWDVWNNNS---------HTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTP  286 (708)
Q Consensus       217 ~~~~~~~lvme~~-ggsL~~~l~~~~---------~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~  286 (708)
                      ..++.+++|||++ +++|.+++....         ..+++..++.++.||+.||.|||++||+||||||+|||++.++  
T Consensus        98 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~NIli~~~~--  175 (322)
T 1p4o_A           98 SQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDF--  175 (322)
T ss_dssp             CSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECTTC--
T ss_pred             ccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCCCccCCCccceEEEcCCC--
Confidence            6677889999999 789999987532         3579999999999999999999999999999999999999877  


Q ss_pred             CCCcEEEeccCccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCC
Q 005221          287 DEKKLFLVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLR-GRLPWQGYQG  365 (708)
Q Consensus       287 ~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLlt-G~~Pf~~~~~  365 (708)
                         .+||+|||+++.........      ......||+.|+|||++.+..++.++|||||||+||+|++ |..||.+...
T Consensus       176 ---~~kl~Dfg~~~~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~  246 (322)
T 1p4o_A          176 ---TVKIGDFGMTRDIYETDYYR------KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN  246 (322)
T ss_dssp             ---CEEECCTTCCCGGGGGGCEE------GGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCH
T ss_pred             ---eEEECcCccccccccccccc------cccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCH
Confidence               59999999998654432111      1123458999999999999999999999999999999999 8999987654


Q ss_pred             CCchhhhhhhccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhH
Q 005221          366 ENKGFLVCKKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKL  438 (708)
Q Consensus       366 ~~~~~~i~~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~  438 (708)
                      ......+........    +..+|                     ..+.+||.+||..||.+|||+.|+++++
T Consensus       247 ~~~~~~~~~~~~~~~----~~~~~---------------------~~l~~li~~~l~~dp~~Rps~~e~l~~L  294 (322)
T 1p4o_A          247 EQVLRFVMEGGLLDK----PDNCP---------------------DMLFELMRMCWQYNPKMRPSFLEIISSI  294 (322)
T ss_dssp             HHHHHHHHTTCCCCC----CTTCC---------------------HHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             HHHHHHHHcCCcCCC----CCCCC---------------------HHHHHHHHHHcCCCcccCcCHHHHHHHH
Confidence            433333332222111    11222                     4678899999999999999999999885


No 203
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00  E-value=1.3e-39  Score=345.40  Aligned_cols=248  Identities=23%  Similarity=0.341  Sum_probs=193.8

Q ss_pred             CCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCC------CCCCCChHHHHHHHHc----CCCC
Q 005221          138 SPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSK------GCNYGPPYEWQVYNTL----GGSH  207 (708)
Q Consensus       138 ~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~------~~~~~~~~Ei~il~~L----~h~~  207 (708)
                      .++|++++.||+|+||.||+|++..          +++.||||++.....      .....+.+|+.++.++    +|+|
T Consensus        30 ~~~y~~~~~lg~G~~g~Vy~~~~~~----------~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~   99 (312)
T 2iwi_A           30 EAEYRLGPLLGKGGFGTVFAGHRLT----------DRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPG   99 (312)
T ss_dssp             ---CEEEEEEEEETTEEEEEEECTT----------TCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSS
T ss_pred             hhceEEeeEEEcCCCEEEEEEEEcc----------CCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCC
Confidence            3579999999999999999999877          789999999976532      2345678899999999    7887


Q ss_pred             CccEEEEEeeeCCEEEEEEec-C-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeC-CCC
Q 005221          208 GVPRVHFKGRQGDYYVMVMDM-L-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLG-PPG  284 (708)
Q Consensus       208 ~v~~~~~~~~~~~~~~lvme~-~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~-~~g  284 (708)
                      ++..+.. +...+.+++|||+ + +++|.+++...+ .+++..++.++.||+.||.|||++||+||||||+|||++ .++
T Consensus       100 i~~~~~~-~~~~~~~~~v~e~~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~  177 (312)
T 2iwi_A          100 VIRLLDW-FETQEGFMLVLERPLPAQDLFDYITEKG-PLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRG  177 (312)
T ss_dssp             BCCEEEE-C-----CEEEEECCSSEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHHTEECCCCSGGGEEEETTTT
T ss_pred             eeeEEEE-EecCCeEEEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChhhEEEeCCCC
Confidence            6665554 4566778889998 4 899999998765 699999999999999999999999999999999999998 454


Q ss_pred             CCCCCcEEEeccCccccccCCCCCccccccCCCceeeccccccchhhhcCCCCC-chhhHHHHHHHHHHHHhCCCCCCCC
Q 005221          285 TPDEKKLFLVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGS-RRDDLESLAYTLIFLLRGRLPWQGY  363 (708)
Q Consensus       285 ~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s-~~~DIwSlGviL~eLltG~~Pf~~~  363 (708)
                           .+||+|||+++.......          ....||+.|+|||++.+..+. .++|||||||++|+|++|+.||...
T Consensus       178 -----~~kl~dfg~~~~~~~~~~----------~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~  242 (312)
T 2iwi_A          178 -----CAKLIDFGSGALLHDEPY----------TDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERD  242 (312)
T ss_dssp             -----EEEECCCSSCEECCSSCB----------CCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSH
T ss_pred             -----eEEEEEcchhhhcccCcc----------cccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCCh
Confidence                 699999999987655322          134599999999999877764 5999999999999999999999753


Q ss_pred             CCCCchhhhhhhccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhHHHHhc
Q 005221          364 QGENKGFLVCKKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKLIYQVG  443 (708)
Q Consensus       364 ~~~~~~~~i~~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~~f~~~  443 (708)
                      .      .+......     +...++                     ..+.+||.+||..||++||++.|+++|+||+..
T Consensus       243 ~------~~~~~~~~-----~~~~~~---------------------~~~~~li~~~l~~~p~~Rps~~e~l~~~~~~~~  290 (312)
T 2iwi_A          243 Q------EILEAELH-----FPAHVS---------------------PDCCALIRRCLAPKPSSRPSLEEILLDPWMQTP  290 (312)
T ss_dssp             H------HHHHTCCC-----CCTTSC---------------------HHHHHHHHHHTCSSTTTSCCHHHHHHSTTTCC-
T ss_pred             H------HHhhhccC-----CcccCC---------------------HHHHHHHHHHccCChhhCcCHHHHhcChhhcCc
Confidence            1      11111111     111111                     468899999999999999999999999998754


Q ss_pred             c
Q 005221          444 H  444 (708)
Q Consensus       444 ~  444 (708)
                      .
T Consensus       291 ~  291 (312)
T 2iwi_A          291 A  291 (312)
T ss_dssp             -
T ss_pred             h
Confidence            3


No 204
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00  E-value=5.2e-40  Score=350.94  Aligned_cols=262  Identities=17%  Similarity=0.168  Sum_probs=180.9

Q ss_pred             CCCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCC-CCCCChHHHH-HHHHcCCCCCccEEEE
Q 005221          137 GSPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKG-CNYGPPYEWQ-VYNTLGGSHGVPRVHF  214 (708)
Q Consensus       137 ~~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~-~~~~~~~Ei~-il~~L~h~~~v~~~~~  214 (708)
                      ..++|++++.||+|+||.||+|++..          +++.||||++...... ....+..|+. +++.++|+|++..+. 
T Consensus        20 ~~~~y~~~~~lg~G~~g~Vy~~~~~~----------~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~-   88 (327)
T 3aln_A           20 TAEDLKDLGEIGRGAYGSVNKMVHKP----------SGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYG-   88 (327)
T ss_dssp             CSCSEEC-CEEEECSSEEEEEEEETT----------TTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEE-
T ss_pred             CHHHhhehheeccCCCEEEEEEEEcC----------CCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeee-
Confidence            35689999999999999999999977          7899999999765321 1223445665 566677777655554 


Q ss_pred             EeeeCCEEEEEEecCCCCHHHHHhc----cCCCCCHHHHHHHHHHHHHHHHHHHhC-CceecCCCCCcEEeCCCCCCCCC
Q 005221          215 KGRQGDYYVMVMDMLGPSLWDVWNN----NSHTMSIEMVACIAIEAISILEKMHSK-GYVHGDVKPENFLLGPPGTPDEK  289 (708)
Q Consensus       215 ~~~~~~~~~lvme~~ggsL~~~l~~----~~~~l~~~~~~~i~~qil~aL~yLH~~-gIvHrDIKP~NILl~~~g~~~~~  289 (708)
                      +....+.+++|||++.++|.+++..    ....+++..+..++.|++.||.|||++ ||+||||||+|||++.++     
T Consensus        89 ~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~ivH~dlkp~NIll~~~~-----  163 (327)
T 3aln_A           89 ALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSG-----  163 (327)
T ss_dssp             EEECSSEEEEEECCCSEEHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHSCCCSCCCGGGEEEETTT-----
T ss_pred             EEEeCCceEEEEeecCCChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCCEeECCCCHHHEEEcCCC-----
Confidence            4466788999999998899888763    245799999999999999999999999 999999999999998777     


Q ss_pred             cEEEeccCccccccCCCCCccccccCCCceeeccccccchhhh----cCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC
Q 005221          290 KLFLVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAH----LGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQG  365 (708)
Q Consensus       290 ~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~----~~~~~s~~~DIwSlGviL~eLltG~~Pf~~~~~  365 (708)
                      .+||+|||+++........         ....||+.|+|||++    .+..++.++|||||||+||+|++|+.||.+...
T Consensus       164 ~~kl~Dfg~~~~~~~~~~~---------~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~  234 (327)
T 3aln_A          164 NIKLCDFGISGQLVDSIAK---------TRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNS  234 (327)
T ss_dssp             EEEECCCSSSCC---------------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC--
T ss_pred             CEEEccCCCceeccccccc---------ccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcch
Confidence            6999999999876543221         124699999999998    566789999999999999999999999987543


Q ss_pred             CCc-hhhhhhhccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhHHHHhcc
Q 005221          366 ENK-GFLVCKKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKLIYQVGH  444 (708)
Q Consensus       366 ~~~-~~~i~~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~~f~~~~  444 (708)
                      ... ...+........+......+                     ...+.+||.+||..||++||++.++++||||....
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~l~~li~~~l~~dp~~Rps~~ell~hp~~~~~~  293 (327)
T 3aln_A          235 VFDQLTQVVKGDPPQLSNSEEREF---------------------SPSFINFVNLCLTKDESKRPKYKELLKHPFILMYE  293 (327)
T ss_dssp             -----CCCCCSCCCCCCCCSSCCC---------------------CHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHHH
T ss_pred             HHHHHHHHhcCCCCCCCCcccccC---------------------CHHHHHHHHHHhhCChhhCcCHHHHHhChHHHHhH
Confidence            211 11111111000000000111                     24789999999999999999999999999997654


No 205
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=6.3e-40  Score=358.13  Aligned_cols=260  Identities=17%  Similarity=0.231  Sum_probs=194.8

Q ss_pred             CCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCC-CCCCCChHHHHHHHHcCCCCCccEEEEEee
Q 005221          139 PMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSK-GCNYGPPYEWQVYNTLGGSHGVPRVHFKGR  217 (708)
Q Consensus       139 ~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~-~~~~~~~~Ei~il~~L~h~~~v~~~~~~~~  217 (708)
                      ..|++.+.||+|+||.||+|++...       ......||+|.+..... .....+.+|+.++++|+|+|++..+..+..
T Consensus        89 ~~~~~~~~LG~G~fg~Vy~~~~~~~-------~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~  161 (373)
T 3c1x_A           89 LIVHFNEVIGRGHFGCVYHGTLLDN-------DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLR  161 (373)
T ss_dssp             EEEEEEEEEECCSSSEEEEEEEEET-------TTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECC
T ss_pred             ceeecCcEeeeCCCeEEEEEEEECC-------CCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEc
Confidence            3599999999999999999998651       11245789999875422 223457789999999999998888887777


Q ss_pred             eCCEEEEEEecC-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcEEEecc
Q 005221          218 QGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDL  296 (708)
Q Consensus       218 ~~~~~~lvme~~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~vkL~DF  296 (708)
                      .++..++||||+ +++|.+++......+++..++.++.||+.||.|||++||+||||||+||||+.++     .+||+||
T Consensus       162 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~-----~~kL~DF  236 (373)
T 3c1x_A          162 SEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKF-----TVKVADF  236 (373)
T ss_dssp             CSSCCEEEEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTC-----CEEECCC
T ss_pred             CCCCeEEEEECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEecCccchheEEECCCC-----CEEEeec
Confidence            777889999999 8899999988777799999999999999999999999999999999999998877     5999999


Q ss_pred             CccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCCchhhhhhh
Q 005221          297 GLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLR-GRLPWQGYQGENKGFLVCKK  375 (708)
Q Consensus       297 Gla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLlt-G~~Pf~~~~~~~~~~~i~~~  375 (708)
                      |+++..........    .......+|+.|+|||++.+..++.++|||||||+||+|++ |.+||.+.+..+....+...
T Consensus       237 G~a~~~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~~~~~~~  312 (373)
T 3c1x_A          237 GLARDMYDKEFDSV----HNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG  312 (373)
T ss_dssp             -------------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHHHHHHTT
T ss_pred             cccccccccccccc----cccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHHHHHHcC
Confidence            99987654322111    11223458899999999999999999999999999999999 78899887666554444433


Q ss_pred             ccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhHH
Q 005221          376 KMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKLI  439 (708)
Q Consensus       376 ~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~~  439 (708)
                      .....+    ..+|.                     .+.+++.+||..||++||++.|+++++-
T Consensus       313 ~~~~~p----~~~~~---------------------~l~~li~~cl~~dp~~RPs~~ell~~L~  351 (373)
T 3c1x_A          313 RRLLQP----EYCPD---------------------PLYEVMLKCWHPKAEMRPSFSELVSRIS  351 (373)
T ss_dssp             CCCCCC----TTCCH---------------------HHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             CCCCCC----CCCCH---------------------HHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence            322211    23343                     5667777777777877887777777654


No 206
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00  E-value=3.3e-39  Score=336.48  Aligned_cols=245  Identities=18%  Similarity=0.156  Sum_probs=199.8

Q ss_pred             CCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCCCCCCChHHHHHHHHcCCCCCccEEEEEee-
Q 005221          139 PMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNTLGGSHGVPRVHFKGR-  217 (708)
Q Consensus       139 ~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~~~~~~~~Ei~il~~L~h~~~v~~~~~~~~-  217 (708)
                      .+|++++.||+|+||.||+|++..          +++.||+|++....    ..+.+|+++++.|+|+|++..+..+.. 
T Consensus        11 ~~y~~~~~lg~G~~g~V~~~~~~~----------~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~   76 (284)
T 2a19_B           11 MDFKEIELIGSGGFGQVFKAKHRI----------DGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGF   76 (284)
T ss_dssp             HHEEEEEEEECSSSCCEEEEEETT----------TCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEE
T ss_pred             cccceeeeeccCCceEEEEEEEcC----------CCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEecc
Confidence            369999999999999999999976          78999999997653    357899999999999998877765532 


Q ss_pred             --------------eCCEEEEEEecC-CCCHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeC
Q 005221          218 --------------QGDYYVMVMDML-GPSLWDVWNNN-SHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLG  281 (708)
Q Consensus       218 --------------~~~~~~lvme~~-ggsL~~~l~~~-~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~  281 (708)
                                    ....+++||||+ +++|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++
T Consensus        77 ~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~  156 (284)
T 2a19_B           77 DYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLV  156 (284)
T ss_dssp             EEC---------CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEE
T ss_pred             ccCcccccccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCHHHEEEc
Confidence                          356789999999 77999999754 34799999999999999999999999999999999999998


Q ss_pred             CCCCCCCCcEEEeccCccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCC
Q 005221          282 PPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQ  361 (708)
Q Consensus       282 ~~g~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLltG~~Pf~  361 (708)
                      .++     .+||+|||++.........         ....||+.|+|||++.+..++.++|||||||+||+|++|..||.
T Consensus       157 ~~~-----~~kl~Dfg~~~~~~~~~~~---------~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~  222 (284)
T 2a19_B          157 DTK-----QVKIGDFGLVTSLKNDGKR---------TRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAF  222 (284)
T ss_dssp             ETT-----EEEECCCTTCEESSCCSCC---------CCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHH
T ss_pred             CCC-----CEEECcchhheeccccccc---------cccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcch
Confidence            776     6999999999876554221         23459999999999999999999999999999999999998875


Q ss_pred             CCCCCCchhhhhhhccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhHHHH
Q 005221          362 GYQGENKGFLVCKKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKLIYQ  441 (708)
Q Consensus       362 ~~~~~~~~~~i~~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~~f~  441 (708)
                      ....  ....+..   .    .++..++                     ..+.+||.+||..||.+||++.|++++++.-
T Consensus       223 ~~~~--~~~~~~~---~----~~~~~~~---------------------~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~  272 (284)
T 2a19_B          223 ETSK--FFTDLRD---G----IISDIFD---------------------KKEKTLLQKLLSKKPEDRPNTSEILRTLTVW  272 (284)
T ss_dssp             HHHH--HHHHHHT---T----CCCTTSC---------------------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             hHHH--HHHHhhc---c----cccccCC---------------------HHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence            3110  0000000   0    0111111                     4678999999999999999999999998854


No 207
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00  E-value=4.4e-40  Score=354.10  Aligned_cols=270  Identities=18%  Similarity=0.183  Sum_probs=203.7

Q ss_pred             CCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCCCC-----------------CCChHHHHHHH
Q 005221          139 PMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCN-----------------YGPPYEWQVYN  201 (708)
Q Consensus       139 ~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~~~-----------------~~~~~Ei~il~  201 (708)
                      ++|++++.||+|+||.||+|++            +++.||||++........                 ..+.+|+.+++
T Consensus        31 ~~y~~~~~lg~G~~g~V~~~~~------------~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~   98 (348)
T 2pml_X           31 NDYRIIRTLNQGKFNKIILCEK------------DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIIT   98 (348)
T ss_dssp             TTEEEEEEEECCSSCCEEEEEE------------TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHT
T ss_pred             CceEEEEEEcCCCCeEEEEEEc------------CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHH
Confidence            4799999999999999999998            378999999876422111                 45788999999


Q ss_pred             HcCCCCCccEEEEEeeeCCEEEEEEecC-CCCHHHH------Hhcc-CCCCCHHHHHHHHHHHHHHHHHHHh-CCceecC
Q 005221          202 TLGGSHGVPRVHFKGRQGDYYVMVMDML-GPSLWDV------WNNN-SHTMSIEMVACIAIEAISILEKMHS-KGYVHGD  272 (708)
Q Consensus       202 ~L~h~~~v~~~~~~~~~~~~~~lvme~~-ggsL~~~------l~~~-~~~l~~~~~~~i~~qil~aL~yLH~-~gIvHrD  272 (708)
                      .|+|+|++..+..+ ...+.+++||||+ +++|.++      +... ...+++..++.++.||+.||.|||+ +||+|||
T Consensus        99 ~l~h~~i~~~~~~~-~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~d  177 (348)
T 2pml_X           99 DIKNEYCLTCEGII-TNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRD  177 (348)
T ss_dssp             TCCCTTBCCCSEEE-ESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTSCEECCC
T ss_pred             hCCCCCcceEEEEE-eeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccCCEeecC
Confidence            99998866665554 6678899999999 7799998      5542 4579999999999999999999999 9999999


Q ss_pred             CCCCcEEeCCCCCCCCCcEEEeccCccccccCCCCCccccccCCCceeeccccccchhhhcCC-CCCc-hhhHHHHHHHH
Q 005221          273 VKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGR-TGSR-RDDLESLAYTL  350 (708)
Q Consensus       273 IKP~NILl~~~g~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~-~~s~-~~DIwSlGviL  350 (708)
                      |||+|||++.++     .+||+|||++........          ....||+.|+|||++.+. .++. ++|||||||++
T Consensus       178 l~p~Nil~~~~~-----~~kl~dfg~~~~~~~~~~----------~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il  242 (348)
T 2pml_X          178 VKPSNILMDKNG-----RVKLSDFGESEYMVDKKI----------KGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICL  242 (348)
T ss_dssp             CCGGGEEECTTS-----CEEECCCTTCEECBTTEE----------CSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHH
T ss_pred             CChHhEEEcCCC-----cEEEeccccccccccccc----------cCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHH
Confidence            999999998877     599999999987654311          234599999999999887 6666 99999999999


Q ss_pred             HHHHhCCCCCCCCCCCC-chhhhhhhccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCC
Q 005221          351 IFLLRGRLPWQGYQGEN-KGFLVCKKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRP  429 (708)
Q Consensus       351 ~eLltG~~Pf~~~~~~~-~~~~i~~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rp  429 (708)
                      |+|++|+.||....... ....+...... .+......... +......+   ..  ..-...+.+||.+||..||.+||
T Consensus       243 ~~l~~g~~pf~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~-~~~~~~~~---~~--~~~~~~l~~li~~~L~~dP~~Rp  315 (348)
T 2pml_X          243 YVMFYNVVPFSLKISLVELFNNIRTKNIE-YPLDRNHFLYP-LTNKKSTC---SN--NFLSNEDIDFLKLFLRKNPAERI  315 (348)
T ss_dssp             HHHHHSSCSSCCSSCSHHHHHHHTSCCCC-CCCSSSSSTTT-TCC-------------CCCHHHHHHHHHHCCSSGGGSC
T ss_pred             HHHHhCCCCCCCCCcHHHHHHHHhccCcC-Cccchhhhhcc-cccccccc---ch--hhcCHHHHHHHHHHccCChhhCC
Confidence            99999999999765522 22222222111 11110000000 00000000   00  01125789999999999999999


Q ss_pred             cchHHHHhHHHHhc
Q 005221          430 ISTEGAQKLIYQVG  443 (708)
Q Consensus       430 s~~e~l~h~~f~~~  443 (708)
                      ++.|+++||||...
T Consensus       316 s~~e~l~hp~f~~~  329 (348)
T 2pml_X          316 TSEDALKHEWLADT  329 (348)
T ss_dssp             CHHHHHTSGGGTTC
T ss_pred             CHHHHhcCccccCC
Confidence            99999999998754


No 208
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00  E-value=1.4e-39  Score=342.49  Aligned_cols=261  Identities=21%  Similarity=0.222  Sum_probs=195.7

Q ss_pred             CCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCCCCCCChHHHHHHHH--cCCCCCccEEEEE
Q 005221          138 SPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNT--LGGSHGVPRVHFK  215 (708)
Q Consensus       138 ~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~~~~~~~~Ei~il~~--L~h~~~v~~~~~~  215 (708)
                      .++|++++.||+|+||.||+|++            +++.||||++....   ...+.+|.+++..  ++|+|++..+..+
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~------------~~~~vavK~~~~~~---~~~~~~e~~~~~~~~l~h~niv~~~~~~   71 (301)
T 3q4u_A            7 ARDITLLECVGKGRYGEVWRGSW------------QGENVAVKIFSSRD---EKSWFRETELYNTVMLRHENILGFIASD   71 (301)
T ss_dssp             GGGCEEEEEEEECSSEEEEEEEE------------TTEEEEEEEECGGG---HHHHHHHHHHHHHTCCCCTTBCCEEEEE
T ss_pred             cCcEEEEEeeccCCCcEEEEEEE------------CCEEEEEEEecccc---chhhHHHHHHHHHhhccCcCeeeEEEee
Confidence            35799999999999999999987            46889999987542   2234567888877  7899988877765


Q ss_pred             ee---eCCEEEEEEecC-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH--------hCCceecCCCCCcEEeCCC
Q 005221          216 GR---QGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMH--------SKGYVHGDVKPENFLLGPP  283 (708)
Q Consensus       216 ~~---~~~~~~lvme~~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH--------~~gIvHrDIKP~NILl~~~  283 (708)
                      ..   ....+++||||+ +++|.+++...  .+++..++.++.||+.||.|||        ++||+||||||+|||++.+
T Consensus        72 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~  149 (301)
T 3q4u_A           72 MTSRHSSTQLWLITHYHEMGSLYDYLQLT--TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKN  149 (301)
T ss_dssp             EEEETTEEEEEEEECCCTTCBHHHHHTTC--CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTT
T ss_pred             ccccCCCceeEEehhhccCCCHHHHHhhc--ccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCC
Confidence            43   246799999999 88999999653  5999999999999999999999        9999999999999999977


Q ss_pred             CCCCCCcEEEeccCccccccCCCCCccccccCCCceeeccccccchhhhcCC------CCCchhhHHHHHHHHHHHHhC-
Q 005221          284 GTPDEKKLFLVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGR------TGSRRDDLESLAYTLIFLLRG-  356 (708)
Q Consensus       284 g~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~------~~s~~~DIwSlGviL~eLltG-  356 (708)
                      +     .+||+|||+|+..........    ......+||+.|+|||++.+.      .++.++|||||||++|+|++| 
T Consensus       150 ~-----~~kl~Dfg~a~~~~~~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~  220 (301)
T 3q4u_A          150 G-----QCCIADLGLAVMHSQSTNQLD----VGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRM  220 (301)
T ss_dssp             S-----CEEECCCTTCEEEETTTTEEE----CCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTB
T ss_pred             C-----CEEEeeCCCeeeccccccccc----ccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhh
Confidence            7     599999999987655433211    112235799999999999887      455799999999999999999 


Q ss_pred             ---------CCCCCCCCCCCchhhhhhhccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCC
Q 005221          357 ---------RLPWQGYQGENKGFLVCKKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDI  427 (708)
Q Consensus       357 ---------~~Pf~~~~~~~~~~~i~~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~  427 (708)
                               ..||......................  ....|...            ...+....+.+|+.+||..||++
T Consensus       221 ~~~~~~~~~~~pf~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~------------~~~~~~~~l~~li~~cl~~dP~~  286 (301)
T 3q4u_A          221 VSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQ--RPNIPNRW------------FSDPTLTSLAKLMKECWYQNPSA  286 (301)
T ss_dssp             CBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCC--CCCCCGGG------------GGSHHHHHHHHHHHHHCCSSGGG
T ss_pred             cCccccccccccccccCCCCcchhhhhHHHhccCC--CCCCChhh------------ccCccHHHHHHHHHHHhhcChhh
Confidence                     88887654433222211111100000  00001000            00111257899999999999999


Q ss_pred             CCcchHHHHhH
Q 005221          428 RPISTEGAQKL  438 (708)
Q Consensus       428 Rps~~e~l~h~  438 (708)
                      |||+.++++.+
T Consensus       287 Rps~~~i~~~L  297 (301)
T 3q4u_A          287 RLTALRIKKTL  297 (301)
T ss_dssp             SCCHHHHHHHH
T ss_pred             CCCHHHHHHHH
Confidence            99999998874


No 209
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=2.6e-39  Score=339.95  Aligned_cols=258  Identities=16%  Similarity=0.206  Sum_probs=200.2

Q ss_pred             CeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCC-CCCCCChHHHHHHHHcCCCCCccEEEEEeee
Q 005221          140 MYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSK-GCNYGPPYEWQVYNTLGGSHGVPRVHFKGRQ  218 (708)
Q Consensus       140 ~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~-~~~~~~~~Ei~il~~L~h~~~v~~~~~~~~~  218 (708)
                      .|++.++||+|+||.||+|++...       ...+..||+|++..... .....+.+|+.+++.|+|+|++..+..+...
T Consensus        22 ~~~~~~~lg~G~~g~Vy~~~~~~~-------~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~   94 (298)
T 3pls_A           22 VTHSDRVIGKGHFGVVYHGEYIDQ-------AQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPP   94 (298)
T ss_dssp             EEEEEEEEEEETTEEEEEEEEECS-------SSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCS
T ss_pred             EEccCceeccCCCceEEEEEEecC-------CCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecC
Confidence            588899999999999999998661       12455899999875432 1223567899999999999988888877666


Q ss_pred             CCEEEEEEecC-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcEEEeccC
Q 005221          219 GDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLG  297 (708)
Q Consensus       219 ~~~~~lvme~~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~vkL~DFG  297 (708)
                      +...+++||++ +++|.+++......+++..+..++.||+.||.|||++||+||||||+|||++.++     .+||+|||
T Consensus        95 ~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nili~~~~-----~~kl~Dfg  169 (298)
T 3pls_A           95 EGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCMLDESF-----TVKVADFG  169 (298)
T ss_dssp             SSCCEEEECCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTC-----CEEECCTT
T ss_pred             CCCcEEEEecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCC-----cEEeCcCC
Confidence            66668999998 9999999988777899999999999999999999999999999999999998877     59999999


Q ss_pred             ccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCCchhhhhhhc
Q 005221          298 LATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLR-GRLPWQGYQGENKGFLVCKKK  376 (708)
Q Consensus       298 la~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLlt-G~~Pf~~~~~~~~~~~i~~~~  376 (708)
                      +++.........    ........+|+.|+|||.+.+..++.++|||||||++|+|++ |.+||...+..+....+....
T Consensus       170 ~~~~~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~  245 (298)
T 3pls_A          170 LARDILDREYYS----VQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGR  245 (298)
T ss_dssp             SSCTTTTGGGGC----SCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGHHHHHHTTC
T ss_pred             CcccccCCcccc----cccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHHHHHHhhcCC
Confidence            998664432111    111223558999999999999999999999999999999999 555566544433333333222


Q ss_pred             cCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhH
Q 005221          377 MATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKL  438 (708)
Q Consensus       377 ~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~  438 (708)
                      ....    +..++                     ..+.+||.+||..||.+|||+.++++..
T Consensus       246 ~~~~----~~~~~---------------------~~l~~li~~~l~~~p~~Rps~~~ll~~l  282 (298)
T 3pls_A          246 RLPQ----PEYCP---------------------DSLYQVMQQCWEADPAVRPTFRVLVGEV  282 (298)
T ss_dssp             CCCC----CTTCC---------------------HHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             CCCC----Cccch---------------------HHHHHHHHHHccCChhhCcCHHHHHHHH
Confidence            1111    11222                     4677888888888888888888887765


No 210
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00  E-value=1.2e-39  Score=345.74  Aligned_cols=259  Identities=18%  Similarity=0.174  Sum_probs=183.9

Q ss_pred             CCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCCC-CCC-ChHHHHHHHHcCCCCCccEEEEE
Q 005221          138 SPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGC-NYG-PPYEWQVYNTLGGSHGVPRVHFK  215 (708)
Q Consensus       138 ~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~~-~~~-~~~Ei~il~~L~h~~~v~~~~~~  215 (708)
                      .++|++++.||+|+||.||+|++..          +++.||||++....... ... +..+..+++.++|+|++..+. +
T Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~----------~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~-~   92 (318)
T 2dyl_A           24 INDLENLGEMGSGTCGQVWKMRFRK----------TGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFG-T   92 (318)
T ss_dssp             GGGEEEEEEC------CEEEEEETT----------TCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEE-E
T ss_pred             hccccccceeeecCCeeEEEEEEec----------CCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEE-E
Confidence            4579999999999999999999977          78999999997653211 112 223444677778877555554 4


Q ss_pred             eeeCCEEEEEEecCCCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC-CceecCCCCCcEEeCCCCCCCCCcEEEe
Q 005221          216 GRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSK-GYVHGDVKPENFLLGPPGTPDEKKLFLV  294 (708)
Q Consensus       216 ~~~~~~~~lvme~~ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~-gIvHrDIKP~NILl~~~g~~~~~~vkL~  294 (708)
                      +..++.+++|||++++.+..++......+++..++.++.||+.||.|||++ ||+||||||+|||++.++     .+||+
T Consensus        93 ~~~~~~~~lv~e~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dlkp~Nil~~~~~-----~~kl~  167 (318)
T 2dyl_A           93 FITNTDVFIAMELMGTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERG-----QIKLC  167 (318)
T ss_dssp             EECSSEEEEEECCCSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCGGGEEECTTS-----CEEEC
T ss_pred             EecCCcEEEEEeccCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhhCCEEeCCCCHHHEEECCCC-----CEEEE
Confidence            567789999999998777777766556799999999999999999999996 999999999999998877     59999


Q ss_pred             ccCccccccCCCCCccccccCCCceeeccccccchhhhc-----CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCc-
Q 005221          295 DLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHL-----GRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENK-  368 (708)
Q Consensus       295 DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~-----~~~~s~~~DIwSlGviL~eLltG~~Pf~~~~~~~~-  368 (708)
                      |||++........         .....||+.|+|||++.     +..++.++|||||||+||+|++|+.||........ 
T Consensus       168 dfg~~~~~~~~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~  238 (318)
T 2dyl_A          168 DFGISGRLVDDKA---------KDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEV  238 (318)
T ss_dssp             CCTTC-----------------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHH
T ss_pred             ECCCchhccCCcc---------ccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHH
Confidence            9999987654322         12356999999999984     55789999999999999999999999986432211 


Q ss_pred             hhhhhhhccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhHHHHhcc
Q 005221          369 GFLVCKKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKLIYQVGH  444 (708)
Q Consensus       369 ~~~i~~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~~f~~~~  444 (708)
                      ...+........+.  ...+                     ...+.+||.+||..||.+||++.++++||||+...
T Consensus       239 ~~~~~~~~~~~~~~--~~~~---------------------~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~  291 (318)
T 2dyl_A          239 LTKVLQEEPPLLPG--HMGF---------------------SGDFQSFVKDCLTKDHRKRPKYNKLLEHSFIKRYE  291 (318)
T ss_dssp             HHHHHHSCCCCCCS--SSCC---------------------CHHHHHHHHHHTCSCTTTSCCHHHHTTSHHHHHHH
T ss_pred             HHHHhccCCCCCCc--cCCC---------------------CHHHHHHHHHHccCChhHCcCHHHHhhCHHHHhcc
Confidence            11111111100000  0011                     24788999999999999999999999999997543


No 211
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00  E-value=5e-40  Score=351.97  Aligned_cols=269  Identities=15%  Similarity=0.165  Sum_probs=190.4

Q ss_pred             CCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCCCCCCChHHHHH--HHHcCCCCCccEEEEE
Q 005221          138 SPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQV--YNTLGGSHGVPRVHFK  215 (708)
Q Consensus       138 ~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~~~~~~~~Ei~i--l~~L~h~~~v~~~~~~  215 (708)
                      .++|++++.||+|+||.||+|++            +++.||||++.....   ..+..|.++  +..++|+|++..+..+
T Consensus        12 ~~~y~~~~~lg~G~~g~Vy~~~~------------~~~~vavK~~~~~~~---~~~~~e~~~~~~~~~~h~~i~~~~~~~   76 (336)
T 3g2f_A           12 LDNLKLLELIGRGRYGAVYKGSL------------DERPVAVKVFSFANR---QNFINEKNIYRVPLMEHDNIARFIVGD   76 (336)
T ss_dssp             TTSEEEEEEEEECSSEEEEEEEE------------TTEEEEEEEEEGGGH---HHHHHHHHHHTSTTCCCTTBCCEEEEE
T ss_pred             hHHhheeeecccCCCeEEEEEEE------------CCeEEEEEEeeccch---hhHHHHHHHHHHHhccCcchhhheecc
Confidence            35799999999999999999976            568999999975432   123334444  4458999988877543


Q ss_pred             e----eeCCEEEEEEecC-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC---------CceecCCCCCcEEeC
Q 005221          216 G----RQGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSK---------GYVHGDVKPENFLLG  281 (708)
Q Consensus       216 ~----~~~~~~~lvme~~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~---------gIvHrDIKP~NILl~  281 (708)
                      .    .....++|||||+ +++|.+++....  +++..++.|+.||+.||.|||++         |||||||||+||||+
T Consensus        77 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~  154 (336)
T 3g2f_A           77 ERVTADGRMEYLLVMEYYPNGSLXKYLSLHT--SDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVK  154 (336)
T ss_dssp             EEECTTSCEEEEEEECCCTTCBHHHHHHHCC--BCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEEC
T ss_pred             cccccCCCceEEEEEecCCCCcHHHHHhhcc--cchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEc
Confidence            2    3344789999999 899999997754  68999999999999999999999         999999999999998


Q ss_pred             CCCCCCCCcEEEeccCccccccCCCCCccccccCCCceeeccccccchhhhcC-------CCCCchhhHHHHHHHHHHHH
Q 005221          282 PPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLG-------RTGSRRDDLESLAYTLIFLL  354 (708)
Q Consensus       282 ~~g~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~-------~~~s~~~DIwSlGviL~eLl  354 (708)
                      .++     .+||+|||+++.+..................+||+.|+|||++.+       ..++.++|||||||+||||+
T Consensus       155 ~~~-----~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell  229 (336)
T 3g2f_A          155 NDG-----TCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIF  229 (336)
T ss_dssp             TTS-----CEEECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCC-----cEEEeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHH
Confidence            877     599999999987765432211111122234569999999999987       45678999999999999999


Q ss_pred             hCCCCCCCCCCCCchhhhhhhccCCCCCCccCCCChHHHHHHHHHHcCCCCCcc-----------cHHHHHHHHHhhhCC
Q 005221          355 RGRLPWQGYQGENKGFLVCKKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEP-----------NYAKYISLFDGIVGP  423 (708)
Q Consensus       355 tG~~Pf~~~~~~~~~~~i~~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP-----------~~~~l~~LL~~mL~~  423 (708)
                      +|..||....................+         .+..+......  ...+|           ....+.+||.+||..
T Consensus       230 ~g~~p~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~  298 (336)
T 3g2f_A          230 MRCTDLFPGESVPEYQMAFQTEVGNHP---------TFEDMQVLVSR--EKQRPKFPEAWKENSLAVRSLKETIEDCWDQ  298 (336)
T ss_dssp             TTBGGGSTTSCCCCCCCTTHHHHCSSC---------CHHHHHHHHTT--SCCCCCCCTTCCCCSHHHHHHHHHHHHHSCS
T ss_pred             hcCCcCCCccchhHHHHhhhcccCCCc---------hHHHHHhhhcc--cccCCCCCcccccccchHHHHHHHHHHHhcC
Confidence            997666543322211111111111000         01111111111  11111           123699999999999


Q ss_pred             CCCCCCcchHHHHhHH
Q 005221          424 NPDIRPISTEGAQKLI  439 (708)
Q Consensus       424 dP~~Rps~~e~l~h~~  439 (708)
                      ||++|||+.|+++.+-
T Consensus       299 dP~~Rps~~e~l~~L~  314 (336)
T 3g2f_A          299 DAEARLTAQXAEERMA  314 (336)
T ss_dssp             SGGGSCCHHHHHHHHH
T ss_pred             ChhhCcchHHHHHHHH
Confidence            9999999999987653


No 212
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00  E-value=2.6e-39  Score=342.34  Aligned_cols=261  Identities=18%  Similarity=0.183  Sum_probs=202.5

Q ss_pred             CCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCC-CCCCCChHHHHHHHHc-CCCCCccEEEEE
Q 005221          138 SPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSK-GCNYGPPYEWQVYNTL-GGSHGVPRVHFK  215 (708)
Q Consensus       138 ~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~-~~~~~~~~Ei~il~~L-~h~~~v~~~~~~  215 (708)
                      .++|++.+.||+|+||.||+|++...     ....+++.||||++..... .....+.+|+.++++| +|+|++..+. +
T Consensus        22 ~~~y~~~~~lg~G~~g~V~~~~~~~~-----~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~-~   95 (313)
T 1t46_A           22 RNRLSFGKTLGAGAFGKVVEATAYGL-----IKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLG-A   95 (313)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESS-----SSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEE-E
T ss_pred             hhhhhHHHhhCccCCcceEEEEEeec-----cccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEE-E
Confidence            45899999999999999999997431     1122678999999976532 1224577899999999 7777655554 4


Q ss_pred             eeeCCEEEEEEecC-CCCHHHHHhccCC-----------------CCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCc
Q 005221          216 GRQGDYYVMVMDML-GPSLWDVWNNNSH-----------------TMSIEMVACIAIEAISILEKMHSKGYVHGDVKPEN  277 (708)
Q Consensus       216 ~~~~~~~~lvme~~-ggsL~~~l~~~~~-----------------~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~N  277 (708)
                      ...++..++|||++ +++|.+++.....                 .+++..++.++.||+.||.|||++||+||||||+|
T Consensus        96 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~N  175 (313)
T 1t46_A           96 CTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARN  175 (313)
T ss_dssp             ECSSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGG
T ss_pred             EecCCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccce
Confidence            46677789999999 8899999976542                 48999999999999999999999999999999999


Q ss_pred             EEeCCCCCCCCCcEEEeccCccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHh-C
Q 005221          278 FLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLR-G  356 (708)
Q Consensus       278 ILl~~~g~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLlt-G  356 (708)
                      ||++.++     .+||+|||+++..........      .....||+.|+|||++.+..++.++|||||||+||+|++ |
T Consensus       176 il~~~~~-----~~kl~Dfg~~~~~~~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g  244 (313)
T 1t46_A          176 ILLTHGR-----ITKICDFGLARDIKNDSNYVV------KGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLG  244 (313)
T ss_dssp             EEEETTT-----EEEECCCGGGSCTTSCTTSEE------CSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTT
T ss_pred             EEEcCCC-----CEEEcccccccccccccccee------ccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCC
Confidence            9998777     699999999987665432111      123458899999999999999999999999999999999 9


