Query 005222
Match_columns 708
No_of_seqs 389 out of 3045
Neff 8.9
Searched_HMMs 29240
Date Mon Mar 25 19:04:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005222.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/005222hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3d2f_A Heat shock protein homo 100.0 3E-112 1E-116 974.9 71.9 651 1-703 2-655 (675)
2 4b9q_A Chaperone protein DNAK; 100.0 1.8E-99 6E-104 863.5 67.6 590 1-674 2-604 (605)
3 2kho_A Heat shock protein 70; 100.0 2.3E-98 8E-103 854.5 60.6 589 2-674 3-604 (605)
4 1yuw_A Heat shock cognate 71 k 100.0 1.2E-92 4E-97 800.2 50.3 542 2-615 5-553 (554)
5 2v7y_A Chaperone protein DNAK; 100.0 4.3E-82 1.5E-86 708.7 51.5 499 2-605 3-509 (509)
6 3i33_A Heat shock-related 70 k 100.0 3.8E-65 1.3E-69 558.0 43.5 380 1-382 23-403 (404)
7 3qfu_A 78 kDa glucose-regulate 100.0 1.6E-63 5.6E-68 543.5 43.4 374 3-381 20-394 (394)
8 4gni_A Putative heat shock pro 100.0 2E-63 6.7E-68 545.0 39.0 378 1-383 13-404 (409)
9 1dkg_D Molecular chaperone DNA 100.0 1.9E-61 6.4E-66 525.0 39.3 372 2-381 3-383 (383)
10 1jce_A ROD shape-determining p 100.0 4.2E-41 1.4E-45 359.5 22.3 309 2-381 4-327 (344)
11 4e81_A Chaperone protein DNAK; 100.0 1E-33 3.5E-38 277.5 24.9 212 389-674 1-216 (219)
12 1u00_A HSC66, chaperone protei 100.0 7.6E-32 2.6E-36 267.1 27.5 211 392-676 1-215 (227)
13 2fsj_A Hypothetical protein TA 100.0 8E-29 2.7E-33 263.2 12.9 227 112-378 95-343 (346)
14 2ych_A Competence protein PILM 99.9 1.9E-27 6.5E-32 257.0 14.8 306 3-367 15-341 (377)
15 3n8e_A Stress-70 protein, mito 99.9 9.8E-27 3.4E-31 220.1 15.1 160 387-615 18-181 (182)
16 3h1q_A Ethanolamine utilizatio 99.9 9E-26 3.1E-30 232.5 19.7 202 116-377 71-272 (272)
17 1k8k_A ARP3, actin-like protei 99.9 2.6E-25 8.9E-30 243.4 16.8 227 137-379 107-387 (418)
18 2fxu_A Alpha-actin-1, actin, a 99.9 9.5E-25 3.2E-29 235.1 17.3 213 138-378 101-348 (375)
19 4a2a_A Cell division protein F 99.9 2E-24 6.9E-29 234.2 17.3 199 151-380 168-394 (419)
20 3h0x_A 78 kDa glucose-regulate 99.9 1.1E-23 3.9E-28 194.2 15.2 147 391-605 2-152 (152)
21 3dob_A Heat shock 70 kDa prote 99.9 1.2E-23 3.9E-28 193.7 13.3 147 391-605 2-152 (152)
22 3dqg_A Heat shock 70 kDa prote 99.9 2E-23 7E-28 191.8 11.5 146 391-605 2-151 (151)
23 2zgy_A Plasmid segregation pro 99.9 7.7E-23 2.6E-27 215.4 12.5 227 110-377 72-319 (320)
24 2op6_A Heat shock 70 kDa prote 99.9 4E-22 1.4E-26 185.1 14.8 147 391-605 2-152 (152)
25 1k8k_B ARP2, actin-like protei 99.8 2E-20 6.7E-25 202.4 4.6 214 138-379 105-364 (394)
26 4ehu_A Activator of 2-hydroxyi 99.8 1.1E-18 3.7E-23 179.8 14.0 186 162-381 68-256 (276)
27 3js6_A Uncharacterized PARM pr 99.7 4.4E-17 1.5E-21 172.8 13.1 208 138-382 114-339 (355)
28 1q5l_A Chaperone protein DNAK; 99.6 1.1E-15 3.7E-20 137.8 11.8 101 386-495 14-118 (135)
29 4apw_A ALP12; actin-like prote 99.6 3.6E-16 1.2E-20 164.5 5.7 203 138-379 106-324 (329)
30 3dwl_A Actin-related protein 3 99.5 1.1E-13 3.8E-18 150.0 11.4 223 138-378 124-395 (427)
31 3qb0_A Actin-related protein 4 99.5 4.5E-13 1.5E-17 146.6 14.9 178 2-244 24-209 (498)
32 3lof_A Heat shock 70 kDa prote 99.3 1.9E-11 6.6E-16 106.8 11.2 82 593-675 3-85 (113)
33 4fo0_A Actin-related protein 8 99.2 3.8E-10 1.3E-14 128.7 21.3 108 124-244 179-293 (593)
34 2d0o_A DIOL dehydratase-reacti 99.2 1.8E-11 6.3E-16 130.4 7.3 196 151-379 368-604 (610)
35 1nbw_A Glycerol dehydratase re 99.1 4.1E-11 1.4E-15 128.3 7.2 194 152-378 371-605 (607)
36 2p32_A Heat shock 70 kDa prote 99.0 4.5E-10 1.5E-14 99.0 6.9 80 594-674 13-93 (120)
37 1ud0_A HSC70, 70 kDa heat-shoc 98.9 9.9E-10 3.4E-14 96.0 5.6 77 597-674 2-79 (113)
38 1hux_A Activator of (R)-2-hydr 98.8 2.8E-07 9.5E-12 93.6 20.0 71 306-380 187-257 (270)
39 2ews_A Pantothenate kinase; PA 98.1 0.00028 9.4E-09 71.4 20.4 75 298-377 207-286 (287)
40 4am6_A Actin-like protein ARP8 97.9 3.1E-05 1.1E-09 85.7 11.2 123 138-278 222-346 (655)
41 2ivn_A O-sialoglycoprotein end 96.8 0.085 2.9E-06 54.6 20.4 64 312-380 230-299 (330)
42 2i7n_A Pantothenate kinase 1; 96.8 0.02 6.9E-07 59.4 15.2 46 332-377 306-358 (360)
43 1t6c_A Exopolyphosphatase; alp 96.6 0.01 3.5E-07 61.0 11.6 78 153-238 100-177 (315)
44 3l0q_A Xylulose kinase; xlylul 96.4 0.0044 1.5E-07 69.4 7.4 87 297-384 408-494 (554)
45 3i8b_A Xylulose kinase; strain 96.2 0.0066 2.3E-07 67.2 7.7 79 299-382 395-474 (515)
46 2itm_A Xylulose kinase, xylulo 96.1 0.0054 1.9E-07 67.5 6.3 53 331-383 386-438 (484)
47 3hz6_A Xylulokinase; xylulose, 96.1 0.0073 2.5E-07 66.8 7.4 80 299-384 375-455 (511)
48 4bc3_A Xylulose kinase; transf 96.1 0.0075 2.6E-07 67.2 7.3 76 305-381 408-483 (538)
49 2zf5_O Glycerol kinase; hypert 96.0 0.0089 3E-07 66.0 7.5 80 299-383 365-444 (497)
50 3ifr_A Carbohydrate kinase, FG 96.0 0.011 3.8E-07 65.4 8.0 81 299-384 371-452 (508)
51 3ll3_A Gluconate kinase; xylul 95.9 0.012 4.1E-07 65.0 7.7 53 331-384 393-445 (504)
52 3ezw_A Glycerol kinase; glycer 95.9 0.01 3.5E-07 65.9 7.1 83 298-384 371-454 (526)
53 3g25_A Glycerol kinase; IDP007 95.9 0.013 4.3E-07 64.8 7.9 81 299-384 374-456 (501)
54 3vov_A Glucokinase, hexokinase 95.9 0.46 1.6E-05 48.3 19.1 44 163-211 98-141 (302)
55 3h3n_X Glycerol kinase; ATP-bi 95.8 0.015 5E-07 64.3 8.1 81 299-384 373-455 (506)
56 3vgl_A Glucokinase; ROK family 95.8 0.49 1.7E-05 48.5 19.1 45 163-212 96-140 (321)
57 3mdq_A Exopolyphosphatase; str 95.6 0.046 1.6E-06 56.2 10.2 79 153-238 92-170 (315)
58 3jvp_A Ribulokinase; PSI-II, N 95.6 0.0099 3.4E-07 66.7 5.6 79 299-382 410-490 (572)
59 2p3r_A Glycerol kinase; glycer 95.6 0.017 5.7E-07 63.9 7.2 80 299-383 371-452 (510)
60 2ch5_A NAGK protein; transfera 95.6 2.6 8.8E-05 43.4 24.7 46 136-181 70-118 (347)
61 4e1j_A Glycerol kinase; struct 95.5 0.016 5.3E-07 64.3 6.7 53 331-384 425-477 (520)
62 2e2o_A Hexokinase; acetate and 95.5 2.4 8.4E-05 42.6 25.4 48 331-379 239-287 (299)
63 4db3_A Glcnac kinase, N-acetyl 95.4 1 3.6E-05 46.2 19.8 47 331-377 269-324 (327)
64 2dpn_A Glycerol kinase; thermu 95.3 0.021 7.2E-07 62.9 7.0 51 331-382 398-448 (495)
65 2d4w_A Glycerol kinase; alpha 95.3 0.028 9.4E-07 62.1 7.9 81 299-383 373-454 (504)
66 2w40_A Glycerol kinase, putati 95.2 0.034 1.2E-06 61.3 8.1 81 299-383 376-458 (503)
67 4htl_A Beta-glucoside kinase; 95.1 0.64 2.2E-05 47.1 17.1 49 331-379 237-291 (297)
68 2uyt_A Rhamnulokinase; rhamnos 95.1 0.034 1.2E-06 61.1 7.6 78 297-380 361-440 (489)
69 3eno_A Putative O-sialoglycopr 94.5 1.4 4.8E-05 45.4 17.7 68 310-382 233-306 (334)
70 3r8e_A Hypothetical sugar kina 94.4 0.8 2.7E-05 47.0 15.7 48 331-378 260-318 (321)
71 3h6e_A Carbohydrate kinase, FG 92.1 0.12 3.9E-06 56.6 5.0 71 305-380 363-436 (482)
72 1z6r_A MLC protein; transcript 91.3 5.9 0.0002 41.8 17.3 44 163-211 186-229 (406)
73 3en9_A Glycoprotease, O-sialog 91.1 19 0.00066 39.4 21.9 60 310-374 232-297 (540)
74 3cer_A Possible exopolyphospha 89.7 1 3.5E-05 46.6 9.2 80 154-238 106-191 (343)
75 1u6z_A Exopolyphosphatase; alp 87.5 1.2 4E-05 48.9 8.4 76 154-238 100-176 (513)
76 1zc6_A Probable N-acetylglucos 85.0 33 0.0011 34.2 24.6 63 307-378 228-292 (305)
77 1iv0_A Hypothetical protein; r 84.4 0.66 2.3E-05 38.3 3.3 21 1-21 1-21 (98)
78 3hi0_A Putative exopolyphospha 83.2 2.3 7.7E-05 46.6 7.9 75 153-237 103-178 (508)
79 3o8m_A Hexokinase; rnaseh-like 79.3 21 0.00071 38.5 13.5 58 149-213 184-243 (485)
80 1vhx_A Putative holliday junct 78.1 1.2 4E-05 40.0 2.9 21 1-21 3-23 (150)
81 4g9i_A Hydrogenase maturation 75.4 6.1 0.00021 45.3 8.5 62 315-381 694-761 (772)
82 2ap1_A Putative regulator prot 75.2 27 0.00092 35.3 12.8 44 163-211 120-163 (327)
83 3aap_A Ectonucleoside triphosp 73.3 2.9 0.0001 43.3 4.8 19 193-211 139-157 (353)
84 2yhx_A Hexokinase B; transfera 72.5 3.7 0.00013 44.1 5.5 56 151-213 164-221 (457)
85 3qbx_A Anhydro-N-acetylmuramic 71.7 7.4 0.00025 40.2 7.2 69 306-379 261-336 (371)
86 3cqy_A Anhydro-N-acetylmuramic 70.7 6.1 0.00021 40.8 6.3 69 305-379 267-342 (370)
87 3ttc_A HYPF, transcriptional r 70.5 5.6 0.00019 44.6 6.4 49 331-379 599-651 (657)
88 1hjr_A Holliday junction resol 67.9 5.1 0.00018 36.1 4.5 19 1-19 1-19 (158)
89 3vth_A Hydrogenase maturation 66.9 7.4 0.00025 44.5 6.6 61 315-380 682-748 (761)
90 1nbw_A Glycerol dehydratase re 64.3 27 0.00092 38.0 9.8 44 138-181 131-175 (607)
91 4ep4_A Crossover junction endo 63.9 4.8 0.00016 36.6 3.5 19 1-19 1-19 (166)
92 1nu0_A Hypothetical protein YQ 63.2 5.3 0.00018 35.1 3.6 21 2-22 4-24 (138)
93 2e1z_A Propionate kinase; TDCD 62.3 83 0.0028 32.8 12.9 43 309-355 312-355 (415)
94 3cj1_A Ectonucleoside triphosp 61.2 8.9 0.00031 41.1 5.6 20 193-212 189-208 (456)
95 3ven_A O-carbamoyltransferase 61.2 11 0.00039 41.4 6.5 65 313-382 294-360 (576)
96 1z05_A Transcriptional regulat 60.8 65 0.0022 33.9 12.5 127 3-211 110-251 (429)
97 2d0o_A DIOL dehydratase-reacti 60.5 36 0.0012 36.9 9.9 46 136-181 127-173 (610)
98 3djc_A Type III pantothenate k 56.7 6.7 0.00023 38.7 3.4 21 2-22 3-23 (266)
99 2w40_A Glycerol kinase, putati 56.3 6.6 0.00023 42.8 3.6 20 2-21 5-24 (503)
100 3ll3_A Gluconate kinase; xylul 54.6 7.6 0.00026 42.3 3.8 20 2-21 5-24 (504)
101 1bdg_A Hexokinase; phosphotran 54.5 27 0.00093 37.2 8.0 62 144-212 166-229 (451)
102 2dpn_A Glycerol kinase; thermu 54.5 6.3 0.00021 42.9 3.1 20 2-21 3-22 (495)
103 3ezw_A Glycerol kinase; glycer 52.1 8.2 0.00028 42.3 3.5 19 2-20 5-23 (526)
104 2p3r_A Glycerol kinase; glycer 52.0 9 0.00031 41.8 3.8 19 2-20 4-22 (510)
105 3l0q_A Xylulose kinase; xlylul 52.0 9.6 0.00033 42.1 4.1 20 2-21 6-25 (554)
106 3g25_A Glycerol kinase; IDP007 51.1 8.4 0.00029 42.0 3.4 20 2-21 7-26 (501)
107 2zf5_O Glycerol kinase; hypert 50.4 8.7 0.0003 41.7 3.4 19 2-20 4-22 (497)
108 3nmd_A CGMP dependent protein 50.2 47 0.0016 25.2 6.3 46 578-624 26-71 (72)
109 3ifr_A Carbohydrate kinase, FG 49.8 11 0.00037 41.2 4.0 21 2-22 8-28 (508)
110 3h3n_X Glycerol kinase; ATP-bi 49.5 10 0.00035 41.3 3.8 20 2-21 6-25 (506)
111 3h6e_A Carbohydrate kinase, FG 49.3 7.3 0.00025 42.2 2.5 20 2-21 7-26 (482)
112 3i8b_A Xylulose kinase; strain 49.2 9.7 0.00033 41.6 3.5 18 2-19 6-23 (515)
113 3hz6_A Xylulokinase; xylulose, 49.0 10 0.00035 41.4 3.7 20 2-21 6-25 (511)
114 2uyt_A Rhamnulokinase; rhamnos 48.2 7.4 0.00025 42.2 2.4 18 2-19 5-22 (489)
115 4bc3_A Xylulose kinase; transf 48.1 11 0.00038 41.4 3.8 20 2-21 11-30 (538)
116 3jvp_A Ribulokinase; PSI-II, N 47.3 11 0.00036 41.9 3.5 19 2-20 6-24 (572)
117 2odv_A Plectin 1, HD1; plakin 47.3 1.5E+02 0.0052 28.2 11.3 94 572-678 41-143 (235)
118 3hm8_A Hexokinase-3; glucose, 46.8 2E+02 0.007 30.3 13.0 57 149-212 159-218 (445)
119 4e1j_A Glycerol kinase; struct 46.4 12 0.00043 40.8 3.8 20 2-21 27-46 (520)
120 2gup_A ROK family protein; sug 45.8 54 0.0018 32.3 8.3 42 163-211 94-135 (292)
121 2qm1_A Glucokinase; alpha-beta 44.7 39 0.0013 33.9 7.1 48 332-379 263-321 (326)
122 3zx3_A Ectonucleoside triphosp 44.1 23 0.00079 37.7 5.3 44 167-212 151-199 (452)
123 2itm_A Xylulose kinase, xylulo 43.0 14 0.00047 40.0 3.5 18 3-20 2-19 (484)
124 3o8m_A Hexokinase; rnaseh-like 42.8 70 0.0024 34.3 8.9 30 192-221 78-108 (485)
125 3bex_A Type III pantothenate k 42.7 14 0.00049 36.0 3.2 22 1-22 3-24 (249)
126 2d4w_A Glycerol kinase; alpha 41.4 13 0.00046 40.3 3.1 20 2-21 3-22 (504)
127 2wl8_A Peroxisomal biogenesis 40.9 51 0.0017 28.2 5.9 45 629-674 33-77 (126)
128 3f9m_A Glucokinase; hexokinase 40.6 2.9E+02 0.01 29.3 13.2 57 149-212 183-242 (470)
129 3cet_A Conserved archaeal prot 40.2 17 0.00059 36.8 3.4 68 299-376 244-321 (334)
130 2yhx_A Hexokinase B; transfera 39.7 1.1E+02 0.0038 32.5 9.9 53 192-244 59-117 (457)
131 3f9m_A Glucokinase; hexokinase 39.5 76 0.0026 33.9 8.4 52 192-246 75-135 (470)
132 1hnj_A Beta-ketoacyl-acyl carr 39.3 31 0.001 34.6 5.2 48 308-358 214-261 (317)
133 2gup_A ROK family protein; sug 38.3 16 0.00056 36.2 3.0 49 331-379 227-287 (292)
134 2aa4_A Mannac kinase, putative 37.4 29 0.00099 34.3 4.6 46 332-377 234-286 (289)
135 2a01_A Apolipoprotein A-I; fou 35.8 90 0.0031 30.0 7.7 83 591-674 128-216 (243)
136 2aa4_A Mannac kinase, putative 35.4 21 0.00072 35.3 3.2 43 163-211 96-138 (289)
137 1zbs_A Hypothetical protein PG 34.9 23 0.00079 35.2 3.4 67 306-379 211-280 (291)
138 3htv_A D-allose kinase, alloki 34.5 72 0.0025 31.8 7.1 48 331-378 239-298 (310)
139 3khy_A Propionate kinase; csgi 34.1 1.3E+02 0.0044 31.0 8.7 25 331-355 313-338 (384)
140 1ub7_A 3-oxoacyl-[acyl-carrier 32.6 40 0.0014 33.8 4.9 47 309-358 217-263 (322)
141 1woq_A Inorganic polyphosphate 32.5 32 0.0011 33.6 3.9 45 163-211 114-158 (267)
142 2ebd_A 3-oxoacyl-[acyl-carrier 32.1 45 0.0015 33.2 5.1 45 310-357 208-252 (309)
143 1saz_A Probable butyrate kinas 31.9 27 0.00093 36.3 3.5 48 331-378 295-347 (381)
144 3hm8_A Hexokinase-3; glucose, 31.8 1.5E+02 0.0051 31.3 9.1 34 192-226 57-90 (445)
145 2h3g_X Biosynthetic protein; p 31.7 29 0.00099 34.2 3.4 20 3-22 2-21 (268)
146 1zbs_A Hypothetical protein PG 31.6 11 0.00037 37.7 0.2 45 136-181 59-105 (291)
147 3epq_A Putative fructokinase; 30.6 28 0.00097 34.8 3.2 51 153-211 90-140 (302)
148 1zxo_A Conserved hypothetical 30.0 22 0.00077 35.3 2.4 68 307-378 210-277 (291)
149 2dfs_A Myosin-5A; myosin-V, in 29.8 5.1E+02 0.017 30.8 14.2 15 150-164 171-185 (1080)
150 4am6_A Actin-like protein ARP8 29.4 25 0.00087 39.0 2.8 25 332-356 501-525 (655)
151 3epq_A Putative fructokinase; 28.4 96 0.0033 30.8 6.8 21 1-21 3-23 (302)
152 1msz_A DNA-binding protein smu 28.2 37 0.0013 26.9 2.7 28 140-167 34-61 (86)
153 2f9w_A Pantothenate kinase; CO 28.0 42 0.0014 33.0 3.8 21 2-22 24-45 (271)
154 1zow_A 3-oxoacyl-[acyl-carrier 27.9 60 0.0021 32.3 5.2 47 309-358 209-255 (313)
155 2x3e_A 3-oxoacyl-[acyl-carrier 27.5 63 0.0021 32.6 5.3 46 310-358 222-267 (331)
156 2hoe_A N-acetylglucosamine kin 27.2 95 0.0032 32.0 6.7 72 301-377 289-369 (380)
157 1saz_A Probable butyrate kinas 27.1 47 0.0016 34.5 4.3 20 2-21 3-22 (381)
158 3bex_A Type III pantothenate k 26.9 1.6E+02 0.0056 28.2 7.9 61 136-206 56-134 (249)
159 3lay_A Zinc resistance-associa 26.7 3.6E+02 0.012 24.4 10.2 66 570-644 66-131 (175)
160 1zxo_A Conserved hypothetical 26.6 6.5 0.00022 39.3 -2.4 44 137-181 58-103 (291)
161 1kae_A HDH, histidinol dehydro 26.5 83 0.0028 32.9 5.8 44 137-184 154-198 (434)
162 1mzj_A Beta-ketoacylsynthase I 25.9 61 0.0021 32.8 4.9 46 310-358 229-274 (339)
163 1gs9_A Apolipoprotein E, APOE4 25.2 2.9E+02 0.0098 24.7 8.6 62 570-638 83-144 (165)
164 3uul_A Utrophin; spectrin repe 24.7 2.8E+02 0.0094 22.4 8.2 20 597-616 7-26 (118)
165 3zyy_X Iron-sulfur cluster bin 24.4 1E+02 0.0034 34.3 6.4 57 295-352 499-555 (631)
166 2yhw_A Bifunctional UDP-N-acet 23.8 42 0.0014 34.1 3.1 44 163-211 131-174 (343)
167 1g99_A Acetate kinase; alpha/b 23.0 47 0.0016 34.7 3.2 45 307-355 302-347 (408)
168 1bdg_A Hexokinase; phosphotran 22.9 2.4E+02 0.0082 29.8 8.9 24 192-215 66-89 (451)
169 4dfe_A 3-oxoacyl-[acyl-carrier 22.4 88 0.003 31.5 5.2 48 308-358 230-277 (333)
170 2q2r_A Glucokinase 1, putative 22.1 50 0.0017 34.0 3.3 20 1-20 29-48 (373)
171 3zyy_X Iron-sulfur cluster bin 21.4 2.5E+02 0.0085 31.1 8.8 41 307-347 265-305 (631)
172 3cer_A Possible exopolyphospha 21.4 4.1E+02 0.014 26.7 10.1 69 192-277 14-84 (343)
173 1u6e_A 3-oxoacyl-[acyl-carrier 21.3 90 0.0031 31.3 5.1 45 310-357 230-274 (335)
174 3nuw_A 2-OXO-3-deoxygalactonat 21.3 64 0.0022 32.1 3.7 44 333-378 248-291 (295)
175 4ewp_A 3-oxoacyl-[acyl-carrier 21.2 1.3E+02 0.0046 30.3 6.4 45 314-358 66-112 (350)
176 4gic_A HDH, histidinol dehydro 21.1 89 0.0031 32.6 4.8 75 137-212 160-249 (423)
177 1gmj_A ATPase inhibitor; coile 20.7 3E+02 0.01 21.6 6.5 24 669-692 54-77 (84)
178 3nmd_A CGMP dependent protein 20.5 2.1E+02 0.0072 21.7 5.5 42 653-694 27-68 (72)
179 3htv_A D-allose kinase, alloki 20.5 61 0.0021 32.4 3.5 20 2-21 8-27 (310)
180 2yhw_A Bifunctional UDP-N-acet 20.3 1.7E+02 0.0057 29.5 6.9 20 2-21 31-50 (343)
No 1
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=100.00 E-value=2.8e-112 Score=974.91 Aligned_cols=651 Identities=36% Similarity=0.605 Sum_probs=587.8
Q ss_pred CeEEEEEccccceEEEEEeCCceEEEeCCCCCccceEEEEEcCCcEEEcHHHHHhHhcCCcchHHHHHHhhCCCCCChHH
Q 005222 1 MSVVGFDIGNENCVIATVKHRGVDVLLNEESNRETPSIVCFGEKQRFIGAAGYASAMMHPKSTVSQVKRLIGRRYGDPVV 80 (708)
Q Consensus 1 M~vvGID~GTt~s~va~~~~~~~~ii~~~~g~r~~Ps~v~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~llg~~~~~~~v 80 (708)
|++||||||||||+||++.+++++++.|+.|+|.+||+|+|.+++++||..|..+...+|.++++++|||||+.++++.+
T Consensus 2 m~~iGIDlGTtns~va~~~~g~~~ii~n~~g~r~tPS~Vaf~~~~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~~d~~v 81 (675)
T 3d2f_A 2 STPFGLDLGNNNSVLAVARNRGIDIVVNEVSNRSTPSVVGFGPKNRYLGETGKNKQTSNIKNTVANLKRIIGLDYHHPDF 81 (675)
T ss_dssp CCCEEEECCSSEEEEEEEETTEEEEECCTTSCSSEECCEEECSSSEEETHHHHHHHTTCGGGEECCHHHHTTCBTTCTTH
T ss_pred CcEEEEEcCCCcEEEEEEECCeeEEEECCCCCcccceEEEECCCcEEecHHHHHhhhhChHhHHHHHHHHhCCCCCcHHH
Confidence 67999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhccCCceeeecCCCCeEEEEEecCceeeecHHHHHHHHHHHHHHHHHhhcCCCcceEEEEecCCCCHHHHHHHHHHH
Q 005222 81 QKDLMVLPFESCESPDGGISIKLKYLGETHTFCPVQVMGMLFSHLKDVAEKNLEMPVVDCVIGVPSYFTDLQRREYLNAA 160 (708)
Q Consensus 81 ~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~el~a~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~l~~Aa 160 (708)
+.+.+++||++++.++|.+.+.+.+.|+.+.++|+++++++|++|++.|+.+++.++.++|||||+||++.||+++++|+
T Consensus 82 ~~~~~~~p~~v~~~~~g~~~~~~~~~g~~~~~speei~a~~L~~lk~~ae~~lg~~v~~~VITVPa~f~~~qR~a~~~Aa 161 (675)
T 3d2f_A 82 EQESKHFTSKLVELDDKKTGAEVRFAGEKHVFSATQLAAMFIDKVKDTVKQDTKANITDVCIAVPPWYTEEQRYNIADAA 161 (675)
T ss_dssp HHHHTTCCSEEEECTTSBEEEEEEETTEEEEEEHHHHHHHHHHHHHHHHHHHHCSCCCEEEEEECTTCCHHHHHHHHHHH
T ss_pred HHHHhhCCeeEEEcCCCceEEEEEeCCCCceEcHHHHHHHHHHHHHHHHHHHhCCCcceEEEEECCCCCHHHHHHHHHHH
Confidence 99999999999998889999999988877899999999999999999999999999999999999999999999999999
Q ss_pred HHcCCcceeeecchHHHHHhccccccCCCC--CCceEEEEEEeCCcceEEEEEEEeCCeEEEEEEeCCCCcchHHHHHHH
Q 005222 161 SIAGLRPLRLIHDCTATALGYGIYKTDFAN--GGKSYIAFVDIGHSDTQVSIVSFEAGHMKVLSHAFDSSLGGRDFDDVL 238 (708)
Q Consensus 161 ~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~--~~~~~vlv~D~Gggt~dvsv~~~~~~~~~v~~~~~~~~lGG~~id~~l 238 (708)
++|||+++++++||+|||++|++.+.+++. ..+.++||||+||||||+|++++.+|.++|+++.++.++||++||+.|
T Consensus 162 ~~AGl~~~~li~EP~AAAlaygl~~~~~~~~~~~~~~vlV~DlGGGT~Dvsv~~~~~g~~~V~a~~gd~~lGG~d~D~~l 241 (675)
T 3d2f_A 162 RIAGLNPVRIVNDVTAAGVSYGIFKTDLPEGEEKPRIVAFVDIGHSSYTCSIMAFKKGQLKVLGTACDKHFGGRDFDLAI 241 (675)
T ss_dssp HHTTCEEEEEEEHHHHHHHHHHHHCSCCCCSSSCCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHH
T ss_pred HHcCCceEEEEcchHHHHHHHhhhccccccccCCCcEEEEEEcCCCcEEEEEEEecCCeEEEEEEcCCCCccHHHHHHHH
Confidence 999999999999999999999987644432 457899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcccccCCHHHHHHHHHHHHHhhhhcCCCCeeeEEeccccCCcceEEEeCHHHHHHHhhhhhHHHHHHH
Q 005222 239 FGYFAAKFKEQYKINVYSNVRACIRLRAACEKLKKVLSANAEAPLNIECLMDEKDVRGFIKREEFEELASGLTEKIAIPC 318 (708)
Q Consensus 239 ~~~l~~~~~~~~~~~~~~~~~~~~rL~~~~e~~K~~Ls~~~~~~i~i~~l~~~~d~~~~itr~~fe~~~~~~~~~i~~~i 318 (708)
++|+..+|+.++++++..+++++.||+.+||++|+.||.+.++.+.+++++++.++.+.|||++|+++|.|+++++..++
T Consensus 242 ~~~l~~~f~~~~~~~~~~~~~a~~rL~~~aE~aK~~Ls~~~~~~i~i~~~~~g~~~~~~itr~~fe~l~~~l~~~i~~~i 321 (675)
T 3d2f_A 242 TEHFADEFKTKYKIDIRENPKAYNRILTAAEKLKKVLSANTNAPFSVESVMNDVDVSSQLSREELEELVKPLLERVTEPV 321 (675)
T ss_dssp HHHHHHHHHHHTSCCGGGCHHHHHHHHHHHHHHHHHHHHCSEEEEEETTSSSSCCEEEEEEHHHHHHHTHHHHTTTTHHH
T ss_pred HHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHhcCcCCceEEEEeeeccCceEEEEEeHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999988889999998899999999999999999999999999999
Q ss_pred HHHHHHcCCCCCCccEEEEecCCCChHHHHHHHHhHhCCCCCCCCCchhhHhchHHHHHHHhCCCccccceEEeecccee
Q 005222 319 RKALADAGLHVDKIHSVEIVGSGSRIPAITRLLTSLFGREPRRSLNASECVARGCALQCAMLSPAFRVREYEVQDCNPYS 398 (708)
Q Consensus 319 ~~~l~~~~~~~~~i~~ViLvGG~srip~v~~~l~~~fg~~v~~~~n~~eava~GAa~~a~~~~~~~~~~~~~~~d~~~~~ 398 (708)
+++|+.+++++.+|+.|+||||+||+|+|+++|++.||.++..+.||++|||+|||++|+.+++.++++++.+.|++||+
T Consensus 322 ~~~L~~a~l~~~~I~~VvLvGGssriP~v~~~l~~~fg~~~~~~~nPdeaVA~GAa~~a~~ls~~~~v~~~~l~Dv~p~s 401 (675)
T 3d2f_A 322 TKALAQAKLSAEEVDFVEIIGGTTRIPTLKQSISEAFGKPLSTTLNQDEAIAKGAAFICAIHSPTLRVRPFKFEDIHPYS 401 (675)
T ss_dssp HHHHHHHTCCGGGCCEEEEESGGGGSHHHHHHHHHHHTSCEECCSCTTTHHHHHHHHHHHHTCSSCCCCCCEEEEEECSC
T ss_pred HHHHHHhCCChhhCcEEEEECCCccChHHHHHHHHhcCCCccccCCcchHHHHHHHHHHHHhCCCCcccceEEEeeeecc
Confidence 99999999999999999999999999999999999999888899999999999999999999999999999999999999
Q ss_pred eEEEecCCCcccCCCcceEEecCCCCcCceEEEEeeeccceEEEEEEeCCCCCCCCCCccceeEEeCCCCCCCCCc-cee
Q 005222 399 IGISSDEGPICIGSNTNGEVFPKGQPIPCVKVLTLQRSSLFHLELFYTNPNELPPGISSKVSCFTIGPFQGSNSEN-AKV 477 (708)
Q Consensus 399 i~i~~~~~~~~~~~~~~~~l~~~~~~~P~~k~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ig~~~i~~i~~~~~~~-~~i 477 (708)
||+++.++.. . +.+.+||+||+++|++++.+|++..++++.++|++...++.++|..||+|.|.|+||++.|. ++|
T Consensus 402 lgi~~~~~~~-~--~~~~~li~rnt~iP~~k~~~f~~~~~~~~~~~~~ge~~~~~~~n~~lg~f~l~gi~~~~~g~~~~i 478 (675)
T 3d2f_A 402 VSYSWDKQVE-D--EDHMEVFPAGSSFPSTKLITLNRTGDFSMAASYTDITQLPPNTPEQIANWEITGVQLPEGQDSVPV 478 (675)
T ss_dssp EEEEECCTTC-S--CSEEEEECTTEEESEEEEEEEEESSCEEEEEEESCGGGSCTTCCSEEEEEEEECCCCCSSCSCEEE
T ss_pred eEeeecCCCC-C--cceEEEEcCCCCCCcccceeeeecCCceEEEEEcCCcccccccCceeeEEEecCcCCCCCCCcceE
Confidence 9999986421 1 35899999999999999999999999999998755444543489999999999999988876 599
Q ss_pred EEEEEEcCCeeEEEEEeeeeeccCCCCcccccccccccccccccccCCCCCccccccccccccccCCCCccccccccccc
Q 005222 478 KVTVKLNLHGIVSVESAWLIEGHGDDPVTKHNARSKMDKMESEGVSIDSSTTVEDVQDSASVQSKSSHSSAVSVVRDKAG 557 (708)
Q Consensus 478 ~v~~~ld~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~ 557 (708)
+|+|.+|.||+|+|+++.++++.+.+ +.|.++
T Consensus 479 ~v~f~id~~Gil~V~a~~~~~~~~~~------------------------------------------------~~~~t~ 510 (675)
T 3d2f_A 479 KLKLRCDPSGLHTIEEAYTIEDIEAG------------------------------------------------SDTKTV 510 (675)
T ss_dssp EEEEEECTTSCEEEEEEEEECC------------------------------------------------------CCCC
T ss_pred EEEEEEcCCCcEEEEEEEEeeccccc------------------------------------------------ccccCc
Confidence 99999999999999999776532110 014556
Q ss_pred eeeeEEEeeeccCCCCHHHHHHHHHHHHHHhhcchhHHHHHHHhhhHHHHHHHHHHHhhhhhccCCCHHHHHHHHHHHHH
Q 005222 558 RRLDISISETIYGGMTKPELALAQETENLLAQQDITMEQTKDKKNALESYVYEMRNKLFSTYRSFASDQEREGISRSLQE 637 (708)
Q Consensus 558 ~~~~l~i~~~~~~~ls~~e~~~~~~~~~~~~~~D~~~~~~~~a~N~LEs~iy~~r~~l~~~~~~~~~~~e~~~l~~~l~e 637 (708)
+..+++|+... ++||+++++++++++.+|..+|+.++++.++||+||+|+|++|+.|++.+.+++++++++++...|++
T Consensus 511 ~~~~i~i~~~~-~~ls~~ei~~~~~~~~~~~~~D~~~~~~~~~~n~le~~i~~~~~~l~~~~~~~~~~~~~~~~~~~l~~ 589 (675)
T 3d2f_A 511 KKDDLTIVAHT-FGLDAKKLNELIEKENEMLAQDKLVAETEDRKNTLEEYIYTLRGKLEEEYAPFASDAEKTKLQGMLNK 589 (675)
T ss_dssp EEEECEEEEEC-SSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTGGGSCHHHHHHHHHHHHH
T ss_pred ceeeEEEecCC-CCCCHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHH
Confidence 77788888765 47999999999999999999999999999999999999999999998778899999999999999999
Q ss_pred HHHHhhcCCCCcCHHHHHHHHHHHHHhHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhcCCCCCc
Q 005222 638 TEEWLYDDGDDETANTYASKLEDLKKLVDPIENRYKDGEARAQATRDLLQCIVEYRTAVGSLPPEE 703 (708)
Q Consensus 638 ~~~WL~~~~~~a~~~~~~~kl~~L~~~~~pi~~R~~e~~~rp~~~~~l~~~l~~~~~~~~~~~~~~ 703 (708)
+++|||++++++++++|++|+++|++++.||..|+++++.||++++.|++.|++++++++...+++
T Consensus 590 ~~~wl~~~~~~~~~~~~~~~~~~l~~~~~~i~~r~~e~~~rp~~~~~~~~~~~~~~~~~~~~~~~~ 655 (675)
T 3d2f_A 590 AEEWLYDEGFDSIKAKYIAKYEELASLGNIIRGRYLAKEEEKKQAIRSKQEASQMAAMAEKLAAQR 655 (675)
T ss_dssp HHHHTTTGGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-------------------
T ss_pred HHHHHhcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999888889999999999999999999999999999999999999999999999998876544
No 2
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=100.00 E-value=1.8e-99 Score=863.50 Aligned_cols=590 Identities=27% Similarity=0.453 Sum_probs=542.8
Q ss_pred CeEEEEEccccceEEEEEeCCceEEEeCCCCCccceEEEEEcC-CcEEEcHHHHHhHhcCCcchHHHHHHhhCCCCCChH
Q 005222 1 MSVVGFDIGNENCVIATVKHRGVDVLLNEESNRETPSIVCFGE-KQRFIGAAGYASAMMHPKSTVSQVKRLIGRRYGDPV 79 (708)
Q Consensus 1 M~vvGID~GTt~s~va~~~~~~~~ii~~~~g~r~~Ps~v~~~~-~~~~~G~~A~~~~~~~~~~~~~~~k~llg~~~~~~~ 79 (708)
..+||||||||||+||++.++.++++.|..|++++||+|+|.+ +++++|..|..++..+|.++++++|||||+.++++.
T Consensus 2 ~~viGIDlGTT~S~Va~~~~g~~~ii~n~~g~~~~PS~V~~~~~~~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~~d~~ 81 (605)
T 4b9q_A 2 GKIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGCTLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEE 81 (605)
T ss_dssp CCEEEEECCSSEEEEEEEETTEEEECCCTTSCSSEECCEEECTTSCEEESHHHHHTTTTCGGGEECCGGGTTTCBTTSHH
T ss_pred CcEEEEEcCCCcEEEEEEECCEEEEEECCCCCcccceEEEEeCCCcEEecHHHHHHHHhCCCcEehhhHHhhCCCCCCHH
Confidence 1499999999999999999999999999999999999999974 579999999999999999999999999999999999
Q ss_pred HHhhhccCCceeeecCCCCeEEEEEecCceeeecHHHHHHHHHHHHHHHHHhhcCCCcceEEEEecCCCCHHHHHHHHHH
Q 005222 80 VQKDLMVLPFESCESPDGGISIKLKYLGETHTFCPVQVMGMLFSHLKDVAEKNLEMPVVDCVIGVPSYFTDLQRREYLNA 159 (708)
Q Consensus 80 v~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~el~a~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~l~~A 159 (708)
++...+++||.++..++|.+.+.+ .+ +.++|+++++++|++|++.|+.+++.++.++|||||+||++.||+++++|
T Consensus 82 v~~~~~~~p~~~~~~~~g~~~~~~--~~--~~~~p~ei~a~iL~~lk~~ae~~lg~~v~~~VITVPa~f~~~qr~a~~~A 157 (605)
T 4b9q_A 82 VQRDVSIMPFKIIAADNGDAWVEV--KG--QKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDA 157 (605)
T ss_dssp HHHHHTTCSSEEEECTTSBEEEEE--TT--EEECHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHHHH
T ss_pred HHHHhhcCCeEEEEcCCCceEEEE--CC--EEECHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHH
Confidence 999999999999998888887765 23 68999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCcceeeecchHHHHHhccccccCCCCCCceEEEEEEeCCcceEEEEEEEeC----CeEEEEEEeCCCCcchHHHH
Q 005222 160 ASIAGLRPLRLIHDCTATALGYGIYKTDFANGGKSYIAFVDIGHSDTQVSIVSFEA----GHMKVLSHAFDSSLGGRDFD 235 (708)
Q Consensus 160 a~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~Gggt~dvsv~~~~~----~~~~v~~~~~~~~lGG~~id 235 (708)
+++|||+++++++||+|||++|++... ..+..+||||+||||||+|++++.+ +.++++++.++.++||.+||
T Consensus 158 a~~AGl~v~~li~EP~AAAlaygl~~~----~~~~~vlV~DlGGGT~Dvsi~~~~~~~~~~~~evla~~gd~~lGG~d~D 233 (605)
T 4b9q_A 158 GRIAGLEVKRIINEPTAAALAYGLDKG----TGNRTIAVYDLGGGAFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFD 233 (605)
T ss_dssp HHHTTCEEEEEEEHHHHHHHHHHTTSC----CSSEEEEEEEECSSCEEEEEEEEEESSSCEEEEEEEEEEETTCSHHHHH
T ss_pred HHHcCCceEEEeCcHHHHHHHhhhhcc----CCCCEEEEEECCCCeEEEEEEEEecCCCCceEEEEEecCCCCcChHHHH
Confidence 999999999999999999999987653 3468999999999999999999988 89999999999999999999
Q ss_pred HHHHHHHHHHHHHhhcccccCCHHHHHHHHHHHHHhhhhcCCCCeeeEEeccccCC----cceEEEeCHHHHHHHhhhhh
Q 005222 236 DVLFGYFAAKFKEQYKINVYSNVRACIRLRAACEKLKKVLSANAEAPLNIECLMDE----KDVRGFIKREEFEELASGLT 311 (708)
Q Consensus 236 ~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~~e~~K~~Ls~~~~~~i~i~~l~~~----~d~~~~itr~~fe~~~~~~~ 311 (708)
..|++|+.++|+.+++.++..+++++.+|+.+||++|+.||....+.+.++.+..+ .++.+.|||++|+++|+|++
T Consensus 234 ~~l~~~l~~~f~~~~~~~~~~~~~~~~~L~~~aE~~K~~Ls~~~~~~i~~~~~~~~~~g~~~~~~~itr~~~e~l~~~~~ 313 (605)
T 4b9q_A 234 SRLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLV 313 (605)
T ss_dssp HHHHHHHHHHHHHHTCCCGGGCHHHHHHHHHHHHHHHHHTTTCSEEEEEEEEEEECSSSEEEEEEEEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhcCCCcccCHHHHHHHHHHHHHHHHhcCcCCCeEEEEeeeccCCCCCeeEEEEEeHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999998888876543 67889999999999999999
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEEecCCCChHHHHHHHHhHhCCCCCCCCCchhhHhchHHHHHHHhCCCccccceEE
Q 005222 312 EKIAIPCRKALADAGLHVDKIHSVEIVGSGSRIPAITRLLTSLFGREPRRSLNASECVARGCALQCAMLSPAFRVREYEV 391 (708)
Q Consensus 312 ~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~srip~v~~~l~~~fg~~v~~~~n~~eava~GAa~~a~~~~~~~~~~~~~~ 391 (708)
+++..+++++|+.+++...+|+.|+||||+||+|+|+++|+++||.++....||++|||+|||++|+.+++. ++++.+
T Consensus 314 ~~i~~~v~~~L~~a~~~~~~i~~VvLvGG~sriP~v~~~l~~~fg~~~~~~~nPdeaVA~GAai~a~~l~~~--~~~~~l 391 (605)
T 4b9q_A 314 NRSIEPLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGVLTGD--VKDVLL 391 (605)
T ss_dssp HHTTHHHHHHHHHTTCCGGGCSEEEEESGGGGSHHHHHHHHHHHTSCCCSSSCTTTHHHHHHHHHHHHHHTS--SCSEEE
T ss_pred HHHHHHHHHHHHHcCCCHHHCcEEEEeCCccCchHHHHHHHHHhccCcCCCcChhHHHHHhHHHHHHHhcCC--CCceEE
Confidence 999999999999999999999999999999999999999999999999999999999999999999999886 578999
Q ss_pred eeccceeeEEEecCCCcccCCCcceEEecCCCCcCceEEEEeeeccc----eEEEEEEeCCCCCCCCCCccceeEEeCCC
Q 005222 392 QDCNPYSIGISSDEGPICIGSNTNGEVFPKGQPIPCVKVLTLQRSSL----FHLELFYTNPNELPPGISSKVSCFTIGPF 467 (708)
Q Consensus 392 ~d~~~~~i~i~~~~~~~~~~~~~~~~l~~~~~~~P~~k~~~~~~~~~----~~i~~~~~~~~~~~~~~~~~ig~~~i~~i 467 (708)
.|++|++||+++.+ +.+.+||+||+++|++++.+|++..| +.|.+++ |++....+|..||+|.|.++
T Consensus 392 ~dv~p~slgie~~~-------g~~~~ii~rnt~iP~~~~~~f~t~~d~q~~v~i~v~~--ge~~~~~~n~~lg~~~l~~i 462 (605)
T 4b9q_A 392 LDVTPLSLGIETMG-------GVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQ--GERKRAADNKSLGQFNLDGI 462 (605)
T ss_dssp ECBCSSCEEEEETT-------TEEEEEECTTCBSSEEEEEEECCSSTTCCEEEEEEEE--SSCSBGGGSEEEEEEEEECC
T ss_pred EeeeeeEEEEEEcC-------CEEEEEEeCCCcCCcceEEEeeeecccCceEEEEEEe--ccccccccCCEeeEEEEeCC
Confidence 99999999999986 47899999999999999999987554 5566554 34444589999999999999
Q ss_pred CCCCCCcceeEEEEEEcCCeeEEEEEeeeeeccCCCCcccccccccccccccccccCCCCCccccccccccccccCCCCc
Q 005222 468 QGSNSENAKVKVTVKLNLHGIVSVESAWLIEGHGDDPVTKHNARSKMDKMESEGVSIDSSTTVEDVQDSASVQSKSSHSS 547 (708)
Q Consensus 468 ~~~~~~~~~i~v~~~ld~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 547 (708)
||++.|.++|+|+|.+|.||+|+|++.+
T Consensus 463 ~~~~~g~~~i~v~f~id~~gil~v~a~~---------------------------------------------------- 490 (605)
T 4b9q_A 463 NPAPRGMPQIEVTFDIDADGILHVSAKD---------------------------------------------------- 490 (605)
T ss_dssp CCCSTTCCCEEEEEEECTTSCEEEEEEE----------------------------------------------------
T ss_pred CCCcCCCceEEEEEEEcCCcEEEEEEEe----------------------------------------------------
Confidence 9999999999999999999999999973
Q ss_pred cccccccccceeeeEEEeeeccCCCCHHHHHHHHHHHHHHhhcchhHHHHHHHhhhHHHHHHHHHHHhhhhhccCCCHHH
Q 005222 548 AVSVVRDKAGRRLDISISETIYGGMTKPELALAQETENLLAQQDITMEQTKDKKNALESYVYEMRNKLFSTYRSFASDQE 627 (708)
Q Consensus 548 ~~~~~~k~~~~~~~l~i~~~~~~~ls~~e~~~~~~~~~~~~~~D~~~~~~~~a~N~LEs~iy~~r~~l~~~~~~~~~~~e 627 (708)
+.+++...++|+.. .+||++|++++.+++.++..+|++.+++.++||+||+|+|++|+.|++ +.+++++++
T Consensus 491 ------~~tg~~~~i~i~~~--~~ls~~ei~~~~~~~~~~~~~d~~~~~~~~~~n~~e~~~~~~~~~~~~-~~~~~~~~~ 561 (605)
T 4b9q_A 491 ------KNSGKEQKITIKAS--SGLNEDEIQKMVRDAEANAEADRKCEELVQTRNQGDHLLHSTRKQVEE-AGDKLPADD 561 (605)
T ss_dssp ------TTTCCEECCEEESC--CSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HGGGSCHHH
T ss_pred ------cCCCcEEEEEecCC--CCCCHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhhhCCHHH
Confidence 22344556777655 469999999999999999999999999999999999999999999975 788999999
Q ss_pred HHHHHHHHHHHHHHhhcCCCCcCHHHHHHHHHHHHHhHHHHHHHHHh
Q 005222 628 REGISRSLQETEEWLYDDGDDETANTYASKLEDLKKLVDPIENRYKD 674 (708)
Q Consensus 628 ~~~l~~~l~e~~~WL~~~~~~a~~~~~~~kl~~L~~~~~pi~~R~~e 674 (708)
++++...++++++||+.+ +.++|++++++|++.+.||..++++
T Consensus 562 ~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~l~~~~~~~~~~~~~ 604 (605)
T 4b9q_A 562 KTAIESALTALETALKGE----DKAAIEAKMQELAQVSQKLMEIAQQ 604 (605)
T ss_dssp HHHHHHHHHHHHHHHHSS----CHHHHHHHHHHHHHHTHHHHHHC--
T ss_pred HHHHHHHHHHHHHHHhcC----CHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999976 4899999999999999999988764
No 3
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=100.00 E-value=2.3e-98 Score=854.46 Aligned_cols=589 Identities=27% Similarity=0.460 Sum_probs=539.1
Q ss_pred eEEEEEccccceEEEEEeCCceEEEeCCCCCccceEEEEEc-CCcEEEcHHHHHhHhcCCcchHHHHHHhhCCCCCChHH
Q 005222 2 SVVGFDIGNENCVIATVKHRGVDVLLNEESNRETPSIVCFG-EKQRFIGAAGYASAMMHPKSTVSQVKRLIGRRYGDPVV 80 (708)
Q Consensus 2 ~vvGID~GTt~s~va~~~~~~~~ii~~~~g~r~~Ps~v~~~-~~~~~~G~~A~~~~~~~~~~~~~~~k~llg~~~~~~~v 80 (708)
.+||||||||||+||++.+|.++++.|+.|++++||+|+|. +++++||..|..+...+|.++++++||+||+.++++.+
T Consensus 3 ~viGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~~~~~~~vG~~A~~~~~~~p~~t~~~~Kr~iG~~~~d~~v 82 (605)
T 2kho_A 3 KIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEV 82 (605)
T ss_dssp -CEEEECCSSEEEEEEEETTEEEECCCTTSCSSEECEEEECTTSCEEESHHHHTTTTTCGGGEEECGGGTTTCBSSSTTH
T ss_pred CEEEEEcCCcCEEEEEEECCEEEEEECCCCCcccceEEEEECCCcEEECHHHHHHhhhCCCCEeehhhHhhCCCCCcHHH
Confidence 48999999999999999999999999999999999999995 56789999999999999999999999999999999999
Q ss_pred HhhhccCCceeeecCCCCeEEEEEecCceeeecHHHHHHHHHHHHHHHHHhhcCCCcceEEEEecCCCCHHHHHHHHHHH
Q 005222 81 QKDLMVLPFESCESPDGGISIKLKYLGETHTFCPVQVMGMLFSHLKDVAEKNLEMPVVDCVIGVPSYFTDLQRREYLNAA 160 (708)
Q Consensus 81 ~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~el~a~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~l~~Aa 160 (708)
+...+.+||.++...+|.+.+.+ .| +.++|+++++++|+++++.|+.+++.++.++|||||+||++.||+++++|+
T Consensus 83 ~~~~~~~p~~~~~~~~g~~~i~~--~g--~~~~~~ei~a~~L~~l~~~ae~~l~~~v~~~VitVPa~f~d~qr~a~~~A~ 158 (605)
T 2kho_A 83 QRDVSIMPFKIIAADNGDAWVEV--KG--QKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAG 158 (605)
T ss_dssp HHHHHHCSSCEEECTTSBEEEEE--TT--EEECHHHHHHHHHHHHHHHHHHHHCSCCCEEEEEECTTCCHHHHHHHHHHH
T ss_pred HHHhhcCCeEEEECCCCceEEEE--CC--EEEcHHHHHHHHHHHHHHHHHHHhCCCCcEEEEEECCCCCHHHHHHHHHHH
Confidence 98888999999888888887776 34 589999999999999999999999999999999999999999999999999
Q ss_pred HHcCCcceeeecchHHHHHhccccccCCCCCCceEEEEEEeCCcceEEEEEEEe----CCeEEEEEEeCCCCcchHHHHH
Q 005222 161 SIAGLRPLRLIHDCTATALGYGIYKTDFANGGKSYIAFVDIGHSDTQVSIVSFE----AGHMKVLSHAFDSSLGGRDFDD 236 (708)
Q Consensus 161 ~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~Gggt~dvsv~~~~----~~~~~v~~~~~~~~lGG~~id~ 236 (708)
+.|||+++++++||+|||++|++... ..+..+||||+||||||+|++++. ++.++++++.++.++||++||.