Q ss_pred             CCCCCCCCCCCchhhhhhhccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHH
Q 005221          357 RLPWQGYQGENKGFLVCKKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQ  436 (708)
Q Consensus       357 ~~Pf~~~~~~~~~~~i~~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~  436 (708)
                      +.||.+..................   .+..+|                     ..+.+||.+||..||.+|||+.|+++
T Consensus       245 ~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~---------------------~~l~~li~~~l~~dp~~Rps~~ell~  300 (313)
T 1t46_A          245 SSPYPGMPVDSKFYKMIKEGFRML---SPEHAP---------------------AEMYDIMKTCWDADPLKRPTFKQIVQ  300 (313)
T ss_dssp             CCSSTTCCSSHHHHHHHHHTCCCC---CCTTSC---------------------HHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCCCCcccchhHHHHHhccCCCCC---CcccCC---------------------HHHHHHHHHHcCCCchhCcCHHHHHH
Confidence            999988655443333332221111   111122                     46788888999999999999998888


Q ss_pred             hHH
Q 005221          437 KLI  439 (708)
Q Consensus       437 h~~  439 (708)
                      ++-
T Consensus       301 ~L~  303 (313)
T 1t46_A          301 LIE  303 (313)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            753


No 213
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00  E-value=3.8e-40  Score=359.79  Aligned_cols=258  Identities=17%  Similarity=0.172  Sum_probs=187.1

Q ss_pred             CCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCC-CCCCCChHHHHHHHHcCCCCCccEEEEEe
Q 005221          138 SPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSK-GCNYGPPYEWQVYNTLGGSHGVPRVHFKG  216 (708)
Q Consensus       138 ~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~-~~~~~~~~Ei~il~~L~h~~~v~~~~~~~  216 (708)
                      ..+|++.+.||+|+||.||+|++...       +..+..||||+++.... .....+.+|+.+|++|+|+|++..+..+ 
T Consensus        44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~-------~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~-  115 (373)
T 2qol_A           44 ATNISIDKVVGAGEFGEVCSGRLKLP-------SKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVV-  115 (373)
T ss_dssp             GGGCCCCEEEEECSSSEEEEC-CBCT-------TSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-
T ss_pred             HhhceeeeEEeeCCCeEEEEEEEecC-------CCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEE-
Confidence            34799999999999999999988631       12577899999876422 1233577899999999999866665554 


Q ss_pred             eeCCEEEEEEecC-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcEEEec
Q 005221          217 RQGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVD  295 (708)
Q Consensus       217 ~~~~~~~lvme~~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~vkL~D  295 (708)
                      ..++.++|||||+ +++|.+++...+..+++..++.++.||+.||.|||++||+||||||+|||++.++     .+||+|
T Consensus       116 ~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~-----~~kl~D  190 (373)
T 2qol_A          116 TKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNL-----VCKVSD  190 (373)
T ss_dssp             CSSSSCEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTC-----CEEECC
T ss_pred             eeCCceEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEEcCCC-----CEEECc
Confidence            6677899999999 8999999988776899999999999999999999999999999999999998877     599999


Q ss_pred             cCccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCCchhhhhh
Q 005221          296 LGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLR-GRLPWQGYQGENKGFLVCK  374 (708)
Q Consensus       296 FGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLlt-G~~Pf~~~~~~~~~~~i~~  374 (708)
                      ||+++..........     ......+|+.|+|||++.+..++.++|||||||+||||++ |+.||.+....+....+..
T Consensus       191 fg~a~~~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~~~~~i~~  265 (373)
T 2qol_A          191 FGLGRVLEDDPEAAY-----TTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDE  265 (373)
T ss_dssp             C---------------------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHHHHHHHHT
T ss_pred             CccccccccCCccce-----eccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc
Confidence            999987654322111     1112346789999999999999999999999999999998 9999987654443333332


Q ss_pred             hccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhH
Q 005221          375 KKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKL  438 (708)
Q Consensus       375 ~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~  438 (708)
                      ....+.+    ..+|                     ..+.+|+.+||..||++||++.++++.+
T Consensus       266 ~~~~~~~----~~~~---------------------~~l~~li~~cl~~dp~~RPs~~~i~~~L  304 (373)
T 2qol_A          266 GYRLPPP----MDCP---------------------AALYQLMLDCWQKDRNNRPKFEQIVSIL  304 (373)
T ss_dssp             TEECCCC----TTCB---------------------HHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             CCCCCCC----cccc---------------------HHHHHHHHHHhCcChhhCcCHHHHHHHH
Confidence            2211111    1233                     3566777777777777777777776654


No 214
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00  E-value=1.5e-39  Score=340.25  Aligned_cols=252  Identities=19%  Similarity=0.189  Sum_probs=202.1

Q ss_pred             CCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCCCCCCChHHHHHHHHcCCCCCccEEEEEee
Q 005221          138 SPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNTLGGSHGVPRVHFKGR  217 (708)
Q Consensus       138 ~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~~~~~~~~Ei~il~~L~h~~~v~~~~~~~~  217 (708)
                      ..+|++.+.||+|+||.||+|++..          ++..||+|++..... ....+.+|+.+++.|+|+|++..+..+ .
T Consensus        12 ~~~~~~~~~lg~G~~g~V~~~~~~~----------~~~~vaiK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~-~   79 (288)
T 3kfa_A           12 RTDITMKHKLGGGQYGEVYEGVWKK----------YSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVC-T   79 (288)
T ss_dssp             GGGEEEEEESGGGTTCSEEEEEEGG----------GTEEEEEEEECSCST-HHHHHHHHHHHHHHCCCTTBCCEEEEE-C
T ss_pred             ccceeEEeecCCCCceeEEEeEecC----------CCEEEEEEecCcCHH-HHHHHHHHHHHHHhCCCCCEeeEEEEE-c
Confidence            4579999999999999999999987          789999999875432 234577899999999998876666554 6


Q ss_pred             eCCEEEEEEecC-CCCHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcEEEec
Q 005221          218 QGDYYVMVMDML-GPSLWDVWNNN-SHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVD  295 (708)
Q Consensus       218 ~~~~~~lvme~~-ggsL~~~l~~~-~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~vkL~D  295 (708)
                      ..+.+++|||++ |++|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++.++     .+||+|
T Consensus        80 ~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~-----~~~l~D  154 (288)
T 3kfa_A           80 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENH-----LVKVAD  154 (288)
T ss_dssp             SSSSEEEEEECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHTCCCSCCSGGGEEECGGG-----CEEECC
T ss_pred             cCCCEEEEEEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHCCccCCCCCcceEEEcCCC-----CEEEcc
Confidence            667789999999 79999999864 34699999999999999999999999999999999999998776     599999


Q ss_pred             cCccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCCchhhhhh
Q 005221          296 LGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLR-GRLPWQGYQGENKGFLVCK  374 (708)
Q Consensus       296 FGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLlt-G~~Pf~~~~~~~~~~~i~~  374 (708)
                      ||++..........       .....+|+.|+|||++.+..++.++|||||||++|+|++ |.+||.+.........+..
T Consensus       155 fg~~~~~~~~~~~~-------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~~~~~~~  227 (288)
T 3kfa_A          155 FGLSRLMTGDTYTA-------HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK  227 (288)
T ss_dssp             CCGGGTSCSSSSEE-------ETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHT
T ss_pred             CccceeccCCcccc-------ccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhc
Confidence            99998765433211       123458899999999999999999999999999999999 9999988655443333322


Q ss_pred             hccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhH
Q 005221          375 KKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKL  438 (708)
Q Consensus       375 ~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~  438 (708)
                      ......    +..+|                     ..+.+||.+||..||.+||++.++++..
T Consensus       228 ~~~~~~----~~~~~---------------------~~l~~li~~~l~~dp~~Rps~~~~~~~l  266 (288)
T 3kfa_A          228 DYRMER----PEGCP---------------------EKVYELMRACWQWNPSDRPSFAEIHQAF  266 (288)
T ss_dssp             TCCCCC----CTTCC---------------------HHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             cCCCCC----CCCCC---------------------HHHHHHHHHHhCCChhhCcCHHHHHHHH
Confidence            211111    11222                     4678888889999999999988887764


No 215
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00  E-value=1.6e-39  Score=364.13  Aligned_cols=250  Identities=18%  Similarity=0.205  Sum_probs=194.1

Q ss_pred             CCCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCCCCCCChHHHHHHHHcCCCCCccEEEEEe
Q 005221          137 GSPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNTLGGSHGVPRVHFKG  216 (708)
Q Consensus       137 ~~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~~~~~~~~Ei~il~~L~h~~~v~~~~~~~  216 (708)
                      ..++|++.+.||+|+||.||+|++..           +..||||+++.... ....+.+|+.+|+.|+|+|+|..+..+ 
T Consensus       186 ~~~~~~~~~~lG~G~fg~V~~~~~~~-----------~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~iv~l~~~~-  252 (454)
T 1qcf_A          186 PRESLKLEKKLGAGQFGEVWMATYNK-----------HTKVAVKTMKPGSM-SVEAFLAEANVMKTLQHDKLVKLHAVV-  252 (454)
T ss_dssp             CGGGEEEEEEEECCSSEEEEEEEETT-----------TEEEEEEEECTTSB-CHHHHHHHHHHHTTCCCTTBCCEEEEE-
T ss_pred             chHHeEEEEEcccCCceEEEEEEECC-----------ccEEEEEEecCCCc-cHHHHHHHHHHHhhCCCCCEeeEEEEE-
Confidence            34679999999999999999998843           57899999976532 244678999999999999987776655 


Q ss_pred             eeCCEEEEEEecC-CCCHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcEEEe
Q 005221          217 RQGDYYVMVMDML-GPSLWDVWNNNS-HTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLV  294 (708)
Q Consensus       217 ~~~~~~~lvme~~-ggsL~~~l~~~~-~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~vkL~  294 (708)
                      . .+.++|||||+ +|+|.+++.... ..+++..+..++.||+.||.|||++|||||||||+||||+.++     .+||+
T Consensus       253 ~-~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~-----~~kl~  326 (454)
T 1qcf_A          253 T-KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASL-----VCKIA  326 (454)
T ss_dssp             C-SSSCEEEECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTC-----CEEEC
T ss_pred             e-CCccEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEECCCC-----cEEEe
Confidence            3 55689999999 899999997542 3689999999999999999999999999999999999999877     59999


Q ss_pred             ccCccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCCchhhhh
Q 005221          295 DLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLR-GRLPWQGYQGENKGFLVC  373 (708)
Q Consensus       295 DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLlt-G~~Pf~~~~~~~~~~~i~  373 (708)
                      |||+++.......       .......+|+.|+|||++.+..++.++|||||||+||||++ |++||.+....+....+.
T Consensus       327 DFG~a~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~  399 (454)
T 1qcf_A          327 DFGLARVIEDNEY-------TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALE  399 (454)
T ss_dssp             STTGGGGBCCHHH-------HTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHH
T ss_pred             eCCCceEcCCCce-------eccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Confidence            9999987643211       01112347889999999999999999999999999999999 999999866544444443


Q ss_pred             hhccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHh
Q 005221          374 KKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQK  437 (708)
Q Consensus       374 ~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h  437 (708)
                      .....+.    +..+|.                     .+.+||.+||..||++|||+.+++..
T Consensus       400 ~~~~~~~----~~~~~~---------------------~l~~li~~cl~~dp~~RPt~~~i~~~  438 (454)
T 1qcf_A          400 RGYRMPR----PENCPE---------------------ELYNIMMRCWKNRPEERPTFEYIQSV  438 (454)
T ss_dssp             HTCCCCC----CTTSCH---------------------HHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             cCCCCCC----CCCCCH---------------------HHHHHHHHHccCChhHCcCHHHHHHH
Confidence            3322111    223444                     45566666666666666666665544


No 216
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00  E-value=1.6e-39  Score=338.93  Aligned_cols=246  Identities=19%  Similarity=0.203  Sum_probs=191.2

Q ss_pred             CCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCCCCCCChHHHHHHHHcCCCCCccEEEEEee
Q 005221          138 SPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNTLGGSHGVPRVHFKGR  217 (708)
Q Consensus       138 ~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~~~~~~~~Ei~il~~L~h~~~v~~~~~~~~  217 (708)
                      .++|++++.||+|+||.||+|++            .++.||+|++....  ....+.+|+.+++.|+|+|++..+..+..
T Consensus        20 ~~~y~~~~~lg~G~~g~V~~~~~------------~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~   85 (278)
T 1byg_A           20 MKELKLLQTIGKGEFGDVMLGDY------------RGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVE   85 (278)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEE------------TTEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECC
T ss_pred             hhhceEEeEEecCCCceEEEEEE------------cCCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEc
Confidence            45799999999999999999987            46889999987543  23457789999999999998888887766


Q ss_pred             eCCEEEEEEecC-CCCHHHHHhccCC-CCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcEEEec
Q 005221          218 QGDYYVMVMDML-GPSLWDVWNNNSH-TMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVD  295 (708)
Q Consensus       218 ~~~~~~lvme~~-ggsL~~~l~~~~~-~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~vkL~D  295 (708)
                      ..+.+++|||++ +++|.+++...+. .+++..++.++.||+.||.|||++||+||||||+|||++.++     .+||+|
T Consensus        86 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~-----~~~l~D  160 (278)
T 1byg_A           86 EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDN-----VAKVSD  160 (278)
T ss_dssp             C--CCEEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTS-----CEEECC
T ss_pred             CCCceEEEEecCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhCCccccCCCcceEEEeCCC-----cEEEee
Confidence            667899999999 7799999976532 389999999999999999999999999999999999998777     599999


Q ss_pred             cCccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCCchhhhhh
Q 005221          296 LGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLR-GRLPWQGYQGENKGFLVCK  374 (708)
Q Consensus       296 FGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLlt-G~~Pf~~~~~~~~~~~i~~  374 (708)
                      ||++.......           ....+|+.|+|||++.+..++.++|||||||++|+|++ |++||......+....+..
T Consensus       161 fg~~~~~~~~~-----------~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~  229 (278)
T 1byg_A          161 FGLTKEASSTQ-----------DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEK  229 (278)
T ss_dssp             CCC-----------------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTT
T ss_pred             ccccccccccc-----------cCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhc
Confidence            99998654322           12348999999999999999999999999999999998 9999987654443333322


Q ss_pred             hccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhH
Q 005221          375 KKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKL  438 (708)
Q Consensus       375 ~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~  438 (708)
                      ...    ...+..+|                     ..+.++|.+||..||.+||++.|+++.+
T Consensus       230 ~~~----~~~~~~~~---------------------~~l~~li~~~l~~~p~~Rps~~~l~~~L  268 (278)
T 1byg_A          230 GYK----MDAPDGCP---------------------PAVYEVMKNCWHLDAAMRPSFLQLREQL  268 (278)
T ss_dssp             TCC----CCCCTTCC---------------------HHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             CCC----CCCcccCC---------------------HHHHHHHHHHhcCChhhCCCHHHHHHHH
Confidence            211    11122233                     3677888888888888888888887664


No 217
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00  E-value=1.1e-39  Score=347.92  Aligned_cols=268  Identities=19%  Similarity=0.175  Sum_probs=201.2

Q ss_pred             CCCCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCC-CCCCChHHHHHHHHcCCCCCccEEEE
Q 005221          136 GGSPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKG-CNYGPPYEWQVYNTLGGSHGVPRVHF  214 (708)
Q Consensus       136 ~~~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~-~~~~~~~Ei~il~~L~h~~~v~~~~~  214 (708)
                      ...++|++.+.||+|+||.||+|++.           +++.||||++...... ....+.+|+.+++.++|+|++..+..
T Consensus        27 ~~~~~y~~~~~lg~G~~g~V~~~~~~-----------~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~   95 (326)
T 3uim_A           27 VASDNFSNKNILGRGGFGKVYKGRLA-----------DGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGF   95 (326)
T ss_dssp             TTTTSSCSTTEEECCSSSEEEEECCS-----------SSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEE
T ss_pred             HHhhccccceeEecCCCcEEEEEEec-----------CCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEE
Confidence            34578999999999999999999753           4788999998765322 23357899999999999987766665


Q ss_pred             EeeeCCEEEEEEecC-CCCHHHHHhccC---CCCCHHHHHHHHHHHHHHHHHHHhC---CceecCCCCCcEEeCCCCCCC
Q 005221          215 KGRQGDYYVMVMDML-GPSLWDVWNNNS---HTMSIEMVACIAIEAISILEKMHSK---GYVHGDVKPENFLLGPPGTPD  287 (708)
Q Consensus       215 ~~~~~~~~~lvme~~-ggsL~~~l~~~~---~~l~~~~~~~i~~qil~aL~yLH~~---gIvHrDIKP~NILl~~~g~~~  287 (708)
                      + ...+..++||||+ +++|.+++....   ..+++..+..|+.||+.||.|||++   ||+||||||+|||++.++   
T Consensus        96 ~-~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~---  171 (326)
T 3uim_A           96 C-MTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEF---  171 (326)
T ss_dssp             E-CCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTC---
T ss_pred             E-ecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCC---
Confidence            5 5667788999999 889999998653   3499999999999999999999999   999999999999998877   


Q ss_pred             CCcEEEeccCccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC---
Q 005221          288 EKKLFLVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQ---  364 (708)
Q Consensus       288 ~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLltG~~Pf~~~~---  364 (708)
                        .+||+|||+++.........       ....+||+.|+|||++.+..++.++|||||||++|+|++|+.||....   
T Consensus       172 --~~kl~Dfg~~~~~~~~~~~~-------~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~  242 (326)
T 3uim_A          172 --EAVVGDFGLAKLMDYKDTHV-------TTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLAN  242 (326)
T ss_dssp             --CEEECCCSSCEECCSSSSCE-------ECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTT
T ss_pred             --CEEeccCccccccCcccccc-------cccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCccccccccc
Confidence              59999999998765433221       123559999999999999999999999999999999999999996321   


Q ss_pred             -CCCchhhhhhhccCCCCCCccCCCChHHHHHHHHHHcCCCC-CcccHHHHHHHHHhhhCCCCCCCCcchHHHHhHH
Q 005221          365 -GENKGFLVCKKKMATSPDGLCCFCPAPFRQFVEYVVNLKFD-EEPNYAKYISLFDGIVGPNPDIRPISTEGAQKLI  439 (708)
Q Consensus       365 -~~~~~~~i~~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~-~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~~  439 (708)
                       ..............  ...+......          ..... .......+.+|+.+||..||.+|||+.|+++|+.
T Consensus       243 ~~~~~~~~~~~~~~~--~~~~~~~~~~----------~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~  307 (326)
T 3uim_A          243 DDDVMLLDWVKGLLK--EKKLEALVDV----------DLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE  307 (326)
T ss_dssp             TSCSBHHHHHTTTTS--SCCSTTSSCT----------TCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHH
T ss_pred             ccchhHHHHHHHHhh--chhhhhhcCh----------hhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhc
Confidence             11111111111100  0000000000          00000 0112357999999999999999999999999986


No 218
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00  E-value=3.3e-39  Score=342.54  Aligned_cols=251  Identities=24%  Similarity=0.280  Sum_probs=183.6

Q ss_pred             CCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCC---CCCCChHHHHHHHHcCCCCCccEEEEE
Q 005221          139 PMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKG---CNYGPPYEWQVYNTLGGSHGVPRVHFK  215 (708)
Q Consensus       139 ~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~---~~~~~~~Ei~il~~L~h~~~v~~~~~~  215 (708)
                      ++|++++.||+|+||.||+|++..          +++.||||++......   ....+.+|+.+++.|+|+|++..+. +
T Consensus        34 ~~y~~~~~lg~G~~g~Vy~~~~~~----------~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~-~  102 (309)
T 2h34_A           34 GPYRLRRLVGRGGMGDVYEAEDTV----------RERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHD-F  102 (309)
T ss_dssp             CCEEEEEEEEECSSSEEEEEEETT----------TTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEE-E
T ss_pred             ccEEEEEEEcCCCCeeEEEEEEcC----------CCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEE-E
Confidence            479999999999999999999977          7899999998765322   1235678999999999988666554 4


Q ss_pred             eeeCCEEEEEEecC-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcEEEe
Q 005221          216 GRQGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLV  294 (708)
Q Consensus       216 ~~~~~~~~lvme~~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~vkL~  294 (708)
                      +..++.+++|||++ +++|.+++...+ .+++..++.++.||+.||.|||++||+||||||+|||++.++     .+||+
T Consensus       103 ~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~NIl~~~~~-----~~kl~  176 (309)
T 2h34_A          103 GEIDGQLYVDMRLINGVDLAAMLRRQG-PLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVSADD-----FAYLV  176 (309)
T ss_dssp             EEETTEEEEEEECCCCEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTS-----CEEEC
T ss_pred             EeeCCeEEEEEEecCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCcCCcCCCChHHEEEcCCC-----CEEEe
Confidence            56788999999999 789999998764 699999999999999999999999999999999999998877     59999


Q ss_pred             ccCccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhh
Q 005221          295 DLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCK  374 (708)
Q Consensus       295 DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLltG~~Pf~~~~~~~~~~~i~~  374 (708)
                      |||++.........       ......||+.|+|||++.+..++.++|||||||+||+|++|+.||.+...... .....
T Consensus       177 Dfg~~~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~~~  248 (309)
T 2h34_A          177 DFGIASATTDEKLT-------QLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLSVM-GAHIN  248 (309)
T ss_dssp             SCCC-----------------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHHHH-HHHHH
T ss_pred             cCccCccccccccc-------cccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHHHH-HHHhc
Confidence            99999876543211       11235699999999999999999999999999999999999999987543211 11111


Q ss_pred             hccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCC-cchHHHH
Q 005221          375 KKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRP-ISTEGAQ  436 (708)
Q Consensus       375 ~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rp-s~~e~l~  436 (708)
                       .....+..+...+|.                     .+.+||.+||..||++|| ++.++++
T Consensus       249 -~~~~~~~~~~~~~~~---------------------~l~~li~~~l~~dP~~Rp~s~~~l~~  289 (309)
T 2h34_A          249 -QAIPRPSTVRPGIPV---------------------AFDAVIARGMAKNPEDRYVTCGDLSA  289 (309)
T ss_dssp             -SCCCCGGGTSTTCCT---------------------HHHHHHHHHTCSSGGGSCSSHHHHHH
T ss_pred             -cCCCCccccCCCCCH---------------------HHHHHHHHhccCCHHHHHHhHHHHHH
Confidence             111111222223333                     566777777777777777 4444443


No 219
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00  E-value=1e-38  Score=338.13  Aligned_cols=257  Identities=22%  Similarity=0.214  Sum_probs=186.8

Q ss_pred             CCCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCC---CCCCChHHHHHHHHcCCCCCccEEE
Q 005221          137 GSPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKG---CNYGPPYEWQVYNTLGGSHGVPRVH  213 (708)
Q Consensus       137 ~~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~---~~~~~~~Ei~il~~L~h~~~v~~~~  213 (708)
                      ..++|++.+.||+|+||.||+|++..          +++.||||++......   ....+.+|+.+++.|+|+|++..+.
T Consensus        30 ~~~~y~~~~~lg~G~~g~Vy~~~~~~----------~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~   99 (310)
T 2wqm_A           30 TLANFRIEKKIGRGQFSEVYRAACLL----------DGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYA   99 (310)
T ss_dssp             SGGGEEEEEEEECC--CEEEEEEETT----------TCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred             cccceEEEEeecCCCCceEEEEEEcC----------CCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEE
Confidence            34579999999999999999999877          7899999998753221   2234678999999999988666555


Q ss_pred             EEeeeCCEEEEEEecC-CCCHHHHHhc---cCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCC
Q 005221          214 FKGRQGDYYVMVMDML-GPSLWDVWNN---NSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEK  289 (708)
Q Consensus       214 ~~~~~~~~~~lvme~~-ggsL~~~l~~---~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~  289 (708)
                      . +...+.+++|||++ +++|.+++..   ....+++..++.++.||+.||.|||++||+||||||+|||++.++     
T Consensus       100 ~-~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIl~~~~~-----  173 (310)
T 2wqm_A          100 S-FIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATG-----  173 (310)
T ss_dssp             E-EEETTEEEEEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTS-----
T ss_pred             E-EEcCCcEEEEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCcHHHEEEcCCC-----
Confidence            4 46678899999999 7799998864   345699999999999999999999999999999999999998777     


Q ss_pred             cEEEeccCccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCch
Q 005221          290 KLFLVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKG  369 (708)
Q Consensus       290 ~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLltG~~Pf~~~~~~~~~  369 (708)
                      .+||+|||++.........        .....||+.|+|||++.+..++.++|||||||++|+|++|+.||.+...... 
T Consensus       174 ~~kl~Dfg~~~~~~~~~~~--------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~-  244 (310)
T 2wqm_A          174 VVKLGDLGLGRFFSSKTTA--------AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLY-  244 (310)
T ss_dssp             CEEECCC--------------------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHH-
T ss_pred             CEEEEeccceeeecCCCcc--------ccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHH-
Confidence            5999999999876543221        1235699999999999999999999999999999999999999986432211 


Q ss_pred             hhhhhhccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhHH
Q 005221          370 FLVCKKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKLI  439 (708)
Q Consensus       370 ~~i~~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~~  439 (708)
                      ...........+......++                     ..+.+||.+||..||.+||++.+++++.-
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~---------------------~~l~~li~~~l~~dp~~Rps~~~il~~l~  293 (310)
T 2wqm_A          245 SLCKKIEQCDYPPLPSDHYS---------------------EELRQLVNMCINPDPEKRPDVTYVYDVAK  293 (310)
T ss_dssp             HHHHHHHTTCSCCCCTTTSC---------------------HHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             HHHHHhhcccCCCCcccccC---------------------HHHHHHHHHHcCCChhhCCCHHHHHHHHH
Confidence            11111111111111111122                     46788889999999999999998887753


No 220
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=4.5e-39  Score=345.48  Aligned_cols=260  Identities=15%  Similarity=0.131  Sum_probs=194.6

Q ss_pred             CCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCC-CCCCChHHHHHHHHcCCCCCccEEEEEe
Q 005221          138 SPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKG-CNYGPPYEWQVYNTLGGSHGVPRVHFKG  216 (708)
Q Consensus       138 ~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~-~~~~~~~Ei~il~~L~h~~~v~~~~~~~  216 (708)
                      ..+|.+.+.||+|+||.||+|++...      .+..+..||||++...... ....+.+|+.+++.|+|+|++..+..+ 
T Consensus        43 ~~~~~~~~~lG~G~~g~Vy~~~~~~~------~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-  115 (333)
T 1mqb_A           43 PSCVTRQKVIGAGEFGEVYKGMLKTS------SGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVI-  115 (333)
T ss_dssp             TTTEEEEEEEEECSSSEEEEEEEEC---------CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEE-
T ss_pred             hHHhhcccEEecCCCeEEEEEEEecC------CCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEE-
Confidence            45799999999999999999998751      1113567999998754321 223467899999999998866665554 


Q ss_pred             eeCCEEEEEEecC-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcEEEec
Q 005221          217 RQGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVD  295 (708)
Q Consensus       217 ~~~~~~~lvme~~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~vkL~D  295 (708)
                      ...+.++||||++ +++|.+++......+++..++.++.||+.||.|||++||+||||||+|||++.++     .+||+|
T Consensus       116 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~-----~~kl~D  190 (333)
T 1mqb_A          116 SKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNL-----VCKVSD  190 (333)
T ss_dssp             CSSSSEEEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTC-----CEEECC
T ss_pred             ecCCCcEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChheEEECCCC-----cEEECC
Confidence            6677899999999 7799999987766899999999999999999999999999999999999998777     599999


Q ss_pred             cCccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCCchhhhhh
Q 005221          296 LGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLR-GRLPWQGYQGENKGFLVCK  374 (708)
Q Consensus       296 FGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLlt-G~~Pf~~~~~~~~~~~i~~  374 (708)
                      ||+++..........     ......+|+.|+|||++.+..++.++|||||||+||+|++ |+.||.+....+....+..
T Consensus       191 fg~~~~~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~  265 (333)
T 1mqb_A          191 FGLSRVLEDDPEATY-----TTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAIND  265 (333)
T ss_dssp             CCC----------------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHT
T ss_pred             CCcchhhcccccccc-----ccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHC
Confidence            999987654322111     1112347889999999999999999999999999999999 9999987554333222222


Q ss_pred             hccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhHH
Q 005221          375 KKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKLI  439 (708)
Q Consensus       375 ~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~~  439 (708)
                      ......    +..+|                     ..+.+||.+||..||++||++.++++++-
T Consensus       266 ~~~~~~----~~~~~---------------------~~l~~li~~~l~~~p~~Rps~~~l~~~L~  305 (333)
T 1mqb_A          266 GFRLPT----PMDCP---------------------SAIYQLMMQCWQQERARRPKFADIVSILD  305 (333)
T ss_dssp             TCCCCC----CTTCB---------------------HHHHHHHHHHTCSSTTTSCCHHHHHHHHH
T ss_pred             CCcCCC----cccCC---------------------HHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence            211111    11122                     46788888888889999999888887754


No 221
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00  E-value=9.7e-40  Score=349.05  Aligned_cols=274  Identities=18%  Similarity=0.097  Sum_probs=209.2

Q ss_pred             CCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCCCCCCChHHHHHHHHcCCCCCccEEEEEe-
Q 005221          138 SPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNTLGGSHGVPRVHFKG-  216 (708)
Q Consensus       138 ~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~~~~~~~~Ei~il~~L~h~~~v~~~~~~~-  216 (708)
                      .++|++++.||+|+||.||+|++...      ...+++.||||++..........+.+|++++++|+|+|++..+..+. 
T Consensus        22 ~~~y~~~~~lg~G~~g~V~~~~~~~~------~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~   95 (327)
T 3lxl_A           22 ERHLKYISQLGKGNFGSVELCRYDPL------GDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYG   95 (327)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEECTT------SSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEC
T ss_pred             hhhhhhhhhccCCCCeEEEEEEeccC------CCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEec
Confidence            45799999999999999999995321      11278999999997664433445789999999999998777776654 


Q ss_pred             eeCCEEEEEEecC-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcEEEec
Q 005221          217 RQGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVD  295 (708)
Q Consensus       217 ~~~~~~~lvme~~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~vkL~D  295 (708)
                      .....+++||||+ +++|.+++......+++..++.++.||+.||.|||++||+||||||+||||+.++     .+||+|
T Consensus        96 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~-----~~kl~D  170 (327)
T 3lxl_A           96 PGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEA-----HVKIAD  170 (327)
T ss_dssp             SSSCEEEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETT-----EEEECC
T ss_pred             CCCceEEEEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChhhEEECCCC-----CEEEcc
Confidence            4667899999999 9999999987655799999999999999999999999999999999999998877     599999


Q ss_pred             cCccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhh
Q 005221          296 LGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCKK  375 (708)
Q Consensus       296 FGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLltG~~Pf~~~~~~~~~~~i~~~  375 (708)
                      ||+++.........     .......||+.|+|||++.+..++.++|||||||++|+|++|..||.........    ..
T Consensus       171 fg~~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~----~~  241 (327)
T 3lxl_A          171 FGLAKLLPLDKDYY-----VVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLR----MM  241 (327)
T ss_dssp             GGGCEECCTTCSEE-----ECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHH----HC
T ss_pred             cccceecccCCccc-----eeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhh----hc
Confidence            99998765443211     1122355899999999999999999999999999999999999999763221100    00


Q ss_pred             ccCCCCCCccCCCChHHHHHHHHHHcCCCCCcc--cHHHHHHHHHhhhCCCCCCCCcchHHHHhHH
Q 005221          376 KMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEP--NYAKYISLFDGIVGPNPDIRPISTEGAQKLI  439 (708)
Q Consensus       376 ~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP--~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~~  439 (708)
                      ..        ......+..+...+........|  -...+.+||.+||..||++|||+.|+++++-
T Consensus       242 ~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~  299 (327)
T 3lxl_A          242 GC--------ERDVPALSRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLD  299 (327)
T ss_dssp             C------------CCHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             cc--------ccccccHHHHHHHhhcccCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence            00        00111223333333332222222  1257899999999999999999999988753


No 222
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00  E-value=3.1e-39  Score=339.16  Aligned_cols=254  Identities=18%  Similarity=0.184  Sum_probs=195.6

Q ss_pred             CCCeEEEE-eEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCC--CCCCChHHHHHHHHcCCCCCccEEEE
Q 005221          138 SPMYRLER-KLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKG--CNYGPPYEWQVYNTLGGSHGVPRVHF  214 (708)
Q Consensus       138 ~~~Y~i~~-~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~--~~~~~~~Ei~il~~L~h~~~v~~~~~  214 (708)
                      ..+|++.+ .||+|+||.||+|.+..        ..+++.||||++......  ....+.+|+.+++.|+|+|++..+..
T Consensus        15 ~~~y~~~~~~lg~G~~g~Vy~~~~~~--------~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~   86 (291)
T 1xbb_A           15 RKLLTLEDKELGSGNFGTVKKGYYQM--------KKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGI   86 (291)
T ss_dssp             GGGEEEEEEEEEECSSEEEEEEEEEC--------SSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred             chhhhhccCccccccCeeeEeeeecC--------CCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEE
Confidence            45799999 99999999999997643        115789999999765322  12357789999999999997777766


Q ss_pred             EeeeCCEEEEEEecC-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcEEE
Q 005221          215 KGRQGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFL  293 (708)
Q Consensus       215 ~~~~~~~~~lvme~~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~vkL  293 (708)
                      +  ..+.+++|||++ +++|.+++.... .+++..++.++.||+.||.|||++||+||||||+|||++.++     .+||
T Consensus        87 ~--~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nil~~~~~-----~~kl  158 (291)
T 1xbb_A           87 C--EAESWMLVMEMAELGPLNKYLQQNR-HVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQH-----YAKI  158 (291)
T ss_dssp             E--ESSSEEEEEECCTTEEHHHHHHHCT-TCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETT-----EEEE
T ss_pred             E--CCCCcEEEEEeCCCCCHHHHHHhCc-CCCHHHHHHHHHHHHHHHHHHHhCCeEcCCCCcceEEEeCCC-----cEEE
Confidence            5  556688999999 799999998754 699999999999999999999999999999999999998777     6999


Q ss_pred             eccCccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCCchhhh
Q 005221          294 VDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLR-GRLPWQGYQGENKGFLV  372 (708)
Q Consensus       294 ~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLlt-G~~Pf~~~~~~~~~~~i  372 (708)
                      +|||++...........     ......+|+.|+|||++.+..++.++|||||||++|+|++ |+.||.+....+....+
T Consensus       159 ~Dfg~~~~~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~  233 (291)
T 1xbb_A          159 SDFGLSKALRADENYYK-----AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAML  233 (291)
T ss_dssp             CCCTTCEECCTTCSEEE-----C----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHH
T ss_pred             ccCCcceeeccCCCccc-----ccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHH
Confidence            99999987655432111     1122347899999999999999999999999999999999 99999886544333333


Q ss_pred             hhhccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHh
Q 005221          373 CKKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQK  437 (708)
Q Consensus       373 ~~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h  437 (708)
                      ......    .++..+|                     ..+.++|.+||..||.+||++.++++.
T Consensus       234 ~~~~~~----~~~~~~~---------------------~~l~~li~~~l~~dp~~Rps~~~l~~~  273 (291)
T 1xbb_A          234 EKGERM----GCPAGCP---------------------REMYDLMNLCWTYDVENRPGFAAVELR  273 (291)
T ss_dssp             HTTCCC----CCCTTCC---------------------HHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred             HcCCCC----CCCCCCC---------------------HHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            222211    1122233                     356778888888888888888887654


No 223
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00  E-value=1.3e-39  Score=362.77  Aligned_cols=265  Identities=15%  Similarity=0.201  Sum_probs=191.0

Q ss_pred             CCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCCCCCCChHHHHHHHHc-CCCCCccEEEEEe
Q 005221          138 SPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNTL-GGSHGVPRVHFKG  216 (708)
Q Consensus       138 ~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~~~~~~~~Ei~il~~L-~h~~~v~~~~~~~  216 (708)
                      .+.|.+.+.||+|+||+||.+.. .          +++.||||.+....   ...+.+|+.+|..+ +|+|+|. ++...
T Consensus        14 ~~~~~~~~~LG~G~~g~V~~~~~-~----------~g~~vAvK~~~~~~---~~~~~~E~~~l~~l~~HpnIv~-~~~~~   78 (434)
T 2rio_A           14 KNLVVSEKILGYGSSGTVVFQGS-F----------QGRPVAVKRMLIDF---CDIALMEIKLLTESDDHPNVIR-YYCSE   78 (434)
T ss_dssp             SSCEEEEEEEEECSTTCEEEEEE-S----------SSSEEEEEEEEGGG---HHHHHHHHHHHHHHTTSTTBCC-EEEEE
T ss_pred             hheeeccCeEeeCCCeEEEEEEE-E----------CCeEEEEEEEcHHH---HHHHHHHHHHHHhccCCCCcCe-EEEEE
Confidence            45688889999999999987533 3          58899999987642   22457899999987 6777555 55666


Q ss_pred             eeCCEEEEEEecCCCCHHHHHhccCCC------CCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCC------
Q 005221          217 RQGDYYVMVMDMLGPSLWDVWNNNSHT------MSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPG------  284 (708)
Q Consensus       217 ~~~~~~~lvme~~ggsL~~~l~~~~~~------l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g------  284 (708)
                      ..++.++||||+++++|.+++......      .++..++.|+.||+.||.|||++|||||||||+||||+.++      
T Consensus        79 ~~~~~~~lv~E~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~~~~~  158 (434)
T 2rio_A           79 TTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQ  158 (434)
T ss_dssp             ECSSEEEEEECCCSEEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEECCHHHHSCC
T ss_pred             ecCCeEEEEEecCCCCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCccccccc
Confidence            788899999999988999999865421      13334678999999999999999999999999999997643      


Q ss_pred             --CCCCCcEEEeccCccccccCCCCCccccccCCCceeeccccccchhhhcC-------CCCCchhhHHHHHHHHHHHHh
Q 005221          285 --TPDEKKLFLVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLG-------RTGSRRDDLESLAYTLIFLLR  355 (708)
Q Consensus       285 --~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~-------~~~s~~~DIwSlGviL~eLlt  355 (708)
                        ......+||+|||+++..........    ......+||+.|+|||++.+       ..++.++|||||||+||+|++
T Consensus       159 ~~~~~~~~~kL~DFG~a~~~~~~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt  234 (434)
T 2rio_A          159 QTGAENLRILISDFGLCKKLDSGQSSFR----TNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILS  234 (434)
T ss_dssp             TTCCCSCEEEECCCTTCEECCC------------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHT
T ss_pred             ccCCCceEEEEcccccceecCCCCccce----eeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHh
Confidence              12345799999999998765432111    11234579999999999976       678999999999999999999


Q ss_pred             -CCCCCCCCCCCCchhhhhhhccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHH
Q 005221          356 -GRLPWQGYQGENKGFLVCKKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEG  434 (708)
Q Consensus       356 -G~~Pf~~~~~~~~~~~i~~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~  434 (708)
                       |+.||.+.....  ..+.........  +....+.                 .-...+.+||.+||..||.+|||+.++
T Consensus       235 ~g~~Pf~~~~~~~--~~i~~~~~~~~~--~~~~~~~-----------------~~~~~~~~li~~~L~~dP~~Rps~~ei  293 (434)
T 2rio_A          235 KGKHPFGDKYSRE--SNIIRGIFSLDE--MKCLHDR-----------------SLIAEATDLISQMIDHDPLKRPTAMKV  293 (434)
T ss_dssp             TSCCTTCSTTTHH--HHHHHTCCCCCC--CTTCCCH-----------------HHHHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             CCCCCCCCchhhH--HHHhcCCCCccc--ccccccc-----------------cchHHHHHHHHHHhhCChhhCCCHHHH
Confidence             999997643222  222222221111  0000011                 112578999999999999999999999


Q ss_pred             HHhHHHHh
Q 005221          435 AQKLIYQV  442 (708)
Q Consensus       435 l~h~~f~~  442 (708)
                      ++||||..
T Consensus       294 l~hp~f~~  301 (434)
T 2rio_A          294 LRHPLFWP  301 (434)
T ss_dssp             HTSGGGSC
T ss_pred             HhCCccCC
Confidence            99999953


No 224
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00  E-value=2.8e-39  Score=343.31  Aligned_cols=268  Identities=20%  Similarity=0.239  Sum_probs=199.0

Q ss_pred             cccCCCCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCCCCCCChHHHHHHHHcCCCCCccEE
Q 005221          133 IAVGGSPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNTLGGSHGVPRV  212 (708)
Q Consensus       133 ~~~~~~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~~~~~~~~Ei~il~~L~h~~~v~~~  212 (708)
                      ......++|++++.||+|+||.||+|++..          +++.||||++..........+.+|+.+++.|+|+|++..+
T Consensus        23 ~~~i~~~~y~~~~~lg~G~~g~V~~~~~~~----------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~   92 (317)
T 2buj_A           23 MVIIDNKHYLFIQKLGEGGFSYVDLVEGLH----------DGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLV   92 (317)
T ss_dssp             EEEETTEEEEEEEEEEC--CEEEEEEEETT----------TCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCC
T ss_pred             EEEECCeEEEEEEEecCCCCeEEEEEEecC----------CCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEE
Confidence            334455789999999999999999999977          7899999998765443344678899999999999988877