T Consensus 159 ~~AGl~v~~li~EP~AAAlay~l~~~----~~~~~vlV~DlGGGT~Dvsi~~~~~~~~~g~~~v~a~~gd~~lGG~d~D~ 234 (605)
T 2kho_A 159 RIAGLEVKRIINEPTAAALAYGLDKG----TGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDS 234 (605)
T ss_dssp HTTTCEEEEEEEHHHHHHHHTTTTSS----SSEEEEEEEEECSSCEEEEEEEEECTTTSCEEEEEEEEEESSCSGGGTHH
T ss_pred HHcCCceEEEecCHHHHHHHhhhccc----CCCCEEEEEECCCCeEEEEEEEEEecCCCCeEEEEEECCCCCccHHHHHH
Confidence 99999999999999999999997642 257899999999999999999998 7899999999999999999999
Q ss_pred HHHHHHHHHHHHhhcccccCCHHHHHHHHHHHHHhhhhcCCCCeeeEEeccccCC----cceEEEeCHHHHHHHhhhhhH
Q 005222 237 VLFGYFAAKFKEQYKINVYSNVRACIRLRAACEKLKKVLSANAEAPLNIECLMDE----KDVRGFIKREEFEELASGLTE 312 (708)
Q Consensus 237 ~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~~e~~K~~Ls~~~~~~i~i~~l~~~----~d~~~~itr~~fe~~~~~~~~ 312 (708)
.|++|+.++|+.+++.++..+++++.+|+.+||++|+.||....+.+.++.++++ .++.+.|||++|+++|+|+++
T Consensus 235 ~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~aE~~K~~ls~~~~~~i~l~~~~~~~~G~~~~~~~itr~~fe~l~~~~~~ 314 (605)
T 2kho_A 235 RLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVN 314 (605)
T ss_dssp HHHHHHHHHHHHHHSCCSTTCHHHHHHHHHHHHHHHHHTTSSSEEEEEEEEEEEETTEEEEEEEEEEHHHHHTTCCSTTG
T ss_pred HHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHHHHcCCCCceEEEecccccCCCCceEEEEEEeHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999998888988876643 567889999999999999999
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEEecCCCChHHHHHHHHhHhCCCCCCCCCchhhHhchHHHHHHHhCCCccccceEEe
Q 005222 313 KIAIPCRKALADAGLHVDKIHSVEIVGSGSRIPAITRLLTSLFGREPRRSLNASECVARGCALQCAMLSPAFRVREYEVQ 392 (708)
Q Consensus 313 ~i~~~i~~~l~~~~~~~~~i~~ViLvGG~srip~v~~~l~~~fg~~v~~~~n~~eava~GAa~~a~~~~~~~~~~~~~~~ 392 (708)
++..+++++|+++++...+|+.|+||||+||+|+|+++|+++||.++....||++|||+|||++|+.+++. ++++.+.
T Consensus 315 ~i~~~i~~~L~~a~~~~~~i~~VvLvGG~srip~v~~~l~~~fg~~~~~~~npd~aVA~GAa~~a~~l~~~--~~~~~l~ 392 (605)
T 2kho_A 315 RSIEPLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGVLTGD--VKDVLLL 392 (605)
T ss_dssp GGTSHHHHHHHTTTCCTTTCSEEEEESGGGGSHHHHHHHHHHHSSCCBCSSCTTTHHHHHHHHHHTTTTTS--CCCCCCS
T ss_pred HHHHHHHHHHHHcCCChhhCceEEEECCcccChHHHHHHHHhcCCCcCcCCCcchHHHHHHHHHHHHhcCC--ccCceEE
Confidence 99999999999999999999999999999999999999999999989999999999999999999999876 5789999
Q ss_pred eccceeeEEEecCCCcccCCCcceEEecCCCCcCceEEEEeeeccc----eEEEEEEeCCCCCCCCCCccceeEEeCCCC
Q 005222 393 DCNPYSIGISSDEGPICIGSNTNGEVFPKGQPIPCVKVLTLQRSSL----FHLELFYTNPNELPPGISSKVSCFTIGPFQ 468 (708)
Q Consensus 393 d~~~~~i~i~~~~~~~~~~~~~~~~l~~~~~~~P~~k~~~~~~~~~----~~i~~~~~~~~~~~~~~~~~ig~~~i~~i~ 468 (708)
|++|++||+++.+ +.+.+||+||+++|++++.+|++..| +.|.+++ |++....+|..||+|.|.++|
T Consensus 393 dv~p~slgi~~~~-------g~~~~li~r~t~iP~~~~~~f~t~~d~q~~v~i~v~~--ge~~~~~~n~~lg~~~l~~i~ 463 (605)
T 2kho_A 393 DVTPLSLGIETMG-------GVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQ--GERKRAADNKSLGQFNLDGIN 463 (605)
T ss_dssp BCCCCCEEEEETT-------TEEEEEECTTBCSSEEEEEEECCSSTTCCEEEEEEEE--SSCSBGGGSEEEEEEEEECCC
T ss_pred eeeeeeccccccC-------CceEEEEecccccCccceEEEEecCCCceEEEEEEEe--ccCcccccCcEEeEEEecCCC
Confidence 9999999999986 47899999999999999999987543 4555544 344445789999999999999
Q ss_pred CCCCCcceeEEEEEEcCCeeEEEEEeeeeeccCCCCcccccccccccccccccccCCCCCccccccccccccccCCCCcc
Q 005222 469 GSNSENAKVKVTVKLNLHGIVSVESAWLIEGHGDDPVTKHNARSKMDKMESEGVSIDSSTTVEDVQDSASVQSKSSHSSA 548 (708)
Q Consensus 469 ~~~~~~~~i~v~~~ld~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 548 (708)
+++.|.++|+|+|.+|.||+|+|++.+
T Consensus 464 ~~~~g~~~i~v~f~id~~gil~v~a~~----------------------------------------------------- 490 (605)
T 2kho_A 464 PAPRGMPQIEVTFDIDADGILHVSAKD----------------------------------------------------- 490 (605)
T ss_dssp SCCTTCSCEEEEEEECTTSCEEEEEEE-----------------------------------------------------
T ss_pred CCCCCCcEEEEEEEEcCCCceeEEEEE-----------------------------------------------------
Confidence 999999999999999999999999863
Q ss_pred ccccccccceeeeEEEeeeccCCCCHHHHHHHHHHHHHHhhcchhHHHHHHHhhhHHHHHHHHHHHhhhhhccCCCHHHH
Q 005222 549 VSVVRDKAGRRLDISISETIYGGMTKPELALAQETENLLAQQDITMEQTKDKKNALESYVYEMRNKLFSTYRSFASDQER 628 (708)
Q Consensus 549 ~~~~~k~~~~~~~l~i~~~~~~~ls~~e~~~~~~~~~~~~~~D~~~~~~~~a~N~LEs~iy~~r~~l~~~~~~~~~~~e~ 628 (708)
+.+++...++|+.. .+||+++++++.+++.+|..+|+.++++.++||+||+|+|++|+.|++ +.++++++++
T Consensus 491 -----~~tg~~~~i~i~~~--~~ls~~~i~~~~~~~~~~~~~d~~~~~~~~~~n~~e~~~~~~~~~l~~-~~~~~~~~~~ 562 (605)
T 2kho_A 491 -----KNSGKEQKITIKAS--SGLNEDEIQKMVRDAEANAEADRKFDELVQTRNQGDHLLHSTRKQVEE-AGDKLPADDK 562 (605)
T ss_dssp -----TTTCCEEEEEECTT--SSCCHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HGGGSCHHHH
T ss_pred -----cCCCceeecccccc--cCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhccCCHHHH
Confidence 22234456777655 579999999999999999999999999999999999999999999976 8889999999
Q ss_pred HHHHHHHHHHHHHhhcCCCCcCHHHHHHHHHHHHHhHHHHHHHHHh
Q 005222 629 EGISRSLQETEEWLYDDGDDETANTYASKLEDLKKLVDPIENRYKD 674 (708)
Q Consensus 629 ~~l~~~l~e~~~WL~~~~~~a~~~~~~~kl~~L~~~~~pi~~R~~e 674 (708)
+++...++++++||+.+ ++++|++++++|++++.||..|++.
T Consensus 563 ~~i~~~~~~~~~~l~~~----~~~~~~~~~~~l~~~~~~~~~~~~~ 604 (605)
T 2kho_A 563 TAIESALTALETALKGE----DKAAIEAKMQELAQVSQKLMEIAQQ 604 (605)
T ss_dssp HHHHHHHHHHHHHTTSS----CHHHHHHHHHHHHTTCHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHhcC----CHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999953 7899999999999999999998753
No 4
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=100.00 E-value=1.2e-92 Score=800.16 Aligned_cols=542 Identities=33% Similarity=0.539 Sum_probs=500.0
Q ss_pred eEEEEEccccceEEEEEeCCceEEEeCCCCCccceEEEEEcCCcEEEcHHHHHhHhcCCcchHHHHHHhhCCCCCChHHH
Q 005222 2 SVVGFDIGNENCVIATVKHRGVDVLLNEESNRETPSIVCFGEKQRFIGAAGYASAMMHPKSTVSQVKRLIGRRYGDPVVQ 81 (708)
Q Consensus 2 ~vvGID~GTt~s~va~~~~~~~~ii~~~~g~r~~Ps~v~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~llg~~~~~~~v~ 81 (708)
.+||||||||||+||++.+|+++++.|+.|++++||+|+|.+++++||..|..++..+|.++++++|||||+.++++.++
T Consensus 5 ~~iGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~~~~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~~d~~v~ 84 (554)
T 1yuw_A 5 PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDAVVQ 84 (554)
T ss_dssp CCEEEEECSSEEEEEEECSSSEEECCCTTSCSEEECCEEECSSCEEETHHHHTTTTTCGGGEECCGGGTTTCCSSCSHHH
T ss_pred CEEEEEeCcccEEEEEEECCEEEEEECCCCCeecceEEEEcCCcEEEcHHHHHhhhhChhhehHhhHHhcCCCCCcHHHH
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhccCCceeeecCCCCeEEEEEecCceeeecHHHHHHHHHHHHHHHHHhhcCCCcceEEEEecCCCCHHHHHHHHHHHH
Q 005222 82 KDLMVLPFESCESPDGGISIKLKYLGETHTFCPVQVMGMLFSHLKDVAEKNLEMPVVDCVIGVPSYFTDLQRREYLNAAS 161 (708)
Q Consensus 82 ~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~el~a~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~l~~Aa~ 161 (708)
..++.+||.++.. +|.+.+.+.+.+..+.++|+++++++|++|++.|+.+++.++.++|||||++|++.||+++++|++
T Consensus 85 ~~~~~~p~~v~~~-~g~~~~~v~~~~~~~~~sp~ei~a~~L~~lk~~ae~~lg~~v~~~VitVPa~f~~~qr~a~~~A~~ 163 (554)
T 1yuw_A 85 SDMKHWPFMVVND-AGRPKVQVEYKGETKSFYPEEVSSMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGT 163 (554)
T ss_dssp HHHTTCSSEEEEE-TTEEEEEEEETTEEEEECHHHHHHHHHHHHHHHHHHHHSSCCCEEEEEECTTCCHHHHHHHHHHHH
T ss_pred HHhhcCCeEEEec-CCceEEEEEECCCceEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHHHH
Confidence 9999999999854 788888999888888999999999999999999999999999999999999999999999999999
Q ss_pred HcCCcceeeecchHHHHHhccccccCCCCCCceEEEEEEeCCcceEEEEEEEeCCeEEEEEEeCCCCcchHHHHHHHHHH
Q 005222 162 IAGLRPLRLIHDCTATALGYGIYKTDFANGGKSYIAFVDIGHSDTQVSIVSFEAGHMKVLSHAFDSSLGGRDFDDVLFGY 241 (708)
Q Consensus 162 ~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~Gggt~dvsv~~~~~~~~~v~~~~~~~~lGG~~id~~l~~~ 241 (708)
.||++++++++||+|||++|++.... ..+..+||||+||||||+|++++.++.++++++.++.++||++||+.|++|
T Consensus 164 ~AGl~~~~li~EP~AAAlay~~~~~~---~~~~~vlV~D~GgGT~Dvsv~~~~~g~~~v~a~~g~~~lGG~d~d~~l~~~ 240 (554)
T 1yuw_A 164 IAGLNVLRIINEPTAAAIAYGLDKKV---GAERNVLIFDLGGGTFDVSILTIAAGIFEVKSTAGDTHLGGEDFDNRMVNH 240 (554)
T ss_dssp TTTCEEEEEEEHHHHHHHHTTCSTTC---SSCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHHH
T ss_pred HcCCCeEEEeCcHHHHHHHHHhhccC---CCCcEEEEEEcCCCeEEEEEEEEcCCcEEEEEEeCCCCCCHHHHHHHHHHH
Confidence 99999999999999999999876531 246899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcccccCCHHHHHHHHHHHHHhhhhcCCCCeeeEEeccccCCcceEEEeCHHHHHHHhhhhhHHHHHHHHHH
Q 005222 242 FAAKFKEQYKINVYSNVRACIRLRAACEKLKKVLSANAEAPLNIECLMDEKDVRGFIKREEFEELASGLTEKIAIPCRKA 321 (708)
Q Consensus 242 l~~~~~~~~~~~~~~~~~~~~rL~~~~e~~K~~Ls~~~~~~i~i~~l~~~~d~~~~itr~~fe~~~~~~~~~i~~~i~~~ 321 (708)
+..+|+.+++.++..+++++.+|+.+||++|+.||...++.+.++++++|.++...|+|++|+++++++++++..+++++
T Consensus 241 l~~~~~~~~~~~~~~~~~~~~~l~~~aE~~K~~ls~~~~~~i~i~~~~~g~~~~~~ltr~~~e~l~~~~~~~i~~~i~~~ 320 (554)
T 1yuw_A 241 FIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKA 320 (554)
T ss_dssp HHHHHHHHTSCCTTSCHHHHHHHHHHHHHHHHHHTTSSEEEEEETTCSSSCCEEEEEEHHHHHHHTHHHHHHTTHHHHHH
T ss_pred HHHHHHHHhCCCcccCHHHHHHHHHHHHHHhhhcccCceEEEEEeeccCCceEEEEEEHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999998899999999999999999999999999999999
Q ss_pred HHHcCCCCCCccEEEEecCCCChHHHHHHHHhHhC-CCCCCCCCchhhHhchHHHHHHHhCC--CccccceEEeecccee
Q 005222 322 LADAGLHVDKIHSVEIVGSGSRIPAITRLLTSLFG-REPRRSLNASECVARGCALQCAMLSP--AFRVREYEVQDCNPYS 398 (708)
Q Consensus 322 l~~~~~~~~~i~~ViLvGG~srip~v~~~l~~~fg-~~v~~~~n~~eava~GAa~~a~~~~~--~~~~~~~~~~d~~~~~ 398 (708)
|+++++.+.+|+.|+||||+||+|+|+++|++.|+ .++..+.||++|||+|||++|+.+++ .++++++.+.|++|++
T Consensus 321 L~~a~~~~~~i~~VvLvGG~srip~v~~~l~~~f~~~~v~~~~np~~aVA~Gaa~~a~~l~~~~~~~~~~~~~~dv~p~s 400 (554)
T 1yuw_A 321 LRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLDVTPLS 400 (554)
T ss_dssp HHHTTCCGGGCCEEEEESGGGGCHHHHHHHHHHTTTCCCBCCSCTTTHHHHHHHHHHHHTTSCCCCCTTSSCCCCBCSSC
T ss_pred HHHcCCChhhCcEEEEECCcccChHHHHHHHHHcCCCccccCCCchhHHHHHHHHHHHHhcCCccccccceEEEEeeeeE
Confidence 99999999999999999999999999999999995 88889999999999999999999987 4667899999999999
Q ss_pred eEEEecCCCcccCCCcceEEecCCCCcCceEEEEeeeccc----eEEEEEEeCCCCCCCCCCccceeEEeCCCCCCCCCc
Q 005222 399 IGISSDEGPICIGSNTNGEVFPKGQPIPCVKVLTLQRSSL----FHLELFYTNPNELPPGISSKVSCFTIGPFQGSNSEN 474 (708)
Q Consensus 399 i~i~~~~~~~~~~~~~~~~l~~~~~~~P~~k~~~~~~~~~----~~i~~~~~~~~~~~~~~~~~ig~~~i~~i~~~~~~~ 474 (708)
||+++.+ +.+.+||+||+++|++++.+|++..| +.|.+++ |++....+|..||+|.|.++|+++.|.
T Consensus 401 lgi~~~~-------g~~~~li~r~t~iP~~~~~~f~~~~d~q~~v~i~v~~--ge~~~~~~n~~lg~~~l~~i~~~~~g~ 471 (554)
T 1yuw_A 401 LGIETAG-------GVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYE--GERAMTKDNNLLGKFELTGIPPAPRGV 471 (554)
T ss_dssp EEEEETT-------TEEEEEECTTCBSSEEEEEEEEESSTTCSEEEEEEEE--SSSSBGGGSEEEEEEEEECCCCCSTTC
T ss_pred EEEEecC-------ceEEEEEECCCccCceeEEEeeeccCCCceEEEEEEe--cCccccccCcEEEEEEEeCCCCCcccc
Confidence 9999986 47899999999999999999987433 4555544 344445789999999999999999999
Q ss_pred ceeEEEEEEcCCeeEEEEEeeeeeccCCCCcccccccccccccccccccCCCCCccccccccccccccCCCCcccccccc
Q 005222 475 AKVKVTVKLNLHGIVSVESAWLIEGHGDDPVTKHNARSKMDKMESEGVSIDSSTTVEDVQDSASVQSKSSHSSAVSVVRD 554 (708)
Q Consensus 475 ~~i~v~~~ld~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 554 (708)
++|+|+|.+|.||+|+|++.+ +
T Consensus 472 ~~i~v~f~id~~gil~v~a~~----------------------------------------------------------~ 493 (554)
T 1yuw_A 472 PQIEVTFDIDANGILNVSAVD----------------------------------------------------------K 493 (554)
T ss_dssp CCEEEEEEECTTCCEEEEEEE----------------------------------------------------------T
T ss_pred cEEEEEEEEccCceEEEEEEe----------------------------------------------------------c
Confidence 999999999999999999973 1
Q ss_pred ccceeeeEEEeeeccCCCCHHHHHHHHHHHHHHhhcchhHHHHHHHhhhHHHHHHHHHHHh
Q 005222 555 KAGRRLDISISETIYGGMTKPELALAQETENLLAQQDITMEQTKDKKNALESYVYEMRNKL 615 (708)
Q Consensus 555 ~~~~~~~l~i~~~~~~~ls~~e~~~~~~~~~~~~~~D~~~~~~~~a~N~LEs~iy~~r~~l 615 (708)
.+++...++|+... ++||++|++++++++.+|..+|+.++++.++||+||+|+|.+|+.|
T Consensus 494 ~tg~~~~~~i~~~~-~~ls~~~i~~~~~~~~~~~~~d~~~~~~~~~~n~~e~~~~~~~~~l 553 (554)
T 1yuw_A 494 STGKENKITITNDK-GRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATV 553 (554)
T ss_dssp TTCCEEEEEECCCS-SCSCHHHHHHHHHHHHHTTTHHHHHTTSSCSCEECSSCCSCSCCCC
T ss_pred cCCCceeEEEecCC-CCCCHHHHHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 22334567776554 6799999999999999999999999999999999999999998766
No 5
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=100.00 E-value=4.3e-82 Score=708.73 Aligned_cols=499 Identities=29% Similarity=0.475 Sum_probs=447.7
Q ss_pred eEEEEEccccceEEEEEeCCceEEEeCCCCCccceEEEEEcCCcEEEcHHHHHhHhcCCcchHHHHHHhhCCCCCChHHH
Q 005222 2 SVVGFDIGNENCVIATVKHRGVDVLLNEESNRETPSIVCFGEKQRFIGAAGYASAMMHPKSTVSQVKRLIGRRYGDPVVQ 81 (708)
Q Consensus 2 ~vvGID~GTt~s~va~~~~~~~~ii~~~~g~r~~Ps~v~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~llg~~~~~~~v~ 81 (708)
.+||||||||||+||++.++.++++.|+.|++++||+|+|.+++++||..|..+...+| ++++++||+||+++.
T Consensus 3 ~~iGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~~~~~~vG~~A~~~~~~~p-~~~~~~Kr~lg~p~~----- 76 (509)
T 2v7y_A 3 KIIGIDLGTTNSCVAVLEGGEVKVIPNPEGNRTTPSVVAFKNGERLVGEVAKRQAITNP-NTIISIKRHMGTDYK----- 76 (509)
T ss_dssp CEEEEEECSSEEEEEEEETTEEEECCCTTSCSSEECEEEESSSSEEESHHHHTTTTTCS-SEEECGGGTTTSCCC-----
T ss_pred CEEEEEcCCceEEEEEEECCEEEEEECCCCCcccceEEEECCCcEEECHHHHHhHHhCC-CcHHHHHHhcCCCcE-----
Confidence 48999999999999999999999999999999999999998888999999999999999 999999999998432
Q ss_pred hhhccCCceeeecCCCCeEEEEEecCceeeecHHHHHHHHHHHHHHHHHhhcCCCcceEEEEecCCCCHHHHHHHHHHHH
Q 005222 82 KDLMVLPFESCESPDGGISIKLKYLGETHTFCPVQVMGMLFSHLKDVAEKNLEMPVVDCVIGVPSYFTDLQRREYLNAAS 161 (708)
Q Consensus 82 ~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~el~a~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~l~~Aa~ 161 (708)
+ ...| +.++|+++++++|++|+..++.+++.++.++|||||++|++.||+++++|++
T Consensus 77 ---------~------------~~~g--~~~~~~ei~a~~L~~l~~~ae~~l~~~~~~~VitvPa~~~~~qr~a~~~a~~ 133 (509)
T 2v7y_A 77 ---------V------------EIEG--KQYTPQEISAIILQYLKSYAEDYLGEPVTRAVITVPAYFNDAQRQATKDAGR 133 (509)
T ss_dssp ---------E------------EETT--EEECHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHHHHHH
T ss_pred ---------E------------EECC--EEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHHHH
Confidence 1 1122 4689999999999999999999999999999999999999999999999999
Q ss_pred HcCCcceeeecchHHHHHhccccccCCCCCCceEEEEEEeCCcceEEEEEEEeCCeEEEEEEeCCCCcchHHHHHHHHHH
Q 005222 162 IAGLRPLRLIHDCTATALGYGIYKTDFANGGKSYIAFVDIGHSDTQVSIVSFEAGHMKVLSHAFDSSLGGRDFDDVLFGY 241 (708)
Q Consensus 162 ~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~Gggt~dvsv~~~~~~~~~v~~~~~~~~lGG~~id~~l~~~ 241 (708)
.||++++++++||+|||++|+... ..+..+||||+||||||++++++.++.++++++.++.++||++||+.|++|
T Consensus 134 ~AGl~~~~li~Ep~AAAlay~~~~-----~~~~~vlV~D~GgGT~Dvsv~~~~~g~~~v~a~~g~~~lGG~d~d~~l~~~ 208 (509)
T 2v7y_A 134 IAGLEVERIINEPTAAALAYGLDK-----EEDQTILVYDLGGGTFDVSILELGDGVFEVKATAGDNHLGGDDFDQVIIDY 208 (509)
T ss_dssp HTTCEEEEEEEHHHHHHHHTTGGG-----SCSEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHHH
T ss_pred HcCCCeEEEecCHHHHHHHHhhcc-----CCCCEEEEEECCCCeEEEEEEEEcCCeEEEEEecCCCCcCHHHHHHHHHHH
Confidence 999999999999999999999765 357899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcccccCCHHHHHHHHHHHHHhhhhcCCCCeeeEEeccccC---C-cceEEEeCHHHHHHHhhhhhHHHHHH
Q 005222 242 FAAKFKEQYKINVYSNVRACIRLRAACEKLKKVLSANAEAPLNIECLMD---E-KDVRGFIKREEFEELASGLTEKIAIP 317 (708)
Q Consensus 242 l~~~~~~~~~~~~~~~~~~~~rL~~~~e~~K~~Ls~~~~~~i~i~~l~~---~-~d~~~~itr~~fe~~~~~~~~~i~~~ 317 (708)
+.++|+.+++.++..+++++.+|+.+||++|+.||......+.++.+++ | .++.+.|+|++|+++++|+++++..+
T Consensus 209 l~~~~~~~~~~~~~~~~~~~~~l~~~aE~~K~~ls~~~~~~i~l~~~~~~~~G~~~~~~~itr~~fe~l~~~~~~~i~~~ 288 (509)
T 2v7y_A 209 LVNQFKQEHGIDLSKDKMALQRLKDAAEKAKKELSGVTQTQISLPFISANENGPLHLEMTLTRAKFEELSAHLVERTMGP 288 (509)
T ss_dssp HHHHHHHHHSCCGGGCHHHHHHHHHHHHHHHHHTTTCSEEEEEEEEEEEETTEEEEEEEEEEHHHHHHHTHHHHHTTHHH
T ss_pred HHHHHHHHhCCCcccCHHHHHHHHHHHHHHHHhcCCCCcEEEEEeccccCCCCCeeEEEEEEHHHHHHHHHHHHHHHHHH
Confidence 9999999999888889999999999999999999999888888887654 2 46778999999999999999999999
Q ss_pred HHHHHHHcCCCCCCccEEEEecCCCChHHHHHHHHhHhCCCCCCCCCchhhHhchHHHHHHHhCCCccccceEEeeccce
Q 005222 318 CRKALADAGLHVDKIHSVEIVGSGSRIPAITRLLTSLFGREPRRSLNASECVARGCALQCAMLSPAFRVREYEVQDCNPY 397 (708)
Q Consensus 318 i~~~l~~~~~~~~~i~~ViLvGG~srip~v~~~l~~~fg~~v~~~~n~~eava~GAa~~a~~~~~~~~~~~~~~~d~~~~ 397 (708)
++++|+++++...+|+.|+||||+|++|+|+++|++.||.++....||++|||+|||++|+.+++. ++++.+.|++|+
T Consensus 289 i~~~L~~a~~~~~~i~~VvLvGG~s~~p~v~~~l~~~f~~~~~~~~~p~~aVa~Gaa~~a~~l~~~--~~~~~~~dv~p~ 366 (509)
T 2v7y_A 289 VRQALQDAGLTPADIDKVILVGGSTRIPAVQEAIKRELGKEPHKGVNPDEVVAIGAAIQGGVIAGE--VKDVVLLDVTPL 366 (509)
T ss_dssp HHHHHHHHTCCGGGCSEEEEESGGGGCHHHHHHHHHHHSSCCBCCSCTTTHHHHHHHHHHHHHHTC--CCCCCCCCBCSS
T ss_pred HHHHHHHcCCChhHCcEEEEECCcccChHHHHHHHHHhCCCcCcCCCchhhhHhhHHHHHHHhcCC--ccCceEEEeecc
Confidence 999999999998999999999999999999999999999889999999999999999999999875 578899999999
Q ss_pred eeEEEecCCCcccCCCcceEEecCCCCcCceEEEEeeeccc----eEEEEEEeCCCCCCCCCCccceeEEeCCCCCCCCC
Q 005222 398 SIGISSDEGPICIGSNTNGEVFPKGQPIPCVKVLTLQRSSL----FHLELFYTNPNELPPGISSKVSCFTIGPFQGSNSE 473 (708)
Q Consensus 398 ~i~i~~~~~~~~~~~~~~~~l~~~~~~~P~~k~~~~~~~~~----~~i~~~~~~~~~~~~~~~~~ig~~~i~~i~~~~~~ 473 (708)
+||+++.+ +.+.+||+||+++|++++.+|++..| +.|.++++ ++....+|..||+|.|.++|+++.|
T Consensus 367 slgi~~~~-------~~~~~li~~~~~iP~~~~~~f~~~~d~q~~~~i~v~~g--e~~~~~~~~~lg~~~l~~i~~~~~g 437 (509)
T 2v7y_A 367 SLGIETMG-------GVFTKLIERNTTIPTSKSQVFTTAADNQTTVDIHVLQG--ERPMAADNKSLGRFQLTGIPPAPRG 437 (509)
T ss_dssp EEEEEETT-------TEEEEEECTTCBSSEEEEEEECCSSTTCCEEEEEEEEE--SSSBGGGSEEEEEEEEECCCCCCTT
T ss_pred ccceeecC-------CceEEEEeCCCcCCcceEEEEEeeccCcEEEEEEEEec--CccccccCcEEEEEEEeCCCCCCCc
Confidence 99999986 47899999999999999999987543 55666554 3334578999999999999999989
Q ss_pred cceeEEEEEEcCCeeEEEEEeeeeeccCCCCcccccccccccccccccccCCCCCccccccccccccccCCCCccccccc
Q 005222 474 NAKVKVTVKLNLHGIVSVESAWLIEGHGDDPVTKHNARSKMDKMESEGVSIDSSTTVEDVQDSASVQSKSSHSSAVSVVR 553 (708)
Q Consensus 474 ~~~i~v~~~ld~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 553 (708)
.++|+|+|.+|.||+|+|++.+
T Consensus 438 ~~~i~v~f~id~~gil~v~a~~---------------------------------------------------------- 459 (509)
T 2v7y_A 438 VPQIEVTFDIDANGIVHVRAKD---------------------------------------------------------- 459 (509)
T ss_dssp CSCEEEEEEECTTSCEEEEEEE----------------------------------------------------------
T ss_pred ccEEEEEEEEcCCceEEEEEEE----------------------------------------------------------
Confidence 8999999999999999999963
Q ss_pred cccceeeeEEEeeeccCCCCHHHHHHHHHHHHHHhhcchhHHHHHHHhhhHH
Q 005222 554 DKAGRRLDISISETIYGGMTKPELALAQETENLLAQQDITMEQTKDKKNALE 605 (708)
Q Consensus 554 k~~~~~~~l~i~~~~~~~ls~~e~~~~~~~~~~~~~~D~~~~~~~~a~N~LE 605 (708)
+.+++...++|+.. .+||+++++++.+++.+|..+|+..+++.++||+||
T Consensus 460 ~~~g~~~~~~i~~~--~~l~~~~i~~~~~~~~~~~~~d~~~~~~~~~~~~~e 509 (509)
T 2v7y_A 460 LGTNKEQSITIKSS--SGLSEEEIQRMIKEAEENAEADRKRKEAAELRNEAD 509 (509)
T ss_dssp TTTCCEEEEEECSS--CSCCSHHHHHHHHHHHHSCGGGGGGGGCCCC-----
T ss_pred cCCCcEEEEEEEec--CCCCHHHHHHHHHHHHHhhhccHHHHHHHHHHhhcC
Confidence 22334456777665 569999999999999999999999999999999997
No 6
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=100.00 E-value=3.8e-65 Score=558.00 Aligned_cols=380 Identities=38% Similarity=0.634 Sum_probs=360.9
Q ss_pred CeEEEEEccccceEEEEEeCCceEEEeCCCCCccceEEEEEcCCcEEEcHHHHHhHhcCCcchHHHHHHhhCCCCCChHH
Q 005222 1 MSVVGFDIGNENCVIATVKHRGVDVLLNEESNRETPSIVCFGEKQRFIGAAGYASAMMHPKSTVSQVKRLIGRRYGDPVV 80 (708)
Q Consensus 1 M~vvGID~GTt~s~va~~~~~~~~ii~~~~g~r~~Ps~v~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~llg~~~~~~~v 80 (708)
|.+||||||||||+||++.++.++++.|+.|++++||+|+|.+++++||..|..+..++|.++++++||++|+.++++.+
T Consensus 23 ~~viGID~GTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~vG~~A~~~~~~~~~~~~~~~Kr~lg~~~~~~~~ 102 (404)
T 3i33_A 23 MPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTIFDAKRLIGRKFEDATV 102 (404)
T ss_dssp CCCEEEEECSSEEEEEEEETTEEEECCCTTSCSSEECCEEECSSCEEETHHHHHTTTTCSTTEECCGGGTTTCCTTSHHH
T ss_pred CCEEEEEcCCccEEEEEEECCeeEEEECCCCCcccceEEEECCCCEEecHHHHHhhHhChhhhHHHHHHHhCCCCCcHHH
Confidence 67999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhccCCceeeecCCCCeEEEEEecCceeeecHHHHHHHHHHHHHHHHHhhcCCCcceEEEEecCCCCHHHHHHHHHHH
Q 005222 81 QKDLMVLPFESCESPDGGISIKLKYLGETHTFCPVQVMGMLFSHLKDVAEKNLEMPVVDCVIGVPSYFTDLQRREYLNAA 160 (708)
Q Consensus 81 ~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~el~a~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~l~~Aa 160 (708)
+...+.+||.+.. .+|...+.+.+.++...++|+++++++|+++++.++.+++.++.++|||||++|++.||+++++|+
T Consensus 103 ~~~~~~~p~~~~~-~~g~~~~~v~~~~~~~~~~~~ei~a~~L~~l~~~a~~~~~~~~~~~vitvPa~~~~~~r~~~~~a~ 181 (404)
T 3i33_A 103 QSDMKHWPFRVVS-EGGKPKVQVEYKGETKTFFPEEISSMVLTKMKEIAEAYLGGKVHSAVITVPAYFNDSQRQATKDAG 181 (404)
T ss_dssp HHHHTTCSSEEEE-ETTEEEEEEEETTEEEEECHHHHHHHHHHHHHHHHHHHHSSCCCEEEEEECTTCCHHHHHHHHHHH
T ss_pred HHHHhhCCceEEc-cCCceEEEEEeCCCceEEcHHHHHHHHHHHHHHHHHHHhccCCCcEEEEECCCCCHHHHHHHHHHH
Confidence 9999999999987 478889999988888899999999999999999999999999999999999999999999999999
Q ss_pred HHcCCcceeeecchHHHHHhccccccCCCCCCceEEEEEEeCCcceEEEEEEEeCCeEEEEEEeCCCCcchHHHHHHHHH
Q 005222 161 SIAGLRPLRLIHDCTATALGYGIYKTDFANGGKSYIAFVDIGHSDTQVSIVSFEAGHMKVLSHAFDSSLGGRDFDDVLFG 240 (708)
Q Consensus 161 ~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~Gggt~dvsv~~~~~~~~~v~~~~~~~~lGG~~id~~l~~ 240 (708)
+.||++++.+++||+|||++|+..... ....+..+||||+||||||++++++.++.++++++.++..+||.+||+.|++
T Consensus 182 ~~AGl~~~~li~Ep~AAa~~~~~~~~~-~~~~~~~vlV~D~GgGT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~l~~ 260 (404)
T 3i33_A 182 TITGLNVLRIINEPTAAAIAYGLDKKG-CAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVS 260 (404)
T ss_dssp HHHTCEEEEEEEHHHHHHHHTTTTSSC-SSSSCCEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHH
T ss_pred HHcCCCeEEEeccHHHHHHHHHhhccc-ccCCCceEEEEECCCCcEEEEEEEEeCCeEEEEEEeCCCCCCHHHHHHHHHH
Confidence 999999999999999999999876531 1125789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcccccCCHHHHHHHHHHHHHhhhhcCCCCeeeEEeccccCCcceEEEeCHHHHHHHhhhhhHHHHHHHHH
Q 005222 241 YFAAKFKEQYKINVYSNVRACIRLRAACEKLKKVLSANAEAPLNIECLMDEKDVRGFIKREEFEELASGLTEKIAIPCRK 320 (708)
Q Consensus 241 ~l~~~~~~~~~~~~~~~~~~~~rL~~~~e~~K~~Ls~~~~~~i~i~~l~~~~d~~~~itr~~fe~~~~~~~~~i~~~i~~ 320 (708)
++.++|..+++.++..+++.+.+|+.+||++|+.||......+.++.++++.++.+.|+|++|+++++++++++..++.+
T Consensus 261 ~l~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~~~~~~~~~g~~~~~~i~r~~~~~~~~~~~~~i~~~i~~ 340 (404)
T 3i33_A 261 HLAEEFKRKHKKDIGPNKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSITRARFEELNADLFRGTLEPVEK 340 (404)
T ss_dssp HHHHHHHHHHSCCCTTCHHHHHHHHHHHHHHHHHTTTSSEEEEEEEEEETTEEEEEEEEHHHHHHHTHHHHHHTHHHHHH
T ss_pred HHHHHHHHHhCCCcCCCHHHHHHHHHHHHHHHHhCCcCcceEEEEeeccCCceeEEEEcHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999998889999999999999999999999999999999
Q ss_pred HHHHcCCCCCCccEEEEecCCCChHHHHHHHHhHh-CCCCCCCCCchhhHhchHHHHHHHhCC
Q 005222 321 ALADAGLHVDKIHSVEIVGSGSRIPAITRLLTSLF-GREPRRSLNASECVARGCALQCAMLSP 382 (708)
Q Consensus 321 ~l~~~~~~~~~i~~ViLvGG~srip~v~~~l~~~f-g~~v~~~~n~~eava~GAa~~a~~~~~ 382 (708)
+|+.+++...+|+.|+||||+|++|+|+++|++.| +.++..+.||++|||+|||++|+++++
T Consensus 341 ~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~~l~~ 403 (404)
T 3i33_A 341 ALRDAKLDKGQIQEIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILIG 403 (404)
T ss_dssp HHHHHTCCGGGCCEEEEESGGGGCHHHHHHHHHHTTTCCCBCSSCTTTHHHHHHHHHHHHHC-
T ss_pred HHHHcCCCHhhCCEEEEECCccccHHHHHHHHHHcCCCCCCCCcCHHHHHHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999 788999999999999999999999874
No 7
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=100.00 E-value=1.6e-63 Score=543.51 Aligned_cols=374 Identities=36% Similarity=0.608 Sum_probs=357.9
Q ss_pred EEEEEccccceEEEEEeCCceEEEeCCCCCccceEEEEEcCCcEEEcHHHHHhHhcCCcchHHHHHHhhCCCCCChHHHh
Q 005222 3 VVGFDIGNENCVIATVKHRGVDVLLNEESNRETPSIVCFGEKQRFIGAAGYASAMMHPKSTVSQVKRLIGRRYGDPVVQK 82 (708)
Q Consensus 3 vvGID~GTt~s~va~~~~~~~~ii~~~~g~r~~Ps~v~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~llg~~~~~~~v~~ 82 (708)
+||||||||||++|++.++.++++.|+.|++++||+|+|.++++++|..|......+|.++++++|+++|+.++++.++.
T Consensus 20 viGID~GTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~vG~~A~~~~~~~~~~~~~~~k~~lg~~~~~~~~~~ 99 (394)
T 3qfu_A 20 VIGIDLGTTYSCVAVMKNGKTEILANEQGNRITPSYVAFTDDERLIGDAAKNQVAANPQNTIFDIKRLIGLKYNDRSVQK 99 (394)
T ss_dssp CEEEEECSSEEEEEEECSSCEEECCCTTSCSSEECCEEECSSCEEESHHHHHTGGGCGGGEECCGGGTTTCCTTCHHHHH
T ss_pred EEEEEeCcCcEEEEEEECCeeEEEECCCCCEeeceEEEEeCCcEEecHHHHHhhHhCcccCHHHHHHHhCCCCCcHHHHH
Confidence 69999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhccCCceeeecCCCCeEEEEEecCceeeecHHHHHHHHHHHHHHHHHhhcCCCcceEEEEecCCCCHHHHHHHHHHHHH
Q 005222 83 DLMVLPFESCESPDGGISIKLKYLGETHTFCPVQVMGMLFSHLKDVAEKNLEMPVVDCVIGVPSYFTDLQRREYLNAASI 162 (708)
Q Consensus 83 ~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~el~a~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~l~~Aa~~ 162 (708)
..+.+||.+. ..+|...+.+.+.++.+.++|+++++++|++|++.++.+++.++.++|||||++|++.||+++++|++.
T Consensus 100 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ei~a~~l~~l~~~a~~~~~~~~~~~vitvP~~~~~~~r~~~~~a~~~ 178 (394)
T 3qfu_A 100 DIKHLPFNVV-NKDGKPAVEVSVKGEKKVFTPEEISGMILGKMKQIAEDYLGTKVTHAVVTVPAYFNDAQRQATKDAGTI 178 (394)
T ss_dssp HHTTCSSEEE-EETTEEEEEEESSSSEEEECHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHHHHHHH
T ss_pred HhhcCCeEEE-cCCCceEEEEEeCCCceEEcHHHHHHHHHHHHHHHHHHhcCCCcceEEEEECCCCCHHHHHHHHHHHHH
Confidence 9999999988 557888888888888889999999999999999999999999999999999999999999999999999
Q ss_pred cCCcceeeecchHHHHHhccccccCCCCCCceEEEEEEeCCcceEEEEEEEeCCeEEEEEEeCCCCcchHHHHHHHHHHH
Q 005222 163 AGLRPLRLIHDCTATALGYGIYKTDFANGGKSYIAFVDIGHSDTQVSIVSFEAGHMKVLSHAFDSSLGGRDFDDVLFGYF 242 (708)
Q Consensus 163 AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~Gggt~dvsv~~~~~~~~~v~~~~~~~~lGG~~id~~l~~~l 242 (708)
||++++.+++||+|||++|+.... ..+..+||||+||||||++++++.++.++++++.++.++||.+||+.|++++
T Consensus 179 aGl~~~~li~Ep~Aaa~~~~~~~~----~~~~~vlV~D~Gggt~dvsv~~~~~~~~~~~~~~~~~~lGG~~~d~~l~~~l 254 (394)
T 3qfu_A 179 AGLNVLRIVNEPTAAAIAYGLDKS----DKEHQIIVYDLGGGTFDVSLLSIENGVFEVQATSGDTHLGGEDFDYKIVRQL 254 (394)
T ss_dssp TTCEEEEEEEHHHHHHHHTTTTSC----SSCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHHHH
T ss_pred cCCceEEEecCHHHHHHHHhhccC----CCCceEEEEEcCCCceeEEEEEEeCCEEEEEEEcCCCCCChHHHHHHHHHHH
Confidence 999999999999999999987643 3578999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcccccCCHHHHHHHHHHHHHhhhhcCCCCeeeEEeccccCCcceEEEeCHHHHHHHhhhhhHHHHHHHHHHH
Q 005222 243 AAKFKEQYKINVYSNVRACIRLRAACEKLKKVLSANAEAPLNIECLMDEKDVRGFIKREEFEELASGLTEKIAIPCRKAL 322 (708)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~rL~~~~e~~K~~Ls~~~~~~i~i~~l~~~~d~~~~itr~~fe~~~~~~~~~i~~~i~~~l 322 (708)
.++|..+++.++..+++.+.+|+.+||++|+.||......+.++.+.++.++.+.|+|++|+++++++++++..++.++|
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~~~~~~~~~~~~~~~~i~r~~~~~~~~~~~~~i~~~i~~~l 334 (394)
T 3qfu_A 255 IKAFKKKHGIDVSDNNKALAKLKREAEKAKRALSSQMSTRIEIDSFVDGIDLSETLTRAKFEELNLDLFKKTLKPVEKVL 334 (394)
T ss_dssp HHHHHHHHSCCCTTCHHHHHHHHHHHHHHHHHTTTCSEEEEEEEEEETTEEEEEEEEHHHHHHHHHHHHHHTHHHHHHHH
T ss_pred HHHHHHHcCCCCCcCHHHHHHHHHHHHHHHHHcccCCcEEEEEEeccCCceeEEEEEHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999888999999999999999999999999999999999
Q ss_pred HHcCCCCCCccEEEEecCCCChHHHHHHHHhHh-CCCCCCCCCchhhHhchHHHHHHHhC
Q 005222 323 ADAGLHVDKIHSVEIVGSGSRIPAITRLLTSLF-GREPRRSLNASECVARGCALQCAMLS 381 (708)
Q Consensus 323 ~~~~~~~~~i~~ViLvGG~srip~v~~~l~~~f-g~~v~~~~n~~eava~GAa~~a~~~~ 381 (708)
+.+++...+|+.|+|+||+|++|+|+++|++.| +.++..+.||++|||+|||++|++++
T Consensus 335 ~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~~ls 394 (394)
T 3qfu_A 335 QDSGLEKKDVDDIVLVGGSTRIPKVQQLLESYFDGKKASKGINPDEAVAYGAAVQAGVLS 394 (394)
T ss_dssp HHHTCCGGGCCEEEEESGGGGSHHHHHHHHHHTTTCCCBCCSCTTTHHHHHHHHHHHHHC
T ss_pred HHcCCCHHHCCEEEEECCccccHHHHHHHHHHcCCCCCCCCcCHHHHHHHHHHHHHHhhC
Confidence 999999889999999999999999999999999 78999999999999999999999875
No 8
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=100.00 E-value=2e-63 Score=545.02 Aligned_cols=378 Identities=25% Similarity=0.384 Sum_probs=344.8
Q ss_pred CeEEEEEccccceEEEEEeCCceEEEeCCCCCccceEEEEEcCCcEEEcHHHHHhHhcCCcchHHHHHHhhCCCCCChHH
Q 005222 1 MSVVGFDIGNENCVIATVKHRGVDVLLNEESNRETPSIVCFGEKQRFIGAAGYASAMMHPKSTVSQVKRLIGRRYGDPVV 80 (708)
Q Consensus 1 M~vvGID~GTt~s~va~~~~~~~~ii~~~~g~r~~Ps~v~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~llg~~~~~~~v 80 (708)
|.+||||||||||+||++.+++++++.|+.|++++||+|+|.+++++||..|..+..++|.++++++|+++|+.++++.+
T Consensus 13 ~~vvGIDlGTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~~G~~A~~~~~~~~~~~i~~~K~llg~~~~~~~~ 92 (409)
T 4gni_A 13 RVVIGITFGNSNSSIAHTVDDKAEVIANEDGDRQIPTILSYVDGDEYYGQQAKNFLVRNPKNTVAYFRDILGQDFKSVDP 92 (409)
T ss_dssp CCEEEEEECSSEEEEEEEETTEEEEECCTTSCSSEECEEEEETTEEEEHHHHHHHHHHCGGGEEESCGGGTTCCGGGCCC
T ss_pred CcEEEEEcCCCeEEEEEEeCCceEEEECCCCCccCceEEEECCCcEEEcHHHHHhhHhChHhhHHHHHHHhCCCccchhh
Confidence 36999999999999999988899999999999999999999999999999999999999999999999999999887655
Q ss_pred HhhhccCCceeeecCCCCeEEEEEec----CceeeecHHHHHHHHHHHHHHHHHhhcCCCcceEEEEecCCCCHHHHHHH
Q 005222 81 QKDLMVLPFESCESPDGGISIKLKYL----GETHTFCPVQVMGMLFSHLKDVAEKNLEMPVVDCVIGVPSYFTDLQRREY 156 (708)
Q Consensus 81 ~~~~~~~~~~~~~~~~g~~~~~v~~~----~~~~~~~~~el~a~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~l 156 (708)
+.. .+++.+.. .+|.+.+.+... +..+.++++++++++|++|++.++.+++.++.++|||||++|++.||+++
T Consensus 93 ~~~--~~~~~~~~-~~g~~~~~v~~~~~~~~~~~~~~~~ev~~~~L~~l~~~a~~~~~~~~~~~vitvPa~~~~~~r~~~ 169 (409)
T 4gni_A 93 THN--HASAHPQE-AGDNVVFTIKDKAEEDAEPSTLTVSEIATRYLRRLVGAASEYLGKKVTSAVITIPTNFTEKQKAAL 169 (409)
T ss_dssp GGG--TTSCCCEE-ETTEEEEEECCSSCSSCCCEEEEHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHH
T ss_pred hhh--ccccceec-CCCcEEEEEecCCCCCCcceEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHH
Confidence 443 33444433 378888888765 35678999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCcceeeecchHHHHHhccccccCCCCCCceEEEEEEeCCcceEEEEEEEeCCeEEEEEEeCCCCcchHHHHH
Q 005222 157 LNAASIAGLRPLRLIHDCTATALGYGIYKTDFANGGKSYIAFVDIGHSDTQVSIVSFEAGHMKVLSHAFDSSLGGRDFDD 236 (708)
Q Consensus 157 ~~Aa~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~Gggt~dvsv~~~~~~~~~v~~~~~~~~lGG~~id~ 236 (708)
++|++.|||+++.+++||+|||++|+.... ....+..+||||+||||||++++++.++.++++++.++..+||.+||+
T Consensus 170 ~~a~~~AGl~~~~li~Ep~AAa~~~~~~~~--~~~~~~~vlv~D~GgGT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~ 247 (409)
T 4gni_A 170 IAAAAAADLEVLQLISEPAAAVLAYDARPE--ATISDKIIVVADLGGSRSDVTVLASRSGMYTILATVHDYEYHGIALDK 247 (409)
T ss_dssp HHHHHHTTCEEEEEEEHHHHHHHHTTC--------CCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEESSSSHHHHHH
T ss_pred HHHHHHcCCCeEEEEcCHHHHHHHHhcccc--cCCCCCEEEEEECCCCceEEEEEEEeCCeEEEEEecCCCCcCHHHHHH
Confidence 999999999999999999999999987542 125678999999999999999999999999999999899999999999
Q ss_pred HHHHHHHHHHHHhhc--ccccCCHHHHHHHHHHHHHhhhhcCCCCeeeEEeccccCCcceEEEeCHHHHHHHhhhhhHHH
Q 005222 237 VLFGYFAAKFKEQYK--INVYSNVRACIRLRAACEKLKKVLSANAEAPLNIECLMDEKDVRGFIKREEFEELASGLTEKI 314 (708)
Q Consensus 237 ~l~~~l~~~~~~~~~--~~~~~~~~~~~rL~~~~e~~K~~Ls~~~~~~i~i~~l~~~~d~~~~itr~~fe~~~~~~~~~i 314 (708)
.|++++..+|..+++ .++..+++.+.+|+.+||++|+.||.+....+.++++.++.++.+.|||++|+++++++++++
T Consensus 248 ~i~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~i~i~~~~~~~~~~~~itr~~~~~~~~~~~~~i 327 (409)
T 4gni_A 248 VLIDHFSKEFLKKNPGAKDPRENPRSLAKLRLEAESTKRALSRSTNASFSVESLIDGLDFASTINRLRYETIARTVFEGF 327 (409)
T ss_dssp HHHHHHHHHHHHHSTTCCCGGGSHHHHHHHHHHHHHHHHHHHHSSEEEEEEEEEETTEEEEEEEEHHHHHHHTHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCCcccCHHHHHHHHHHHHHHHHhCCCCCceEEEeecccCCcceEEEeeHHHHHHHHHHHHHHH
Confidence 999999999998888 888889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCCccEEEEecCCCChHHHHHHHHhHhCCC--C------CCCCCchhhHhchHHHHHHHhCCC
Q 005222 315 AIPCRKALADAGLHVDKIHSVEIVGSGSRIPAITRLLTSLFGRE--P------RRSLNASECVARGCALQCAMLSPA 383 (708)
Q Consensus 315 ~~~i~~~l~~~~~~~~~i~~ViLvGG~srip~v~~~l~~~fg~~--v------~~~~n~~eava~GAa~~a~~~~~~ 383 (708)
..+|+++|+.+++...+|+.|+||||+|++|+|+++|++.||.+ + ....||++|||+|||++|+.....
T Consensus 328 ~~~i~~~l~~~~~~~~~i~~V~LvGG~s~~p~v~~~l~~~f~~~~~v~~P~~~~~~~~p~~ava~GAa~~~~~~~~~ 404 (409)
T 4gni_A 328 NRLVESAVKKAGLDPLDVDEVIMSGGTSNTPRIAANFRYIFPESTRILAPSTDPSALNPSELQARGAALQASLIQEH 404 (409)
T ss_dssp HHHHHHHHHHTTCCGGGCCEEEEESGGGGCHHHHHHHHHHSCTTSEEESTTTCTTCCCTTTHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEECCccccHHHHHHHHHHcCCccccccccccCCCcCHHHHHHHHHHHHhhhhhhh
Confidence 99999999999999999999999999999999999999999865 3 578999999999999999987654
No 9
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=100.00 E-value=1.9e-61 Score=524.99 Aligned_cols=372 Identities=34% Similarity=0.577 Sum_probs=342.4
Q ss_pred eEEEEEccccceEEEEEeCCceEEEeCCCCCccceEEEEEcC-CcEEEcHHHHHhHhcCCcchHHHHHHhhCCCCCChHH
Q 005222 2 SVVGFDIGNENCVIATVKHRGVDVLLNEESNRETPSIVCFGE-KQRFIGAAGYASAMMHPKSTVSQVKRLIGRRYGDPVV 80 (708)
Q Consensus 2 ~vvGID~GTt~s~va~~~~~~~~ii~~~~g~r~~Ps~v~~~~-~~~~~G~~A~~~~~~~~~~~~~~~k~llg~~~~~~~v 80 (708)
.+||||||||||+||++.++.++++.|+.|++++||+|+|.. ++++||..|......+|.++++++|++||+.++++.+
T Consensus 3 ~~vGIDlGTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~~lg~~~~~~~~ 82 (383)
T 1dkg_D 3 KIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEV 82 (383)
T ss_dssp CCCEEECCSSEEEEEEEETTEEEECCCTTSCSEEECEEEECTTSCEEESHHHHTTSTTCGGGEEECGGGTTTCBSCSHHH
T ss_pred cEEEEEcCCCCEEEEEEECCeeEEEECCCCCcccceEEEEECCCCEEECHHHHHhhhhCccceeehhHHhhCCCCCcHHH
Confidence 489999999999999999999999999999999999999964 6789999999999999999999999999999999999
Q ss_pred HhhhccCCceeeecCCCCeEEEEEecCceeeecHHHHHHHHHHHHHHHHHhhcCCCcceEEEEecCCCCHHHHHHHHHHH
Q 005222 81 QKDLMVLPFESCESPDGGISIKLKYLGETHTFCPVQVMGMLFSHLKDVAEKNLEMPVVDCVIGVPSYFTDLQRREYLNAA 160 (708)
Q Consensus 81 ~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~el~a~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~l~~Aa 160 (708)
+...+.+||.++...+|.+.+.+ .| +.++|+++++++|+++++.++.+++.++.++|||||++|++.||+++++|+
T Consensus 83 ~~~~~~~p~~~~~~~~~~~~~~~--~g--~~~~~~~i~~~~L~~l~~~a~~~~~~~~~~~vitvP~~~~~~~r~~~~~a~ 158 (383)
T 1dkg_D 83 QRDVSIMPFKIIAADNGDAWVEV--KG--QKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAG 158 (383)
T ss_dssp HHHTTTCSSEEEECSSSBEEEEE--TT--EEECHHHHHHHHHHHHHHHHHHHHSSCCCEEEECBCTTCCHHHHHHHHHHH
T ss_pred HHHhhcCCeEEEEcCCCcEEEEE--CC--EEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHHH
Confidence 88888999999888788877766 34 579999999999999999999999988999999999999999999999999
Q ss_pred HHcCCcceeeecchHHHHHhccccccCCCCCCceEEEEEEeCCcceEEEEEEEe----CCeEEEEEEeCCCCcchHHHHH
Q 005222 161 SIAGLRPLRLIHDCTATALGYGIYKTDFANGGKSYIAFVDIGHSDTQVSIVSFE----AGHMKVLSHAFDSSLGGRDFDD 236 (708)
Q Consensus 161 ~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~Gggt~dvsv~~~~----~~~~~v~~~~~~~~lGG~~id~ 236 (708)
+.||++++.+++||+|||++|+.... ..+..+||||+||||||+++++.. ++.++++++.++..+||++||+
T Consensus 159 ~~aGl~~~~li~Ep~Aaa~~~~~~~~----~~~~~~lVvD~Gggttdvsv~~~~~~~~~~~~~v~~~~~~~~lGG~~id~ 234 (383)
T 1dkg_D 159 RIAGLEVKRIINEPTAAALAYGLDKG----TGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDS 234 (383)
T ss_dssp HHTTCEESCCCBHHHHHHHHHTCCC-----CCEEEEEEEEECSSCEEEEEEEEEC----CCCEEEEEEEESSCSHHHHHH
T ss_pred HHcCCceEEEeccHHHHHHHHHhccC----CCCcEEEEEEcCCCeEEEEEEEEEecCCCCeEEEEEEeCCCCCCHHHHHH
Confidence 99999999999999999999987542 257899999999999999999998 6788999988889999999999
Q ss_pred HHHHHHHHHHHHhhcccccCCHHHHHHHHHHHHHhhhhcCCCCeeeEEeccccC---C-cceEEEeCHHHHHHHhhhhhH
Q 005222 237 VLFGYFAAKFKEQYKINVYSNVRACIRLRAACEKLKKVLSANAEAPLNIECLMD---E-KDVRGFIKREEFEELASGLTE 312 (708)
Q Consensus 237 ~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~~e~~K~~Ls~~~~~~i~i~~l~~---~-~d~~~~itr~~fe~~~~~~~~ 312 (708)
.|++++.++|..+++.++..+++.+.+|+..||++|+.|+......+.++.+++ | .++.+.|+|++|+++++|+++
T Consensus 235 ~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~i~i~~~~~~~~G~~~~~~~it~~~~~~~~~~~~~ 314 (383)
T 1dkg_D 235 RLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVN 314 (383)
T ss_dssp HHHHHHHHHHHHHHCCCSTTCHHHHHHHHHHHHHHHHHTTSSSEEEEEEEEEEEETTEEEEEEEEEEHHHHHHHSHHHHH
T ss_pred HHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHHHHhCCCCceEEEEecccccCCCCeeEEEEEeHHHHHHHHHHHHH
Confidence 999999999999888888889999999999999999999998888888876553 2 456789999999999999999
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEEecCCCChHHHHHHHHhHhCCCCCCCCCchhhHhchHHHHHHHhC
Q 005222 313 KIAIPCRKALADAGLHVDKIHSVEIVGSGSRIPAITRLLTSLFGREPRRSLNASECVARGCALQCAMLS 381 (708)
Q Consensus 313 ~i~~~i~~~l~~~~~~~~~i~~ViLvGG~srip~v~~~l~~~fg~~v~~~~n~~eava~GAa~~a~~~~ 381 (708)
++..++.++|+.+++...+|+.|+|+||+|++|+|+++|++.||.++..+.||++|||+|||++|++++
T Consensus 315 ~i~~~i~~~l~~~~~~~~~i~~IvL~GG~s~~p~l~~~l~~~~~~~v~~~~~p~~ava~Gaa~~a~~l~ 383 (383)
T 1dkg_D 315 RSIELLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGVLT 383 (383)
T ss_dssp HHHHHHHHHHHTTTCCTTTCCEEEEESGGGGSHHHHHHHHHHHSSCCBCSSCTTTHHHHHHHHHTTTTC
T ss_pred HHHHHHHHHHHHcCCCHhhCCEEEEecCccccHHHHHHHHHHhCCCCCCCcChHHHHHHHHHHHHHhhC
Confidence 999999999999999888999999999999999999999999998898999999999999999998764
No 10
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=100.00 E-value=4.2e-41 Score=359.46 Aligned_cols=309 Identities=21% Similarity=0.310 Sum_probs=241.1
Q ss_pred eEEEEEccccceEEEEEeCCceEEEeCCCCCccceEEEEEcCC--cE-EEcHHHHHhHhcCCcchHHHHHHhhCCCCCCh
Q 005222 2 SVVGFDIGNENCVIATVKHRGVDVLLNEESNRETPSIVCFGEK--QR-FIGAAGYASAMMHPKSTVSQVKRLIGRRYGDP 78 (708)
Q Consensus 2 ~vvGID~GTt~s~va~~~~~~~~ii~~~~g~r~~Ps~v~~~~~--~~-~~G~~A~~~~~~~~~~~~~~~k~llg~~~~~~ 78 (708)
.+|||||||+||++++..++ .+. .+||+|+|..+ .+ ++|++|..+..++|.++..
T Consensus 4 ~~igIDlGT~~s~v~~~~~~---~~~------~~PS~v~~~~~~~~~~~vG~~A~~~~~~~~~~~~~------------- 61 (344)
T 1jce_A 4 KDIGIDLGTANTLVFLRGKG---IVV------NEPSVIAIDSTTGEILKVGLEAKNMIGKTPATIKA------------- 61 (344)
T ss_dssp CEEEEEECSSEEEEEETTTE---EEE------EEESCEEEETTTCCEEEESHHHHTTTTCCCTTEEE-------------
T ss_pred ceEEEEcCcCcEEEEECCCC---EEE------eeCcEEEEecCCCcEEEEcHHHHHhcccCCCCeEE-------------
Confidence 58999999999999875332 222 27999999865 34 7999998776666655421
Q ss_pred HHHhhhccCCceeeecCCCCeEEEEEecCceeee-cHHHHHHHHHHHHHHHHHhhcCCCcceEEEEecCCCCHHHHHHHH
Q 005222 79 VVQKDLMVLPFESCESPDGGISIKLKYLGETHTF-CPVQVMGMLFSHLKDVAEKNLEMPVVDCVIGVPSYFTDLQRREYL 157 (708)
Q Consensus 79 ~v~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~-~~~el~a~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~l~ 157 (708)
.+|++ +|.+ ..+ .+++++++++++++.. ..++ ...+|||||++|++.||++++
T Consensus 62 -------~~p~~-----~g~i----------~~~~~~~~i~~~~l~~~~~~--~~~~--~~~~vitvP~~~~~~~r~~~~ 115 (344)
T 1jce_A 62 -------IRPMR-----DGVI----------ADYTVALVMLRYFINKAKGG--MNLF--KPRVVIGVPIGITDVERRAIL 115 (344)
T ss_dssp -------ECCEE-----TTEE----------SSHHHHHHHHHHHHHHHHTS--CCSC--CCEEEEEECTTCCHHHHHHHH
T ss_pred -------EecCC-----CCee----------CChHHHHHHHHHHHHHHhhc--cccC--CCeEEEEECCCCCHHHHHHHH
Confidence 11221 2321 112 4677777777776542 1233 478999999999999999999
Q ss_pred HHHHHcCCcceeeecchHHHHHhccccccCCCCCCceEEEEEEeCCcceEEEEEEEeCCeEEEEEEeCCCCcchHHHHHH
Q 005222 158 NAASIAGLRPLRLIHDCTATALGYGIYKTDFANGGKSYIAFVDIGHSDTQVSIVSFEAGHMKVLSHAFDSSLGGRDFDDV 237 (708)
Q Consensus 158 ~Aa~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~Gggt~dvsv~~~~~~~~~v~~~~~~~~lGG~~id~~ 237 (708)
+|++.||++++.+++||+|||++|+... ..+..+||||+||||||++++... . ++. .++..+||++||+.
T Consensus 116 ~a~~~aG~~~~~li~ep~Aaa~~~~~~~-----~~~~~~lVvDiGggttdvsv~~~~--~--~~~-~~~~~lGG~~id~~ 185 (344)
T 1jce_A 116 DAGLEAGASKVFLIEEPMAAAIGSNLNV-----EEPSGNMVVDIGGGTTEVAVISLG--S--IVT-WESIRIAGDEMDEA 185 (344)
T ss_dssp HHHHHTTCSEEEEEEHHHHHHHHTTCCT-----TSSSCEEEEEECSSCEEEEEEETT--E--EEE-EEEESCSHHHHHHH
T ss_pred HHHHHcCCCeEeccCCHHHHHHhcCCCC-----CCCceEEEEEeCCCeEEEEEEEcC--C--EEe-eCCCCccChhHHHH
Confidence 9999999999999999999999998643 346789999999999999998764 2 222 34689999999999
Q ss_pred HHHHHHHHHHHhhcccccCCHHHHHHHHHHHHHhhhhcCCCCe------eeEEec--cccCCcceEEEeCHHHHHHHhhh
Q 005222 238 LFGYFAAKFKEQYKINVYSNVRACIRLRAACEKLKKVLSANAE------APLNIE--CLMDEKDVRGFIKREEFEELASG 309 (708)
Q Consensus 238 l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~~e~~K~~Ls~~~~------~~i~i~--~l~~~~d~~~~itr~~fe~~~~~ 309 (708)
|++++.+++ +.++. +..||++|+.|+.... ..+.++ .+.++.+..+.|+|++|+++++|
T Consensus 186 l~~~l~~~~----~~~~~---------~~~ae~~K~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~~~~~~~~~ 252 (344)
T 1jce_A 186 IVQYVRETY----RVAIG---------ERTAERVKIEIGNVFPSKENDELETTVSGIDLSTGLPRKLTLKGGEVREALRS 252 (344)
T ss_dssp HHHHHHHHH----CEECC---------HHHHHHHHHHHCBCSCCHHHHHCEEEEEEEETTTTEEEEEEEEHHHHHHHTHH
T ss_pred HHHHHHHHh----CcccC---------HHHHHHHHHHHhccCccccCCcceEEEeccccCCCCceeEEEeHHHHHHHHHH
Confidence 999998664 33332 3789999999986542 234443 44567778899999999999999
Q ss_pred hhHHHHHHHHHHHHHcCCC--CCCc-cEEEEecCCCChHHHHHHHHhHhCCCCCCCCCchhhHhchHHHHHHHhC
Q 005222 310 LTEKIAIPCRKALADAGLH--VDKI-HSVEIVGSGSRIPAITRLLTSLFGREPRRSLNASECVARGCALQCAMLS 381 (708)
Q Consensus 310 ~~~~i~~~i~~~l~~~~~~--~~~i-~~ViLvGG~srip~v~~~l~~~fg~~v~~~~n~~eava~GAa~~a~~~~ 381 (708)
+++++.+.|.++|+.++.. .+.+ +.|+|+||+|++|+|+++|++.|+.++....||++|||+||+++|+.++
T Consensus 253 ~~~~i~~~i~~~l~~~~~~~~~~~~~~~IvL~GG~s~~p~l~~~l~~~~~~~v~~~~~p~~ava~Gaa~~a~~~~ 327 (344)
T 1jce_A 253 VVVAIVESVRTTLEKTPPELVSDIIERGIFLTGGGSLLRGLDTLLQKETGISVIRSEEPLTAVAKGAGMVLDKVN 327 (344)
T ss_dssp HHHHHHHHHHHHHHTSCHHHHHHHHHHCEEEESGGGCSBTHHHHHHHHHSSCEEECSSTTTHHHHHHHHGGGCHH
T ss_pred HHHHHHHHHHHHHHhCCchhccchhhCcEEEECccccchHHHHHHHHHHCCCccccCChHHHHHHHHHHHHhChH
Confidence 9999999999999987532 2234 6899999999999999999999998888889999999999999998654
No 11
>4e81_A Chaperone protein DNAK; chaperone; 1.90A {Escherichia coli} PDB: 3dpp_A* 3dpq_A* 3qnj_A 3dpo_A 1dkz_A 1dky_A 1dkx_A 1bpr_A 2bpr_A 1dg4_A
Probab=100.00 E-value=1e-33 Score=277.50 Aligned_cols=212 Identities=14% Similarity=0.233 Sum_probs=188.3
Q ss_pred eEEeeccceeeEEEecCCCcccCCCcceEEecCCCCcCceEEEEeeeccc----eEEEEEEeCCCCCCCCCCccceeEEe
Q 005222 389 YEVQDCNPYSIGISSDEGPICIGSNTNGEVFPKGQPIPCVKVLTLQRSSL----FHLELFYTNPNELPPGISSKVSCFTI 464 (708)
Q Consensus 389 ~~~~d~~~~~i~i~~~~~~~~~~~~~~~~l~~~~~~~P~~k~~~~~~~~~----~~i~~~~~~~~~~~~~~~~~ig~~~i 464 (708)
+++.|++|++||+++.+ +.+.+|||||++||++++.+|++..| +.|.+++ |++..+.+|.+||+|.|
T Consensus 1 ~~l~DV~p~slGie~~g-------g~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~I~Vyq--Ge~~~~~dn~~Lg~f~l 71 (219)
T 4e81_A 1 VLLLDVTPLSLGIETMG-------GVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQ--GERKRAADNKSLGQFNL 71 (219)
T ss_dssp CCCCCBCSSCEEEEETT-------TEEEEEECTTCBSSEEEEEEEEESSTTCCEEEEEEEE--SSCSBGGGSEEEEEEEE
T ss_pred CeEEEecCcEEEEEEeC-------CEEEEEEeCcCcccEeEEEEEEeCCCCCceEEEEEEE--cCCcccccCCEEEEEEE
Confidence 35789999999999986 47999999999999999999998654 5666643 44444589999999999
Q ss_pred CCCCCCCCCcceeEEEEEEcCCeeEEEEEeeeeeccCCCCcccccccccccccccccccCCCCCccccccccccccccCC
Q 005222 465 GPFQGSNSENAKVKVTVKLNLHGIVSVESAWLIEGHGDDPVTKHNARSKMDKMESEGVSIDSSTTVEDVQDSASVQSKSS 544 (708)
Q Consensus 465 ~~i~~~~~~~~~i~v~~~ld~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 544 (708)
.|+||+|.|.+.|+|+|.+|.||+|+|++.+
T Consensus 72 ~gipp~p~G~~~IeVtf~iD~nGiL~V~a~d------------------------------------------------- 102 (219)
T 4e81_A 72 DGINPAPRGMPQIEVTFDIDADGILHVSAKD------------------------------------------------- 102 (219)
T ss_dssp ECCCCCSTTCSCEEEEEEECTTCCEEEEEEE-------------------------------------------------
T ss_pred eCCCCCCCCCceEEEEEEeCCCCCEeeeeec-------------------------------------------------
Confidence 9999999999999999999999999999973
Q ss_pred CCccccccccccceeeeEEEeeeccCCCCHHHHHHHHHHHHHHhhcchhHHHHHHHhhhHHHHHHHHHHHhhhhhccCCC
Q 005222 545 HSSAVSVVRDKAGRRLDISISETIYGGMTKPELALAQETENLLAQQDITMEQTKDKKNALESYVYEMRNKLFSTYRSFAS 624 (708)
Q Consensus 545 ~~~~~~~~~k~~~~~~~l~i~~~~~~~ls~~e~~~~~~~~~~~~~~D~~~~~~~~a~N~LEs~iy~~r~~l~~~~~~~~~ 624 (708)
+.+++...++|+.. .+||++|++++++++.+|..+|++.+++.++||.||+|+|.+|+.|++ +.++++
T Consensus 103 ---------~~tg~~~~i~I~~~--~~Ls~eeI~~m~~~a~~~~~eD~~~r~~~e~kn~le~~i~~~~~~l~~-~~~~l~ 170 (219)
T 4e81_A 103 ---------KNSGKEQKITIKAS--SGLNEDEIQKMVRDAEANAEADRKFEELVQTRNQGDHLLHSTRKQVEE-AGDKLP 170 (219)
T ss_dssp ---------TTTCCEEEEEECTT--CSCCHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HGGGSC
T ss_pred ---------cccCccceEeeecc--ccccHHHHHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHHHHHH-hhhhCC
Confidence 34456678888764 469999999999999999999999999999999999999999999986 888999
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCcCHHHHHHHHHHHHHhHHHHHHHHHh
Q 005222 625 DQEREGISRSLQETEEWLYDDGDDETANTYASKLEDLKKLVDPIENRYKD 674 (708)
Q Consensus 625 ~~e~~~l~~~l~e~~~WL~~~~~~a~~~~~~~kl~~L~~~~~pi~~R~~e 674 (708)
++++++|...+.++++||+++ ++++|++++++|++.+.||..|++.
T Consensus 171 ~~~k~~i~~~l~~~~~~L~~~----~~~~i~~~~~~L~~~~~~i~~~~~~ 216 (219)
T 4e81_A 171 ADDKTAIESALTALETALKGE----DKAAIEAKMQELAQVSQKLMEIAQQ 216 (219)
T ss_dssp HHHHHHHHHHHHHHHHHHHSS----CHHHHHHHHHHHHHHTHHHHHHC--
T ss_pred HHHHHHHHHHHHHHHHHHhcC----CHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999976 5899999999999999999999876
No 12
>1u00_A HSC66, chaperone protein HSCA; DNAK, HSP70; 1.95A {Escherichia coli} SCOP: a.8.4.1 b.130.1.1
Probab=100.00 E-value=7.6e-32 Score=267.15 Aligned_cols=211 Identities=17% Similarity=0.240 Sum_probs=184.3
Q ss_pred eeccceeeEEEecCCCcccCCCcceEEecCCCCcCceEEEEeeeccc----eEEEEEEeCCCCCCCCCCccceeEEeCCC
Q 005222 392 QDCNPYSIGISSDEGPICIGSNTNGEVFPKGQPIPCVKVLTLQRSSL----FHLELFYTNPNELPPGISSKVSCFTIGPF 467 (708)
Q Consensus 392 ~d~~~~~i~i~~~~~~~~~~~~~~~~l~~~~~~~P~~k~~~~~~~~~----~~i~~~~~~~~~~~~~~~~~ig~~~i~~i 467 (708)
.|++||+|||++.+ +.+.+|||||++||++++.+|++..| +.|.++++ ++..+.+|..||+|.|.|+
T Consensus 1 ~Dv~p~slGie~~~-------g~~~~li~rnt~iP~~k~~~f~t~~d~Q~~v~i~v~qG--e~~~~~~n~~Lg~f~l~gi 71 (227)
T 1u00_A 1 MDVIPLSLGLETMG-------GLVEKVIPRNTTIPVARAQDFTTFKDGQTAMSIHVMQG--ERELVQDCRSLARFALRGI 71 (227)
T ss_dssp CCBCSSCEEEEETT-------TEEEEEECTTCBSSEEEEEEEECSSTTCCCEEEEEEEC--SSSBGGGSEEEEEEEECCC
T ss_pred CCcccceEEEEEeC-------CEEEEEEeCcCccCceEEEEEEecCCCceEEEEEEEec--CCccCCCCCEEEEEEEeCC
Confidence 48999999999986 47899999999999999999998554 66777654 3333478999999999999
Q ss_pred CCCCCCcceeEEEEEEcCCeeEEEEEeeeeeccCCCCcccccccccccccccccccCCCCCccccccccccccccCCCCc
Q 005222 468 QGSNSENAKVKVTVKLNLHGIVSVESAWLIEGHGDDPVTKHNARSKMDKMESEGVSIDSSTTVEDVQDSASVQSKSSHSS 547 (708)
Q Consensus 468 ~~~~~~~~~i~v~~~ld~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 547 (708)
|+++.|.++|+|+|.+|.||+|+|++.+
T Consensus 72 ~~~p~G~~~I~Vtf~iD~nGiL~V~a~d---------------------------------------------------- 99 (227)
T 1u00_A 72 PALPAGGAHIRVTFQVDADGLLSVTAME---------------------------------------------------- 99 (227)
T ss_dssp CCCSTTCSCEEEEEEECTTCCEEEEEEE----------------------------------------------------
T ss_pred CCCCCCceEEEEEEEECCCCcEEEEeec----------------------------------------------------
Confidence 9999999999999999999999999873
Q ss_pred cccccccccceeeeEEEeeeccCCCCHHHHHHHHHHHHHHhhcchhHHHHHHHhhhHHHHHHHHHHHhhhhhccCCCHHH
Q 005222 548 AVSVVRDKAGRRLDISISETIYGGMTKPELALAQETENLLAQQDITMEQTKDKKNALESYVYEMRNKLFSTYRSFASDQE 627 (708)
Q Consensus 548 ~~~~~~k~~~~~~~l~i~~~~~~~ls~~e~~~~~~~~~~~~~~D~~~~~~~~a~N~LEs~iy~~r~~l~~~~~~~~~~~e 627 (708)
+.+++...++|+.. .+||+++++++.+++.+|..+|+.++++.++||+||+|+|.+|+.|.+ +.+++++++
T Consensus 100 ------~~tg~~~~i~i~~~--~~Ls~eei~~~~~~~~~~~~~D~~~~e~~e~kn~le~~i~~~~~~l~~-~~~~~~~~~ 170 (227)
T 1u00_A 100 ------KSTGVEASIQVKPS--YGLTDSEIASMIKDSMSYAEQDVKARMLAEQKVEAARVLESLHGALAA-DAALLSAAE 170 (227)
T ss_dssp ------TTTCCEEEEEECCC--SCCCHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HGGGSCHHH
T ss_pred ------ccccccceEEEEec--cCCCHHHHHHHHHHHHhhhcccHHHHHHHHHHHHHHHHHHHHHHHHHh-hhccCCHHH
Confidence 12233456777655 459999999999999999999999999999999999999999999976 788999999
Q ss_pred HHHHHHHHHHHHHHhhcCCCCcCHHHHHHHHHHHHHhHHHHHHHHHhhh
Q 005222 628 REGISRSLQETEEWLYDDGDDETANTYASKLEDLKKLVDPIENRYKDGE 676 (708)
Q Consensus 628 ~~~l~~~l~e~~~WL~~~~~~a~~~~~~~kl~~L~~~~~pi~~R~~e~~ 676 (708)
++++...++++++||+.+ ++++|++++++|++++.||..|++...
T Consensus 171 k~~i~~~l~~~~~wl~~~----d~~~~~~~~~~L~~~~~~i~~r~~~~~ 215 (227)
T 1u00_A 171 RQVIDDAAAHLSEVAQGD----DVDAIEQAIKNVDKQTQDFAARRMDQS 215 (227)
T ss_dssp HHHHHHHHHHHHHHTTSS----CHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcC----CHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999954 489999999999999999999876433
No 13
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=99.95 E-value=8e-29 Score=263.24 Aligned_cols=227 Identities=19% Similarity=0.182 Sum_probs=169.2
Q ss_pred ecHHHHHHHHHHHHHHHHHhhcCCCcceEE--EEecCCCCHHHHHHHHHHHHHc--------C------CcceeeecchH
Q 005222 112 FCPVQVMGMLFSHLKDVAEKNLEMPVVDCV--IGVPSYFTDLQRREYLNAASIA--------G------LRPLRLIHDCT 175 (708)
Q Consensus 112 ~~~~el~a~~L~~l~~~a~~~~~~~~~~~V--itVPa~~~~~qr~~l~~Aa~~A--------G------l~~~~li~Ep~ 175 (708)
+..+...++++..|+..++...+.+ .++| |+||++|+..||+++++++..+ | +..+.+++||+
T Consensus 95 ~~~~~~~~ll~~~l~~~~~~~~~~~-~~vvL~i~vP~~~~~~er~a~~~~~~~~~~~v~~~~G~~~~i~v~~v~li~Ep~ 173 (346)
T 2fsj_A 95 LASKEAFPLIAAALWESGIHNDGSP-VDLVIGSGTPLGTFDLEVKAAKEALENKVLTVTGPEGEVRQFNITRLIMRPQGV 173 (346)
T ss_dssp TTSTTTHHHHHHHHHHHCCCC---C-EEEEEEEEECGGGHHHHHHHHHHHHTTEEEEEECGGGCEEEEEEEEEEEEETTH
T ss_pred ccChhHHHHHHHHHHHhhhccCCCc-eEEEEcccCCHHHHHHHHHHHHHHHcCCCcEEEeCCCceEEEEEEEEEEEccHH
Confidence 3446677778877777653333333 5699 9999999999999999997765 4 35688999999
Q ss_pred HHHHhccccccCCCCCCceEEEEEEeCCcceEEEEEEEeCCeEEEEEEeCCCCcchHHHHHHHHHHHHHHHHHhhcc--c
Q 005222 176 ATALGYGIYKTDFANGGKSYIAFVDIGHSDTQVSIVSFEAGHMKVLSHAFDSSLGGRDFDDVLFGYFAAKFKEQYKI--N 253 (708)
Q Consensus 176 Aaal~y~~~~~~~~~~~~~~vlv~D~Gggt~dvsv~~~~~~~~~v~~~~~~~~lGG~~id~~l~~~l~~~~~~~~~~--~ 253 (708)
|||++| +.... .......++|||+||||||++++++.++. .+.++.++.++||.+|++.|.+++.++ |+. +
T Consensus 174 AAa~~~-l~~~~-~~~~~~~vlVvDIGgGTtDv~vi~~~~g~-~v~~~s~~~~lGg~~i~~~I~~~i~~~----~g~~~~ 246 (346)
T 2fsj_A 174 GAALYL-LNQGI-IEQQPGYGVVIDVGSRTTDVLTINLMDME-PVVELSFSLQIGVGDAISALSRKIAKE----TGFVVP 246 (346)
T ss_dssp HHHHHH-HHHTS-SCCCSSEEEEEEECSSCEEEEEEETTTTE-ECGGGCEEESCCHHHHHHHHHHHHHHH----HCCCCC
T ss_pred HHHHHh-hcccc-ccccCCcEEEEECCCCcEEEEEEEecCCE-EEeecCCCcchhHHHHHHHHHHHHHHH----hCCCcC
Confidence 999988 22211 11234789999999999999999887766 455545678999999999999877655 444 2
Q ss_pred ccCCHHHHHHHHHHHHHhhhhcCCCCeeeEEeccccCCcceEEEeCHHHH-HHHhhhhhHHHHHHHHHHHHHcCCCCCCc
Q 005222 254 VYSNVRACIRLRAACEKLKKVLSANAEAPLNIECLMDEKDVRGFIKREEF-EELASGLTEKIAIPCRKALADAGLHVDKI 332 (708)
Q Consensus 254 ~~~~~~~~~rL~~~~e~~K~~Ls~~~~~~i~i~~l~~~~d~~~~itr~~f-e~~~~~~~~~i~~~i~~~l~~~~~~~~~i 332 (708)
+.. ..++ . ...+.+ .+. .++++++ +++++++++++.+.++++|+++ .+++
T Consensus 247 i~~---------~~~e-------~--~~~~~~----~g~----~~~~~~i~~~~i~~~~~~i~~~i~~~l~~~---~~~i 297 (346)
T 2fsj_A 247 FDL---------AQEA-------L--SHPVMF----RQK----QVGGPEVSGPILEDLANRIIENIRLNLRGE---VDRV 297 (346)
T ss_dssp HHH---------HHHH-------T--TSCEEE----TTE----EECSHHHHHHHHHHHHHHHHHHHHHHHGGG---GGGE
T ss_pred CCH---------HHHh-------c--CCeEeE----CCc----cCCHHHHHHHHHHHHHHHHHHHHHHHHHhh---hhcc
Confidence 221 1222 0 112333 232 3568999 9999999999999999999876 4578
Q ss_pred cEEEEecCCCChHHHHHHHHhHhCCCCCC---CCCchhhHhchHHHHHH
Q 005222 333 HSVEIVGSGSRIPAITRLLTSLFGREPRR---SLNASECVARGCALQCA 378 (708)
Q Consensus 333 ~~ViLvGG~srip~v~~~l~~~fg~~v~~---~~n~~eava~GAa~~a~ 378 (708)
+.|+|+||++++ +++.|++.|+. +.. ..||++|+|+|+..++.
T Consensus 298 ~~IvL~GGga~l--l~~~l~~~~~~-~~i~~~~~~P~~ava~G~~~~~~ 343 (346)
T 2fsj_A 298 TSLIPVGGGSNL--IGDRFEEIAPG-TLVKIKPEDLQFANALGYRDAAE 343 (346)
T ss_dssp EEEEEESTTHHH--HGGGGGGGSTT-CBCCCCTTTTTTHHHHHHHHHHH
T ss_pred cEEEEECCcHHH--HHHHHHHHCcC-cEEeccCCCcHHHHHHHHHHHHh
Confidence 999999999999 99999999973 334 67999999999998764
No 14
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=99.94 E-value=1.9e-27 Score=256.96 Aligned_cols=306 Identities=16% Similarity=0.189 Sum_probs=198.1
Q ss_pred EEEEEccccceEEEEEeCCceEEEeCCCCCccceEEEEEcCCcEEEcHHHHHhHhcCCcchHHHHHHhhCCCCCChHHHh
Q 005222 3 VVGFDIGNENCVIATVKHRGVDVLLNEESNRETPSIVCFGEKQRFIGAAGYASAMMHPKSTVSQVKRLIGRRYGDPVVQK 82 (708)
Q Consensus 3 vvGID~GTt~s~va~~~~~~~~ii~~~~g~r~~Ps~v~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~llg~~~~~~~v~~ 82 (708)
++|||+||++++++++.++++.+ +..|...+|+.+. . .....++..+...+|+++++.- .
T Consensus 15 ~vgiDiGt~~i~~~~~~~~~~~i--~~~g~~~~ps~~~-~-----------~g~i~d~~~~~~~ik~~~~~~~------~ 74 (377)
T 2ych_A 15 ALGLEIGASALKLVEVSGNPPAL--KALASRPTPPGLL-M-----------EGMVAEPAALAQEIKELLLEAR------T 74 (377)
T ss_dssp CEEEEECSSEEEEEEEETTTTEE--EEEEEEECCTTSE-E-----------TTEESCHHHHHHHHHHHHHHHT------C
T ss_pred eEEEEeCCCeEEEEEEeCCceEE--EEEEeEECCCCcc-c-----------CCCcCCHHHHHHHHHHHHHHcC------C
Confidence 68999999999999887665444 3334455555432 1 1123566778888898887510 0
Q ss_pred hhccCCceeeecCCCCeEE-EEEecCceeeecHHHHHHHHHHHHHHHHHhhcCCCcceEEEEecCCCCH-----------
Q 005222 83 DLMVLPFESCESPDGGISI-KLKYLGETHTFCPVQVMGMLFSHLKDVAEKNLEMPVVDCVIGVPSYFTD----------- 150 (708)
Q Consensus 83 ~~~~~~~~~~~~~~g~~~~-~v~~~~~~~~~~~~el~a~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~----------- 150 (708)
..+.+ .+..+...+.. .+. ...++++++-.. ++..++.+++.++.+++|.+|..=..
T Consensus 75 ~~~~v---~~~i~~~~~~~~~~~----~~~v~~~el~~~----i~~ea~~~~~~~~~~~vid~~~~~~~~~~~~~~~~~v 143 (377)
T 2ych_A 75 RKRYV---VTALSNLAVILRPIQ----VPKMPLKEMEEA----VRWEAERYIPFPIDEVVLDFAPLTPLSEVQEGEQVQV 143 (377)
T ss_dssp CCCEE---EEEECGGGCEEEEEE----EECCCHHHHHHH----HHHHHGGGCSSCC-CEEEEEEESSCGGGSCTTSEEEE
T ss_pred CcceE---EEEecCCcEEEEEEE----CCCCCHHHHHHH----HHHHHhhcCCCChhHceEEEEEeCCCCCCCCcceeEE
Confidence 00111 11122222211 111 135777777653 34467788899999999999832111
Q ss_pred -------HHHHHHHHHHHHcCCcceeeecchHHHHHhccccccCCCCCCceEEEEEEeCCcceEEEEEEEeCCeEEEEEE
Q 005222 151 -------LQRREYLNAASIAGLRPLRLIHDCTATALGYGIYKTDFANGGKSYIAFVDIGHSDTQVSIVSFEAGHMKVLSH 223 (708)
Q Consensus 151 -------~qr~~l~~Aa~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~Gggt~dvsv~~~~~~~~~v~~~ 223 (708)
...+++++|++.|||++..++.||+|||++|+....+ ..+..++|||+||||||+++++ .|.+ ..
T Consensus 144 ~~va~~~~~v~~~~~~~~~aGl~~~~i~~ep~Aaa~~~~~~~~~---~~~~~~~vvDiGggttdi~i~~--~g~~--~~- 215 (377)
T 2ych_A 144 MVAAARQEAVAGVLEALRGAGLVPVVLDVKPFAGLYPLEARLAE---EPDRVFLVLDIGAESTSLVLLR--GDKP--LA- 215 (377)
T ss_dssp EEEEEEHHHHHHHHHHHHHTTCEEEEEEEHHHHTTGGGHHHHHT---STTCEEEEEEECSSCEEEEEEE--TTEE--EE-
T ss_pred EEEEecHHHHHHHHHHHHHCCCceEEEecchHHHHHHHHhhccc---ccCCeEEEEEECCCcEEEEEEE--CCEE--EE-
Confidence 1238899999999999999999999999998754321 3457899999999999999986 4443 22
Q ss_pred eCCCCcchHHHHHHHHHHHHHHHHHhhcccccCCHHHHHHHHHHHHHhhhhcCCCCeeeEEeccccCCcceEEEeCHHHH
Q 005222 224 AFDSSLGGRDFDDVLFGYFAAKFKEQYKINVYSNVRACIRLRAACEKLKKVLSANAEAPLNIECLMDEKDVRGFIKREEF 303 (708)
Q Consensus 224 ~~~~~lGG~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~~e~~K~~Ls~~~~~~i~i~~l~~~~d~~~~itr~~f 303 (708)
.++.++||.+||+.|++. ++.+ +..||++|+.++............++-.+....++|++|
T Consensus 216 ~~~~~~GG~~i~~~i~~~--------~~~~-----------~~~aE~~K~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~ 276 (377)
T 2ych_A 216 VRVLTLSGKDFTEAIARS--------FNLD-----------LLAAEEVKRTYGMATLPTEDEELLLDFDAERERYSPGRI 276 (377)
T ss_dssp EEEESCSHHHHHHHHHHH--------TTCC-----------HHHHHHHHHHTC-------------------------CH
T ss_pred EEeeechHHHHHHHHHHH--------hCCC-----------HHHHHHHHhhcccccccccccccccccccccccCCHHHH
Confidence 346799999999999863 2332 368999999987543211110000111123457899999
Q ss_pred HHHhhhhhHHHHHHHHHHHHHc--CCCCCCccEEEEecCCCChHHHHHHHHhHhCCCCCCCCCchh
Q 005222 304 EELASGLTEKIAIPCRKALADA--GLHVDKIHSVEIVGSGSRIPAITRLLTSLFGREPRRSLNASE 367 (708)
Q Consensus 304 e~~~~~~~~~i~~~i~~~l~~~--~~~~~~i~~ViLvGG~srip~v~~~l~~~fg~~v~~~~n~~e 367 (708)
++++++.++++...|++.|+.. +.....++.|+|+||++++|.+++.+++.||.++... ||++
T Consensus 277 ~~~i~~~~~~i~~~i~~~l~~~~~~~~~~~~~~IvL~GG~s~~p~l~~~l~~~l~~~v~~~-~P~~ 341 (377)
T 2ych_A 277 YDAIRPVLVELTQELRRSLEFFRIQLEEASPEVGYLLGGGSKLRGLASLLTDTLGVNLEPV-NPWE 341 (377)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHC---CCSEEEEESGGGGSTTHHHHHHHHHTSEEEEC-CGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCCCcCEEEEECccccchhHHHHHHHHhCCCeEec-Cchh
Confidence 9999999999999999999863 5666689999999999999999999999998665433 4433
No 15
>3n8e_A Stress-70 protein, mitochondrial; beta-sandwich, helix, substrate binding domain, structural G consortium, SGC, chaperone; 2.80A {Homo sapiens}
Probab=99.94 E-value=9.8e-27 Score=220.10 Aligned_cols=160 Identities=18% Similarity=0.282 Sum_probs=135.7
Q ss_pred cceEEeeccceeeEEEecCCCcccCCCcceEEecCCCCcCceEEEEeeeccc----eEEEEEEeCCCCCCCCCCccceeE
Q 005222 387 REYEVQDCNPYSIGISSDEGPICIGSNTNGEVFPKGQPIPCVKVLTLQRSSL----FHLELFYTNPNELPPGISSKVSCF 462 (708)
Q Consensus 387 ~~~~~~d~~~~~i~i~~~~~~~~~~~~~~~~l~~~~~~~P~~k~~~~~~~~~----~~i~~~~~~~~~~~~~~~~~ig~~ 462 (708)
..+.+.|++|++||+++.+ +.+.+|||||++||++++.+|++..| +.|.+++ |++..+.+|.+||+|
T Consensus 18 ~~f~l~DV~P~slGie~~g-------g~~~~lI~rnt~iP~~k~~~f~T~~DnQ~~v~I~Vyq--GE~~~~~dn~~LG~f 88 (182)
T 3n8e_A 18 LYFQSMDVTPLSLGIETLG-------GVFTKLINRNTTIPTKKSQVFSTAADGQTQVEIKVCQ--GEREMAGDNKLLGQF 88 (182)
T ss_dssp ------CBCSSCEEEECTT-------SBEEEEECTTCBSSEEEEEEECCSSTTCCCEEEEEEE--SSCSBGGGSEEEEEE
T ss_pred CCEEEEEecCCEEEEEEeC-------CEEEEEEeCCCccCEEEEEEEEECCCCccEEEEEEEE--cCccccccCceEEEE
Confidence 3578999999999999986 47899999999999999999998665 6677743 333335899999999
Q ss_pred EeCCCCCCCCCcceeEEEEEEcCCeeEEEEEeeeeeccCCCCcccccccccccccccccccCCCCCcccccccccccccc
Q 005222 463 TIGPFQGSNSENAKVKVTVKLNLHGIVSVESAWLIEGHGDDPVTKHNARSKMDKMESEGVSIDSSTTVEDVQDSASVQSK 542 (708)
Q Consensus 463 ~i~~i~~~~~~~~~i~v~~~ld~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 542 (708)
.|.|+||++.|.++|+|+|.+|.||+|+|++.+
T Consensus 89 ~l~gipp~p~G~~~IeVtf~iD~nGiL~VsA~d----------------------------------------------- 121 (182)
T 3n8e_A 89 TLIGIPPAPRGVPQIEVTFDIDANGIVHVSAKD----------------------------------------------- 121 (182)
T ss_dssp EECCCCCCCTTCSCEEEEEEECTTCCEEEEEEE-----------------------------------------------
T ss_pred EEcCCCCCCCCCeeEEEEEEEecCCEEEEEEEE-----------------------------------------------
Confidence 999999999999999999999999999999973
Q ss_pred CCCCccccccccccceeeeEEEeeeccCCCCHHHHHHHHHHHHHHhhcchhHHHHHHHhhhHHHHHHHHHHHh
Q 005222 543 SSHSSAVSVVRDKAGRRLDISISETIYGGMTKPELALAQETENLLAQQDITMEQTKDKKNALESYVYEMRNKL 615 (708)
Q Consensus 543 ~~~~~~~~~~~k~~~~~~~l~i~~~~~~~ls~~e~~~~~~~~~~~~~~D~~~~~~~~a~N~LEs~iy~~r~~l 615 (708)
+.+++...++|+.. ++||++|++++++++.+|..+|++.+++.++||.||+|+|.+|+.|
T Consensus 122 -----------~~tg~~~~i~I~~~--~~Ls~eei~~mi~~a~~~~~eD~~~~~~~e~kn~le~~iy~~~~~l 181 (182)
T 3n8e_A 122 -----------KGTGREQQIVIQSS--GGLSKDDIENMVKNAEKYAEEDRRKKERVEAVNMAEGIIHDTETKM 181 (182)
T ss_dssp -----------TTTCCEEEEEESCC--CCCCHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHCCSCCC
T ss_pred -----------cCCCCEeeEEEecC--ccCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 34456677888765 5799999999999999999999999999999999999999998765
No 16
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=99.94 E-value=9e-26 Score=232.46 Aligned_cols=202 Identities=21% Similarity=0.299 Sum_probs=172.7
Q ss_pred HHHHHHHHHHHHHHHhhcCCCcceEEEEecCCCCHHHHHHHHHHHHHcCCcceeeecchHHHHHhccccccCCCCCCceE
Q 005222 116 QVMGMLFSHLKDVAEKNLEMPVVDCVIGVPSYFTDLQRREYLNAASIAGLRPLRLIHDCTATALGYGIYKTDFANGGKSY 195 (708)
Q Consensus 116 el~a~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~l~~Aa~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~ 195 (708)
+....+|+++++.++...+.....+++++|++|...+|++++.+++.+|+++..++.||+|++++|+.. .
T Consensus 71 ~~~~~~l~~~~~~~~~~~~~~~~~~v~tvp~~~~~~~~~~~~~~~~~~g~~~~~i~~e~~A~a~~~~~~----------~ 140 (272)
T 3h1q_A 71 IGAIQIVRELKAKVERLLGSELFQAATAIPPGTVGRNAEACGHVVAGAGLELVTLVDEPVAAARALGIN----------D 140 (272)
T ss_dssp HHHHHHHHHHHHHHHHHSSSCCCEEEEECCSCC---CTTHHHHHHHHTTCEEEEEECHHHHHHHHHTCS----------S
T ss_pred HHHHHHHHHHHHHHHHhcCCccCeEEEEcCCCCCHHHHHHHHHHHHHcCCeeeecccHHHHHHHHHcCC----------C
Confidence 456788888888888887888889999999999999999999999999999999999999999988642 2
Q ss_pred EEEEEeCCcceEEEEEEEeCCeEEEEEEeCCCCcchHHHHHHHHHHHHHHHHHhhcccccCCHHHHHHHHHHHHHhhhhc
Q 005222 196 IAFVDIGHSDTQVSIVSFEAGHMKVLSHAFDSSLGGRDFDDVLFGYFAAKFKEQYKINVYSNVRACIRLRAACEKLKKVL 275 (708)
Q Consensus 196 vlv~D~Gggt~dvsv~~~~~~~~~v~~~~~~~~lGG~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~~e~~K~~L 275 (708)
.+|+|+|||||+++++. .+.+ + .....++||.+||+.|.+++. .+ ...|+++|+.+
T Consensus 141 ~~viDiGggst~~~~~~--~g~~--~-~~~~~~~Gg~~~~~~l~~~l~--------~~-----------~~~ae~~k~~~ 196 (272)
T 3h1q_A 141 GIVVDIGGGTTGIAVIE--KGKI--T-ATFDEPTGGTHLSLVLAGSYK--------IP-----------FEEAETIKKDF 196 (272)
T ss_dssp EEEEEECSSCEEEEEEE--TTEE--E-EECCBSCCHHHHHHHHHHHHT--------CC-----------HHHHHHHHHSS
T ss_pred EEEEEECCCcEEEEEEE--CCEE--E-EEecCCCcHHHHHHHHHHHhC--------CC-----------HHHHHHHHHhc
Confidence 59999999999999986 4443 2 335789999999999988763 11 26788999887
Q ss_pred CCCCeeeEEeccccCCcceEEEeCHHHHHHHhhhhhHHHHHHHHHHHHHcCCCCCCccEEEEecCCCChHHHHHHHHhHh
Q 005222 276 SANAEAPLNIECLMDEKDVRGFIKREEFEELASGLTEKIAIPCRKALADAGLHVDKIHSVEIVGSGSRIPAITRLLTSLF 355 (708)
Q Consensus 276 s~~~~~~i~i~~l~~~~d~~~~itr~~fe~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~srip~v~~~l~~~f 355 (708)
+ ++++|++++.++++++...+.+.++..+ +++.|+|+||++++|.+++++++.|
T Consensus 197 ~----------------------~~~~~~~~~~~~~~~i~~~i~~~l~~~~----~~~~ivL~GG~a~~~~l~~~l~~~l 250 (272)
T 3h1q_A 197 S----------------------RHREIMRVVRPVIEKMALIVKEVIKNYD----QTLPVYVVGGTAYLTGFSEEFSRFL 250 (272)
T ss_dssp T----------------------THHHHHHHHHHHHHHHHHHHHHHTTTSC----SSCCEEEESGGGGSTTHHHHHHHHH
T ss_pred C----------------------CHHHHHHHHHHHHHHHHHHHHHHHHhcC----CCCEEEEECCccchhhHHHHHHHHh
Confidence 5 5899999999999999999999998754 4789999999999999999999999
Q ss_pred CCCCCCCCCchhhHhchHHHHH
Q 005222 356 GREPRRSLNASECVARGCALQC 377 (708)
Q Consensus 356 g~~v~~~~n~~eava~GAa~~a 377 (708)
+.++..+.+|++++|+|||++|
T Consensus 251 ~~~v~~~~~p~~a~a~Gaal~a 272 (272)
T 3h1q_A 251 GKEVQVPIHPLLVTPLGIALFG 272 (272)
T ss_dssp SSCCBCCSSGGGHHHHHHHTTC
T ss_pred CCCccccCChHHHHHHHHHhcC
Confidence 9999999999999999999864
No 17
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A
Probab=99.93 E-value=2.6e-25 Score=243.36 Aligned_cols=227 Identities=12% Similarity=0.042 Sum_probs=166.5
Q ss_pred cceEEEEecCCCCHHHHHHHHHHH-HHcCCcceeeecchHHHHHh-ccccccCCCCCCceEEEEEEeCCcceEEEEEEEe
Q 005222 137 VVDCVIGVPSYFTDLQRREYLNAA-SIAGLRPLRLIHDCTATALG-YGIYKTDFANGGKSYIAFVDIGHSDTQVSIVSFE 214 (708)
Q Consensus 137 ~~~~VitVPa~~~~~qr~~l~~Aa-~~AGl~~~~li~Ep~Aaal~-y~~~~~~~~~~~~~~vlv~D~Gggt~dvsv~~~~ 214 (708)
...+|||+|++|+..+|+++.+++ +.+|++.+.+++||+||+++ |... .++.... +.||||+|+||||++++.
T Consensus 107 ~~~vvit~p~~~~~~~r~~~~e~~fe~~g~~~~~l~~ep~aa~~a~~~~~--~~~~~~~-~glVvDiG~gtt~v~~v~-- 181 (418)
T 1k8k_A 107 DHYFLLTEPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALAASWTSR--QVGERTL-TGTVIDSGDGVTHVIPVA-- 181 (418)
T ss_dssp GCCEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHGGGST--TCCSCCC-CEEEEEESSSCEEEEEEE--
T ss_pred CCcEEEEeCCCCCHHHHHHHHHHHHHhcCCCEEEEechHHHHhhhhhccc--ccCCCCC-eEEEEEcCCCceEEEEeE--
Confidence 457999999999999999999999 88999999999999999987 4211 1111223 679999999999999985
Q ss_pred CCeEEEEEEeCCCCcchHHHHHHHHHHHHHHHHHhhcccccCCHHHHHHHHHHHHHhhhhcCCCC---------------
Q 005222 215 AGHMKVLSHAFDSSLGGRDFDDVLFGYFAAKFKEQYKINVYSNVRACIRLRAACEKLKKVLSANA--------------- 279 (708)
Q Consensus 215 ~~~~~v~~~~~~~~lGG~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~~e~~K~~Ls~~~--------------- 279 (708)
.|.. +.......++||++||+.|.+++..++ +...... -...++++|+.++...
T Consensus 182 ~G~~-~~~~~~~~~lGG~~lt~~l~~~l~~~~---~~~~~~~-------~~~~~e~iK~~~~~v~~~~~~e~~~~~~~~~ 250 (418)
T 1k8k_A 182 EGYV-IGSCIKHIPIAGRDITYFIQQLLRDRE---VGIPPEQ-------SLETAKAVKERYSYVCPDLVKEFNKYDTDGS 250 (418)
T ss_dssp TTEE-CGGGCEEESCSHHHHHHHHHHHHHTTC---CCCCGGG-------HHHHHHHHHHHHCCCCSCHHHHHHHHHHSGG
T ss_pred CCEE-cccceEEEeCcHHHHHHHHHHHHHhcC---CCCCCHH-------HHHHHHHHHHhhchhcccHHHHHHhhccccc
Confidence 4432 332224678999999999999987542 1111111 1256778888775421
Q ss_pred --eeeEEeccccCCcceEEEeCHHHH---HHHhhhhh------HHHHHHHHHHHHHcC--CCCCCccEEEEecCCCChHH
Q 005222 280 --EAPLNIECLMDEKDVRGFIKREEF---EELASGLT------EKIAIPCRKALADAG--LHVDKIHSVEIVGSGSRIPA 346 (708)
Q Consensus 280 --~~~i~i~~l~~~~d~~~~itr~~f---e~~~~~~~------~~i~~~i~~~l~~~~--~~~~~i~~ViLvGG~srip~ 346 (708)
...+.+++...+....+.+++++| |.++.|.+ ..+.+.|.++|..+. +....++.|+|+||+|++|.
T Consensus 251 ~~~~~~~lpd~~~~~~~~i~l~~erf~~~E~lF~P~~~~~~~~~~i~~~i~~si~~~~~~~~~~l~~~IvL~GG~s~~pg 330 (418)
T 1k8k_A 251 KWIKQYTGINAISKKEFSIDVGYERFLGPEIFFHPEFANPDFTQPISEVVDEVIQNCPIDVRRPLYKNIVLSGGSTMFRD 330 (418)
T ss_dssp GTCEEEEEECTTTCCEEEEEECTHHHHHHHTTTCGGGTCTTCCCCHHHHHHHHHHHSCGGGTTHHHHCEEEESGGGCSTT
T ss_pred ccceeEECCCCCCCcccEEEeChHHhhCcHhhCCCccCCCCCCCCHHHHHHHHHHcCCHHHHHHHHhceEEeCCcccccc
Confidence 124566655555667889999999 66666543 578899999999864 44556789999999999999
Q ss_pred HHHHHHhHhCC------------------------CCCCCCCchhhHhchHHHHHHH
Q 005222 347 ITRLLTSLFGR------------------------EPRRSLNASECVARGCALQCAM 379 (708)
Q Consensus 347 v~~~l~~~fg~------------------------~v~~~~n~~eava~GAa~~a~~ 379 (708)
++++|++.++. .+..+.+|..++.+||+++|..
T Consensus 331 ~~~rl~~el~~~~~~~~~~~~~~~~~~~~p~~~~v~v~~~~~~~~~~w~Ggsilasl 387 (418)
T 1k8k_A 331 FGRRLQRDLKRTVDARLKLSEELSGGRLKPKPIDVQVITHHMQRYAVWFGGSMLAST 387 (418)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHC----CCCCCCCCEECCTTCTTHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHhhccccccccccccccCCCCceeEEEeCCCccccceeHhHHHHHcC
Confidence 99999876631 1223457789999999999863
No 18
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ...