Q ss_pred             EEEee---eCCEEEEEEecC-CCCHHHHHhc---cCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCC
Q 005221          213 HFKGR---QGDYYVMVMDML-GPSLWDVWNN---NSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGT  285 (708)
Q Consensus       213 ~~~~~---~~~~~~lvme~~-ggsL~~~l~~---~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~  285 (708)
                      ..+..   ....+++||||+ +++|.+++..   .+..+++..++.++.||+.||.|||++||+||||||+|||++.++ 
T Consensus        93 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dlkp~NIl~~~~~-  171 (317)
T 2buj_A           93 AYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEG-  171 (317)
T ss_dssp             EEEEEEETTEEEEEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTS-
T ss_pred             EEEEeccCCCceeEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCC-
Confidence            76653   235889999999 7899999876   345799999999999999999999999999999999999998777 


Q ss_pred             CCCCcEEEeccCccccccCCCCCcccc-ccCCCceeeccccccchhhhcCCC---CCchhhHHHHHHHHHHHHhCCCCCC
Q 005221          286 PDEKKLFLVDLGLATKWRDSTTGMHVE-YDQRPDVFRGTVRYASVHAHLGRT---GSRRDDLESLAYTLIFLLRGRLPWQ  361 (708)
Q Consensus       286 ~~~~~vkL~DFGla~~~~~~~~~~~~~-~~~~~~~~~GT~~Y~APE~~~~~~---~s~~~DIwSlGviL~eLltG~~Pf~  361 (708)
                          .+||+|||++............. .........||+.|+|||++.+..   ++.++|||||||++|+|++|+.||.
T Consensus       172 ----~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~  247 (317)
T 2buj_A          172 ----QPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYD  247 (317)
T ss_dssp             ----CEEECCCSSCEESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTH
T ss_pred             ----CEEEEecCcchhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChh
Confidence                59999999987643221110000 000011245799999999988664   6899999999999999999999996


Q ss_pred             CCCCCC-chhhhhhhccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhHH
Q 005221          362 GYQGEN-KGFLVCKKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKLI  439 (708)
Q Consensus       362 ~~~~~~-~~~~i~~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~~  439 (708)
                      ...... ........... .+.  ...++                     ..+.+||.+||..||.+||++.++++++.
T Consensus       248 ~~~~~~~~~~~~~~~~~~-~~~--~~~~~---------------------~~l~~li~~~l~~dp~~Rps~~~ll~~L~  302 (317)
T 2buj_A          248 MVFQKGDSVALAVQNQLS-IPQ--SPRHS---------------------SALWQLLNSMMTVDPHQRPHIPLLLSQLE  302 (317)
T ss_dssp             HHHHTTSCHHHHHHCC---CCC--CTTSC---------------------HHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             hhhcccchhhHHhhccCC-CCc--cccCC---------------------HHHHHHHHHHhhcChhhCCCHHHHHHHhh
Confidence            532111 11111111110 000  01122                     46788888888888888888888888864


No 225
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00  E-value=1.2e-39  Score=341.39  Aligned_cols=260  Identities=20%  Similarity=0.186  Sum_probs=189.1

Q ss_pred             CCCCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCC---CCCCCChHHHHHHHHcCCCCCccEE
Q 005221          136 GGSPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSK---GCNYGPPYEWQVYNTLGGSHGVPRV  212 (708)
Q Consensus       136 ~~~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~---~~~~~~~~Ei~il~~L~h~~~v~~~  212 (708)
                      ...++|++++.||+|+||.||+|++...       ...+..||||+++....   .....+.+|+.+++.|+|+|++..+
T Consensus        15 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~-------~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~   87 (291)
T 1u46_A           15 IGEKDLRLLEKLGDGSFGVVRRGEWDAP-------SGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLY   87 (291)
T ss_dssp             CCGGGEEEEEECC----CCCEEEEEECT-------TSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred             cchhHeeeeeeecCCCceeEEEEEeccC-------CCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEE
Confidence            3456899999999999999999997541       11344799999876422   1223567899999999999877766


Q ss_pred             EEEeeeCCEEEEEEecC-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcE
Q 005221          213 HFKGRQGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKL  291 (708)
Q Consensus       213 ~~~~~~~~~~~lvme~~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~v  291 (708)
                      ..+.. +. .++|||++ +++|.+++......+++..+..++.||+.||.|||++||+||||||+|||++.++     .+
T Consensus        88 ~~~~~-~~-~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nili~~~~-----~~  160 (291)
T 1u46_A           88 GVVLT-PP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRD-----LV  160 (291)
T ss_dssp             EEECS-SS-CEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETT-----EE
T ss_pred             EEEcc-CC-ceeeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEEcCCC-----CE
Confidence            66543 33 78999999 8999999987655799999999999999999999999999999999999998777     69


Q ss_pred             EEeccCccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCCchh
Q 005221          292 FLVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLR-GRLPWQGYQGENKGF  370 (708)
Q Consensus       292 kL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLlt-G~~Pf~~~~~~~~~~  370 (708)
                      ||+|||++...........     ......+|+.|+|||++.+..++.++|||||||++|+|++ |+.||.+.+......
T Consensus       161 kl~Dfg~~~~~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~  235 (291)
T 1u46_A          161 KIGDFGLMRALPQNDDHYV-----MQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILH  235 (291)
T ss_dssp             EECCCTTCEECCC-CCEEE-----C-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHH
T ss_pred             EEccccccccccccccchh-----hhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHHHHH
Confidence            9999999987654432111     1223458889999999999999999999999999999999 999998765443332


Q ss_pred             hhhhhccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhH
Q 005221          371 LVCKKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKL  438 (708)
Q Consensus       371 ~i~~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~  438 (708)
                      .+......   ...+..+|                     ..+.++|.+||..||++||++.++++++
T Consensus       236 ~~~~~~~~---~~~~~~~~---------------------~~l~~li~~~l~~~p~~Rps~~~l~~~l  279 (291)
T 1u46_A          236 KIDKEGER---LPRPEDCP---------------------QDIYNVMVQCWAHKPEDRPTFVALRDFL  279 (291)
T ss_dssp             HHHTSCCC---CCCCTTCC---------------------HHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             HHHccCCC---CCCCcCcC---------------------HHHHHHHHHHccCCcccCcCHHHHHHHH
Confidence            22222111   11112233                     3567777778888888888887777764


No 226
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00  E-value=6.6e-39  Score=340.04  Aligned_cols=247  Identities=21%  Similarity=0.216  Sum_probs=187.7

Q ss_pred             CCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCCCCCCChHHHHHHHHcCCCCCccEEEEEee
Q 005221          138 SPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNTLGGSHGVPRVHFKGR  217 (708)
Q Consensus       138 ~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~~~~~~~~Ei~il~~L~h~~~v~~~~~~~~  217 (708)
                      .++|++.+.||+|+||.||+|++            .++.||||++....  ....+.+|+.+|++|+|+|++..+..+. 
T Consensus         7 ~~~~~~~~~lg~G~~g~V~~~~~------------~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~hp~iv~~~~~~~-   71 (307)
T 2eva_A            7 YKEIEVEEVVGRGAFGVVCKAKW------------RAKDVAIKQIESES--ERKAFIVELRQLSRVNHPNIVKLYGACL-   71 (307)
T ss_dssp             GGGEEEEEEEECCSSSEEEEEEE------------TTEEEEEEECSSTT--HHHHHHHHHHHHHHCCCTTBCCEEEBCT-
T ss_pred             HhHeeeeeEeecCCCceEEEEEE------------CCeeEEEEEecChh--HHHHHHHHHHHHhcCCCCCcCeEEEEEc-
Confidence            45799999999999999999987            45789999986432  2345778999999999999777665543 


Q ss_pred             eCCEEEEEEecC-CCCHHHHHhccCC--CCCHHHHHHHHHHHHHHHHHHHh---CCceecCCCCCcEEeCCCCCCCCCcE
Q 005221          218 QGDYYVMVMDML-GPSLWDVWNNNSH--TMSIEMVACIAIEAISILEKMHS---KGYVHGDVKPENFLLGPPGTPDEKKL  291 (708)
Q Consensus       218 ~~~~~~lvme~~-ggsL~~~l~~~~~--~l~~~~~~~i~~qil~aL~yLH~---~gIvHrDIKP~NILl~~~g~~~~~~v  291 (708)
                        +..++||||+ +++|.+++.....  .+++..++.++.||+.||.|||+   +||+||||||+|||++.++.    .+
T Consensus        72 --~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~----~~  145 (307)
T 2eva_A           72 --NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGT----VL  145 (307)
T ss_dssp             --TTTEEEEECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTT----EE
T ss_pred             --CCcEEEEEcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCC----EE
Confidence              3478999999 8899999986542  47899999999999999999999   89999999999999987663    48


Q ss_pred             EEeccCccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCchhh
Q 005221          292 FLVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFL  371 (708)
Q Consensus       292 kL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLltG~~Pf~~~~~~~~~~~  371 (708)
                      ||+|||++.......           ....||+.|+|||++.+..++.++|||||||++|+|++|+.||.......... 
T Consensus       146 kl~Dfg~~~~~~~~~-----------~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~-  213 (307)
T 2eva_A          146 KICDFGTACDIQTHM-----------TNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRI-  213 (307)
T ss_dssp             EECCCCC-----------------------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHH-
T ss_pred             EEccccccccccccc-----------ccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHH-
Confidence            999999997654321           12459999999999999999999999999999999999999998654332111 


Q ss_pred             hhhhccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhHH
Q 005221          372 VCKKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKLI  439 (708)
Q Consensus       372 i~~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~~  439 (708)
                       ...........+...+|                     ..+.+|+.+||..||++|||+.++++++-
T Consensus       214 -~~~~~~~~~~~~~~~~~---------------------~~l~~li~~~l~~dp~~Rps~~ell~~L~  259 (307)
T 2eva_A          214 -MWAVHNGTRPPLIKNLP---------------------KPIESLMTRCWSKDPSQRPSMEEIVKIMT  259 (307)
T ss_dssp             -HHHHHTTCCCCCBTTCC---------------------HHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             -HHHHhcCCCCCcccccC---------------------HHHHHHHHHHhcCChhhCcCHHHHHHHHH
Confidence             11111111111222233                     35678888888888888888888887753


No 227
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00  E-value=4.2e-39  Score=335.64  Aligned_cols=249  Identities=18%  Similarity=0.190  Sum_probs=193.4

Q ss_pred             CCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCCCCCCChHHHHHHHHcCCCCCccEEEEEee
Q 005221          138 SPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNTLGGSHGVPRVHFKGR  217 (708)
Q Consensus       138 ~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~~~~~~~~Ei~il~~L~h~~~v~~~~~~~~  217 (708)
                      .++|++++.||+|+||.||+|++..           +..||+|++..... ....+.+|+++|+.|+|+|++..+..+. 
T Consensus        12 ~~~y~~~~~lg~G~~g~Vy~~~~~~-----------~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~-   78 (279)
T 1qpc_A           12 RETLKLVERLGAGQFGEVWMGYYNG-----------HTKVAVKSLKQGSM-SPDAFLAEANLMKQLQHQRLVRLYAVVT-   78 (279)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETT-----------TEEEEEEEECTTSS-CHHHHHHHHHHHHHCCCTTBCCEEEEEC-
T ss_pred             HHhhhheeeecCCCCeEEEEEEEcC-----------CcEEEEEEecCCcc-cHHHHHHHHHHHHhCCCcCcceEEEEEc-
Confidence            3579999999999999999998743           57899999876532 2345778999999999999777766543 


Q ss_pred             eCCEEEEEEecC-CCCHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcEEEec
Q 005221          218 QGDYYVMVMDML-GPSLWDVWNNNS-HTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVD  295 (708)
Q Consensus       218 ~~~~~~lvme~~-ggsL~~~l~~~~-~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~vkL~D  295 (708)
                       .+..++|||++ +++|.+++.... ..+++..+..++.||+.||.|||++||+||||||+|||++.++     .+||+|
T Consensus        79 -~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~-----~~kl~D  152 (279)
T 1qpc_A           79 -QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTL-----SCKIAD  152 (279)
T ss_dssp             -SSSCEEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTS-----CEEECC
T ss_pred             -CCCcEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHhhEEEcCCC-----CEEECC
Confidence             44588999999 899999987542 2699999999999999999999999999999999999998776     599999


Q ss_pred             cCccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCCchhhhhh
Q 005221          296 LGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLR-GRLPWQGYQGENKGFLVCK  374 (708)
Q Consensus       296 FGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLlt-G~~Pf~~~~~~~~~~~i~~  374 (708)
                      ||++..........       .....+|+.|+|||++.+..++.++|||||||++|+|++ |++||.+....+....+..
T Consensus       153 fg~~~~~~~~~~~~-------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~  225 (279)
T 1qpc_A          153 FGLARLIEDNEYTA-------REGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER  225 (279)
T ss_dssp             CTTCEECSSSCEEC-------CTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHT
T ss_pred             CcccccccCccccc-------ccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHHHHHHHhc
Confidence            99998765432111       122447889999999998999999999999999999999 9999987554333222222


Q ss_pred             hccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHh
Q 005221          375 KKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQK  437 (708)
Q Consensus       375 ~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h  437 (708)
                      ...    ...+..+|                     ..+.+|+.+||..||++|||+.++++.
T Consensus       226 ~~~----~~~~~~~~---------------------~~l~~li~~~l~~~p~~Rps~~~l~~~  263 (279)
T 1qpc_A          226 GYR----MVRPDNCP---------------------EELYQLMRLCWKERPEDRPTFDYLRSV  263 (279)
T ss_dssp             TCC----CCCCTTCC---------------------HHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ccC----CCCccccc---------------------HHHHHHHHHHhccChhhCCCHHHHHHH
Confidence            111    11122333                     356677777777777777777776654


No 228
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00  E-value=1.9e-39  Score=345.72  Aligned_cols=269  Identities=18%  Similarity=0.103  Sum_probs=198.4

Q ss_pred             CeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCC-CCCCCChHHHHHHHHcCCCCCccEEEEEeee
Q 005221          140 MYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSK-GCNYGPPYEWQVYNTLGGSHGVPRVHFKGRQ  218 (708)
Q Consensus       140 ~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~-~~~~~~~~Ei~il~~L~h~~~v~~~~~~~~~  218 (708)
                      .|+++++||+|+||.||++....      ....+++.||||++..... .....+.+|+.+|+.|+|+|++..+..+...
T Consensus        32 ~~~~~~~lG~G~~g~V~~~~~~~------~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~  105 (318)
T 3lxp_A           32 YLKKIRDLGEGHFGKVSLYCYDP------TNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDA  105 (318)
T ss_dssp             GEEEEEEEEECSSEEEEEEEECS------CC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEET
T ss_pred             HHhhhheecCCCCeEEEEEEEcc------CCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecC
Confidence            35999999999999999987643      1122688999999986532 1233467899999999999987777766544


Q ss_pred             -CCEEEEEEecC-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcEEEecc
Q 005221          219 -GDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDL  296 (708)
Q Consensus       219 -~~~~~lvme~~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~vkL~DF  296 (708)
                       ...+++|||++ +++|.+++....  +++..++.++.||+.||.|||++||+||||||+|||++.++     .+||+||
T Consensus       106 ~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~i~~~l~~~l~~LH~~~ivH~Dikp~Nil~~~~~-----~~kl~Df  178 (318)
T 3lxp_A          106 GAASLQLVMEYVPLGSLRDYLPRHS--IGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDR-----LVKIGDF  178 (318)
T ss_dssp             TTTEEEEEECCCTTCBHHHHGGGSC--CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTC-----CEEECCG
T ss_pred             CCceEEEEEecccCCcHHHHHhhCC--CCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEEcCCC-----CEEECCc
Confidence             57899999999 889999997754  99999999999999999999999999999999999998877     5999999


Q ss_pred             CccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhhc
Q 005221          297 GLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCKKK  376 (708)
Q Consensus       297 Gla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLltG~~Pf~~~~~~~~~~~i~~~~  376 (708)
                      |+++.........     .......||+.|+|||++.+..++.++|||||||++|+|++|..||........    ....
T Consensus       179 g~a~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~----~~~~  249 (318)
T 3lxp_A          179 GLAKAVPEGHEYY-----RVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFL----ELIG  249 (318)
T ss_dssp             GGCEECCTTCSEE-----EC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHH----HHHC
T ss_pred             ccccccccccccc-----ccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhh----hhhc
Confidence            9998876543211     112235589999999999999999999999999999999999999975321100    0000


Q ss_pred             cCCCCCCccCCCChHHHHHHHHHHcCCCCCccc--HHHHHHHHHhhhCCCCCCCCcchHHHHhH
Q 005221          377 MATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPN--YAKYISLFDGIVGPNPDIRPISTEGAQKL  438 (708)
Q Consensus       377 ~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~--~~~l~~LL~~mL~~dP~~Rps~~e~l~h~  438 (708)
                      .  ..      -......+...+........|.  ...+.+||.+||..||++|||+.|+++.+
T Consensus       250 ~--~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L  305 (318)
T 3lxp_A          250 I--AQ------GQMTVLRLTELLERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPIL  305 (318)
T ss_dssp             S--CC------HHHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             c--cc------cchhHHHHHHHHhcccCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHH
Confidence            0  00      0001111222222221111111  25788889999999999999998888654


No 229
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00  E-value=2.6e-39  Score=366.27  Aligned_cols=256  Identities=16%  Similarity=0.188  Sum_probs=194.3

Q ss_pred             CCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCCCCCCChHHHHHHHHcCCCCCccEEEEEee
Q 005221          138 SPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNTLGGSHGVPRVHFKGR  217 (708)
Q Consensus       138 ~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~~~~~~~~Ei~il~~L~h~~~v~~~~~~~~  217 (708)
                      ..+|++.++||+|+||.||+|++..          ++..||||+++.... ....+.+|+.+|++|+|+|+|..+..+ .
T Consensus       219 ~~~~~~~~~lG~G~fg~Vy~~~~~~----------~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~l~~~~-~  286 (495)
T 1opk_A          219 RTDITMKHKLGGGQYGEVYEGVWKK----------YSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVC-T  286 (495)
T ss_dssp             GGGEEEEEESGGGTTSSEEEEEEGG----------GTEEEEEEECCSSSS-CHHHHHHHHHHHHHCCCTTBCCEEEEE-C
T ss_pred             HHHceeeeEecCCCCeEEEEEEEcC----------CCeEEEEEEecCccc-chHHHHHHHHHHHhcCCCCEeeEEEEE-e
Confidence            3569999999999999999999977          688999999976533 234578899999999999877766655 5


Q ss_pred             eCCEEEEEEecC-CCCHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcEEEec
Q 005221          218 QGDYYVMVMDML-GPSLWDVWNNN-SHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVD  295 (708)
Q Consensus       218 ~~~~~~lvme~~-ggsL~~~l~~~-~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~vkL~D  295 (708)
                      ....++|||||+ +|+|.+++... ...+++..++.|+.||+.||+|||++|||||||||+||||+.++     .+||+|
T Consensus       287 ~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~-----~~kl~D  361 (495)
T 1opk_A          287 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENH-----LVKVAD  361 (495)
T ss_dssp             SSSSCEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGG-----CEEECC
T ss_pred             cCCcEEEEEEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEECCCC-----cEEEee
Confidence            566789999999 89999999864 34699999999999999999999999999999999999998776     599999


Q ss_pred             cCccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCCchhhhhh
Q 005221          296 LGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLR-GRLPWQGYQGENKGFLVCK  374 (708)
Q Consensus       296 FGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLlt-G~~Pf~~~~~~~~~~~i~~  374 (708)
                      ||+++........       ......+|+.|+|||++.+..++.++|||||||+||||++ |..||.+.+.......+..
T Consensus       362 FG~a~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~~~~~~~  434 (495)
T 1opk_A          362 FGLSRLMTGDTYT-------AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK  434 (495)
T ss_dssp             TTCEECCTTCCEE-------CCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHT
T ss_pred             cccceeccCCcee-------ecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc
Confidence            9999876543211       1122447889999999999999999999999999999999 9999998765544333332


Q ss_pred             hccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhh
Q 005221          375 KKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIV  421 (708)
Q Consensus       375 ~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL  421 (708)
                      ....    ..+..+|..+.+++..|+..++.+||++.++++.|+.++
T Consensus       435 ~~~~----~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~  477 (495)
T 1opk_A          435 DYRM----ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF  477 (495)
T ss_dssp             TCCC----CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred             CCCC----CCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHH
Confidence            2111    122345554444444444444444444444444444333


No 230
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00  E-value=6e-39  Score=359.23  Aligned_cols=254  Identities=20%  Similarity=0.234  Sum_probs=186.1

Q ss_pred             CCCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCCCCCCChHHHHHHHHcCCCCCccEEEEEe
Q 005221          137 GSPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNTLGGSHGVPRVHFKG  216 (708)
Q Consensus       137 ~~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~~~~~~~~Ei~il~~L~h~~~v~~~~~~~  216 (708)
                      ..++|++.++||+|+||.||+|++..           +..||||+++.... ....+.+|+.+|++|+|+|++..+..+.
T Consensus       182 ~~~~~~~~~~lG~G~fg~Vy~~~~~~-----------~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hp~iv~~~~~~~  249 (452)
T 1fmk_A          182 PRESLRLEVKLGQGCFGEVWMGTWNG-----------TTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVS  249 (452)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEETT-----------TEEEEEEECCTTSS-CHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred             ChhHceeeeeecCCCCeEEEEEEECC-----------CceEEEEEeccCCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEc
Confidence            34579999999999999999999854           46799999976532 2345789999999999999888776653


Q ss_pred             eeCCEEEEEEecC-CCCHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcEEEe
Q 005221          217 RQGDYYVMVMDML-GPSLWDVWNNN-SHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLV  294 (708)
Q Consensus       217 ~~~~~~~lvme~~-ggsL~~~l~~~-~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~vkL~  294 (708)
                      .  +.++|||||+ +|+|.+++... +..+++..+..++.||+.||+|||++|||||||||+|||++.++     .+||+
T Consensus       250 ~--~~~~iv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~-----~~kl~  322 (452)
T 1fmk_A          250 E--EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENL-----VCKVA  322 (452)
T ss_dssp             S--SSCEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGG-----CEEEC
T ss_pred             C--CceEEEehhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEECCCC-----CEEEC
Confidence            3  5688999999 88999999753 34699999999999999999999999999999999999998776     59999


Q ss_pred             ccCccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCCchhhhh
Q 005221          295 DLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLR-GRLPWQGYQGENKGFLVC  373 (708)
Q Consensus       295 DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLlt-G~~Pf~~~~~~~~~~~i~  373 (708)
                      |||+++........       ......+|+.|+|||++.+..++.++|||||||+||||++ |++||.+....+....+.
T Consensus       323 DfG~a~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~  395 (452)
T 1fmk_A          323 DFGLARLIEDNEYT-------ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE  395 (452)
T ss_dssp             CCCTTC---------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHH
T ss_pred             CCccceecCCCcee-------cccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Confidence            99999876543211       1123447889999999999999999999999999999999 999998866544433333


Q ss_pred             hhccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhh
Q 005221          374 KKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGI  420 (708)
Q Consensus       374 ~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~m  420 (708)
                      .....+    .+..+|..+.+++..|+..+|.+||++.++.+.|+.+
T Consensus       396 ~~~~~~----~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~  438 (452)
T 1fmk_A          396 RGYRMP----CPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY  438 (452)
T ss_dssp             TTCCCC----CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTT
T ss_pred             cCCCCC----CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence            322111    1234555444444444444444444444444444433


No 231
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00  E-value=3.3e-40  Score=365.20  Aligned_cols=248  Identities=12%  Similarity=0.066  Sum_probs=192.7

Q ss_pred             CeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCC---CCCCChHHHHHHHHcCCCCC--------
Q 005221          140 MYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKG---CNYGPPYEWQVYNTLGGSHG--------  208 (708)
Q Consensus       140 ~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~---~~~~~~~Ei~il~~L~h~~~--------  208 (708)
                      .|.+.+.||+|+||.||+|++..          +++.||||++......   ....+.+|+.+++.|.|..+        
T Consensus        79 ~~~~~~~LG~G~fG~Vy~a~~~~----------~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~  148 (413)
T 3dzo_A           79 TLVRGTVLGQEDPYAYLEATDQE----------TGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHL  148 (413)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETT----------TCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHT
T ss_pred             eEEEecccccCCCEEEEEEEecC----------CCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhc
Confidence            48999999999999999999987          7899999998844322   23456789999999987321        


Q ss_pred             --ccEEEE-----------Eee-----eCCEEEEEEecCCCCHHHHHh------ccCCCCCHHHHHHHHHHHHHHHHHHH
Q 005221          209 --VPRVHF-----------KGR-----QGDYYVMVMDMLGPSLWDVWN------NNSHTMSIEMVACIAIEAISILEKMH  264 (708)
Q Consensus       209 --v~~~~~-----------~~~-----~~~~~~lvme~~ggsL~~~l~------~~~~~l~~~~~~~i~~qil~aL~yLH  264 (708)
                        +..+..           ...     ....++++|++++++|.+++.      ..+..+++..+..|+.||+.||+|||
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH  228 (413)
T 3dzo_A          149 RFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLH  228 (413)
T ss_dssp             CBCCCCEEEECCC---------------CCSEEEEEECCSEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccccchhhcccCCCCccccccCCCccccccceEEEeehhcCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHH
Confidence              111111           011     123578999999999999984      22345888899999999999999999


Q ss_pred             hCCceecCCCCCcEEeCCCCCCCCCcEEEeccCccccccCCCCCccccccCCCceeeccccccchhhh----------cC
Q 005221          265 SKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAH----------LG  334 (708)
Q Consensus       265 ~~gIvHrDIKP~NILl~~~g~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~----------~~  334 (708)
                      ++|||||||||+||||+.++     .+||+|||+++.....           ....+| +.|+|||++          .+
T Consensus       229 ~~~iiHrDiKp~NILl~~~~-----~~kL~DFG~a~~~~~~-----------~~~~~g-~~y~aPE~~~~~~~~~~~~~~  291 (413)
T 3dzo_A          229 HYGLVHTYLRPVDIVLDQRG-----GVFLTGFEHLVRDGAS-----------AVSPIG-RGFAPPETTAERMLPFGQHHP  291 (413)
T ss_dssp             HTTEECSCCCGGGEEECTTC-----CEEECCGGGCEETTEE-----------ECCCCC-TTTCCHHHHHHHTSTTGGGCC
T ss_pred             hCCcccCCcccceEEEecCC-----eEEEEeccceeecCCc-----------cccCCC-CceeCchhhhccccccccccC
Confidence            99999999999999999887     4999999999865433           123568 999999999          55


Q ss_pred             CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhhccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHH
Q 005221          335 RTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCKKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYI  414 (708)
Q Consensus       335 ~~~s~~~DIwSlGviL~eLltG~~Pf~~~~~~~~~~~i~~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~  414 (708)
                      ..++.++|||||||+||+|++|+.||.+.........+....         ..+|                     ..+.
T Consensus       292 ~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~---------~~~~---------------------~~~~  341 (413)
T 3dzo_A          292 TLMTFAFDTWTLGLAIYWIWCADLPNTDDAALGGSEWIFRSC---------KNIP---------------------QPVR  341 (413)
T ss_dssp             EEECHHHHHHHHHHHHHHHHHSSCCCCTTGGGSCSGGGGSSC---------CCCC---------------------HHHH
T ss_pred             cCCCchhhHHHHHHHHHHHHHCCCCCCCcchhhhHHHHHhhc---------ccCC---------------------HHHH
Confidence            668999999999999999999999998765433322221100         0111                     4789


Q ss_pred             HHHHhhhCCCCCCCCcchHHHHhHHHHhcc
Q 005221          415 SLFDGIVGPNPDIRPISTEGAQKLIYQVGH  444 (708)
Q Consensus       415 ~LL~~mL~~dP~~Rps~~e~l~h~~f~~~~  444 (708)
                      +||.+||..||++||++.++++||||+...
T Consensus       342 ~li~~~l~~dP~~Rpt~~~~l~~~~~~~~~  371 (413)
T 3dzo_A          342 ALLEGFLRYPKEDRLLPLQAMETPEYEQLR  371 (413)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHTTSHHHHHHH
T ss_pred             HHHHHHccCChhhCcCHHHHHhCHHHHHHH
Confidence            999999999999999999999999997543


No 232
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00  E-value=1.1e-38  Score=338.31  Aligned_cols=259  Identities=14%  Similarity=0.147  Sum_probs=191.1

Q ss_pred             CCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCC--CCCCChHHHHHHHHcCCCCCccEEEEE
Q 005221          138 SPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKG--CNYGPPYEWQVYNTLGGSHGVPRVHFK  215 (708)
Q Consensus       138 ~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~--~~~~~~~Ei~il~~L~h~~~v~~~~~~  215 (708)
                      .++|++.+.||+|+||.||+|++...       ..++..||+|++......  ....+.+|+.++++|+|+|++..+..+
T Consensus        33 ~~~y~~~~~lg~G~~g~V~~~~~~~~-------~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~  105 (313)
T 3brb_A           33 RNLLILGKILGEGEFGSVMEGNLKQE-------DGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVC  105 (313)
T ss_dssp             GGGEEEEEEEEC-CCCCEEEEEEECT-------TSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEE
T ss_pred             HHHeeeccceeecCCeEEEEEEEecc-------CCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEE
Confidence            45799999999999999999988651       125678999998765321  123467899999999999988887776


Q ss_pred             eeeCC----EEEEEEecC-CCCHHHHHhc-----cCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCC
Q 005221          216 GRQGD----YYVMVMDML-GPSLWDVWNN-----NSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGT  285 (708)
Q Consensus       216 ~~~~~----~~~lvme~~-ggsL~~~l~~-----~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~  285 (708)
                      .....    ..++|||++ +++|.+++..     ....+++..++.++.||+.||.|||++||+||||||+|||++.++ 
T Consensus       106 ~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~-  184 (313)
T 3brb_A          106 IEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCMLRDDM-  184 (313)
T ss_dssp             EC-------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCSGGGEEECTTS-
T ss_pred             eeccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCC-
Confidence            54332    469999999 8899999843     234699999999999999999999999999999999999998877 


Q ss_pred             CCCCcEEEeccCccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCC
Q 005221          286 PDEKKLFLVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLR-GRLPWQGYQ  364 (708)
Q Consensus       286 ~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLlt-G~~Pf~~~~  364 (708)
                          .+||+|||+++........      .......+|+.|+|||++.+..++.++|||||||+||+|++ |.+||.+..
T Consensus       185 ----~~kl~Dfg~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~  254 (313)
T 3brb_A          185 ----TVCVADFGLSKKIYSGDYY------RQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQ  254 (313)
T ss_dssp             ----CEEECSCSCC----------------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred             ----cEEEeecCcceeccccccc------CcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCC
Confidence                5999999999876543211      11223458899999999999999999999999999999999 999998865


Q ss_pred             CCCchhhhhhhccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhHH
Q 005221          365 GENKGFLVCKKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKLI  439 (708)
Q Consensus       365 ~~~~~~~i~~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~~  439 (708)
                      .......+......    ..+..++                     ..+.+||.+||..||.+||++.++++++-
T Consensus       255 ~~~~~~~~~~~~~~----~~~~~~~---------------------~~l~~li~~~l~~dp~~Rps~~~l~~~L~  304 (313)
T 3brb_A          255 NHEMYDYLLHGHRL----KQPEDCL---------------------DELYEIMYSCWRTDPLDRPTFSVLRLQLE  304 (313)
T ss_dssp             GGGHHHHHHTTCCC----CCBTTCC---------------------HHHHHHHHHTTCSSGGGSCCHHHHHHHHH
T ss_pred             HHHHHHHHHcCCCC----CCCcccc---------------------HHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence            54443333322211    1112223                     36778888888888888888888887753


No 233
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00  E-value=6.2e-39  Score=343.26  Aligned_cols=262  Identities=17%  Similarity=0.181  Sum_probs=201.5

Q ss_pred             CCCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCC-CCCCCChHHHHHHHHc-CCCCCccEEEE
Q 005221          137 GSPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSK-GCNYGPPYEWQVYNTL-GGSHGVPRVHF  214 (708)
Q Consensus       137 ~~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~-~~~~~~~~Ei~il~~L-~h~~~v~~~~~  214 (708)
                      ..++|++.+.||+|+||.||+|++.....     ......||+|++..... .....+.+|+.+++.| +|+|++..+. 
T Consensus        44 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~-----~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~-  117 (333)
T 2i1m_A           44 PRNNLQFGKTLGAGAFGKVVEATAFGLGK-----EDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLG-  117 (333)
T ss_dssp             CTTSEEEEEEEEECSSEEEEEEEETTCSS-----SCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEE-
T ss_pred             CHHHceeeeEeccCCCcceEEEEecCCCc-----ccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEE-
Confidence            34689999999999999999999865110     11345899999876532 1233577899999999 7777665555 


Q ss_pred             EeeeCCEEEEEEecC-CCCHHHHHhcc-------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEe
Q 005221          215 KGRQGDYYVMVMDML-GPSLWDVWNNN-------------SHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLL  280 (708)
Q Consensus       215 ~~~~~~~~~lvme~~-ggsL~~~l~~~-------------~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl  280 (708)
                      ++..++.+++||||+ +++|.+++...             ...+++..++.++.||+.||.|||++||+||||||+|||+
T Consensus       118 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~  197 (333)
T 2i1m_A          118 ACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLL  197 (333)
T ss_dssp             EECSSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGCEE
T ss_pred             EEecCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCcccCCcccceEEE
Confidence            446677799999999 78999998753             2358999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCcEEEeccCccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCC
Q 005221          281 GPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLR-GRLP  359 (708)
Q Consensus       281 ~~~g~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLlt-G~~P  359 (708)
                      +.++     .+||+|||+++.........      ......||+.|+|||++.+..++.++|||||||+||+|++ |..|
T Consensus       198 ~~~~-----~~kl~Dfg~~~~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p  266 (333)
T 2i1m_A          198 TNGH-----VAKIGDFGLARDIMNDSNYI------VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNP  266 (333)
T ss_dssp             EGGG-----EEEBCCCGGGCCGGGCTTSE------ECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCS
T ss_pred             CCCC-----eEEECcccccccccccccee------ecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCC
Confidence            8776     69999999998765443211      1123558899999999999999999999999999999998 9999


Q ss_pred             CCCCCCCCchhhhhhhccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhHH
Q 005221          360 WQGYQGENKGFLVCKKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKLI  439 (708)
Q Consensus       360 f~~~~~~~~~~~i~~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~~  439 (708)
                      |.+.........+........   .+..+|                     ..+.+||.+||..||.+|||+.|+++++-
T Consensus       267 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~---------------------~~l~~li~~~l~~~p~~Rps~~~l~~~L~  322 (333)
T 2i1m_A          267 YPGILVNSKFYKLVKDGYQMA---QPAFAP---------------------KNIYSIMQACWALEPTHRPTFQQICSFLQ  322 (333)
T ss_dssp             STTCCSSHHHHHHHHHTCCCC---CCTTCC---------------------HHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             CcccchhHHHHHHHhcCCCCC---CCCCCC---------------------HHHHHHHHHHhccChhhCcCHHHHHHHHH
Confidence            987655443333332222111   111122                     46788899999999999999999888753


No 234
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00  E-value=7.1e-39  Score=343.59  Aligned_cols=262  Identities=17%  Similarity=0.186  Sum_probs=197.6

Q ss_pred             CCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCC-CCCCCChHHHHHHHHc-CCCCCccEEEEE
Q 005221          138 SPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSK-GCNYGPPYEWQVYNTL-GGSHGVPRVHFK  215 (708)
Q Consensus       138 ~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~-~~~~~~~~Ei~il~~L-~h~~~v~~~~~~  215 (708)
                      .++|++++.||+|+||.||+|++...   ......++..||||++..... .....+.+|+.++++| +|+|++..+. +
T Consensus        34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~---~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~-~  109 (334)
T 2pvf_A           34 RDKLTLGKPLGEGAFGQVVMAEAVGI---DKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLG-A  109 (334)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTC---STTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEE-E
T ss_pred             HhHeEEeeEEeecCceeEEEeEeccc---cccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEE-E
Confidence            35799999999999999999998531   011123578899999876532 1223467899999999 6777555554 4


Q ss_pred             eeeCCEEEEEEecC-CCCHHHHHhccC---------------CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEE
Q 005221          216 GRQGDYYVMVMDML-GPSLWDVWNNNS---------------HTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFL  279 (708)
Q Consensus       216 ~~~~~~~~lvme~~-ggsL~~~l~~~~---------------~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NIL  279 (708)
                      +...+.+++||||+ +++|.+++....               ..+++..++.++.||+.||.|||++||+||||||+|||
T Consensus       110 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIl  189 (334)
T 2pvf_A          110 CTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVL  189 (334)
T ss_dssp             ECSSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEE
T ss_pred             EccCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCccceEE
Confidence            56677899999999 889999997653               24899999999999999999999999999999999999


Q ss_pred             eCCCCCCCCCcEEEeccCccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCC
Q 005221          280 LGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLR-GRL  358 (708)
Q Consensus       280 l~~~g~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLlt-G~~  358 (708)
                      ++.++     .+||+|||+++.........      ......+|+.|+|||++.+..++.++|||||||+||+|++ |..
T Consensus       190 l~~~~-----~~kL~Dfg~~~~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~  258 (334)
T 2pvf_A          190 VTENN-----VMKIADFGLARDINNIDYYK------KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGS  258 (334)
T ss_dssp             ECTTC-----CEEECCCTTCEECTTTSSEE------CCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCC
T ss_pred             EcCCC-----CEEEcccccccccccccccc------ccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCC
Confidence            98777     59999999998765432211      1123457899999999999999999999999999999999 999


Q ss_pred             CCCCCCCCCchhhhhhhccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhH
Q 005221          359 PWQGYQGENKGFLVCKKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKL  438 (708)
Q Consensus       359 Pf~~~~~~~~~~~i~~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~  438 (708)
                      ||.+....+....+.......    .+..++                     ..+.+||.+||..||.+||++.|+++++
T Consensus       259 p~~~~~~~~~~~~~~~~~~~~----~~~~~~---------------------~~l~~li~~~l~~dp~~Rps~~ell~~L  313 (334)
T 2pvf_A          259 PYPGIPVEELFKLLKEGHRMD----KPANCT---------------------NELYMMMRDCWHAVPSQRPTFKQLVEDL  313 (334)
T ss_dssp             SSTTCCHHHHHHHHHHTCCCC----CCTTCC---------------------HHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             CcCcCCHHHHHHHHhcCCCCC----CCccCC---------------------HHHHHHHHHHccCChhhCcCHHHHHHHH
Confidence            998755433322222221111    112223                     3677788888888888888888888775


Q ss_pred             H
Q 005221          439 I  439 (708)
Q Consensus       439 ~  439 (708)
                      -
T Consensus       314 ~  314 (334)
T 2pvf_A          314 D  314 (334)
T ss_dssp             H
T ss_pred             H
Confidence            3


No 235
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00  E-value=2.1e-38  Score=367.74  Aligned_cols=260  Identities=18%  Similarity=0.176  Sum_probs=199.1

Q ss_pred             CCCeEEEE-eEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCC-CCCCCChHHHHHHHHcCCCCCccEEEEE
Q 005221          138 SPMYRLER-KLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSK-GCNYGPPYEWQVYNTLGGSHGVPRVHFK  215 (708)
Q Consensus       138 ~~~Y~i~~-~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~-~~~~~~~~Ei~il~~L~h~~~v~~~~~~  215 (708)
                      .+++.+.+ +||+|+||.||+|.+...        ..+..||||+++.... .....+.+|+++|+.|+|+|+|..+..+
T Consensus       334 ~~~~~~~~~~LG~G~fG~Vy~~~~~~~--------~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~  405 (613)
T 2ozo_A          334 RDNLLIADIELGCGNFGSVRQGVYRMR--------KKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC  405 (613)
T ss_dssp             TTSEEEEEEEEEECSSSEEEEEEEECS--------SCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEE
T ss_pred             ccceeEcCcEEecCCCcEEEEEEEecC--------CCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEe
Confidence            34566666 899999999999988641        1467899999986532 2334578999999999999988877765


Q ss_pred             eeeCCEEEEEEecC-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcEEEe
Q 005221          216 GRQGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLV  294 (708)
Q Consensus       216 ~~~~~~~~lvme~~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~vkL~  294 (708)
                      . . +.++|||||+ +|+|.+++......+++..++.|+.||+.||+|||++|||||||||+||||+.++     .+||+
T Consensus       406 ~-~-~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiHrDlkp~NILl~~~~-----~vkL~  478 (613)
T 2ozo_A          406 Q-A-EALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRH-----YAKIS  478 (613)
T ss_dssp             E-S-SSEEEEEECCTTCBHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETT-----EEEEC
T ss_pred             c-c-CCeEEEEEeCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCcCCHHHEEEcCCC-----cEEEe
Confidence            3 3 4589999999 8999999987766799999999999999999999999999999999999998777     69999