Probab=99.92 E-value=9.5e-25 Score=235.11 Aligned_cols=213 Identities=15% Similarity=0.150 Sum_probs=154.5
Q ss_pred ceEEEEecCCCCHHHHHHHHHHH-HHcCCcceeeecchHHHHHhccccccCCCCCCceEEEEEEeCCcceEEEEEEEeCC
Q 005222 138 VDCVIGVPSYFTDLQRREYLNAA-SIAGLRPLRLIHDCTATALGYGIYKTDFANGGKSYIAFVDIGHSDTQVSIVSFEAG 216 (708)
Q Consensus 138 ~~~VitVPa~~~~~qr~~l~~Aa-~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~Gggt~dvsv~~~~~~ 216 (708)
..++||+|++++..+|+++.+++ +.+|++.+.+++||+|||++|+. ...||||+|+|||+++.+. +|
T Consensus 101 ~~vvit~p~~~~~~~r~~~~e~~fe~~g~~~~~~~~e~~aaa~a~g~----------~~~lVvDiG~gtt~v~~v~--~G 168 (375)
T 2fxu_A 101 HPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGR----------TTGIVLDSGDGVTHNVPIY--EG 168 (375)
T ss_dssp SCEEEEECTTCCHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHTTC----------SSEEEEEECSSCEEEEEEE--TT
T ss_pred CcEEEEeCCCCcHHHHHHHHHHHHHhcCcceEEEccchheeeeecCC----------CeEEEEEcCCCceEEeEeE--CC
Confidence 45999999999999999888765 88899999999999999999874 3589999999999987763 55
Q ss_pred eEEEEEEeCCCCcchHHHHHHHHHHHHHHHHHhhcccccCCHHHHHHHHHHHHHhhhhcC----------------CCCe
Q 005222 217 HMKVLSHAFDSSLGGRDFDDVLFGYFAAKFKEQYKINVYSNVRACIRLRAACEKLKKVLS----------------ANAE 280 (708)
Q Consensus 217 ~~~v~~~~~~~~lGG~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~~e~~K~~Ls----------------~~~~ 280 (708)
.. +.......++||+++|+.|.+++..+ .+. +.. .. -...++++|+.+. ....
T Consensus 169 ~~-~~~~~~~~~~GG~~lt~~l~~~l~~~---~~~--~~~--~~---~~~~~e~iK~~~~~v~~~~~~e~~~~~~~~~~~ 237 (375)
T 2fxu_A 169 YA-LPHAIMRLDLAGRDLTDYLMKILTER---GYS--FVT--TA---EREIVRDIKEKLCYVALDFENEMATAASSSSLE 237 (375)
T ss_dssp EE-CGGGCEEESCCHHHHHHHHHHHHHHH---TCC--CCS--HH---HHHHHHHHHHHHCCCCSSHHHHHHHHHHCSTTC
T ss_pred EE-eccceEEeccCHHHHHHHHHHHHHhc---CCC--CCc--HH---HHHHHHHHHHHHHhhcccHHHHHHhhcccCccC
Confidence 32 33223357899999999999998764 121 111 00 1134455555543 2222
Q ss_pred eeEEeccccCCcceEEEeCHHHH---HHHhhhh-----hHHHHHHHHHHHHHcC--CCCCCccEEEEecCCCChHHHHHH
Q 005222 281 APLNIECLMDEKDVRGFIKREEF---EELASGL-----TEKIAIPCRKALADAG--LHVDKIHSVEIVGSGSRIPAITRL 350 (708)
Q Consensus 281 ~~i~i~~l~~~~d~~~~itr~~f---e~~~~~~-----~~~i~~~i~~~l~~~~--~~~~~i~~ViLvGG~srip~v~~~ 350 (708)
..+.++ ++ ..+.|+++.| |.+++|. ...+.+.|.++|..+. +....++.|+|+||+|++|.++++
T Consensus 238 ~~~~lp---dg--~~i~i~~erf~~~E~lf~p~~~~~~~~~i~~~i~~~i~~~~~~~~~~l~~~IvLtGG~s~~pG~~~r 312 (375)
T 2fxu_A 238 KSYELP---DG--QVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIADR 312 (375)
T ss_dssp EEEECT---TS--CEEEESTHHHHHHHTTTCGGGGTCCSCCHHHHHHHHHHTSCHHHHHHHHTCEEEESGGGCSTTHHHH
T ss_pred eEEECC---CC--CEEEEChhheechHhhCCCccCCCCCCCHHHHHHHHHHhCCHHHHHHHHhCcEeeCCCCCCccHHHH
Confidence 334443 22 3567888888 4455553 3568888888888652 223345789999999999999999
Q ss_pred HHhHhC--------CCCCCCCCchhhHhchHHHHHH
Q 005222 351 LTSLFG--------REPRRSLNASECVARGCALQCA 378 (708)
Q Consensus 351 l~~~fg--------~~v~~~~n~~eava~GAa~~a~ 378 (708)
|.+.++ .++..+.+|..++++||+++|.
T Consensus 313 l~~el~~~~p~~~~v~v~~~~~p~~~~w~G~si~a~ 348 (375)
T 2fxu_A 313 MQKEITALAPSTMKIKIIAPPERKYSVWIGGSILAS 348 (375)
T ss_dssp HHHHHHHHSCTTCCCCEECCTTTTSHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCeeEEEEcCCCCCccEEcchHHhhC
Confidence 998875 2334567999999999999997
No 19
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=99.91 E-value=2e-24 Score=234.21 Aligned_cols=199 Identities=15% Similarity=0.108 Sum_probs=157.4
Q ss_pred HHHHHHHHHHHHcCCcceeeecchHHHHHhccccccCCCCCCceEEEEEEeCCcceEEEEEEEeCCeEEEEEEeCCCCcc
Q 005222 151 LQRREYLNAASIAGLRPLRLIHDCTATALGYGIYKTDFANGGKSYIAFVDIGHSDTQVSIVSFEAGHMKVLSHAFDSSLG 230 (708)
Q Consensus 151 ~qr~~l~~Aa~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~Gggt~dvsv~~~~~~~~~v~~~~~~~~lG 230 (708)
...+.+.+|++.|||++..++.||.|||++|+... .+...+++||+||||||++++. +|.+.. + ++.++|
T Consensus 168 ~~v~n~~~~~~~AGL~v~~lv~ep~Aaa~a~l~~~-----~~~~gv~vvDiGggttdisi~~--~g~~~~--~-~~i~~G 237 (419)
T 4a2a_A 168 KVYEMFYNFLQDTVKSPFQLKSSLVSTAEGVLTTP-----EKDRGVVVVNLGYNFTGLIAYK--NGVPIK--I-SYVPVG 237 (419)
T ss_dssp HHHHHHHHHHHTTSCSCEEEEEHHHHHHHHHCCHH-----HHHHCEEEEEECSSSEEEEEEE--TTEEEE--E-EEESCC
T ss_pred HHHHHHHHHHHHcCCcEEEEEEHHHHHHHHhhccc-----cccCCEEEEEECCCcEEEEEEE--CCEEEE--E-EecccH
Confidence 45678999999999999999999999999886432 2356799999999999999986 555432 2 367999
Q ss_pred hHHHHHHHHHHHHHHHHHhhcccccCCHHHHHHHHHHHHHhhhhcCCC-----CeeeEEeccccCCcceEEEeCHHHHHH
Q 005222 231 GRDFDDVLFGYFAAKFKEQYKINVYSNVRACIRLRAACEKLKKVLSAN-----AEAPLNIECLMDEKDVRGFIKREEFEE 305 (708)
Q Consensus 231 G~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~~e~~K~~Ls~~-----~~~~i~i~~l~~~~d~~~~itr~~fe~ 305 (708)
|++||+.|+..+. .. ...||++|+.++.. ....+.++.+. ......++|++|.+
T Consensus 238 G~~it~dIa~~l~--------~~-----------~~~AE~iK~~~g~a~~~~~~~~~i~v~~~~--~~~~~~is~~~l~~ 296 (419)
T 4a2a_A 238 MKHVIKDVSAVLD--------TS-----------FEESERLIITHGNAVYNDLKEEEIQYRGLD--GNTIKTTTAKKLSV 296 (419)
T ss_dssp HHHHHHHHHHHHT--------CC-----------HHHHHHHHHHHCCSCCTTCCCCEEEEECTT--SCSEEEEEHHHHHH
T ss_pred HHHHHHHHHHHHC--------CC-----------HHHHHHHHHHhccCcccCCCCceEEEeecC--CccceEEcHHHHHH
Confidence 9999999987542 21 37899999998642 34467777653 24677899999999
Q ss_pred HhhhhhHHHHHHHHHHHHHcCC------CCCCccEEEEecCCCChHHHHHHHHhHhCCCCCCC-----------------
Q 005222 306 LASGLTEKIAIPCRKALADAGL------HVDKIHSVEIVGSGSRIPAITRLLTSLFGREPRRS----------------- 362 (708)
Q Consensus 306 ~~~~~~~~i~~~i~~~l~~~~~------~~~~i~~ViLvGG~srip~v~~~l~~~fg~~v~~~----------------- 362 (708)
+++|.++++...+++.|+.++. ....++.|+|+||+|++|.+++++++.||.++...
T Consensus 297 ii~p~veei~~~V~~~L~~~~~~~p~~~~~~~~~~IvLtGG~s~lpgl~e~~~~~~g~~vri~~~~~~~p~~~~~~~~~~ 376 (419)
T 4a2a_A 297 IIHARLREIMSKSKKFFREVEAKIVEEGEIGIPGGVVLTGGGAKIPRINELATEVFKSPVRTGCYANSDRPSIINADEVA 376 (419)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCC--------TTCEEEESGGGGSTTHHHHHHHHHTSCEEECCGGGSSSCCCBTCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCcccccccccCCEEEEECchhchhhHHHHHHHHHCCCeEEEecCCCCchhccCccccc
Confidence 9999999999999999999987 34568999999999999999999999998665321
Q ss_pred CCchhhHhchHHHHHHHh
Q 005222 363 LNASECVARGCALQCAML 380 (708)
Q Consensus 363 ~n~~eava~GAa~~a~~~ 380 (708)
.+|..+.+.|.+++++..
T Consensus 377 ~~P~~~t~~Gl~~~~~~~ 394 (419)
T 4a2a_A 377 NDPSFAAAFGNVFAVSEN 394 (419)
T ss_dssp TCGGGHHHHHTTCC----
T ss_pred CCchHHHHHHHHHHHhhc
Confidence 378999999999887643
No 20
>3h0x_A 78 kDa glucose-regulated protein homolog; structural genomics, APC89502.3, peptide binding, chaperone, BIP, PSI-2; 1.92A {Saccharomyces cerevisiae} PDB: 1ckr_A 7hsc_A
Probab=99.91 E-value=1.1e-23 Score=194.15 Aligned_cols=147 Identities=18% Similarity=0.287 Sum_probs=128.0
Q ss_pred EeeccceeeEEEecCCCcccCCCcceEEecCCCCcCceEEEEeeeccc----eEEEEEEeCCCCCCCCCCccceeEEeCC
Q 005222 391 VQDCNPYSIGISSDEGPICIGSNTNGEVFPKGQPIPCVKVLTLQRSSL----FHLELFYTNPNELPPGISSKVSCFTIGP 466 (708)
Q Consensus 391 ~~d~~~~~i~i~~~~~~~~~~~~~~~~l~~~~~~~P~~k~~~~~~~~~----~~i~~~~~~~~~~~~~~~~~ig~~~i~~ 466 (708)
+.|++||+||+++.+ +.+.+|||||+++|++++.+|++..| +.|.+++ |++..+.+|.+||+|.|.|
T Consensus 2 ~~Dv~p~slGi~~~g-------g~~~~lI~rnt~iP~~k~~~f~t~~d~Q~~v~i~Vyq--Ge~~~~~dn~~LG~f~l~g 72 (152)
T 3h0x_A 2 NADVNALTLGIETTG-------GVMTPLIKRNTAIPTKKSQIFSTAVDNQPTVMIKVYE--GERAMSKDNNLLGKFELTG 72 (152)
T ss_dssp -CCBCSSCEEEEETT-------TEEEEEECTTCBSSEEEEEEECCSSTTCCCEEEEEEE--SSCSBGGGSEEEEEEEECC
T ss_pred ccceeccEEEEEEcC-------CEEEEEEECcCccCEEEEEEEEeCCCCcceeeeeEEE--cCccccccCcEEEEEEEeC
Confidence 579999999999986 47899999999999999999998665 4666643 3333358999999999999
Q ss_pred CCCCCCCcceeEEEEEEcCCeeEEEEEeeeeeccCCCCcccccccccccccccccccCCCCCccccccccccccccCCCC
Q 005222 467 FQGSNSENAKVKVTVKLNLHGIVSVESAWLIEGHGDDPVTKHNARSKMDKMESEGVSIDSSTTVEDVQDSASVQSKSSHS 546 (708)
Q Consensus 467 i~~~~~~~~~i~v~~~ld~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 546 (708)
+||++.|.++|+|+|.+|.||+|+|++.+
T Consensus 73 ipp~p~G~~~I~Vtf~iD~nGiL~V~a~d--------------------------------------------------- 101 (152)
T 3h0x_A 73 IPPAPRGVPQIEVTFALDANGILKVSATD--------------------------------------------------- 101 (152)
T ss_dssp CCCCCTTCSCEEEEEEECTTSEEEEEEEE---------------------------------------------------
T ss_pred CCCCCCCCceEEEEEEEcCCCEEEEEEEE---------------------------------------------------
Confidence 99999999999999999999999999974
Q ss_pred ccccccccccceeeeEEEeeeccCCCCHHHHHHHHHHHHHHhhcchhHHHHHHHhhhHH
Q 005222 547 SAVSVVRDKAGRRLDISISETIYGGMTKPELALAQETENLLAQQDITMEQTKDKKNALE 605 (708)
Q Consensus 547 ~~~~~~~k~~~~~~~l~i~~~~~~~ls~~e~~~~~~~~~~~~~~D~~~~~~~~a~N~LE 605 (708)
+.+++...++|+... ++||+++++++++++.+|..+|++.+++.++||+||
T Consensus 102 -------~~tg~~~~i~I~~~~-~~ls~~ei~~~~~~a~~~~~~D~~~~~~~~~~n~le 152 (152)
T 3h0x_A 102 -------KGTGKSESITITNDK-GRLTQEEIDRMVEEAEKFASEDASIKAKVESRNKLE 152 (152)
T ss_dssp -------TTTCCEEEEEEECCT-TCCCHHHHHHHHHHHHHTHHHHHHHHHHHHCSCCCC
T ss_pred -------cCCCcEeEEEEecCC-CCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcC
Confidence 344566788888765 579999999999999999999999999999999987
No 21
>3dob_A Heat shock 70 kDa protein F44E5.5; structural genomics, APC90015.11, peptide-binding domain, HS 2, protein structure initiative; 2.39A {Caenorhabditis elegans}
Probab=99.90 E-value=1.2e-23 Score=193.71 Aligned_cols=147 Identities=16% Similarity=0.287 Sum_probs=124.1
Q ss_pred EeeccceeeEEEecCCCcccCCCcceEEecCCCCcCceEEEEeeeccc----eEEEEEEeCCCCCCCCCCccceeEEeCC
Q 005222 391 VQDCNPYSIGISSDEGPICIGSNTNGEVFPKGQPIPCVKVLTLQRSSL----FHLELFYTNPNELPPGISSKVSCFTIGP 466 (708)
Q Consensus 391 ~~d~~~~~i~i~~~~~~~~~~~~~~~~l~~~~~~~P~~k~~~~~~~~~----~~i~~~~~~~~~~~~~~~~~ig~~~i~~ 466 (708)
+.|++||+||++|.+ +.+.+|||||+++|++++.+|++..| +.|.+| +|++..+.+|.+||+|.|.|
T Consensus 2 ~~Dv~p~slGie~~g-------g~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~I~Vy--qGe~~~~~dn~~LG~f~l~g 72 (152)
T 3dob_A 2 NADVAPLSLGIETAG-------GVMTNLIDRNTRIPTKACKTFTTYADNQPGVSIQVY--EGERAMTRDNHRLGTFELSG 72 (152)
T ss_dssp --CBCSSCEEEEETT-------TEEEEEECTTCBSSEEEEEEEEESSTTCCEEEEEEE--ESSCSBGGGSEEEEEEEEEC
T ss_pred ceeeecceEEEEEcC-------CEEEEEEECcCccCEEEEEEEEECCCCceEEEEEEE--EcCccccccCceeEEEEEeC
Confidence 679999999999986 47899999999999999999998665 456663 33443458999999999999
Q ss_pred CCCCCCCcceeEEEEEEcCCeeEEEEEeeeeeccCCCCcccccccccccccccccccCCCCCccccccccccccccCCCC
Q 005222 467 FQGSNSENAKVKVTVKLNLHGIVSVESAWLIEGHGDDPVTKHNARSKMDKMESEGVSIDSSTTVEDVQDSASVQSKSSHS 546 (708)
Q Consensus 467 i~~~~~~~~~i~v~~~ld~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 546 (708)
+||++.|.++|+|+|.+|.||+|+|++.+
T Consensus 73 ipp~p~G~~~IeVtf~iD~nGiL~Vsa~d--------------------------------------------------- 101 (152)
T 3dob_A 73 IPPAPRGVPQIEVTFNIDANGILNVSAED--------------------------------------------------- 101 (152)
T ss_dssp CCCCCTTCCCEEEEEEECTTCCEEEEEEE---------------------------------------------------
T ss_pred CCCCCCCCceEEEEEEeCCCCeEEEEEEE---------------------------------------------------
Confidence 99999999999999999999999999973
Q ss_pred ccccccccccceeeeEEEeeeccCCCCHHHHHHHHHHHHHHhhcchhHHHHHHHhhhHH
Q 005222 547 SAVSVVRDKAGRRLDISISETIYGGMTKPELALAQETENLLAQQDITMEQTKDKKNALE 605 (708)
Q Consensus 547 ~~~~~~~k~~~~~~~l~i~~~~~~~ls~~e~~~~~~~~~~~~~~D~~~~~~~~a~N~LE 605 (708)
+.+++...++|+... +.||+++++++.++..++..+|++.+++.++||.||
T Consensus 102 -------~~tg~~~~i~I~~~~-~~Ls~~ei~~~~~~a~~~~~~D~~~~~~~~~~n~le 152 (152)
T 3dob_A 102 -------KSTGKSNRITIQNEK-GRLTQSDIDRMVHEAKQFEKEDGEQRERVQARNQLE 152 (152)
T ss_dssp -------TTTCCEEEEEECCC-----CHHHHHHHHHHHHHTHHHHHHHHHTCCCCSEEC
T ss_pred -------cCCCCEEEEEEEcCC-CCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcC
Confidence 345566788888765 579999999999999999999999999999999986
No 22
>3dqg_A Heat shock 70 kDa protein F; structural genomics, APC90008.12, HSP70 protein, peptide-BIN domain, PSI-2, protein structure initiative; 1.72A {Caenorhabditis elegans}
Probab=99.89 E-value=2e-23 Score=191.82 Aligned_cols=146 Identities=18% Similarity=0.271 Sum_probs=126.0
Q ss_pred EeeccceeeEEEecCCCcccCCCcceEEecCCCCcCceEEEEeeeccc----eEEEEEEeCCCCCCCCCCccceeEEeCC
Q 005222 391 VQDCNPYSIGISSDEGPICIGSNTNGEVFPKGQPIPCVKVLTLQRSSL----FHLELFYTNPNELPPGISSKVSCFTIGP 466 (708)
Q Consensus 391 ~~d~~~~~i~i~~~~~~~~~~~~~~~~l~~~~~~~P~~k~~~~~~~~~----~~i~~~~~~~~~~~~~~~~~ig~~~i~~ 466 (708)
+.|++||+||++|.+ +.+.+|||||+++|++++.+|++..| +.|.+|+ |++..+.+|.+||+|.|.|
T Consensus 2 ~~DV~p~slGie~~g-------g~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~i~Vyq--Ge~~~~~dn~~LG~f~l~g 72 (151)
T 3dqg_A 2 NADVTPLSLGIETLG-------GIMTKLITRNTTIPTKKSQVFSTAADGQTQVQIKVFQ--GEREMATSNKLLGQFSLVG 72 (151)
T ss_dssp --CBCSSCEEEEETT-------TEEEEEECTTCBSSEEEEEEEEESSTTCCEEEEEEEE--SSCSBGGGSEEEEEEEEEC
T ss_pred cceeeeeEEEEEEcC-------CEEEEEEECcCccCEEEEEEEEECCCCcceEEEEEEE--cCCcccccCcEEEEEEEeC
Confidence 579999999999986 47899999999999999999998665 5666633 3433358999999999999
Q ss_pred CCCCCCCcceeEEEEEEcCCeeEEEEEeeeeeccCCCCcccccccccccccccccccCCCCCccccccccccccccCCCC
Q 005222 467 FQGSNSENAKVKVTVKLNLHGIVSVESAWLIEGHGDDPVTKHNARSKMDKMESEGVSIDSSTTVEDVQDSASVQSKSSHS 546 (708)
Q Consensus 467 i~~~~~~~~~i~v~~~ld~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 546 (708)
+||++.|.++|+|+|.+|.||+|+|++.+
T Consensus 73 ipp~p~G~~~IeVtf~iD~nGiL~Vsa~d--------------------------------------------------- 101 (151)
T 3dqg_A 73 IPPAPRGVPQVEVTFDIDANGIVNVSARD--------------------------------------------------- 101 (151)
T ss_dssp CCCCCTTCSCEEEEEEECTTSEEEEEEEE---------------------------------------------------
T ss_pred CCCCCCCCcEEEEEEEeccCcEEEEEEEE---------------------------------------------------
Confidence 99999999999999999999999999973
Q ss_pred ccccccccccceeeeEEEeeeccCCCCHHHHHHHHHHHHHHhhcchhHHHHHHHhhhHH
Q 005222 547 SAVSVVRDKAGRRLDISISETIYGGMTKPELALAQETENLLAQQDITMEQTKDKKNALE 605 (708)
Q Consensus 547 ~~~~~~~k~~~~~~~l~i~~~~~~~ls~~e~~~~~~~~~~~~~~D~~~~~~~~a~N~LE 605 (708)
+.+++...+.|+.. .+||++++++++++.+++..+|++.+++.++||.||
T Consensus 102 -------~~tg~~~~i~I~~~--~~Ls~~ei~~~~~~a~~~~~~D~~~~~~~~~~n~~e 151 (151)
T 3dqg_A 102 -------RGTGKEQQIVIQSS--GGLSKDQIENMIKEAEKNAAEDAKRKELVEVINQAE 151 (151)
T ss_dssp -------TTTCCEEEEEEECS--SSSCHHHHHHHHHHHHHHHHHHTTCCCEEECBCCCC
T ss_pred -------ccCCCEeEEEEecC--CCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhcC
Confidence 34456678888865 579999999999999999999999999999999986
No 23
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=99.88 E-value=7.7e-23 Score=215.36 Aligned_cols=227 Identities=13% Similarity=0.086 Sum_probs=149.7
Q ss_pred eeecHHHHHHHHHHHHHHHHHhhcCCCcceEEEEecCC-CCHH--HH--HHHHHH------------HHHcCCcceeeec
Q 005222 110 HTFCPVQVMGMLFSHLKDVAEKNLEMPVVDCVIGVPSY-FTDL--QR--REYLNA------------ASIAGLRPLRLIH 172 (708)
Q Consensus 110 ~~~~~~el~a~~L~~l~~~a~~~~~~~~~~~VitVPa~-~~~~--qr--~~l~~A------------a~~AGl~~~~li~ 172 (708)
..+++..+++.+ ..|+. +. ..+.+ ..+|+++|.. |... || +++.+- ++.+++..+.+++
T Consensus 72 ~~~~~~~l~~i~-~aL~~-~~-~~~~~-~~lv~glP~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~ 147 (320)
T 2zgy_A 72 WQYSDVNVVAVH-HALLT-SG-LPVSE-VDIVCTLPLTEYYDRNNQPNTENIERKKANFRKKITLNGGDTFTIKDVKVMP 147 (320)
T ss_dssp GGGSHHHHHHHH-HHHHH-HS-CCSCE-EEEEEEECHHHHBCTTSSBCHHHHHHHHHHTTSCEEETTBCCCEEEEEEEEE
T ss_pred ccchHHHHHHHH-HHHHH-cC-CCCce-EEEEEcCCHHHHccCCCcccHHHHHHHHHhhcCcEecCCCcEEEEEEEEEec
Confidence 356777777654 45543 21 12222 3699999987 6531 21 222221 2344567889999
Q ss_pred chHHHHHhccccccCCCCCCceEEEEEEeCCcceEEEEEEEeCCeEEEEEEeCCCCcchHHHHHHHHHHHHHHHHHhhcc
Q 005222 173 DCTATALGYGIYKTDFANGGKSYIAFVDIGHSDTQVSIVSFEAGHMKVLSHAFDSSLGGRDFDDVLFGYFAAKFKEQYKI 252 (708)
Q Consensus 173 Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~Gggt~dvsv~~~~~~~~~v~~~~~~~~lGG~~id~~l~~~l~~~~~~~~~~ 252 (708)
||.||+++|+... .++..++|+|+||||||+++++ ++.+.+.++.++.++||.+||+.|++++.++ +.
T Consensus 148 e~~aa~~~~~~~~-----~~~~~~~vvDiGggttd~~v~~--~g~~~v~~~~~~~~lGg~~~~~~I~~~l~~~-----~~ 215 (320)
T 2zgy_A 148 ESIPAGYEVLQEL-----DELDSLLIIDLGGTTLDISQVM--GKLSGISKIYGDSSLGVSLVTSAVKDALSLA-----RT 215 (320)
T ss_dssp SSHHHHHHHHHHS-----CTTCEEEEEEECSSCEEEEEEE--GGGCCEEEEEEECSCCTHHHHHHHHHHTTCC-----SB
T ss_pred CcHHHHHhhhccc-----cCCCCEEEEEcCCCeEEEEEEe--CCeeEEeeecCCccccHHHHHHHHHHHHHHc-----CC
Confidence 9999999886321 3467899999999999999987 5555566666788999999999999888632 33
Q ss_pred cccCCHHHHHHHHHHHHHh-hhhcCCCCeeeEEeccccCCcceEEEeCHHHHHHHhhhhhHHHHHHHHHHHHHcCCCCCC
Q 005222 253 NVYSNVRACIRLRAACEKL-KKVLSANAEAPLNIECLMDEKDVRGFIKREEFEELASGLTEKIAIPCRKALADAGLHVDK 331 (708)
Q Consensus 253 ~~~~~~~~~~rL~~~~e~~-K~~Ls~~~~~~i~i~~l~~~~d~~~~itr~~fe~~~~~~~~~i~~~i~~~l~~~~~~~~~ 331 (708)
++.. ..++++ |..- ... ......+ . .-.++++.+++++.++++...|.+.+++. .+
T Consensus 216 ~i~~---------~~ae~~lk~~~---~~~--~~~~~i~---~--~~~~~~~~~~i~~~~~~~~~~i~~~i~~~----~~ 272 (320)
T 2zgy_A 216 KGSS---------YLADDIIIHRK---DNN--YLKQRIN---D--ENKISIVTEAMNEALRKLEQRVLNTLNEF----SG 272 (320)
T ss_dssp GGGH---------HHHHHHHHTTT---CHH--HHHHHSS---S--SCTHHHHHHHHHHHHHHHHHHHHHHHTTC----CC
T ss_pred CCCH---------HHHHHHHHHhh---hhh--cccceec---C--chhhHHHHHHHHHHHHHHHHHHHHHHHhh----cC
Confidence 3321 234444 3320 000 0000000 0 01345666666666666666666666542 47
Q ss_pred ccEEEEecCCCChHHHHHHHHhHhCC---CCCCCCCchhhHhchHHHHH
Q 005222 332 IHSVEIVGSGSRIPAITRLLTSLFGR---EPRRSLNASECVARGCALQC 377 (708)
Q Consensus 332 i~~ViLvGG~srip~v~~~l~~~fg~---~v~~~~n~~eava~GAa~~a 377 (708)
++.|+|+||+|++ +++.|++.|+. ++....||++|+|+||+++|
T Consensus 273 ~~~vvl~GGga~l--l~~~l~~~~~~~~~~~~~~~~P~~a~A~G~~~~~ 319 (320)
T 2zgy_A 273 YTHVMVIGGGAEL--ICDAVKKHTQIRDERFFKTNNSQYDLVNGMYLIG 319 (320)
T ss_dssp CCEEEEESTTHHH--HHHHHHHTSCCCGGGEECCSCGGGHHHHHHHHHH
T ss_pred CCeEEEECChHHH--HHHHHHHHhCCCCCceeeCCCcHHHHHHHHHHhc
Confidence 8999999999998 99999999986 57788999999999999875
No 24
>2op6_A Heat shock 70 kDa protein D; HSP70/peptide-binding domain, structural genomics, APC90014. 2, protein structure initiative; 1.85A {Caenorhabditis elegans}
Probab=99.88 E-value=4e-22 Score=185.09 Aligned_cols=147 Identities=15% Similarity=0.266 Sum_probs=126.0
Q ss_pred EeeccceeeEEEecCCCcccCCCcceEEecCCCCcCceEEEEeeeccc----eEEEEEEeCCCCCCCCCCccceeEEeCC
Q 005222 391 VQDCNPYSIGISSDEGPICIGSNTNGEVFPKGQPIPCVKVLTLQRSSL----FHLELFYTNPNELPPGISSKVSCFTIGP 466 (708)
Q Consensus 391 ~~d~~~~~i~i~~~~~~~~~~~~~~~~l~~~~~~~P~~k~~~~~~~~~----~~i~~~~~~~~~~~~~~~~~ig~~~i~~ 466 (708)
+.|++||+||+++.+ +.+.+||+||+++|++++.+|++..| +.|.+++++ +..+.+|.+||+|.|.+
T Consensus 2 v~Dv~p~slGi~~~~-------g~~~~li~rnt~iP~~k~~~f~t~~d~Q~~v~i~v~qGe--~~~~~~n~~lg~~~l~g 72 (152)
T 2op6_A 2 NADVNPLTLGIETVG-------GVMTKLIGRNTVIPTKKSQVFSTAADSQSAVSIVIYEGE--RPMVMDNHKLGNFDVTG 72 (152)
T ss_dssp -CCBCSSCEEEEETT-------TEEEEEECTTCBSSEEEEEEEEESSTTCCCEEEEEEESS--CSBGGGSEEEEEEEECC
T ss_pred ceEeecccEEEEEeC-------CEEEEEEeCCCcccEeEEEEEEeCCCCCcEEEEEEEEeC--CccCccCCEeEEEEEEC
Confidence 579999999999986 47899999999999999999998665 777776643 33347899999999999
Q ss_pred CCCCCCCcceeEEEEEEcCCeeEEEEEeeeeeccCCCCcccccccccccccccccccCCCCCccccccccccccccCCCC
Q 005222 467 FQGSNSENAKVKVTVKLNLHGIVSVESAWLIEGHGDDPVTKHNARSKMDKMESEGVSIDSSTTVEDVQDSASVQSKSSHS 546 (708)
Q Consensus 467 i~~~~~~~~~i~v~~~ld~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 546 (708)
+|+++.|.++|+|+|.+|.||+|+|++.+
T Consensus 73 ipp~p~G~~~I~V~f~id~nGiL~V~a~d--------------------------------------------------- 101 (152)
T 2op6_A 73 IPPAPRGVPQIEVTFEIDVNGILHVSAED--------------------------------------------------- 101 (152)
T ss_dssp CCCCCTTCSCEEEEEEECTTSCEEEEEEE---------------------------------------------------
T ss_pred CCCCCCCCceEEEEEEECCCcEEEEEEEE---------------------------------------------------
Confidence 99999999999999999999999999973
Q ss_pred ccccccccccceeeeEEEeeeccCCCCHHHHHHHHHHHHHHhhcchhHHHHHHHhhhHH
Q 005222 547 SAVSVVRDKAGRRLDISISETIYGGMTKPELALAQETENLLAQQDITMEQTKDKKNALE 605 (708)
Q Consensus 547 ~~~~~~~k~~~~~~~l~i~~~~~~~ls~~e~~~~~~~~~~~~~~D~~~~~~~~a~N~LE 605 (708)
+.+++...++|+... ++||+++++++.+++.+|..+|+..+++.++||+||
T Consensus 102 -------~~tg~~~~i~i~~~~-~~ls~eei~~~~~~~~~~~~~d~~~~~~~~~kn~~e 152 (152)
T 2op6_A 102 -------KGTGNKNKLTITNDH-NRLSPEDIERMINDADKFAADDQAQKEKVESRNELE 152 (152)
T ss_dssp -------TTTCCEEEEEECSSS-SCCCHHHHHHHHHHHHHTHHHHHHHHHHSCCCSEEC
T ss_pred -------ecCCcEEEEEeeccc-cCCCHHHHHHHHHHHHHhHhccHHHHHHHHHHhhcC
Confidence 122345577777654 579999999999999999999999999999999986
No 25
>1k8k_B ARP2, actin-like protein 2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 PDB: 1tyq_B* 1u2v_B* 2p9i_B* 2p9l_B 2p9n_B* 2p9p_B* 2p9s_B* 2p9u_B* 3dxk_B* 3dxm_B* 3rse_B 2p9k_B*
Probab=99.79 E-value=2e-20 Score=202.44 Aligned_cols=214 Identities=14% Similarity=0.148 Sum_probs=91.9
Q ss_pred ceEEEEecCCCCHHHHHHHHHHH-HHcCCcceeeecchHHHHHhccccccCCCCCCceEEEEEEeCCcceEEEEEEEeCC
Q 005222 138 VDCVIGVPSYFTDLQRREYLNAA-SIAGLRPLRLIHDCTATALGYGIYKTDFANGGKSYIAFVDIGHSDTQVSIVSFEAG 216 (708)
Q Consensus 138 ~~~VitVPa~~~~~qr~~l~~Aa-~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~Gggt~dvsv~~~~~~ 216 (708)
..++||+|++++..+|+++.+++ +.+|++.+.++++|.||+++++. ...+|+|+|+|+|+++.+. +|
T Consensus 105 ~~vllt~p~~~~~~~r~~~~e~~fe~~~~~~~~~~~~~~~a~~a~g~----------~~~lVVDiG~g~T~v~pv~--~G 172 (394)
T 1k8k_B 105 CKILLTEPPMNPTKNREKIVEVMFETYQFSGVYVAIQAVLTLYAQGL----------LTGVVVDSGDGVTHICPVY--EG 172 (394)
T ss_dssp -----------------------------------------------------------CCEEEECSSCEEEECEE--TT
T ss_pred CcEEEEECCCCCHHHHHHHHHHhhhccCCCeEEEEhhHHHHHHhCCC----------ceEEEEEcCCCceEeeeeE--CC
Confidence 35999999999999999988865 78899999999999999988763 3569999999999998764 44
Q ss_pred eEEEEEEeCCCCcchHHHHHHHHHHHHHHHHHhhcccccCCHHHHHHHHHHHHHhhhhcCCCC----------------e
Q 005222 217 HMKVLSHAFDSSLGGRDFDDVLFGYFAAKFKEQYKINVYSNVRACIRLRAACEKLKKVLSANA----------------E 280 (708)
Q Consensus 217 ~~~v~~~~~~~~lGG~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~~e~~K~~Ls~~~----------------~ 280 (708)
.. +.......++||+++|+.|.+++..+ .+......+ ...++++|+.+.... .
T Consensus 173 ~~-~~~~~~~~~~GG~~lt~~l~~~l~~~---~~~~~~~~~-------~~~ae~iK~~~~~v~~d~~~~~~~~~~~~~~~ 241 (394)
T 1k8k_B 173 FS-LPHLTRRLDIAGRDITRYLIKLLLLR---GYAFNHSAD-------FETVRMIKEKLCYVGYNIEQEQKLALETTVLV 241 (394)
T ss_dssp EE-CSTTCEEESCCHHHHHHHHHHHHHHT---TCCCCTTTT-------HHHHHHHHHHHCCCCSSHHHHHHHHHHCSTTC
T ss_pred EE-cccceEEeeccHHHHHHHHHHHHHhc---CCCCCcHHH-------HHHHHHHHHhheeEecCHHHHHHhhccCCcCc
Confidence 33 22112246899999999999998753 122211111 144566666653221 1
Q ss_pred eeEEeccccCCcceEEEeCHHHHH---HHhhhh-----hHHHHHHHHHHHHHcCC--CCCCccEEEEecCCCChHHHHHH
Q 005222 281 APLNIECLMDEKDVRGFIKREEFE---ELASGL-----TEKIAIPCRKALADAGL--HVDKIHSVEIVGSGSRIPAITRL 350 (708)
Q Consensus 281 ~~i~i~~l~~~~d~~~~itr~~fe---~~~~~~-----~~~i~~~i~~~l~~~~~--~~~~i~~ViLvGG~srip~v~~~ 350 (708)
..+.++ ++ ..+.|+++.|. -+++|. ...+.+.|.+.|..+.. ...-++.|+|+||+|++|.+.++
T Consensus 242 ~~~~lp---dg--~~i~i~~erf~~~E~Lf~p~~~~~~~~~i~~~i~~~i~~~~~d~r~~l~~nIvLtGG~s~~~G~~~r 316 (394)
T 1k8k_B 242 ESYTLP---DG--RIIKVGGERFEAPEALFQPHLINVEGVGVAELLFNTIQAADIDTRSEFYKHIVLSGGSTMYPGLPSR 316 (394)
T ss_dssp EEEECT---TS--CEEEECTHHHHTGGGGTCGGGGTCCSCCHHHHHHHHHHHSCTTTHHHHHTTCEEESGGGCSTTHHHH
T ss_pred eEEECC---CC--CEEEECchhhcChHhhCCchhccCCCCCHHHHHHHHHHhCCHHHHHHHHhCEEEeCcccccccHHHH
Confidence 122232 22 25678888773 333332 34577888888888642 23335789999999999999999
Q ss_pred HHhHhCC-----------------CC--CCCCCchhhHhchHHHHHHH
Q 005222 351 LTSLFGR-----------------EP--RRSLNASECVARGCALQCAM 379 (708)
Q Consensus 351 l~~~fg~-----------------~v--~~~~n~~eava~GAa~~a~~ 379 (708)
|.+.++. ++ ..+.+|..++.+|++++|..
T Consensus 317 l~~el~~~~~~~~~~~~~~~p~~~~v~v~~~~~~~~~~w~Ggsilasl 364 (394)
T 1k8k_B 317 LERELKQLYLERVLKGDVEKLSKFKIRIEDPPRRKHMVFLGGAVLADI 364 (394)
T ss_dssp HHHHHHHHHHHHTCSSCCCTTCCCCC----------------------
T ss_pred HHHHHHHHHhhhhcccccCCCCceEEEEecCCCcceeEEhhhHHhhCC
Confidence 9887742 22 22556788999999998863
No 26
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=99.78 E-value=1.1e-18 Score=179.76 Aligned_cols=186 Identities=17% Similarity=0.155 Sum_probs=124.0
Q ss_pred HcCCcceeeecchHHHHHhccccccCCCCCCceEEEEEEeCCcceEEEEEEEeCCeEEEEEEeCCCCcchHHHHHHHHHH
Q 005222 162 IAGLRPLRLIHDCTATALGYGIYKTDFANGGKSYIAFVDIGHSDTQVSIVSFEAGHMKVLSHAFDSSLGGRDFDDVLFGY 241 (708)
Q Consensus 162 ~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~Gggt~dvsv~~~~~~~~~v~~~~~~~~lGG~~id~~l~~~ 241 (708)
.++...+..|+|++|.++++.... +....|+|+|||+++++++. .++.+.+....+++..||.+|++.++++
T Consensus 68 ~a~~~~~~~Vne~~aha~a~~~~~-------~~~~~vl~lgG~~~~~~~~~-~~g~~~~~~~~~~~~~g~G~f~d~~a~~ 139 (276)
T 4ehu_A 68 MNYSDADKQISELSCHARGVNFII-------PETRTIIDIGGQDAKVLKLD-NNGRLLNFLMNDKCAAGTGRFLDVMAKI 139 (276)
T ss_dssp GGCCSCSEECCHHHHHHHHHHHHS-------TTCCEEEEECSSCEEEEEEC-TTSCEEEEEEECSCSTTSHHHHHHHHHH
T ss_pred HHhhCCCcccchHHHHHHHHHHhC-------CCCCeEEEEcCCCceEEEEE-ecCceEEEEeCCCcCcchhhHHHHHHHH
Confidence 366778899999999998876543 22347899999999999884 5678888888889999999999999888
Q ss_pred HHHHHHHhhcccccCCHHHHHHHHHHHHHhhhh--cCCCCeeeEEeccccCCcce-EEEeCHHHHHHHhhhhhHHHHHHH
Q 005222 242 FAAKFKEQYKINVYSNVRACIRLRAACEKLKKV--LSANAEAPLNIECLMDEKDV-RGFIKREEFEELASGLTEKIAIPC 318 (708)
Q Consensus 242 l~~~~~~~~~~~~~~~~~~~~rL~~~~e~~K~~--Ls~~~~~~i~i~~l~~~~d~-~~~itr~~fe~~~~~~~~~i~~~i 318 (708)
+.-.+..... .+..++.. ++..... ... .++ ...-.....++++..+.+.+.+.+
T Consensus 140 l~~~~~~~~~---------------~~~~a~~~~~i~~~~~~--f~~-----s~~~~~~~~~~~~~di~a~~~~~v~~~l 197 (276)
T 4ehu_A 140 IEVDVSELGS---------------ISMNSQNEVSISSTCTV--FAE-----SEVISHLSENAKIEDIVAGIHTSVAKRV 197 (276)
T ss_dssp HTCCGGGHHH---------------HHTTCSSCCCCCCCSHH--HHH-----HHHHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred hccChhhhHH---------------HHhcCCCCCCcCCccch--hhh-----hHHHHhhhccccHHHHHHHHHHHHHHHH
Confidence 7533221110 01111110 1100000 000 000 000000112455666666655555
Q ss_pred HHHHHHcCCCCCCccEEEEecCCCChHHHHHHHHhHhCCCCCCCCCchhhHhchHHHHHHHhC
Q 005222 319 RKALADAGLHVDKIHSVEIVGSGSRIPAITRLLTSLFGREPRRSLNASECVARGCALQCAMLS 381 (708)
Q Consensus 319 ~~~l~~~~~~~~~i~~ViLvGG~srip~v~~~l~~~fg~~v~~~~n~~eava~GAa~~a~~~~ 381 (708)
....... ..++.|+|+||.+++|.|++.+++.||.++..+.||++++|+|||++|....
T Consensus 198 ~~~~~~~----~~~~~vvl~GGva~n~~lr~~l~~~~g~~~~~p~~p~~~~A~GAAl~A~~~~ 256 (276)
T 4ehu_A 198 SSLVKRI----GVQRNVVMVGGVARNSGIVRAMAREINTEIIVPDIPQLTGALGAALYAFDEA 256 (276)
T ss_dssp HHHHHHH----CCCSSEEEESGGGGCHHHHHHHHHHHTSCEECCSSGGGHHHHHHHHHHHHHH
T ss_pred HHHHHhc----ccCCeEEEecCccchHHHHHHHHHHHCCCeeeCCCcchHHHHHHHHHHHHHH
Confidence 5544443 2567899999999999999999999999999999999999999999997543
No 27
>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus}
Probab=99.70 E-value=4.4e-17 Score=172.78 Aligned_cols=208 Identities=14% Similarity=0.169 Sum_probs=141.0
Q ss_pred ceEEEEecCCCCHHHH-HHHHHHHHHcCC------------cceeeecchHHHHHhccccccCCCCC---CceEEEEEEe
Q 005222 138 VDCVIGVPSYFTDLQR-REYLNAASIAGL------------RPLRLIHDCTATALGYGIYKTDFANG---GKSYIAFVDI 201 (708)
Q Consensus 138 ~~~VitVPa~~~~~qr-~~l~~Aa~~AGl------------~~~~li~Ep~Aaal~y~~~~~~~~~~---~~~~vlv~D~ 201 (708)
..+++++|..+...+| +++++++...+- ..+.+++||.||+++++.... +.. .+..++|+|+
T Consensus 114 ~~lvvGLP~~~~~~~k~~~l~~~l~~~~~v~~~g~~~~i~I~~V~v~pE~~~a~~~~~~~~~--~~~~~~~~~~~~vvDi 191 (355)
T 3js6_A 114 VVIATGMPSNEIGTDKQAKFEKLLNKSRLIEIDGIAKTINVKGVKIVAQPMGTLLDLNMENG--KVFKAFTEGKYSVLDF 191 (355)
T ss_dssp EEEEEEECGGGTTSHHHHHHHHHHSSCEEEEETTEEEEEEEEEEEEEEHHHHHHHHTTEETT--EECHHHHTCEEEEEEE
T ss_pred EEEEEeCCHHHHhHHHHHHHHHHhCCCeEEEECCEEEEEEEEEEEEEeCcHHHHHHHHHccC--ccccccccCcEEEEEe
Confidence 3799999999988887 589998875543 567899999999999876431 101 3678999999
Q ss_pred CCcceEEEEEEEeCCeEEEEEEeCCCCcchHHHHHHHHHHHHHHHHHhhcccccCCHHHHHHHHHHHHHhhhhcCCCCee
Q 005222 202 GHSDTQVSIVSFEAGHMKVLSHAFDSSLGGRDFDDVLFGYFAAKFKEQYKINVYSNVRACIRLRAACEKLKKVLSANAEA 281 (708)
Q Consensus 202 Gggt~dvsv~~~~~~~~~v~~~~~~~~lGG~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~~e~~K~~Ls~~~~~ 281 (708)
||||||++++ .++.+ +....+...+||..+++.|.+++.+++. +..+. . ...++.+.
T Consensus 192 GggTtd~~v~--~~~~~-~~~~s~s~~~G~~~~~~~i~~~l~~~~~---g~~l~--~-------~~i~~g~~-------- 248 (355)
T 3js6_A 192 GSGTTIIDTY--QNMKR-VEEESFVINKGTIDFYKRIASHVSKKSE---GASIT--P-------RMIEKGLE-------- 248 (355)
T ss_dssp CSSCEEEEEE--ETTEE-CGGGCEEESCCHHHHHHHHHHHTC-----------C--H-------HHHHSCCC--------
T ss_pred CCCcEEEEEE--cCCEE-ccccccCcchHHHHHHHHHHHHHHHhcC---CCcCC--H-------HHHhcCCc--------
Confidence 9999999998 34433 1112234679999999999999876531 22222 1 11111111
Q ss_pred eEEeccccCCcceEEEeCHHHHHHHhhhhhHHHHHHHHHHHHHcCCCCCCccEEEEecCCCChHH--HHHHHHhHhCCCC
Q 005222 282 PLNIECLMDEKDVRGFIKREEFEELASGLTEKIAIPCRKALADAGLHVDKIHSVEIVGSGSRIPA--ITRLLTSLFGREP 359 (708)
Q Consensus 282 ~i~i~~l~~~~d~~~~itr~~fe~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~srip~--v~~~l~~~fg~~v 359 (708)
+.... .+..-.+.+ .+.+++.+++++++|...|++.+.+ ++.++.|+|+||++.++. +++.|++.|+.-
T Consensus 249 -~~~~~--~~~~k~~di-~~~i~~a~~~~~~~I~~~i~~~l~~----~~~~~~Ivl~GGGa~l~~~~l~~~i~~~~~~~- 319 (355)
T 3js6_A 249 -YKQCK--LNQKTVIDF-KDEFYKEQDSLIEEVMSNFEITVGN----INSIDRIIVTGGGANIHFDSLSHYYSDVFEKA- 319 (355)
T ss_dssp ----------------C-HHHHHHHHHHHHHHHHHHHHHHTCC----TTSCSEEEEESTTHHHHHHHHHHHSSSCEECC-
T ss_pred -ccccc--ccccccccH-HHHHHHHHHHHHHHHHHHHHHHhhc----hhhccEEEEECcchhcchhhHHHHHHHHCCCC-
Confidence 00000 000001112 3467777888888888888877753 456899999999999998 999999988542
Q ss_pred CCCCCchhhHhchHHHHHHHhCC
Q 005222 360 RRSLNASECVARGCALQCAMLSP 382 (708)
Q Consensus 360 ~~~~n~~eava~GAa~~a~~~~~ 382 (708)
.||..|+|+|+..++..+..
T Consensus 320 ---~~p~~anA~G~~~~~~~~~~ 339 (355)
T 3js6_A 320 ---DDSQFSNVRGYEKLGELLKN 339 (355)
T ss_dssp ---SSGGGHHHHHHHHHHHHHHH
T ss_pred ---CCcHHHHHHHHHHHHHHHHh
Confidence 89999999999999887643
No 28
>1q5l_A Chaperone protein DNAK; HSP70, chaperone, heat shock protein; NMR {Escherichia coli} SCOP: b.130.1.1
Probab=99.64 E-value=1.1e-15 Score=137.81 Aligned_cols=101 Identities=15% Similarity=0.238 Sum_probs=82.8
Q ss_pred ccceEEeeccceeeEEEecCCCcccCCCcceEEecCCCCcCceEEEEeeeccc----eEEEEEEeCCCCCCCCCCcccee
Q 005222 386 VREYEVQDCNPYSIGISSDEGPICIGSNTNGEVFPKGQPIPCVKVLTLQRSSL----FHLELFYTNPNELPPGISSKVSC 461 (708)
Q Consensus 386 ~~~~~~~d~~~~~i~i~~~~~~~~~~~~~~~~l~~~~~~~P~~k~~~~~~~~~----~~i~~~~~~~~~~~~~~~~~ig~ 461 (708)
++++.+.|++|++||+++.+ +.+.+||+||+++|++++.+|++..| +.|.+++++ +..+.+|..||+
T Consensus 14 ~~d~~l~Dv~p~slGIe~~~-------g~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~I~VyqGe--~~~~~~n~~Lg~ 84 (135)
T 1q5l_A 14 PRGSHMVDVTPLSLGIETMG-------GVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGE--RKRAADNKSLGQ 84 (135)
T ss_dssp -------CCCSSCCCEEETT-------TEECCSSCSSSCSSBCCEEEECCCSSSCSSCEEEEEECC--SSSCSSSEEEEE
T ss_pred eCcEEEEEeecCcEEEEEEC-------CEEEEEEcCCCeEeEeEeEEEEeccCCceEEEEEEEEeC--CcccccCcEEEE
Confidence 46789999999999999986 47899999999999999999987554 778876643 334578999999
Q ss_pred EEeCCCCCCCCCcceeEEEEEEcCCeeEEEEEee
Q 005222 462 FTIGPFQGSNSENAKVKVTVKLNLHGIVSVESAW 495 (708)
Q Consensus 462 ~~i~~i~~~~~~~~~i~v~~~ld~~G~l~v~~~~ 495 (708)
|.|.++|+++.|.++|+|+|++|.||+|+|++.+
T Consensus 85 f~l~gipp~p~G~~~IeVtf~iD~nGiL~V~a~d 118 (135)
T 1q5l_A 85 FNLDGINPAPRGMPQIEVTFDIDADGILHVSAKD 118 (135)
T ss_dssp EECCCCCSCCSSSCCEEEEEEECTTSEEEEEEEE
T ss_pred EEEeCCCCCCCceeEEEEEEEECCCCEEEEEEEE
Confidence 9999999999999999999999999999999973
No 29
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}
Probab=99.60 E-value=3.6e-16 Score=164.47 Aligned_cols=203 Identities=11% Similarity=0.093 Sum_probs=143.3
Q ss_pred ceEEEEecCCCCH--HHHHHHHHHHHHc--------C------CcceeeecchHHHHHhccccccCCCCCCceEEEEEEe
Q 005222 138 VDCVIGVPSYFTD--LQRREYLNAASIA--------G------LRPLRLIHDCTATALGYGIYKTDFANGGKSYIAFVDI 201 (708)
Q Consensus 138 ~~~VitVPa~~~~--~qr~~l~~Aa~~A--------G------l~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~ 201 (708)
..+++++|..+.. .+|+.+++....- | +..+.+++||.+|.+.+. . ..+...++|+|+
T Consensus 106 v~lv~gLP~~~~~~~~~k~~~~~~l~~~~~v~~~~~g~~~~i~I~~v~v~pe~~ga~~~~~---~---~~~~~~v~vvDi 179 (329)
T 4apw_A 106 VQLVLACPLSVLRNAKAKEEYRDYIKGNGEITVKVDDKEYSFEITDITIKAEGSGVLFLEQ---E---NFKNKNVAVIDF 179 (329)
T ss_dssp EEEEEEECGGGTTSSTTTTHHHHHHSSCEEECSSTTCCCEEEEEEEEEEEEHHHHHHHHSC---C---CCTTCEEEEEEE
T ss_pred EEEEEcCCHHHhcchhHHHHHHHHhcCCceEEEEECCEEEEEEEeEEEEEeccHHHHhhcc---h---hhccCCEEEEEe
Confidence 4789999987764 3677787776521 1 134778999998887652 1 135689999999
Q ss_pred CCcceEEEEEEEeCCeEEEEEEeCCCCcchHHHHHHHHHHHHHHHHHhhcccccCCHHHHHHHHHHHHHhhhhcCCCCee
Q 005222 202 GHSDTQVSIVSFEAGHMKVLSHAFDSSLGGRDFDDVLFGYFAAKFKEQYKINVYSNVRACIRLRAACEKLKKVLSANAEA 281 (708)
Q Consensus 202 Gggt~dvsv~~~~~~~~~v~~~~~~~~lGG~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~~e~~K~~Ls~~~~~ 281 (708)
||||||++++. .+.+ +....+...+||.++++.|.+++.. .+|+..+.. ..++++|+. . ..