Q ss_pred             ccCccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCCchhhhh
Q 005221          295 DLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLR-GRLPWQGYQGENKGFLVC  373 (708)
Q Consensus       295 DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLlt-G~~Pf~~~~~~~~~~~i~  373 (708)
                      |||+++.+........     ......+|+.|+|||++.+..++.++|||||||+||||++ |+.||.+....+....+.
T Consensus       479 DFGla~~~~~~~~~~~-----~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~  553 (613)
T 2ozo_A          479 DFGLSKALGADDSYYT-----ARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIE  553 (613)
T ss_dssp             CCSTTTTCC-------------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHHHHHHHH
T ss_pred             eccCcccccCCCceee-----eccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
Confidence            9999987654322111     1112346789999999999999999999999999999998 999999876655444444


Q ss_pred             hhccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHH---HhHHHHh
Q 005221          374 KKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGA---QKLIYQV  442 (708)
Q Consensus       374 ~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l---~h~~f~~  442 (708)
                      .......    +..+|                     ..+.+||.+|+..||++||++.+++   ++.|+..
T Consensus       554 ~~~~~~~----p~~~~---------------------~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~~  600 (613)
T 2ozo_A          554 QGKRMEC----PPECP---------------------PELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSL  600 (613)
T ss_dssp             TTCCCCC----CTTCC---------------------HHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHHHH
T ss_pred             cCCCCCC----CCcCC---------------------HHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHh
Confidence            3322211    12233                     4667888888888888888888864   4455444


No 236
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00  E-value=9.3e-39  Score=330.40  Aligned_cols=246  Identities=11%  Similarity=0.087  Sum_probs=192.9

Q ss_pred             CCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCC--CCCCCChHHHHHHHHcCCCCCccEEEEEe
Q 005221          139 PMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSK--GCNYGPPYEWQVYNTLGGSHGVPRVHFKG  216 (708)
Q Consensus       139 ~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~--~~~~~~~~Ei~il~~L~h~~~v~~~~~~~  216 (708)
                      ++|++.+.||+|+||.||+|++            .+..||+|++.....  .....+.+|+.++++|+|+|++..+..+.
T Consensus        10 ~~y~~~~~lg~G~~g~V~~~~~------------~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~   77 (271)
T 3kmu_A           10 KQLNFLTKLNENHSGELWKGRW------------QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQ   77 (271)
T ss_dssp             GGCEEEEEEEEETTEEEEEEEE------------TTEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEEC
T ss_pred             HHhHHHHHhcCCCcceEEEEEE------------CCeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEc
Confidence            4799999999999999999998            467899999876532  12234778999999999999777776654


Q ss_pred             ee-CCEEEEEEecC-CCCHHHHHhccCC-CCCHHHHHHHHHHHHHHHHHHHhCC--ceecCCCCCcEEeCCCCCCCCCcE
Q 005221          217 RQ-GDYYVMVMDML-GPSLWDVWNNNSH-TMSIEMVACIAIEAISILEKMHSKG--YVHGDVKPENFLLGPPGTPDEKKL  291 (708)
Q Consensus       217 ~~-~~~~~lvme~~-ggsL~~~l~~~~~-~l~~~~~~~i~~qil~aL~yLH~~g--IvHrDIKP~NILl~~~g~~~~~~v  291 (708)
                      .. ...+++||||+ +++|.+++..... .+++..++.++.||+.||.|||++|  |+||||||+|||++.++     .+
T Consensus        78 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~-----~~  152 (271)
T 3kmu_A           78 SPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDM-----TA  152 (271)
T ss_dssp             TTTSSSCEEEEECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEECTTS-----CE
T ss_pred             cCCCCCeEeeecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCccceEEEcCCc-----ce
Confidence            33 37889999999 7899999987643 5999999999999999999999999  99999999999999877     48


Q ss_pred             EEeccCccccccCCCCCccccccCCCceeeccccccchhhhcCCCCC---chhhHHHHHHHHHHHHhCCCCCCCCCCCCc
Q 005221          292 FLVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGS---RRDDLESLAYTLIFLLRGRLPWQGYQGENK  368 (708)
Q Consensus       292 kL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s---~~~DIwSlGviL~eLltG~~Pf~~~~~~~~  368 (708)
                      +|+|||++......             ..+||+.|+|||++.+..++   .++|||||||++|+|++|+.||.+.+....
T Consensus       153 ~l~~~~~~~~~~~~-------------~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~  219 (271)
T 3kmu_A          153 RISMADVKFSFQSP-------------GRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEI  219 (271)
T ss_dssp             EEEGGGSCCTTSCT-------------TCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHH
T ss_pred             eEEeccceeeeccc-------------CccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHH
Confidence            99988887643221             24589999999999887554   489999999999999999999987654433


Q ss_pred             hhhhhhhccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhH
Q 005221          369 GFLVCKKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKL  438 (708)
Q Consensus       369 ~~~i~~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~  438 (708)
                      ...+.....   ...++..+|                     ..+.+||.+||..||++|||+.++++.+
T Consensus       220 ~~~~~~~~~---~~~~~~~~~---------------------~~~~~li~~~l~~~p~~Rps~~~il~~L  265 (271)
T 3kmu_A          220 GMKVALEGL---RPTIPPGIS---------------------PHVSKLMKICMNEDPAKRPKFDMIVPIL  265 (271)
T ss_dssp             HHHHHHSCC---CCCCCTTCC---------------------HHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             HHHHHhcCC---CCCCCCCCC---------------------HHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence            333322221   112222333                     3567788888888888888888887664


No 237
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00  E-value=2.2e-38  Score=334.86  Aligned_cols=261  Identities=20%  Similarity=0.202  Sum_probs=197.9

Q ss_pred             CeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCC----CCCCChHHHHHHHHcCCCCCccEEEEE
Q 005221          140 MYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKG----CNYGPPYEWQVYNTLGGSHGVPRVHFK  215 (708)
Q Consensus       140 ~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~----~~~~~~~Ei~il~~L~h~~~v~~~~~~  215 (708)
                      .|...++||+|+||.||+|++            .+..||+|++......    ....+.+|+.+++.|+|+|++..+..+
T Consensus        32 ~~~~~~~lg~G~~g~Vy~~~~------------~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~   99 (307)
T 2nru_A           32 ISVGGNKMGEGGFGVVYKGYV------------NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFS   99 (307)
T ss_dssp             TTTTCCEEEECSSEEEEEEES------------SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             ccccCCccccCCCeEEEEEEE------------CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCCeEEEEEEE
Confidence            355668999999999999986            4678999998764321    123467899999999998866655554


Q ss_pred             eeeCCEEEEEEecC-CCCHHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcEE
Q 005221          216 GRQGDYYVMVMDML-GPSLWDVWNNN--SHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLF  292 (708)
Q Consensus       216 ~~~~~~~~lvme~~-ggsL~~~l~~~--~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~vk  292 (708)
                       ..++.+++|||++ +++|.+++...  ...+++..++.++.||+.||.|||++||+||||||+|||++.++     .+|
T Consensus       100 -~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nili~~~~-----~~k  173 (307)
T 2nru_A          100 -SDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAF-----TAK  173 (307)
T ss_dssp             -CSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTC-----CEE
T ss_pred             -ecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEcCCC-----cEE
Confidence             5667789999999 89999998743  34699999999999999999999999999999999999998777     599


Q ss_pred             EeccCccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCchhhh
Q 005221          293 LVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLV  372 (708)
Q Consensus       293 L~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLltG~~Pf~~~~~~~~~~~i  372 (708)
                      |+|||+++.........      .....+||+.|+|||++.+ .++.++|||||||++|+|++|.+||...........+
T Consensus       174 l~Dfg~~~~~~~~~~~~------~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~  246 (307)
T 2nru_A          174 ISDFGLARASEKFAQTV------MTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDI  246 (307)
T ss_dssp             ECCCTTCEECCSCSSCE------ECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHH
T ss_pred             Eeecccccccccccccc------cccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHH
Confidence            99999998765432211      1123569999999999876 4789999999999999999999999986655443333


Q ss_pred             hhhccCCCCCCccCCCChHHHHHHHHHHcCCCCC--cccHHHHHHHHHhhhCCCCCCCCcchHHHHhH
Q 005221          373 CKKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDE--EPNYAKYISLFDGIVGPNPDIRPISTEGAQKL  438 (708)
Q Consensus       373 ~~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~--rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~  438 (708)
                      ......... .        +..+    .......  ......+.+++.+||..||.+||++.++++++
T Consensus       247 ~~~~~~~~~-~--------~~~~----~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L  301 (307)
T 2nru_A          247 KEEIEDEEK-T--------IEDY----IDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLL  301 (307)
T ss_dssp             HHHHHTTSC-C--------HHHH----SCSSCSCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHH
T ss_pred             HHHhhhhhh-h--------hhhh----ccccccccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHH
Confidence            222111100 0        1111    1111111  11235789999999999999999999999885


No 238
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=3e-38  Score=337.78  Aligned_cols=261  Identities=20%  Similarity=0.278  Sum_probs=188.8

Q ss_pred             CCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCCCCCCChHHHHHHHHc--CCCCCccEEEEEe
Q 005221          139 PMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNTL--GGSHGVPRVHFKG  216 (708)
Q Consensus       139 ~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~~~~~~~~Ei~il~~L--~h~~~v~~~~~~~  216 (708)
                      ++|+++++||+|+||.||+|++            .++.||||++.....   ....+|.+++..+  +|+|++..+..+.
T Consensus        37 ~~y~~~~~lg~G~~g~V~~~~~------------~~~~vavK~~~~~~~---~~~~~e~~~~~~~~~~h~~i~~~~~~~~  101 (337)
T 3mdy_A           37 KQIQMVKQIGKGRYGEVWMGKW------------RGEKVAVKVFFTTEE---ASWFRETEIYQTVLMRHENILGFIAADI  101 (337)
T ss_dssp             HHCEEEEEEEEETTEEEEEEEE------------TTEEEEEEEEEGGGH---HHHHHHHHHHTSTTCCCTTBCCEEEEEE
T ss_pred             cceEEEeEeecCCCeEEEEEEE------------CCceEEEEEEecccc---chhhhHHHHHHHHhhcCCCeeeEEEEEc
Confidence            5799999999999999999987            468999999865422   2334566666554  8888777666554


Q ss_pred             eeC---CEEEEEEecC-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC--------CceecCCCCCcEEeCCCC
Q 005221          217 RQG---DYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSK--------GYVHGDVKPENFLLGPPG  284 (708)
Q Consensus       217 ~~~---~~~~lvme~~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~--------gIvHrDIKP~NILl~~~g  284 (708)
                      ...   ..++|||||+ +++|.+++...  .+++..++.++.|++.||.|||++        |||||||||+||||+.++
T Consensus       102 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~  179 (337)
T 3mdy_A          102 KGTGSWTQLYLITDYHENGSLYDYLKST--TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNG  179 (337)
T ss_dssp             ESCGGGCEEEEEECCCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTS
T ss_pred             cCCCCCCceEEEEeccCCCcHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCC
Confidence            332   7899999999 88999999764  599999999999999999999999        999999999999998877


Q ss_pred             CCCCCcEEEeccCccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCch------hhHHHHHHHHHHHHhC--
Q 005221          285 TPDEKKLFLVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRR------DDLESLAYTLIFLLRG--  356 (708)
Q Consensus       285 ~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~------~DIwSlGviL~eLltG--  356 (708)
                           .+||+|||+++.+........    ......+||+.|+|||++.+..++..      +|||||||+||||++|  
T Consensus       180 -----~~kl~Dfg~a~~~~~~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~  250 (337)
T 3mdy_A          180 -----TCCIADLGLAVKFISDTNEVD----IPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCV  250 (337)
T ss_dssp             -----CEEECCCTTCEECC-------------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBC
T ss_pred             -----CEEEEeCCCceeecccccccc----CCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccC
Confidence                 599999999987655432211    11234579999999999988776654      9999999999999999  


Q ss_pred             --------CCCCCCCCCCCchhhhhhhccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCC
Q 005221          357 --------RLPWQGYQGENKGFLVCKKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIR  428 (708)
Q Consensus       357 --------~~Pf~~~~~~~~~~~i~~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~R  428 (708)
                              ..||....................  .+....|..+            ....-...+.+|+.+||..||++|
T Consensus       251 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~------------~~~~~~~~l~~li~~~l~~dP~~R  316 (337)
T 3mdy_A          251 SGGIVEEYQLPYHDLVPSDPSYEDMREIVCIK--KLRPSFPNRW------------SSDECLRQMGKLMTECWAHNPASR  316 (337)
T ss_dssp             BTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTS--CCCCCCCGGG------------GGSHHHHHHHHHHHHHSCSSGGGS
T ss_pred             cccccccccccHhhhcCCCCchhhhHHHHhhh--ccCccccccc------------hhhHHHHHHHHHHHHhhhhChhhC
Confidence                    555554333222111111100000  0000000000            000112468999999999999999


Q ss_pred             CcchHHHHhHH
Q 005221          429 PISTEGAQKLI  439 (708)
Q Consensus       429 ps~~e~l~h~~  439 (708)
                      ||+.++++++-
T Consensus       317 ps~~ell~~L~  327 (337)
T 3mdy_A          317 LTALRVKKTLA  327 (337)
T ss_dssp             CCHHHHHHHHH
T ss_pred             CCHHHHHHHHH
Confidence            99999999864


No 239
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00  E-value=1.5e-38  Score=363.37  Aligned_cols=253  Identities=21%  Similarity=0.238  Sum_probs=189.4

Q ss_pred             CCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCCCCCCChHHHHHHHHcCCCCCccEEEEEee
Q 005221          138 SPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNTLGGSHGVPRVHFKGR  217 (708)
Q Consensus       138 ~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~~~~~~~~Ei~il~~L~h~~~v~~~~~~~~  217 (708)
                      .++|++.++||+|+||.||+|++..           +..||||+++.... ....+.+|+++|+.|+|+|+|..+..+..
T Consensus       266 ~~~~~~~~~lG~G~fg~Vy~~~~~~-----------~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~  333 (535)
T 2h8h_A          266 RESLRLEVKLGQGCFGEVWMGTWNG-----------TTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE  333 (535)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETT-----------TEEEEEEEECTTSS-CHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred             hhhhhhheecccCCCeEEEEEEECC-----------CceEEEEEeCCCCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEee
Confidence            4579999999999999999999854           46799999976532 23457899999999999998887766533


Q ss_pred             eCCEEEEEEecC-CCCHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcEEEec
Q 005221          218 QGDYYVMVMDML-GPSLWDVWNNN-SHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVD  295 (708)
Q Consensus       218 ~~~~~~lvme~~-ggsL~~~l~~~-~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~vkL~D  295 (708)
                        +.++|||||+ +++|.+++... +..+++..++.|+.||+.||.|||++|||||||||+||||+.++     .+||+|
T Consensus       334 --~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~-----~~kl~D  406 (535)
T 2h8h_A          334 --EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENL-----VCKVAD  406 (535)
T ss_dssp             --SSCEEEECCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGG-----CEEECC
T ss_pred             --ccceEeeehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEEcCCC-----cEEEcc
Confidence              5688999999 88999999753 34699999999999999999999999999999999999998776     599999


Q ss_pred             cCccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCCchhhhhh
Q 005221          296 LGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLR-GRLPWQGYQGENKGFLVCK  374 (708)
Q Consensus       296 FGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLlt-G~~Pf~~~~~~~~~~~i~~  374 (708)
                      ||+++.......       .......+|+.|+|||++.+..++.++|||||||+||||++ |+.||.+....+....+..
T Consensus       407 FG~a~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~~~~~i~~  479 (535)
T 2h8h_A          407 FGLARLIEDNEY-------TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER  479 (535)
T ss_dssp             TTSTTTCCCHHH-------HTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHHHHHHHHT
T ss_pred             cccceecCCCce-------ecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc
Confidence            999987643210       01112347889999999999999999999999999999999 9999988655444333333


Q ss_pred             hccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhh
Q 005221          375 KKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGI  420 (708)
Q Consensus       375 ~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~m  420 (708)
                      .....    .+..+|..+.+++..||..++.+||++.+++++|+.+
T Consensus       480 ~~~~~----~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~  521 (535)
T 2h8h_A          480 GYRMP----CPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY  521 (535)
T ss_dssp             TCCCC----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred             CCCCC----CCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence            22111    1234554444444444444444444444444433333


No 240
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00  E-value=1.5e-38  Score=339.92  Aligned_cols=273  Identities=16%  Similarity=0.103  Sum_probs=202.0

Q ss_pred             CCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCCCCCCChHHHHHHHHcCCCCCccEEEEEeee
Q 005221          139 PMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNTLGGSHGVPRVHFKGRQ  218 (708)
Q Consensus       139 ~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~~~~~~~~Ei~il~~L~h~~~v~~~~~~~~~  218 (708)
                      .+|++++.||+|+||.||+|+....      ...+++.||||++..........+.+|+.+++.|+|+|++..+..+...
T Consensus        41 ~~y~~~~~lg~G~~g~V~~~~~~~~------~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~  114 (326)
T 2w1i_A           41 RHLKFLQQLGKGNFGSVEMCRYDPL------QDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSA  114 (326)
T ss_dssp             GGEEEEEEEECCSSEEEEEEEECTT------SSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC-
T ss_pred             HHceeeeeeccCCCeEEEEEEeccc------cCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEec
Confidence            4799999999999999999985320      1126899999999875444344678899999999999988777765433


Q ss_pred             -CCEEEEEEecC-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcEEEecc
Q 005221          219 -GDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDL  296 (708)
Q Consensus       219 -~~~~~lvme~~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~vkL~DF  296 (708)
                       ...+++|||++ +++|.+++......+++..++.++.||+.||.|||++||+||||||+|||++.++     .+||+||
T Consensus       115 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~-----~~kL~Df  189 (326)
T 2w1i_A          115 GRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENEN-----RVKIGDF  189 (326)
T ss_dssp             ---CCEEEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETT-----EEEECCC
T ss_pred             CCCceEEEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEEcCCC-----cEEEecC
Confidence             34789999999 8899999988766799999999999999999999999999999999999998777     6999999


Q ss_pred             CccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhhc
Q 005221          297 GLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCKKK  376 (708)
Q Consensus       297 Gla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLltG~~Pf~~~~~~~~~~~i~~~~  376 (708)
                      |+++..........     ......+|+.|+|||++.+..++.++|||||||+||+|++|..||......     .....
T Consensus       190 g~~~~~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~-----~~~~~  259 (326)
T 2w1i_A          190 GLTKVLPQDKEYYK-----VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAE-----FMRMI  259 (326)
T ss_dssp             TTCEECCSSCSEEE-----CSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHH-----HHHHH
T ss_pred             cchhhccccccccc-----cccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHH-----HHHhh
Confidence            99987655432111     112345788999999999999999999999999999999999998742110     00000


Q ss_pred             cCCCCCCccCCCChHHHHHHHHHHcCCCCCcc--cHHHHHHHHHhhhCCCCCCCCcchHHHHhH
Q 005221          377 MATSPDGLCCFCPAPFRQFVEYVVNLKFDEEP--NYAKYISLFDGIVGPNPDIRPISTEGAQKL  438 (708)
Q Consensus       377 ~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP--~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~  438 (708)
                       .....     .......+.+.+........|  -...+.+||.+||..||++||++.|+++.+
T Consensus       260 -~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L  317 (326)
T 2w1i_A          260 -GNDKQ-----GQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRV  317 (326)
T ss_dssp             -CTTCC-----THHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHH
T ss_pred             -ccccc-----hhhhHHHHHHHhhcCCCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence             00000     000111222222221111111  125788899999999999999999988764


No 241
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00  E-value=4.6e-38  Score=366.06  Aligned_cols=251  Identities=18%  Similarity=0.177  Sum_probs=191.4

Q ss_pred             eEEE-EeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCC--CCCCChHHHHHHHHcCCCCCccEEEEEee
Q 005221          141 YRLE-RKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKG--CNYGPPYEWQVYNTLGGSHGVPRVHFKGR  217 (708)
Q Consensus       141 Y~i~-~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~--~~~~~~~Ei~il~~L~h~~~v~~~~~~~~  217 (708)
                      +.+. ++||+|+||.||+|.+..        ...++.||||+++.....  ....+.+|+++|++|+|+|+|..+..+ .
T Consensus       370 ~~l~~~~LG~G~fG~Vy~~~~~~--------~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~-~  440 (635)
T 4fl3_A          370 LTLEDKELGSGNFGTVKKGYYQM--------KKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-E  440 (635)
T ss_dssp             EEEEEEEEEECSSEEEEEEEEEC--------SSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEE-E
T ss_pred             ccccCCEeccCCCEEEEEEEEcC--------CCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEE-e
Confidence            4443 589999999999997654        115789999999865322  234578899999999999988877765 3


Q ss_pred             eCCEEEEEEecC-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcEEEecc
Q 005221          218 QGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVDL  296 (708)
Q Consensus       218 ~~~~~~lvme~~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~vkL~DF  296 (708)
                       .+.++|||||+ +++|.+++.... .+++..++.|+.||+.||+|||++|||||||||+||||+.++     .+||+||
T Consensus       441 -~~~~~lv~E~~~~g~L~~~l~~~~-~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDLkp~NILl~~~~-----~~kL~DF  513 (635)
T 4fl3_A          441 -AESWMLVMEMAELGPLNKYLQQNR-HVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQH-----YAKISDF  513 (635)
T ss_dssp             -SSSEEEEEECCTTEEHHHHHHHCT-TCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETT-----EEEECCT
T ss_pred             -cCCEEEEEEccCCCCHHHHHhhCC-CCCHHHHHHHHHHHHHHHHHHHHCCEeCCCCChHhEEEeCCC-----CEEEEEc
Confidence             34578999999 899999997654 699999999999999999999999999999999999999777     6999999


Q ss_pred             CccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCCchhhhhhh
Q 005221          297 GLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLR-GRLPWQGYQGENKGFLVCKK  375 (708)
Q Consensus       297 Gla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLlt-G~~Pf~~~~~~~~~~~i~~~  375 (708)
                      |+|+.+.......     .......||+.|+|||++.+..++.++|||||||+||||++ |+.||.+....+....+...
T Consensus       514 Gla~~~~~~~~~~-----~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~  588 (635)
T 4fl3_A          514 GLSKALRADENYY-----KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKG  588 (635)
T ss_dssp             THHHHTTC------------------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTT
T ss_pred             CCccccccCcccc-----ccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC
Confidence            9998775543211     11223457899999999999999999999999999999998 99999987655444444433


Q ss_pred             ccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHh
Q 005221          376 KMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQK  437 (708)
Q Consensus       376 ~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h  437 (708)
                      ....    .+..+|.                     .+.+||..||..||++||++.++++.
T Consensus       589 ~~~~----~p~~~~~---------------------~l~~li~~cl~~dP~~RPs~~~l~~~  625 (635)
T 4fl3_A          589 ERMG----CPAGCPR---------------------EMYDLMNLCWTYDVENRPGFAAVELR  625 (635)
T ss_dssp             CCCC----CCTTCCH---------------------HHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred             CCCC----CCCCCCH---------------------HHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence            3222    1223443                     56677777777777777777776654


No 242
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00  E-value=3.2e-38  Score=338.55  Aligned_cols=262  Identities=21%  Similarity=0.262  Sum_probs=195.9

Q ss_pred             CCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCCCCCCChHHHHHHHH--cCCCCCccEEEEE
Q 005221          138 SPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNT--LGGSHGVPRVHFK  215 (708)
Q Consensus       138 ~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~~~~~~~~Ei~il~~--L~h~~~v~~~~~~  215 (708)
                      .++|++.+.||+|+||.||+|++            +++.||||++....   ...+.+|++++..  ++|+|++..+..+
T Consensus        41 ~~~y~~~~~lg~G~~g~Vy~~~~------------~~~~vavK~~~~~~---~~~~~~e~~~~~~~~l~h~ni~~~~~~~  105 (342)
T 1b6c_B           41 ARTIVLQESIGKGRFGEVWRGKW------------RGEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAAD  105 (342)
T ss_dssp             HHHCEEEEEEEEETTEEEEEEEE------------TTEEEEEEEECGGG---HHHHHHHHHHHHHSCCCCTTBCCEEEEE
T ss_pred             cccEEEEeeecCCCCcEEEEEEE------------cCccEEEEEeCchh---HHHHHHHHHHHHHhhcCCCcEEEEEeee
Confidence            35799999999999999999987            46899999987542   2346679999988  7888877776665


Q ss_pred             eeeC---CEEEEEEecC-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH--------hCCceecCCCCCcEEeCCC
Q 005221          216 GRQG---DYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMH--------SKGYVHGDVKPENFLLGPP  283 (708)
Q Consensus       216 ~~~~---~~~~lvme~~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH--------~~gIvHrDIKP~NILl~~~  283 (708)
                      ....   ..+++||||+ +++|.+++...  .+++..++.++.||+.||.|||        ++||+||||||+||||+.+
T Consensus       106 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~  183 (342)
T 1b6c_B          106 NKDNGTWTQLWLVSDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKN  183 (342)
T ss_dssp             ECCCSSCCCEEEEECCCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTT
T ss_pred             cccCCccceeEEEEeecCCCcHHHHHhcc--CccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCC
Confidence            4443   2799999999 78999999764  5999999999999999999999        8999999999999999887


Q ss_pred             CCCCCCcEEEeccCccccccCCCCCccccccCCCceeeccccccchhhhcCCC------CCchhhHHHHHHHHHHHHhC-
Q 005221          284 GTPDEKKLFLVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRT------GSRRDDLESLAYTLIFLLRG-  356 (708)
Q Consensus       284 g~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~------~s~~~DIwSlGviL~eLltG-  356 (708)
                      +     .+||+|||++...........    ......+||+.|+|||++.+..      ++.++|||||||+||+|++| 
T Consensus       184 ~-----~~kL~Dfg~~~~~~~~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~  254 (342)
T 1b6c_B          184 G-----TCCIADLGLAVRHDSATDTID----IAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRC  254 (342)
T ss_dssp             S-----CEEECCCTTCEEEETTTTEEE----ECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTB
T ss_pred             C-----CEEEEECCCceeccccccccc----cccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhcc
Confidence            7     599999999987665432111    1123456999999999998763      34789999999999999999 


Q ss_pred             ---------CCCCCCCCCCCchhhhhhhccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCC
Q 005221          357 ---------RLPWQGYQGENKGFLVCKKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDI  427 (708)
Q Consensus       357 ---------~~Pf~~~~~~~~~~~i~~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~  427 (708)
                               ..||......+............  ..+....|..+            ........+.+||.+||..||++
T Consensus       255 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~------------~~~~~~~~l~~li~~cl~~dp~~  320 (342)
T 1b6c_B          255 SIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCE--QKLRPNIPNRW------------QSCEALRVMAKIMRECWYANGAA  320 (342)
T ss_dssp             CBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTT--SCCCCCCCGGG------------GTSHHHHHHHHHHHHHCCSSGGG
T ss_pred             CcCCcccccccCccccCcCcccHHHHHHHHHH--HHhCCCCcccc------------cchhHHHHHHHHHHHHhccChhh
Confidence                     77887654332211111100000  00000011000            00011247899999999999999


Q ss_pred             CCcchHHHHhHH
Q 005221          428 RPISTEGAQKLI  439 (708)
Q Consensus       428 Rps~~e~l~h~~  439 (708)
                      |||+.++++++-
T Consensus       321 Rps~~~i~~~L~  332 (342)
T 1b6c_B          321 RLTALRIKKTLS  332 (342)
T ss_dssp             SCCHHHHHHHHH
T ss_pred             CCCHHHHHHHHH
Confidence            999999999864


No 243
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00  E-value=3.4e-38  Score=334.93  Aligned_cols=255  Identities=18%  Similarity=0.173  Sum_probs=190.6

Q ss_pred             CCCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCC--CCCCCCChHHHHHHHHcCCCCCccEEEE
Q 005221          137 GSPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSS--KGCNYGPPYEWQVYNTLGGSHGVPRVHF  214 (708)
Q Consensus       137 ~~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~--~~~~~~~~~Ei~il~~L~h~~~v~~~~~  214 (708)
                      ..++|++.+.||+|+||.||+|++..             .||+|++....  ......+.+|+.++++++|+|++..+..
T Consensus        31 ~~~~~~~~~~lg~G~~g~V~~~~~~~-------------~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~   97 (319)
T 2y4i_B           31 PFEQLEIGELIGKGRFGQVYHGRWHG-------------EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGA   97 (319)
T ss_dssp             CCSCEECCCBCCCSSSSEEEEEEESS-------------SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEE
T ss_pred             CHHHeEEeeEeccCCceEEEEEEEcC-------------eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEE
Confidence            45689999999999999999998743             49999987542  3334568899999999999987766655


Q ss_pred             EeeeCCEEEEEEecC-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcEEE
Q 005221          215 KGRQGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFL  293 (708)
Q Consensus       215 ~~~~~~~~~lvme~~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~vkL  293 (708)
                      + ...+.+++|||++ |++|.+++...+..+++..++.++.||+.||.|||++||+||||||+|||++ ++     .+||
T Consensus        98 ~-~~~~~~~iv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~NIl~~-~~-----~~~l  170 (319)
T 2y4i_B           98 C-MSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYD-NG-----KVVI  170 (319)
T ss_dssp             E-ECSSCEEEECBCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHHHTTCCCCCCCSTTEEEC--------CCEE
T ss_pred             E-ecCCceEEEeecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChhhEEEe-CC-----CEEE
Confidence            5 5666799999999 8999999988766799999999999999999999999999999999999997 33     5999


Q ss_pred             eccCccccccCCCCCccccccCCCceeeccccccchhhhcC---------CCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q 005221          294 VDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLG---------RTGSRRDDLESLAYTLIFLLRGRLPWQGYQ  364 (708)
Q Consensus       294 ~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~---------~~~s~~~DIwSlGviL~eLltG~~Pf~~~~  364 (708)
                      +|||+++..........   ........||+.|+|||++.+         ..++.++|||||||++|+|++|+.||.+..
T Consensus       171 ~Dfg~~~~~~~~~~~~~---~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~  247 (319)
T 2y4i_B          171 TDFGLFSISGVLQAGRR---EDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQP  247 (319)
T ss_dssp             CCCSCCC-------------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCC
T ss_pred             eecCCcccccccccccc---ccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence            99999876543221111   112234569999999999875         457999999999999999999999998755


Q ss_pred             CCCchhhhhhhccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhH
Q 005221          365 GENKGFLVCKKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKL  438 (708)
Q Consensus       365 ~~~~~~~i~~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~  438 (708)
                      .......+....   .+......+|.                     .+.+||.+||..||.+|||+.++++..
T Consensus       248 ~~~~~~~~~~~~---~~~~~~~~~~~---------------------~l~~li~~~l~~~p~~Rpt~~~l~~~l  297 (319)
T 2y4i_B          248 AEAIIWQMGTGM---KPNLSQIGMGK---------------------EISDILLFCWAFEQEERPTFTKLMDML  297 (319)
T ss_dssp             HHHHHHHHHTTC---CCCCCCSSCCT---------------------THHHHHHHHHCSSTTTSCCHHHHHHHH
T ss_pred             HHHHHHHhccCC---CCCCCcCCCCH---------------------HHHHHHHHHhcCChhhCcCHHHHHHHH
Confidence            433332222221   11111122333                     456777777777777777777777654


No 244
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00  E-value=4e-37  Score=324.80  Aligned_cols=242  Identities=21%  Similarity=0.198  Sum_probs=181.0

Q ss_pred             CCeEEE-EeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCCCCCCChHHHHHH-HHcCCCCCccEEEEEe
Q 005221          139 PMYRLE-RKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVY-NTLGGSHGVPRVHFKG  216 (708)
Q Consensus       139 ~~Y~i~-~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~~~~~~~~Ei~il-~~L~h~~~v~~~~~~~  216 (708)
                      ++|.++ +.||+|+||.||+|++..          +++.||||++...     ....+|+.++ +.++|+|++..+..+.
T Consensus        17 ~~y~~~~~~lg~G~~g~V~~~~~~~----------~~~~vaiK~~~~~-----~~~~~e~~~~~~~~~h~~i~~~~~~~~   81 (299)
T 3m2w_A           17 DDYKVTSQVLGLGINGKVLQIFNKR----------TQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYE   81 (299)
T ss_dssp             GTEEEEEEEEEEETTEEEEEEEETT----------TCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEE
T ss_pred             cchhhcCcccccCCCeEEEEEEEcC----------CCcEEEEEEeccc-----HHHHHHHHHHHHhccCCCchhHHhhhh
Confidence            368887 789999999999999977          7899999998643     2467899998 5556777666555443


Q ss_pred             e---eCCEEEEEEecC-CCCHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcE
Q 005221          217 R---QGDYYVMVMDML-GPSLWDVWNNNS-HTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKL  291 (708)
Q Consensus       217 ~---~~~~~~lvme~~-ggsL~~~l~~~~-~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~v  291 (708)
                      .   ....++|||||+ +++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++..+  ....+
T Consensus        82 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~--~~~~~  159 (299)
T 3m2w_A           82 NLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKR--PNAIL  159 (299)
T ss_dssp             EEETTEEEEEEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSS--TTCCE
T ss_pred             hhcCCCceEEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEecCC--CCCcE
Confidence            2   267899999999 789999998753 4699999999999999999999999999999999999998743  12369


Q ss_pred             EEeccCccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCchhh
Q 005221          292 FLVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFL  371 (708)
Q Consensus       292 kL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLltG~~Pf~~~~~~~~~~~  371 (708)
                      ||+|||++....                              +..++.++|||||||+||+|++|++||.+.........
T Consensus       160 kl~Dfg~a~~~~------------------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~  209 (299)
T 3m2w_A          160 KLTDFGFAKETT------------------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPG  209 (299)
T ss_dssp             EECCCTTCEECT------------------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------CC
T ss_pred             EEeccccccccc------------------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHH
Confidence            999999996432                              13467899999999999999999999987544322111


Q ss_pred             hhhhccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhHHHHhccc
Q 005221          372 VCKKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKLIYQVGHK  445 (708)
Q Consensus       372 i~~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~~f~~~~~  445 (708)
                      +..... ...    ...|....           ..  -...+.+||.+||..||.+|||+.|+++||||....+
T Consensus       210 ~~~~~~-~~~----~~~~~~~~-----------~~--~~~~~~~li~~~l~~dP~~Rps~~e~l~hp~~~~~~~  265 (299)
T 3m2w_A          210 MKTRIR-MGQ----YEFPNPEW-----------SE--VSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTK  265 (299)
T ss_dssp             SCCSSC-TTC----CSSCHHHH-----------TT--SCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHTGGG
T ss_pred             HHHHHh-hcc----ccCCchhc-----------cc--CCHHHHHHHHHHcccChhhCCCHHHHhcChhhccccc
Confidence            100000 000    00111000           00  1257899999999999999999999999999987654


No 245
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00  E-value=8.4e-40  Score=344.22  Aligned_cols=256  Identities=21%  Similarity=0.260  Sum_probs=178.1

Q ss_pred             CCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCCCCCCChHHHHHHHH--cCCCCCccEEEEEe
Q 005221          139 PMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNT--LGGSHGVPRVHFKG  216 (708)
Q Consensus       139 ~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~~~~~~~~Ei~il~~--L~h~~~v~~~~~~~  216 (708)
                      ++|++.+.||+|+||.||+|++            +++.||||++....   ...+.+|.+++..  ++|+|++..+..+.
T Consensus         3 ~~y~~~~~lg~G~~g~V~~~~~------------~~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~   67 (303)
T 3gxj_A            3 RTIVLQESIGKGRFGEVWRGKW------------RGEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADN   67 (303)
T ss_dssp             GGCCCCEEEEECSSSEEEEC-C------------TTSCEEEEECC-TT---HHHHHHHHHHHTSTTCCC-CBCCEEEEEE
T ss_pred             ceeeehhhccCCCCeEEEEEEE------------cCcceEEEEecccc---hhhHHHHHHHHHHHhccCcceeeeeeecc
Confidence            4799999999999999999976            46789999986542   2345678888887  78988777776665


Q ss_pred             eeC---CEEEEEEecC-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH--------hCCceecCCCCCcEEeCCCC
Q 005221          217 RQG---DYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMH--------SKGYVHGDVKPENFLLGPPG  284 (708)
Q Consensus       217 ~~~---~~~~lvme~~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH--------~~gIvHrDIKP~NILl~~~g  284 (708)
                      ...   ..+++||||+ +++|.+++...  .+++..++.++.|++.||.|||        ++||+||||||+|||++.++
T Consensus        68 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nil~~~~~  145 (303)
T 3gxj_A           68 KDNGTWTQLWLVSDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNG  145 (303)
T ss_dssp             EECSSSEEEEEEEECCTTCCHHHHHHHC--CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC-CCCSCCCGGGC-CCTTC
T ss_pred             cCCCccceeEEEEeccCCCCHHHHHhcc--CcchHHHHHHHHHHHHHHHHHHHHHhhhccCCCEeeCcCCHHHeEECCCC
Confidence            544   2899999999 88999999764  5888999999999999999999        99999999999999999877


Q ss_pred             CCCCCcEEEeccCccccccCCCCCccccccCCCceeeccccccchhhhcCC------CCCchhhHHHHHHHHHHHHhC--
Q 005221          285 TPDEKKLFLVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGR------TGSRRDDLESLAYTLIFLLRG--  356 (708)
Q Consensus       285 ~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~------~~s~~~DIwSlGviL~eLltG--  356 (708)
                           .+||+|||+++..........    ......+||+.|+|||++.+.      .++.++|||||||+||+|++|  
T Consensus       146 -----~~kl~DFg~a~~~~~~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~  216 (303)
T 3gxj_A          146 -----TCCIADLGLAVRHDSATDTID----IAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCS  216 (303)
T ss_dssp             -----CC-BCCCCC-CCEETTTTEES----CC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBC
T ss_pred             -----CEEEeecCcceeccCCCcccc----cccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCC
Confidence                 599999999987655432211    122345799999999999876      345789999999999999999  


Q ss_pred             --------CCCCCCCCCCCchhhhhhhccCCCCCCccCCCChHHHHHHHHHHcCCCCCc----ccHHHHHHHHHhhhCCC
Q 005221          357 --------RLPWQGYQGENKGFLVCKKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEE----PNYAKYISLFDGIVGPN  424 (708)
Q Consensus       357 --------~~Pf~~~~~~~~~~~i~~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~r----P~~~~l~~LL~~mL~~d  424 (708)
                              ..||...........                  .....+........+..+    .....+.+|+.+||..|
T Consensus       217 ~~~~~~~~~~p~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d  278 (303)
T 3gxj_A          217 IGGIHEDYQLPYYDLVPSDPSVE------------------EMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYAN  278 (303)
T ss_dssp             BTTBC-CCCCTTTTTCC-CCCCC-------------------CHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSS
T ss_pred             CccccceeeccccccCCCCccHH------------------HHHHHHHHhhcCCCccccccchhhHHHHHHHHHHHhccC
Confidence                    666654322111000                  000000000000111111    11247899999999999


Q ss_pred             CCCCCcchHHHHhH
Q 005221          425 PDIRPISTEGAQKL  438 (708)
Q Consensus       425 P~~Rps~~e~l~h~  438 (708)
                      |.+|||+.++++.+
T Consensus       279 P~~Rps~~~i~~~L  292 (303)
T 3gxj_A          279 GAARLTALRIKKTL  292 (303)
T ss_dssp             GGGSCCHHHHHHHH
T ss_pred             cccCCCHHHHHHHH
Confidence            99999999998875


No 246
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00  E-value=2e-39  Score=374.79  Aligned_cols=271  Identities=17%  Similarity=0.151  Sum_probs=200.7

Q ss_pred             CCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCC-CCCCCChHHHHHHHHcCCCCCccEEEEEe-
Q 005221          139 PMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSK-GCNYGPPYEWQVYNTLGGSHGVPRVHFKG-  216 (708)
Q Consensus       139 ~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~-~~~~~~~~Ei~il~~L~h~~~v~~~~~~~-  216 (708)
                      ++|++.+.||+|+||.||+|++..          +++.||||++..... .....+.+|+.++++|+|+|++..+..+. 
T Consensus        14 grY~i~~~LG~G~fG~Vyla~~~~----------tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~   83 (676)
T 3qa8_A           14 GPWEMKERLGTGGFGYVLRWIHQD----------TGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDG   83 (676)
T ss_dssp             ---CCCCCCCBCSSSBCCCCCCTT----------TTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTT
T ss_pred             CCeEEEEEEeeCCCeEEEEEEECC----------CCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecc
Confidence            479999999999999999999877          789999999875421 12234678999999999999777666542 


Q ss_pred             ----eeCCEEEEEEecC-CCCHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCC
Q 005221          217 ----RQGDYYVMVMDML-GPSLWDVWNNNS--HTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEK  289 (708)
Q Consensus       217 ----~~~~~~~lvme~~-ggsL~~~l~~~~--~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~  289 (708)
                          ..++..++||||+ |++|.+++....  ..+++..++.|+.||+.||.|||++||+||||||+|||++.++  ...
T Consensus        84 ~~~~~~~~~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~gIVHrDLKP~NILl~~~g--~~~  161 (676)
T 3qa8_A           84 LQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGP--QRL  161 (676)
T ss_dssp             TCCCCTTSSCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTTBCCCCCCSTTEEEECCS--SSC
T ss_pred             cccccCCCeEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEeecCC--Cce
Confidence                2367789999999 999999998653  2699999999999999999999999999999999999998765  334