T Consensus 180 GggTtd~~v~~--~g~~-~~~~~~~~~~G~~~~~~~i~~~l~~---~~~g~~i~~---------~~~e~i~~~--g--~~ 240 (329)
T 4apw_A 180 GGLNMGFSLYR--NCVV-NPSERFIEEHGVKDLIIRVGDALTD---LNNGNLITN---------EQAESALNN--G--YM 240 (329)
T ss_dssp CSSCEEEEEEE--TTEE-CGGGCEEESCCHHHHHHHHHTSSSS---CSSCSCTTS---------BTTTTCSSS--C--SS
T ss_pred CCCcEEEEEEE--CCEE-eeccccchhhHHHHHHHHHHHHHHh---hccCCCCCH---------HHHHHHHhc--C--Cc
Confidence 99999999987 4444 3222335679999999999987754 035554443 334455543 1 11
Q ss_pred eEEeccccCCcceEEEeCHHHHHHHhhhhhHHHHHHHHHHHHHcCCCCCCccEEEEecCCCChHHHHHHHHhHhCCCCCC
Q 005222 282 PLNIECLMDEKDVRGFIKREEFEELASGLTEKIAIPCRKALADAGLHVDKIHSVEIVGSGSRIPAITRLLTSLFGREPRR 361 (708)
Q Consensus 282 ~i~i~~l~~~~d~~~~itr~~fe~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~srip~v~~~l~~~fg~~v~~ 361 (708)
. .+.+. ..+..+.+++.++++++.|...+++. +.+++.++.|+|+||++.+ +.+.|++.|+.++..
T Consensus 241 ~-------~g~~~-~~~~~~~i~~~~~e~~~~I~~~i~~~----~~~~~~~~~IvltGGGA~l--~~~~l~~~~~~~v~v 306 (329)
T 4apw_A 241 K-------KGGEI-DTESSTVIKKVKEKFLKDAIKLIEKR----GFKLDQLDSLIFIGGTTQK--LKEQISKTYPNNSII 306 (329)
T ss_dssp C-------EECTT-CCSTTHHHHHHHHHHHHHHHHHHHHH----TCCTTSCSEEEEESTTHHH--HHHHHHHHSTTCEEC
T ss_pred c-------cCCcc-hhHHHHHHHHHHHHHHHHHHHHHHHc----CCCHHHccEEEEECChHHH--HHHHHHHHcCCCCEe
Confidence 0 01122 13456778888888888877777665 3556668999999999998 569999999977888
Q ss_pred CCCchhhHhchHHHHHHH
Q 005222 362 SLNASECVARGCALQCAM 379 (708)
Q Consensus 362 ~~n~~eava~GAa~~a~~ 379 (708)
..||..|+|+|+..++..
T Consensus 307 ~~~P~~a~a~G~~~~~~~ 324 (329)
T 4apw_A 307 TNNSQWTTCEGLYKVAVA 324 (329)
T ss_dssp CSSGGGHHHHHHHHHHHH
T ss_pred cCCChhhHHHHHHHHHhh
Confidence 889999999999988764
No 30
>3dwl_A Actin-related protein 3; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.47 E-value=1.1e-13 Score=150.00 Aligned_cols=223 Identities=11% Similarity=0.039 Sum_probs=142.1
Q ss_pred ceEEEEecCCCCHHHHHHHHHHH-HHcCCcceeeecchHHHHHhccccccCCCCCCceEEEEEEeCCcceEEEEEEEeCC
Q 005222 138 VDCVIGVPSYFTDLQRREYLNAA-SIAGLRPLRLIHDCTATALGYGIYKTDFANGGKSYIAFVDIGHSDTQVSIVSFEAG 216 (708)
Q Consensus 138 ~~~VitVPa~~~~~qr~~l~~Aa-~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~Gggt~dvsv~~~~~~ 216 (708)
..+++|.|+..+...|+.+.+.+ +.+|++.+.++.+|.+|+++.+.... .......-||+|+|+|+|+++.+. .|
T Consensus 124 ~pvlltep~~~~~~~re~~~ei~FE~~~~p~v~l~~~~vla~~a~G~~~~--~~~~~~tglVVDiG~g~T~v~PV~--~G 199 (427)
T 3dwl_A 124 HYFLLTEPPLNPPENRENTAEIMFESFNCAGLYIAVQAVLALAASWTSSK--VTDRSLTGTVVDSGDGVTHIIPVA--EG 199 (427)
T ss_dssp CEEEEEECTTCCHHHHHHHHHHHTTTTCCSEEEEEEHHHHHHHGGGGSTT--TCSCCCCEEEEEESSSCEEEEEEE--TT
T ss_pred CcEEEEcCCCCCHHHHHHHHHHHHHhccCceeeecchHHHHHHhcCCccc--ccCCCceEEEEECCCCceEEEEEE--CC
Confidence 47999999999999999999987 78999999999999999988774321 001135689999999999999873 33
Q ss_pred eEEEEEEeCCCCcchHHHHHHHHHHHHHHHHHhhcccccCCHHHHHHHHHHHHHhhhhcCCCCee-----------eEEe
Q 005222 217 HMKVLSHAFDSSLGGRDFDDVLFGYFAAKFKEQYKINVYSNVRACIRLRAACEKLKKVLSANAEA-----------PLNI 285 (708)
Q Consensus 217 ~~~v~~~~~~~~lGG~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~~e~~K~~Ls~~~~~-----------~i~i 285 (708)
.. +........+||+++|+.|.+++..+... ... ...++.+|+.+...... ...+
T Consensus 200 ~~-l~~~~~rl~~gG~~lt~~L~~lL~~~~~~----~~~---------~~~~~~IKe~~cyv~~d~~~e~~~~~~~~~~~ 265 (427)
T 3dwl_A 200 YV-IGSSIKTMPLAGRDVTYFVQSLLRDRNEP----DSS---------LKTAERIKEECCYVCPDIVKEFSRFDREPDRY 265 (427)
T ss_dssp EE-CGGGCEEESCCHHHHHHHHHHTTC---------------------CHHHHHHHHHHCCCCSCHHHHHHHTTC-----
T ss_pred EE-ehhhheeccccHHHHHHHHHHHHHHcCCC----chh---------HHHHHHHHHhcCcccCCHHHHHHHhhcCcccc
Confidence 22 11111124799999999999887654221 111 14556666665422100 0000
Q ss_pred c--cc--cCCcceEEEeCHHHH---HHHhhhh------hHHHHHHHHHHHHHcCC--CCCCccEEEEecCCCChHHHHHH
Q 005222 286 E--CL--MDEKDVRGFIKREEF---EELASGL------TEKIAIPCRKALADAGL--HVDKIHSVEIVGSGSRIPAITRL 350 (708)
Q Consensus 286 ~--~l--~~~~d~~~~itr~~f---e~~~~~~------~~~i~~~i~~~l~~~~~--~~~~i~~ViLvGG~srip~v~~~ 350 (708)
. .+ .++....+.|..+.| |-+++|- ...|.+.+.+.|.++.. ...-...|+|+||+|.+|.+.++
T Consensus 266 ~~~~l~~~~g~~~~i~ig~erf~~pE~LF~P~~~g~~~~~gI~~~i~~sI~~c~~dlr~~L~~nIvLtGG~sl~~G~~~R 345 (427)
T 3dwl_A 266 LKYASESITGHSTTIDVGFERFLAPEIFFNPEIASSDFLTPLPELVDNVVQSSPIDVRKGLYKNIVLSGGSTLFKNFGNR 345 (427)
T ss_dssp CCBCC---------CBCCTHHHHSGGGGTCGGGTCSSCCSCHHHHHHHHHHTSCHHHHHHHHHCEEEESGGGCSTTTTHH
T ss_pred ceeEeeCCCCCeeEEEEChHhhhChhhccCchhcCCccCCCccHHHHHHHHhCCHHHHHHHhCCEEEEccCcCCCChHHH
Confidence 0 01 133334567777776 3444442 24577888888876532 11123579999999999999998
Q ss_pred HHhHhC----------------------CCCCCCCCchhhHhchHHHHHH
Q 005222 351 LTSLFG----------------------REPRRSLNASECVARGCALQCA 378 (708)
Q Consensus 351 l~~~fg----------------------~~v~~~~n~~eava~GAa~~a~ 378 (708)
|.+.+. .++..+.++..++=.|++++|.
T Consensus 346 L~~El~~l~~~~~~~~~~~~~~~p~~~~vkv~~~~~r~~s~WiGGSilas 395 (427)
T 3dwl_A 346 LQRDLKRIVDERIHRSEMLSGAKSGGVDVNVISHKRQRNAVWFGGSLLAQ 395 (427)
T ss_dssp HHHHHHHHHTTC-------------CCCCCEECCTTCTTHHHHHHHHHHH
T ss_pred HHHHHHHhhhhhccccccccccCCCceeEEEecCCccccceecCceeecc
Confidence 887651 1123345667889999999986
No 31
>3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae}
Probab=99.45 E-value=4.5e-13 Score=146.59 Aligned_cols=178 Identities=15% Similarity=0.125 Sum_probs=116.3
Q ss_pred eEEEEEccccceEEEEEeCCceEEEeCCCCCccceEEEEEcCC----cEEEcHHHHHhHhcCCcchHHHHHHhhCCCCCC
Q 005222 2 SVVGFDIGNENCVIATVKHRGVDVLLNEESNRETPSIVCFGEK----QRFIGAAGYASAMMHPKSTVSQVKRLIGRRYGD 77 (708)
Q Consensus 2 ~vvGID~GTt~s~va~~~~~~~~ii~~~~g~r~~Ps~v~~~~~----~~~~G~~A~~~~~~~~~~~~~~~k~llg~~~~~ 77 (708)
..|+||+||.++++++..++.+.. ..||+|+.... ..+||++|.... + + .
T Consensus 24 ~~iVID~GS~~~kaG~ag~~~P~~--------v~PSvVg~~~~~~~~~~~vG~e~~~~~---r-----------~----~ 77 (498)
T 3qb0_A 24 SAVVIDPGSYTTNIGYSGSDFPQS--------ILPSVYGKYTADEGNKKIFSEQSIGIP---R-----------K----D 77 (498)
T ss_dssp SCEEEECCSSEEEEEETTCSSCSE--------EEESEEEEESSCSSCCEECCTTGGGSC---C-----------T----T
T ss_pred CeEEEECCCcEEEEEECCCCCeee--------ecCceeEEeccCCCccEEEecHHHhcC---c-----------C----c
Confidence 468999999999999865443322 35999988532 357787642110 0 0 0
Q ss_pred hHHHhhhccCCceeeecCCCCeEEEEEecCceeeecHHHHHHHHHHHHHHHHHhhcCC--Ccc-eEEEEecCCCCHHHHH
Q 005222 78 PVVQKDLMVLPFESCESPDGGISIKLKYLGETHTFCPVQVMGMLFSHLKDVAEKNLEM--PVV-DCVIGVPSYFTDLQRR 154 (708)
Q Consensus 78 ~~v~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~el~a~~L~~l~~~a~~~~~~--~~~-~~VitVPa~~~~~qr~ 154 (708)
..-..|++ +|.+ ..+ +.+..+++|+... .++. .-. .++||.|+......|+
T Consensus 78 -----l~l~~Pi~-----~GvI----------~dw---d~~E~iw~~~f~~---~L~v~p~~~~pvlltep~~n~~~~Re 131 (498)
T 3qb0_A 78 -----YELKPIIE-----NGLV----------IDW---DTAQEQWQWALQN---ELYLNSNSGIPALLTEPVWNSTENRK 131 (498)
T ss_dssp -----EEEEESEE-----TTEE----------SCH---HHHHHHHHHHHHH---TSCCSCCTTCCEEEEECTTCCHHHHH
T ss_pred -----eEEeccCc-----CCEE----------ccH---HHHHHHHHHHHHh---hhCCCcccCCceEEEeCCCCcHHHHH
Confidence 00011211 3322 112 2334455555432 2332 123 6999999999999999
Q ss_pred HHHHHH-HHcCCcceeeecchHHHHHhccccccCCCCCCceEEEEEEeCCcceEEEEEEEeCCeEEEEEEeCCCCcchHH
Q 005222 155 EYLNAA-SIAGLRPLRLIHDCTATALGYGIYKTDFANGGKSYIAFVDIGHSDTQVSIVSFEAGHMKVLSHAFDSSLGGRD 233 (708)
Q Consensus 155 ~l~~Aa-~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~Gggt~dvsv~~~~~~~~~v~~~~~~~~lGG~~ 233 (708)
.+.+.+ +.+|++.+.++.+|.||+++++. .+-||+|+|+|+|+++.+. .|.. +........+||++
T Consensus 132 ~~~eilFE~f~vpav~l~~~~vlalya~G~----------~tglVVDiG~g~T~vvPI~--~G~~-l~~ai~rl~vgG~~ 198 (498)
T 3qb0_A 132 KSLEVLLEGMQFEACYLAPTSTCVSFAAGR----------PNCLVVDIGHDTCSVSPIV--DGMT-LSKSTRRNFIAGKF 198 (498)
T ss_dssp HHHHHHHTTSCCSEEEEEEHHHHHHHHHTC----------SSEEEEEECSSCEEEEEEE--TTEE-CGGGCEEESCSHHH
T ss_pred HHHHHHHhhcCCCeEeecchHHHHHHHcCC----------CeEEEEEcCCCcEEEEEEe--CCEE-ccccceeccccHHH
Confidence 999975 78999999999999999987764 1249999999999999875 3422 11111135799999
Q ss_pred HHHHHHHHHHH
Q 005222 234 FDDVLFGYFAA 244 (708)
Q Consensus 234 id~~l~~~l~~ 244 (708)
+|+.|.++|..
T Consensus 199 lt~~L~~lL~~ 209 (498)
T 3qb0_A 199 INHLIKKALEP 209 (498)
T ss_dssp HHHHHHHHTTT
T ss_pred HHHHHHHHHHh
Confidence 99999998863
No 32
>3lof_A Heat shock 70 kDa protein 1; structural genomics, HSPA1B, HSP70, PSI-2, prote structure initiative; 2.40A {Homo sapiens} PDB: 2lmg_A
Probab=99.28 E-value=1.9e-11 Score=106.81 Aligned_cols=82 Identities=22% Similarity=0.406 Sum_probs=76.3
Q ss_pred hHHHHHHHhhhHHHHHHHHHHHhhh-hhccCCCHHHHHHHHHHHHHHHHHhhcCCCCcCHHHHHHHHHHHHHhHHHHHHH
Q 005222 593 TMEQTKDKKNALESYVYEMRNKLFS-TYRSFASDQEREGISRSLQETEEWLYDDGDDETANTYASKLEDLKKLVDPIENR 671 (708)
Q Consensus 593 ~~~~~~~a~N~LEs~iy~~r~~l~~-~~~~~~~~~e~~~l~~~l~e~~~WL~~~~~~a~~~~~~~kl~~L~~~~~pi~~R 671 (708)
++|++.++||.||+|||.+|..|.+ .+..+++++++++|...|+++++||+.+ .+++.++|+.|+++|++++.||..|
T Consensus 3 ~~re~ieakN~lEs~iy~~e~~l~e~~~~~kl~~eek~~i~~~i~e~~~wL~~~-~~a~~e~i~~k~~eL~~~~~~i~~k 81 (113)
T 3lof_A 3 AAAERVSAKNALESYAFNMKSAVEDEGLKGKISEADKKKVLDKCQEVISWLDAN-TLAEKDEFEHKRKELEQVCNPIISG 81 (113)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCGGGBTTBCHHHHHHHHHHHHHHHHHHHHC-TTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcchhhhccCCHHHHHHHHHHHHHHHHHHHcC-CcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 5789999999999999999999975 4889999999999999999999999986 5789999999999999999999999
Q ss_pred HHhh
Q 005222 672 YKDG 675 (708)
Q Consensus 672 ~~e~ 675 (708)
++..
T Consensus 82 ~y~~ 85 (113)
T 3lof_A 82 LYQG 85 (113)
T ss_dssp HHHC
T ss_pred HHHh
Confidence 9864
No 33
>4fo0_A Actin-related protein 8; chromatin remodeling, nucleosomes, NU gene regulation; HET: ATP; 2.60A {Homo sapiens}
Probab=99.22 E-value=3.8e-10 Score=128.74 Aligned_cols=108 Identities=21% Similarity=0.393 Sum_probs=80.2
Q ss_pred HHHHHH-HhhcCCCcc-----eEEEEecCCCCHHHHHHHHHHH-HHcCCcceeeecchHHHHHhccccccCCCCCCceEE
Q 005222 124 HLKDVA-EKNLEMPVV-----DCVIGVPSYFTDLQRREYLNAA-SIAGLRPLRLIHDCTATALGYGIYKTDFANGGKSYI 196 (708)
Q Consensus 124 ~l~~~a-~~~~~~~~~-----~~VitVPa~~~~~qr~~l~~Aa-~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~v 196 (708)
.|++++ ...++.... .+++|.|..++...|+.|.+.+ +..|++.+.++.++.+|++++|. .+-
T Consensus 179 ~iw~~~~~~~L~i~~~d~~~~pvlltep~~~~~~~re~~~eilFE~f~~pa~~~~~~~vla~ya~G~----------~tg 248 (593)
T 4fo0_A 179 VIWSHAIQKYLEIPLKDLKYYRCILLIPDIYNKQHVKELVNMILMKMGFSGIVVHQESVCATYGSGL----------SST 248 (593)
T ss_dssp HHHHHHHHHTSCCCGGGGGGCEEEEEECSSCCHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHHTC----------SEE
T ss_pred HHHHHHHHHhcCCCchhccCCcEEEEeCCCCCHHHHHHHHHHHHHhcCCCeEEeechHHHHHHHCCC----------Cce
Confidence 344443 345665443 4999999999999999888764 66799999999999999987763 367
Q ss_pred EEEEeCCcceEEEEEEEeCCeEEEEEEeCCCCcchHHHHHHHHHHHHH
Q 005222 197 AFVDIGHSDTQVSIVSFEAGHMKVLSHAFDSSLGGRDFDDVLFGYFAA 244 (708)
Q Consensus 197 lv~D~Gggt~dvsv~~~~~~~~~v~~~~~~~~lGG~~id~~l~~~l~~ 244 (708)
+|||+|++.|.|+-|. +|.. +........+||++++..|.++|..
T Consensus 249 lVVDiG~~~T~v~PV~--dG~~-l~~~~~rl~~GG~~lt~~L~~lL~~ 293 (593)
T 4fo0_A 249 CIVDVGDQKTSVCCVE--DGVS-HRNTRLCLAYGGSDVSRCFYWLMQR 293 (593)
T ss_dssp EEEEECSSCEEEEEEE--SSCB-CGGGCEEESCCHHHHHHHHHHHHHH
T ss_pred EEEEeCCCceeeeeeE--CCEE-ehhheEEecccHHHHHHHHHHHHHh
Confidence 9999999999988764 3321 1111113479999999999988864
No 34
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=99.18 E-value=1.8e-11 Score=130.42 Aligned_cols=196 Identities=18% Similarity=0.173 Sum_probs=129.1
Q ss_pred HHHHHHHHHHHHc-CC--cceeeecchHHHHHhccccccCCCCCCceEEEEEEeCCcceEEEEEEEeCCeEEEEEEeCCC
Q 005222 151 LQRREYLNAASIA-GL--RPLRLIHDCTATALGYGIYKTDFANGGKSYIAFVDIGHSDTQVSIVSFEAGHMKVLSHAFDS 227 (708)
Q Consensus 151 ~qr~~l~~Aa~~A-Gl--~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~Gggt~dvsv~~~~~~~~~v~~~~~~~ 227 (708)
.+-+.+.+|.+.+ |+ .+-. -||.||+++..... +.+..++++||||||||++++. ++.+... . ..
T Consensus 368 ~~m~NI~~cVer~~gL~veV~g--~ep~AAglaaLTeD-----E~eLGvaiIDmGGGTTd~sVf~--~G~lv~a-~--~i 435 (610)
T 2d0o_A 368 LQMAMIAREIEQKLNIDVQIGG--AEAEAAILGALTTP-----GTTRPLAILDLGAGSTDASIIN--PKGDIIA-T--HL 435 (610)
T ss_dssp CCHHHHHHHHHHHHCCEEEEEE--EHHHHHHHHHTTST-----TCCSSEEEEEECSSEEEEEEEC--TTCCEEE-E--EE
T ss_pred HHHHHHHHHHHhccCCcceecc--ccHHHhhhhhcCCC-----CCcCCeEEEEeCCCcceEEEEc--CCcEEEE-E--Ee
Confidence 4567889999999 99 6666 89999998876532 5677899999999999999975 4433222 2 35
Q ss_pred CcchHHHHHHHHHHHHHHHHHhhcccccCCHHHHHHHHHHHHHhhhhcCC-C---------CeeeEEe--ccccCC---c
Q 005222 228 SLGGRDFDDVLFGYFAAKFKEQYKINVYSNVRACIRLRAACEKLKKVLSA-N---------AEAPLNI--ECLMDE---K 292 (708)
Q Consensus 228 ~lGG~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~~e~~K~~Ls~-~---------~~~~i~i--~~l~~~---~ 292 (708)
..||++++..|..-|. .++ +..||++|. ... . ....+.+ +.+... .
T Consensus 436 p~gG~~VT~DIA~~Lg----------t~d--------~~~AErIK~-YG~A~ve~lf~~~dede~Iev~~~~lgp~~~~R 496 (610)
T 2d0o_A 436 AGAGDMVTMIIARELG----------LED--------RYLAEEIKK-YPLAKVESLFHLRHEDGSVQFFSTPLPPAVFAR 496 (610)
T ss_dssp ECSHHHHHHHHHHHHT----------CCC--------HHHHHHHHH-SCEEEECSSSEEEETTSCEEECSSCCCGGGTTC
T ss_pred ccchHHHHHHHHHHhC----------CCC--------HHHHHHhcc-cCceeecccccccCCCCeEEEecCCCCcceeee
Confidence 7999999999986542 221 167889998 421 1 1123444 222100 0
Q ss_pred ------ceEEEeCHHH--HHHHhhhhhHHHHHH--HHHHHHHcCC-----CCCCccEEEEecCCCChHHHHHHHHhHhCC
Q 005222 293 ------DVRGFIKREE--FEELASGLTEKIAIP--CRKALADAGL-----HVDKIHSVEIVGSGSRIPAITRLLTSLFGR 357 (708)
Q Consensus 293 ------d~~~~itr~~--fe~~~~~~~~~i~~~--i~~~l~~~~~-----~~~~i~~ViLvGG~srip~v~~~l~~~fg~ 357 (708)
+.-..| +.+ +|+ ++-+-+++.+. +..+|+..+. +..+|..|+|+||+|.++.+.++..+.|+.
T Consensus 497 v~~~~~~~L~~I-~pR~~vEE-lelVR~~ak~~vfv~n~Lralg~~~~~g~~r~i~~VVLTGGsSql~GI~ElA~~iL~~ 574 (610)
T 2d0o_A 497 VCVVKADELVPL-PGDLALEK-VRAIRRSAKERVFVTNALRALRQVSPTGNIRDIPFVVLVGGSSLDFEVPQLVTDALAH 574 (610)
T ss_dssp EEEECSSCEEEC-CTTCCHHH-HHHHHHHHHHHHHHHHHHHHHHHHSSSSCGGGCCEEEEESGGGGCSSHHHHHHHHTTT
T ss_pred eecccccceeee-CCCcchHH-HHHHHHHHhhhhhhHHHHHhcCCccCCCcccccCCEEEeCchhhcccHHHHHHHHhCc
Confidence 111234 444 555 44444443332 2223555322 345779999999999999999999999976
Q ss_pred -CC-------CCCCCchhhHhchHHHHHHH
Q 005222 358 -EP-------RRSLNASECVARGCALQCAM 379 (708)
Q Consensus 358 -~v-------~~~~n~~eava~GAa~~a~~ 379 (708)
++ ...-+|..|+|.|.+++.+.
T Consensus 575 y~VRiGrP~~~gv~gP~fAtAvGLlly~~~ 604 (610)
T 2d0o_A 575 YRLVAGRGNIRGSEGPRNAVATGLILSWHK 604 (610)
T ss_dssp SSCEEEECCGGGTSTTSCHHHHHHHHHHHH
T ss_pred CCeEEecCCccccCCCcHHHHHHHHHHHhh
Confidence 54 22348999999999987653
No 35
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=99.13 E-value=4.1e-11 Score=128.29 Aligned_cols=194 Identities=18% Similarity=0.127 Sum_probs=126.7
Q ss_pred HHHHHHHHHHHc-CC--cceeeecchHHHHHhccccccCCCCCCceEEEEEEeCCcceEEEEEEEeCCeEEEEEEeCCCC
Q 005222 152 QRREYLNAASIA-GL--RPLRLIHDCTATALGYGIYKTDFANGGKSYIAFVDIGHSDTQVSIVSFEAGHMKVLSHAFDSS 228 (708)
Q Consensus 152 qr~~l~~Aa~~A-Gl--~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~Gggt~dvsv~~~~~~~~~v~~~~~~~~ 228 (708)
+-+.+.+|.+.+ |+ .+-. -||.||+++..... +.+..++++||||||||++++. ++.+.. +. ...
T Consensus 371 ~m~NI~~~Ver~~gL~veV~g--~ep~AA~laaLTed-----E~elGvaiIDmGgGTTd~sVf~--~g~lv~-a~--~ip 438 (607)
T 1nbw_A 371 QMQVIARELSARLQTEVVVGG--VEANMAIAGALTTP-----GCAAPLAILDLGAGSTDAAIVN--AEGQIT-AV--HLA 438 (607)
T ss_dssp CSCCHHHHHHHHHTSEEEECS--CHHHHHHHHHTTST-----TCCSSEEEEEECSSEEEEEEEC--SSSCEE-EE--EEE
T ss_pred HHHHHHHHHHhccCCcceecc--ccHHHhhhhhcCCC-----CCcCCeEEEEeCCCcceEEEEc--CCcEEE-EE--Eec
Confidence 345688888888 99 5555 89999998876532 5677899999999999999975 433322 12 357
Q ss_pred cchHHHHHHHHHHHHHHHHHhhcccccCCHHHHHHHHHHHHHhhhhcCC-C---------CeeeEEe--ccccCC---c-
Q 005222 229 LGGRDFDDVLFGYFAAKFKEQYKINVYSNVRACIRLRAACEKLKKVLSA-N---------AEAPLNI--ECLMDE---K- 292 (708)
Q Consensus 229 lGG~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~~e~~K~~Ls~-~---------~~~~i~i--~~l~~~---~- 292 (708)
.||++++..|..-|. .++ +..||++|. ... . ....+.+ +.+... .
T Consensus 439 ~gG~~VT~DIA~~Lg----------~~d--------~~~AErIK~-YG~A~~e~lf~~~dede~Iev~~~~lgp~~~~R~ 499 (607)
T 1nbw_A 439 GAGNMVSLLIKTELG----------LED--------LSLAEAIKK-YPLAKVESLFSIRHENGAVEFFREALSPAVFAKV 499 (607)
T ss_dssp CCHHHHHHHHHHHHT----------CSC--------HHHHHHHHH-SCEEEECSSSEEEETTSCEEECSSCCCGGGTTCE
T ss_pred cchHHHHHHHHHHhC----------CCC--------HHHHHHhcc-cCceeecccccccCCCCeEEEecCCCCcceeeee
Confidence 999999999986542 111 167899998 421 1 1113444 222100 0
Q ss_pred -----ceEEEeCHHH--HHHHhhhhhHHHHHH--HHHHHHHcCC-----CCCCccEEEEecCCCChHHHHHHHHhHhCC-
Q 005222 293 -----DVRGFIKREE--FEELASGLTEKIAIP--CRKALADAGL-----HVDKIHSVEIVGSGSRIPAITRLLTSLFGR- 357 (708)
Q Consensus 293 -----d~~~~itr~~--fe~~~~~~~~~i~~~--i~~~l~~~~~-----~~~~i~~ViLvGG~srip~v~~~l~~~fg~- 357 (708)
+.-..| +.+ +|+ ++-+-+++.+. +..+|+..+. +..+|..|+|+||+|.+|.+.++..+.|+.
T Consensus 500 ~~~~~~~L~~I-~~R~~vEE-lelVR~~ak~~vfv~n~Lralg~~~~~g~~r~i~~VVLTGGsSql~gI~elA~~iL~~~ 577 (607)
T 1nbw_A 500 VYIKEGELVPI-DNASPLEK-IRLVRRQAKEKVFVTNCLRALRQVSPGGSIRDIAFVVLVGGSSLDFEIPQLITEALSHY 577 (607)
T ss_dssp EEEETTEEEEE-CCSSCHHH-HHHHHHHHHHHHHHHHHHHHHSSSSTTCCSTTCCEEEEESGGGGSSSHHHHHHHHHHTT
T ss_pred ecccccceeee-CCCcchHH-HHHHHHHHhhhhhhHHHHHhcCCcccCCcccccCCEEEeCchhhcccHHHHHHHHhCcC
Confidence 111233 334 444 33333333332 3344777654 245679999999999999999999999975
Q ss_pred CC-------CCCCCchhhHhchHHHHHH
Q 005222 358 EP-------RRSLNASECVARGCALQCA 378 (708)
Q Consensus 358 ~v-------~~~~n~~eava~GAa~~a~ 378 (708)
++ ...-+|..|+|.|.+++.+
T Consensus 578 ~VRiGrP~~~g~~gP~fAtAvGLlly~~ 605 (607)
T 1nbw_A 578 GVVAGQGNIRGTEGPRNAVATGLLLAGQ 605 (607)
T ss_dssp TCEEEECCGGGTSCSCCHHHHHHHHHHH
T ss_pred CeEEecCCccccCCchHHHHHHHHHhhh
Confidence 43 2234899999999997653
No 36
>2p32_A Heat shock 70 kDa protein A; three-helix bundle, chaperone; 3.20A {Caenorhabditis elegans}
Probab=99.00 E-value=4.5e-10 Score=99.05 Aligned_cols=80 Identities=18% Similarity=0.368 Sum_probs=72.3
Q ss_pred HHHHHHHhhhHHHHHHHHHHHhhh-hhccCCCHHHHHHHHHHHHHHHHHhhcCCCCcCHHHHHHHHHHHHHhHHHHHHHH
Q 005222 594 MEQTKDKKNALESYVYEMRNKLFS-TYRSFASDQEREGISRSLQETEEWLYDDGDDETANTYASKLEDLKKLVDPIENRY 672 (708)
Q Consensus 594 ~~~~~~a~N~LEs~iy~~r~~l~~-~~~~~~~~~e~~~l~~~l~e~~~WL~~~~~~a~~~~~~~kl~~L~~~~~pi~~R~ 672 (708)
+|++.++||.||+|||.+|..|.+ .+...++++++++|...|+++++||+.+ .++++++|++++++|++++.||..|+
T Consensus 13 ~re~iEarN~aEsliy~~e~~L~e~~~~dkl~~eek~~I~~~i~el~~~L~~~-~~ad~e~ik~k~~eL~~~~~~i~~k~ 91 (120)
T 2p32_A 13 GLVPRGSHMGLESYAFNLKQTIEDEKLKDKISPEDKKKIEDKCDEILKWLDSN-QTAEKEEFEHQQKDLEGLANPIISKL 91 (120)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHTCTTTGGGSCHHHHHHHHHHHHHHHHHHHHH-TTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhchhhhccCCHHHHHHHHHHHHHHHHHHHcC-CcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 467889999999999999999975 3788999999999999999999999864 46889999999999999999999988
Q ss_pred Hh
Q 005222 673 KD 674 (708)
Q Consensus 673 ~e 674 (708)
+.
T Consensus 92 y~ 93 (120)
T 2p32_A 92 YQ 93 (120)
T ss_dssp CC
T ss_pred HH
Confidence 74
No 37
>1ud0_A HSC70, 70 kDa heat-shock-like protein; chaperone; 3.45A {Rattus norvegicus} SCOP: a.8.4.1
Probab=98.91 E-value=9.9e-10 Score=95.99 Aligned_cols=77 Identities=18% Similarity=0.397 Sum_probs=68.2
Q ss_pred HHHHhhhHHHHHHHHHHHhhh-hhccCCCHHHHHHHHHHHHHHHHHhhcCCCCcCHHHHHHHHHHHHHhHHHHHHHHHh
Q 005222 597 TKDKKNALESYVYEMRNKLFS-TYRSFASDQEREGISRSLQETEEWLYDDGDDETANTYASKLEDLKKLVDPIENRYKD 674 (708)
Q Consensus 597 ~~~a~N~LEs~iy~~r~~l~~-~~~~~~~~~e~~~l~~~l~e~~~WL~~~~~~a~~~~~~~kl~~L~~~~~pi~~R~~e 674 (708)
+.++||.||+|||.+|..|.+ ++...++++++++|...|.++++||+++ .+++.++|++++++|++++.||..|+++
T Consensus 2 l~EarN~aE~~iy~~e~~L~~~e~~~kl~~~ek~~i~~~i~~l~~~L~~~-~~ad~~~i~~~~~~L~~~~~~i~~~~~~ 79 (113)
T 1ud0_A 2 VPRGSHMLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEIISWLDKN-QTAEKEEFEHQQKELEKVCNPIITKLYQ 79 (113)
T ss_dssp --CCHHHHHHHHHHHHHHHTSGGGTTTSCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHTHHHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHHHHHHHHhcchhhhccCCHHHHHHHHHHHHHHHHHHHcC-CccCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 568999999999999999974 5888999999999999999999999743 3567899999999999999999998875
No 38
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=98.80 E-value=2.8e-07 Score=93.65 Aligned_cols=71 Identities=20% Similarity=0.174 Sum_probs=52.8
Q ss_pred HhhhhhHHHHHHHHHHHHHcCCCCCCccEEEEecCCCChHHHHHHHHhHhCCCCCCCCCchhhHhchHHHHHHHh
Q 005222 306 LASGLTEKIAIPCRKALADAGLHVDKIHSVEIVGSGSRIPAITRLLTSLFGREPRRSLNASECVARGCALQCAML 380 (708)
Q Consensus 306 ~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~srip~v~~~l~~~fg~~v~~~~n~~eava~GAa~~a~~~ 380 (708)
++..+++.+...+.+.++..+. .+.|+++||.++.|.+++.+.+.+|.++..+.+++.+.|+|||++|...
T Consensus 187 i~~av~e~Va~~i~~~~~~~~~----~~~i~~~GG~a~n~~~~~~~~~~lg~~v~~p~~~~~~~AlGAAl~A~~~ 257 (270)
T 1hux_A 187 IIAGIHRSVASRVIGLANRVGI----VKDVVMTGGVAQNYGVRGALEEGLGVEIKTSPLAQYNGALGAALYAYKK 257 (270)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCC----CSSEEEESGGGGCHHHHHHHHHHHCSCEECCGGGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCCC----CCeEEEeCccccCHHHHHHHHHHHCCCeEeCCCcchHhHHHHHHHHHHh
Confidence 3334444444444444443221 3679999999999999999999999998888888889999999999764
No 39
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=98.07 E-value=0.00028 Score=71.41 Aligned_cols=75 Identities=11% Similarity=0.043 Sum_probs=52.4
Q ss_pred eCHHHHH-HHhhhhhHHHHHHHHHHHHHcCCCCCCccEEEEecC-CCChHHHHHHHHhHh---CCCCCCCCCchhhHhch
Q 005222 298 IKREEFE-ELASGLTEKIAIPCRKALADAGLHVDKIHSVEIVGS-GSRIPAITRLLTSLF---GREPRRSLNASECVARG 372 (708)
Q Consensus 298 itr~~fe-~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG-~srip~v~~~l~~~f---g~~v~~~~n~~eava~G 372 (708)
.+++++- .++..+.+++..+.....+..+ ++.|+++|| .+..|.+++.+.+++ +.++..+.+|..+.|+|
T Consensus 207 ~~~eDIaasl~~sV~~~I~~la~~~a~~~~-----i~~Vvf~Gg~l~~n~~l~~~l~~~~~~~~~~~~~p~~~~~~gAlG 281 (287)
T 2ews_A 207 FTPSNKLAAVIGVVGEVVTTMAITVAREFK-----TENIVYIGSSFHNNALLRKVVEDYTVLRGCKPYYVENGAFSGAIG 281 (287)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----CCEEEEESGGGTTCHHHHHHHHHHHHHTTCEEEECTTGGGHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhCC-----CCeEEEeCCchhcCHHHHHHHHHHHhhCCceEEECCCccHHHHHH
Confidence 3455443 2333344444444333333433 456999999 899999999999985 57788889999999999
Q ss_pred HHHHH
Q 005222 373 CALQC 377 (708)
Q Consensus 373 Aa~~a 377 (708)
||+.+
T Consensus 282 AaL~~ 286 (287)
T 2ews_A 282 ALYLE 286 (287)
T ss_dssp HHHTC
T ss_pred HHHhC
Confidence 99864
No 40
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A*
Probab=97.94 E-value=3.1e-05 Score=85.68 Aligned_cols=123 Identities=19% Similarity=0.355 Sum_probs=88.4
Q ss_pred ceEEEEecCCCCHHHHHHHHHHH-HHcCCcceeeecchHHHHHhccccccCCCCCCceEEEEEEeCCcceEEEEEEEeCC
Q 005222 138 VDCVIGVPSYFTDLQRREYLNAA-SIAGLRPLRLIHDCTATALGYGIYKTDFANGGKSYIAFVDIGHSDTQVSIVSFEAG 216 (708)
Q Consensus 138 ~~~VitVPa~~~~~qr~~l~~Aa-~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~Gggt~dvsv~~~~~~ 216 (708)
..++||.|+.++...|+.|.+.+ +..|++.+.++.+|.||++++|. ...-||+|+|+|+|+++.+. .|
T Consensus 222 ~pVLLTEPplnp~~~REkm~EIlFE~fgvpavyl~~qavlAlyasGl---------~ttGLVVDiG~g~T~VvPV~--eG 290 (655)
T 4am6_A 222 YKVVLVIPDIFKKSHVETFIRVLLTELQFQAVAIIQESLATCYGAGI---------STSTCVVNIGAAETRIACVD--EG 290 (655)
T ss_dssp CEEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHSCC---------SSCEEEEEECSSCEEEEEEE--TT
T ss_pred CcEEEEeCCCCCHHHHHHHHHHHHhhcCCCeeeeccHHHHHHHhCCC---------CCceEEEcCCCceEEEEEEe--CC
Confidence 46999999999999999999887 56899999999999999987763 24679999999999999874 34
Q ss_pred eEEEEEEeCCCCcchHHHHHHHHHHHHHHHHHhhcc-cccCCHHHHHHHHHHHHHhhhhcCCC
Q 005222 217 HMKVLSHAFDSSLGGRDFDDVLFGYFAAKFKEQYKI-NVYSNVRACIRLRAACEKLKKVLSAN 278 (708)
Q Consensus 217 ~~~v~~~~~~~~lGG~~id~~l~~~l~~~~~~~~~~-~~~~~~~~~~rL~~~~e~~K~~Ls~~ 278 (708)
.. +........+||+++|..|.++|..+ .|.. +..-+... =+..++.+|+.++.-
T Consensus 291 ~v-l~~ai~rL~iGG~dLT~yL~kLL~~r---gypy~~~~f~t~~---e~eiVrdIKEk~CyV 346 (655)
T 4am6_A 291 TV-LEHSAITLDYGGDDITRLFALFLLQS---DFPLQDWKIDSKH---GWLLAERLKKNFTTF 346 (655)
T ss_dssp EE-CGGGCEEESCCHHHHHHHHHHHHHHT---TCSCCSCCTTSHH---HHHHHHHHHHHHCCC
T ss_pred EE-EhhheeeecchHHHHHHHHHHHHHHc---CCCccccCCCCcc---hHHHHHHHHHheEEE
Confidence 21 11111135799999999999988753 1100 01111111 125677888888655
No 41
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=96.82 E-value=0.085 Score=54.60 Aligned_cols=64 Identities=11% Similarity=0.002 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEEecCCCChHHHHHHHHhHh---CCCCCCCC---CchhhHhchHHHHHHHh
Q 005222 312 EKIAIPCRKALADAGLHVDKIHSVEIVGSGSRIPAITRLLTSLF---GREPRRSL---NASECVARGCALQCAML 380 (708)
Q Consensus 312 ~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~srip~v~~~l~~~f---g~~v~~~~---n~~eava~GAa~~a~~~ 380 (708)
+.+...+.++.+..+ ++.|+|+||.+....+++.|.+.+ |.++..+. -.|.+++.|+|.+....
T Consensus 230 ~~l~~~~~~~~~~~~-----~~~vvlsGGVa~N~~l~~~l~~~l~~~g~~v~~p~~~~~~D~G~~iG~a~~~~~~ 299 (330)
T 2ivn_A 230 AALVEVTERAVAHTE-----KDEVVLVGGVAANNRLREMLRIMTEDRGIKFFVPPYDLCRDNGAMIAYTGLRMYK 299 (330)
T ss_dssp HHHHHHHHHHHHHHC-----CSEEEEESGGGGCHHHHHHHHHHHHHHTCEEECCCHHHHSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhC-----CCeEEEEccHHHHHHHHHHHHHHHHHcCCEEEecCCCCCChhHHHHHHHHHHHHh
Confidence 334444444444433 567999999999999999999877 55555444 34778899988765443
No 42
>2i7n_A Pantothenate kinase 1; PANK, transferase; HET: ACO; 1.90A {Homo sapiens} SCOP: c.55.1.14 c.55.1.14 PDB: 3smp_A* 3sms_A* 2i7p_A* 3mk6_A*
Probab=96.81 E-value=0.02 Score=59.37 Aligned_cols=46 Identities=20% Similarity=0.055 Sum_probs=40.0
Q ss_pred ccEEEEecC-CCChHHHHHHHHhHhC------CCCCCCCCchhhHhchHHHHH
Q 005222 332 IHSVEIVGS-GSRIPAITRLLTSLFG------REPRRSLNASECVARGCALQC 377 (708)
Q Consensus 332 i~~ViLvGG-~srip~v~~~l~~~fg------~~v~~~~n~~eava~GAa~~a 377 (708)
++.|+++|| .+..|.+++.|+..++ .++..+.+|..+.|+|||+.+
T Consensus 306 i~~IvftGgfla~n~~~~~~L~~~l~~ws~g~~~~~~~~~~~y~GAlGAaL~~ 358 (360)
T 2i7n_A 306 IDRVVFVGNFLRINMVSMKLLAYAMDFWSKGQLKALFLEHEGYFGAVGALLEL 358 (360)
T ss_dssp CCCEEEESGGGCSSSHHHHHHHHHHHHHTTTSCCEEEETTTTCHHHHHHHHHH
T ss_pred CCeEEEeCcccccCHHHHHHHHHHHhhhhcCCeeEEEcCCccHHHHHHHHHHh
Confidence 345999999 9999999999999863 567778899999999999875
No 43
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A*
Probab=96.65 E-value=0.01 Score=61.05 Aligned_cols=78 Identities=9% Similarity=0.038 Sum_probs=50.6
Q ss_pred HHHHHHHHHHcCCcceeeecchHHHHHhccccccCCCCCCceEEEEEEeCCcceEEEEEEEeCCeEEEEEEeCCCCcchH
Q 005222 153 RREYLNAASIAGLRPLRLIHDCTATALGYGIYKTDFANGGKSYIAFVDIGHSDTQVSIVSFEAGHMKVLSHAFDSSLGGR 232 (708)
Q Consensus 153 r~~l~~Aa~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~Gggt~dvsv~~~~~~~~~v~~~~~~~~lGG~ 232 (708)
...+..+-+..|+++-.+-.|.+|.....+... .++ .....+|+|+|||+|.++++. ++.+ ... .+.++|+.
T Consensus 100 ~~fl~~v~~~~G~~i~vIsg~eEA~l~~~gv~~-~l~--~~~~~lvvDIGGGStEl~~~~--~~~~--~~~-~Sl~~G~v 171 (315)
T 1t6c_A 100 EEFLERVKREVGLVVEVITPEQEGRYAYLAVAY-SLK--PEGEVCVVDQGGGSTEYVFGK--GYKV--REV-ISLPIGIV 171 (315)
T ss_dssp HHHHHHHHHHTCCCEEECCHHHHHHHHHHHHHH-HTC--CCSEEEEEEEETTEEEEEEEE--TTEE--EEE-EEECCCHH
T ss_pred HHHHHHHHHHHCCCEEEcCHHHHHHHHHHHHHh-hcc--cCCCEEEEEeCCCcEEEEEEe--CCce--eeE-EEEeccHH
Confidence 344555555789986555556666544444432 222 245799999999999999875 4443 222 24789999
Q ss_pred HHHHHH
Q 005222 233 DFDDVL 238 (708)
Q Consensus 233 ~id~~l 238 (708)
.+.+.+
T Consensus 172 ~l~e~~ 177 (315)
T 1t6c_A 172 NLTETF 177 (315)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 888775
No 44
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=96.38 E-value=0.0044 Score=69.36 Aligned_cols=87 Identities=15% Similarity=0.166 Sum_probs=61.9
Q ss_pred EeCHHHHHHHhhhhhHHHHHHHHHHHHHcCCCCCCccEEEEecCCCChHHHHHHHHhHhCCCCCCCCCchhhHhchHHHH
Q 005222 297 FIKREEFEELASGLTEKIAIPCRKALADAGLHVDKIHSVEIVGSGSRIPAITRLLTSLFGREPRRSLNASECVARGCALQ 376 (708)
Q Consensus 297 ~itr~~fe~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~srip~v~~~l~~~fg~~v~~~~n~~eava~GAa~~ 376 (708)
.-+|.++-.++.-+++-+.-.++..++...-....++.|.++||+++.|.+.+++.+.||.+|..+ ...|+.|+|||++
T Consensus 408 ~~~~~~l~r~~rAvlEgia~~~r~~~e~l~~~g~~~~~i~~~GG~aks~~~~Qi~ADv~g~pV~~~-~~~e~~alGAA~l 486 (554)
T 3l0q_A 408 STTPEDMALRYLATIQALALGTRHIIETMNQNGYNIDTMMASGGGTKNPIFVQEHANATGCAMLLP-EESEAMLLGSAMM 486 (554)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCEEEEESGGGGCHHHHHHHHHHHCCEEEEE-SCSCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCccccCHHHHHHHHHhhCCeEEec-CCCcchHHHHHHH
Confidence 347888854444555555444444433221112357889999999999999999999999988665 4567999999999
Q ss_pred HHHhCCCc
Q 005222 377 CAMLSPAF 384 (708)
Q Consensus 377 a~~~~~~~ 384 (708)
|+.-.+.+
T Consensus 487 A~~a~G~~ 494 (554)
T 3l0q_A 487 GTVAAGVF 494 (554)
T ss_dssp HHHHTTSS
T ss_pred HHHHcCCc
Confidence 99766644
No 45
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=96.24 E-value=0.0066 Score=67.19 Aligned_cols=79 Identities=25% Similarity=0.310 Sum_probs=56.1
Q ss_pred CHHHHHHHhhh-hhHHHHHHHHHHHHHcCCCCCCccEEEEecCCCChHHHHHHHHhHhCCCCCCCCCchhhHhchHHHHH
Q 005222 299 KREEFEELASG-LTEKIAIPCRKALADAGLHVDKIHSVEIVGSGSRIPAITRLLTSLFGREPRRSLNASECVARGCALQC 377 (708)
Q Consensus 299 tr~~fe~~~~~-~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~srip~v~~~l~~~fg~~v~~~~n~~eava~GAa~~a 377 (708)
+|.++-+.+-+ +.-.+...+ +.|++.+. .++.|.++||+++.|.+.+++.+.||.+|... .+.|+.|+|||++|
T Consensus 395 ~~~~l~RAvlEgia~~~r~~l-~~l~~~g~---~~~~i~~~GGgaks~~~~Qi~ADvlg~pV~~~-~~~e~~alGAA~lA 469 (515)
T 3i8b_A 395 TRENLARAFVEGLLCSQRDCL-ELIRSLGA---SITRILLIGGGAKSEAIRTLAPSILGMDVTRP-ATDEYVAIGAARQA 469 (515)
T ss_dssp SHHHHHHHHHHHHHHHHHHHH-HHHHHTTC---CCCEEEEESGGGGCHHHHHHHHHHHTSCEEEE-CCCCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHH-HHHHHcCC---CCCEEEEECchhcCHHHHHHHHHHhCCceEec-CCcccHHHHHHHHH
Confidence 56665443332 222333333 34455554 47889999999999999999999999988654 45678999999999
Q ss_pred HHhCC
Q 005222 378 AMLSP 382 (708)
Q Consensus 378 ~~~~~ 382 (708)
+.-.+
T Consensus 470 ~~a~G 474 (515)
T 3i8b_A 470 AWVLS 474 (515)
T ss_dssp HHHHH
T ss_pred HHHcC
Confidence 86543
No 46
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=96.12 E-value=0.0054 Score=67.46 Aligned_cols=53 Identities=21% Similarity=0.273 Sum_probs=45.0
Q ss_pred CccEEEEecCCCChHHHHHHHHhHhCCCCCCCCCchhhHhchHHHHHHHhCCC
Q 005222 331 KIHSVEIVGSGSRIPAITRLLTSLFGREPRRSLNASECVARGCALQCAMLSPA 383 (708)
Q Consensus 331 ~i~~ViLvGG~srip~v~~~l~~~fg~~v~~~~n~~eava~GAa~~a~~~~~~ 383 (708)
.++.|.++||+++.|.+.+++.+.+|.++......+.+.|+|||+.|+.-.+.
T Consensus 386 ~~~~i~~~GG~a~s~~~~Qi~Adv~g~pV~~~~~~e~~~alGAA~lA~~~~g~ 438 (484)
T 2itm_A 386 KPQSVTLIGGGARSEYWRQMLADISGQQLDYRTGGDVGPALGAARLAQIAANP 438 (484)
T ss_dssp CCSCEEEESGGGCCHHHHHHHHHHHCCCEEEESCTTSCHHHHHHHHHHHHHCT
T ss_pred CcceEEEEeccccCHHHHHHHHHHhCCeEEeCCCCCcccHHHHHHHHHHHcCC
Confidence 46789999999999999999999999999777555556899999999875543
No 47
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=96.12 E-value=0.0073 Score=66.82 Aligned_cols=80 Identities=20% Similarity=0.177 Sum_probs=57.7
Q ss_pred CHHHHHHHhhhhhHHHHHHHHHHHHHcCCCCCCccEEEEecCCCChHHHHHHHHhHhCCCC-CCCCCchhhHhchHHHHH
Q 005222 299 KREEFEELASGLTEKIAIPCRKALADAGLHVDKIHSVEIVGSGSRIPAITRLLTSLFGREP-RRSLNASECVARGCALQC 377 (708)
Q Consensus 299 tr~~fe~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~srip~v~~~l~~~fg~~v-~~~~n~~eava~GAa~~a 377 (708)
+|.+|-+ -+++-+.-.++..++...- .. ++.|.++||+++.|.+.+++.+.+|.+| .. ..+.|+.|+|||+.|
T Consensus 375 ~~~~l~R---AvlEgia~~~~~~~~~l~~-g~-~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~-~~~~e~~alGaA~lA 448 (511)
T 3hz6_A 375 TRAQILL---AVLEGAALSLRWCAELLGM-EK-VGLLKVVGGGARSEAWLRMIADNLNVSLLVK-PDAHLHPLRGLAALA 448 (511)
T ss_dssp CHHHHHH---HHHHHHHHHHHHHHHHHTG-GG-CCEEEEESGGGGCHHHHHHHHHHHTCEEEEC-CCGGGHHHHHHHHHH
T ss_pred CHHHHHH---HHHHHHHHHHHHHHHHHhc-CC-CCEEEEeCchhcCHHHHHHHHHHHCCeeEEe-cCCCCchHHHHHHHH
Confidence 5665543 3444444444444433322 23 7889999999999999999999999998 55 458899999999999
Q ss_pred HHhCCCc
Q 005222 378 AMLSPAF 384 (708)
Q Consensus 378 ~~~~~~~ 384 (708)
+.-.+.+
T Consensus 449 ~~a~G~~ 455 (511)
T 3hz6_A 449 AVELEWS 455 (511)
T ss_dssp HHHTTSC
T ss_pred HHHhCCc
Confidence 8776643
No 48
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=96.09 E-value=0.0075 Score=67.18 Aligned_cols=76 Identities=16% Similarity=0.109 Sum_probs=57.2
Q ss_pred HHhhhhhHHHHHHHHHHHHHcCCCCCCccEEEEecCCCChHHHHHHHHhHhCCCCCCCCCchhhHhchHHHHHHHhC
Q 005222 305 ELASGLTEKIAIPCRKALADAGLHVDKIHSVEIVGSGSRIPAITRLLTSLFGREPRRSLNASECVARGCALQCAMLS 381 (708)
Q Consensus 305 ~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~srip~v~~~l~~~fg~~v~~~~n~~eava~GAa~~a~~~~ 381 (708)
.++.-+++-+.-.++..++..+.....++.|.++||+++.|.+.+++.+.||.+|... .+.|+.|+|||+.|+.-.
T Consensus 408 ~l~RAvlEgia~~~r~~~~~l~~~g~~~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~-~~~e~~alGaA~lA~~a~ 483 (538)
T 4bc3_A 408 VEVRALIEGQFMAKRIHAEGLGYRVMSKTKILATGGASHNREILQVLADVFDAPVYVI-DTANSACVGSAYRAFHGL 483 (538)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCCCTTCCEEEEEGGGGCHHHHHHHHHHHTSCEEEC-CCTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhcCCCCCeEEEEcchhcCHHHHHHHHHHhCCceEec-CCCCchHHHHHHHHHHHh
Confidence 3444455555555555566554444467889999999999999999999999988654 567899999999998644
No 49
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=96.04 E-value=0.0089 Score=65.95 Aligned_cols=80 Identities=19% Similarity=0.240 Sum_probs=57.4
Q ss_pred CHHHHHHHhhhhhHHHHHHHHHHHHHcCCCCCCccEEEEecCCCChHHHHHHHHhHhCCCCCCCCCchhhHhchHHHHHH
Q 005222 299 KREEFEELASGLTEKIAIPCRKALADAGLHVDKIHSVEIVGSGSRIPAITRLLTSLFGREPRRSLNASECVARGCALQCA 378 (708)
Q Consensus 299 tr~~fe~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~srip~v~~~l~~~fg~~v~~~~n~~eava~GAa~~a~ 378 (708)
+|.++- .-+++.+.-.++..++...... .++.|.++||+++.|.+.+++.+.+|.++..+ .+.|+.|+|||+.|+
T Consensus 365 ~~~~l~---rAvlEgia~~~~~~l~~l~~~~-~~~~i~~~GG~a~s~~~~Qi~Adv~g~pV~~~-~~~e~~alGaA~lA~ 439 (497)
T 2zf5_O 365 GREHLA---RATLEAIAYLTRDVVDEMEKLV-QIKELRVDGGATANDFLMQFQADILNRKVIRP-VVKETTALGAAYLAG 439 (497)
T ss_dssp CHHHHH---HHHHHHHHHHHHHHHHHHTTTS-CCCCEEEESGGGGCHHHHHHHHHHHTSCEEEE-SCSCHHHHHHHHHHH
T ss_pred CHHHHH---HHHHHHHHHHHHHHHHHHHhcC-CcceEEEeCccccCHHHHHHHHhhcCCeEEEc-CCCcchHHHHHHHHH
Confidence 455543 3444444444555555433222 57889999999999999999999999988655 445699999999998
Q ss_pred HhCCC
Q 005222 379 MLSPA 383 (708)
Q Consensus 379 ~~~~~ 383 (708)
.-.+.
T Consensus 440 ~~~g~ 444 (497)
T 2zf5_O 440 LAVDY 444 (497)
T ss_dssp HHTTS
T ss_pred HHhCc
Confidence 76654
No 50
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=95.99 E-value=0.011 Score=65.35 Aligned_cols=81 Identities=15% Similarity=0.061 Sum_probs=57.6
Q ss_pred CHHHHHHHhhh-hhHHHHHHHHHHHHHcCCCCCCccEEEEecCCCChHHHHHHHHhHhCCCCCCCCCchhhHhchHHHHH
Q 005222 299 KREEFEELASG-LTEKIAIPCRKALADAGLHVDKIHSVEIVGSGSRIPAITRLLTSLFGREPRRSLNASECVARGCALQC 377 (708)
Q Consensus 299 tr~~fe~~~~~-~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~srip~v~~~l~~~fg~~v~~~~n~~eava~GAa~~a 377 (708)
+|.+|-+.+-+ +.-.+...+ +.|++.+. .++.|.++||+++.|.+.+++.+.||.+|..... .|+.|+|||++|
T Consensus 371 ~~~~l~rAvlEgia~~~~~~~-~~l~~~g~---~~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~~~-~e~~alGaA~lA 445 (508)
T 3ifr_A 371 TRGHLWRALLEAVALAFRHHV-AVLDDIGH---APQRFFASDGGTRSRVWMGIMADVLQRPVQLLAN-PLGSAVGAAWVA 445 (508)
T ss_dssp CHHHHHHHHHHHHHHHHHHHH-HHHHHHTC---CCCEEEEESGGGGCHHHHHHHHHHHTSCEEEEEC-CSTHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHH-HHHHhcCC---CCCEEEEeCCcccCHHHHHHHHHHhCCeEEecCC-CCchHHHHHHHH
Confidence 56666444333 323333333 34455554 4788999999999999999999999999876643 568899999999
Q ss_pred HHhCCCc
Q 005222 378 AMLSPAF 384 (708)
Q Consensus 378 ~~~~~~~ 384 (708)
+.-.+.+
T Consensus 446 ~~a~G~~ 452 (508)
T 3ifr_A 446 AIGGGDD 452 (508)
T ss_dssp HHHTCSS
T ss_pred HHHhCCC
Confidence 8766543
No 51
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=95.90 E-value=0.012 Score=65.01 Aligned_cols=53 Identities=8% Similarity=-0.006 Sum_probs=46.0
Q ss_pred CccEEEEecCCCChHHHHHHHHhHhCCCCCCCCCchhhHhchHHHHHHHhCCCc
Q 005222 331 KIHSVEIVGSGSRIPAITRLLTSLFGREPRRSLNASECVARGCALQCAMLSPAF 384 (708)
Q Consensus 331 ~i~~ViLvGG~srip~v~~~l~~~fg~~v~~~~n~~eava~GAa~~a~~~~~~~ 384 (708)
.++.|.++||+++.|.+.+++.+.||.+|... .+.|+.|+|||+.|+.-.+.+
T Consensus 393 ~~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~-~~~e~~alGaA~lA~~a~G~~ 445 (504)
T 3ll3_A 393 KPVAINATGGFLKSDFVRQLCANIFNVPIVTM-KEQQSGTLAAMFLARQALGLN 445 (504)
T ss_dssp CCSEEEEESGGGCSHHHHHHHHHHHTSCEEEE-SCSCHHHHHHHHHHHHHTTSC
T ss_pred CCCEEEEeCchhcCHHHHHHHHHhhCCeEEec-CCCCchhHHHHHHHHHHcCcc
Confidence 57899999999999999999999999998664 466799999999998766543
No 52
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=95.88 E-value=0.01 Score=65.94 Aligned_cols=83 Identities=13% Similarity=0.244 Sum_probs=58.8
Q ss_pred eCHHHHHHHhh-hhhHHHHHHHHHHHHHcCCCCCCccEEEEecCCCChHHHHHHHHhHhCCCCCCCCCchhhHhchHHHH
Q 005222 298 IKREEFEELAS-GLTEKIAIPCRKALADAGLHVDKIHSVEIVGSGSRIPAITRLLTSLFGREPRRSLNASECVARGCALQ 376 (708)
Q Consensus 298 itr~~fe~~~~-~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~srip~v~~~l~~~fg~~v~~~~n~~eava~GAa~~ 376 (708)
-+|.++-+.+- .+.-.+...++.+-+..|. .++.|.++||+++.|.+.+++.+.||.+|.++ ...|+.|+|||+.
T Consensus 371 ~~~~~i~RAvlEgia~~~r~~le~l~~~~g~---~~~~i~v~GGgaks~~~~Qi~ADvlg~pV~~~-~~~E~~alGAA~l 446 (526)
T 3ezw_A 371 VNANHIIRATLESIAYQTRDVLEAMQADSGI---RLHALRVDGGAVANNFLMQFQSDILGTRVERP-EVREVTALGAAYL 446 (526)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC---CCSEEEEESGGGGCHHHHHHHHHHHTSEEEEE-SCCCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CCCEEEEECchhhCHHHHHHHHHHHCCEEEeC-CCCchHHHHHHHH
Confidence 35666544333 2333333333333334565 47889999999999999999999999988665 4568899999999
Q ss_pred HHHhCCCc
Q 005222 377 CAMLSPAF 384 (708)
Q Consensus 377 a~~~~~~~ 384 (708)
|+.-.+.+
T Consensus 447 A~~a~G~~ 454 (526)
T 3ezw_A 447 AGLAVGFW 454 (526)
T ss_dssp HHHHTTSS
T ss_pred HHHHhCCC
Confidence 99877654
No 53
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=95.88 E-value=0.013 Score=64.75 Aligned_cols=81 Identities=16% Similarity=0.263 Sum_probs=57.5
Q ss_pred CHHHHHHHhh-hhhHHHHHHHHHHHHH-cCCCCCCccEEEEecCCCChHHHHHHHHhHhCCCCCCCCCchhhHhchHHHH
Q 005222 299 KREEFEELAS-GLTEKIAIPCRKALAD-AGLHVDKIHSVEIVGSGSRIPAITRLLTSLFGREPRRSLNASECVARGCALQ 376 (708)
Q Consensus 299 tr~~fe~~~~-~~~~~i~~~i~~~l~~-~~~~~~~i~~ViLvGG~srip~v~~~l~~~fg~~v~~~~n~~eava~GAa~~ 376 (708)
+|.+|-+.+- .+.-.+...++ .|++ .+. .++.|.++||+++.+.+.+++.+.||.+|... .+.|+.|+|||++
T Consensus 374 ~~~~l~RAvlEgia~~~~~~~~-~l~~~~g~---~~~~i~~~GG~aks~~~~Qi~Adv~g~pV~~~-~~~e~~alGaA~l 448 (501)
T 3g25_A 374 EKEHFIRATLESLCYQTRDVME-AMSKDSGI---DVQSLRVDGGAVKNNFIMQFQADIVNTSVERP-EIQETTALGAAFL 448 (501)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHH-HHHHHSSC---CCSEEEEESGGGGCHHHHHHHHHHHTSEEEEE-SCCCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHH-HHHHhcCC---CCcEEEEecchhcCHHHHHHHHHHhCCceEec-CCCcchHHHHHHH
Confidence 5666554332 33333333333 3333 454 47889999999999999999999999988554 4678999999999
Q ss_pred HHHhCCCc
Q 005222 377 CAMLSPAF 384 (708)
Q Consensus 377 a~~~~~~~ 384 (708)
|+.-.+.+
T Consensus 449 a~~a~G~~ 456 (501)
T 3g25_A 449 AGLAVGFW 456 (501)
T ss_dssp HHHHTTSS
T ss_pred HHHHhCcc
Confidence 99776654
No 54
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=95.87 E-value=0.46 Score=48.32 Aligned_cols=44 Identities=18% Similarity=0.216 Sum_probs=28.6
Q ss_pred cCCcceeeecchHHHHHhccccccCCCCCCceEEEEEEeCCcceEEEEE
Q 005222 163 AGLRPLRLIHDCTATALGYGIYKTDFANGGKSYIAFVDIGHSDTQVSIV 211 (708)
Q Consensus 163 AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~Gggt~dvsv~ 211 (708)
.|++ +.+.|+..|+|++-...... ....+++++-+|.| .-.+++
T Consensus 98 ~~~p-v~v~NDa~aaal~E~~~g~~---~~~~~~~~l~~GtG-iG~gii 141 (302)
T 3vov_A 98 TGRP-VFLENDANAAALAEHHLGAA---QGEESSLYLTVSTG-IGGGVV 141 (302)
T ss_dssp HSSC-EEEEEHHHHHHHHHHHHSTT---TTCSCEEEEEESSS-EEEEEE
T ss_pred hCCC-EEEEechHHHHHHHHHhCCC---CCCCCEEEEEECCc-eeEEEE
Confidence 4665 67999999999875433211 23456788888877 444554
No 55
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=95.82 E-value=0.015 Score=64.31 Aligned_cols=81 Identities=12% Similarity=0.229 Sum_probs=57.8
Q ss_pred CHHHHHHHhh-hhhHHHHHHHHHHHHH-cCCCCCCccEEEEecCCCChHHHHHHHHhHhCCCCCCCCCchhhHhchHHHH
Q 005222 299 KREEFEELAS-GLTEKIAIPCRKALAD-AGLHVDKIHSVEIVGSGSRIPAITRLLTSLFGREPRRSLNASECVARGCALQ 376 (708)
Q Consensus 299 tr~~fe~~~~-~~~~~i~~~i~~~l~~-~~~~~~~i~~ViLvGG~srip~v~~~l~~~fg~~v~~~~n~~eava~GAa~~ 376 (708)
+|.+|-+.+- .+.-.+...++ .|++ .+. .++.|.++||+++.+.+.+++.+.+|.+|... .+.|+.|+|||+.
T Consensus 373 ~~~~l~RAvlEgia~~~r~~~~-~l~~~~g~---~~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~-~~~e~~alGaA~l 447 (506)
T 3h3n_X 373 TKEDFVRATLQAVAYQSKDVID-TMKKDSGI---DIPLLKVDGGAAKNDLLMQFQADILDIDVQRA-ANLETTALGAAYL 447 (506)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHH-HHHHHHCS---CCCEEEEESGGGGCHHHHHHHHHHHTSEEEEC-SSSCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHH-HHHHhcCC---CCCEEEEecccccCHHHHHHHHHHhCCeEEec-CCCcchhHHHHHH
Confidence 5666654333 33333333333 3333 454 46889999999999999999999999988654 5678999999999
Q ss_pred HHHhCCCc
Q 005222 377 CAMLSPAF 384 (708)
Q Consensus 377 a~~~~~~~ 384 (708)
|+.-.+.+
T Consensus 448 A~~a~G~~ 455 (506)
T 3h3n_X 448 AGLAVGFW 455 (506)
T ss_dssp HHHHTTSS
T ss_pred HHHHhCcc
Confidence 99766654
No 56
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=95.78 E-value=0.49 Score=48.54 Aligned_cols=45 Identities=20% Similarity=0.302 Sum_probs=30.3
Q ss_pred cCCcceeeecchHHHHHhccccccCCCCCCceEEEEEEeCCcceEEEEEE
Q 005222 163 AGLRPLRLIHDCTATALGYGIYKTDFANGGKSYIAFVDIGHSDTQVSIVS 212 (708)
Q Consensus 163 AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~Gggt~dvsv~~ 212 (708)
.|++ +.+.|+..|+|++-...... ....+++++-+|.| .-.+++.
T Consensus 96 ~~~p-v~v~NDa~aaal~E~~~g~~---~~~~~~~~l~~GtG-iG~gii~ 140 (321)
T 3vgl_A 96 VGLP-VVVENDANAAAWGEYRFGAG---QGHDDVICITLGTG-LGGGIII 140 (321)
T ss_dssp HCSC-EEEEEHHHHHHHHHHHHSTT---TTCSSEEEEEESSS-EEEEEEE
T ss_pred hCCC-EEEEehhhhHHHHHHHhCCC---CCCCCEEEEEeCcc-eEEEEEE
Confidence 3776 78999999999875433211 23467888888887 5556553
No 57
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=95.60 E-value=0.046 Score=56.16 Aligned_cols=79 Identities=11% Similarity=0.046 Sum_probs=47.9
Q ss_pred HHHHHHHHHHcCCcceeeecchHHHHHhccccccCCCCCCceEEEEEEeCCcceEEEEEEEeCCeEEEEEEeCCCCcchH
Q 005222 153 RREYLNAASIAGLRPLRLIHDCTATALGYGIYKTDFANGGKSYIAFVDIGHSDTQVSIVSFEAGHMKVLSHAFDSSLGGR 232 (708)
Q Consensus 153 r~~l~~Aa~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~Gggt~dvsv~~~~~~~~~v~~~~~~~~lGG~ 232 (708)
...+..+-+..|+++-.+=.|-+|.....+... .++ ......+|+|+|||+|.++++. ++.+. ... ..++|.-
T Consensus 92 ~~fl~~i~~~tG~~i~vIsG~eEA~l~~~gv~~-~~~-~~~~~~lviDIGGGStEl~~~~--~~~~~--~~~-Sl~lG~v 164 (315)
T 3mdq_A 92 QVLIDRIKKEVNIDVEVIDGAREAELIFRGVQQ-AVP-MEDHISLAMDIGGGSVEFIIGN--KNEIL--WKQ-SFEIGGQ 164 (315)
T ss_dssp HHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHH-HSC-CTTCCEEEEEECSSCEEEEEEC--SSCEE--EEE-EESCCHH
T ss_pred HHHHHHHHHHHCCCeEEeCHHHHHHHHHHHHHh-cCC-CCCCCEEEEEeCCCceEEEEEE--CCeEe--eeE-EEechhh
Confidence 344555556679986444445555443334322 222 1235799999999999999975 44332 222 4689988
Q ss_pred HHHHHH
Q 005222 233 DFDDVL 238 (708)
Q Consensus 233 ~id~~l 238 (708)
.+.+.+
T Consensus 165 rl~e~f 170 (315)
T 3mdq_A 165 RLIDRF 170 (315)
T ss_dssp HHHHHS
T ss_pred HHHHHh
Confidence 887654
No 58
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=95.60 E-value=0.0099 Score=66.74 Aligned_cols=79 Identities=15% Similarity=0.174 Sum_probs=55.9
Q ss_pred CHHHHHHHhhh-hhHHHHHHHHHHHHHcCCCCCCccEEEEecCCC-ChHHHHHHHHhHhCCCCCCCCCchhhHhchHHHH
Q 005222 299 KREEFEELASG-LTEKIAIPCRKALADAGLHVDKIHSVEIVGSGS-RIPAITRLLTSLFGREPRRSLNASECVARGCALQ 376 (708)
Q Consensus 299 tr~~fe~~~~~-~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s-rip~v~~~l~~~fg~~v~~~~n~~eava~GAa~~ 376 (708)
+|.+|-+.+-+ +.-.+... -+.|++.+. .++.|.++||++ +.+.+.+++.+.||.+|... .+.|+.|+|||+.
T Consensus 410 t~~~l~RAvlEgia~~~r~~-~~~l~~~g~---~~~~i~~~GGga~ks~~~~Qi~ADv~g~pV~~~-~~~e~~alGaA~l 484 (572)
T 3jvp_A 410 KPEEIYRALLEATAFGTRAI-VDAFHGRGV---EVHELYACGGLPQKNHLLMQIFADVTNREIKVA-ASKQTPALGAAMF 484 (572)
T ss_dssp CHHHHHHHHHHHHHHHHHHH-HHHHHTTTC---CEEEEEEESSHHHHCHHHHHHHHHHHTSCEEEB-CCSSHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHH-HHHHHHcCC---CcCEEEEEcCchhhCHHHHHHHHHHHCCeeEec-CCCccHHHHHHHH
Confidence 56665443332 22222222 234444443 578999999999 99999999999999988654 4678999999999
Q ss_pred HHHhCC
Q 005222 377 CAMLSP 382 (708)
Q Consensus 377 a~~~~~ 382 (708)
|+.-.+
T Consensus 485 A~~a~G 490 (572)
T 3jvp_A 485 ASVAAG 490 (572)
T ss_dssp HHHHHC
T ss_pred HHHhcC
Confidence 987554
No 59
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=95.56 E-value=0.017 Score=63.93 Aligned_cols=80 Identities=13% Similarity=0.226 Sum_probs=56.3
Q ss_pred CHHHHHHHhh-hhhHHHHHHHHHHHHH-cCCCCCCccEEEEecCCCChHHHHHHHHhHhCCCCCCCCCchhhHhchHHHH
Q 005222 299 KREEFEELAS-GLTEKIAIPCRKALAD-AGLHVDKIHSVEIVGSGSRIPAITRLLTSLFGREPRRSLNASECVARGCALQ 376 (708)
Q Consensus 299 tr~~fe~~~~-~~~~~i~~~i~~~l~~-~~~~~~~i~~ViLvGG~srip~v~~~l~~~fg~~v~~~~n~~eava~GAa~~ 376 (708)
+|.++-+.+- .+.-.+...++ .|++ .+. .++.|.++||+++.+.+.+++.+.+|.+|... .+.|+.|+|||+.
T Consensus 371 ~~~~l~RAvlEgia~~~r~~~~-~l~~~~g~---~~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~-~~~e~~alGaA~l 445 (510)
T 2p3r_A 371 NANHIIRATLESIAYQTRDVLE-AMQADSGI---RLHALRVDGGAVANNFLMQFQSDILGTRVERP-EVREVTALGAAYL 445 (510)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHH-HHHHHHCC---CCSEEEEESGGGGCHHHHHHHHHHHTSEEEEE-SCCCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHH-HHHHhcCC---CccEEEEeCchhcCHHHHHHHHHHhCCceEec-CCCCcHHHHHHHH
Confidence 5666544333 23333333333 3333 354 47889999999999999999999999988654 4667999999999
Q ss_pred HHHhCCC
Q 005222 377 CAMLSPA 383 (708)
Q Consensus 377 a~~~~~~ 383 (708)
|+.-.+.
T Consensus 446 A~~a~G~ 452 (510)
T 2p3r_A 446 AGLAVGF 452 (510)
T ss_dssp HHHHHTS
T ss_pred HHHHhCc
Confidence 9876554
No 60
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=95.56 E-value=2.6 Score=43.45 Aligned_cols=46 Identities=7% Similarity=-0.018 Sum_probs=34.3
Q ss_pred CcceEEEEecCCCCHHHHHHHHHHHHHc-C--CcceeeecchHHHHHhc
Q 005222 136 PVVDCVIGVPSYFTDLQRREYLNAASIA-G--LRPLRLIHDCTATALGY 181 (708)
Q Consensus 136 ~~~~~VitVPa~~~~~qr~~l~~Aa~~A-G--l~~~~li~Ep~Aaal~y 181 (708)
.+..+.|++|...+......+.+..+.. | .-.+.+.|+..|||+++
T Consensus 70 ~i~gigi~~pG~vd~~~~~~l~~~l~~~~~~~~~pv~v~NDa~aaa~a~ 118 (347)
T 2ch5_A 70 PLRSLGLSLSGGDQEDAGRILIEELRDRFPYLSESYLITTDAAGSIATA 118 (347)
T ss_dssp CBSEEEEEETTTTCHHHHHHHHHHHHHHCTTSBSCEEEEEHHHHHHHHH
T ss_pred ceeEEEEeccCCCchHHHHHHHHHHHHhcCCCCceEEEECcHHHHHHhh
Confidence 5778999999999877666666665543 4 13578999999999873
No 61
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=95.51 E-value=0.016 Score=64.31 Aligned_cols=53 Identities=15% Similarity=0.075 Sum_probs=44.4
Q ss_pred CccEEEEecCCCChHHHHHHHHhHhCCCCCCCCCchhhHhchHHHHHHHhCCCc
Q 005222 331 KIHSVEIVGSGSRIPAITRLLTSLFGREPRRSLNASECVARGCALQCAMLSPAF 384 (708)
Q Consensus 331 ~i~~ViLvGG~srip~v~~~l~~~fg~~v~~~~n~~eava~GAa~~a~~~~~~~ 384 (708)
.++.|.++||+++.|.+.+++.+.+|.+|..+ .+.|+.|+|||++|+.-.+.+
T Consensus 425 ~~~~i~~~GGgaks~~~~Qi~ADvlg~pV~~~-~~~e~~alGAA~lA~~a~G~~ 477 (520)
T 4e1j_A 425 NDTVLRVDGGMVASDWTMQRLSDLLDAPVDRP-VILETTALGVAWLAGSRAGVW 477 (520)
T ss_dssp --CCEEEESGGGGCHHHHHHHHHHHTSCEEEE-SCCCHHHHHHHHHHHHHHTSS
T ss_pred CcceEEEeCccccCHHHHHHHHHHhCCeEEec-CCCccHHHHHHHHHHHHcCCc
Confidence 47789999999999999999999999998654 457799999999998765543
No 62
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=95.47 E-value=2.4 Score=42.63 Aligned_cols=48 Identities=13% Similarity=0.083 Sum_probs=36.3
Q ss_pred CccEEEEecCCCChHHHHHHHHhHhC-CCCCCCCCchhhHhchHHHHHHH
Q 005222 331 KIHSVEIVGSGSRIPAITRLLTSLFG-REPRRSLNASECVARGCALQCAM 379 (708)
Q Consensus 331 ~i~~ViLvGG~srip~v~~~l~~~fg-~~v~~~~n~~eava~GAa~~a~~ 379 (708)
+.+.|+|.||.+..+.+.+.+++.+. .++..+. .+.+.++||++++..
T Consensus 239 ~p~~IvlgGgv~~~~~~~~~l~~~~~~~~i~~~~-~~~~~~~GAa~la~~ 287 (299)
T 2e2o_A 239 GTNKVYLKGGMFRSNIYHKFFTLYLEKEGIISDL-GKRSPEIGAVILAYK 287 (299)
T ss_dssp TCSEEEEESGGGGSHHHHHHHHHHHHHTTCEEEC-CSCCHHHHHHHHHHH
T ss_pred CCCEEEEECCccCcHHHHHHHHHHCCCCeEeccC-CCCChHHHHHHHHHH
Confidence 45679999998776888888888774 4555555 667899999988754
No 63
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=95.37 E-value=1 Score=46.21 Aligned_cols=47 Identities=17% Similarity=0.143 Sum_probs=31.6
Q ss_pred CccEEEEecCCCChHHHHHHHHhHhCC---------CCCCCCCchhhHhchHHHHH
Q 005222 331 KIHSVEIVGSGSRIPAITRLLTSLFGR---------EPRRSLNASECVARGCALQC 377 (708)
Q Consensus 331 ~i~~ViLvGG~srip~v~~~l~~~fg~---------~v~~~~n~~eava~GAa~~a 377 (708)
+++.|+|-||.+..+.+.+.|++.+.. ++....-.+.+.++|||.++
T Consensus 269 ~p~~IvlgGgi~~~~~l~~~l~~~l~~~~~~~~~~~~i~~s~lg~~a~~~GAa~l~ 324 (327)
T 4db3_A 269 DPHVVALGGGLSNFELIYEEMPKRVPKYLLSVAKCPKIIKAKHGDSGGVRGAAFLN 324 (327)
T ss_dssp CCSEEEEESGGGGCTHHHHHHHHHGGGGSCTTCCCCEEEECSCGGGHHHHHHHHTT
T ss_pred CCCEEEEeCcccchHHHHHHHHHHHHHHhccccCCCEEEECCCCCcHHHHHHHHHH
Confidence 356799999988877777777766531 12222345678999998764
No 64
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=95.32 E-value=0.021 Score=62.88 Aligned_cols=51 Identities=16% Similarity=0.214 Sum_probs=43.8
Q ss_pred CccEEEEecCCCChHHHHHHHHhHhCCCCCCCCCchhhHhchHHHHHHHhCC
Q 005222 331 KIHSVEIVGSGSRIPAITRLLTSLFGREPRRSLNASECVARGCALQCAMLSP 382 (708)
Q Consensus 331 ~i~~ViLvGG~srip~v~~~l~~~fg~~v~~~~n~~eava~GAa~~a~~~~~ 382 (708)
.++.|.++||+++.+.+.+++.+.+|.++... .+.|+.|+|||+.|+.-.+
T Consensus 398 ~~~~i~~~GG~a~n~~~~q~~Adv~g~pV~~~-~~~e~~alGaA~la~~a~G 448 (495)
T 2dpn_A 398 RLKVLKADGGMAQNRLFLKIQADLLGVPVAVP-EVTETTALGAALMAGVGAG 448 (495)
T ss_dssp CCCCEEEESGGGGCHHHHHHHHHHHTSCEEEE-SCSCHHHHHHHHHHHHHHT
T ss_pred CCcEEEEecccccCHHHHHHHHHHhCCeeEec-CCcccHHHHHHHHHHhhcC
Confidence 46779999999999999999999999988655 4566999999999986544
No 65
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=95.31 E-value=0.028 Score=62.07 Aligned_cols=81 Identities=14% Similarity=0.158 Sum_probs=57.2
Q ss_pred CHHHHHHH-hhhhhHHHHHHHHHHHHHcCCCCCCccEEEEecCCCChHHHHHHHHhHhCCCCCCCCCchhhHhchHHHHH
Q 005222 299 KREEFEEL-ASGLTEKIAIPCRKALADAGLHVDKIHSVEIVGSGSRIPAITRLLTSLFGREPRRSLNASECVARGCALQC 377 (708)
Q Consensus 299 tr~~fe~~-~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~srip~v~~~l~~~fg~~v~~~~n~~eava~GAa~~a 377 (708)
+|.++-+. ++.+.-.+...++.+-+..+. .++.|.++||+++.+.+.+++.+.+|.++... .+.|+.|+|||++|
T Consensus 373 ~~~~l~rAvlEgia~~~~~~~~~l~~~~g~---~~~~i~~~GG~a~s~~~~Qi~Adv~g~pV~~~-~~~e~~alGaA~lA 448 (504)
T 2d4w_A 373 NRNHIARAALEATAFQSREVVDAMNADSGV---DLTELRVDGGMVANELLMQFQADQLGVDVVRP-KVAETTALGAAYAA 448 (504)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHSC---CCCEEEEESGGGGCHHHHHHHHHHHTSCEEEE-SCSCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CcceEEEeCCcccCHHHHHHHHHHhCCeEEeC-CCCcchHHHHHHHH
Confidence 56665543 333333444444433233454 36789999999999999999999999988655 45679999999999
Q ss_pred HHhCCC
Q 005222 378 AMLSPA 383 (708)
Q Consensus 378 ~~~~~~ 383 (708)
+.-.+.
T Consensus 449 ~~~~G~ 454 (504)
T 2d4w_A 449 GIAVGF 454 (504)
T ss_dssp HHHHTS
T ss_pred HhhcCc
Confidence 876543
No 66
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=95.16 E-value=0.034 Score=61.30 Aligned_cols=81 Identities=12% Similarity=0.197 Sum_probs=56.3
Q ss_pred CHHHHHHH-hhhhhHHHHHHHHHHHHHcCCCCCCc-cEEEEecCCCChHHHHHHHHhHhCCCCCCCCCchhhHhchHHHH
Q 005222 299 KREEFEEL-ASGLTEKIAIPCRKALADAGLHVDKI-HSVEIVGSGSRIPAITRLLTSLFGREPRRSLNASECVARGCALQ 376 (708)
Q Consensus 299 tr~~fe~~-~~~~~~~i~~~i~~~l~~~~~~~~~i-~~ViLvGG~srip~v~~~l~~~fg~~v~~~~n~~eava~GAa~~ 376 (708)
+|.++-.. ++.+.-.+...++.+-+..+. .+ +.|.++||+++.|.+.+++.+.+|.++... .+.|+.|+|||+.
T Consensus 376 ~~~~l~rAvlEgia~~~~~~~~~l~~~~g~---~~~~~i~~~GG~a~s~~~~Q~~Adv~g~pV~~~-~~~e~~alGaA~l 451 (503)
T 2w40_A 376 ERSHIVRALLEGIAFQLNEIVDSLTSDMGI---EMLHVLRCDGGMTKNKPFMQFNSDIINTKIEVS-KYKEVTSLGAAVL 451 (503)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHTC---SCCSCEEEESGGGGCHHHHHHHHHHHTSCEEEE-SCSCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CccceEEEeCccccCHHHHHHHHHHHCCeEEec-CCCcchHHHHHHH
Confidence 56555443 333333444444333222453 35 679999999999999999999999988654 4566999999999
Q ss_pred HHHhCCC
Q 005222 377 CAMLSPA 383 (708)
Q Consensus 377 a~~~~~~ 383 (708)
|+.-.+.
T Consensus 452 a~~~~G~ 458 (503)
T 2w40_A 452 AGLEVKI 458 (503)
T ss_dssp HHHHTTC
T ss_pred HHHHhCc
Confidence 9876654
No 67
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=95.15 E-value=0.64 Score=47.12 Aligned_cols=49 Identities=10% Similarity=0.028 Sum_probs=34.9
Q ss_pred CccEEEEecCCCChHHHHHHHHhHhCC------CCCCCCCchhhHhchHHHHHHH
Q 005222 331 KIHSVEIVGSGSRIPAITRLLTSLFGR------EPRRSLNASECVARGCALQCAM 379 (708)
Q Consensus 331 ~i~~ViLvGG~srip~v~~~l~~~fg~------~v~~~~n~~eava~GAa~~a~~ 379 (708)
+++.|+|-||.+..|.+.+.|++.+.. ++....-.+.+.++|||.++..
T Consensus 237 ~p~~IvlgGgi~~~~~~~~~l~~~l~~~~~~~~~i~~s~lg~~a~~~GAa~l~~~ 291 (297)
T 4htl_A 237 DPTHIFIGGGITSRPTFIAELKHHMESFGLRDTIIETATHKNQAGLLGAVYHFLQ 291 (297)
T ss_dssp CCSEEEEESGGGGSTTHHHHHHHHHTTTCCTTCEEEECSCTTTHHHHHHHHHHHH
T ss_pred CCCEEEEeCcccccHHHHHHHHHHHHHhccCCCeEEECCcCChHHHHhHHHHHHH
Confidence 357799999988877777777777642 2233334577999999988754
No 68
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=95.06 E-value=0.034 Score=61.14 Aligned_cols=78 Identities=19% Similarity=0.106 Sum_probs=53.5
Q ss_pred EeCHHHHHHHhh-hhhHHHHHHHHHHHHH-cCCCCCCccEEEEecCCCChHHHHHHHHhHhCCCCCCCCCchhhHhchHH
Q 005222 297 FIKREEFEELAS-GLTEKIAIPCRKALAD-AGLHVDKIHSVEIVGSGSRIPAITRLLTSLFGREPRRSLNASECVARGCA 374 (708)
Q Consensus 297 ~itr~~fe~~~~-~~~~~i~~~i~~~l~~-~~~~~~~i~~ViLvGG~srip~v~~~l~~~fg~~v~~~~n~~eava~GAa 374 (708)
.-+|.+|-+.+- .+.-.+...++ .|++ .|. .++.|.++||+++.+.+.+++.+.+|.++.... .|+.|+|||
T Consensus 361 ~~t~~~l~RAvlEgia~~~r~~~~-~l~~~~g~---~~~~i~~~GGgaks~~~~Qi~ADvlg~pV~~~~--~e~~alGaa 434 (489)
T 2uyt_A 361 PESDAELARCIFDSLALLYADVLH-ELAQLRGE---DFSQLHIVGGGCQNTLLNQLCADACGIRVIAGP--VEASTLGNI 434 (489)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHH-HHHHHHTC---CCSEEEEESGGGGCHHHHHHHHHHHTSEEEECC--TTHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHH-HHHHHhCC---CCCEEEEeCChhhhHHHHHHHHHHHCCeeecCC--ccHhHHHHH
Confidence 446766654333 33333333333 3333 444 467899999999999999999999999886543 689999996
Q ss_pred HHHHHh
Q 005222 375 LQCAML 380 (708)
Q Consensus 375 ~~a~~~ 380 (708)
+.|..-
T Consensus 435 ~~A~~a 440 (489)
T 2uyt_A 435 GIQLMT 440 (489)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 666543
No 69
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum}
Probab=94.49 E-value=1.4 Score=45.36 Aligned_cols=68 Identities=12% Similarity=0.022 Sum_probs=48.3
Q ss_pred hhHHHHHHHHHHHHHcCCCCCCccEEEEecCCCChHHHHHHHHhHh---CCCCCCCC---CchhhHhchHHHHHHHhCC
Q 005222 310 LTEKIAIPCRKALADAGLHVDKIHSVEIVGSGSRIPAITRLLTSLF---GREPRRSL---NASECVARGCALQCAMLSP 382 (708)
Q Consensus 310 ~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~srip~v~~~l~~~f---g~~v~~~~---n~~eava~GAa~~a~~~~~ 382 (708)
+.+.+...+.++++..+ ++.|+|+||.+....+++.|.+.+ |.++..+. -.|.+++.|+|.+.....+
T Consensus 233 l~~~l~~~~~~a~~~~g-----~~~vvlsGGVa~N~~L~~~L~~~l~~~g~~v~~p~~~~~~D~G~~iG~a~~~~~~~g 306 (334)
T 3eno_A 233 AFAMLVEVLERALYVSG-----KDEILMAGGVALNRRLRDMVTNMAREAGIRSYLTDREYCMDNGIMIAQAALLMYKSG 306 (334)
T ss_dssp HHHHHHHHHHHHHHHHT-----CSEEEEESSGGGCHHHHHHHHHHHHHHTSEEECCCTTTTSCCTHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHcC-----CCeEEEcCCHHHHHHHHHHHHHHHHHcCCEEEecCCCCCChHHHHHHHHHHHHHHcC
Confidence 34445555556666554 467999999999999999999887 55554433 3588999999876654443
No 70
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=94.42 E-value=0.8 Score=46.95 Aligned_cols=48 Identities=10% Similarity=-0.045 Sum_probs=32.2
Q ss_pred CccEEEEecCCCCh-HHHHHHHHhHhC----------CCCCCCCCchhhHhchHHHHHH
Q 005222 331 KIHSVEIVGSGSRI-PAITRLLTSLFG----------REPRRSLNASECVARGCALQCA 378 (708)
Q Consensus 331 ~i~~ViLvGG~sri-p~v~~~l~~~fg----------~~v~~~~n~~eava~GAa~~a~ 378 (708)
+++.|+|-||.++. +.+.+.|++.+. .++....-.+.+.++|||.++.
T Consensus 260 dP~~IvlgG~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~i~~s~l~~~a~~~GAa~l~~ 318 (321)
T 3r8e_A 260 DLNNILLGGGISGAFDYFVPNLKKAMLEHLPTYYTDDMYIGKATLENDAGLLGAAGLIM 318 (321)
T ss_dssp CCCEEEEESGGGGGHHHHHHHHHHHHHHHSCHHHHTTCEEEECSSGGGHHHHHHHHHHH
T ss_pred CCCEEEEeChhcccchHHHHHHHHHHHHhcccccCCCCEEEEcCCCCcHHHHHHHHHHH
Confidence 35789999998876 665555554441 2334444567899999998764
No 71
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=92.09 E-value=0.12 Score=56.58 Aligned_cols=71 Identities=17% Similarity=0.018 Sum_probs=51.9
Q ss_pred HHhhhhhHH--HHHHHHHHHHHcCCCCCCccEEEEecCCCChHHHHHHHHhH-hCCCCCCCCCchhhHhchHHHHHHHh
Q 005222 305 ELASGLTEK--IAIPCRKALADAGLHVDKIHSVEIVGSGSRIPAITRLLTSL-FGREPRRSLNASECVARGCALQCAML 380 (708)
Q Consensus 305 ~~~~~~~~~--i~~~i~~~l~~~~~~~~~i~~ViLvGG~srip~v~~~l~~~-fg~~v~~~~n~~eava~GAa~~a~~~ 380 (708)
.++.-+++- +.-.++..++... ..+.|.++||++++|.+.+++.+. ||.++.++. ..|+.|+|||++|+.-
T Consensus 363 ~l~RA~lE~~Gia~~~r~~l~~~~----~~~~i~~~GG~a~s~~w~Qi~ADv~~g~pV~~~~-~~e~~alGAA~lA~~a 436 (482)
T 3h6e_A 363 WFERRAAACLYAALVADTALDLIG----STGRILVEGRFAEADVFVRALASLRPDCAVYTAN-AHNDVSFGALRLIDPG 436 (482)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTT----CCSEEEEESGGGGCHHHHHHHHHHSTTSEEEEES-SCCCTTGGGHHHHCTT
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhc----CCCeEEEeCCcccCHHHHHHHhhhcCCCeEEEcC-CCchHHHHHHHHhCcc
Confidence 444444442 3444455555432 226899999999999999999999 999886664 4668899999999854
No 72
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A
Probab=91.26 E-value=5.9 Score=41.80 Aligned_cols=44 Identities=18% Similarity=0.363 Sum_probs=28.9
Q ss_pred cCCcceeeecchHHHHHhccccccCCCCCCceEEEEEEeCCcceEEEEE
Q 005222 163 AGLRPLRLIHDCTATALGYGIYKTDFANGGKSYIAFVDIGHSDTQVSIV 211 (708)
Q Consensus 163 AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~Gggt~dvsv~ 211 (708)
.|++ +.+.|+..|+|++....... .....++++-+|.| .-.+++
T Consensus 186 ~~~p-v~v~NDa~aaalaE~~~g~~---~~~~~~v~l~~GtG-iG~giv 229 (406)
T 1z6r_A 186 TGVP-VYIQHDISAWTMAEALFGAS---RGARDVIQVVIDHN-VGAGVI 229 (406)
T ss_dssp HSSC-EEEEEHHHHHHHHHHHHSTT---TTCSSEEEEEESSS-EEEEEE
T ss_pred HCCC-EEEechhHHHHHHHHHhcCC---CCCCcEEEEEECCc-EEEEEE
Confidence 3775 68899999999875433211 23456788888887 455555
No 73
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=91.08 E-value=19 Score=39.42 Aligned_cols=60 Identities=12% Similarity=0.050 Sum_probs=39.3
Q ss_pred hhHHHHHHHHHHHHHcCCCCCCccEEEEecCCCChHHHHHHHHhHh---CCCCCCCC---CchhhHhchHH
Q 005222 310 LTEKIAIPCRKALADAGLHVDKIHSVEIVGSGSRIPAITRLLTSLF---GREPRRSL---NASECVARGCA 374 (708)
Q Consensus 310 ~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~srip~v~~~l~~~f---g~~v~~~~---n~~eava~GAa 374 (708)
+++-+...+.++++..+ ++.|+|+||-+....+++.+.+.+ |.++..+. -.|.++..|.+
T Consensus 232 ~~~~l~~~~~~a~~~~~-----~~~~~~~GGVa~N~~l~~~l~~~~~~~~~~~~~p~~~~~~Dngamia~~ 297 (540)
T 3en9_A 232 AFSMLTEITERALAHTN-----KGEVMLVGGVAANNRLREMLKAMCEGQNVDFYVPPKEFCGDNGAMIAWL 297 (540)
T ss_dssp HHHHHHHHHHHHHHHHT-----CSEEEEESGGGGCHHHHHHHHHHHHHTTCEEECCCHHHHSSCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhC-----CCeEEEeCcHHhHHHHHHHHHHHHHhcCCEEEeCCCcCCCCCHHHHHHH
Confidence 33444455556666655 467999999999999999999877 44443332 13445555544
No 74
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705}
Probab=89.67 E-value=1 Score=46.57 Aligned_cols=80 Identities=20% Similarity=0.248 Sum_probs=48.0
Q ss_pred HHHHHHHHHcCCcceeeecchHHHHHhc-cccccCCCC-CCceEEEEEEeCCcceEEEEEEE--eC--CeEEEEEEeCCC
Q 005222 154 REYLNAASIAGLRPLRLIHDCTATALGY-GIYKTDFAN-GGKSYIAFVDIGHSDTQVSIVSF--EA--GHMKVLSHAFDS 227 (708)
Q Consensus 154 ~~l~~Aa~~AGl~~~~li~Ep~Aaal~y-~~~~~~~~~-~~~~~vlv~D~Gggt~dvsv~~~--~~--~~~~v~~~~~~~ 227 (708)
..+..+-+..|+++ .+|+...=|.+.| +... .++. .....++|+|+|||+|+++++.- .. +.+ .. ....
T Consensus 106 ~fl~~v~~~tGi~i-eVIsG~eEA~l~~~gv~~-~~~~~~~~~~~lviDIGGGStel~~~~~~~~~~~~~~--~~-~~Sl 180 (343)
T 3cer_A 106 EFEDEIERILGVRP-EVIPGTEEADLSFLGATS-VVNRDDLPAPYLVVDLGGGSTELVIGGDGVSAPTTQV--QG-AFSM 180 (343)
T ss_dssp HHHHHHHHHHSSCC-EECCHHHHHHHHHHHHHS-SCCTTTCCSSEEEEEECSSCEEEEECCCSSSSCTTSC--SE-EEEE
T ss_pred HHHHHHHHHHCCCE-EEeCHHHHHHHHHHHHHh-hCccccccCCEEEEEeCCCceEEEEeecCccCccccc--ce-eEEE
Confidence 44555556679985 5665555444444 3322 2221 12356999999999999998753 21 111 11 1246
Q ss_pred CcchHHHHHHH
Q 005222 228 SLGGRDFDDVL 238 (708)
Q Consensus 228 ~lGG~~id~~l 238 (708)
++|+..+.+.+
T Consensus 181 plG~v~lt~~~ 191 (343)
T 3cer_A 181 NIGSVRMTERH 191 (343)
T ss_dssp SCCHHHHHHHT
T ss_pred ehhHHHHHHHh
Confidence 89999988776
No 75
>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A*
Probab=87.52 E-value=1.2 Score=48.92 Aligned_cols=76 Identities=16% Similarity=0.150 Sum_probs=47.0
Q ss_pred HHHHHHHHHcCCcceeeecchHHHHHhc-cccccCCCCCCceEEEEEEeCCcceEEEEEEEeCCeEEEEEEeCCCCcchH
Q 005222 154 REYLNAASIAGLRPLRLIHDCTATALGY-GIYKTDFANGGKSYIAFVDIGHSDTQVSIVSFEAGHMKVLSHAFDSSLGGR 232 (708)
Q Consensus 154 ~~l~~Aa~~AGl~~~~li~Ep~Aaal~y-~~~~~~~~~~~~~~vlv~D~Gggt~dvsv~~~~~~~~~v~~~~~~~~lGG~ 232 (708)
..+.++-+..|+++ .+|+...=|.+.| |... .++. ....+|+|+|||+|.+++.. ++.+.. . ...++|..
T Consensus 100 ~fl~~i~~~tG~~i-~vIsG~eEA~l~~~gv~~-~~~~--~~~~lviDIGGGStEl~~~~--~~~~~~--~-~Sl~lG~v 170 (513)
T 1u6z_A 100 DFLKRAEKVIPYPI-EIISGNEEARLIFMGVEH-TQPE--KGRKLVIDIGGGSTELVIGE--NFEPIL--V-ESRRMGCV 170 (513)
T ss_dssp HHHHHHTTTCSSCE-EECCHHHHHHHHHHHHHH-HSCC--CSCEEEEEECSSCEEEEEEE--TTEEEE--E-EEESCCHH
T ss_pred HHHHHHHHHHCCCE-EEeCHHHHHHHHHHHHHh-hccC--CCCEEEEEECCCcEEEEEEe--CCeeeE--E-EEEeccHH
Confidence 34444445569875 5666555444444 3322 2221 22699999999999999864 444422 2 24689999
Q ss_pred HHHHHH
Q 005222 233 DFDDVL 238 (708)
Q Consensus 233 ~id~~l 238 (708)
.+.+.+
T Consensus 171 rlte~f 176 (513)
T 1u6z_A 171 SFAQLY 176 (513)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 887765
No 76
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=85.04 E-value=33 Score=34.24 Aligned_cols=63 Identities=11% Similarity=-0.013 Sum_probs=39.9
Q ss_pred hhhhhHHHHHHHHHHHHHcCCCCCCccEEEEecCCCC--hHHHHHHHHhHhCCCCCCCCCchhhHhchHHHHHH
Q 005222 307 ASGLTEKIAIPCRKALADAGLHVDKIHSVEIVGSGSR--IPAITRLLTSLFGREPRRSLNASECVARGCALQCA 378 (708)
Q Consensus 307 ~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~sr--ip~v~~~l~~~fg~~v~~~~n~~eava~GAa~~a~ 378 (708)
+..++++....+-..+...-. . +...|+|.||.+. .|.+.+.+++.+- -|+.+.++||+++|.
T Consensus 228 A~~i~~~~~~~L~~~l~~l~~-~-~p~~VvlgGgv~~~~~~~l~~~l~~~i~-------~~~~~~~~GAa~la~ 292 (305)
T 1zc6_A 228 ADALLRQAGEDAWAIARALDP-Q-DELPVALCGGLGQALRDWLPPGFRQRLV-------APQGDSAQGALLLLQ 292 (305)
T ss_dssp HHHHHHHHHHHHHHHHHHHCT-T-CCSCEEEESHHHHHTGGGSCHHHHHHCC-------CCSSCHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHhc-C-CCCeEEEECCchHhHHHHHHHHHHhhcc-------CCCCCHHHHHHHHHh
Confidence 344555555555555554322 2 5677999898764 5666666666531 256778999998874
No 77
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=84.41 E-value=0.66 Score=38.34 Aligned_cols=21 Identities=24% Similarity=0.325 Sum_probs=18.6
Q ss_pred CeEEEEEccccceEEEEEeCC
Q 005222 1 MSVVGFDIGNENCVIATVKHR 21 (708)
Q Consensus 1 M~vvGID~GTt~s~va~~~~~ 21 (708)
|.++|||+|+..+.+|+.++.
T Consensus 1 mriLglD~G~kriGvAvsd~~ 21 (98)
T 1iv0_A 1 MRVGALDVGEARIGLAVGEEG 21 (98)
T ss_dssp CCEEEEEESSSEEEEEEECSC
T ss_pred CcEEEEEeCCCEEEEEEEeCC
Confidence 789999999999999997654
No 78
>3hi0_A Putative exopolyphosphatase; 17739545, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 2.30A {Agrobacterium tumefaciens str}
Probab=83.23 E-value=2.3 Score=46.58 Aligned_cols=75 Identities=15% Similarity=0.184 Sum_probs=45.7
Q ss_pred HHHHHHHHHHcCCcceeeecchHHHHHh-ccccccCCCCCCceEEEEEEeCCcceEEEEEEEeCCeEEEEEEeCCCCcch
Q 005222 153 RREYLNAASIAGLRPLRLIHDCTATALG-YGIYKTDFANGGKSYIAFVDIGHSDTQVSIVSFEAGHMKVLSHAFDSSLGG 231 (708)
Q Consensus 153 r~~l~~Aa~~AGl~~~~li~Ep~Aaal~-y~~~~~~~~~~~~~~vlv~D~Gggt~dvsv~~~~~~~~~v~~~~~~~~lGG 231 (708)
...+.++-+..|+++ .+|+..+=|.+. .|.... ++ ....+|+|+|||+|.++++. ++.+. . ....++|.
T Consensus 103 ~~fl~~i~~~tG~~i-evIsG~EEA~l~~~gv~~~-~~---~~~~lvvDIGGGStEl~~~~--~~~~~--~-~~Sl~lG~ 172 (508)
T 3hi0_A 103 PDFIREAEAILGCEI-EVLSGEKEALYSAYGVISG-FY---QPDGIAGDLGGGSLELIDIK--DKSCG--E-GITLPLGG 172 (508)
T ss_dssp HHHHHHHHHHHTSCE-EECCHHHHHHHHHHHHHHH-SS---SCEEEEEEECSSCEEEEEEE--TTEEC--C-CEEESCCH
T ss_pred HHHHHHHHHHHCCCe-EEecHHHHHHHHHHHHHhc-CC---CCCeEEEEeCCCceEEEEee--CCeee--e-EEEecceE
Confidence 445555656679985 555554444433 343322 22 12359999999999999976 44332 1 12467998
Q ss_pred HHHHHH
Q 005222 232 RDFDDV 237 (708)
Q Consensus 232 ~~id~~ 237 (708)
-.+.+.
T Consensus 173 vrl~e~ 178 (508)
T 3hi0_A 173 LRLSEQ 178 (508)
T ss_dssp HHHHHH
T ss_pred Eehhhc
Confidence 888764
No 79
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X*
Probab=79.31 E-value=21 Score=38.49 Aligned_cols=58 Identities=12% Similarity=-0.070 Sum_probs=41.5
Q ss_pred CHHHHHHHHHHHHHcCCc--ceeeecchHHHHHhccccccCCCCCCceEEEEEEeCCcceEEEEEEE
Q 005222 149 TDLQRREYLNAASIAGLR--PLRLIHDCTATALGYGIYKTDFANGGKSYIAFVDIGHSDTQVSIVSF 213 (708)
Q Consensus 149 ~~~qr~~l~~Aa~~AGl~--~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~Gggt~dvsv~~~ 213 (708)
...-.+.+.+|...-|++ ++.++|+.+|++++..+.. +..++-+=+|-|+=-+.+...
T Consensus 184 G~dv~~~L~~al~r~gl~v~v~aivNDtv~tll~~~y~~-------~~~~iglIlGTG~N~~y~e~~ 243 (485)
T 3o8m_A 184 GHDVVPMLQEQIEKLNIPINVVALINDTTGTLVASLYTD-------PQTKMGIIIGTGVNGAYYDVV 243 (485)
T ss_dssp TSBHHHHHHHHHHHTTCCEEEEEEECHHHHHHHHHHHHC-------TTEEEEEEESSSEEEEEEEEG
T ss_pred CccHHHHHHHHHHhcCCCceEEEEEEcHHHHHHHHhhCC-------CCcEEEEEEecCcceEEEeec
Confidence 355678899999888886 4789999999999876542 345555557877666655554
No 80
>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8
Probab=78.13 E-value=1.2 Score=40.04 Aligned_cols=21 Identities=19% Similarity=0.477 Sum_probs=18.1
Q ss_pred CeEEEEEccccceEEEEEeCC
Q 005222 1 MSVVGFDIGNENCVIATVKHR 21 (708)
Q Consensus 1 M~vvGID~GTt~s~va~~~~~ 21 (708)
|.++|||+|+..|.+|+.+..
T Consensus 3 mriLGiDpG~~riGvAv~d~~ 23 (150)
T 1vhx_A 3 LRILGLDLGTKTLGVALSDEM 23 (150)
T ss_dssp EEEEEEEECSSEEEEEEECTT
T ss_pred CEEEEEEccCCEEEEEEEECC
Confidence 679999999999999987643
No 81
>4g9i_A Hydrogenase maturation protein HYPF; zinc finger, ATP binding, carbamoyla transferase; 4.50A {Thermococcus kodakarensis}
Probab=75.41 E-value=6.1 Score=45.33 Aligned_cols=62 Identities=16% Similarity=0.206 Sum_probs=45.1
Q ss_pred HHHHHHHHHHcCCCCCCccEEEEecCCCChHHHHHHHHhHh---CCCCCCCCC---chhhHhchHHHHHHHhC
Q 005222 315 AIPCRKALADAGLHVDKIHSVEIVGSGSRIPAITRLLTSLF---GREPRRSLN---ASECVARGCALQCAMLS 381 (708)
Q Consensus 315 ~~~i~~~l~~~~~~~~~i~~ViLvGG~srip~v~~~l~~~f---g~~v~~~~n---~~eava~GAa~~a~~~~ 381 (708)
...+..+.++.+ ++.|+|.||......+.+.|.+.+ |.++..+.. -|..+|+|+|++|+...