Q ss_pred             cEEEeccCccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCch
Q 005221          290 KLFLVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKG  369 (708)
Q Consensus       290 ~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLltG~~Pf~~~~~~~~~  369 (708)
                      .+||+|||++.........         ...+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.......
T Consensus       162 ~vKL~DFG~a~~~~~~~~~---------~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~  232 (676)
T 3qa8_A          162 IHKIIDLGYAKELDQGELC---------TEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQW  232 (676)
T ss_dssp             EEEECSCCCCCBTTSCCCC---------CCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHS
T ss_pred             eEEEccccccccccccccc---------ccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchhhh
Confidence            6999999999876544321         2356999999999999999999999999999999999999999763211000


Q ss_pred             hhhhhh-------ccCCC--CCCccCCCChHHHHHHHHHHcCCCCC-cc-cHHHHHHHHHhhhCCCCCCCCcchHHHHhH
Q 005221          370 FLVCKK-------KMATS--PDGLCCFCPAPFRQFVEYVVNLKFDE-EP-NYAKYISLFDGIVGPNPDIRPISTEGAQKL  438 (708)
Q Consensus       370 ~~i~~~-------~~~~~--p~~l~~~~p~~~~~l~~~~~~~~~~~-rP-~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~  438 (708)
                      ......       .....  ...+....|             .+.. .+ -...+.+||.+||..||++|||+.|+++|+
T Consensus       233 ~~~i~~~~~~~~~~~~~l~g~~~~~~~lp-------------~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp  299 (676)
T 3qa8_A          233 HGKVREKSNEHIVVYDDLTGAVKFSSVLP-------------TPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVG  299 (676)
T ss_dssp             STTCC------CCSCCCCSSSCCCCSSSC-------------CSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCT
T ss_pred             hhhhhcccchhhhhhhhhccccccccccC-------------CchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCH
Confidence            000000       00000  000000000             0000 01 135789999999999999999999999999


Q ss_pred             HHHhc
Q 005221          439 IYQVG  443 (708)
Q Consensus       439 ~f~~~  443 (708)
                      ||...
T Consensus       300 ~F~~l  304 (676)
T 3qa8_A          300 CFQAL  304 (676)
T ss_dssp             THHHH
T ss_pred             HHHHH
Confidence            99754


No 247
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00  E-value=2.9e-37  Score=360.66  Aligned_cols=255  Identities=20%  Similarity=0.203  Sum_probs=198.0

Q ss_pred             CCCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCC-CCCCCChHHHHHHHHcCCCCCccEEEEEe
Q 005221          138 SPMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSK-GCNYGPPYEWQVYNTLGGSHGVPRVHFKG  216 (708)
Q Consensus       138 ~~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~-~~~~~~~~Ei~il~~L~h~~~v~~~~~~~  216 (708)
                      .++|++.+.||+|+||.||+|++...       ...+..||+|.+..... .....+.+|+.+|+.++|+|++..+..+ 
T Consensus       389 ~~~y~i~~~LG~G~fG~Vy~a~~~~~-------~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~-  460 (656)
T 2j0j_A          389 RERIELGRCIGEGQFGDVHQGIYMSP-------ENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-  460 (656)
T ss_dssp             GGGEEEEEEEECCSSCCEEEEEECCS-------SSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-
T ss_pred             cccEEEeeEEeeCCCEEEEEEEEecC-------CCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEE-
Confidence            35799999999999999999998652       11467899999875422 1224577899999999999988877665 


Q ss_pred             eeCCEEEEEEecC-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcEEEec
Q 005221          217 RQGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLVD  295 (708)
Q Consensus       217 ~~~~~~~lvme~~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~vkL~D  295 (708)
                      . .+.++|||||+ +++|.+++......+++..++.++.||+.||.|||++||+||||||+|||++.++     .+||+|
T Consensus       461 ~-~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDikp~NILl~~~~-----~vkL~D  534 (656)
T 2j0j_A          461 T-ENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSND-----CVKLGD  534 (656)
T ss_dssp             C-SSSCEEEEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETT-----EEEECC
T ss_pred             e-cCceEEEEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchHhEEEeCCC-----CEEEEe
Confidence            3 45588999999 8999999987766799999999999999999999999999999999999999777     699999


Q ss_pred             cCccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCCchhhhhh
Q 005221          296 LGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLR-GRLPWQGYQGENKGFLVCK  374 (708)
Q Consensus       296 FGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLlt-G~~Pf~~~~~~~~~~~i~~  374 (708)
                      ||+++.........       .....||+.|+|||++.+..++.++|||||||+||||++ |.+||.+....+....+..
T Consensus       535 FG~a~~~~~~~~~~-------~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~~~i~~  607 (656)
T 2j0j_A          535 FGLSRYMEDSTYYK-------ASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIEN  607 (656)
T ss_dssp             CCCCCSCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHH
T ss_pred             cCCCeecCCCccee-------ccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHc
Confidence            99998765432211       123457899999999999999999999999999999997 9999998655444333333


Q ss_pred             hccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhH
Q 005221          375 KKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKL  438 (708)
Q Consensus       375 ~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~  438 (708)
                      .....    ++..+|                     ..+.+||.+||..||++||++.++++.+
T Consensus       608 ~~~~~----~~~~~~---------------------~~l~~li~~~l~~dP~~RPs~~el~~~L  646 (656)
T 2j0j_A          608 GERLP----MPPNCP---------------------PTLYSLMTKCWAYDPSRRPRFTELKAQL  646 (656)
T ss_dssp             TCCCC----CCTTCC---------------------HHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             CCCCC----CCcccc---------------------HHHHHHHHHHcCCChhHCcCHHHHHHHH
Confidence            32211    122333                     3567778888888888888888877664


No 248
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00  E-value=4.5e-38  Score=337.62  Aligned_cols=251  Identities=15%  Similarity=0.068  Sum_probs=187.3

Q ss_pred             CCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCC--------CCCCChHHHHHHHHcC------
Q 005221          139 PMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKG--------CNYGPPYEWQVYNTLG------  204 (708)
Q Consensus       139 ~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~--------~~~~~~~Ei~il~~L~------  204 (708)
                      ++|+++++||+|+||+||+|++            +++.||||++......        ....+.+|+.+|+.|+      
T Consensus        20 ~~y~~~~~lG~G~~g~V~~~~~------------~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~   87 (336)
T 2vuw_A           20 EKLQRCEKIGEGVFGEVFQTIA------------DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEV   87 (336)
T ss_dssp             HHHHTCEEEEEETTEEEEEEEE------------TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCS
T ss_pred             ccchheeeecccCceEEEEEEe------------CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccc
Confidence            4799999999999999999987            4689999999876321        1134678999999996      


Q ss_pred             ---CCCCccEEEEEee-----------------------------eCCEEEEEEecC-CCCHHHHHhccCCCCCHHHHHH
Q 005221          205 ---GSHGVPRVHFKGR-----------------------------QGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVAC  251 (708)
Q Consensus       205 ---h~~~v~~~~~~~~-----------------------------~~~~~~lvme~~-ggsL~~~l~~~~~~l~~~~~~~  251 (708)
                         |+|+|........                             ..+.+||||||+ +|+|.+.+.+  ..+++..++.
T Consensus        88 ~~~h~niv~l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~--~~~~~~~~~~  165 (336)
T 2vuw_A           88 CNRTEGFIGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT--KLSSLATAKS  165 (336)
T ss_dssp             SSBCCCBCCEEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT--TCCCHHHHHH
T ss_pred             cccCCchhhhcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh--cCCCHHHHHH
Confidence               7776666655432                             267899999999 8877777754  4699999999


Q ss_pred             HHHHHHHHHHHHH-hCCceecCCCCCcEEeCCCCCC---------------CCCcEEEeccCccccccCCCCCccccccC
Q 005221          252 IAIEAISILEKMH-SKGYVHGDVKPENFLLGPPGTP---------------DEKKLFLVDLGLATKWRDSTTGMHVEYDQ  315 (708)
Q Consensus       252 i~~qil~aL~yLH-~~gIvHrDIKP~NILl~~~g~~---------------~~~~vkL~DFGla~~~~~~~~~~~~~~~~  315 (708)
                      |+.||+.||.||| ++|||||||||+||||+.++..               ....+||+|||+|+.....          
T Consensus       166 i~~qi~~aL~~lH~~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~----------  235 (336)
T 2vuw_A          166 ILHQLTASLAVAEASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG----------  235 (336)
T ss_dssp             HHHHHHHHHHHHHHHHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT----------
T ss_pred             HHHHHHHHHHHHHHhCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC----------
Confidence            9999999999999 9999999999999999877510               1126999999999876542          


Q ss_pred             CCceeeccccccchhhhcCCCCCchhhHHHHHHH-HHHHHhCCCCCCCCCCCC-chhhhhhhccCCCCCCccCCCChHHH
Q 005221          316 RPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYT-LIFLLRGRLPWQGYQGEN-KGFLVCKKKMATSPDGLCCFCPAPFR  393 (708)
Q Consensus       316 ~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGvi-L~eLltG~~Pf~~~~~~~-~~~~i~~~~~~~~p~~l~~~~p~~~~  393 (708)
                         ..+||+.|+|||++.+.. +.++|||||+++ +++++.|..||.+..... ....+... ......    ..+....
T Consensus       236 ---~~~gt~~y~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~----~~~~~~~  306 (336)
T 2vuw_A          236 ---IVVFCDVSMDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNVLWLHYLTDKMLKQ-MTFKTK----CNTPAMK  306 (336)
T ss_dssp             ---EEECCCCTTCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHHHHHHHHHHHHHHT-CCCSSC----CCSHHHH
T ss_pred             ---cEEEeecccChhhhcCCC-ccceehhhhhCCCCcccccccCCCcchhhhhHHHHhhhhh-hccCcc----cchhhhh
Confidence               357999999999999877 999999998777 777888999985411000 00001100 000000    0000000


Q ss_pred             HHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHH-HhHHHH
Q 005221          394 QFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGA-QKLIYQ  441 (708)
Q Consensus       394 ~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l-~h~~f~  441 (708)
                      .              -...+.+||.+||..|     |+.|+| +||||+
T Consensus       307 ~--------------~s~~~~dli~~~L~~d-----sa~e~l~~Hp~f~  336 (336)
T 2vuw_A          307 Q--------------IKRKIQEFHRTMLNFS-----SATDLLCQHSLFK  336 (336)
T ss_dssp             H--------------HHHHHHHHHHHGGGSS-----SHHHHHHHCGGGC
T ss_pred             h--------------cCHHHHHHHHHHhccC-----CHHHHHhcCCCcC
Confidence            0              1257899999999976     999999 999984


No 249
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00  E-value=3.5e-37  Score=362.10  Aligned_cols=241  Identities=22%  Similarity=0.262  Sum_probs=191.8

Q ss_pred             CCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCC-CCCCCChHHHHHHHHcCCCCCccEEEEEee
Q 005221          139 PMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSK-GCNYGPPYEWQVYNTLGGSHGVPRVHFKGR  217 (708)
Q Consensus       139 ~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~-~~~~~~~~Ei~il~~L~h~~~v~~~~~~~~  217 (708)
                      ++|++++.||+|+||.||+|++...         +++.||||++..... .....+.+|+.+|..|+|+|+|..+..+..
T Consensus        80 ~~y~i~~~lg~G~~g~Vy~a~~~~~---------~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~  150 (681)
T 2pzi_A           80 GQYEVKGCIAHGGLGWIYLALDRNV---------NGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEH  150 (681)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEEGGG---------TTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEE
T ss_pred             CceEEEEEEeeCCCeEEEEEEEcCC---------CCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEee
Confidence            5899999999999999999998641         478999998865422 122346789999999999998887777655


Q ss_pred             eCC----EEEEEEecC-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcEE
Q 005221          218 QGD----YYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLF  292 (708)
Q Consensus       218 ~~~----~~~lvme~~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~vk  292 (708)
                      .+.    .+||||||+ |++|.+++..   .+++..++.|+.||+.||.|||++|||||||||+||||+.+      .+|
T Consensus       151 ~~~~~~~~~~lv~E~~~g~~L~~~~~~---~l~~~~~~~~~~qi~~aL~~lH~~giiHrDlkp~NIll~~~------~~k  221 (681)
T 2pzi_A          151 TDRHGDPVGYIVMEYVGGQSLKRSKGQ---KLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLTEE------QLK  221 (681)
T ss_dssp             ECTTSCEEEEEEEECCCCEECC----C---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSS------CEE
T ss_pred             cCCCCCceeEEEEEeCCCCcHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHCCCeecccChHHeEEeCC------cEE
Confidence            443    279999999 8899887654   69999999999999999999999999999999999999763      499


Q ss_pred             EeccCccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCchhhh
Q 005221          293 LVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLV  372 (708)
Q Consensus       293 L~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLltG~~Pf~~~~~~~~~~~i  372 (708)
                      |+|||+++.....            ...+||+.|+|||++.+.. +.++|||||||+||+|++|.+||.+......    
T Consensus       222 l~DFG~a~~~~~~------------~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~~~~~~----  284 (681)
T 2pzi_A          222 LIDLGAVSRINSF------------GYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRYVDGL----  284 (681)
T ss_dssp             ECCCTTCEETTCC------------SCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTEECSSC----
T ss_pred             EEecccchhcccC------------CccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCcccccccc----
Confidence            9999999876543            2356999999999987765 8999999999999999999999876321110    


Q ss_pred             hhhccCCCCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhHHHHh
Q 005221          373 CKKKMATSPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKLIYQV  442 (708)
Q Consensus       373 ~~~~~~~~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~~f~~  442 (708)
                              +.    ..+ ..               .....+.+||.+||..||++||++.+++.|+|+..
T Consensus       285 --------~~----~~~-~~---------------~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~  326 (681)
T 2pzi_A          285 --------PE----DDP-VL---------------KTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGV  326 (681)
T ss_dssp             --------CT----TCH-HH---------------HHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred             --------cc----ccc-cc---------------ccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHH
Confidence                    00    000 00               01247889999999999999999999999999764


No 250
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00  E-value=2e-35  Score=310.60  Aligned_cols=225  Identities=15%  Similarity=0.026  Sum_probs=174.0

Q ss_pred             CCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCCC---CCCChHHHHHHHHcCCCCCccEEEEE
Q 005221          139 PMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGC---NYGPPYEWQVYNTLGGSHGVPRVHFK  215 (708)
Q Consensus       139 ~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~~---~~~~~~Ei~il~~L~h~~~v~~~~~~  215 (708)
                      ++|++++.||+|+||.||+|++..          +++.||||++.......   ...+.+|+.++..++|+|++. ++.+
T Consensus        31 ~~y~i~~~lg~G~~g~Vy~a~~~~----------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~-~~~~   99 (286)
T 3uqc_A           31 GRYRLLIFHGGVPPLQFWQALDTA----------LDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVAR-VLDV   99 (286)
T ss_dssp             TTEEEEEEEEBSTTCEEEEEEETT----------TTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCC-EEEE
T ss_pred             CcEEEEEEEcccCCeEEEEEEecC----------CCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcce-eeEE
Confidence            589999999999999999999977          78999999998653321   145788999999999988555 5555


Q ss_pred             eeeCCEEEEEEecC-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcEEEe
Q 005221          216 GRQGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLV  294 (708)
Q Consensus       216 ~~~~~~~~lvme~~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~vkL~  294 (708)
                      +..++.+||||||+ |++|.+++..   ......+..|+.||+.||+|||++||+||||||+||||+.++     .+||+
T Consensus       100 ~~~~~~~~lv~e~~~g~~L~~~l~~---~~~~~~~~~i~~ql~~aL~~lH~~givH~Dikp~NIll~~~g-----~~kl~  171 (286)
T 3uqc_A          100 VHTRAGGLVVAEWIRGGSLQEVADT---SPSPVGAIRAMQSLAAAADAAHRAGVALSIDHPSRVRVSIDG-----DVVLA  171 (286)
T ss_dssp             EEETTEEEEEEECCCEEEHHHHHTT---CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEETTS-----CEEEC
T ss_pred             EEECCcEEEEEEecCCCCHHHHHhc---CCChHHHHHHHHHHHHHHHHHHHCCCccCCCCcccEEEcCCC-----CEEEE
Confidence            67788999999999 8899999854   246667899999999999999999999999999999999877     48887


Q ss_pred             ccCccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhh
Q 005221          295 DLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCK  374 (708)
Q Consensus       295 DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLltG~~Pf~~~~~~~~~~~i~~  374 (708)
                      ++|.                            ++       +++.++|||||||+||+|++|+.||.+.+.........+
T Consensus       172 ~~~~----------------------------~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~  216 (286)
T 3uqc_A          172 YPAT----------------------------MP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAER  216 (286)
T ss_dssp             SCCC----------------------------CT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEECCB
T ss_pred             eccc----------------------------cC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHHH
Confidence            4432                            22       368999999999999999999999998665442211111


Q ss_pred             hccCC--CCCCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhHH
Q 005221          375 KKMAT--SPDGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKLI  439 (708)
Q Consensus       375 ~~~~~--~p~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~~  439 (708)
                      .....  .+..+...+|                     ..+.+||.+||..||.+| |+.|+++.+-
T Consensus       217 ~~~~~~~~~~~~~~~~~---------------------~~l~~li~~~l~~dP~~R-s~~el~~~L~  261 (286)
T 3uqc_A          217 DTAGQPIEPADIDRDIP---------------------FQISAVAARSVQGDGGIR-SASTLLNLMQ  261 (286)
T ss_dssp             CTTSCBCCHHHHCTTSC---------------------HHHHHHHHHHHCTTSSCC-CHHHHHHHHH
T ss_pred             HhccCCCChhhcccCCC---------------------HHHHHHHHHHcccCCccC-CHHHHHHHHH
Confidence            10000  0011111222                     467888899999999999 8888887754


No 251
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.97  E-value=5.6e-31  Score=302.35  Aligned_cols=186  Identities=17%  Similarity=0.102  Sum_probs=130.9

Q ss_pred             eEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCC----------CCCCChHHHHHHHHcCCCCCccEEEEE
Q 005221          146 KLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKG----------CNYGPPYEWQVYNTLGGSHGVPRVHFK  215 (708)
Q Consensus       146 ~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~----------~~~~~~~Ei~il~~L~h~~~v~~~~~~  215 (708)
                      .++.|++|.+..++...          .|..|++|++.+....          ....+.+|+++|+++.++++|+.+..+
T Consensus       241 ~~~~~~~~~h~~~rr~~----------fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~  310 (569)
T 4azs_A          241 QPYAGAGLAHKRSRRYF----------FGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAH  310 (569)
T ss_dssp             C-C--------CCEEEE----------ECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEE
T ss_pred             ccccCCccccccccccc----------ccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEE
Confidence            45677777777777665          6888999999865321          123478899999999777778888888


Q ss_pred             eeeCCEEEEEEecC-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcEEEe
Q 005221          216 GRQGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFLV  294 (708)
Q Consensus       216 ~~~~~~~~lvme~~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~vkL~  294 (708)
                      ++++..+||||||+ |++|.++|.+.+ .+++.   .|+.||+.||+|||++|||||||||+||||+.+|     .+||+
T Consensus       311 ~ed~~~~yLVMEyv~G~~L~d~i~~~~-~l~~~---~I~~QIl~AL~ylH~~GIIHRDIKPeNILL~~dg-----~vKL~  381 (569)
T 4azs_A          311 GENAQSGWLVMEKLPGRLLSDMLAAGE-EIDRE---KILGSLLRSLAALEKQGFWHDDVRPWNVMVDARQ-----HARLI  381 (569)
T ss_dssp             EECSSEEEEEEECCCSEEHHHHHHTTC-CCCHH---HHHHHHHHHHHHHHHTTCEESCCCGGGEEECTTS-----CEEEC
T ss_pred             EEECCEEEEEEecCCCCcHHHHHHhCC-CCCHH---HHHHHHHHHHHHHHHCCceeccCchHhEEECCCC-----CEEEe
Confidence            89999999999999 999999998765 67764   5899999999999999999999999999999887     59999


Q ss_pred             ccCccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCC
Q 005221          295 DLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLP  359 (708)
Q Consensus       295 DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLltG~~P  359 (708)
                      |||+|+......+        ...+.+||+.|||||++.+. +..++|+||+|+++++|+++..+
T Consensus       382 DFGlAr~~~~~~~--------~~~t~vGTp~YmAPE~l~g~-~~~~~d~~s~g~~~~~l~~~~~~  437 (569)
T 4azs_A          382 DFGSIVTTPQDCS--------WPTNLVQSFFVFVNELFAEN-KSWNGFWRSAPVHPFNLPQPWSN  437 (569)
T ss_dssp             CCTTEESCC---C--------CSHHHHHHHHHHHHHHC------------------CCCCTTHHH
T ss_pred             ecccCeeCCCCCc--------cccCceechhhccHHHhCCC-CCCcccccccccchhhhccccch
Confidence            9999987655432        23457899999999999875 57789999999999888766444


No 252
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.92  E-value=5.9e-26  Score=259.12  Aligned_cols=191  Identities=16%  Similarity=0.099  Sum_probs=140.2

Q ss_pred             eEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCCC--------CCCChHHHHHHHHcCCCCCccEE
Q 005221          141 YRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGC--------NYGPPYEWQVYNTLGGSHGVPRV  212 (708)
Q Consensus       141 Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~~--------~~~~~~Ei~il~~L~h~~~v~~~  212 (708)
                      +...+.||+|+||.||+|..            .+..+++|.........        ...+.+|+++|++|+|+|++...
T Consensus       338 ~~~~~~LG~G~fg~Vy~~~~------------~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~  405 (540)
T 3en9_A          338 KIPEHLIGKGAEADIKRDSY------------LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPY  405 (540)
T ss_dssp             ----------CCEEEEEEEC------------SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCC
T ss_pred             CCCCCEEeeCCCEEEEEEEE------------CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceE
Confidence            35567999999999999954            46789999865432110        12357899999999999977433


Q ss_pred             EEEeeeCCEEEEEEecC-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEeCCCCCCCCCcE
Q 005221          213 HFKGRQGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKL  291 (708)
Q Consensus       213 ~~~~~~~~~~~lvme~~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NILl~~~g~~~~~~v  291 (708)
                      .+.. ..+..||||||+ |++|.+++..         +..++.||+.||.|||++|||||||||+|||++.       .+
T Consensus       406 ~~~~-~~~~~~lVmE~~~ggsL~~~l~~---------~~~i~~qi~~aL~~LH~~gIiHrDiKp~NILl~~-------~~  468 (540)
T 3en9_A          406 IFDV-DLDNKRIMMSYINGKLAKDVIED---------NLDIAYKIGEIVGKLHKNDVIHNDLTTSNFIFDK-------DL  468 (540)
T ss_dssp             EEEE-ETTTTEEEEECCCSEEHHHHSTT---------CTHHHHHHHHHHHHHHHTTEECTTCCTTSEEESS-------SE
T ss_pred             EEEE-eCCccEEEEECCCCCCHHHHHHH---------HHHHHHHHHHHHHHHHHCcCccCCCCHHHEEECC-------eE
Confidence            3322 455569999999 8999999865         5689999999999999999999999999999986       49


Q ss_pred             EEeccCccccccCCCCCccccccCCCceeeccccccchhhhcC--CCCCchhhHHHHHHHHHHHHhCCCCCC
Q 005221          292 FLVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLG--RTGSRRDDLESLAYTLIFLLRGRLPWQ  361 (708)
Q Consensus       292 kL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~--~~~s~~~DIwSlGviL~eLltG~~Pf~  361 (708)
                      ||+|||+|+......... .........++||+.|||||++.+  ..|+..+|+||..+-..+.+.++.+|.
T Consensus       469 kL~DFGla~~~~~~~~~~-~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~  539 (540)
T 3en9_A          469 YIIDFGLGKISNLDEDKA-VDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV  539 (540)
T ss_dssp             EECCCTTCEECCCHHHHH-HHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred             EEEECccCEECCCccccc-cchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence            999999999865432110 000001235789999999999987  668888999999999999888877764


No 253
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.89  E-value=2.6e-23  Score=217.87  Aligned_cols=144  Identities=15%  Similarity=0.185  Sum_probs=112.3

Q ss_pred             CCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCCC------------------CCCChHHHHHH
Q 005221          139 PMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGC------------------NYGPPYEWQVY  200 (708)
Q Consensus       139 ~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~~------------------~~~~~~Ei~il  200 (708)
                      ..|.+.+.||+|+||.||+|++ .          +++.||||+++......                  ...+.+|+.+|
T Consensus        90 ~~~~~~~~iG~G~~g~Vy~~~~-~----------~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l  158 (282)
T 1zar_A           90 KVDAIGKLMGEGKESAVFNCYS-E----------KFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRAL  158 (282)
T ss_dssp             SCSEEEEEEEECSSEEEEEEEE-T----------TTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHH
T ss_pred             eEEEecCEeccCCCceEEEEEe-C----------CCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHH
Confidence            3577779999999999999998 6          68999999987532111                  11257899999


Q ss_pred             HHcCCCCCccEEEEEeeeCCEEEEEEecC-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEE
Q 005221          201 NTLGGSHGVPRVHFKGRQGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFL  279 (708)
Q Consensus       201 ~~L~h~~~v~~~~~~~~~~~~~~lvme~~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~NIL  279 (708)
                      ++|+|   +..+..+ .. +..|+||||+ |++|.+ +..       .....++.||+.||.|||++|||||||||+|||
T Consensus       159 ~~l~~---~~v~~~~-~~-~~~~lvmE~~~g~~L~~-l~~-------~~~~~i~~qi~~~l~~lH~~giiHrDlkp~NIL  225 (282)
T 1zar_A          159 QKLQG---LAVPKVY-AW-EGNAVLMELIDAKELYR-VRV-------ENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVL  225 (282)
T ss_dssp             HHTTT---SSSCCEE-EE-ETTEEEEECCCCEEGGG-CCC-------SCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEE
T ss_pred             HhccC---CCcCeEE-ec-cceEEEEEecCCCcHHH-cch-------hhHHHHHHHHHHHHHHHHHCCCEeCCCCHHHEE
Confidence            99994   3333333 22 3468999999 789987 421       235679999999999999999999999999999


Q ss_pred             eCCCCCCCCCcEEEeccCccccccCCCCCccccccCCCceeeccccccchhhhc
Q 005221          280 LGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHL  333 (708)
Q Consensus       280 l~~~g~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~  333 (708)
                      ++ ++     .+||+|||+|+                     .+..++|||++.
T Consensus       226 l~-~~-----~vkl~DFG~a~---------------------~~~~~~a~e~l~  252 (282)
T 1zar_A          226 VS-EE-----GIWIIDFPQSV---------------------EVGEEGWREILE  252 (282)
T ss_dssp             EE-TT-----EEEECCCTTCE---------------------ETTSTTHHHHHH
T ss_pred             EE-CC-----cEEEEECCCCe---------------------ECCCCCHHHHHH
Confidence            99 66     69999999996                     456678999874


No 254
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.84  E-value=5.4e-21  Score=197.53  Aligned_cols=138  Identities=16%  Similarity=0.216  Sum_probs=107.4

Q ss_pred             CeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccE--EEEEEeecCCCCCC------------------------CCC
Q 005221          140 MYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVE--VALKFEHRSSKGCN------------------------YGP  193 (708)
Q Consensus       140 ~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~--VAlK~~~~~~~~~~------------------------~~~  193 (708)
                      -|++.+.||+|+||.||+|++..          +++.  ||||+++.......                        ..+
T Consensus        48 ~~~i~~~ig~G~~g~Vy~a~~~~----------~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  117 (258)
T 1zth_A           48 ITAMGGVISTGKEANVFYADGVF----------DGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWT  117 (258)
T ss_dssp             EEEEEEEEEECSSEEEEEEEEEE----------TTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHH
T ss_pred             chhhCCEEeecceEEEEEEEEcC----------CCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHH
Confidence            48999999999999999999865          5788  99999765321100                        135


Q ss_pred             hHHHHHHHHcCCCCC-ccEEEEEeeeCCEEEEEEecCC--C----CHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH-h
Q 005221          194 PYEWQVYNTLGGSHG-VPRVHFKGRQGDYYVMVMDMLG--P----SLWDVWNNNSHTMSIEMVACIAIEAISILEKMH-S  265 (708)
Q Consensus       194 ~~Ei~il~~L~h~~~-v~~~~~~~~~~~~~~lvme~~g--g----sL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH-~  265 (708)
                      .+|+.+|.+|.|+++ ++.+...    +..+|||||+|  |    +|.++...    +++..+..++.||+.+|.||| +
T Consensus       118 ~~E~~~l~~l~~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~----~~~~~~~~i~~qi~~~l~~lH~~  189 (258)
T 1zth_A          118 EKEFRNLERAKEAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE----LKELDVEGIFNDVVENVKRLYQE  189 (258)
T ss_dssp             HHHHHHHHHHHHTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG----GGGSCHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHhCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc----cChHHHHHHHHHHHHHHHHHHHH
Confidence            789999999988753 3444332    24689999995  3    77776533    335568899999999999999 9


Q ss_pred             CCceecCCCCCcEEeCCCCCCCCCcEEEeccCccccc
Q 005221          266 KGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKW  302 (708)
Q Consensus       266 ~gIvHrDIKP~NILl~~~g~~~~~~vkL~DFGla~~~  302 (708)
                      +|||||||||+|||++.       .++|+|||+|...
T Consensus       190 ~givHrDlkp~NILl~~-------~~~liDFG~a~~~  219 (258)
T 1zth_A          190 AELVHADLSEYNIMYID-------KVYFIDMGQAVTL  219 (258)
T ss_dssp             SCEECSSCSTTSEEESS-------SEEECCCTTCEET
T ss_pred             CCEEeCCCCHHHEEEcC-------cEEEEECcccccC
Confidence            99999999999999975       3999999999754


No 255
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.70  E-value=1.7e-17  Score=179.74  Aligned_cols=141  Identities=15%  Similarity=0.237  Sum_probs=99.9

Q ss_pred             CeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCCC-----CC----C-------------ChHHH
Q 005221          140 MYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGC-----NY----G-------------PPYEW  197 (708)
Q Consensus       140 ~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~~-----~~----~-------------~~~Ei  197 (708)
                      -|.+..+||.|+||.||+|++.           +|+.||||+++......     ..    .             ..+|.
T Consensus        96 iY~I~~~IG~Gk~a~VY~a~d~-----------~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~  164 (397)
T 4gyi_A           96 VYSVGSRIGVGKESDIMIVADE-----------KGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEF  164 (397)
T ss_dssp             CSEEEEEEEECSSEEEEEEECT-----------TCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHH
T ss_pred             EEEecCEeeeCCceEEEEEECC-----------CCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHH
Confidence            4999999999999999999873           48899999976431100     00    0             12477


Q ss_pred             HHHHHcCCCCCccEEEEEeeeCCEEEEEEecC-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCC
Q 005221          198 QVYNTLGGSHGVPRVHFKGRQGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPE  276 (708)
Q Consensus       198 ~il~~L~h~~~v~~~~~~~~~~~~~~lvme~~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDIKP~  276 (708)
                      ..|.+|.+.. ++....+....  .+|||||+ |++|.++.       ..+....++.||+.+|.+||++|||||||||.
T Consensus       165 ~nL~rL~~~g-v~vp~p~~~~~--~~LVME~i~G~~L~~l~-------~~~~~~~l~~qll~~l~~lH~~gIVHrDLKp~  234 (397)
T 4gyi_A          165 AFMKALYEEG-FPVPEPIAQSR--HTIVMSLVDALPMRQVS-------SVPDPASLYADLIALILRLAKHGLIHGDFNEF  234 (397)
T ss_dssp             HHHHHHHHTT-CSCCCEEEEET--TEEEEECCSCEEGGGCC-------CCSCHHHHHHHHHHHHHHHHHTTEECSCCSTT
T ss_pred             HHHHHHHhcC-CCCCeeeeccC--ceEEEEecCCccHhhhc-------ccHHHHHHHHHHHHHHHHHHHCCCcCCCCCHH
Confidence            7888885433 33222222222  37999999 66665432       22345678999999999999999999999999


Q ss_pred             cEEeCCCCCCCC-----CcEEEeccCcccc
Q 005221          277 NFLLGPPGTPDE-----KKLFLVDLGLATK  301 (708)
Q Consensus       277 NILl~~~g~~~~-----~~vkL~DFGla~~  301 (708)
                      ||||+.++....     ..+.|+||+-+..
T Consensus       235 NILl~~dgd~~d~~~~~~~~~iID~~Q~V~  264 (397)
T 4gyi_A          235 NILIREEKDAEDPSSITLTPIIIXFPQMVS  264 (397)
T ss_dssp             SEEEEEEECSSCTTSEEEEEEECCCTTCEE
T ss_pred             HEEEeCCCCcccccccccceEEEEeCCccc
Confidence            999987663211     2488999998864


No 256
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.35  E-value=4.7e-12  Score=129.99  Aligned_cols=138  Identities=20%  Similarity=0.195  Sum_probs=110.3

Q ss_pred             CeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCCCCCCChHHHHHHHHcCCCCCccEEEEEeeeC
Q 005221          140 MYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNTLGGSHGVPRVHFKGRQG  219 (708)
Q Consensus       140 ~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~~~~~~~~Ei~il~~L~h~~~v~~~~~~~~~~  219 (708)
                      .|.+...+|.|+++.||++..            .+..++||+...........+.+|+.+|+.|.+...|+.+..++...
T Consensus        15 ~~~~~~~~~g~s~~~v~~~~~------------~~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~   82 (263)
T 3tm0_A           15 KYRCVKDTEGMSPAKVYKLVG------------ENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHD   82 (263)
T ss_dssp             TSEEEECCSCCSSSEEEEEEC------------SSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEET
T ss_pred             cceeEeeccCCCCCeEEEEEC------------CCCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecC
Confidence            499999999999999999874            35789999987643233457899999999997655688888888888


Q ss_pred             CEEEEEEecC-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHh---------------------------------
Q 005221          220 DYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHS---------------------------------  265 (708)
Q Consensus       220 ~~~~lvme~~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~---------------------------------  265 (708)
                      +..|+|||++ |.+|.+.+.      +......++.++..+|..||+                                 
T Consensus        83 ~~~~lv~e~i~G~~l~~~~~------~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (263)
T 3tm0_A           83 GWSNLLMSEADGVLCSEEYE------DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCE  156 (263)
T ss_dssp             TEEEEEEECCSSEEHHHHCC------TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGG
T ss_pred             CceEEEEEecCCeehhhccC------CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccc
Confidence            8999999999 778876632      112345788999999999998                                 


Q ss_pred             --------------------------CCceecCCCCCcEEeCCCCCCCCCcEEEeccCccc
Q 005221          266 --------------------------KGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLAT  300 (708)
Q Consensus       266 --------------------------~gIvHrDIKP~NILl~~~g~~~~~~vkL~DFGla~  300 (708)
                                                ..++|+|++|.|||++..+     .+.|+||+.+.
T Consensus       157 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~-----~~~lIDwe~a~  212 (263)
T 3tm0_A          157 NWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGK-----VSGFIDLGRSG  212 (263)
T ss_dssp             GGSTTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTE-----EEEECCCTTCE
T ss_pred             cccccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCc-----EEEEEEchhcc
Confidence                                      4589999999999997533     46799999885


No 257
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.19  E-value=4.7e-11  Score=121.61  Aligned_cols=134  Identities=13%  Similarity=0.015  Sum_probs=98.9

Q ss_pred             CCeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCCCCCCChHHHHHHHHcCCCCC-ccEEEEEee
Q 005221          139 PMYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNTLGGSHG-VPRVHFKGR  217 (708)
Q Consensus       139 ~~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~~~~~~~~Ei~il~~L~h~~~-v~~~~~~~~  217 (708)
                      +.|.+....+.|..+.||++.. .          ++..+++|+....   ....+.+|+.+++.|.+.++ |+.+.....
T Consensus        20 ~~~~~~~~~~gg~~~~v~~~~~-~----------~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~   85 (264)
T 1nd4_A           20 FGYDWAQQTIGCSDAAVFRLSA-Q----------GRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVT   85 (264)
T ss_dssp             TTCEEEECSCTTSSCEEEEEEC-T----------TSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEE
T ss_pred             CCCceEecccCCCCceEEEEec-C----------CCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEecc
Confidence            3477655445666799999864 2          3667999997653   23567899999999987655 777777777


Q ss_pred             eCCEEEEEEecC-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC-----------------------------
Q 005221          218 QGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKG-----------------------------  267 (708)
Q Consensus       218 ~~~~~~lvme~~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~g-----------------------------  267 (708)
                      .++..++|||++ |.+| + +..    .+   ...++.+++..|..||+..                             
T Consensus        86 ~~~~~~~v~e~i~G~~l-~-~~~----~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (264)
T 1nd4_A           86 EAGRDWLLLGEVPGQDL-L-SSH----LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQD  156 (264)
T ss_dssp             CSSCEEEEEECCSSEET-T-TSC----CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTT
T ss_pred             CCCCCEEEEEecCCccc-C-cCc----CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccch
Confidence            777899999999 6666 3 221    22   2356778888888888653                             


Q ss_pred             -----------------------------ceecCCCCCcEEeCCCCCCCCCcEEEeccCccc
Q 005221          268 -----------------------------YVHGDVKPENFLLGPPGTPDEKKLFLVDLGLAT  300 (708)
Q Consensus       268 -----------------------------IvHrDIKP~NILl~~~g~~~~~~vkL~DFGla~  300 (708)
                                                   ++|+|++|.|||++.++     .+.|+|||.+.
T Consensus       157 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~-----~~~liD~~~a~  213 (264)
T 1nd4_A          157 DLDEEHQGLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGR-----FSGFIDCGRLG  213 (264)
T ss_dssp             SCCGGGTTCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTE-----EEEECCCTTCE
T ss_pred             hhhhhccCccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCc-----EEEEEcchhcc
Confidence                                         99999999999997543     46799999985


No 258
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=99.05  E-value=5.2e-10  Score=120.39  Aligned_cols=141  Identities=20%  Similarity=0.272  Sum_probs=102.5

Q ss_pred             EEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEee--cCC-CCCCCCChHHHHHHHHcCCCCC-ccEEEEEeee
Q 005221          143 LERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEH--RSS-KGCNYGPPYEWQVYNTLGGSHG-VPRVHFKGRQ  218 (708)
Q Consensus       143 i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~--~~~-~~~~~~~~~Ei~il~~L~h~~~-v~~~~~~~~~  218 (708)
                      .++.|+.|.++.||++..            .+..+++|+..  ... ......+.+|+.+|+.|.+..+ |+.+.....+
T Consensus        42 ~~~~l~~G~sn~~y~v~~------------~~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~  109 (359)
T 3dxp_A           42 SVEQFKGGQSNPTFKLVT------------PGQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCED  109 (359)
T ss_dssp             EEEECCC-CCSCEEEEEC------------SSCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECC
T ss_pred             eEEEcCCcccceEEEEEE------------CCceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCC
Confidence            467899999999999875            23578888876  322 1224578899999999986443 6666666555


Q ss_pred             C---CEEEEEEecC-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHh-----------------------------
Q 005221          219 G---DYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHS-----------------------------  265 (708)
Q Consensus       219 ~---~~~~lvme~~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~-----------------------------  265 (708)
                      .   +..++|||++ |..|.+..   -..++......++.+++..|..||+                             
T Consensus       110 ~~~~g~~~~vme~v~G~~l~~~~---~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (359)
T 3dxp_A          110 ESVIGRAFYIMEFVSGRVLWDQS---LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQY  186 (359)
T ss_dssp             TTTTSSCEEEEECCCCBCCCCTT---CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHH
T ss_pred             CCccCCeEEEEEecCCeecCCCc---cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHH
Confidence            5   3478999999 55554311   1247888899999999999999997                             


Q ss_pred             -----------------------------CCceecCCCCCcEEeCCCCCCCCCcEEEeccCcccc
Q 005221          266 -----------------------------KGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATK  301 (708)
Q Consensus       266 -----------------------------~gIvHrDIKP~NILl~~~g~~~~~~vkL~DFGla~~  301 (708)
                                                   .++||+|++|.|||++.++.   ..+.|+||+.+..
T Consensus       187 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~---~v~~viDwe~a~~  248 (359)
T 3dxp_A          187 KLSETESIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEP---RVLAVLDWELSTL  248 (359)
T ss_dssp             HHHCCSCCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSS---CEEEECCCTTCEE
T ss_pred             HhcCCcCChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCC---cEEEEECcccccc
Confidence                                         36999999999999986542   2468999999863


No 259
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.87  E-value=3.1e-10  Score=119.27  Aligned_cols=191  Identities=14%  Similarity=0.136  Sum_probs=120.3

Q ss_pred             EeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCCCCCCChHHHHHHHHcCCCC--CccEEEEEeeeCC--
Q 005221          145 RKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNTLGGSH--GVPRVHFKGRQGD--  220 (708)
Q Consensus       145 ~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~~~~~~~~Ei~il~~L~h~~--~v~~~~~~~~~~~--  220 (708)
                      +.|+.|.+..||++.               ..+++|+....  .....+.+|..+|+.|.+..  .++.+...+..++  
T Consensus        26 ~~~~~G~~n~v~~v~---------------~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~   88 (304)
T 3sg8_A           26 EISGEGNDCIAYEIN---------------RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETY   88 (304)
T ss_dssp             CEEEECSSEEEEEST---------------TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSC
T ss_pred             EecCCCCcceEEEEC---------------CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCC
Confidence            458999999999752               35888986533  11335788999999985432  2555555544333  