T Consensus 694 ~~~~~~a~~~tg-----~~~VvLSGGVa~N~~L~~~l~~~L~~~G~~v~~p~~vP~nDgGiALGQA~iA~~~L 761 (772)
T 4g9i_A 694 AHTAVERAREFG-----VKNVALSGGVAYNELITKMIRKVVEANGLNFHVTTEVPRGDNGVNVGQAFLGGLYL 761 (772)
T ss_dssp HHHHHHHHHTTT-----CSCCCEESSTTCCHHHHHHHHHHGGGSSCCCCCCTTSCSSGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhC-----cCEEEEEchHHHHHHHHHHHHHHHHHCCCEEEccCCCCCCcchHHHHHHHHHHHHH
Confidence 334444444443 567999999999999999999887 455544432 38999999999887643
No 82
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=75.25 E-value=27 Score=35.29 Aligned_cols=44 Identities=16% Similarity=0.058 Sum_probs=28.5
Q ss_pred cCCcceeeecchHHHHHhccccccCCCCCCceEEEEEEeCCcceEEEEE
Q 005222 163 AGLRPLRLIHDCTATALGYGIYKTDFANGGKSYIAFVDIGHSDTQVSIV 211 (708)
Q Consensus 163 AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~Gggt~dvsv~ 211 (708)
.|++ +.+.|+..|+|++-...... .....++++-+|.| .-.+++
T Consensus 120 ~~~p-v~v~NDa~aaalgE~~~g~~---~~~~~~v~l~~GtG-iG~giv 163 (327)
T 2ap1_A 120 LDRD-VRLDNDANCFALSEAWDDEF---TQYPLVMGLILGTG-VGGGLV 163 (327)
T ss_dssp HTSC-EEEEEHHHHHHHHHHTSTTG---GGCSEEEEEEESSS-EEEEEE
T ss_pred HCCC-EEEecHHHHHHHHHHHhCcC---CCCCcEEEEEECCc-EEEEEE
Confidence 4665 78999999999864332210 12457888888877 445554
No 83
>3aap_A Ectonucleoside triphosphate diphosphohydrolase I; adenosine triphosphatase, ntpdase; 1.60A {Legionella pneumophila} PDB: 3aaq_A* 3aar_A*
Probab=73.27 E-value=2.9 Score=43.26 Aligned_cols=19 Identities=16% Similarity=0.392 Sum_probs=17.0
Q ss_pred ceEEEEEEeCCcceEEEEE
Q 005222 193 KSYIAFVDIGHSDTQVSIV 211 (708)
Q Consensus 193 ~~~vlv~D~Gggt~dvsv~ 211 (708)
...++|+|+|||+|.+++.
T Consensus 139 ~~t~~v~DiGGGStei~~~ 157 (353)
T 3aap_A 139 NKSVGVMDMGGASVQIVFP 157 (353)
T ss_dssp SSCEEEEEECSSEEEEEEE
T ss_pred cccEEEEEeCCCceEEEEe
Confidence 3579999999999999986
No 84
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=72.53 E-value=3.7 Score=44.10 Aligned_cols=56 Identities=13% Similarity=-0.068 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHHcCCc--ceeeecchHHHHHhccccccCCCCCCceEEEEEEeCCcceEEEEEEE
Q 005222 151 LQRREYLNAASIAGLR--PLRLIHDCTATALGYGIYKTDFANGGKSYIAFVDIGHSDTQVSIVSF 213 (708)
Q Consensus 151 ~qr~~l~~Aa~~AGl~--~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~Gggt~dvsv~~~ 213 (708)
.-++.|.++....|++ ++.++|+..|++++-.+.. ...++.+=+|-|+=-+-+...
T Consensus 164 ~v~~~L~~~l~r~glpv~vval~NDa~~tll~e~~~~-------~~~~iglilGTGvgg~~i~~~ 221 (457)
T 2yhx_A 164 KLISAMXNAXFPAGDXXXSVADIXDSHGILXXVNYTD-------AXIKMGIIFGSGVNAAYWCDS 221 (457)
T ss_dssp SBHHHHHHHHHHHHCCEEEEEEECHHHHHHHHHHHHC-------TTEEEEEEESSSEEEEEEECG
T ss_pred HHHHHHHHhHhhcCCcceeEEEEecchhhccchhhcC-------CccEEEEEECcEEEEEEEECC
Confidence 4567788887666665 5899999999999876521 345666667877655555543
No 85
>3qbx_A Anhydro-N-acetylmuramic acid kinase; acetate and sugar kinases, HSP70, actin superfamily, anhydro-N-actetylmuramic acid binding; HET: AH0; 2.10A {Pseudomonas aeruginosa} PDB: 3qbw_A*
Probab=71.70 E-value=7.4 Score=40.17 Aligned_cols=69 Identities=22% Similarity=0.138 Sum_probs=43.4
Q ss_pred HhhhhhHHHHHHHHHHHHHcCCCCCCccEEEEecCCCChHHHHHHHHhHhC-CCC------CCCCCchhhHhchHHHHHH
Q 005222 306 LASGLTEKIAIPCRKALADAGLHVDKIHSVEIVGSGSRIPAITRLLTSLFG-REP------RRSLNASECVARGCALQCA 378 (708)
Q Consensus 306 ~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~srip~v~~~l~~~fg-~~v------~~~~n~~eava~GAa~~a~ 378 (708)
+...+.+-+...|.+.++...- .++.|+++||+++.|.+.++|++.++ .++ ..+.+.-||++ -|++|.
T Consensus 261 v~ATLt~~TA~sIa~~~~~~~~---~~~~v~vcGGGa~N~~Lm~~L~~~l~~~~v~~~d~~Gi~~d~~EA~a--FA~LA~ 335 (371)
T 3qbx_A 261 IQATLLELSARSISESLLDAQP---DCEEVLVCGGGAFNTALMKRLAMLMPEARVASTDEYGIPPAWMEGMA--FAWLAH 335 (371)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCT---TCCEEEEESGGGGCHHHHHHHHHHCTTSEEEEGGGGTCCTTTHHHHH--HHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhccC---CCceEEEECCccCcHHHHHHHHHhCCCCEEeCHHHcCCChhHHHHHH--HHHHHH
Confidence 3334444444555555554331 46789999999999999999999985 433 22234445544 566665
Q ss_pred H
Q 005222 379 M 379 (708)
Q Consensus 379 ~ 379 (708)
.
T Consensus 336 ~ 336 (371)
T 3qbx_A 336 R 336 (371)
T ss_dssp H
T ss_pred H
Confidence 4
No 86
>3cqy_A Anhydro-N-acetylmuramic acid kinase; APC7501, SO_1313, structural genomics, PSI-2, shewanella one MR-1, protein structure initiative; 2.30A {Shewanella oneidensis}
Probab=70.67 E-value=6.1 Score=40.85 Aligned_cols=69 Identities=13% Similarity=0.096 Sum_probs=45.2
Q ss_pred HHhhhhhHHHHHHHHHHHHHcCCCCCCccEEEEecCCCChHHHHHHHHhHhC-CCC------CCCCCchhhHhchHHHHH
Q 005222 305 ELASGLTEKIAIPCRKALADAGLHVDKIHSVEIVGSGSRIPAITRLLTSLFG-REP------RRSLNASECVARGCALQC 377 (708)
Q Consensus 305 ~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~srip~v~~~l~~~fg-~~v------~~~~n~~eava~GAa~~a 377 (708)
++...+.+-+...|.+.+.... ..+.|+++||+++.|.+.++|++.++ .++ ..+.+.-||+|. |++|
T Consensus 267 Dv~ATLt~~TA~sIa~~~~~~~----~~~~v~vcGGGa~N~~Lm~~L~~~l~~~~v~~t~~~Gi~~d~~EA~aF--A~LA 340 (370)
T 3cqy_A 267 DIQSTLLDLTCHSIAQDILKLA----QEGELFVCGGGAFNAELMQRLAALLPGYRIDTTSALGVDPKWAEGIAF--AWLA 340 (370)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHC----SSEEEEEESGGGGCHHHHHHHHHHCTTEEEEEGGGGTCCTTTHHHHHH--HHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcC----CCCEEEEECCCcCCHHHHHHHHHhCCCCeeeeHHHhCCChhHHHHHHH--HHHH
Confidence 3444444445555666665542 35689999999999999999999994 333 233455566665 5566
Q ss_pred HH
Q 005222 378 AM 379 (708)
Q Consensus 378 ~~ 379 (708)
..
T Consensus 341 ~~ 342 (370)
T 3cqy_A 341 MR 342 (370)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 87
>3ttc_A HYPF, transcriptional regulatory protein; Zn finger, nucleotide binding, hydrogenase maturation factor transferase; HET: ADP; 1.86A {Escherichia coli} PDB: 3tsp_A* 3tsu_A* 3ttf_A* 3ttd_A 3tsq_A
Probab=70.54 E-value=5.6 Score=44.57 Aligned_cols=49 Identities=10% Similarity=-0.012 Sum_probs=39.4
Q ss_pred CccEEEEecCCCChHHHHHHHHhHh-CCCCCC---CCCchhhHhchHHHHHHH
Q 005222 331 KIHSVEIVGSGSRIPAITRLLTSLF-GREPRR---SLNASECVARGCALQCAM 379 (708)
Q Consensus 331 ~i~~ViLvGG~srip~v~~~l~~~f-g~~v~~---~~n~~eava~GAa~~a~~ 379 (708)
.++.|+|+||.+....+++.|.+.+ |.++.. ..--|.++|+|.|+.|+.
T Consensus 599 g~~~VvLsGGV~~N~~Lre~L~~~l~g~~v~~p~~~p~~DnGiaLGQA~~a~~ 651 (657)
T 3ttc_A 599 GITTLVFSGGVIHNRLLRARLAHYLADFTLLFPQSLPAGDGGLSLGQGVIAAA 651 (657)
T ss_dssp TCCEEEEESGGGGCHHHHHHHHHHTTTSEEECCCSSCSSGGGHHHHHHHHHHH
T ss_pred CCCEEEEECcHHHHHHHHHHHHHHhCCCEEEecCCCCCCcHHHHHHHHHHHHH
Confidence 3678999999999999999999988 644432 233489999999998864
No 88
>1hjr_A Holliday junction resolvase (RUVC); site-specific recombinase; 2.50A {Escherichia coli} SCOP: c.55.3.6
Probab=67.93 E-value=5.1 Score=36.13 Aligned_cols=19 Identities=16% Similarity=0.345 Sum_probs=17.4
Q ss_pred CeEEEEEccccceEEEEEe
Q 005222 1 MSVVGFDIGNENCVIATVK 19 (708)
Q Consensus 1 M~vvGID~GTt~s~va~~~ 19 (708)
|.|+|||.|++++..++..
T Consensus 1 m~ILGIDPGl~~tG~gvi~ 19 (158)
T 1hjr_A 1 AIILGIDPGSRVTGYGVIR 19 (158)
T ss_dssp CEEEEEECCSSEEEEEEEE
T ss_pred CEEEEEccCCCCeeEEEEE
Confidence 8899999999999999874
No 89
>3vth_A Hydrogenase maturation factor; carbamoyltransfer, maturation of [NIFE]-hydrogenase, carbamoylphosphate, iron, HYPE; HET: APC AP2; 2.00A {Thermoanaerobacter tengcongensis} PDB: 3vti_A
Probab=66.88 E-value=7.4 Score=44.51 Aligned_cols=61 Identities=16% Similarity=0.115 Sum_probs=44.0
Q ss_pred HHHHHHHHHHcCCCCCCccEEEEecCCCChHHHHHHHHhHh---CCCCCCC---CCchhhHhchHHHHHHHh
Q 005222 315 AIPCRKALADAGLHVDKIHSVEIVGSGSRIPAITRLLTSLF---GREPRRS---LNASECVARGCALQCAML 380 (708)
Q Consensus 315 ~~~i~~~l~~~~~~~~~i~~ViLvGG~srip~v~~~l~~~f---g~~v~~~---~n~~eava~GAa~~a~~~ 380 (708)
.+.+.++.+..+ ++.|+|+||-+....+++.|.+.+ |.++..+ .--|.++|+|.|+.|+..
T Consensus 682 ~~~~~~a~~~~g-----~~~VvLsGGVa~N~~Lr~~L~~~l~~~g~~v~~p~~~p~~DgGialGQA~~a~~~ 748 (761)
T 3vth_A 682 YDLANLIRKETG-----INKVVLSGGSFQNRYLLRRLIEKLSLSGFEVYSNSKVPCNDGGISLGQAVIANKI 748 (761)
T ss_dssp HHHHHHHHHHHC-----CCEEEEESGGGGSHHHHHHHHHHHHHTTCEEEECSSSCSSGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhC-----CCEEEEECcHHHHHHHHHHHHHHHHhCCCEEEecCCCCCCchHHHHHHHHHHHHH
Confidence 334444444444 567999999999999999999887 4444332 234899999999988754
No 90
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=64.31 E-value=27 Score=37.98 Aligned_cols=44 Identities=14% Similarity=0.086 Sum_probs=32.9
Q ss_pred ceEEEEecCCCCHHHHHHHHHHHHHcCCcceeee-cchHHHHHhc
Q 005222 138 VDCVIGVPSYFTDLQRREYLNAASIAGLRPLRLI-HDCTATALGY 181 (708)
Q Consensus 138 ~~~VitVPa~~~~~qr~~l~~Aa~~AGl~~~~li-~Ep~Aaal~y 181 (708)
..++.-+|..++...-.++.+++...|+++...| .--.++.+..
T Consensus 131 ~~~I~v~~~~i~~~d~a~~in~a~~~g~~i~~~i~q~dd~vli~n 175 (607)
T 1nbw_A 131 EGWIVLIDDAVDFLDAVWWLNEALDRGINVVAAILKKDDGVLVNN 175 (607)
T ss_dssp TCEEEEECSSSCHHHHHHHHHHHHHTTCCEEEEEESSSCHHHHHT
T ss_pred CCEEEECCCccCHHHHHHHHHHHHHcCCcEEEEEEecCCEEEEcc
Confidence 4455559999999999999999999999876544 3344555543
No 91
>4ep4_A Crossover junction endodeoxyribonuclease RUVC; resolvase, hydrolase; 1.28A {Thermus thermophilus} PDB: 4ep5_A
Probab=63.86 E-value=4.8 Score=36.62 Aligned_cols=19 Identities=32% Similarity=0.403 Sum_probs=17.5
Q ss_pred CeEEEEEccccceEEEEEe
Q 005222 1 MSVVGFDIGNENCVIATVK 19 (708)
Q Consensus 1 M~vvGID~GTt~s~va~~~ 19 (708)
|-|+|||.|++++..++..
T Consensus 1 MrILGIDPGl~~tG~gvi~ 19 (166)
T 4ep4_A 1 MVVAGIDPGITHLGLGVVA 19 (166)
T ss_dssp CEEEEEECCSSEEEEEEEE
T ss_pred CEEEEEccccCceEEEEEE
Confidence 8899999999999999875
No 92
>1nu0_A Hypothetical protein YQGF; structural genomics, structure 2 function project, S2F, unknown function; 1.60A {Escherichia coli} SCOP: c.55.3.8 PDB: 1nmn_A 1ovq_A
Probab=63.18 E-value=5.3 Score=35.12 Aligned_cols=21 Identities=19% Similarity=0.377 Sum_probs=18.1
Q ss_pred eEEEEEccccceEEEEEeCCc
Q 005222 2 SVVGFDIGNENCVIATVKHRG 22 (708)
Q Consensus 2 ~vvGID~GTt~s~va~~~~~~ 22 (708)
.++|||+|+..+.||+.++.+
T Consensus 4 ~iLglD~G~kriGvAvsd~~~ 24 (138)
T 1nu0_A 4 TLMAFDFGTKSIGVAVGQRIT 24 (138)
T ss_dssp EEEEEECCSSEEEEEEEETTT
T ss_pred eEEEEEeCCCEEEEEEEcCCC
Confidence 489999999999999987643
No 93
>2e1z_A Propionate kinase; TDCD, native, acetate kinase, nucleotide, AP4A, ADP, ATP, AMPPNP, transferase; HET: B4P; 1.98A {Salmonella typhimurium} SCOP: c.55.1.2 c.55.1.2 PDB: 1x3n_A* 2e1y_A 1x3m_A* 2e20_A*
Probab=62.34 E-value=83 Score=32.85 Aligned_cols=43 Identities=16% Similarity=0.205 Sum_probs=30.6
Q ss_pred hhhHHHHHHHHHHHHHcCCCCCCccEEEEecCCC-ChHHHHHHHHhHh
Q 005222 309 GLTEKIAIPCRKALADAGLHVDKIHSVEIVGSGS-RIPAITRLLTSLF 355 (708)
Q Consensus 309 ~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s-rip~v~~~l~~~f 355 (708)
-+..++.+.|-.... -+ ..+|.|+++||-+ +.+.|++.+.+.+
T Consensus 312 ~f~yri~k~IGa~aa--~L--ggvDaIVFTgGIGEns~~vR~~i~~~l 355 (415)
T 2e1z_A 312 TFVHRIARHIAGHAA--SL--HRLDGIIFTGGIGENSVLIRQLVIEHL 355 (415)
T ss_dssp HHHHHHHHHHHHHHT--TC--SSCCEEEEEHHHHHHCHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHH--Hh--CCCCEEEECccccccCHHHHHHHHhhH
Confidence 344444444444332 23 4699999999999 9999999998776
No 94
>3cj1_A Ectonucleoside triphosphate diphosphohydrolase 2; alpha/beta protein, actin-like fold, alternative splicing, calcium, glycoprotein, magnesium; 1.70A {Rattus norvegicus} PDB: 3cj7_A* 3cj9_A* 3cja_A*
Probab=61.23 E-value=8.9 Score=41.07 Aligned_cols=20 Identities=25% Similarity=0.484 Sum_probs=17.1
Q ss_pred ceEEEEEEeCCcceEEEEEE
Q 005222 193 KSYIAFVDIGHSDTQVSIVS 212 (708)
Q Consensus 193 ~~~vlv~D~Gggt~dvsv~~ 212 (708)
...++|+|+|||+|.++...
T Consensus 189 ~~t~gvlDlGGgStqi~~~~ 208 (456)
T 3cj1_A 189 KGTLGAMDLGGASTQITFET 208 (456)
T ss_dssp CCCCEEEEECSSEEEEEEEC
T ss_pred CCceEEEEcCCCceEEEecc
Confidence 45689999999999999874
No 95
>3ven_A O-carbamoyltransferase TOBZ; antibiotic biosynthesis, substrate assisted catalysis, subst channeling, adenylation; HET: TLA; 1.57A {Streptoalloteichus tenebrarius} PDB: 3veo_A 3ves_A* 3vet_A* 3vew_A* 3ver_A* 3vf4_A* 3vf2_A* 3vex_A* 3vez_A*
Probab=61.16 E-value=11 Score=41.35 Aligned_cols=65 Identities=14% Similarity=0.023 Sum_probs=46.6
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEEecCCCChHHHHHHHHhHhCC-CCCCC-CCchhhHhchHHHHHHHhCC
Q 005222 313 KIAIPCRKALADAGLHVDKIHSVEIVGSGSRIPAITRLLTSLFGR-EPRRS-LNASECVARGCALQCAMLSP 382 (708)
Q Consensus 313 ~i~~~i~~~l~~~~~~~~~i~~ViLvGG~srip~v~~~l~~~fg~-~v~~~-~n~~eava~GAa~~a~~~~~ 382 (708)
-+...+..+.+..+ ++.|+|.||.+....+.+.|.+..+. .+..+ .-.|.++++|+|+++....+
T Consensus 294 ~L~~~~~~a~~~tg-----~~~l~LaGGVa~N~~L~~~l~~~~~~~~v~vpp~~~D~G~aiGqA~~a~~~~g 360 (576)
T 3ven_A 294 AVFGLADSVLARTG-----ERTLFVAGGVGLNATMNGKLLTRSTVDKMFVPPVASDIGVSLGAAAAVAVELG 360 (576)
T ss_dssp HHHHHHHHHHHHHT-----CSEEEEESGGGGCHHHHHHHHTSTTCSEEECCTTCSGGGHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHcC-----CCeEEecchHHHHHHHHHHHHHhcCCCeEEeCCCCCchHHHHHHHHHHHHHcC
Confidence 33444455555544 67899999999999999999877653 33222 34589999999999987644
No 96
>1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=60.80 E-value=65 Score=33.88 Aligned_cols=127 Identities=17% Similarity=0.147 Sum_probs=0.0
Q ss_pred EEEEEccccceEEEEEeCCceEEEeCCCCCccceEEEEEcCCcEEEcHHHHHhHhcCCcchHHHHHHhhCCCCCChHHHh
Q 005222 3 VVGFDIGNENCVIATVKHRGVDVLLNEESNRETPSIVCFGEKQRFIGAAGYASAMMHPKSTVSQVKRLIGRRYGDPVVQK 82 (708)
Q Consensus 3 vvGID~GTt~s~va~~~~~~~~ii~~~~g~r~~Ps~v~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~llg~~~~~~~v~~ 82 (708)
++|||+|.|++++++++..
T Consensus 110 ~lGIDiGgt~i~~~l~d~~------------------------------------------------------------- 128 (429)
T 1z05_A 110 FLSMRLGRGYLTIALHELG------------------------------------------------------------- 128 (429)
T ss_dssp EEEEEEETTEEEEEEEETT-------------------------------------------------------------
T ss_pred EEEEEECCCEEEEEEECCC-------------------------------------------------------------
Q ss_pred hhccCCceeeecCCCCeEEEEEecCceeeecHHHHHHHHHHHHHHHHHhh--cCCCcceEEEEecCCCCHHHH-------
Q 005222 83 DLMVLPFESCESPDGGISIKLKYLGETHTFCPVQVMGMLFSHLKDVAEKN--LEMPVVDCVIGVPSYFTDLQR------- 153 (708)
Q Consensus 83 ~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~el~a~~L~~l~~~a~~~--~~~~~~~~VitVPa~~~~~qr------- 153 (708)
|.+..+........ ++++++..+...+.+..... ....+..+.|++|...+....
T Consensus 129 --------------G~il~~~~~~~~~~--~~~~~~~~l~~~i~~~~~~~~~~~~~i~gigi~~pG~vd~~~g~v~~~~~ 192 (429)
T 1z05_A 129 --------------GEVLIDTKIDIHEI--DQDDVLARLLFEIEEFFQTYAAQLDRVTSIAITLPGLVNSEQGIVLQMPH 192 (429)
T ss_dssp --------------SCEEEEEEEECCCC--BHHHHHHHHHHHHHHHHHHTTTTCCEEEEEEEEESSEEETTTTEEEECSS
T ss_pred --------------CCEEEEEEEcCCCC--CHHHHHHHHHHHHHHHHHhcCCCcCceEEEEEeccCcEeCCCCeEeecCC
Q ss_pred ------HHHHHHHHHcCCcceeeecchHHHHHhccccccCCCCCCceEEEEEEeCCcceEEEEE
Q 005222 154 ------REYLNAASIAGLRPLRLIHDCTATALGYGIYKTDFANGGKSYIAFVDIGHSDTQVSIV 211 (708)
Q Consensus 154 ------~~l~~Aa~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~Gggt~dvsv~ 211 (708)
..-....+..|++ +.+.|+..|+|++-...... .....++++-+|.| .-.+++
T Consensus 193 l~w~~~~l~~~L~~~~~~p-V~v~NDa~aaalaE~~~g~~---~~~~~~v~l~~GtG-iG~giv 251 (429)
T 1z05_A 193 YNVKNLALGPEIYKATGLP-VFVANDTRAWALAEKLFGHS---QDVDNSVLISIHHG-LGAGIV 251 (429)
T ss_dssp SBCSSBCHHHHHHHHHCSC-EEEEEHHHHHHHHHHHHSTT---TTCSSEEEEEESSS-EEEEEE
T ss_pred CCCCCCCHHHHHHHHhCCC-EEEechhHHHHHHHHHhCCC---CCCCcEEEEEECCc-EEEEEE
No 97
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=60.51 E-value=36 Score=36.93 Aligned_cols=46 Identities=17% Similarity=0.117 Sum_probs=35.0
Q ss_pred CcceEEEEecCCCCHHHHHHHHHHHHHcCCcceeee-cchHHHHHhc
Q 005222 136 PVVDCVIGVPSYFTDLQRREYLNAASIAGLRPLRLI-HDCTATALGY 181 (708)
Q Consensus 136 ~~~~~VitVPa~~~~~qr~~l~~Aa~~AGl~~~~li-~Ep~Aaal~y 181 (708)
+-..+++.||..++..+-.++.+++...|+++...| .--.++.+..
T Consensus 127 ~~~~~i~~~~~~~df~~~a~~in~~~~~g~~i~~~i~q~dd~vli~n 173 (610)
T 2d0o_A 127 ADAPYILVVSSAFDFADIASVINASLRAGYQITGVILQRDDGVLVSN 173 (610)
T ss_dssp TTSEEEEEECTTSCHHHHHHHHHHHHHTTCEEEEEEESSSCHHHHHH
T ss_pred CCCcEEEEECCcCCHHHHHHHHHHHHHCCCcEEEEEEecCCEEEEcc
Confidence 455699999999999999999999999999866543 3334444443
No 98
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}
Probab=56.68 E-value=6.7 Score=38.73 Aligned_cols=21 Identities=14% Similarity=0.213 Sum_probs=18.6
Q ss_pred eEEEEEccccceEEEEEeCCc
Q 005222 2 SVVGFDIGNENCVIATVKHRG 22 (708)
Q Consensus 2 ~vvGID~GTt~s~va~~~~~~ 22 (708)
.+++||+|+|+++.++++++.
T Consensus 3 MlL~IDIGNT~iK~gl~d~~~ 23 (266)
T 3djc_A 3 LILCIDVGNSHIYGGVFDGDE 23 (266)
T ss_dssp CEEEEEECSSEEEEEEEETTE
T ss_pred eEEEEEECCCeEEEEEEECCE
Confidence 589999999999999998653
No 99
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=56.31 E-value=6.6 Score=42.81 Aligned_cols=20 Identities=5% Similarity=0.139 Sum_probs=17.1
Q ss_pred eEEEEEccccceEEEEEeCC
Q 005222 2 SVVGFDIGNENCVIATVKHR 21 (708)
Q Consensus 2 ~vvGID~GTt~s~va~~~~~ 21 (708)
.++|||+|||++++++++..
T Consensus 5 ~~lgIDiGtT~~k~~l~d~~ 24 (503)
T 2w40_A 5 VILSIDQSTQSTKVFFYDEE 24 (503)
T ss_dssp EEEEEEECSSEEEEEEEETT
T ss_pred EEEEEEeCCcceEEEEECCC
Confidence 48999999999999987643
No 100
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=54.56 E-value=7.6 Score=42.32 Aligned_cols=20 Identities=15% Similarity=0.278 Sum_probs=17.3
Q ss_pred eEEEEEccccceEEEEEeCC
Q 005222 2 SVVGFDIGNENCVIATVKHR 21 (708)
Q Consensus 2 ~vvGID~GTt~s~va~~~~~ 21 (708)
.++|||+|||++++++++..
T Consensus 5 ~~lgIDiGtts~K~~l~d~~ 24 (504)
T 3ll3_A 5 YIIGMDVGTTATKGVLYDIN 24 (504)
T ss_dssp EEEEEEECSSEEEEEEEETT
T ss_pred EEEEEEecCCceEEEEEcCC
Confidence 48999999999999988643
No 101
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3
Probab=54.55 E-value=27 Score=37.24 Aligned_cols=62 Identities=8% Similarity=-0.017 Sum_probs=42.4
Q ss_pred ecCCCCHHHHHHHHHHHHHcCCc--ceeeecchHHHHHhccccccCCCCCCceEEEEEEeCCcceEEEEEE
Q 005222 144 VPSYFTDLQRREYLNAASIAGLR--PLRLIHDCTATALGYGIYKTDFANGGKSYIAFVDIGHSDTQVSIVS 212 (708)
Q Consensus 144 VPa~~~~~qr~~l~~Aa~~AGl~--~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~Gggt~dvsv~~ 212 (708)
+|..-...-.+.|.+|...-|++ ++.++|+..|++++..... +..++-+=+|-|+=-+-+..
T Consensus 166 ~~~~~g~dv~~~L~~al~r~~l~v~v~al~NDtv~tlla~~y~~-------~~~~iglIlGTG~na~yve~ 229 (451)
T 1bdg_A 166 ADGVEGHNVAELLQTELDKRELNVKCVAVVNDTVGTLASCALED-------PKCAVGLIVGTGTNVAYIED 229 (451)
T ss_dssp CBTCTTSBHHHHHHHHHHTTTCCEEEEEEECHHHHHHHHHHTTC-------TTEEEEEEESSSEEEEEEEE
T ss_pred CCCCCCCcHHHHHHHHHHHcCCCcceEEEEEchHHHHHHhcccC-------CCcEEEEEEeCCcceEEEEc
Confidence 34333456688888888877876 3589999999998776542 34566666788765555544
No 102
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=54.52 E-value=6.3 Score=42.89 Aligned_cols=20 Identities=10% Similarity=0.134 Sum_probs=17.1
Q ss_pred eEEEEEccccceEEEEEeCC
Q 005222 2 SVVGFDIGNENCVIATVKHR 21 (708)
Q Consensus 2 ~vvGID~GTt~s~va~~~~~ 21 (708)
.++|||+|||++++++++..
T Consensus 3 ~~lgiDiGtT~~k~~l~d~~ 22 (495)
T 2dpn_A 3 FLLALDQGTTSSRAILFTLE 22 (495)
T ss_dssp CEEEEEECSSEEEEEEECTT
T ss_pred EEEEEeeCCcceEEEEECCC
Confidence 48999999999999987643
No 103
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=52.09 E-value=8.2 Score=42.34 Aligned_cols=19 Identities=21% Similarity=0.410 Sum_probs=16.4
Q ss_pred eEEEEEccccceEEEEEeC
Q 005222 2 SVVGFDIGNENCVIATVKH 20 (708)
Q Consensus 2 ~vvGID~GTt~s~va~~~~ 20 (708)
.++|||+|||.+++++++.
T Consensus 5 YvlgID~GTss~Ka~l~d~ 23 (526)
T 3ezw_A 5 YIVALDQGTTSSRAVVMDH 23 (526)
T ss_dssp EEEEEEECSSEEEEEEECT
T ss_pred EEEEEEccccceeeeEEcC
Confidence 3799999999999988753
No 104
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=51.97 E-value=9 Score=41.81 Aligned_cols=19 Identities=21% Similarity=0.410 Sum_probs=16.8
Q ss_pred eEEEEEccccceEEEEEeC
Q 005222 2 SVVGFDIGNENCVIATVKH 20 (708)
Q Consensus 2 ~vvGID~GTt~s~va~~~~ 20 (708)
.++|||+|||++++++++.
T Consensus 4 ~~lgIDiGtts~k~~l~d~ 22 (510)
T 2p3r_A 4 YIVALDQGTTSSRAVVMDH 22 (510)
T ss_dssp EEEEEEECSSEEEEEEECT
T ss_pred EEEEEEcCCcceEEEEECC
Confidence 5899999999999998764
No 105
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=51.96 E-value=9.6 Score=42.08 Aligned_cols=20 Identities=15% Similarity=0.358 Sum_probs=17.3
Q ss_pred eEEEEEccccceEEEEEeCC
Q 005222 2 SVVGFDIGNENCVIATVKHR 21 (708)
Q Consensus 2 ~vvGID~GTt~s~va~~~~~ 21 (708)
.++|||+|||++++++++..
T Consensus 6 ~~lgIDiGtts~ka~l~d~~ 25 (554)
T 3l0q_A 6 YFIGVDVGTGSARAGVFDLQ 25 (554)
T ss_dssp EEEEEEECSSEEEEEEEETT
T ss_pred EEEEEEECcccEEEEEECCC
Confidence 58999999999999988643
No 106
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=51.11 E-value=8.4 Score=41.96 Aligned_cols=20 Identities=10% Similarity=0.253 Sum_probs=17.1
Q ss_pred eEEEEEccccceEEEEEeCC
Q 005222 2 SVVGFDIGNENCVIATVKHR 21 (708)
Q Consensus 2 ~vvGID~GTt~s~va~~~~~ 21 (708)
.++|||+|||++++++++..
T Consensus 7 ~~lgIDiGtts~k~~l~d~~ 26 (501)
T 3g25_A 7 YILSIDQGTTSSRAILFNQK 26 (501)
T ss_dssp EEEEEEECSSEEEEEEECTT
T ss_pred EEEEEEeCccceEEEEEcCC
Confidence 48999999999999887643
No 107
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=50.35 E-value=8.7 Score=41.75 Aligned_cols=19 Identities=16% Similarity=0.216 Sum_probs=16.8
Q ss_pred eEEEEEccccceEEEEEeC
Q 005222 2 SVVGFDIGNENCVIATVKH 20 (708)
Q Consensus 2 ~vvGID~GTt~s~va~~~~ 20 (708)
.++|||+|||++++++++.
T Consensus 4 ~~lgiDiGtt~~k~~l~d~ 22 (497)
T 2zf5_O 4 FVLSLDEGTTSARAIIFDR 22 (497)
T ss_dssp EEEEEEECSSEEEEEEECT
T ss_pred EEEEEecCCchhEEEEECC
Confidence 5899999999999988764
No 108
>3nmd_A CGMP dependent protein kinase; leucine zipper, coiled-coil, structural genomics, berkeley S genomics center, BSGC, dimerization; HET: MSE; 2.27A {Homo sapiens}
Probab=50.24 E-value=47 Score=25.25 Aligned_cols=46 Identities=22% Similarity=0.250 Sum_probs=36.4
Q ss_pred HHHHHHHHHHhhcchhHHHHHHHhhhHHHHHHHHHHHhhhhhccCCC
Q 005222 578 ALAQETENLLAQQDITMEQTKDKKNALESYVYEMRNKLFSTYRSFAS 624 (708)
Q Consensus 578 ~~~~~~~~~~~~~D~~~~~~~~a~N~LEs~iy~~r~~l~~~~~~~~~ 624 (708)
..+.++.+++..+|...++++....+.|+.|-.+|+.|+. |+..++
T Consensus 26 ~~L~~K~eELr~kd~~I~eLEk~L~ekd~eI~~LqseLDK-frSVl~ 71 (72)
T 3nmd_A 26 YALQEKIEELRQRDALIDELELELDQKDELIQMLQNELDK-YRSVIR 71 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TTTTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhccCC
Confidence 4455677888889999999999999999999999888854 655443
No 109
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=49.76 E-value=11 Score=41.18 Aligned_cols=21 Identities=29% Similarity=0.556 Sum_probs=17.7
Q ss_pred eEEEEEccccceEEEEEeCCc
Q 005222 2 SVVGFDIGNENCVIATVKHRG 22 (708)
Q Consensus 2 ~vvGID~GTt~s~va~~~~~~ 22 (708)
.++|||+|||++++++++..+
T Consensus 8 ~~lgIDiGtts~k~~l~d~~G 28 (508)
T 3ifr_A 8 QVIGLDIGTTSTIAILVRLPD 28 (508)
T ss_dssp EEEEEEECSSEEEEEEEETTT
T ss_pred EEEEEEecCcceEEEEECCCC
Confidence 479999999999999886443
No 110
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=49.47 E-value=10 Score=41.30 Aligned_cols=20 Identities=15% Similarity=0.213 Sum_probs=17.2
Q ss_pred eEEEEEccccceEEEEEeCC
Q 005222 2 SVVGFDIGNENCVIATVKHR 21 (708)
Q Consensus 2 ~vvGID~GTt~s~va~~~~~ 21 (708)
.++|||+|||++++++++..
T Consensus 6 ~~lgIDiGtts~k~~l~d~~ 25 (506)
T 3h3n_X 6 YVMAIDQGTTSSRAIIFDRN 25 (506)
T ss_dssp EEEEEEECSSEEEEEEEETT
T ss_pred EEEEEEcCCCceEEEEECCC
Confidence 48999999999999987643
No 111
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=49.32 E-value=7.3 Score=42.21 Aligned_cols=20 Identities=10% Similarity=0.180 Sum_probs=16.6
Q ss_pred eEEEEEccccceEEEEEeCC
Q 005222 2 SVVGFDIGNENCVIATVKHR 21 (708)
Q Consensus 2 ~vvGID~GTt~s~va~~~~~ 21 (708)
.++|||+|||++++++++..
T Consensus 7 ~~lgIDiGTts~Ka~l~d~~ 26 (482)
T 3h6e_A 7 ATIVIDLGKTLSKVSLWDLD 26 (482)
T ss_dssp -CEEEEECSSEEEEEEECTT
T ss_pred eEEEEEcCCCCeEEEEEECC
Confidence 47999999999999988643
No 112
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=49.17 E-value=9.7 Score=41.63 Aligned_cols=18 Identities=22% Similarity=0.529 Sum_probs=16.7
Q ss_pred eEEEEEccccceEEEEEe
Q 005222 2 SVVGFDIGNENCVIATVK 19 (708)
Q Consensus 2 ~vvGID~GTt~s~va~~~ 19 (708)
.++|||+|||++++++++
T Consensus 6 ~~lgIDiGtts~ka~l~d 23 (515)
T 3i8b_A 6 LVAGVDTSTQSCKVRVTD 23 (515)
T ss_dssp EEEEEEECSSEEEEEEEE
T ss_pred EEEEEEeccccEEEEEEE
Confidence 489999999999999987
No 113
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=49.03 E-value=10 Score=41.37 Aligned_cols=20 Identities=25% Similarity=0.390 Sum_probs=17.2
Q ss_pred eEEEEEccccceEEEEEeCC
Q 005222 2 SVVGFDIGNENCVIATVKHR 21 (708)
Q Consensus 2 ~vvGID~GTt~s~va~~~~~ 21 (708)
.++|||+|||++++++++..
T Consensus 6 ~~lgIDiGtts~k~~l~d~~ 25 (511)
T 3hz6_A 6 YIATFDIGTTEVKAALADRD 25 (511)
T ss_dssp EEEEEEECSSEEEEEEECTT
T ss_pred EEEEEEeCCCceEEEEECCC
Confidence 58999999999999887643
No 114
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=48.20 E-value=7.4 Score=42.20 Aligned_cols=18 Identities=17% Similarity=0.366 Sum_probs=16.2
Q ss_pred eEEEEEccccceEEEEEe
Q 005222 2 SVVGFDIGNENCVIATVK 19 (708)
Q Consensus 2 ~vvGID~GTt~s~va~~~ 19 (708)
.++|||+|||++++++++
T Consensus 5 ~~lgiDiGtts~k~~l~d 22 (489)
T 2uyt_A 5 NCVAVDLGASSGRVMLAR 22 (489)
T ss_dssp EEEEEEECSSEEEEEEEE
T ss_pred eEEEEEecCCCceEEEEE
Confidence 489999999999999875
No 115
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=48.14 E-value=11 Score=41.42 Aligned_cols=20 Identities=15% Similarity=0.446 Sum_probs=17.0
Q ss_pred eEEEEEccccceEEEEEeCC
Q 005222 2 SVVGFDIGNENCVIATVKHR 21 (708)
Q Consensus 2 ~vvGID~GTt~s~va~~~~~ 21 (708)
.++|||+|||.+++++++..
T Consensus 11 ~~lgID~GTts~Ka~l~d~~ 30 (538)
T 4bc3_A 11 CCLGWDFSTQQVKVVAVDAE 30 (538)
T ss_dssp EEEEEEECSSEEEEEEEETT
T ss_pred EEEEEEEcCcCEEEEEECCC
Confidence 48999999999999887643
No 116
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=47.34 E-value=11 Score=41.93 Aligned_cols=19 Identities=21% Similarity=0.338 Sum_probs=17.0
Q ss_pred eEEEEEccccceEEEEEeC
Q 005222 2 SVVGFDIGNENCVIATVKH 20 (708)
Q Consensus 2 ~vvGID~GTt~s~va~~~~ 20 (708)
.++|||+|||++++++++.
T Consensus 6 ~~lgIDiGTts~Ka~l~d~ 24 (572)
T 3jvp_A 6 YTIGVDYGTESGRAVLIDL 24 (572)
T ss_dssp EEEEEEECSSEEEEEEEET
T ss_pred EEEEEecCCcceEEEEEEC
Confidence 5899999999999998864
No 117
>2odv_A Plectin 1, HD1; plakin domain, spectrin repeat, cytoskeleton, hemidesmosomes epidermolysis bullosa, structural protein; 2.05A {Homo sapiens} PDB: 2odu_A
Probab=47.30 E-value=1.5e+02 Score=28.23 Aligned_cols=94 Identities=12% Similarity=0.150 Sum_probs=59.5
Q ss_pred CCHHHHHHHHHHHHHHhhcchhHHHHHHHhhhHHHHHHHHHHHhhhhhccCCCHH-----HH----HHHHHHHHHHHHHh
Q 005222 572 MTKPELALAQETENLLAQQDITMEQTKDKKNALESYVYEMRNKLFSTYRSFASDQ-----ER----EGISRSLQETEEWL 642 (708)
Q Consensus 572 ls~~e~~~~~~~~~~~~~~D~~~~~~~~a~N~LEs~iy~~r~~l~~~~~~~~~~~-----e~----~~l~~~l~e~~~WL 642 (708)
=|-.+++........|...++ .-+..-|++||..++.++.+|.. ..|.+|+ +. ..|...-.+-+.||
T Consensus 41 ~sl~~vq~~l~~f~~fr~~ek--ppk~~EK~~Le~ll~~lqtklr~--~~~~ppeg~~~~di~~~W~~Le~ae~eRe~aL 116 (235)
T 2odv_A 41 SSFEEIEILWSQFLKFKEMEL--PAKEADKNRSKGIYQSLEGAVQA--GQLKVPPGYHPLDVEKEWGKLHVAILEREKQL 116 (235)
T ss_dssp SSHHHHHHHHHHHHHHHHHTH--HHHHHHHHHHHHHHHHHHHHHHT--TSSCCCTTCSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHhccC--CHHHHHHHHHHHHHHHHHHHHHc--CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 456677777777777776444 77788899999999999999973 2233322 22 34455555566666
Q ss_pred hcCCCCcCHHHHHHHHHHHHHhHHHHHHHHHhhhHH
Q 005222 643 YDDGDDETANTYASKLEDLKKLVDPIENRYKDGEAR 678 (708)
Q Consensus 643 ~~~~~~a~~~~~~~kl~~L~~~~~pi~~R~~e~~~r 678 (708)
..+ ..+++.|..+...+...+...+.+
T Consensus 117 ~~e---------l~RlerLe~La~kf~rka~~~e~~ 143 (235)
T 2odv_A 117 RSE---------FERLEALQRIVTKLQMEAGLAEEQ 143 (235)
T ss_dssp HHH---------HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHH---------HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 543 445556666666666555444443
No 118
>3hm8_A Hexokinase-3; glucose, glucose-6-phosphate, non-protein kinase, structural genomics consortium, SGC, A enzyme, ATP-binding, glycolysis; HET: GLC BG6; 2.80A {Homo sapiens}
Probab=46.77 E-value=2e+02 Score=30.29 Aligned_cols=57 Identities=11% Similarity=0.048 Sum_probs=38.1
Q ss_pred CHHHHHHHHHHHHHcC---CcceeeecchHHHHHhccccccCCCCCCceEEEEEEeCCcceEEEEEE
Q 005222 149 TDLQRREYLNAASIAG---LRPLRLIHDCTATALGYGIYKTDFANGGKSYIAFVDIGHSDTQVSIVS 212 (708)
Q Consensus 149 ~~~qr~~l~~Aa~~AG---l~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~Gggt~dvsv~~ 212 (708)
...-.+.|.+|...-| ++++.++|+.+|+.++.++.. +...+-+=+|-||=-+.+.+
T Consensus 159 G~dv~~lL~~al~r~~~~~v~vvAivNDTvgTLla~~y~~-------~~~~iglIlGTGtNa~y~e~ 218 (445)
T 3hm8_A 159 GQDVVSLLREAITRRQAVELNVVAIVNDTVGTMMSCGYED-------PRCEIGLIVGTGTNACYMEE 218 (445)
T ss_dssp TSBHHHHHHHHHHHTTCSCCCSEEEECHHHHHHHHHHTTC-------TTEEEEEEESSSEEEEEEEE
T ss_pred CCcHHHHHHHHHHhcCCCCcceEEEecCcHHHHHhhccCC-------CCceEEEEEeCCceEEEEEe
Confidence 3455778888887653 568999999999998765432 23444455677765554443
No 119
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=46.38 E-value=12 Score=40.79 Aligned_cols=20 Identities=10% Similarity=0.179 Sum_probs=17.1
Q ss_pred eEEEEEccccceEEEEEeCC
Q 005222 2 SVVGFDIGNENCVIATVKHR 21 (708)
Q Consensus 2 ~vvGID~GTt~s~va~~~~~ 21 (708)
.++|||+|||++++++++..
T Consensus 27 ~~lgIDiGtts~k~~l~d~~ 46 (520)
T 4e1j_A 27 YILAIDQGTTSTRAIVFDGN 46 (520)
T ss_dssp EEEEEEECSSEEEEEEECTT
T ss_pred eEEEEEeCCcceEEEEECCC
Confidence 48999999999999887643
No 120
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=45.76 E-value=54 Score=32.32 Aligned_cols=42 Identities=19% Similarity=0.153 Sum_probs=28.1
Q ss_pred cCCcceeeecchHHHHHhccccccCCCCCCceEEEEEEeCCcceEEEEE
Q 005222 163 AGLRPLRLIHDCTATALGYGIYKTDFANGGKSYIAFVDIGHSDTQVSIV 211 (708)
Q Consensus 163 AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~Gggt~dvsv~ 211 (708)
.|++ +.+.|+..|||++... .. ....+++++-+|.| .-.+++
T Consensus 94 ~~~p-v~v~NDa~aaa~~e~~-~~----~~~~~~v~l~~GtG-iG~giv 135 (292)
T 2gup_A 94 YQLP-VHLENDANCVGLSELL-AH----PELENAACVVIGTG-IGGAMI 135 (292)
T ss_dssp GCCC-EEEEEHHHHHHHHHHH-HC----TTCSSEEEEEESSS-EEEEEE
T ss_pred cCCC-EEEechHHHHHHHHHH-hc----CCCCeEEEEEECCc-eEEEEE
Confidence 4665 6899999999987543 11 23456788888877 445554
No 121
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=44.73 E-value=39 Score=33.94 Aligned_cols=48 Identities=19% Similarity=0.047 Sum_probs=32.2
Q ss_pred ccEEEEecCCCC-hHHHHHHHHhHhC----------CCCCCCCCchhhHhchHHHHHHH
Q 005222 332 IHSVEIVGSGSR-IPAITRLLTSLFG----------REPRRSLNASECVARGCALQCAM 379 (708)
Q Consensus 332 i~~ViLvGG~sr-ip~v~~~l~~~fg----------~~v~~~~n~~eava~GAa~~a~~ 379 (708)
++.|+|.||.+. .|.+.+.+++.+. .++....-.+.+.++|||.++..
T Consensus 263 p~~IvlgGg~~~~~~~~~~~l~~~l~~~~~~~~~~~~~i~~~~~~~~a~~~GAa~l~~~ 321 (326)
T 2qm1_A 263 PDSVVIGGGVSAAGEFLRSRVEKYFQEFTFPQVRNSTKIKLAELGNEAGVIGAASLALQ 321 (326)
T ss_dssp CSEEEEEESGGGGTHHHHHHHHHHHHHTSCHHHHTTSEEEECSSGGGHHHHHHHHHGGG
T ss_pred CCEEEEcChhhhchHHHHHHHHHHHHHhhhhccCCCcEEEEcCcCchHHHHHHHHHHHH
Confidence 467999999876 5777777766652 12222334567899999988754
No 122
>3zx3_A Ectonucleoside triphosphate diphosphohydrolase 1; domain rotation, purinergic signaling; 1.70A {Rattus norvegicus} PDB: 3zx2_A* 3zx0_A*
Probab=44.06 E-value=23 Score=37.70 Aligned_cols=44 Identities=27% Similarity=0.440 Sum_probs=26.3
Q ss_pred ceeeecchHHHHHh-----ccccccCCCCCCceEEEEEEeCCcceEEEEEE
Q 005222 167 PLRLIHDCTATALG-----YGIYKTDFANGGKSYIAFVDIGHSDTQVSIVS 212 (708)
Q Consensus 167 ~~~li~Ep~Aaal~-----y~~~~~~~~~~~~~~vlv~D~Gggt~dvsv~~ 212 (708)
.+++|+...=+.++ |.+.. +.......+.++|+|||++.++...
T Consensus 151 ~v~iisG~eEg~y~wi~vnyllg~--l~~~~~~t~g~lDlGGgStQi~f~~ 199 (452)
T 3zx3_A 151 GAKIITGQEEGAYGWITINYLLGR--FKTPGGSTFGALDLGGASTQITFVP 199 (452)
T ss_dssp EEEECCHHHHHHHHHHHHHHHTTT--TC---CCCCEEEEECSSEEEEEECC
T ss_pred ceEECCchhhhhhhHHHHHhhhcc--ccCCCCCceEEEecCCCceEEEecc
Confidence 46777766554443 33322 1111235688999999999998654
No 123
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=43.00 E-value=14 Score=39.96 Aligned_cols=18 Identities=17% Similarity=0.503 Sum_probs=16.0
Q ss_pred EEEEEccccceEEEEEeC
Q 005222 3 VVGFDIGNENCVIATVKH 20 (708)
Q Consensus 3 vvGID~GTt~s~va~~~~ 20 (708)
++|||+|||++++++++.
T Consensus 2 ~lgiDiGtt~~k~~l~d~ 19 (484)
T 2itm_A 2 YIGIDLGTSGVKVILLNE 19 (484)
T ss_dssp EEEEEECSSEEEEEEECT
T ss_pred EEEEEecCcccEEEEECC
Confidence 699999999999998764
No 124
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X*
Probab=42.84 E-value=70 Score=34.35 Aligned_cols=30 Identities=13% Similarity=0.277 Sum_probs=24.0
Q ss_pred CceEEEEEEeCCcceEEEEEEEeCC-eEEEE
Q 005222 192 GKSYIAFVDIGHSDTQVSIVSFEAG-HMKVL 221 (708)
Q Consensus 192 ~~~~vlv~D~Gggt~dvsv~~~~~~-~~~v~ 221 (708)
+...+|.+|+||.++-+.++.+.+. .+++.
T Consensus 78 E~G~~LalDlGGTn~Rv~~V~l~g~~~~~~~ 108 (485)
T 3o8m_A 78 ETGDFLALDLGGTNLRVVLVKLGGNHDFDTT 108 (485)
T ss_dssp CEEEEEEEEESSSEEEEEEEEEESSSCEEEE
T ss_pred cceEEEEEEecCCeEEEEEEEECCCCceEEE
Confidence 3467999999999999999999764 34444
No 125
>3bex_A Type III pantothenate kinase; actin-like fold, ATP-binding, coenzyme A biosynthesis, cytoplasm, metal-binding, nucleotide-binding, potassium; HET: PAU; 1.51A {Thermotoga maritima} SCOP: c.55.1.13 c.55.1.13 PDB: 3bf1_A* 3bf3_A* 2gtd_A
Probab=42.74 E-value=14 Score=35.95 Aligned_cols=22 Identities=18% Similarity=0.250 Sum_probs=18.6
Q ss_pred CeEEEEEccccceEEEEEeCCc
Q 005222 1 MSVVGFDIGNENCVIATVKHRG 22 (708)
Q Consensus 1 M~vvGID~GTt~s~va~~~~~~ 22 (708)
|..++||+|+|+++.++++++.
T Consensus 3 ~M~L~IDIGNT~ik~gl~~~~~ 24 (249)
T 3bex_A 3 PMYLLVDVGNTHSVFSITEDGK 24 (249)
T ss_dssp CEEEEEEECSSEEEEEEESSSS
T ss_pred ceEEEEEECCCeEEEEEEECCE
Confidence 3579999999999999987553
No 126
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=41.37 E-value=13 Score=40.34 Aligned_cols=20 Identities=20% Similarity=0.308 Sum_probs=17.0
Q ss_pred eEEEEEccccceEEEEEeCC
Q 005222 2 SVVGFDIGNENCVIATVKHR 21 (708)
Q Consensus 2 ~vvGID~GTt~s~va~~~~~ 21 (708)
.++|||+|||++++++++..
T Consensus 3 ~~lgiDiGtts~k~~l~d~~ 22 (504)
T 2d4w_A 3 YVLAIDQGTTSSRAIVFDHS 22 (504)
T ss_dssp EEEEEEECSSEEEEEEECTT
T ss_pred EEEEEecCCcceEEEEECCC
Confidence 47999999999999887643
No 127
>2wl8_A Peroxisomal biogenesis factor 19; protein transport, biogenesis disorder, zellweger syndrome, membrane, prenylation; 2.05A {Homo sapiens}
Probab=40.86 E-value=51 Score=28.21 Aligned_cols=45 Identities=11% Similarity=0.322 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHHHhhcCCCCcCHHHHHHHHHHHHHhHHHHHHHHHh
Q 005222 629 EGISRSLQETEEWLYDDGDDETANTYASKLEDLKKLVDPIENRYKD 674 (708)
Q Consensus 629 ~~l~~~l~e~~~WL~~~~~~a~~~~~~~kl~~L~~~~~pi~~R~~e 674 (708)
+-++++.+++=.||.++.+..+.+++ +|+..=..++..|...+..