Q ss_pred             -EEEEEEecC-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHh---------------------------------
Q 005221          221 -YYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHS---------------------------------  265 (708)
Q Consensus       221 -~~~lvme~~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~---------------------------------  265 (708)
                       ..|+||+++ |.+|.+...   ..++......++.|++..|..||+                                 
T Consensus        89 ~~~~~vm~~i~G~~l~~~~~---~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (304)
T 3sg8_A           89 QMSFAGFTKIKGVPLTPLLL---NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSREL  165 (304)
T ss_dssp             SCSCEEEECCCCEECCHHHH---HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTS
T ss_pred             CcceEEEcccCCeECCcccc---ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccC
Confidence             457889999 666664332   247888888999999999999996                                 


Q ss_pred             -------------------------CCceecCCCCCcEEeCCCCCCCCCcEEEeccCccccccCCCCCccccccC---C-
Q 005221          266 -------------------------KGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYDQ---R-  316 (708)
Q Consensus       266 -------------------------~gIvHrDIKP~NILl~~~g~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~---~-  316 (708)
                                               ..++|+|++|.|||++.+.   ...+.|+||+.+..-... .........   . 
T Consensus       166 ~~~~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~---~~~~~~iD~~~~~~~~~~-~Dl~~~~~~~~~~~  241 (304)
T 3sg8_A          166 KGPQMKKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEK---NTICGIIDFGDAAISDPD-NDFISLMEDDEEYG  241 (304)
T ss_dssp             CHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTT---TEEEEECCCTTCEEECTT-HHHHTTCCTTTSCC
T ss_pred             CcccHHHHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCC---CCEEEEEeCCCCccCChH-HHHHHHHhhccccC
Confidence                                     1379999999999998641   125789999998753221 000000000   0 


Q ss_pred             ---Cceeeccccccc-hhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCC
Q 005221          317 ---PDVFRGTVRYAS-VHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQ  361 (708)
Q Consensus       317 ---~~~~~GT~~Y~A-PE~~~~~~~s~~~DIwSlGviL~eLltG~~Pf~  361 (708)
                         ...+....+... |+.....  ....+.|+++.+++.+.+|.++|-
T Consensus       242 ~~~~~~~l~~Y~~~~~~~~~~r~--~~~~~~~~l~~~~~~~~~g~~~~~  288 (304)
T 3sg8_A          242 MEFVSKILNHYKHKDIPTVLEKY--RMKEKYWSFEKIIYGKEYGYMDWY  288 (304)
T ss_dssp             HHHHHHHHHHHTCSCHHHHHHHH--HHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred             HHHHHHHHHHcCCCCcHHHHHHH--HHHHHHHHHHHHHHHHHcCCHHHH
Confidence               000001111111 2221111  223589999999999999988764


No 260
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.43  E-value=3.4e-07  Score=96.78  Aligned_cols=132  Identities=20%  Similarity=0.275  Sum_probs=96.8

Q ss_pred             eEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCCCCCCChHHHHHHHHcCC---CCCccEEEEEee
Q 005221          141 YRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNTLGG---SHGVPRVHFKGR  217 (708)
Q Consensus       141 Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~~~~~~~~Ei~il~~L~h---~~~v~~~~~~~~  217 (708)
                      ...++.|+.|....||+.   .            ..+++|+......  ...+.+|..+|+.|.+   .-.|+.+...  
T Consensus        39 i~~v~~l~~G~~n~vy~v---g------------~~~vlR~~~~~~~--~~~~~~E~~~L~~L~~~~~~~~vP~v~~~--   99 (320)
T 3r70_A           39 INELRYLSSGDDSDTFLC---N------------EQYVVKVPKRDSV--RISQKRELELYRFLENCKLSYQIPAVVYQ--   99 (320)
T ss_dssp             CSCEEEEEECSSEEEEEE---T------------TTEEEEEESSHHH--HHHHHHHHHHHHHHTTSCCSSBCCCEEEE--
T ss_pred             eEEEEeCCCCCCceEEEE---C------------CEEEEEeCCcHHH--HHHHHHHHHHHHHHHhcCCCCCcceEEec--
Confidence            445688999999999987   2            3488887643211  1236889999999976   2235666555  


Q ss_pred             eCCEEEEEEecC-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC-----------------------------
Q 005221          218 QGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKG-----------------------------  267 (708)
Q Consensus       218 ~~~~~~lvme~~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~g-----------------------------  267 (708)
                        +..++||+++ |.+|.+...   ..++......++.++...|..||+..                             
T Consensus       100 --~~~~lvme~i~G~~l~~~~~---~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  174 (320)
T 3r70_A          100 --SDRFNIMKYIKGERITYEQY---HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISI  174 (320)
T ss_dssp             --CSSCEEEECCCCBCCCHHHH---TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHH
T ss_pred             --CCcEEEEeecCCcccccccc---ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHH
Confidence              3467999999 767754332   24777888888889999998888532                             


Q ss_pred             ----------------------------------ceecCCCCCcEEeCCCCCCCCCcEEEeccCcccc
Q 005221          268 ----------------------------------YVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATK  301 (708)
Q Consensus       268 ----------------------------------IvHrDIKP~NILl~~~g~~~~~~vkL~DFGla~~  301 (708)
                                                        ++|+|++|.|||++.++     .+.|+||+.+..
T Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~-----~~~~iD~~~~~~  237 (320)
T 3r70_A          175 LEKEQLLTDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNR-----LFGVIDFGDFNV  237 (320)
T ss_dssp             HHHTTCCCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTE-----EEEECCCTTCEE
T ss_pred             HhhcccccccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCc-----eEEEECCccccc
Confidence                                              39999999999998643     469999999864


No 261
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.32  E-value=1.9e-06  Score=90.53  Aligned_cols=137  Identities=16%  Similarity=0.207  Sum_probs=91.8

Q ss_pred             EEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCCCCCCChHHHHHHHHcCCCC--CccEEEEEee-eCC
Q 005221          144 ERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNTLGGSH--GVPRVHFKGR-QGD  220 (708)
Q Consensus       144 ~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~~~~~~~~Ei~il~~L~h~~--~v~~~~~~~~-~~~  220 (708)
                      ++.++.|....||+.   .            ..+++|+-...  .....+.+|..+|+.|.+..  .|+.+..++. ..+
T Consensus        24 v~~l~~G~~n~v~~v---g------------~~~VlR~~~~~--~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g   86 (306)
T 3tdw_A           24 VESLGEGFRNYAILV---N------------GDWVFRFPKSQ--QGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDG   86 (306)
T ss_dssp             EEEEEECSSEEEEEE---T------------TTEEEEEESSH--HHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTS
T ss_pred             eeecCCCcceeEEEE---C------------CEEEEEecCCc--hHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCC
Confidence            456888999999987   2            34788874321  11235778999999998642  3566665553 445


Q ss_pred             EEEEEEecC-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC---------------------------------
Q 005221          221 YYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSK---------------------------------  266 (708)
Q Consensus       221 ~~~lvme~~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~---------------------------------  266 (708)
                      ..+++|+++ |.+|.+...   ..++......++.++...|..||+.                                 
T Consensus        87 ~~~~v~e~i~G~~l~~~~~---~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~  163 (306)
T 3tdw_A           87 NPFVGYRKVQGQILGEDGM---AVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPL  163 (306)
T ss_dssp             CEEEEEECCCSEECHHHHH---TTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGG
T ss_pred             ceEEEEeccCCeECchhhh---hhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccc
Confidence            678999999 666655321   1355666666666666666666642                                 


Q ss_pred             ---------------------------CceecCCCCCcEEeCCCCCCCCCcEEEeccCcccc
Q 005221          267 ---------------------------GYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATK  301 (708)
Q Consensus       267 ---------------------------gIvHrDIKP~NILl~~~g~~~~~~vkL~DFGla~~  301 (708)
                                                 .++|+|++|.|||++.++. +...+.|+||+.+..
T Consensus       164 l~~~~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~-~~~~~~~iD~~~a~~  224 (306)
T 3tdw_A          164 LDESLRDYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSR-QTPLTGIIDFGDAAI  224 (306)
T ss_dssp             SCHHHHHHHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCS-SCCEEEECCCTTCEE
T ss_pred             cchhhHHHHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCC-CCceEEEEehhhcCC
Confidence                                       3599999999999986210 112458999999864


No 262
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.26  E-value=2.2e-06  Score=92.36  Aligned_cols=74  Identities=14%  Similarity=0.070  Sum_probs=54.7

Q ss_pred             eEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCCCCCCChHHHHHHHHcCCCCC-ccEEEEEeeeC
Q 005221          141 YRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNTLGGSHG-VPRVHFKGRQG  219 (708)
Q Consensus       141 Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~~~~~~~~Ei~il~~L~h~~~-v~~~~~~~~~~  219 (708)
                      ...++.|+.|....||+...            .+..+++|+....     ..+.+|..+|+.|....+ |+.+...+...
T Consensus        43 ~~~i~~l~gG~~n~~y~v~~------------~g~~~vlK~~~~~-----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~  105 (362)
T 3ovc_A           43 VSDLMQLSEGEESRAFSFDV------------GGRGYVLRVNSCA-----DGFYKDRYVYRHFASAALPIPEVLDIGEFS  105 (362)
T ss_dssp             CEEEEEEEECSSEEEEEEEE------------TTEEEEEEEESCC-----HHHHHHHHHHHHHCCSSSCCCCEEEEEESS
T ss_pred             CceEEECCCCCcceEEEEEE------------CCcEEEEEeCCch-----hhHHHHHHHHHHHHhcCCCCceEEEeccCC
Confidence            45578899999999998874            4678999987432     147889999999986543 56666555443


Q ss_pred             -CEEEEEEecCCC
Q 005221          220 -DYYVMVMDMLGP  231 (708)
Q Consensus       220 -~~~~lvme~~gg  231 (708)
                       ...++||+++.|
T Consensus       106 ~g~~~lv~e~l~G  118 (362)
T 3ovc_A          106 ESLTYCISRRAQG  118 (362)
T ss_dssp             SSCEEEEEECCCS
T ss_pred             CCCeEEEEEecCC
Confidence             678899999943


No 263
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=98.24  E-value=2.1e-06  Score=93.37  Aligned_cols=76  Identities=21%  Similarity=0.195  Sum_probs=50.4

Q ss_pred             EEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCC-------CCCCCChHHHHHHHHcCC--CCCccEEEE
Q 005221          144 ERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSK-------GCNYGPPYEWQVYNTLGG--SHGVPRVHF  214 (708)
Q Consensus       144 ~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~-------~~~~~~~~Ei~il~~L~h--~~~v~~~~~  214 (708)
                      .+.||.|.++.||++....          .+..|+||.......       .......+|.++|+.+..  +..++.++.
T Consensus        35 ~~~lg~G~~n~vyrv~~~~----------~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~  104 (397)
T 2olc_A           35 CQEIGDGNLNYVFHIYDQE----------HDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFY  104 (397)
T ss_dssp             EEECCSSSSEEEEEEEC--------------CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEE
T ss_pred             EEECCCCceEEEEEEEECC----------CCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEE
Confidence            5789999999999997644          467899998653211       112335789999998864  345666665


Q ss_pred             EeeeCCEEEEEEecCCC
Q 005221          215 KGRQGDYYVMVMDMLGP  231 (708)
Q Consensus       215 ~~~~~~~~~lvme~~gg  231 (708)
                      +.  .+..+||||++.+
T Consensus       105 ~d--~~~~~lvmE~l~g  119 (397)
T 2olc_A          105 SD--TEMAVTVMEDLSH  119 (397)
T ss_dssp             EE--TTTTEEEECCCTT
T ss_pred             Ec--CCccEEEEEeCCC
Confidence            53  3345799999944


No 264
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.23  E-value=5e-06  Score=85.02  Aligned_cols=132  Identities=20%  Similarity=0.180  Sum_probs=93.6

Q ss_pred             eEeeeCce-EEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCCCCCCChHHHHHHHHcCCCCCccEEEEEeeeCCEEEE
Q 005221          146 KLGKGGFG-QVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNTLGGSHGVPRVHFKGRQGDYYVM  224 (708)
Q Consensus       146 ~LG~G~fg-~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~~~~~~~~Ei~il~~L~h~~~v~~~~~~~~~~~~~~l  224 (708)
                      .+..|..| .||+.....          .+..+++|+-....   ...+.+|..+|+.|...--|+.+..++.+++..++
T Consensus        31 ~~~~G~S~~~v~rl~~~~----------~~~~~~lk~~~~~~---~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~l   97 (272)
T 4gkh_A           31 RDNVGQSGATIYRLYGKP----------NAPELFLKHGKGSV---ANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWL   97 (272)
T ss_dssp             EEECSSSSCEEEEEECCT----------TCCCEEEEEEETHH---HHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEE
T ss_pred             EccCCCcCCeEEEEEecC----------CCeEEEEEECCCCC---HhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEE
Confidence            44555555 699877654          56779999865432   22467899999999764457888888888899999


Q ss_pred             EEecC-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC-------------------------------------
Q 005221          225 VMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSK-------------------------------------  266 (708)
Q Consensus       225 vme~~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~-------------------------------------  266 (708)
                      ||+++ |.++.+.+...     ......+..++...|..||+.                                     
T Consensus        98 vme~l~G~~~~~~~~~~-----~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (272)
T 4gkh_A           98 LTTAIPGKTAFQVLEEY-----PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERN  172 (272)
T ss_dssp             EEECCCSEEHHHHHHHC-----GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGT
T ss_pred             EEEeeCCccccccccCC-----HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhcccccc
Confidence            99999 66776655431     122344556666666666642                                     


Q ss_pred             ---------------------CceecCCCCCcEEeCCCCCCCCCcEEEeccCccc
Q 005221          267 ---------------------GYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLAT  300 (708)
Q Consensus       267 ---------------------gIvHrDIKP~NILl~~~g~~~~~~vkL~DFGla~  300 (708)
                                           .++|+|+.|.|||++..+     .+-|+||+.+.
T Consensus       173 ~~~~~~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~-----~~~viDwe~a~  222 (272)
T 4gkh_A          173 GWPVEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGK-----LIGCIDVGRVG  222 (272)
T ss_dssp             TCCHHHHHHHHHTTCCCCCCEEEECSCCCTTSEEEETTE-----EEEECCCTTCE
T ss_pred             chHHHHHHHHHHhcccccCCcEEEcCCCCCCeEEEECCe-----EEEEEECcccc
Confidence                                 159999999999997544     46799999985


No 265
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.21  E-value=8.5e-06  Score=84.88  Aligned_cols=77  Identities=14%  Similarity=-0.012  Sum_probs=56.8

Q ss_pred             eEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCCCCCCChHHHHHHHHcCCCC--CccEEEEEeee
Q 005221          141 YRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNTLGGSH--GVPRVHFKGRQ  218 (708)
Q Consensus       141 Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~~~~~~~~Ei~il~~L~h~~--~v~~~~~~~~~  218 (708)
                      ..-.+.||.|.++.||++...           +|..+++|+...........+..|+.+|+.|.+..  .|+.+...+  
T Consensus        17 ~~~~~~l~gG~~n~vy~v~~~-----------dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~--   83 (288)
T 3d1u_A           17 VAAVAERGHSHRWHLYRVELA-----------DGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD--   83 (288)
T ss_dssp             EEEEEEEEEETTEEEEEEEET-----------TSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE--
T ss_pred             ccceeeeCCcchhheEEEEeC-----------CCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec--
Confidence            345788999999999999763           47789999865443323456789999999998753  466666553  


Q ss_pred             CCEEEEEEecC-CCC
Q 005221          219 GDYYVMVMDML-GPS  232 (708)
Q Consensus       219 ~~~~~lvme~~-ggs  232 (708)
                        ..++|||++ |++
T Consensus        84 --~~~lvme~l~g~~   96 (288)
T 3d1u_A           84 --DRTLAMEWVDERP   96 (288)
T ss_dssp             --TTEEEEECCCCCC
T ss_pred             --CcEEEEEecccCC
Confidence              258899999 555


No 266
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.15  E-value=3e-06  Score=90.58  Aligned_cols=88  Identities=15%  Similarity=0.154  Sum_probs=55.1

Q ss_pred             EEEEeE-eeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCC---CCCCCCChHHHHHHHHcCCC-C-CccEEEEE
Q 005221          142 RLERKL-GKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSS---KGCNYGPPYEWQVYNTLGGS-H-GVPRVHFK  215 (708)
Q Consensus       142 ~i~~~L-G~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~---~~~~~~~~~Ei~il~~L~h~-~-~v~~~~~~  215 (708)
                      ...+.| +.|....+|+........    .+..+..+++|+.....   ......+.+|+.+|+.|... . .|+.+...
T Consensus        23 ~~~~~l~~~G~~n~~y~v~~~~~~~----~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~   98 (357)
T 3ats_A           23 TVESGVDSTGMSSETIILTARWQQD----GRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWI   98 (357)
T ss_dssp             EEEEEECTTSSEEEEEEEEEEEEET----TEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEE
T ss_pred             EEEEECCCCCccceEEEEEEecccC----CCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEE
Confidence            445778 888899999887531000    00015678899865432   11235678999999999653 2 36666665


Q ss_pred             eeeC---CEEEEEEecC-CCCH
Q 005221          216 GRQG---DYYVMVMDML-GPSL  233 (708)
Q Consensus       216 ~~~~---~~~~lvme~~-ggsL  233 (708)
                      ..++   ...++|||++ |..|
T Consensus        99 ~~~~~~~g~~~~v~e~l~G~~l  120 (357)
T 3ats_A           99 ETTGDVLGTPFFLMDYVEGVVP  120 (357)
T ss_dssp             ECSSTTTSSCEEEEECCCCBCC
T ss_pred             ccCCCccCCceEEEEecCCCCh
Confidence            5444   3467899999 5443


No 267
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.87  E-value=2e-05  Score=83.16  Aligned_cols=72  Identities=17%  Similarity=0.181  Sum_probs=41.6

Q ss_pred             EEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCCCCCCChHHHHHHHHcCCCC-CccEEEE------Ee
Q 005221          144 ERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNTLGGSH-GVPRVHF------KG  216 (708)
Q Consensus       144 ~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~~~~~~~~Ei~il~~L~h~~-~v~~~~~------~~  216 (708)
                      ++.|+.|..+.||++...            +..+++|+....    ......|..+++.|.... .|+.+..      +.
T Consensus        37 ~~~l~gG~~n~~~~v~~~------------~~~~vlk~~~~~----~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~  100 (346)
T 2q83_A           37 IDVIQGNQMALVWKVHTD------------SGAVCLKRIHRP----EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYS  100 (346)
T ss_dssp             EEECC----CEEEEEEET------------TEEEEEEEECSC----HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCE
T ss_pred             eeeccccccCcEEEEEeC------------CCCEEEEecCCC----HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEE
Confidence            356666778999998752            235889988752    123456777777775321 1233322      12


Q ss_pred             eeCCEEEEEEecCCC
Q 005221          217 RQGDYYVMVMDMLGP  231 (708)
Q Consensus       217 ~~~~~~~lvme~~gg  231 (708)
                      ..++..+++|+++.|
T Consensus       101 ~~~~~~~~l~~~i~G  115 (346)
T 2q83_A          101 KHGSFLFVVYDWIEG  115 (346)
T ss_dssp             EETTEEEEEEECCCC
T ss_pred             EECCEEEEEEEeecC
Confidence            346778999999943


No 268
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.57  E-value=0.00081  Score=69.38  Aligned_cols=75  Identities=15%  Similarity=0.007  Sum_probs=53.8

Q ss_pred             CeEEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCCCCCCChHHHHHHHHcCCCC--CccEEEEEee
Q 005221          140 MYRLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNTLGGSH--GVPRVHFKGR  217 (708)
Q Consensus       140 ~Y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~~~~~~~~Ei~il~~L~h~~--~v~~~~~~~~  217 (708)
                      ...-++.+|.|..+.||+....           +|+.|.+|+-..........+..|...|+.|....  -|+.+...  
T Consensus        16 ~v~~v~~~g~G~~~~vyrv~l~-----------DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~--   82 (288)
T 3f7w_A           16 EVAAVAERGHSHRWHLYRVELA-----------DGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGW--   82 (288)
T ss_dssp             CEEEEEEEEEETTEEEEEEEET-----------TSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEE--
T ss_pred             CeEEEEecCCCCCeEEEEEEEC-----------CCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEec--
Confidence            4566799999999999999763           47889999876554333445678999999996543  34555444  


Q ss_pred             eCCEEEEEEecC
Q 005221          218 QGDYYVMVMDML  229 (708)
Q Consensus       218 ~~~~~~lvme~~  229 (708)
                      ...  ++|||++
T Consensus        83 ~~~--~lv~e~l   92 (288)
T 3f7w_A           83 DDR--TLAMEWV   92 (288)
T ss_dssp             ETT--EEEEECC
T ss_pred             cCc--eEEEEee
Confidence            333  5788988


No 269
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=97.55  E-value=0.00035  Score=73.71  Aligned_cols=122  Identities=14%  Similarity=0.118  Sum_probs=67.8

Q ss_pred             ccEEEEEEeecCCCCCCCCChHHHHHHHHcCCCCC-ccEEEEEeeeCCEEEEEEecCC-CCHHHHHhcc-----------
Q 005221          174 AVEVALKFEHRSSKGCNYGPPYEWQVYNTLGGSHG-VPRVHFKGRQGDYYVMVMDMLG-PSLWDVWNNN-----------  240 (708)
Q Consensus       174 ~~~VAlK~~~~~~~~~~~~~~~Ei~il~~L~h~~~-v~~~~~~~~~~~~~~lvme~~g-gsL~~~l~~~-----------  240 (708)
                      +..+++|......   ...+..|+.+++.|....+ |+.+........  +++||.++ .++.+.+...           
T Consensus        43 ~~~~vlk~~~~~~---~~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~g--~ll~e~l~~~~l~~~l~~~~~~~~~~~~~~  117 (333)
T 3csv_A           43 GAKAVLMDWSPEE---GGDTQPFVDLAQYLRNLDISAPEIYAEEHARG--LLLIEDLGDALFTEVINNDPAQEMPLYRAA  117 (333)
T ss_dssp             CCEEEEEECCTTT---TCCSHHHHHHHHHHHHTTCBCCCEEEEETTTT--EEEECCCCSCBHHHHHHHCGGGHHHHHHHH
T ss_pred             CCeEEEEECCCCC---CccccHHHHHHHHHHhCCCCCCceeeecCCCC--EEEEeeCCCcchHHHhcCCCccHHHHHHHH
Confidence            4567777544321   1467789999999875443 566665533333  67899985 4554333210           


Q ss_pred             ----------C----CCCCHHHHHH--------H------------HHHHHHHHHHH------HhCCceecCCCCCcEEe
Q 005221          241 ----------S----HTMSIEMVAC--------I------------AIEAISILEKM------HSKGYVHGDVKPENFLL  280 (708)
Q Consensus       241 ----------~----~~l~~~~~~~--------i------------~~qil~aL~yL------H~~gIvHrDIKP~NILl  280 (708)
                                .    ..++......        +            ...+...++.|      +...+||+|+.+.|||+
T Consensus       118 ~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~~~~~~~~lvHgD~~~~Nil~  197 (333)
T 3csv_A          118 VDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSAQLEGDMVFVHRDFHAQNLLW  197 (333)
T ss_dssp             HHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHHHHCCSCCEEECSCCSGGGEEE
T ss_pred             HHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhcccCCCeeEeCCcCcccEEe
Confidence                      0    0122211100        0            00111222233      23479999999999999


Q ss_pred             CCCCCCCCCcEEEeccCcccc
Q 005221          281 GPPGTPDEKKLFLVDLGLATK  301 (708)
Q Consensus       281 ~~~g~~~~~~vkL~DFGla~~  301 (708)
                      +.+.. ....+.|+||+.+..
T Consensus       198 ~~~~~-~~~~~~lIDf~~a~~  217 (333)
T 3csv_A          198 LPERE-GLARVGVIDFQDAKL  217 (333)
T ss_dssp             CTTSC-GGGGEEECCCTTCEE
T ss_pred             ccCcC-CCCCeEEEeCCCcCc
Confidence            76410 113689999999864


No 270
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.52  E-value=0.00011  Score=80.60  Aligned_cols=74  Identities=16%  Similarity=0.214  Sum_probs=45.4

Q ss_pred             EEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCC----C---CCCCChHHHHHHHHcC--CCCCccEEEE
Q 005221          144 ERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSK----G---CNYGPPYEWQVYNTLG--GSHGVPRVHF  214 (708)
Q Consensus       144 ~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~----~---~~~~~~~Ei~il~~L~--h~~~v~~~~~  214 (708)
                      ++.||.|..+.||++..            .+..++||.......    .   .......|.+++..+.  .+..++.+..
T Consensus        39 i~~l~~G~~n~vyrv~~------------~~~~~vvK~~~p~~~~~~~~~~~~~~~~~~E~e~l~~~~~~~~~~vP~v~~  106 (420)
T 2pyw_A           39 IKEVGDGNLNFVFIVVG------------SSGSLVIKQALPYIRCIGESWPMTKERAYFEATTLRKHGNLSPDHVPEVYH  106 (420)
T ss_dssp             EEECCCSSSCEEEEEEC------------SSCEEEEEECCSBCTTTCTTSBCCTTHHHHHHHHHHHHHHHSGGGSCCEEE
T ss_pred             EEEccCCCcEEEEEEEc------------CCceEEEEECchhhcccCcccccchhHHHHHHHHHHHHHhhCCCCCCeEEE
Confidence            57889999999999853            356799994332111    0   0122234555554442  2345666666


Q ss_pred             EeeeCCEEEEEEecC-CC
Q 005221          215 KGRQGDYYVMVMDML-GP  231 (708)
Q Consensus       215 ~~~~~~~~~lvme~~-gg  231 (708)
                      ..  ....++|||++ +|
T Consensus       107 ~~--~~~~~lv~e~l~~g  122 (420)
T 2pyw_A          107 FD--RTMALIGMRYLEPP  122 (420)
T ss_dssp             EE--TTTTEEEECCCCTT
T ss_pred             EC--CCccEEEEeecCCc
Confidence            64  45578999999 76


No 271
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.45  E-value=0.00053  Score=71.29  Aligned_cols=69  Identities=14%  Similarity=0.098  Sum_probs=47.2

Q ss_pred             EEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCCCCCCChHHHHHHHHcCCCCCccEEEEEeeeCCEEE
Q 005221          144 ERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNTLGGSHGVPRVHFKGRQGDYYV  223 (708)
Q Consensus       144 ~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~~~~~~~~Ei~il~~L~h~~~v~~~~~~~~~~~~~~  223 (708)
                      ++.|+.|....+|++   .             .+++|+....... .....+|+.+++.|....+.+.+.....+  .-+
T Consensus        23 i~~l~gG~tN~~~~~---~-------------~~vlR~~~~~~~~-~~~r~~E~~~l~~l~~~g~~P~~~~~~~~--~~~   83 (301)
T 3dxq_A           23 PLERLGGLTNLVFRA---G-------------DLCLRIPGKGTEE-YINRANEAVAAREAAKAGVSPEVLHVDPA--TGV   83 (301)
T ss_dssp             CEEEESCSSEEEEEE---T-------------TEEEEEECC-----CCCHHHHHHHHHHHHHTTSSCCEEEECTT--TCC
T ss_pred             eeEcCCcccccccee---e-------------eEEEECCCCCccc-eeCHHHHHHHHHHHHHcCCCCceEEEECC--CCE
Confidence            588999999999998   2             3788887654221 23457899999998766666666655332  236


Q ss_pred             EEEecC-CC
Q 005221          224 MVMDML-GP  231 (708)
Q Consensus       224 lvme~~-gg  231 (708)
                      ++++++ +|
T Consensus        84 ~v~e~i~~g   92 (301)
T 3dxq_A           84 MVTRYIAGA   92 (301)
T ss_dssp             EEEECCTTC
T ss_pred             EEEeecCCC
Confidence            789998 55


No 272
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.22  E-value=0.00072  Score=71.01  Aligned_cols=75  Identities=19%  Similarity=0.156  Sum_probs=56.6

Q ss_pred             EEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCCCCCCChHHHHHHHHcCCC--CCccEEEEEeeeCC
Q 005221          143 LERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNTLGGS--HGVPRVHFKGRQGD  220 (708)
Q Consensus       143 i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~~~~~~~~Ei~il~~L~h~--~~v~~~~~~~~~~~  220 (708)
                      -.+.|+.|.+..||+...            .+..+++|+.....   ...+..|..+|+.|...  -.|+.+...+...+
T Consensus        40 ~~~~l~gG~~n~~y~v~~------------~~~~~vlK~~~~~~---~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g  104 (312)
T 3jr1_A           40 HKEKLYSGEMNEIWLIND------------EVQTVFVKINERSY---RSMFRAEADQLALLAKTNSINVPLVYGIGNSQG  104 (312)
T ss_dssp             EEEEECCSSSSEEEEEES------------SSCEEEEEEEEGGG---HHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSS
T ss_pred             eeEEeCCccceeeeEEEE------------CCCeEEEEeCCccc---HHHHHHHHHHHHHHHhhCCCCcceEEEEeecCC
Confidence            357899999999999874            35678899876432   33467899999998642  45777777777778


Q ss_pred             EEEEEEecC-CCC
Q 005221          221 YYVMVMDML-GPS  232 (708)
Q Consensus       221 ~~~lvme~~-ggs  232 (708)
                      ..++|||++ |..
T Consensus       105 ~~~lvme~l~G~~  117 (312)
T 3jr1_A          105 HSFLLLEALNKSK  117 (312)
T ss_dssp             EEEEEEECCCCCC
T ss_pred             ceEEEEEeccCCC
Confidence            899999999 443


No 273
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.15  E-value=0.0017  Score=67.78  Aligned_cols=140  Identities=12%  Similarity=0.103  Sum_probs=78.5

Q ss_pred             EEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCCCCCCChHHHHHHHHcCCCCC-ccEEEEE-----
Q 005221          142 RLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNTLGGSHG-VPRVHFK-----  215 (708)
Q Consensus       142 ~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~~~~~~~~Ei~il~~L~h~~~-v~~~~~~-----  215 (708)
                      .-++.|+.|....||+.....            ..+++|+....  .....+..|+.++..|....+ |+.+...     
T Consensus        25 ~~~~~i~~G~~n~~~~v~~~~------------g~~vlk~~~~~--~~~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~   90 (322)
T 2ppq_A           25 TSYKGIAEGVENSNFLLHTTK------------DPLILTLYEKR--VEKNDLPFFLGLMQHLAAKGLSCPLPLPRKDGEL   90 (322)
T ss_dssp             EEEEEECC---EEEEEEEESS------------CCEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCS
T ss_pred             eEeeccCCCcccceEEEEeCC------------ccEEEEEeCCC--CCHHHHHHHHHHHHHHHHCCCCCCcccCCCCCCE
Confidence            445778889889999987532            35889988753  123456789999998864332 3333211     


Q ss_pred             -eeeCCEEEEEEecCCC-CHH----H----------HHhcc----CCC----CCHHHHHH---------------HHHHH
Q 005221          216 -GRQGDYYVMVMDMLGP-SLW----D----------VWNNN----SHT----MSIEMVAC---------------IAIEA  256 (708)
Q Consensus       216 -~~~~~~~~lvme~~gg-sL~----~----------~l~~~----~~~----l~~~~~~~---------------i~~qi  256 (708)
                       ...++..+++|+++.| .+.    .          .+...    ...    .....-..               +...+
T Consensus        91 ~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~l  170 (322)
T 2ppq_A           91 LGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEI  170 (322)
T ss_dssp             CEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHHHH
T ss_pred             EEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhhhhHHHH
Confidence             1234667899999943 321    0          01111    000    11000000               00113


Q ss_pred             HHHHHHHHh-------CCceecCCCCCcEEeCCCCCCCCCcEEEeccCccc
Q 005221          257 ISILEKMHS-------KGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLAT  300 (708)
Q Consensus       257 l~aL~yLH~-------~gIvHrDIKP~NILl~~~g~~~~~~vkL~DFGla~  300 (708)
                      ...++.|++       .++||+|+.+.|||++.++     .+.|+||+.+.
T Consensus       171 ~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~-----~~~lIDf~~a~  216 (322)
T 2ppq_A          171 RPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDE-----LSGLIDFYFAC  216 (322)
T ss_dssp             HHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTE-----EEEECCCTTCE
T ss_pred             HHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCc-----eEEEecchhcc
Confidence            344555542       4799999999999997543     35799999885


No 274
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.98  E-value=0.0012  Score=70.61  Aligned_cols=81  Identities=12%  Similarity=0.079  Sum_probs=45.9

Q ss_pred             EEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCCCCCCChHHHHHHHHcCCCCCccEEEEEeeeCCEEE
Q 005221          144 ERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNTLGGSHGVPRVHFKGRQGDYYV  223 (708)
Q Consensus       144 ~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~~~~~~~~Ei~il~~L~h~~~v~~~~~~~~~~~~~~  223 (708)
                      ++.|+.|....||++.......  ......+..+++|+....... .....+|..+++.|....+++.+....  .+  +
T Consensus        38 ~~~l~~G~~N~~y~v~~~~~~~--~~~~~~~~~~vlRi~~~~~~~-~~~~~~E~~~l~~L~~~g~~P~~~~~~--~~--~  110 (369)
T 3c5i_A           38 VKQILSGLTNQLFEVGLKEETA--NNYNSIRTRVLFRIYGKHVDE-LYNTISEFEVYKTMSKYKIAPQLLNTF--NG--G  110 (369)
T ss_dssp             EEEC----CCEEEEEEECHHHH--TTCTTSCCEEEEEECCTTGGG-TSCHHHHHHHHHHHHHTTSSCCEEEEE--TT--E
T ss_pred             EEEeCCcccceEEEEEeCCCCc--ccccCCCceEEEEecCCCccc-eecHHHHHHHHHHHHhcCCCCceEEec--CC--c
Confidence            4678888888999987532000  000001257889987543221 223578999999997665566665443  23  5


Q ss_pred             EEEecCCC
Q 005221          224 MVMDMLGP  231 (708)
Q Consensus       224 lvme~~gg  231 (708)
                      +||+++.|
T Consensus       111 ~v~e~i~G  118 (369)
T 3c5i_A          111 RIEEWLYG  118 (369)
T ss_dssp             EEEECCCS
T ss_pred             EEEEEecC
Confidence            78999944


No 275
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=96.91  E-value=0.012  Score=57.82  Aligned_cols=123  Identities=13%  Similarity=0.075  Sum_probs=78.4

Q ss_pred             CCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH-hCCceecCCCCCcEEeCCCCCCCCCcEEEeccCccccccCCCCCc
Q 005221          231 PSLWDVWNNNSHTMSIEMVACIAIEAISILEKMH-SKGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGM  309 (708)
Q Consensus       231 gsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH-~~gIvHrDIKP~NILl~~~g~~~~~~vkL~DFGla~~~~~~~~~~  309 (708)
                      -||.++|...+.+|+|++++.++.|.+..|.-+- .+.-..+=+-|..|+|..+|+     |.+.+ +.+.         
T Consensus        33 vSL~eIL~~~~~PlsEEqaWALc~Qc~~~L~~~~~~~~~~~~i~~~~~i~l~~dG~-----V~f~~-~~s~---------   97 (229)
T 2yle_A           33 LSLEEILRLYNQPINEEQAWAVCYQCCGSLRAAARRRQPRHRVRSAAQIRVWRDGA-----VTLAP-AADD---------   97 (229)
T ss_dssp             EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCSGGGEEEETTSC-----EEECC-C------------
T ss_pred             ccHHHHHHHcCCCcCHHHHHHHHHHHHHHHHhhhhcccCCceecCCcceEEecCCc-----eeccc-cccc---------
Confidence            3799999999999999999999999999988762 122123334468999988885     55543 1111         


Q ss_pred             cccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhhccCCCCCCccCCCC
Q 005221          310 HVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCKKKMATSPDGLCCFCP  389 (708)
Q Consensus       310 ~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLltG~~Pf~~~~~~~~~~~i~~~~~~~~p~~l~~~~p  389 (708)
                                 .....+.+||... ...+.+.=|||||++||.-|--.+|                      +.....++
T Consensus        98 -----------~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~----------------------e~eE~eLS  143 (229)
T 2yle_A           98 -----------AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLK----------------------ENEERELS  143 (229)
T ss_dssp             --------------------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCC----------------------TTEEECCC
T ss_pred             -----------ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCC----------------------cccchhhC
Confidence                       0233456777653 3456888999999999999863222                      11223466


Q ss_pred             hHHHHHHHHHHcC
Q 005221          390 APFRQFVEYVVNL  402 (708)
Q Consensus       390 ~~~~~l~~~~~~~  402 (708)
                      +.|.+|+..+.+.
T Consensus       144 ~~LE~LL~~Mt~~  156 (229)
T 2yle_A          144 PPLEQLIDHMANT  156 (229)
T ss_dssp             HHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHhc
Confidence            6777777666554


No 276
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.73  E-value=0.0015  Score=71.69  Aligned_cols=80  Identities=10%  Similarity=-0.003  Sum_probs=50.6

Q ss_pred             EEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCCCCCCChHHHHHHHHcCCCCCccEEEEEeeeCCEE
Q 005221          143 LERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNTLGGSHGVPRVHFKGRQGDYY  222 (708)
Q Consensus       143 i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~~~~~~~~Ei~il~~L~h~~~v~~~~~~~~~~~~~  222 (708)
                      -++.|+.|--..||++.......   .....+..+++|+....  .....+.+|..+++.|....+.+.+.....  +  
T Consensus        77 ~v~~l~gG~tN~~y~v~~~~~~~---~~~~~~~~~vlRi~~~~--~~~~~li~E~~~l~~L~~~g~~P~l~~~~~--~--  147 (429)
T 1nw1_A           77 RISRIKGGMSNMLFLCRLSEVYP---PIRNEPNKVLLRVYFNP--ETESHLVAESVIFTLLSERHLGPKLYGIFS--G--  147 (429)
T ss_dssp             EEEEECCCTTEEEEEEEECTTSC---CSSSCCSEEEEEEECSC--CCHHHHHHHHHHHHHHHHTTSSSCEEEEET--T--
T ss_pred             EEEEeCCCcccceEEEEeCCCcc---ccCCCCceEEEEEeCCC--CcHHHHHHHHHHHHHHHhCCCCCcEEEEeC--C--
Confidence            35778888889999997642000   00012467999988432  111244579999999977666677665543  2  


Q ss_pred             EEEEecCCC
Q 005221          223 VMVMDMLGP  231 (708)
Q Consensus       223 ~lvme~~gg  231 (708)
                      .+||+++.|
T Consensus       148 g~v~e~l~G  156 (429)
T 1nw1_A          148 GRLEEYIPS  156 (429)
T ss_dssp             EEEECCCCE
T ss_pred             CEEEEEeCC
Confidence            278999843


No 277
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.63  E-value=0.0069  Score=66.99  Aligned_cols=73  Identities=5%  Similarity=-0.064  Sum_probs=48.8

Q ss_pred             EEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCCCCCCChHHHHHHHHcCCCCCccEEEEEeeeCCEE
Q 005221          143 LERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNTLGGSHGVPRVHFKGRQGDYY  222 (708)
Q Consensus       143 i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~~~~~~~~Ei~il~~L~h~~~v~~~~~~~~~~~~~  222 (708)
                      -++.|+.|--..+|++....          .+..+++|+...... ......+|..+|..|...++.+.+...+.  +- 
T Consensus       112 ~i~~lsgG~tN~~y~v~~~~----------~~~~~vLRi~g~~~~-~~idR~~E~~vl~~L~~~gl~P~ll~~~~--~G-  177 (458)
T 2qg7_A          112 EFQIINGGITNILIKVKDMS----------KQAKYLIRLYGPKTD-EIINREREKKISCILYNKNIAKKIYVFFT--NG-  177 (458)
T ss_dssp             EEEEECC--CEEEEEEEETT----------TTEEEEEEEECC-CC-SCSCHHHHHHHHHHHTTSSSBCCEEEEET--TE-
T ss_pred             EEEEcCCCeEeEEEEEEECC----------CCceEEEEECCCChh-hhcCHHHHHHHHHHHHhcCCCCCEEEEeC--Ce-
Confidence            35778888889999987632          247788998754321 12223689999999988777777776653  22 


Q ss_pred             EEEEecCC
Q 005221          223 VMVMDMLG  230 (708)
Q Consensus       223 ~lvme~~g  230 (708)
                       +||+|+.
T Consensus       178 -~v~e~I~  184 (458)
T 2qg7_A          178 -RIEEFMD  184 (458)
T ss_dssp             -EEEECCC
T ss_pred             -EEEEeeC
Confidence             4999993


No 278
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=96.55  E-value=0.0042  Score=64.99  Aligned_cols=74  Identities=16%  Similarity=0.021  Sum_probs=45.5

Q ss_pred             EeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCCCCCCChHHHHHHHHcCCCCC-ccEEEEE-----eee
Q 005221          145 RKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNTLGGSHG-VPRVHFK-----GRQ  218 (708)
Q Consensus       145 ~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~~~~~~~~Ei~il~~L~h~~~-v~~~~~~-----~~~  218 (708)
                      ..|+ |....||+....           ++..+++|+...... ....+..|..+++.|....+ |+.+...     ...
T Consensus        32 ~~l~-g~~n~~y~v~~~-----------~g~~~vlK~~~~~~~-~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~   98 (328)
T 1zyl_A           32 TPLN-SYENRVYQFQDE-----------DRRRFVVKFYRPERW-TADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNH   98 (328)
T ss_dssp             EEEC-CSSSEEEEECCT-----------TCCCEEEEEECTTTS-CHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEE
T ss_pred             Eeec-CcccceEEEEcC-----------CCCEEEEEEcCCCCC-CHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEE
Confidence            4566 778899987542           355799999863311 12346679999988864322 3322221     123


Q ss_pred             CCEEEEEEecCCC
Q 005221          219 GDYYVMVMDMLGP  231 (708)
Q Consensus       219 ~~~~~lvme~~gg  231 (708)
                      ++..+++|++++|
T Consensus        99 ~g~~~~l~~~i~G  111 (328)
T 1zyl_A           99 QGFYFAVFPSVGG  111 (328)
T ss_dssp             TTEEEEEEECCCC
T ss_pred             CCEEEEEEEecCC
Confidence            5677899999954


No 279
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.47  E-value=0.0017  Score=70.00  Aligned_cols=147  Identities=14%  Similarity=0.090  Sum_probs=80.5

Q ss_pred             EeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCCCCCCChHHHHHHHHcCCCCCccEEEEEeeeCCEEEE
Q 005221          145 RKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNTLGGSHGVPRVHFKGRQGDYYVM  224 (708)
Q Consensus       145 ~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~~~~~~~~Ei~il~~L~h~~~v~~~~~~~~~~~~~~l  224 (708)
                      +.|..|--..+|++.....  . ......+..|+||+..... .......+|..+++.|....+.+.+.....++    +
T Consensus        56 ~~lsGG~TN~~y~v~~~~~--~-~~~~~~~~~~vlR~~g~~~-~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~g----~  127 (379)
T 3feg_A           56 YPVSGGLSNLLFRCSLPDH--L-PSVGEEPREVLLRLYGAIL-QGVDSLVLESVMFAILAERSLGPQLYGVFPEG----R  127 (379)
T ss_dssp             EEC-----CCEEEEECCTT--S-CCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETTE----E
T ss_pred             EEcCCcccccEEEEEeCCC--c-cccCCCCCeEEEEECCCcc-chHHHHHHHHHHHHHHHhcCCCCeEEEEcCCc----c
Confidence            4566677778898875320  0 0001134678899853321 11233458999999998777777776654432    8


Q ss_pred             EEecC-CCCHH--------------HHH---hcc----CCCCC--HHHHHHHHHHHHH-------------------HHH
Q 005221          225 VMDML-GPSLW--------------DVW---NNN----SHTMS--IEMVACIAIEAIS-------------------ILE  261 (708)
Q Consensus       225 vme~~-ggsL~--------------~~l---~~~----~~~l~--~~~~~~i~~qil~-------------------aL~  261 (708)
                      |||++ |.+|.              +.+   ...    +....  ...+..++.++..                   .+.
T Consensus       128 v~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~  207 (379)
T 3feg_A          128 LEQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMG  207 (379)
T ss_dssp             EEECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHH
T ss_pred             EEEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHH
Confidence            99999 43321              111   111    11111  3455555544422                   223


Q ss_pred             HHH----h----CCceecCCCCCcEEeCCCCCCCCCcEEEeccCccc
Q 005221          262 KMH----S----KGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLAT  300 (708)
Q Consensus       262 yLH----~----~gIvHrDIKP~NILl~~~g~~~~~~vkL~DFGla~  300 (708)
                      .|.    .    ..++|+|+.+.|||++.+.. ....+.|+||..|.
T Consensus       208 ~L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~-~~~~~~~IDwE~a~  253 (379)
T 3feg_A          208 NLRKLLESTPSPVVFCHNDIQEGNILLLSEPE-NADSLMLVDFEYSS  253 (379)
T ss_dssp             HHHHHHHTSCCCEEEECSCCCGGGEEEESCC----CCEEECCCTTCE
T ss_pred             HHHHHHhhcCCCcEEEcCCCCCCeEEEcCCCC-ccCcEEEEecccCC
Confidence            332    2    25999999999999986521 12369999999985


No 280
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=95.63  E-value=0.023  Score=62.13  Aligned_cols=81  Identities=12%  Similarity=0.109  Sum_probs=50.6

Q ss_pred             EEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCCCCCCChHHHHHHHHcCCCCCccEEEEEeeeCCEE
Q 005221          143 LERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNTLGGSHGVPRVHFKGRQGDYY  222 (708)
Q Consensus       143 i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~~~~~~~~Ei~il~~L~h~~~v~~~~~~~~~~~~~  222 (708)
                      -++.|..|--..+|++.......   .....+..+++|+..... .......+|..+++.|....+++.+....  .+  
T Consensus        74 ~v~~lsGG~TN~~y~v~~~~~~~---~~~~~~~~~vlRi~g~~t-~~~idR~~E~~~l~~L~~~gi~P~l~~~~--~~--  145 (424)
T 3mes_A           74 EVKQIFSGLTNQLFVVSIVNESM---SLSLKHPRILFRIYGKHV-GKFYDSKVELDVFRYLSNINIAPNIIADF--PE--  145 (424)
T ss_dssp             EEEEECCCSSSEEEEEEECCC--------CCCSEEEEEECCCCC--CCCCHHHHHHHHHHHHHTTSSCCEEEEE--TT--
T ss_pred             EEEEcCCCcccceEEEEeCCCcc---cccCCCCeEEEEECCCCc-chhcCHHHHHHHHHHHHhcCCCCCEEEEc--CC--
Confidence            34667778788999987642000   000015778999864432 22334568999999998777777776533  33  


Q ss_pred             EEEEecCCC
Q 005221          223 VMVMDMLGP  231 (708)
Q Consensus       223 ~lvme~~gg  231 (708)
                      ++||+++.|
T Consensus       146 ~~I~efI~G  154 (424)
T 3mes_A          146 GRIEEFIDG  154 (424)
T ss_dssp             EEEEECCCS
T ss_pred             CEEEEEeCC
Confidence            578999933


No 281
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=95.51  E-value=0.033  Score=60.32  Aligned_cols=149  Identities=15%  Similarity=0.139  Sum_probs=81.5

Q ss_pred             EeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEEEEeecCCCC----------C-CC-------CChHHHHHHHHcCCC
Q 005221          145 RKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVALKFEHRSSKG----------C-NY-------GPPYEWQVYNTLGGS  206 (708)
Q Consensus       145 ~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAlK~~~~~~~~----------~-~~-------~~~~Ei~il~~L~h~  206 (708)
                      +.|..|--..+|++.....  . .........|.+++.-.....          . ..       ....|..+++.|...
T Consensus        58 ~~l~gGlTN~~~~v~~~~~--~-~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~  134 (401)
T 3f2s_A           58 SVIRGGLSNMLFQCSLPDT--T-ATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAER  134 (401)
T ss_dssp             EEEECSSEEEEEEEECCTT--C-CCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHT
T ss_pred             EEcCCCccCceEEEEeCCC--c-ccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhc
Confidence            5565577778998875320  0 000113467888886543221          0 00       012389999999888


Q ss_pred             CCccEEEEEeeeCCEEEEEEecC-CCCHH--H-----H----------HhccC----CCCC--HHHHHHHHHHHH-----
Q 005221          207 HGVPRVHFKGRQGDYYVMVMDML-GPSLW--D-----V----------WNNNS----HTMS--IEMVACIAIEAI-----  257 (708)
Q Consensus       207 ~~v~~~~~~~~~~~~~~lvme~~-ggsL~--~-----~----------l~~~~----~~l~--~~~~~~i~~qil-----  257 (708)
                      .+.+.+......+    ++++|+ |.+|.  +     .          +....    ....  ...+..++.++.     
T Consensus       135 Gi~Pkl~~~~~~G----~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~  210 (401)
T 3f2s_A          135 SLGPKLYGIFPQG----RLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFT  210 (401)
T ss_dssp             TSSCCEEEEETTE----EEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCC
T ss_pred             CCCCeEEEEeCCC----eEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCc
Confidence            8888887775433    888999 43221  1     1          11111    1111  223444443322     


Q ss_pred             -----------------HHH----HHHHh----CCceecCCCCCcEEeCCCCC-CCCCcEEEeccCccc
Q 005221          258 -----------------SIL----EKMHS----KGYVHGDVKPENFLLGPPGT-PDEKKLFLVDLGLAT  300 (708)
Q Consensus       258 -----------------~aL----~yLH~----~gIvHrDIKP~NILl~~~g~-~~~~~vkL~DFGla~  300 (708)
                                       .-+    .+|..    ..++|+|+.+.|||++.+.. .....+.|+||..|.
T Consensus       211 ~~~~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~  279 (401)
T 3f2s_A          211 EESRIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS  279 (401)
T ss_dssp             SHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCE
T ss_pred             chhhhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCC
Confidence                             112    22322    25899999999999976510 011369999999985


No 282
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=95.40  E-value=0.044  Score=57.84  Aligned_cols=31  Identities=19%  Similarity=0.386  Sum_probs=26.1

Q ss_pred             CCceecCCCCCcEEeCCCCCCCCCcEEEeccCcccc
Q 005221          266 KGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATK  301 (708)
Q Consensus       266 ~gIvHrDIKP~NILl~~~g~~~~~~vkL~DFGla~~  301 (708)
                      ..++|+|+.+.|||++.++     .+.|+||+.+..
T Consensus       206 ~~~~HgD~~~~N~l~~~~~-----~~~~iD~e~~~~  236 (339)
T 3i1a_A          206 YVLCHSDIHAGNVLVGNEE-----SIYIIDWDEPML  236 (339)
T ss_dssp             CEEECSCCCGGGEEECGGG-----CEEECCCSSCEE
T ss_pred             ceeEeCCCCcCCEEEeCCC-----eEEEEECCCCee
Confidence            3699999999999997654     499999988753


No 283
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=93.03  E-value=0.29  Score=52.81  Aligned_cols=33  Identities=27%  Similarity=0.524  Sum_probs=25.4

Q ss_pred             ceecCCCCCcEEeCCCCC-CCCCcEEEeccCccc
Q 005221          268 YVHGDVKPENFLLGPPGT-PDEKKLFLVDLGLAT  300 (708)
Q Consensus       268 IvHrDIKP~NILl~~~g~-~~~~~vkL~DFGla~  300 (708)
                      ++|+|+.+.|||+..+.. .+...++|+||-+|.
T Consensus       246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~  279 (401)
T 3g15_A          246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS  279 (401)
T ss_dssp             EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCE
T ss_pred             eEEecCCCCeEEEecCcccCcCCeEEEechHhcc
Confidence            689999999999954321 133479999999985


No 284
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=86.16  E-value=0.67  Score=48.54  Aligned_cols=28  Identities=0%  Similarity=-0.052  Sum_probs=12.9

Q ss_pred             HHHHHHcCCCCCcccHHHHHHHHHhhhC
Q 005221          395 FVEYVVNLKFDEEPNYAKYISLFDGIVG  422 (708)
Q Consensus       395 l~~~~~~~~~~~rP~~~~l~~LL~~mL~  422 (708)
                      ++..||..+|.+||++.++...|+.|++
T Consensus       292 li~~cl~~dP~~RPs~~ei~~~L~~l~~  319 (329)
T 4aoj_A          292 IMRGCWQREPQQRHSIKDVHARLQALAQ  319 (329)
T ss_dssp             HHHHHCCSSTTTSCCHHHHHHHHHHHHH
T ss_pred             HHHHHcCcChhHCcCHHHHHHHHHHHhh
Confidence            4444444444444444444444444433


No 285
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=84.73  E-value=0.66  Score=49.11  Aligned_cols=8  Identities=0%  Similarity=-0.263  Sum_probs=3.8

Q ss_pred             hHHHHhHH
Q 005221          432 TEGAQKLI  439 (708)
Q Consensus       432 ~e~l~h~~  439 (708)
                      .+++...|
T Consensus       318 ~~li~~c~  325 (353)
T 4ase_A          318 YQTMLDCW  325 (353)
T ss_dssp             HHHHHHHT
T ss_pred             HHHHHHHc
Confidence            44455544


No 286
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=83.26  E-value=0.91  Score=47.03  Aligned_cols=8  Identities=0%  Similarity=-0.454  Sum_probs=4.3

Q ss_pred             hHHHHhHH
Q 005221          432 TEGAQKLI  439 (708)
Q Consensus       432 ~e~l~h~~  439 (708)
                      .+++...|
T Consensus       277 ~~li~~C~  284 (308)
T 4gt4_A          277 YALMIECW  284 (308)
T ss_dssp             HHHHHHHT
T ss_pred             HHHHHHHc
Confidence            44555555


No 287
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=81.16  E-value=0.68  Score=47.72  Aligned_cols=38  Identities=3%  Similarity=-0.038  Sum_probs=34.2

Q ss_pred             CCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCC
Q 005221          387 FCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPN  424 (708)
Q Consensus       387 ~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~d  424 (708)
                      .++..+.+++..|+..+|.+||++.++++.|+.++...
T Consensus       296 ~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~  333 (337)
T 3mdy_A          296 ECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQ  333 (337)
T ss_dssp             HHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhhc
Confidence            46788999999999999999999999999999988653


No 288
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=80.67  E-value=0.94  Score=46.42  Aligned_cols=33  Identities=18%  Similarity=0.267  Sum_probs=29.2

Q ss_pred             HHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCC
Q 005221          394 QFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPD  426 (708)
Q Consensus       394 ~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~  426 (708)
                      +++..|+..++.+||++.++++.|..+...-|.
T Consensus       272 ~li~~~l~~~p~~RPs~~~il~~l~~l~~~~pk  304 (307)
T 3lb7_A          272 RLVADCVKKVKEERPLFPQILSSIELLQHSLPK  304 (307)
T ss_dssp             HHHHHHSCSSSTTSCCHHHHHHHHHHHHTTCCC
T ss_pred             HHHHHHhhCChhhCcCHHHHHHHHHHHHhhccc
Confidence            589999999999999999999999988776653


No 289
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=80.66  E-value=0.93  Score=46.99  Aligned_cols=32  Identities=19%  Similarity=0.270  Sum_probs=26.1

Q ss_pred             HHHHHHHcCCCCCcccHHHHHHHHHhhhCCCC
Q 005221          394 QFVEYVVNLKFDEEPNYAKYISLFDGIVGPNP  425 (708)
Q Consensus       394 ~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP  425 (708)
                      +++..||..+|.+||++.++++.|+.+-..-|
T Consensus       272 ~li~~cl~~dP~~RPs~~ei~~~Le~l~~~lp  303 (307)
T 3omv_A          272 RLVADCVKKVKEERPLFPQILSSIELLQHSLP  303 (307)
T ss_dssp             HHHHHHTCSSSTTSCCHHHHHHHHHHHHTTCC
T ss_pred             HHHHHHcCCCHhHCcCHHHHHHHHHHHhccCC
Confidence            58999999999999999998887766544333


No 290
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=80.48  E-value=1.2  Score=45.78  Aligned_cols=44  Identities=14%  Similarity=0.156  Sum_probs=32.0

Q ss_pred             HHHHHHHHcCCCCCccc--HHHHHHHHHhhhCCCCCCCCcchHHHH
Q 005221          393 RQFVEYVVNLKFDEEPN--YAKYISLFDGIVGPNPDIRPISTEGAQ  436 (708)
Q Consensus       393 ~~l~~~~~~~~~~~rP~--~~~l~~LL~~mL~~dP~~Rps~~e~l~  436 (708)
                      .+++..+........|.  ..++.+|+.+|+..||++|||+.|++.
T Consensus       237 ~~~~~~i~~~~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~  282 (299)
T 4asz_A          237 NEVIECITQGRVLQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHT  282 (299)
T ss_dssp             HHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHcCCCCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence            34555555544434443  268999999999999999999999843


No 291
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=80.05  E-value=1.4  Score=45.26  Aligned_cols=41  Identities=12%  Similarity=0.207  Sum_probs=34.2

Q ss_pred             ccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCC
Q 005221          384 LCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPN  424 (708)
Q Consensus       384 l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~d  424 (708)
                      .+..++..+.+++..|+..+|.+||++.++++.|+.++...
T Consensus       265 ~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~  305 (327)
T 3lxl_A          265 APPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGS  305 (327)
T ss_dssp             CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC----
T ss_pred             CCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhh
Confidence            45678999999999999999999999999999999887653


No 292
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=78.88  E-value=0.89  Score=45.91  Aligned_cols=35  Identities=3%  Similarity=-0.122  Sum_probs=30.8

Q ss_pred             CCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhh
Q 005221          386 CFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGI  420 (708)
Q Consensus       386 ~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~m  420 (708)
                      ..++..+.+++..|+..+|.+||++.++++.|+++
T Consensus       266 ~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i  300 (301)
T 3q4u_A          266 DPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI  300 (301)
T ss_dssp             SHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred             CccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence            34567899999999999999999999999988764


No 293
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=78.77  E-value=0.88  Score=46.48  Aligned_cols=35  Identities=14%  Similarity=0.368  Sum_probs=29.1

Q ss_pred             HHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCC
Q 005221          394 QFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIR  428 (708)
Q Consensus       394 ~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~R  428 (708)
                      +++..|+..+|.+||++.++++.|..+....|..+
T Consensus       278 ~li~~~l~~dp~~Rps~~~ll~~L~~~~~~~~~~~  312 (317)
T 2buj_A          278 QLLNSMMTVDPHQRPHIPLLLSQLEALQPPAPGQH  312 (317)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHTCCCCCC--
T ss_pred             HHHHHHhhcChhhCCCHHHHHHHhhhcCCCCCCCC
Confidence            48999999999999999999999998887766544


No 294
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=77.37  E-value=1  Score=45.75  Aligned_cols=30  Identities=7%  Similarity=0.225  Sum_probs=25.5

Q ss_pred             HHHHHHHcCCCCCcccHHHHHHHHHhhhCC
Q 005221          394 QFVEYVVNLKFDEEPNYAKYISLFDGIVGP  423 (708)
Q Consensus       394 ~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~  423 (708)
                      +++..|+..++.+||++.++++.|++++..
T Consensus       279 ~li~~~l~~dp~~Rps~~ell~~L~~~~~~  308 (313)
T 1t46_A          279 DIMKTCWDADPLKRPTFKQIVQLIEKQISE  308 (313)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHcCCCchhCcCHHHHHHHHHHHHHH
Confidence            588899999999999999998888887753


No 295
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=77.17  E-value=1.1  Score=44.40  Aligned_cols=29  Identities=7%  Similarity=0.327  Sum_probs=25.5

Q ss_pred             HHHHHHHcCCCCCcccHHHHHHHHHhhhC
Q 005221          394 QFVEYVVNLKFDEEPNYAKYISLFDGIVG  422 (708)
Q Consensus       394 ~l~~~~~~~~~~~rP~~~~l~~LL~~mL~  422 (708)
                      +++..|+..++.+||++.++.+.|+.+..
T Consensus       242 ~li~~~l~~~p~~Rps~~~il~~L~~l~~  270 (271)
T 3kmu_A          242 KLMKICMNEDPAKRPKFDMIVPILEKMQD  270 (271)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred             HHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence            58899999999999999999999888754


No 296
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=77.06  E-value=1.1  Score=45.08  Aligned_cols=27  Identities=7%  Similarity=0.215  Sum_probs=24.0

Q ss_pred             HHHHHHHcCCCCCcccHHHHHHHHHhh
Q 005221          394 QFVEYVVNLKFDEEPNYAKYISLFDGI  420 (708)
Q Consensus       394 ~l~~~~~~~~~~~rP~~~~l~~LL~~m  420 (708)
                      +++..|+..++.+||++.++++.|+.+
T Consensus       261 ~li~~~l~~dp~~Rps~~~ll~~L~~l  287 (287)
T 4f0f_A          261 NVIELCWSGDPKKRPHFSYIVKELSEL  287 (287)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred             HHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence            589999999999999999999888764


No 297
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=76.59  E-value=2  Score=45.48  Aligned_cols=12  Identities=8%  Similarity=0.044  Sum_probs=5.7

Q ss_pred             cHHHHHHHHHhh
Q 005221          409 NYAKYISLFDGI  420 (708)
Q Consensus       409 ~~~~l~~LL~~m  420 (708)
                      +..++...+...
T Consensus       298 ~~~~~~~~~~~~  309 (382)
T 3tt0_A          298 PVEELFKLLKEG  309 (382)
T ss_dssp             CHHHHHHHHHTT
T ss_pred             CHHHHHHHHHcC
Confidence            344555555443


No 298
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=76.53  E-value=1.1  Score=44.86  Aligned_cols=29  Identities=7%  Similarity=0.178  Sum_probs=26.3

Q ss_pred             HHHHHHHcCCCCCcccHHHHHHHHHhhhC
Q 005221          394 QFVEYVVNLKFDEEPNYAKYISLFDGIVG  422 (708)
Q Consensus       394 ~l~~~~~~~~~~~rP~~~~l~~LL~~mL~  422 (708)
                      +++..|+..+|.+||++.++.+.|..++.
T Consensus       248 ~li~~~l~~~p~~Rps~~~l~~~l~~~~~  276 (281)
T 1mp8_A          248 SLMTKCWAYDPSRRPRFTELKAQLSTILE  276 (281)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence            58999999999999999999999988874


No 299
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=76.39  E-value=1.1  Score=46.33  Aligned_cols=35  Identities=6%  Similarity=0.155  Sum_probs=26.6

Q ss_pred             HHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCC
Q 005221          394 QFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIR  428 (708)
Q Consensus       394 ~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~R  428 (708)
                      +++..|+..++.+||++.++.+.|..++...++.+
T Consensus       306 ~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~~~~  340 (344)
T 1rjb_A          306 IIMQSCWAFDSRKRPSFPNLTSFLGCQLADAEEAM  340 (344)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHHC-------
T ss_pred             HHHHHHcCCCchhCcCHHHHHHHHHHHHHHHHHHH
Confidence            48999999999999999999999999998766544


No 300
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=76.07  E-value=1.2  Score=45.10  Aligned_cols=38  Identities=16%  Similarity=0.199  Sum_probs=34.1

Q ss_pred             cCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhC
Q 005221          385 CCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVG  422 (708)
Q Consensus       385 ~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~  422 (708)
                      +..+|..+.+++..|+..+|.+||++.++.+.|+.++.
T Consensus       254 ~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~  291 (295)
T 3ugc_A          254 PDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD  291 (295)
T ss_dssp             CTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHH
Confidence            34688999999999999999999999999999988764


No 301
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=75.68  E-value=1.2  Score=44.92  Aligned_cols=39  Identities=13%  Similarity=0.261  Sum_probs=35.1

Q ss_pred             ccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhC
Q 005221          384 LCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVG  422 (708)
Q Consensus       384 l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~  422 (708)
                      .+..+|+.+.+++..|+..+|.+||++.++++.|+.+|+
T Consensus       264 ~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll~  302 (302)
T 4e5w_A          264 CPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALLK  302 (302)
T ss_dssp             CCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHC
T ss_pred             CCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhC
Confidence            345688999999999999999999999999999998874


No 302
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=75.50  E-value=1.2  Score=44.55  Aligned_cols=34  Identities=6%  Similarity=0.044  Sum_probs=26.1

Q ss_pred             HHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCC
Q 005221          394 QFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDI  427 (708)
Q Consensus       394 ~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~  427 (708)
                      +++..|+..++.+||++.++.+.|..+...+...
T Consensus       256 ~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~~  289 (291)
T 1u46_A          256 NVMVQCWAHKPEDRPTFVALRDFLLEAQPTDMRA  289 (291)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHHC------
T ss_pred             HHHHHHccCCcccCcCHHHHHHHHHHhCccchhh
Confidence            5899999999999999999999999988765543


No 303
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=75.44  E-value=1.7  Score=43.64  Aligned_cols=30  Identities=23%  Similarity=0.669  Sum_probs=26.8

Q ss_pred             HHHHHHHcCCCCCcccHHHHHHHHHhhhCC
Q 005221          394 QFVEYVVNLKFDEEPNYAKYISLFDGIVGP  423 (708)
Q Consensus       394 ~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~  423 (708)
                      +++..|+..++.+||++.++.+.|+.++..
T Consensus       252 ~li~~~l~~dp~~Rps~~~l~~~l~~~~~~  281 (296)
T 3uzp_A          252 TYLNFCRSLRFDDKPDYSYLRQLFRNLFHR  281 (296)
T ss_dssp             HHHHHHHTSCTTCCCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhcCcCcCCCHHHHHHHHHHHHHh
Confidence            489999999999999999999999887654


No 304
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=75.41  E-value=1.7  Score=43.56  Aligned_cols=30  Identities=23%  Similarity=0.669  Sum_probs=27.0

Q ss_pred             HHHHHHHcCCCCCcccHHHHHHHHHhhhCC
Q 005221          394 QFVEYVVNLKFDEEPNYAKYISLFDGIVGP  423 (708)
Q Consensus       394 ~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~  423 (708)
                      +++..|+..+|.+||++.++.++|+.++..
T Consensus       252 ~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~  281 (296)
T 4hgt_A          252 TYLNFCRSLRFDDKPDYSYLRQLFRNLFHR  281 (296)
T ss_dssp             HHHHHHHTSCTTCCCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhcCCCCCCCHHHHHHHHHHHHHH
Confidence            589999999999999999999999988753


No 305
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=75.10  E-value=1.3  Score=45.13  Aligned_cols=32  Identities=6%  Similarity=0.115  Sum_probs=27.8

Q ss_pred             HHHHHHHcCCCCCcccHHHHHHHHHhhhCCCC
Q 005221          394 QFVEYVVNLKFDEEPNYAKYISLFDGIVGPNP  425 (708)
Q Consensus       394 ~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP  425 (708)
                      +++..|+..++..||++.++++.|..++..-|
T Consensus       280 ~li~~~l~~dp~~Rps~~~l~~~L~~l~~~lp  311 (313)
T 3brb_A          280 EIMYSCWRTDPLDRPTFSVLRLQLEKLLESLP  311 (313)
T ss_dssp             HHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC-
T ss_pred             HHHHHHcCCChhhCcCHHHHHHHHHHHHHhcC
Confidence            58999999999999999999999998886544


No 306
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=73.79  E-value=1.5  Score=44.70  Aligned_cols=30  Identities=13%  Similarity=0.193  Sum_probs=26.6

Q ss_pred             HHHHHHHcCCCCCcccHHHHHHHHHhhhCC
Q 005221          394 QFVEYVVNLKFDEEPNYAKYISLFDGIVGP  423 (708)
Q Consensus       394 ~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~  423 (708)
                      +++..|+..++.+||++.++.+.|+++...
T Consensus       269 ~li~~~l~~dp~~Rps~~~il~~l~~l~~~  298 (310)
T 2wqm_A          269 QLVNMCINPDPEKRPDVTYVYDVAKRMHAC  298 (310)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHcCCChhhCCCHHHHHHHHHHHHHh
Confidence            589999999999999999999999887643


No 307
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=73.79  E-value=1.5  Score=44.27  Aligned_cols=28  Identities=14%  Similarity=0.381  Sum_probs=26.0

Q ss_pred             HHHHHHcCCCCCcccHHHHHHHHHhhhC
Q 005221          395 FVEYVVNLKFDEEPNYAKYISLFDGIVG  422 (708)
Q Consensus       395 l~~~~~~~~~~~rP~~~~l~~LL~~mL~  422 (708)
                      ++..|+..++.+||++.++++.|+.+++
T Consensus       261 li~~~l~~~p~~Rps~~ell~~L~~l~~  288 (289)
T 3og7_A          261 LMAECLKKKRDERPSFPRILAEIEELAR  288 (289)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred             HHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence            8999999999999999999999998865


No 308
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=73.71  E-value=1.5  Score=43.99  Aligned_cols=30  Identities=10%  Similarity=0.274  Sum_probs=26.5

Q ss_pred             HHHHHHHcCCCCCcccHHHHHHHHHhhhCC
Q 005221          394 QFVEYVVNLKFDEEPNYAKYISLFDGIVGP  423 (708)
Q Consensus       394 ~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~  423 (708)
                      +++..|+..++.+||++.++.+.|..++..
T Consensus       243 ~li~~~l~~dp~~Rps~~~~~~~l~~~~~~  272 (288)
T 3kfa_A          243 ELMRACWQWNPSDRPSFAEIHQAFETMFQE  272 (288)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHhCCChhhCcCHHHHHHHHHHHHHh
Confidence            589999999999999999999998888763


No 309
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=73.70  E-value=1.5  Score=45.22  Aligned_cols=29  Identities=10%  Similarity=0.206  Sum_probs=24.2

Q ss_pred             HHHHHHHcCCCCCcccHHHHHHHHHhhhC
Q 005221          394 QFVEYVVNLKFDEEPNYAKYISLFDGIVG  422 (708)
Q Consensus       394 ~l~~~~~~~~~~~rP~~~~l~~LL~~mL~  422 (708)
                      +++..|+..+|.+||++.++.+.|+.++.
T Consensus       298 ~li~~~l~~~p~~Rps~~~l~~~L~~~~~  326 (333)
T 2i1m_A          298 SIMQACWALEPTHRPTFQQICSFLQEQAQ  326 (333)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHhccChhhCcCHHHHHHHHHHHHH
Confidence            48888999999999988888888887764


No 310
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=73.62  E-value=2  Score=43.28  Aligned_cols=29  Identities=7%  Similarity=0.131  Sum_probs=26.5

Q ss_pred             HHHHHHHcCCCCCcccHHHHHHHHHhhhC
Q 005221          394 QFVEYVVNLKFDEEPNYAKYISLFDGIVG  422 (708)
Q Consensus       394 ~l~~~~~~~~~~~rP~~~~l~~LL~~mL~  422 (708)
                      +++..|+..++.+||++.++.+.|+.++.
T Consensus       251 ~li~~~l~~dp~~Rps~~~l~~~L~~~~~  279 (291)
T 1xbb_A          251 DLMNLCWTYDVENRPGFAAVELRLRNYYY  279 (291)
T ss_dssp             HHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence            58999999999999999999999998875


No 311
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=73.34  E-value=3  Score=42.64  Aligned_cols=40  Identities=13%  Similarity=0.229  Sum_probs=35.1

Q ss_pred             ccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCC
Q 005221          384 LCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGP  423 (708)
Q Consensus       384 l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~  423 (708)
                      .+..+|..+.+++..|+..++.+||++.++++.|+.++..
T Consensus       272 ~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~  311 (318)
T 3lxp_A          272 RPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEK  311 (318)
T ss_dssp             CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             CCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHh
Confidence            4567899999999999999999999999999988887643


No 312
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=72.99  E-value=1.6  Score=43.62  Aligned_cols=29  Identities=10%  Similarity=0.194  Sum_probs=25.3

Q ss_pred             HHHHHHHcCCCCCcccHHHHHHHHHhhhC
Q 005221          394 QFVEYVVNLKFDEEPNYAKYISLFDGIVG  422 (708)
Q Consensus       394 ~l~~~~~~~~~~~rP~~~~l~~LL~~mL~  422 (708)
                      +++..|+..++.+||++.++.+.|+.+..
T Consensus       245 ~li~~~l~~~p~~Rps~~~l~~~L~~i~~  273 (278)
T 1byg_A          245 EVMKNCWHLDAAMRPSFLQLREQLEHIKT  273 (278)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHhcCChhhCCCHHHHHHHHHHHHh
Confidence            58899999999999999999998887754


No 313
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=72.69  E-value=1.6  Score=44.56  Aligned_cols=32  Identities=6%  Similarity=0.181  Sum_probs=28.4

Q ss_pred             HHHHHHHcCCCCCcccHHHHHHHHHhhhCCCC
Q 005221          394 QFVEYVVNLKFDEEPNYAKYISLFDGIVGPNP  425 (708)
Q Consensus       394 ~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP  425 (708)
                      +++..|+..++.+||++.++.+.|..+...-|
T Consensus       235 ~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~  266 (307)
T 2eva_A          235 SLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFP  266 (307)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHHGGGCC
T ss_pred             HHHHHHhcCChhhCcCHHHHHHHHHHHHHhcc
Confidence            58999999999999999999999998876544


No 314
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=72.62  E-value=1.6  Score=43.87  Aligned_cols=30  Identities=13%  Similarity=0.201  Sum_probs=24.3

Q ss_pred             HHHHHHHcCCCCCcccHHHHHHHHHhhhCC
Q 005221          394 QFVEYVVNLKFDEEPNYAKYISLFDGIVGP  423 (708)
Q Consensus       394 ~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~  423 (708)
                      +++..|+..++.+||++.++.+.|+.++..
T Consensus       259 ~li~~~l~~~p~~Rps~~~ll~~l~~~~~~  288 (298)
T 3pls_A          259 QVMQQCWEADPAVRPTFRVLVGEVEQIVSA  288 (298)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence            588899999999999988887777776543


No 315
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=71.38  E-value=1.8  Score=44.73  Aligned_cols=31  Identities=10%  Similarity=0.179  Sum_probs=27.5

Q ss_pred             HHHHHHHcCCCCCcccHHHHHHHHHhhhCCC
Q 005221          394 QFVEYVVNLKFDEEPNYAKYISLFDGIVGPN  424 (708)
Q Consensus       394 ~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~d  424 (708)
                      +++..|+..++.+||++.++++.|+.++...
T Consensus       290 ~li~~~l~~dp~~Rps~~ell~~L~~l~~~~  320 (334)
T 2pvf_A          290 MMMRDCWHAVPSQRPTFKQLVEDLDRILTLT  320 (334)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHccCChhhCcCHHHHHHHHHHHHhcc
Confidence            5899999999999999999999999887653


No 316
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=71.32  E-value=1.8  Score=43.63  Aligned_cols=31  Identities=13%  Similarity=0.209  Sum_probs=26.8

Q ss_pred             HHHHHHHcCCCCCcccHHHHHHHHHhhhCCC
Q 005221          394 QFVEYVVNLKFDEEPNYAKYISLFDGIVGPN  424 (708)
Q Consensus       394 ~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~d  424 (708)
                      +++..|+..++.+||++.++++.|..++..-
T Consensus       263 ~li~~~l~~~p~~Rps~~ell~~L~~~~~~~  293 (298)
T 3f66_A          263 EVMLKCWHPKAEMRPSFSELVSRISAIFSTF  293 (298)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHHHHTS
T ss_pred             HHHHHHcCCChhhCcCHHHHHHHHHHHHHhh
Confidence            4889999999999999999999988887643


No 317
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=71.14  E-value=1.8  Score=44.31  Aligned_cols=30  Identities=13%  Similarity=0.223  Sum_probs=26.7

Q ss_pred             HHHHHHHcCCCCCcccHHHHHHHHHhhhCC
Q 005221          394 QFVEYVVNLKFDEEPNYAKYISLFDGIVGP  423 (708)
Q Consensus       394 ~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~  423 (708)
                      +++..|+..+|.+||++.++.+.|+.++..
T Consensus       270 ~li~~~l~~dP~~Rps~~~ll~~L~~~~~~  299 (309)
T 3p86_A          270 AIIEGCWTNEPWKRPSFATIMDLLRPLIKS  299 (309)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHHHC-
T ss_pred             HHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence            389999999999999999999999998864


No 318
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=70.96  E-value=2.5  Score=43.87  Aligned_cols=39  Identities=23%  Similarity=0.308  Sum_probs=34.5

Q ss_pred             CCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCC
Q 005221          387 FCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNP  425 (708)
Q Consensus       387 ~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP  425 (708)
                      .+|..+.+++..|+..++.+||++.++++.|+.+....+
T Consensus       293 ~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~  331 (345)
T 2v62_A          293 SSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHGIPLG  331 (345)
T ss_dssp             SCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTCCCCC
T ss_pred             ccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccCCccc
Confidence            578999999999999999999999999999998765443


No 319
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=70.65  E-value=1.8  Score=44.42  Aligned_cols=37  Identities=16%  Similarity=0.204  Sum_probs=32.8

Q ss_pred             cCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhh
Q 005221          385 CCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIV  421 (708)
Q Consensus       385 ~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL  421 (708)
                      +..+|..+.+++..|+..+|.+||++.++.+.|+.+.
T Consensus       285 ~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~  321 (326)
T 2w1i_A          285 PDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIR  321 (326)
T ss_dssp             CTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence            3468899999999999999999999999988888764


No 320
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=70.59  E-value=2.6  Score=43.87  Aligned_cols=37  Identities=16%  Similarity=0.422  Sum_probs=33.7

Q ss_pred             CCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCC
Q 005221          387 FCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGP  423 (708)
Q Consensus       387 ~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~  423 (708)
                      .+|..+.+++..|+..++.+||++.++.+.|..++..
T Consensus       301 ~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~  337 (352)
T 2jii_A          301 RPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQD  337 (352)
T ss_dssp             CCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHH
T ss_pred             CCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHh
Confidence            5789999999999999999999999999999988754


No 321
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=70.49  E-value=2.2  Score=42.91  Aligned_cols=29  Identities=31%  Similarity=0.682  Sum_probs=26.6

Q ss_pred             HHHHHHcCCCCCcccHHHHHHHHHhhhCC
Q 005221          395 FVEYVVNLKFDEEPNYAKYISLFDGIVGP  423 (708)
Q Consensus       395 l~~~~~~~~~~~rP~~~~l~~LL~~mL~~  423 (708)
                      ++..|+..+|.+||++.++.++|..++..
T Consensus       256 li~~~l~~dp~~RP~~~~l~~~l~~~~~~  284 (298)
T 1csn_A          256 YMHYARNLAFDATPDYDYLQGLFSKVLER  284 (298)
T ss_dssp             HHHHHHHCCTTCCCCHHHHHHHHHHHHHH
T ss_pred             HHHHHhcCCcccCCCHHHHHHHHHHHHHh
Confidence            89999999999999999999999988753


No 322
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=69.98  E-value=2.6  Score=43.53  Aligned_cols=30  Identities=17%  Similarity=0.359  Sum_probs=26.9

Q ss_pred             HHHHHHHcCCCCCcccHHHHHHHHHhhhCC
Q 005221          394 QFVEYVVNLKFDEEPNYAKYISLFDGIVGP  423 (708)
Q Consensus       394 ~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~  423 (708)
                      +++..|+..++..||++.++.+.|+.++..
T Consensus       281 ~li~~~l~~~p~~Rps~~~l~~~L~~~~~~  310 (333)
T 1mqb_A          281 QLMMQCWQQERARRPKFADIVSILDKLIRA  310 (333)
T ss_dssp             HHHHHHTCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred             HHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence            589999999999999999999999888753


No 323
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=69.04  E-value=2.1  Score=45.15  Aligned_cols=30  Identities=10%  Similarity=0.180  Sum_probs=26.9

Q ss_pred             HHHHHHHcCCCCCcccHHHHHHHHHhhhCC
Q 005221          394 QFVEYVVNLKFDEEPNYAKYISLFDGIVGP  423 (708)
Q Consensus       394 ~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~  423 (708)
                      +++..|+..++..||++.++++.|+.++..
T Consensus       336 ~li~~~l~~dP~~Rpt~~ell~~L~~il~~  365 (370)
T 2psq_A          336 MMMRDCWHAVPSQRPTFKQLVEDLDRILTL  365 (370)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence            589999999999999999999999988753


No 324
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=68.98  E-value=2.2  Score=44.07  Aligned_cols=29  Identities=14%  Similarity=-0.038  Sum_probs=26.5

Q ss_pred             HHHHHHHHhhhCCCCCCCCcchHHHHhHH
Q 005221          411 AKYISLFDGIVGPNPDIRPISTEGAQKLI  439 (708)
Q Consensus       411 ~~l~~LL~~mL~~dP~~Rps~~e~l~h~~  439 (708)
                      ..+.+||.+||..||.+||++.++++.+-
T Consensus       281 ~~l~~li~~~l~~dp~~Rps~~eil~~L~  309 (325)
T 3kul_A          281 HALHQLMLDCWHKDRAQRPRFSQIVSVLD  309 (325)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             HHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence            57999999999999999999999988753


No 325
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=68.90  E-value=2.2  Score=42.49  Aligned_cols=30  Identities=10%  Similarity=0.272  Sum_probs=26.5

Q ss_pred             HHHHHHHcCCCCCcccHHHHHHHHHhhhCC
Q 005221          394 QFVEYVVNLKFDEEPNYAKYISLFDGIVGP  423 (708)
Q Consensus       394 ~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~  423 (708)
                      +++..|+..++.+||++.++.+.|+.++..
T Consensus       241 ~li~~~l~~~p~~Rps~~~l~~~l~~~~~~  270 (279)
T 1qpc_A          241 QLMRLCWKERPEDRPTFDYLRSVLEDFFTA  270 (279)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHhccChhhCCCHHHHHHHHHHHHHh
Confidence            589999999999999999999999887753


No 326
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=68.88  E-value=2.2  Score=44.09  Aligned_cols=30  Identities=13%  Similarity=0.248  Sum_probs=27.3

Q ss_pred             HHHHHHHcCCCCCcccHHHHHHHHHhhhCC
Q 005221          394 QFVEYVVNLKFDEEPNYAKYISLFDGIVGP  423 (708)
Q Consensus       394 ~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~  423 (708)
                      +++..|+..+|.+||++.++++.|..++..
T Consensus       250 ~li~~~l~~dp~~Rps~~ell~~L~~~~~~  279 (327)
T 3lzb_A          250 MIMRKCWMIDADSRPKFRELIIEFSKMARD  279 (327)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHHHTS
T ss_pred             HHHHHHcCCChhHCcCHHHHHHHHHHHHhC
Confidence            489999999999999999999999998864


No 327
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=68.58  E-value=2.3  Score=43.28  Aligned_cols=31  Identities=13%  Similarity=0.427  Sum_probs=25.3

Q ss_pred             HHHHHHHcCCCCCcccHHHHHHHHHhhhCCC
Q 005221          394 QFVEYVVNLKFDEEPNYAKYISLFDGIVGPN  424 (708)
Q Consensus       394 ~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~d  424 (708)
                      +++..|+..++.+||++.++++.|+.+....
T Consensus       274 ~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~  304 (319)
T 2y4i_B          274 DILLFCWAFEQEERPTFTKLMDMLEKLPKRN  304 (319)
T ss_dssp             HHHHHHHCSSTTTSCCHHHHHHHHTTC----
T ss_pred             HHHHHHhcCChhhCcCHHHHHHHHHHHHHhh
Confidence            3899999999999999999999999988753


No 328
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=66.87  E-value=2  Score=43.73  Aligned_cols=28  Identities=14%  Similarity=0.203  Sum_probs=21.6

Q ss_pred             HHHHHHHHhhhCCCCCCCCcchHHHHhH
Q 005221          411 AKYISLFDGIVGPNPDIRPISTEGAQKL  438 (708)
Q Consensus       411 ~~l~~LL~~mL~~dP~~Rps~~e~l~h~  438 (708)
                      ..+.+|+.+||..||++|||+.++++.+
T Consensus       250 ~~l~~li~~~l~~dP~~Rps~~~l~~~L  277 (310)
T 3s95_A          250 PSFFPITVRCCDLDPEKRPSFVKLEHWL  277 (310)
T ss_dssp             TTHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             HHHHHHHHHHccCChhhCcCHHHHHHHH
Confidence            3577888888888888888888877643


No 329
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=66.11  E-value=2.6  Score=44.46  Aligned_cols=26  Identities=12%  Similarity=0.262  Sum_probs=16.1

Q ss_pred             HHHHHHcCCCCCcccHHHHHHHHHhh
Q 005221          395 FVEYVVNLKFDEEPNYAKYISLFDGI  420 (708)
Q Consensus       395 l~~~~~~~~~~~rP~~~~l~~LL~~m  420 (708)
                      ++..|+..+|.+||++.++.+.|+.+
T Consensus       347 li~~cl~~dP~~Rps~~~i~~~L~~i  372 (377)
T 3cbl_A          347 LMEQCWAYEPGQRPSFSTIYQELQSI  372 (377)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHcCCCchhCcCHHHHHHHHHHH
Confidence            55666666666666666666655554


No 330
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=64.79  E-value=2.9  Score=44.24  Aligned_cols=32  Identities=13%  Similarity=0.159  Sum_probs=27.8

Q ss_pred             HHHHHHcCCCCCcccHHHHHHHHHhhhCCCCC
Q 005221          395 FVEYVVNLKFDEEPNYAKYISLFDGIVGPNPD  426 (708)
Q Consensus       395 l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~  426 (708)
                      ++..|+..++.+||++.++.+.|..++..-..
T Consensus       328 li~~cl~~dp~~RPs~~ell~~L~~i~~~~~~  359 (373)
T 3c1x_A          328 VMLKCWHPKAEMRPSFSELVSRISAIFSTFIG  359 (373)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHHHHHHHHHTCCS
T ss_pred             HHHHHcCCChhhCcCHHHHHHHHHHHHHhccc
Confidence            88999999999999999999999988765443


No 331
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=61.36  E-value=7.9  Score=40.33  Aligned_cols=38  Identities=18%  Similarity=0.322  Sum_probs=34.5

Q ss_pred             CCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCC
Q 005221          386 CFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGP  423 (708)
Q Consensus       386 ~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~  423 (708)
                      ..+|..+.+++..|+..++.+||++.+++++|..++..
T Consensus       293 ~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~  330 (364)
T 3op5_A          293 ANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKA  330 (364)
T ss_dssp             TCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHH
T ss_pred             ccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHH
Confidence            35789999999999999999999999999999988763


No 332
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=60.75  E-value=3.8  Score=43.25  Aligned_cols=30  Identities=13%  Similarity=0.329  Sum_probs=27.1

Q ss_pred             HHHHHHHcCCCCCcccHHHHHHHHHhhhCC
Q 005221          394 QFVEYVVNLKFDEEPNYAKYISLFDGIVGP  423 (708)
Q Consensus       394 ~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~  423 (708)
                      +++..|+..++..||++.++.+.|+.++..
T Consensus       281 ~li~~cl~~dp~~RPs~~~i~~~L~~~~~~  310 (373)
T 2qol_A          281 QLMLDCWQKDRNNRPKFEQIVSILDKLIRN  310 (373)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             HHHHHHhCcChhhCcCHHHHHHHHHHHHhC
Confidence            589999999999999999999999988753


No 333
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=58.39  E-value=6.7  Score=39.48  Aligned_cols=32  Identities=3%  Similarity=-0.028  Sum_probs=25.8

Q ss_pred             HHHHHHHcCCCCCcc-cHHHHHHHHHhhhCCCC
Q 005221          394 QFVEYVVNLKFDEEP-NYAKYISLFDGIVGPNP  425 (708)
Q Consensus       394 ~l~~~~~~~~~~~rP-~~~~l~~LL~~mL~~dP  425 (708)
                      +++..|+..++.+|| +..++.+.|..++..+.
T Consensus       246 ~li~~~l~~dp~~R~~~~~~l~~~l~~~~~~~~  278 (294)
T 4eqm_A          246 NVILRATEKDKANRYKTIQEMKDDLSSVLHENR  278 (294)
T ss_dssp             HHHHHHSCSSGGGSCSSHHHHHHHHHTSSSSSS
T ss_pred             HHHHHHhcCCHhHccccHHHHHHHHHHHHhhcc
Confidence            478899999999998 67788888888877644


No 334
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=56.78  E-value=4.7  Score=44.36  Aligned_cols=28  Identities=29%  Similarity=0.201  Sum_probs=25.8

Q ss_pred             HHHHHHHHhhhCCCCCCCCcchHHHHhH
Q 005221          411 AKYISLFDGIVGPNPDIRPISTEGAQKL  438 (708)
Q Consensus       411 ~~l~~LL~~mL~~dP~~Rps~~e~l~h~  438 (708)
                      ..+.+||.+||..||++|||+.++++.+
T Consensus       446 ~~l~~li~~cl~~dP~~RPs~~el~~~L  473 (495)
T 1opk_A          446 EKVYELMRACWQWNPSDRPSFAEIHQAF  473 (495)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             HHHHHHHHHHcCcChhHCcCHHHHHHHH
Confidence            5799999999999999999999998764


No 335
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=56.72  E-value=4.8  Score=43.68  Aligned_cols=10  Identities=10%  Similarity=0.076  Sum_probs=4.5

Q ss_pred             HHHHHHHHhh
Q 005221          411 AKYISLFDGI  420 (708)
Q Consensus       411 ~~l~~LL~~m  420 (708)
                      .++...+..-
T Consensus       392 ~~~~~~i~~~  401 (454)
T 1qcf_A          392 PEVIRALERG  401 (454)
T ss_dssp             HHHHHHHHHT
T ss_pred             HHHHHHHHcC
Confidence            4444444443


No 336
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=56.63  E-value=4.8  Score=43.66  Aligned_cols=28  Identities=18%  Similarity=0.062  Sum_probs=25.5

Q ss_pred             HHHHHHHHhhhCCCCCCCCcchHHHHhH
Q 005221          411 AKYISLFDGIVGPNPDIRPISTEGAQKL  438 (708)
Q Consensus       411 ~~l~~LL~~mL~~dP~~Rps~~e~l~h~  438 (708)
                      ..+.+||.+||..||++|||+.++++.+
T Consensus       408 ~~l~~li~~cl~~dP~~Rpt~~~l~~~L  435 (452)
T 1fmk_A          408 ESLHDLMCQCWRKEPEERPTFEYLQAFL  435 (452)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             HHHHHHHHHHccCChhhCcCHHHHHHHH
Confidence            5789999999999999999999998764


No 337
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=56.27  E-value=4.9  Score=43.56  Aligned_cols=9  Identities=0%  Similarity=-0.189  Sum_probs=5.2

Q ss_pred             chHHHHhHH
Q 005221          431 STEGAQKLI  439 (708)
Q Consensus       431 ~~e~l~h~~  439 (708)
                      ..+++...|
T Consensus       415 l~~li~~cl  423 (450)
T 1k9a_A          415 VYDVMKNCW  423 (450)
T ss_dssp             HHHHHHHHT
T ss_pred             HHHHHHHHc
Confidence            455666665


No 338
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=54.50  E-value=7.4  Score=39.20  Aligned_cols=31  Identities=6%  Similarity=-0.040  Sum_probs=25.7

Q ss_pred             HHHHHHHcCCCCCcccHHHHHHHHHhhhCCCC
Q 005221          394 QFVEYVVNLKFDEEPNYAKYISLFDGIVGPNP  425 (708)
Q Consensus       394 ~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP  425 (708)
                      +++..|+..++..| +..++.+.|..+...+.
T Consensus       238 ~li~~~l~~dP~~R-s~~el~~~L~~~~~~~~  268 (286)
T 3uqc_A          238 AVAARSVQGDGGIR-SASTLLNLMQQATAVAD  268 (286)
T ss_dssp             HHHHHHHCTTSSCC-CHHHHHHHHHHHHC---
T ss_pred             HHHHHHcccCCccC-CHHHHHHHHHHHhccCC
Confidence            58999999999999 99999999998877543


No 339
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=54.18  E-value=5.8  Score=40.60  Aligned_cols=35  Identities=0%  Similarity=-0.141  Sum_probs=30.7

Q ss_pred             CChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhC
Q 005221          388 CPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVG  422 (708)
Q Consensus       388 ~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~  422 (708)
                      ++..+.+++..||..+|..||++.++.+.|+.+.+
T Consensus       263 ~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~  297 (303)
T 3hmm_A          263 ALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ  297 (303)
T ss_dssp             HHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHH
Confidence            44578899999999999999999999999888764


No 340
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=53.80  E-value=5.4  Score=40.50  Aligned_cols=34  Identities=3%  Similarity=-0.026  Sum_probs=26.2

Q ss_pred             HHHHHHcCCCCCcc-cHHHHHHHHHhhhCCCCCCC
Q 005221          395 FVEYVVNLKFDEEP-NYAKYISLFDGIVGPNPDIR  428 (708)
Q Consensus       395 l~~~~~~~~~~~rP-~~~~l~~LL~~mL~~dP~~R  428 (708)
                      ++..|+..++.+|| +..++.+.|+.++......+
T Consensus       268 li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~~~~~~  302 (309)
T 2h34_A          268 VIARGMAKNPEDRYVTCGDLSAAAHAALATADQDR  302 (309)
T ss_dssp             HHHHHTCSSGGGSCSSHHHHHHHHHHTCC------
T ss_pred             HHHHhccCCHHHHHHhHHHHHHHHHHHHHhhcccc
Confidence            89999999999999 88999999999888754433


No 341
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=53.63  E-value=13  Score=42.44  Aligned_cols=10  Identities=0%  Similarity=0.122  Sum_probs=4.6

Q ss_pred             HHHHHHHHhh
Q 005221          411 AKYISLFDGI  420 (708)
Q Consensus       411 ~~l~~LL~~m  420 (708)
                      .++...+...
T Consensus       579 ~~~~~~i~~~  588 (635)
T 4fl3_A          579 SEVTAMLEKG  588 (635)
T ss_dssp             HHHHHHHHTT
T ss_pred             HHHHHHHHcC
Confidence            4445544443


No 342
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=53.08  E-value=9.4  Score=43.69  Aligned_cols=9  Identities=11%  Similarity=-0.330  Sum_probs=4.3

Q ss_pred             chHHHHhHH
Q 005221          431 STEGAQKLI  439 (708)
Q Consensus       431 ~~e~l~h~~  439 (708)
                      ..+++...|
T Consensus       621 l~~li~~~l  629 (656)
T 2j0j_A          621 LYSLMTKCW  629 (656)
T ss_dssp             HHHHHHHHT
T ss_pred             HHHHHHHHc
Confidence            344555544


No 343
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=52.28  E-value=6.1  Score=43.93  Aligned_cols=28  Identities=18%  Similarity=0.062  Sum_probs=25.6

Q ss_pred             HHHHHHHHhhhCCCCCCCCcchHHHHhH
Q 005221          411 AKYISLFDGIVGPNPDIRPISTEGAQKL  438 (708)
Q Consensus       411 ~~l~~LL~~mL~~dP~~Rps~~e~l~h~  438 (708)
                      ..+.+||.+||..||++|||+.++++.+
T Consensus       491 ~~l~~li~~cl~~dP~~RPt~~~l~~~L  518 (535)
T 2h8h_A          491 ESLHDLMCQCWRKEPEERPTFEYLQAFL  518 (535)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             HHHHHHHHHHcCCChhHCcCHHHHHHHH
Confidence            5789999999999999999999998764


No 344
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=49.80  E-value=83  Score=30.50  Aligned_cols=106  Identities=14%  Similarity=0.117  Sum_probs=72.3

Q ss_pred             eeeCCEEEEEEecC-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHH-HHHhCCceecCCCCCcEEeCCCCCCCCCcEEE
Q 005221          216 GRQGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILE-KMHSKGYVHGDVKPENFLLGPPGTPDEKKLFL  293 (708)
Q Consensus       216 ~~~~~~~~lvme~~-ggsL~~~l~~~~~~l~~~~~~~i~~qil~aL~-yLH~~gIvHrDIKP~NILl~~~g~~~~~~vkL  293 (708)
                      ....+.+.+.++.- ++--+..+.    .++....++++.+|+.... ++  ..-+|-=|.|+||+++.++     .++|
T Consensus        57 ~~~eD~~~i~y~~~~~~~~f~~i~----~~~~~eKlrll~nl~~L~~~~~--~~r~tf~l~P~NL~f~~~~-----~p~i  125 (219)
T 4ano_A           57 DVSEDEVKVVIKPPSSFLTFAAIR----KTTLLSRIRAAIHLVSKVKHHS--ARRLIFIVCPENLMFNRAL-----EPFF  125 (219)
T ss_dssp             EECSSEEEEEEECCTTCEEHHHHH----TSCHHHHHHHHHHHHHHHSSCC--SSSEECCCCGGGEEECTTC-----CEEE
T ss_pred             EEeCCEEEEEEEcCcccCcHHHHH----hcCHHHHHHHHHHHHHHHHHhh--hCceeEEEeCceEEEeCCC-----cEEE
Confidence            36677777777776 443344442    4888889998888877655 33  4557888999999999888     4888


Q ss_pred             eccCccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Q 005221          294 VDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQG  362 (708)
Q Consensus       294 ~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eLltG~~Pf~~  362 (708)
                      .-.|+-..                         ++|.-     .+...=+-..=|++..++.++..|..
T Consensus       126 ~hRGi~~~-------------------------lpP~e-----~~ee~fl~qyKali~all~~K~~Fe~  164 (219)
T 4ano_A          126 LHVGVKES-------------------------LPPDE-----WDDERLLREVKATVLALTEGEYRFDE  164 (219)
T ss_dssp             SCCEETTT-------------------------BSSCS-----CCHHHHHHHHHHHHHHHTTCSSCHHH
T ss_pred             EEcCCccc-------------------------CCCCC-----CCHHHHHHHHHHHHHHHHcCCCCHHH
Confidence            87666432                         22221     22233355778899999998888764


No 345
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=47.84  E-value=49  Score=32.08  Aligned_cols=124  Identities=9%  Similarity=0.012  Sum_probs=78.3

Q ss_pred             HHHHHHHHcCCCCCccEEEEEeeeCCEEEEEEecCC-CCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCC
Q 005221          195 YEWQVYNTLGGSHGVPRVHFKGRQGDYYVMVMDMLG-PSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDV  273 (708)
Q Consensus       195 ~Ei~il~~L~h~~~v~~~~~~~~~~~~~~lvme~~g-gsL~~~l~~~~~~l~~~~~~~i~~qil~aL~yLH~~gIvHrDI  273 (708)
                      .|+.+|.. .+++.++.  ......+.+.+.++.-. +--+..+    +.++....++++.+|+....+++  .=+|-=|
T Consensus        35 ~el~LL~~-~~~~Fl~~--~I~e~eD~v~~~y~~~~~~~~f~~i----k~~~~~eKlr~l~ni~~l~~~~~--~r~tf~L  105 (215)
T 4ann_A           35 HLMYLLEQ-HSPYFIDA--ELTELRDSFQIHYDINDNHTPFDNI----KSFTKNEKLRYLLNIKNLEEVNR--TRYTFVL  105 (215)
T ss_dssp             GGGGGGGS-CCTTBCCE--EEEECSSEEEEEECCCTTSEEGGGG----GGSCHHHHHHHHHHGGGGGGGGG--SSEECCC
T ss_pred             HHHHHHhc-cCCcccce--EEEEcccEEEEEEEcCcccCCHHHH----HhcCHHHHHHHHHHHHHHHHHhc--CceEEEE
Confidence            34554443 23444433  34455666766666652 2222223    24788899999999988775444  3477889


Q ss_pred             CCCcEEeCCCCCCCCCcEEEeccCccccccCCCCCccccccCCCceeeccccccchhhhcCCCCCchhhHHHHHHHHHHH
Q 005221          274 KPENFLLGPPGTPDEKKLFLVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFL  353 (708)
Q Consensus       274 KP~NILl~~~g~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~s~~~DIwSlGviL~eL  353 (708)
                      .|+||+++.++     .+++.--|+-..+                         +|.     ..+...=+-..=|++..+
T Consensus       106 ~P~NL~f~~~~-----~p~i~~RGik~~l-------------------------~P~-----~~~ee~fL~qyKAliial  150 (215)
T 4ann_A          106 APDELFFTRDG-----LPIAKTRGLQNVV-------------------------DPL-----PVSEAEFLTRYKALVICA  150 (215)
T ss_dssp             SGGGEEECTTS-----CEEESCCEETTTB-------------------------SCC-----CCCHHHHHHHHHHHHHHH
T ss_pred             ecceEEEcCCC-----CEEEEEccCccCC-------------------------CCC-----CCCHHHHHHHHHHHHHHH
Confidence            99999999888     4888866664321                         111     123333456778999999


Q ss_pred             HhCCCCCCC
Q 005221          354 LRGRLPWQG  362 (708)
Q Consensus       354 ltG~~Pf~~  362 (708)
                      ++++..|..
T Consensus       151 l~~K~~Fe~  159 (215)
T 4ann_A          151 FNEKQSFDA  159 (215)
T ss_dssp             HCTTCCHHH
T ss_pred             HcCCCCHHH
Confidence            999998865


No 346
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=47.58  E-value=9  Score=39.16  Aligned_cols=26  Identities=4%  Similarity=-0.193  Sum_probs=18.5

Q ss_pred             HHHHHHHhhhCCCCCCCCcchHHHHh
Q 005221          412 KYISLFDGIVGPNPDIRPISTEGAQK  437 (708)
Q Consensus       412 ~l~~LL~~mL~~dP~~Rps~~e~l~h  437 (708)
                      .+.+|+..||..||.+||++.++++.
T Consensus       250 ~~~~li~~~l~~~p~~RP~~~~l~~~  275 (330)
T 2izr_A          250 EMATYLRYVRRLDFFEKPDYDYLRKL  275 (330)
T ss_dssp             HHHHHHHHHHHCCTTCCCCHHHHHHH
T ss_pred             HHHHHHHHHHhCCCCCCCCHHHHHHH
Confidence            66777777777777777777766553


No 347
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=46.90  E-value=11  Score=41.23  Aligned_cols=27  Identities=15%  Similarity=0.028  Sum_probs=24.4

Q ss_pred             HHHHHHHHhhhCCCCCCCCcchHHHHh
Q 005221          411 AKYISLFDGIVGPNPDIRPISTEGAQK  437 (708)
Q Consensus       411 ~~l~~LL~~mL~~dP~~Rps~~e~l~h  437 (708)
                      .++.+||..||..||++||++.++++.
T Consensus       246 ~~l~~li~~cl~~dP~~RPs~~el~~~  272 (483)
T 3sv0_A          246 TEFASYFHYCRSLRFDDKPDYSYLKRL  272 (483)
T ss_dssp             HHHHHHHHHHHTCCTTCCCCHHHHHHH
T ss_pred             HHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence            579999999999999999999987664


No 348
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=46.62  E-value=19  Score=40.66  Aligned_cols=9  Identities=0%  Similarity=-0.429  Sum_probs=4.5

Q ss_pred             chHHHHhHH
Q 005221          431 STEGAQKLI  439 (708)
Q Consensus       431 ~~e~l~h~~  439 (708)
                      ..+++...|
T Consensus       568 l~~li~~cl  576 (613)
T 2ozo_A          568 LYALMSDCW  576 (613)
T ss_dssp             HHHHHHHTT
T ss_pred             HHHHHHHHc
Confidence            344555554


No 349
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=42.90  E-value=5.5  Score=41.66  Aligned_cols=41  Identities=5%  Similarity=-0.119  Sum_probs=32.7

Q ss_pred             HHHHHHHcCCCCCcccHHHHHHHHHhhhCCCCCCCCcchHHHHhHHHHh
Q 005221          394 QFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPISTEGAQKLIYQV  442 (708)
Q Consensus       394 ~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP~~Rps~~e~l~h~~f~~  442 (708)
                      +++..|+..+|.+||+..++++.|..+|..        ...|+|||+..
T Consensus       288 ~li~~~L~~dP~~R~sa~el~~~l~~~l~~--------~~~l~hPw~~~  328 (336)
T 4g3f_A          288 QAIQEGLRKEPVHRASAMELRRKVGKALQE--------VGGLKSPWKGE  328 (336)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHHHHH--------TTSSCSCSSSS
T ss_pred             HHHHHHccCCHhHCcCHHHHHHHHHHHHhh--------hhhccCCCcCC
Confidence            489999999999999999988888877753        23478999643


No 350
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=42.31  E-value=10  Score=38.42  Aligned_cols=38  Identities=8%  Similarity=0.029  Sum_probs=33.6

Q ss_pred             CCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCC
Q 005221          386 CFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGP  423 (708)
Q Consensus       386 ~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~  423 (708)
                      ..++..+.+++..|+..+|.+||++.++++.|+.++..
T Consensus       279 ~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~  316 (321)
T 2qkw_B          279 PESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRL  316 (321)
T ss_dssp             HHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhhc
Confidence            34567899999999999999999999999999988865


No 351
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=40.73  E-value=13  Score=37.84  Aligned_cols=36  Identities=3%  Similarity=-0.063  Sum_probs=32.1

Q ss_pred             CChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCC
Q 005221          388 CPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGP  423 (708)
Q Consensus       388 ~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~  423 (708)
                      ++..+.+++..|+..+|.+||++.++++.|+.++..
T Consensus       284 ~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~  319 (336)
T 3g2f_A          284 AVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMI  319 (336)
T ss_dssp             HHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             hHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHH
Confidence            345799999999999999999999999999988854


No 352
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=40.00  E-value=22  Score=34.87  Aligned_cols=30  Identities=10%  Similarity=0.201  Sum_probs=25.5

Q ss_pred             HHHHHHHcCCCCCcccHHHHHHHHHhhhCC
Q 005221          394 QFVEYVVNLKFDEEPNYAKYISLFDGIVGP  423 (708)
Q Consensus       394 ~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~  423 (708)
                      +++..|+..+|.+||+..++.+.|..+...
T Consensus       246 ~li~~~l~~dp~~Rps~~e~l~~l~~~~~~  275 (284)
T 2a19_B          246 TLLQKLLSKKPEDRPNTSEILRTLTVWKKS  275 (284)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHHTC-
T ss_pred             HHHHHHccCChhhCcCHHHHHHHHHHHhhC
Confidence            588999999999999999999888876543


No 353
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=38.05  E-value=18  Score=36.13  Aligned_cols=35  Identities=11%  Similarity=0.161  Sum_probs=31.1

Q ss_pred             CCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhh
Q 005221          387 FCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIV  421 (708)
Q Consensus       387 ~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL  421 (708)
                      .++..+.+++..|+..+|..||++.++.+.|+.+.
T Consensus       271 ~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~  305 (307)
T 2nru_A          271 TSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMT  305 (307)
T ss_dssp             HHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHh
Confidence            35677899999999999999999999999998874


No 354
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=37.40  E-value=11  Score=37.48  Aligned_cols=37  Identities=0%  Similarity=-0.170  Sum_probs=31.8

Q ss_pred             CCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCC
Q 005221          387 FCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGP  423 (708)
Q Consensus       387 ~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~  423 (708)
                      .++..+.+++..|+..+|.+||++.++.+.|+.+...
T Consensus       262 ~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~~~  298 (303)
T 3gxj_A          262 EALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ  298 (303)
T ss_dssp             HHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-CCC
T ss_pred             hhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhhhh
Confidence            3456799999999999999999999999999988764


No 355
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=34.75  E-value=19  Score=36.59  Aligned_cols=35  Identities=6%  Similarity=-0.146  Sum_probs=30.3

Q ss_pred             CChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhC
Q 005221          388 CPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVG  422 (708)
Q Consensus       388 ~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~  422 (708)
                      ++..+.+++..|+..+|.+||++.++.+.|+.+.+
T Consensus       284 ~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~  318 (322)
T 3soc_A          284 GMAMLCETIEECWDHDAEARLSAGCVGERITQMQR  318 (322)
T ss_dssp             HHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence            34569999999999999999999999998887753


No 356
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=31.75  E-value=20  Score=35.48  Aligned_cols=34  Identities=12%  Similarity=0.383  Sum_probs=28.0

Q ss_pred             HHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCCC
Q 005221          392 FRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNP  425 (708)
Q Consensus       392 ~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~dP  425 (708)
                      +.+++..|+..++.+||++.++++.|+.++...-
T Consensus       245 l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p~~  278 (289)
T 4fvq_A          245 LANLINNCMDYEPDHRPSFRAIIRDLNSLFTPDL  278 (289)
T ss_dssp             THHHHHHHSCSSGGGSCCHHHHHHHHHTCC----
T ss_pred             HHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCCC
Confidence            4679999999999999999999999999998643


No 357
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=31.14  E-value=19  Score=36.64  Aligned_cols=37  Identities=0%  Similarity=-0.170  Sum_probs=32.6

Q ss_pred             CCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCC
Q 005221          387 FCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGP  423 (708)
Q Consensus       387 ~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~  423 (708)
                      .++..+.+++..|+..+|.+||++.++.+.|+.+...
T Consensus       301 ~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~~  337 (342)
T 1b6c_B          301 EALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ  337 (342)
T ss_dssp             HHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred             hHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHH
Confidence            3567799999999999999999999999999988654


No 358
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=30.47  E-value=26  Score=34.18  Aligned_cols=33  Identities=9%  Similarity=0.156  Sum_probs=28.1

Q ss_pred             HHHHHHHHHcCCCCCcccHHHHHHHHHhhhCCC
Q 005221          392 FRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPN  424 (708)
Q Consensus       392 ~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~d  424 (708)
                      +.+++..|+..+|.+||++.++++.|+.+...+
T Consensus       234 l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~~  266 (268)
T 3sxs_A          234 IYQIMYSCWHELPEKRPTFQQLLSSIEPLREKD  266 (268)
T ss_dssp             HHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC--
T ss_pred             HHHHHHHHcCCChhhCcCHHHHHHHHHHhhhcc
Confidence            567999999999999999999999999887653


No 359
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=30.44  E-value=28  Score=34.79  Aligned_cols=30  Identities=10%  Similarity=0.132  Sum_probs=27.0

Q ss_pred             HHHHHHHcCCCCCcccHHHHHHHHHhhhCC
Q 005221          394 QFVEYVVNLKFDEEPNYAKYISLFDGIVGP  423 (708)
Q Consensus       394 ~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~  423 (708)
                      +++..|+..+|.+||++.++.+.|+.++..
T Consensus       283 ~li~~~l~~dp~~Rps~~~l~~~l~~~~~~  312 (314)
T 2ivs_A          283 RLMLQCWKQEPDKRPVFADISKDLEKMMVK  312 (314)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred             HHHHHHccCChhhCcCHHHHHHHHHHHHhh
Confidence            488999999999999999999999988763


No 360
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=29.67  E-value=26  Score=34.59  Aligned_cols=29  Identities=7%  Similarity=0.135  Sum_probs=26.0

Q ss_pred             HHHHHHHcCCCCCcccHHHHHHHHHhhhC
Q 005221          394 QFVEYVVNLKFDEEPNYAKYISLFDGIVG  422 (708)
Q Consensus       394 ~l~~~~~~~~~~~rP~~~~l~~LL~~mL~  422 (708)
                      +++..|+..++.+||++.++.+.|..++.
T Consensus       244 ~li~~~l~~~p~~Rps~~~l~~~l~~~~~  272 (287)
T 1u59_A          244 ALMSDCWIYKWEDRPDFLTVEQRMRACYY  272 (287)
T ss_dssp             HHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence            48899999999999999999999888864


No 361
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=29.53  E-value=27  Score=36.72  Aligned_cols=42  Identities=5%  Similarity=0.030  Sum_probs=35.7

Q ss_pred             CCccCCCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhhhCC
Q 005221          382 DGLCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGP  423 (708)
Q Consensus       382 ~~l~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~  423 (708)
                      ..++..++..+.+++..|+..+|.+||++.++.+.+..+|..
T Consensus       269 ~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~~  310 (396)
T 4eut_A          269 CSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHR  310 (396)
T ss_dssp             CSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHTC
T ss_pred             cccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhhc
Confidence            344556678899999999999999999999998888888875


No 362
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=29.18  E-value=27  Score=33.97  Aligned_cols=27  Identities=15%  Similarity=0.290  Sum_probs=23.4

Q ss_pred             HHHHHHHcCCCCCcccHHHHHHHHHhh
Q 005221          394 QFVEYVVNLKFDEEPNYAKYISLFDGI  420 (708)
Q Consensus       394 ~l~~~~~~~~~~~rP~~~~l~~LL~~m  420 (708)
                      +++..|+..+|.+||++.++.+.|+.+
T Consensus       245 ~li~~~l~~~p~~Rps~~e~l~~L~~l  271 (271)
T 3dtc_A          245 KLMEDCWNPDPHSRPSFTNILDQLTTI  271 (271)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred             HHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence            488999999999999999999888754


No 363
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=28.14  E-value=32  Score=33.76  Aligned_cols=30  Identities=3%  Similarity=0.209  Sum_probs=26.6

Q ss_pred             HHHHHHHcCCCCCcccHHHHHHHHHhhhCC
Q 005221          394 QFVEYVVNLKFDEEPNYAKYISLFDGIVGP  423 (708)
Q Consensus       394 ~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~  423 (708)
                      +++..|+..+|.+||++.++.+.|+.++..
T Consensus       245 ~li~~~l~~~p~~Rps~~ell~~L~~~~~~  274 (281)
T 3cc6_A          245 TLMTRCWDYDPSDRPRFTELVCSLSDVYQM  274 (281)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHccCCchhCcCHHHHHHHHHHHHHh
Confidence            488999999999999999999999888653


No 364
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=27.48  E-value=34  Score=33.13  Aligned_cols=31  Identities=10%  Similarity=0.252  Sum_probs=27.8

Q ss_pred             HHHHHHHHHcCCCCCcccHHHHHHHHHhhhC
Q 005221          392 FRQFVEYVVNLKFDEEPNYAKYISLFDGIVG  422 (708)
Q Consensus       392 ~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~  422 (708)
                      +.+++..|+..+|.+||++.++.+.|..+..
T Consensus       234 l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~  264 (267)
T 3t9t_A          234 VYQIMNHCWRERPEDRPAFSRLLRQLAEIAE  264 (267)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence            5679999999999999999999999988765


No 365
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=27.42  E-value=32  Score=34.71  Aligned_cols=34  Identities=12%  Similarity=0.093  Sum_probs=29.4

Q ss_pred             CCChHHHHHHHHHHcCCCCCcccHHHHHHHHHhh
Q 005221          387 FCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGI  420 (708)
Q Consensus       387 ~~p~~~~~l~~~~~~~~~~~rP~~~~l~~LL~~m  420 (708)
                      ..+..+.+++..|+..+|.+||++.++++.|+..
T Consensus       276 ~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~  309 (326)
T 3uim_A          276 EEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD  309 (326)
T ss_dssp             HHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCc
Confidence            3457789999999999999999999998888763


No 366
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=26.92  E-value=35  Score=33.22  Aligned_cols=31  Identities=10%  Similarity=0.252  Sum_probs=27.6

Q ss_pred             HHHHHHHHHcCCCCCcccHHHHHHHHHhhhC
Q 005221          392 FRQFVEYVVNLKFDEEPNYAKYISLFDGIVG  422 (708)
Q Consensus       392 ~~~l~~~~~~~~~~~rP~~~~l~~LL~~mL~  422 (708)
                      +.+++..|+..+|.+||++.++++.|..+..
T Consensus       236 ~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~  266 (269)
T 4hcu_A          236 VYQIMNHCWRERPEDRPAFSRLLRQLAEIAE  266 (269)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHccCCcccCcCHHHHHHHHHHHHH
Confidence            5679999999999999999999999888764


No 367
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=26.78  E-value=32  Score=34.66  Aligned_cols=30  Identities=10%  Similarity=0.199  Sum_probs=27.7

Q ss_pred             HHHHHHHcCCCCCcccHHHHHHHHHhhhCC
Q 005221          394 QFVEYVVNLKFDEEPNYAKYISLFDGIVGP  423 (708)
Q Consensus       394 ~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~  423 (708)
                      +++..|+..++.+||++.++.+.|+.++..
T Consensus       270 ~li~~~l~~dp~~Rps~~~l~~~l~~~l~~  299 (323)
T 3qup_A          270 DLMYQCWSADPKQRPSFTCLRMELENILGH  299 (323)
T ss_dssp             HHHHHTTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             HHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence            489999999999999999999999999875


No 368
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=26.40  E-value=36  Score=33.96  Aligned_cols=30  Identities=7%  Similarity=0.158  Sum_probs=26.9

Q ss_pred             HHHHHHHcCCCCCcccHHHHHHHHHhhhCC
Q 005221          394 QFVEYVVNLKFDEEPNYAKYISLFDGIVGP  423 (708)
Q Consensus       394 ~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~  423 (708)
                      +++..|+..++.+||++.++.+.|..+++.
T Consensus       282 ~li~~~l~~dp~~Rps~~ell~~L~~~~~~  311 (316)
T 2xir_A          282 QTMLDCWHGEPSQRPTFSELVEHLGNLLQA  311 (316)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHcCCChhhCcCHHHHHHHHHHHHhh
Confidence            478899999999999999999999988754


No 369
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=26.26  E-value=23  Score=36.29  Aligned_cols=30  Identities=7%  Similarity=0.158  Sum_probs=26.9

Q ss_pred             HHHHHHHcCCCCCcccHHHHHHHHHhhhCC
Q 005221          394 QFVEYVVNLKFDEEPNYAKYISLFDGIVGP  423 (708)
Q Consensus       394 ~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~  423 (708)
                      +++..|+..++.+||++.++.+.|..++..
T Consensus       327 ~li~~~l~~dP~~Rps~~ell~~L~~~~~~  356 (359)
T 3vhe_A          327 QTMLDCWHGEPSQRPTFSELVEHLGNLLQA  356 (359)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHccCChhhCCCHHHHHHHHHHHHHH
Confidence            478899999999999999999999988754


No 370
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=25.84  E-value=5.4  Score=43.67  Aligned_cols=59  Identities=5%  Similarity=-0.134  Sum_probs=13.9

Q ss_pred             EEEEeEeeeCceEEEEEEEeCCCCCcccCCCCccEEEE------EEeecC--CCCCCCCChHHHHHHHHcCCCCCccEEE
Q 005221          142 RLERKLGKGGFGQVYVGRRVSPVNANERTGPGAVEVAL------KFEHRS--SKGCNYGPPYEWQVYNTLGGSHGVPRVH  213 (708)
Q Consensus       142 ~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~VAl------K~~~~~--~~~~~~~~~~Ei~il~~L~h~~~v~~~~  213 (708)
                      .+.++||   ||.||+|....          ...+||+      |..+..  .......+.+|..+++.+.|+|++....
T Consensus       145 ~l~~~lG---fG~v~~g~~~~----------~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~  211 (463)
T 3cxl_A          145 PIYEHVG---YTTLNREPAYK----------KHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHN  211 (463)
T ss_dssp             CSTTTSS---BCCC-------------------CCBGGGC-----------------------------------CBCCC
T ss_pred             cccccCC---chhhhcccccc----------cCCchhhhhccCccccccccccccccccccccccccccccccccCCCcc
Confidence            3446776   99999998755          3456777      654432  1122335677888999999988655433


No 371
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=25.24  E-value=68  Score=32.74  Aligned_cols=31  Identities=13%  Similarity=0.189  Sum_probs=26.5

Q ss_pred             cCCCChHHHHHHHHHHcCCCCCcccHHHHHH
Q 005221          385 CCFCPAPFRQFVEYVVNLKFDEEPNYAKYIS  415 (708)
Q Consensus       385 ~~~~p~~~~~l~~~~~~~~~~~rP~~~~l~~  415 (708)
                      ...++..+.+|+..|+..+|.+||+..+++.
T Consensus       294 ~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  324 (360)
T 3eqc_A          294 SGVFSLEFQDFVNKCLIKNPAERADLKQLMV  324 (360)
T ss_dssp             TTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred             cccccHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence            3457889999999999999999999877643


No 372
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=24.83  E-value=37  Score=33.34  Aligned_cols=29  Identities=17%  Similarity=0.209  Sum_probs=25.8

Q ss_pred             HHHHHHHcCCCCCcccHHHHHHHHHhhhC
Q 005221          394 QFVEYVVNLKFDEEPNYAKYISLFDGIVG  422 (708)
Q Consensus       394 ~l~~~~~~~~~~~rP~~~~l~~LL~~mL~  422 (708)
                      +++..|+..++.+||++.++++.|..++.
T Consensus       252 ~li~~~l~~~p~~Rps~~~ll~~L~~~~~  280 (283)
T 3gen_A          252 TIMYSCWHEKADERPTFKILLSNILDVMD  280 (283)
T ss_dssp             HHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHccCChhHCcCHHHHHHHHHHHhh
Confidence            48899999999999999999998888764


No 373
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=24.80  E-value=43  Score=33.52  Aligned_cols=30  Identities=13%  Similarity=0.256  Sum_probs=26.8

Q ss_pred             HHHHHHHcCCCCCcccHHHHHHHHHhhhCC
Q 005221          394 QFVEYVVNLKFDEEPNYAKYISLFDGIVGP  423 (708)
Q Consensus       394 ~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~  423 (708)
                      +++..|+..++..||++.++++.|+.++..
T Consensus       271 ~li~~~l~~dp~~Rps~~e~l~~L~~~~~~  300 (322)
T 1p4o_A          271 ELMRMCWQYNPKMRPSFLEIISSIKEEMEP  300 (322)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHGGGSCT
T ss_pred             HHHHHHcCCCcccCcCHHHHHHHHHHhhcc
Confidence            488999999999999999999999888763


No 374
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=24.13  E-value=41  Score=33.90  Aligned_cols=30  Identities=13%  Similarity=0.239  Sum_probs=27.3

Q ss_pred             HHHHHHHcCCCCCcccHHHHHHHHHhhhCC
Q 005221          394 QFVEYVVNLKFDEEPNYAKYISLFDGIVGP  423 (708)
Q Consensus       394 ~l~~~~~~~~~~~rP~~~~l~~LL~~mL~~  423 (708)
                      +++..|+..++.+||++.++++.|..++..
T Consensus       272 ~li~~~l~~dp~~Rps~~ell~~L~~~~~~  301 (327)
T 1fvr_A          272 DLMRQCWREKPYERPSFAQILVSLNRMLEE  301 (327)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred             HHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence            489999999999999999999999988864


No 375
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=22.74  E-value=48  Score=33.52  Aligned_cols=29  Identities=14%  Similarity=0.239  Sum_probs=26.1

Q ss_pred             HHHHHHHcCCCCCcccHHHHHHHHHhhhC
Q 005221          394 QFVEYVVNLKFDEEPNYAKYISLFDGIVG  422 (708)
Q Consensus       394 ~l~~~~~~~~~~~rP~~~~l~~LL~~mL~  422 (708)
                      +++..|+..++.+||++.+++..|..++.
T Consensus       250 ~li~~~l~~~p~~Rps~~ell~~l~~~~~  278 (327)
T 3poz_A          250 MIMVKCWMIDADSRPKFRELIIEFSKMAR  278 (327)
T ss_dssp             HHHHHHTCSCGGGSCCHHHHHHHHHHHHT
T ss_pred             HHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence            37899999999999999999999988865


Done!