T Consensus 33 epmKel~~kyP~WLe~nk~~l~~Ed~-~RY~kQ~~lv~~I~~~fE~ 77 (126)
T 2wl8_A 33 PSLKEITEKYPEWLQSHRESLPPEQF-EKYQEQHSVMCKICEQFEA 77 (126)
T ss_dssp HHHHHHHTTHHHHHHHHGGGSCHHHH-HHHHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHhhHHHHhCcccCCHHHH-HHHHHHHHHHHHHHHHHcC
Confidence 56788889999999999877776663 3444444555555554444
No 128
>3f9m_A Glucokinase; hexokinase IV, ATP-binding, diabetes mellitus, mutation, glycolysis, nucleotide-binding, transfera; HET: GLC MRK; 1.50A {Homo sapiens} PDB: 3fgu_A* 3id8_A* 3idh_A* 3vev_A* 3vf6_A* 3qic_A* 3s41_A* 4dhy_A* 4dch_A* 3vey_A* 1v4s_A* 3a0i_X* 3fr0_A* 3goi_A* 3imx_A* 3h1v_X* 1v4t_A*
Probab=40.56 E-value=2.9e+02 Score=29.31 Aligned_cols=57 Identities=11% Similarity=0.034 Sum_probs=38.7
Q ss_pred CHHHHHHHHHHHHHcC---CcceeeecchHHHHHhccccccCCCCCCceEEEEEEeCCcceEEEEEE
Q 005222 149 TDLQRREYLNAASIAG---LRPLRLIHDCTATALGYGIYKTDFANGGKSYIAFVDIGHSDTQVSIVS 212 (708)
Q Consensus 149 ~~~qr~~l~~Aa~~AG---l~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~Gggt~dvsv~~ 212 (708)
...-.+.|++|.+.-| ++++.++|+.+|..++.+... +...+-+=+|-||=-+.+-+
T Consensus 183 G~DVv~lL~~al~r~g~~~v~v~AlvNDTVgTL~s~aY~~-------~~~~iGlI~GTGtNa~Y~E~ 242 (470)
T 3f9m_A 183 GNNVVGLLRDAIKRRGDFEMDVVAMVNDTVATMISCYYED-------HQCEVGMIVGTGCNACYMEE 242 (470)
T ss_dssp TSBHHHHHHHHHHHHCSCCCEEEEEECHHHHHHHHHHTTC-------TTEEEEEEESSSEEEEEEEE
T ss_pred CccHHHHHHHHHHhcCCCCCcEEEEEEcCHHHHHhcccCC-------CCceEEEEEecCCceEEeee
Confidence 3455788888988877 458889999999988765432 23444444687766554443
No 129
>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A
Probab=40.21 E-value=17 Score=36.83 Aligned_cols=68 Identities=19% Similarity=0.072 Sum_probs=38.6
Q ss_pred CHHHHHHHhhhhhH----HHHHHHHHHHHHcCCCCCCccEEEEecCCCChHHHHHHHHhHhCCCCC-----C-CCCchhh
Q 005222 299 KREEFEELASGLTE----KIAIPCRKALADAGLHVDKIHSVEIVGSGSRIPAITRLLTSLFGREPR-----R-SLNASEC 368 (708)
Q Consensus 299 tr~~fe~~~~~~~~----~i~~~i~~~l~~~~~~~~~i~~ViLvGG~srip~v~~~l~~~fg~~v~-----~-~~n~~ea 368 (708)
+.++.+++.+.+.+ .|.+.+.+++.+.++ ..|+.+||+ +++...+.+.+ ++. . +.+.+-+
T Consensus 244 ~~~~~~~lA~~~~~~q~~~I~~av~~v~~~~~~-----~~vv~aG~G---~~L~~~la~~~--~~~~~~~~i~~~~s~va 313 (334)
T 3cet_A 244 SEIDAENIAKNYYELWKELILENVENVAEKYGS-----KKVVITGLG---ENILKDALADF--EVISVAERYGKDVSLAT 313 (334)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-----CEEEEESTT---HHHHHHHTTTS--EEEEHHHHHCHHHHHSH
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-----CeEEEeCCc---HHHHHHHHhhC--CeeehhcccCccccccc
Confidence 56666666665544 444555555555433 379999987 46666655442 221 1 2234556
Q ss_pred HhchHHHH
Q 005222 369 VARGCALQ 376 (708)
Q Consensus 369 va~GAa~~ 376 (708)
-|+|+|++
T Consensus 314 pA~avA~l 321 (334)
T 3cet_A 314 PSFAVAEL 321 (334)
T ss_dssp HHHHHHHH
T ss_pred CHHHHHHH
Confidence 78888855
No 130
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=39.73 E-value=1.1e+02 Score=32.50 Aligned_cols=53 Identities=13% Similarity=0.021 Sum_probs=33.6
Q ss_pred CceEEEEEEeCCcceEEEEEEEeCCe---EEEEEEeCCCCc---chHHHHHHHHHHHHH
Q 005222 192 GKSYIAFVDIGHSDTQVSIVSFEAGH---MKVLSHAFDSSL---GGRDFDDVLFGYFAA 244 (708)
Q Consensus 192 ~~~~vlv~D~Gggt~dvsv~~~~~~~---~~v~~~~~~~~l---GG~~id~~l~~~l~~ 244 (708)
+...++.+|+||.++-+.++...+.. +......-...+ +|..+=..|++.+.+
T Consensus 59 E~G~~laiDlGGTnirv~lV~~~G~~~~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~ 117 (457)
T 2yhx_A 59 QAGSFLAIVMGGGDLEVILISLAGRQESSIXASRSLAAAMSTTAIPSDLWGNXAXSNAA 117 (457)
T ss_dssp CCEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCTTTTSCSCTHHHHHHHHHHHHH
T ss_pred ccceEEEEEeCCCeEEEEEEEeCCCeeEEEeeEEEEcCCccCCCCHHHHHHHHHHHHHH
Confidence 35568999999999999999987664 222222222232 556665555555543
No 131
>3f9m_A Glucokinase; hexokinase IV, ATP-binding, diabetes mellitus, mutation, glycolysis, nucleotide-binding, transfera; HET: GLC MRK; 1.50A {Homo sapiens} PDB: 3fgu_A* 3id8_A* 3idh_A* 3vev_A* 3vf6_A* 3qic_A* 3s41_A* 4dhy_A* 4dch_A* 3vey_A* 1v4s_A* 3a0i_X* 3fr0_A* 3goi_A* 3imx_A* 3h1v_X* 1v4t_A*
Probab=39.51 E-value=76 Score=33.87 Aligned_cols=52 Identities=19% Similarity=0.384 Sum_probs=33.3
Q ss_pred CceEEEEEEeCCcceEEEEEEEeCCe-----EEEEEEeCCCC----cchHHHHHHHHHHHHHHH
Q 005222 192 GKSYIAFVDIGHSDTQVSIVSFEAGH-----MKVLSHAFDSS----LGGRDFDDVLFGYFAAKF 246 (708)
Q Consensus 192 ~~~~vlv~D~Gggt~dvsv~~~~~~~-----~~v~~~~~~~~----lGG~~id~~l~~~l~~~~ 246 (708)
+...+|.+|+||.++-|..+++.++. +++....+..+ .| . ...|++|+.+.+
T Consensus 75 E~G~fLAlDlGGTNfRV~~V~L~g~~~~~~~~~~~~~~~~Ip~~l~~g-t--~~eLFd~IA~~i 135 (470)
T 3f9m_A 75 EVGDFLSLDLGGTNFRVMLVKVGEGEEGQWSVKTKHQMYSIPEDAMTG-T--AEMLFDYISECI 135 (470)
T ss_dssp CCEEEEEEEESSSEEEEEEEEEEC----CEEEEEEEEEEECCHHHHSS-B--HHHHHHHHHHHH
T ss_pred cceEEEEEEecCceEEEEEEEECCCCCCcceEEEEEEeecCChHhccC-C--HHHHHHHHHHHH
Confidence 35679999999999999999998643 55544433222 12 1 355666666543
No 132
>1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A*
Probab=39.27 E-value=31 Score=34.65 Aligned_cols=48 Identities=15% Similarity=0.099 Sum_probs=38.7
Q ss_pred hhhhHHHHHHHHHHHHHcCCCCCCccEEEEecCCCChHHHHHHHHhHhCCC
Q 005222 308 SGLTEKIAIPCRKALADAGLHVDKIHSVEIVGSGSRIPAITRLLTSLFGRE 358 (708)
Q Consensus 308 ~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~srip~v~~~l~~~fg~~ 358 (708)
......+...++++|+++++++++|+.|+.-|+++++ -+.+.+.||.+
T Consensus 214 ~~~~~~~~~~i~~aL~~agl~~~did~v~~H~~~~~~---~d~i~~~lg~~ 261 (317)
T 1hnj_A 214 KVAVTELAHIVDETLAANNLDRSQLDWLVPHQANLRI---ISATAKKLGMS 261 (317)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCGGGCCEEEECCSCHHH---HHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHcCCC
Confidence 3445577788999999999999999999999987765 45688888743
No 133
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=38.33 E-value=16 Score=36.22 Aligned_cols=49 Identities=10% Similarity=0.035 Sum_probs=31.3
Q ss_pred CccEEEEecCCCChHHHHHHHHhHhC------------CCCCCCCCchhhHhchHHHHHHH
Q 005222 331 KIHSVEIVGSGSRIPAITRLLTSLFG------------REPRRSLNASECVARGCALQCAM 379 (708)
Q Consensus 331 ~i~~ViLvGG~srip~v~~~l~~~fg------------~~v~~~~n~~eava~GAa~~a~~ 379 (708)
+++.|+|.||.+..|.+.+.+++.+. .++....-.+.+.++|||.++..
T Consensus 227 ~p~~IvlgG~i~~~~~~~~~l~~~l~~~~~~~~~~~~~~~i~~~~~~~~a~~~GAa~~~~~ 287 (292)
T 2gup_A 227 DPGVISLGGSISQNPDFIQGVKKAVEDFVDAYEEYTVAPVIQACTYHADANLYGALVNWLQ 287 (292)
T ss_dssp CCSEEEEESGGGGCHHHHHHHHHHHHHHHHHCTTCCSCCCEEECSCSTTHHHHHHHHHHHH
T ss_pred CCCEEEEeCccccchHHHHHHHHHHHHhhcccccccCCCeEEEcccCChhhHHHHHHHHHH
Confidence 34678898988766666665555441 12222334567899999988754
No 134
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=37.37 E-value=29 Score=34.26 Aligned_cols=46 Identities=15% Similarity=0.122 Sum_probs=31.4
Q ss_pred ccEEEEecCCCChHHHHHHHHhHhCC-------CCCCCCCchhhHhchHHHHH
Q 005222 332 IHSVEIVGSGSRIPAITRLLTSLFGR-------EPRRSLNASECVARGCALQC 377 (708)
Q Consensus 332 i~~ViLvGG~srip~v~~~l~~~fg~-------~v~~~~n~~eava~GAa~~a 377 (708)
++.|+|.||.+..|.+.+.+++.+.. ++....-.+.+.++|||.++
T Consensus 234 p~~ivlgG~~~~~~~~~~~l~~~l~~~~~~~~~~i~~~~~~~~a~~~GAa~l~ 286 (289)
T 2aa4_A 234 CQCVVVGGSVGLAEGYLALVETYLAQEPAAFHVDLLAAHYRHDAGLLGAALLA 286 (289)
T ss_dssp CSEEEEEHHHHTSTTHHHHHHHHHTTSCGGGCCEEEECSCSSCHHHHHHHHHH
T ss_pred CCEEEEeCcccccHHHHHHHHHHHHHhcCccCCEEEECCCCCchHHHHHHHHH
Confidence 45788888877667777777777642 12223345668999999876
No 135
>2a01_A Apolipoprotein A-I; four-helix bundle, lipid transport; HET: AC9; 2.40A {Homo sapiens} PDB: 3k2s_A* 1av1_A 3j00_0*
Probab=35.75 E-value=90 Score=30.01 Aligned_cols=83 Identities=17% Similarity=0.154 Sum_probs=50.1
Q ss_pred chhHHHHHHHhhhHHHHHHHHHHHhhh---hhc---cCCCHHHHHHHHHHHHHHHHHhhcCCCCcCHHHHHHHHHHHHHh
Q 005222 591 DITMEQTKDKKNALESYVYEMRNKLFS---TYR---SFASDQEREGISRSLQETEEWLYDDGDDETANTYASKLEDLKKL 664 (708)
Q Consensus 591 D~~~~~~~~a~N~LEs~iy~~r~~l~~---~~~---~~~~~~e~~~l~~~l~e~~~WL~~~~~~a~~~~~~~kl~~L~~~ 664 (708)
++.....++.+..|.-|.-.+|+++.. +++ ....++-+.++...++++.+||...-+ .-...+....++|+..
T Consensus 128 ~~~~~~~eel~~~L~p~~eelr~kl~~~veelk~~l~P~~ee~r~kl~~~~~el~~~l~p~~~-e~~~kl~~~~e~lr~~ 206 (243)
T 2a01_A 128 EGARQKLHELQEKLSPLGEEMRDRARAHVDALRTHLAPYSDELRQRLAARLEALKENGGARLA-EYHAKATEHLSTLSEK 206 (243)
T ss_dssp HHHHHHHHHHCCSCCSSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT-SSSCCHHHHHHHHHHH
T ss_pred HHHHhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhcchhHH-HHHHHHHHHHHHHHHH
Confidence 444445556666666666666666643 222 223466678888888888888865422 2223445567777777
Q ss_pred HHHHHHHHHh
Q 005222 665 VDPIENRYKD 674 (708)
Q Consensus 665 ~~pi~~R~~e 674 (708)
..|....+++
T Consensus 207 l~p~~e~lk~ 216 (243)
T 2a01_A 207 AKPALEDLRQ 216 (243)
T ss_dssp HHHHHHHSSS
T ss_pred hHHHHHHHHH
Confidence 7777765554
No 136
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=35.41 E-value=21 Score=35.30 Aligned_cols=43 Identities=16% Similarity=0.100 Sum_probs=29.3
Q ss_pred cCCcceeeecchHHHHHhccccccCCCCCCceEEEEEEeCCcceEEEEE
Q 005222 163 AGLRPLRLIHDCTATALGYGIYKTDFANGGKSYIAFVDIGHSDTQVSIV 211 (708)
Q Consensus 163 AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~Gggt~dvsv~ 211 (708)
.|++ +.+.|+..|+|++....... ... .++++-+|.| .-.+++
T Consensus 96 ~~~p-v~v~NDa~aaa~~e~~~g~~---~~~-~~v~l~~GtG-iG~gii 138 (289)
T 2aa4_A 96 TNLP-TIAINDAQAAAWAEFQALDG---DIT-DMVFITVSTG-VGGGVV 138 (289)
T ss_dssp HCSC-EEEEEHHHHHHHHHHHTSCT---TCC-CEEEEEESSS-EEEEEE
T ss_pred HCCC-EEEechHHHHHHHHHHhCCC---CCc-eEEEEEeCcc-EEEEEE
Confidence 4765 68999999999875433211 223 7888999988 555555
No 137
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=34.95 E-value=23 Score=35.19 Aligned_cols=67 Identities=7% Similarity=-0.103 Sum_probs=41.4
Q ss_pred HhhhhhHHHHHHHHHHHHHcCCCCC-CccEEEEecCCCCh--HHHHHHHHhHhCCCCCCCCCchhhHhchHHHHHHH
Q 005222 306 LASGLTEKIAIPCRKALADAGLHVD-KIHSVEIVGSGSRI--PAITRLLTSLFGREPRRSLNASECVARGCALQCAM 379 (708)
Q Consensus 306 ~~~~~~~~i~~~i~~~l~~~~~~~~-~i~~ViLvGG~sri--p~v~~~l~~~fg~~v~~~~n~~eava~GAa~~a~~ 379 (708)
.+..++++....+-..+ . +..- +.+.|+|.||-++. +.+++.+++.. .++ ..|..+...||+.++..
T Consensus 211 ~A~~i~~~~~~~La~~i-~--~~~~~~p~~vvlgGGv~~~~~~~l~~~l~~~~-~~i---~~~~~a~~~GA~~la~~ 280 (291)
T 1zbs_A 211 AVYSLVQNSFDDFLVRN-V--LRYNRPDLPLHFIGSVAFHYREVLSSVIKKRG-LTL---GSVLQSPMEGLIQYHHN 280 (291)
T ss_dssp HHHHHHHHHHHHHHHHH-T--GGGCCTTSCEEEESHHHHHTHHHHHHHHHHTT-CCE---EEEESCSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH-h--cccCCCCceEEEECchHHhhHHHHHHHHHHcC-Cee---cccCcCHHHHHHHHHHh
Confidence 34455555555555555 2 2222 56789999998765 66666665543 122 23567889999998864
No 138
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=34.54 E-value=72 Score=31.85 Aligned_cols=48 Identities=13% Similarity=0.100 Sum_probs=32.1
Q ss_pred CccEEEEecCCCCh-----HHHHHHHHhHhCC-------CCCCCCCchhhHhchHHHHHH
Q 005222 331 KIHSVEIVGSGSRI-----PAITRLLTSLFGR-------EPRRSLNASECVARGCALQCA 378 (708)
Q Consensus 331 ~i~~ViLvGG~sri-----p~v~~~l~~~fg~-------~v~~~~n~~eava~GAa~~a~ 378 (708)
+++.|+|-||.+.. +.+++.+++++.. ++....-.+.+.++|||.++.
T Consensus 239 dP~~IvlgG~v~~~~~~~~~~l~~~l~~~~~~~~~~~~~~i~~s~lg~~ag~~GAa~la~ 298 (310)
T 3htv_A 239 DPDAVILGGGVMDMPAFPRETLVAMTQKYLRRPLPHQVVRFIAASSSDFNGAQGAAILAH 298 (310)
T ss_dssp CCSEEEEECTTTTSTTCCHHHHHHHHHHTSCTTTTTTTCEEEECCCCTTHHHHHHHHHHH
T ss_pred CCCEEEEeCchhccchhHHHHHHHHHHHHhhcccccCCcEEEEcCCCCcHHHHHHHHHHH
Confidence 45778888887765 4677777776521 112222356889999998875
No 139
>3khy_A Propionate kinase; csgid, IDP01739, ATP-binding, nucleotide-binding, transferase, structural genomics; 1.98A {Francisella tularensis subsp}
Probab=34.11 E-value=1.3e+02 Score=31.03 Aligned_cols=25 Identities=16% Similarity=0.250 Sum_probs=22.2
Q ss_pred CccEEEEecCCC-ChHHHHHHHHhHh
Q 005222 331 KIHSVEIVGSGS-RIPAITRLLTSLF 355 (708)
Q Consensus 331 ~i~~ViLvGG~s-rip~v~~~l~~~f 355 (708)
.+|.|+++||-+ +.+.+++.+.+.+
T Consensus 313 gvDaIVFTgGIgEns~~iR~~i~~~l 338 (384)
T 3khy_A 313 KLDALVFTGGIGENAANIRKNIISKL 338 (384)
T ss_dssp SCCEEEEEHHHHHHCHHHHHHHHHHT
T ss_pred CCCEEEECCccccCcHHHHHHHHhhc
Confidence 699999999988 7799999998776
No 140
>1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2
Probab=32.60 E-value=40 Score=33.81 Aligned_cols=47 Identities=17% Similarity=0.116 Sum_probs=37.6
Q ss_pred hhhHHHHHHHHHHHHHcCCCCCCccEEEEecCCCChHHHHHHHHhHhCCC
Q 005222 309 GLTEKIAIPCRKALADAGLHVDKIHSVEIVGSGSRIPAITRLLTSLFGRE 358 (708)
Q Consensus 309 ~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~srip~v~~~l~~~fg~~ 358 (708)
-....+...++++|+++++++++|+.|++-|++.++ -+.+.+.||.+
T Consensus 217 ~~~~~~~~~i~~al~~agl~~~did~~~~H~~~~~~---~d~~~~~lg~~ 263 (322)
T 1ub7_A 217 FAVRVMNTATLEAIEKAGLTPEDIRLFVPHQANLRI---IDAARERLGLP 263 (322)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGCSEEEECCSCHHH---HHHHHHTTTCC
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHcCCC
Confidence 345677788999999999999999999999987664 34677888743
No 141
>1woq_A Inorganic polyphosphate/ATP-glucomannokinase; transferase; HET: BGC; 1.80A {Arthrobacter SP} SCOP: c.55.1.10 c.55.1.10
Probab=32.47 E-value=32 Score=33.61 Aligned_cols=45 Identities=20% Similarity=0.367 Sum_probs=28.7
Q ss_pred cCCcceeeecchHHHHHhccccccCCCCCCceEEEEEEeCCcceEEEEE
Q 005222 163 AGLRPLRLIHDCTATALGYGIYKTDFANGGKSYIAFVDIGHSDTQVSIV 211 (708)
Q Consensus 163 AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~Gggt~dvsv~ 211 (708)
.|++ +.+.|+..|+|++....... ......++++-+|.| .-.+++
T Consensus 114 ~~~p-V~v~NDanaaalaE~~~g~~--~~~~~~~~~l~~GtG-IG~giv 158 (267)
T 1woq_A 114 LGRP-VEVINDADAAGLAEARYGAG--AGVKGTVLVITLGTG-IGSAFI 158 (267)
T ss_dssp HTSC-EEEEEHHHHHHHHHHHHSTT--TTCCSEEEEEEESSS-EEEEEE
T ss_pred HCCC-EEEeehhHHHHHHHHHhCCC--CCCCCcEEEEEECcc-eEEEEE
Confidence 3675 78999999999875433211 011235777788876 666654
No 142
>2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus}
Probab=32.09 E-value=45 Score=33.17 Aligned_cols=45 Identities=20% Similarity=0.291 Sum_probs=36.8
Q ss_pred hhHHHHHHHHHHHHHcCCCCCCccEEEEecCCCChHHHHHHHHhHhCC
Q 005222 310 LTEKIAIPCRKALADAGLHVDKIHSVEIVGSGSRIPAITRLLTSLFGR 357 (708)
Q Consensus 310 ~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~srip~v~~~l~~~fg~ 357 (708)
....+...++++|+++++++++|+.|++-|+++++ -+.+.+.||.
T Consensus 208 ~~~~~~~~i~~al~~agl~~~did~~~~H~~~~~~---~~~~~~~lg~ 252 (309)
T 2ebd_A 208 AVRSMEEVCREVLEKAGVKPEEVSLVIPHQANVRI---INALAEKLNI 252 (309)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCSEEEECCSCHHH---HHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHhCC
Confidence 45567788999999999999999999999988765 3467788874
No 143
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=31.93 E-value=27 Score=36.29 Aligned_cols=48 Identities=8% Similarity=0.017 Sum_probs=32.9
Q ss_pred CccEEEEecCCCChHH-HHHHHHhHhCC--C--CCCCCCchhhHhchHHHHHH
Q 005222 331 KIHSVEIVGSGSRIPA-ITRLLTSLFGR--E--PRRSLNASECVARGCALQCA 378 (708)
Q Consensus 331 ~i~~ViLvGG~srip~-v~~~l~~~fg~--~--v~~~~n~~eava~GAa~~a~ 378 (708)
+++.|+|.||.+..+. +.+.+.+.+.. + +......+.+.++||+..+.
T Consensus 295 ~p~~IvlgGgi~~~~~~l~~~i~~~l~~~~~~~i~~~~~~~~a~~~GAa~l~~ 347 (381)
T 1saz_A 295 EVDFIVLTGGLAHEKEFLVPWITKRVSFIAPVLVFPGSNEEKALALSALRVLR 347 (381)
T ss_dssp CCSEEEEEEGGGGCTTTHHHHHHHHHTTTSCEEEEEBCCHHHHHHHHHHHHHT
T ss_pred CCCEEEEeCcCccChHHHHHHHHHHHHhhcCeEEEecCcchhHHHHHHHHHHc
Confidence 5788999999876543 77778777742 2 22233334689999998764
No 144
>3hm8_A Hexokinase-3; glucose, glucose-6-phosphate, non-protein kinase, structural genomics consortium, SGC, A enzyme, ATP-binding, glycolysis; HET: GLC BG6; 2.80A {Homo sapiens}
Probab=31.82 E-value=1.5e+02 Score=31.30 Aligned_cols=34 Identities=18% Similarity=0.406 Sum_probs=26.4
Q ss_pred CceEEEEEEeCCcceEEEEEEEeCCeEEEEEEeCC
Q 005222 192 GKSYIAFVDIGHSDTQVSIVSFEAGHMKVLSHAFD 226 (708)
Q Consensus 192 ~~~~vlv~D~Gggt~dvsv~~~~~~~~~v~~~~~~ 226 (708)
+...+|.+|+||.++-|.++++.++ +++....+.
T Consensus 57 E~G~~LAlDlGGTn~RV~~V~l~g~-~~~~~~~~~ 90 (445)
T 3hm8_A 57 ERGDFLALDLGGTNFRVLLVRVTTG-VQITSEIYS 90 (445)
T ss_dssp CCEEEEEEEESSSSEEEEEEEESSS-EEEEEEEEC
T ss_pred eeeEEEEEEecCCeEEEEEEEECCc-eEEEEEEec
Confidence 4467999999999999999999766 555544433
No 145
>2h3g_X Biosynthetic protein; pantothenate kinase, anthrax, type III pantothenate kinase, COAX, COAA, askha; 2.00A {Bacillus anthracis str}
Probab=31.68 E-value=29 Score=34.16 Aligned_cols=20 Identities=25% Similarity=0.516 Sum_probs=17.6
Q ss_pred EEEEEccccceEEEEEeCCc
Q 005222 3 VVGFDIGNENCVIATVKHRG 22 (708)
Q Consensus 3 vvGID~GTt~s~va~~~~~~ 22 (708)
++.||.|+|+++.++++++.
T Consensus 2 lL~IDIGNT~ik~gl~~~~~ 21 (268)
T 2h3g_X 2 IFVLDVGNTNAVLGVFEEGE 21 (268)
T ss_dssp EEEEEECSSEEEEEEEETTE
T ss_pred EEEEEECcCcEEEEEEECCE
Confidence 68899999999999998664
No 146
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=31.59 E-value=11 Score=37.70 Aligned_cols=45 Identities=7% Similarity=-0.062 Sum_probs=28.5
Q ss_pred CcceEEEEecCCCCHHHHHHHHHHHH-HcCC-cceeeecchHHHHHhc
Q 005222 136 PVVDCVIGVPSYFTDLQRREYLNAAS-IAGL-RPLRLIHDCTATALGY 181 (708)
Q Consensus 136 ~~~~~VitVPa~~~~~qr~~l~~Aa~-~AGl-~~~~li~Ep~Aaal~y 181 (708)
.+..+.|++|..- ......+++..+ ..++ ..+.+.|+..||+++-
T Consensus 59 ~i~~igig~pG~~-~~~~~~l~~~l~~~~~~~~pv~v~NDa~~aa~ge 105 (291)
T 1zbs_A 59 SIRAVYFYGAGCT-PAKAPMLNEALDSMLPHCDRIEVAGDMLGAARAL 105 (291)
T ss_dssp TCCEEEEEETTCC-TTTHHHHHHHHHHHSTTCSEEEEECHHHHHHHHH
T ss_pred cccEEEEECCCCC-hHHHHHHHHHHHHhcCCCCcEEEeCcHHHHHHhh
Confidence 3556888888864 222223444443 3454 3688999999999863
No 147
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=30.56 E-value=28 Score=34.83 Aligned_cols=51 Identities=18% Similarity=0.279 Sum_probs=31.9
Q ss_pred HHHHHHHHHHcCCcceeeecchHHHHHhccccccCCCCCCceEEEEEEeCCcceEEEEE
Q 005222 153 RREYLNAASIAGLRPLRLIHDCTATALGYGIYKTDFANGGKSYIAFVDIGHSDTQVSIV 211 (708)
Q Consensus 153 r~~l~~Aa~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~Gggt~dvsv~ 211 (708)
++.+.+. .|++ +.+.|+..|+|++-...... ...++++++-+|-| .-.+++
T Consensus 90 ~~~l~~~---~~~p-V~v~NDanaaalaE~~~G~~---~~~~~~~~l~~GtG-iG~gii 140 (302)
T 3epq_A 90 LQTVXNE---MXIP-VGFSTDVNAAALGEFLFGEA---XGLDSCLYITIGTG-IGAGAI 140 (302)
T ss_dssp HHHHHHH---HCSC-EEEEEHHHHHHHHHHHHSTT---TTCSCEEEEEESSS-EEEEEE
T ss_pred HHHHHHH---hCCC-EEEechhHHHHHHHHHhCCC---CCCCcEEEEEECCc-eEEEEE
Confidence 4444443 3776 68999999999875443211 23456788888865 445554
No 148
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5
Probab=30.02 E-value=22 Score=35.26 Aligned_cols=68 Identities=12% Similarity=-0.049 Sum_probs=37.7
Q ss_pred hhhhhHHHHHHHHHHHHHcCCCCCCccEEEEecCCCChHHHHHHHHhHhCCCCCCCCCchhhHhchHHHHHH
Q 005222 307 ASGLTEKIAIPCRKALADAGLHVDKIHSVEIVGSGSRIPAITRLLTSLFGREPRRSLNASECVARGCALQCA 378 (708)
Q Consensus 307 ~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~srip~v~~~l~~~fg~~v~~~~n~~eava~GAa~~a~ 378 (708)
+..++++....+-..+ ...+ ..+...|+|.||-+.. +.+.|++.+..+......+..+.++||++++.
T Consensus 210 A~~i~~~~~~~La~~i-~~~~-~~~p~~vvlgGGv~~~--l~~~l~~~l~~~~~~i~~~~~a~~~GAa~la~ 277 (291)
T 1zxo_A 210 IRQLVMNSFIAFFRRN-VMQY-DYKQYPVHFIGSIAYC--YKEILQDAARQTGIQIGKILQSPMEGLIQYHS 277 (291)
T ss_dssp TTHHHHHHHHHHHTTT-GGGS-CTTTSCEEECSHHHHH--THHHHHHHTTTTTCCEEEECSCTHHHHHTTSS
T ss_pred HHHHHHHHHHHHHHHH-hccc-CCCCceEEEECcHHHH--HHHHHHHHHhcCCcEEeecCCCHHHHHHHHHH
Confidence 3345555555555555 2221 1145678888887765 55666666643211112345678899987763
No 149
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=29.79 E-value=5.1e+02 Score=30.80 Aligned_cols=15 Identities=13% Similarity=0.098 Sum_probs=7.4
Q ss_pred HHHHHHHHHHHHHcC
Q 005222 150 DLQRREYLNAASIAG 164 (708)
Q Consensus 150 ~~qr~~l~~Aa~~AG 164 (708)
...+..|+--|..+|
T Consensus 171 e~~K~i~~yla~~~~ 185 (1080)
T 2dfs_A 171 VSAKYAMRYFATVSG 185 (1080)
T ss_dssp HHHHHHHHHHHHTTT
T ss_pred chHHHHHHHHHhhcc
Confidence 344555555555444
No 150
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A*
Probab=29.44 E-value=25 Score=39.00 Aligned_cols=25 Identities=36% Similarity=0.569 Sum_probs=22.7
Q ss_pred ccEEEEecCCCChHHHHHHHHhHhC
Q 005222 332 IHSVEIVGSGSRIPAITRLLTSLFG 356 (708)
Q Consensus 332 i~~ViLvGG~srip~v~~~l~~~fg 356 (708)
.+.|++|||++.+|.+.-.|.+++.
T Consensus 501 y~nilivGggski~g~~~~L~dri~ 525 (655)
T 4am6_A 501 YSNILIVGGSSKIPALDFILTDRIN 525 (655)
T ss_dssp HTCEEEESTTCCCTTHHHHHHHHHH
T ss_pred hhcEEEEcCcccCccHHHHHHHHHH
Confidence 3689999999999999999999985
No 151
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=28.36 E-value=96 Score=30.81 Aligned_cols=21 Identities=19% Similarity=0.254 Sum_probs=18.1
Q ss_pred CeEEEEEccccceEEEEEeCC
Q 005222 1 MSVVGFDIGNENCVIATVKHR 21 (708)
Q Consensus 1 M~vvGID~GTt~s~va~~~~~ 21 (708)
|.++|||+|.|++++++++..
T Consensus 3 ~~~lgiDiGgt~i~~~l~d~~ 23 (302)
T 3epq_A 3 AMLGGIEAGGTXFVCAVGRED 23 (302)
T ss_dssp CCEEEEEECSSEEEEEEECTT
T ss_pred cEEEEEEECcceeEEEEEECC
Confidence 568999999999999988643
No 152
>1msz_A DNA-binding protein smubp-2; R3H fold; NMR {Homo sapiens} SCOP: d.68.7.1
Probab=28.21 E-value=37 Score=26.95 Aligned_cols=28 Identities=21% Similarity=0.250 Sum_probs=25.8
Q ss_pred EEEEecCCCCHHHHHHHHHHHHHcCCcc
Q 005222 140 CVIGVPSYFTDLQRREYLNAASIAGLRP 167 (708)
Q Consensus 140 ~VitVPa~~~~~qr~~l~~Aa~~AGl~~ 167 (708)
-.++.|+.++..+|..+-..|+..||..
T Consensus 34 ~~l~FP~sLs~~eR~~IH~lA~~~GL~h 61 (86)
T 1msz_A 34 MQLEFPPSLNSHDRLRVHQIAEEHGLRH 61 (86)
T ss_dssp SEEEECTTCCSHHHHHHHHHHHHTTEEE
T ss_pred cEEEcCCCCCHHHHHHHHHHHHHcCCCc
Confidence 5889999999999999999999999864
No 153
>2f9w_A Pantothenate kinase; COAA, transferase; HET: PAU; 1.90A {Pseudomonas aeruginosa} SCOP: c.55.1.13 c.55.1.13 PDB: 2f9t_A*
Probab=27.98 E-value=42 Score=33.05 Aligned_cols=21 Identities=14% Similarity=0.202 Sum_probs=17.9
Q ss_pred eEEEEEccccceEEEEEe-CCc
Q 005222 2 SVVGFDIGNENCVIATVK-HRG 22 (708)
Q Consensus 2 ~vvGID~GTt~s~va~~~-~~~ 22 (708)
..+.||.|+|+++.+++. ++.
T Consensus 24 M~L~IDiGNT~ik~g~~~~~~~ 45 (271)
T 2f9w_A 24 MILELDCGNSLIKWRVIEGAAR 45 (271)
T ss_dssp EEEEEEECSSCEEEEEEETTTE
T ss_pred cEEEEEeCCCeeEEEEEeCCCE
Confidence 479999999999999987 443
No 154
>1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A
Probab=27.92 E-value=60 Score=32.29 Aligned_cols=47 Identities=15% Similarity=0.075 Sum_probs=37.1
Q ss_pred hhhHHHHHHHHHHHHHcCCCCCCccEEEEecCCCChHHHHHHHHhHhCCC
Q 005222 309 GLTEKIAIPCRKALADAGLHVDKIHSVEIVGSGSRIPAITRLLTSLFGRE 358 (708)
Q Consensus 309 ~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~srip~v~~~l~~~fg~~ 358 (708)
.....+...++++|+++++++++|+.|++-++++++ -+.+.+.||.+
T Consensus 209 ~~~~~~~~~i~~al~~agl~~~did~~~~H~~~~~~---~d~~~~~lg~~ 255 (313)
T 1zow_A 209 FAVRIMGDASTRVVEKANLTSDDIDLFIPHQANIRI---MESARERLGIS 255 (313)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGCSEEEECCSCHHH---HHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHhCCC
Confidence 345677788999999999999999999999887654 34567778743
No 155
>2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa}
Probab=27.54 E-value=63 Score=32.55 Aligned_cols=46 Identities=13% Similarity=0.232 Sum_probs=36.9
Q ss_pred hhHHHHHHHHHHHHHcCCCCCCccEEEEecCCCChHHHHHHHHhHhCCC
Q 005222 310 LTEKIAIPCRKALADAGLHVDKIHSVEIVGSGSRIPAITRLLTSLFGRE 358 (708)
Q Consensus 310 ~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~srip~v~~~l~~~fg~~ 358 (708)
....+...++++|+++++++++|+.|++-+++.++ -+.+.+.||.+
T Consensus 222 ~~~~~~~~i~~aL~~agl~~~did~~~~H~~~~~~---~d~~~~~lg~~ 267 (331)
T 2x3e_A 222 AVTQMSDSVRRVLDRVGWQASDLHHLVPHQANTRI---LAAVADQLDLP 267 (331)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCSEEEECCCCHHH---HHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHcCCC
Confidence 45667788999999999999999999999888764 34577778743
No 156
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=27.25 E-value=95 Score=31.97 Aligned_cols=72 Identities=13% Similarity=0.058 Sum_probs=0.0
Q ss_pred HHHHHHhhhhhHHHHHHHHHHHHHcCCCCCCccEEEEecCCCCh-HHHHHHHHhHh--------CCCCCCCCCchhhHhc
Q 005222 301 EEFEELASGLTEKIAIPCRKALADAGLHVDKIHSVEIVGSGSRI-PAITRLLTSLF--------GREPRRSLNASECVAR 371 (708)
Q Consensus 301 ~~fe~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~sri-p~v~~~l~~~f--------g~~v~~~~n~~eava~ 371 (708)
..-.++++.....+...+..++.-. +++.|+|.||.+.. |.+.+.+++.+ ..++....-.+.+.++
T Consensus 289 ~~a~~~l~~~~~~La~~i~~l~~~l-----dP~~IvlgG~~~~~~~~l~~~l~~~l~~~~~~~~~~~i~~s~~~~~a~~~ 363 (380)
T 2hoe_A 289 VRVKEYFDDIARYFSIGLLNLIHLF-----GISKIVIGGFFKELGENFLKKIKIEVETHLLYKHSVDMSFSKVQEPVIAF 363 (380)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH-----CCCEEEEEEGGGGGHHHHHHHHHHHHHHHCSSSCCCEEEECCCCSCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh-----CCCEEEEcCchhhhhHHHHHHHHHHHHHhcCCCCCcEEEEcCCCCcHHHH
Q ss_pred hHHHHH
Q 005222 372 GCALQC 377 (708)
Q Consensus 372 GAa~~a 377 (708)
|||.++
T Consensus 364 GAa~l~ 369 (380)
T 2hoe_A 364 GAAVHA 369 (380)
T ss_dssp HHHHHH
T ss_pred HHHHHH
No 157
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=27.11 E-value=47 Score=34.47 Aligned_cols=20 Identities=5% Similarity=0.263 Sum_probs=17.8
Q ss_pred eEEEEEccccceEEEEEeCC
Q 005222 2 SVVGFDIGNENCVIATVKHR 21 (708)
Q Consensus 2 ~vvGID~GTt~s~va~~~~~ 21 (708)
.++|||+|.|++++++++.+
T Consensus 3 ~vlgidiGgt~ik~al~d~~ 22 (381)
T 1saz_A 3 RILTINPGSTSTKLSIFEDE 22 (381)
T ss_dssp EEEEEEECSSEEEEEEEETT
T ss_pred eEEEEECCccceeEEEEecc
Confidence 48999999999999998754
No 158
>3bex_A Type III pantothenate kinase; actin-like fold, ATP-binding, coenzyme A biosynthesis, cytoplasm, metal-binding, nucleotide-binding, potassium; HET: PAU; 1.51A {Thermotoga maritima} SCOP: c.55.1.13 c.55.1.13 PDB: 3bf1_A* 3bf3_A* 2gtd_A
Probab=26.94 E-value=1.6e+02 Score=28.24 Aligned_cols=61 Identities=10% Similarity=0.058 Sum_probs=32.6
Q ss_pred CcceEEEEecCCCCHHHHHHHHHHHHH-cCCccee----------eecch-------HHHHHhccccccCCCCCCceEEE
Q 005222 136 PVVDCVIGVPSYFTDLQRREYLNAASI-AGLRPLR----------LIHDC-------TATALGYGIYKTDFANGGKSYIA 197 (708)
Q Consensus 136 ~~~~~VitVPa~~~~~qr~~l~~Aa~~-AGl~~~~----------li~Ep-------~Aaal~y~~~~~~~~~~~~~~vl 197 (708)
.+..++|+.|. +.....++.+++. .+..++. ....| .|+|++..... +..++
T Consensus 56 ~i~~i~IsSVv---p~~~~~~~~~~~~~~~~~p~~v~~~~~gl~~~y~~P~~lG~DR~~~~~aa~~~~-------~~~~i 125 (249)
T 3bex_A 56 EIKGIGVASVV---PTQNTVIERFSQKYFHISPIWVKAKNGCVKWNVKNPSEVGADRVANVVAFVKEY-------GKNGI 125 (249)
T ss_dssp GEEEEEEEESC---HHHHHHHHHHHHHHHSCCCEECCCCSSSSEECSSCGGGSCHHHHHHHHHHHHHT-------CSCEE
T ss_pred cCCEEEEEcCc---HHHHHHHHHHHHHhcCCCeEEEEccCCCceeccCChhhcCHHHHHHHHHHHHHc-------CCCEE
Confidence 46778898775 4455555555543 3443222 12222 24444322111 35799
Q ss_pred EEEeCCcce
Q 005222 198 FVDIGHSDT 206 (708)
Q Consensus 198 v~D~Gggt~ 206 (708)
|+|+|-.+|
T Consensus 126 VvD~GTA~T 134 (249)
T 3bex_A 126 IIDMGTATT 134 (249)
T ss_dssp EEEESSEEE
T ss_pred EEEcCCceE
Confidence 999997644
No 159
>3lay_A Zinc resistance-associated protein; salmonella typhimurium L structural genomics, center for structural genomics of INFE diseases; 2.70A {Salmonella enterica subsp}
Probab=26.70 E-value=3.6e+02 Score=24.36 Aligned_cols=66 Identities=20% Similarity=0.164 Sum_probs=35.8
Q ss_pred CCCCHHHHHHHHHHHHHHhhcchhHHHHHHHhhhHHHHHHHHHHHhhhhhccCCCHHHHHHHHHHHHHHHHHhhc
Q 005222 570 GGMTKPELALAQETENLLAQQDITMEQTKDKKNALESYVYEMRNKLFSTYRSFASDQEREGISRSLQETEEWLYD 644 (708)
Q Consensus 570 ~~ls~~e~~~~~~~~~~~~~~D~~~~~~~~a~N~LEs~iy~~r~~l~~~~~~~~~~~e~~~l~~~l~e~~~WL~~ 644 (708)
..||+++.+++++-..++..+ +.+.+.++-+.-.+++..+ ..+...++...++.+.+.+.+..|..
T Consensus 66 LnLT~EQq~ql~~I~~e~r~~------~~~Lr~ql~akr~EL~aL~---~a~~~DeakI~aL~~Ei~~Lr~qL~~ 131 (175)
T 3lay_A 66 SPLTTEQQATAQKIYDDYYTQ------TSALRQQLISKRYEYNALL---TASSPDTAKINAVAKEMESLGQKLDE 131 (175)
T ss_dssp --CCHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHH---TSSSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHH---hCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 359999988887765555432 2222223222222333333 23556677777777777777766654
No 160
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5
Probab=26.55 E-value=6.5 Score=39.31 Aligned_cols=44 Identities=11% Similarity=-0.052 Sum_probs=25.0
Q ss_pred cceEEEEecCCCCHHHHHHHHHHHH-HcCC-cceeeecchHHHHHhc
Q 005222 137 VVDCVIGVPSYFTDLQRREYLNAAS-IAGL-RPLRLIHDCTATALGY 181 (708)
Q Consensus 137 ~~~~VitVPa~~~~~qr~~l~~Aa~-~AGl-~~~~li~Ep~Aaal~y 181 (708)
+..+.|++|..- ......+++..+ ..++ ..+.+.|+..||+++-
T Consensus 58 i~~igig~pG~~-~~~~~~l~~~l~~~~~~~~pv~v~NDa~~aalge 103 (291)
T 1zxo_A 58 FNAVYFYGAGCT-PEKAPVLRRAIADSLPVIGNIKANSDMLAAAHGL 103 (291)
T ss_dssp ---CEEECTTCC-TTTTHHHHHHHHHHSCCCSCCEEECSHHHHHHHT
T ss_pred ccEEEEEcCCCC-HHHHHHHHHHHHHhcCCCceEEEECcHHHHHHhh
Confidence 345777888753 211123443333 3454 3688999999999854
No 161
>1kae_A HDH, histidinol dehydrogenase; L-histidinol dehydrogenase, homodimer, rossman fold, 4 domai L-histidine biosynthesis, NAD cofactor; HET: HSO NAD; 1.70A {Escherichia coli} SCOP: c.82.1.2 PDB: 1k75_A* 1kah_A* 1kar_A
Probab=26.54 E-value=83 Score=32.91 Aligned_cols=44 Identities=25% Similarity=0.360 Sum_probs=35.8
Q ss_pred cceEEEEecCCCCHHHHHHHHHHHHHcCCcceeeecchHH-HHHhcccc
Q 005222 137 VVDCVIGVPSYFTDLQRREYLNAASIAGLRPLRLIHDCTA-TALGYGIY 184 (708)
Q Consensus 137 ~~~~VitVPa~~~~~qr~~l~~Aa~~AGl~~~~li~Ep~A-aal~y~~~ 184 (708)
+.++|++.|+.-+ -.++-||.++|.+.+.-+--.-| ||++||..
T Consensus 154 V~~Iv~~tPp~i~----p~iL~AA~l~Gv~eIy~vGGAQAIAAlAyGTe 198 (434)
T 1kae_A 154 CKKVVLCSPPPIA----DEILYAAQLCGVQDVFNVGGAQAIAALAFGTE 198 (434)
T ss_dssp CSEEEEEECSSCC----HHHHHHHHHTTCCEEEECCHHHHHHHHHHCCS
T ss_pred CCeEEEECCCCCC----HHHHHHHHHcCCCEEeecccHHHHHHHHcCCC
Confidence 6789999998322 46889999999999998888887 47899864
No 162
>1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2
Probab=25.92 E-value=61 Score=32.78 Aligned_cols=46 Identities=24% Similarity=0.282 Sum_probs=37.0
Q ss_pred hhHHHHHHHHHHHHHcCCCCCCccEEEEecCCCChHHHHHHHHhHhCCC
Q 005222 310 LTEKIAIPCRKALADAGLHVDKIHSVEIVGSGSRIPAITRLLTSLFGRE 358 (708)
Q Consensus 310 ~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~srip~v~~~l~~~fg~~ 358 (708)
....+...++++|+++++++++|+.|+.-|++.++ -+.+.+.||.+
T Consensus 229 ~~~~~~~~i~~aL~~agl~~~did~v~~H~~~~~~---~d~i~~~lg~~ 274 (339)
T 1mzj_A 229 AVADVVPAAREALEVAGLTVGDLVAFVPHQANLRI---IDVLVDRLGVP 274 (339)
T ss_dssp HHHHHHHHHHHHHHTTTCCGGGCSEEEECCSCHHH---HHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEECCCCHHH---HHHHHHHhCCC
Confidence 45667788999999999999999999999887764 34677788743
No 163
>1gs9_A Apolipoprotein E, APOE4; lipid transport, heparin-binding, plasma, lipid binding protein; 1.7A {Homo sapiens} SCOP: a.24.1.1 PDB: 1or3_A 1or2_A 1le4_A 1bz4_A 1lpe_A 1le2_A
Probab=25.15 E-value=2.9e+02 Score=24.69 Aligned_cols=62 Identities=13% Similarity=0.088 Sum_probs=31.1
Q ss_pred CCCCHHHHHHHHHHHHHHhhcchhHHHHHHHhhhHHHHHHHHHHHhhhhhccCCCHHHHHHHHHHHHHH
Q 005222 570 GGMTKPELALAQETENLLAQQDITMEQTKDKKNALESYVYEMRNKLFSTYRSFASDQEREGISRSLQET 638 (708)
Q Consensus 570 ~~ls~~e~~~~~~~~~~~~~~D~~~~~~~~a~N~LEs~iy~~r~~l~~~~~~~~~~~e~~~l~~~l~e~ 638 (708)
.|++.+-..++.+....+. .+.....++.|..|+-|+-.+|..+.. -.++=|.++.-.+.++
T Consensus 83 ~P~t~el~~~l~~~~e~Lr--~~L~~d~EelR~~l~p~~~el~~~l~~-----~~EelR~kl~P~~eeL 144 (165)
T 1gs9_A 83 TPVAEETRARLSKELQAAQ--ARLGADMEDVRGRLVQYRGEVQAMLGQ-----STEELRVRLASHLRKL 144 (165)
T ss_dssp CCCCSHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHTSTTC-----CCHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHH
Confidence 4566555555555554442 344444555555555555555555432 2344445555555444
No 164
>3uul_A Utrophin; spectrin repeat, structural protein, cytoskeletal, helical bundle; 1.95A {Rattus norvegicus} PDB: 3uum_A
Probab=24.73 E-value=2.8e+02 Score=22.39 Aligned_cols=20 Identities=0% Similarity=0.039 Sum_probs=9.6
Q ss_pred HHHHhhhHHHHHHHHHHHhh
Q 005222 597 TKDKKNALESYVYEMRNKLF 616 (708)
Q Consensus 597 ~~~a~N~LEs~iy~~r~~l~ 616 (708)
...+.++|.+.|-.+...|.
T Consensus 7 f~~~l~el~~WL~e~e~~l~ 26 (118)
T 3uul_A 7 YQIALEEVLTWLLSAEDTFQ 26 (118)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 33444555555555444443
No 165
>3zyy_X Iron-sulfur cluster binding protein; iron-sulfur-binding protein, ashka family, ATPase; 2.20A {Carboxydothermus hydrogenoformans}
Probab=24.39 E-value=1e+02 Score=34.26 Aligned_cols=57 Identities=23% Similarity=0.236 Sum_probs=44.5
Q ss_pred EEEeCHHHHHHHhhhhhHHHHHHHHHHHHHcCCCCCCccEEEEecCCCChHHHHHHHH
Q 005222 295 RGFIKREEFEELASGLTEKIAIPCRKALADAGLHVDKIHSVEIVGSGSRIPAITRLLT 352 (708)
Q Consensus 295 ~~~itr~~fe~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~srip~v~~~l~ 352 (708)
.+.||..+++++.. --.-+..-++-.|+++|++.++|+.|+|.||++.-=-+.+++.
T Consensus 499 ~i~itq~DIr~~ql-AKaAi~agi~~Ll~~~gi~~~di~~v~lAGaFG~~l~~~~a~~ 555 (631)
T 3zyy_X 499 DIVITEADIQNLIR-AKAAIFAGVRTMLAMVDLPLEAIDRVIIAGGFGKYLNIKDAIT 555 (631)
T ss_dssp CEEEEHHHHHHHHH-HHHHHHHHHHHHHHHTTCCGGGCCEEEEESSSCSEEEHHHHHH
T ss_pred cEEEeHHHHHHHHH-HHHHHHHHHHHHHHHcCCCHHHccEEEEeccccccCCHHHHhh
Confidence 46799999987643 2334556677788899999999999999999988766666664
No 166
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=23.76 E-value=42 Score=34.07 Aligned_cols=44 Identities=16% Similarity=0.133 Sum_probs=28.7
Q ss_pred cCCcceeeecchHHHHHhccccccCCCCCCceEEEEEEeCCcceEEEEE
Q 005222 163 AGLRPLRLIHDCTATALGYGIYKTDFANGGKSYIAFVDIGHSDTQVSIV 211 (708)
Q Consensus 163 AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~Gggt~dvsv~ 211 (708)
.|++ +.+.|+..|+|++....... .....++++-+|.| .-.+++
T Consensus 131 ~~~p-v~v~NDa~aaal~E~~~g~~---~~~~~~v~i~~GtG-iG~gii 174 (343)
T 2yhw_A 131 LHLP-VWVDNDGNCAALAERKFGQG---KGLENFVTLITGTG-IGGGII 174 (343)
T ss_dssp HCSC-EEEEEHHHHHHHHHHHTSTT---TTCSCEEEEEESSS-EEEEEE
T ss_pred HCCC-EEEechhHHHHHHHHHhCCC---CCCCcEEEEEECCC-EEEEEE
Confidence 3665 68899999999875432211 22456788888877 455554
No 167
>1g99_A Acetate kinase; alpha/beta, askha (acetate and sugar kinases, HSC70, actin) superfamily, conserved epsilon conformation; HET: ADP; 2.50A {Methanosarcina thermophila} SCOP: c.55.1.2 c.55.1.2 PDB: 1tuu_A* 1tuy_A*
Probab=22.96 E-value=47 Score=34.67 Aligned_cols=45 Identities=9% Similarity=-0.059 Sum_probs=33.4
Q ss_pred hhhhhHHHHHHHHHHHHHcCCCCCCccEEEEecCCC-ChHHHHHHHHhHh
Q 005222 307 ASGLTEKIAIPCRKALADAGLHVDKIHSVEIVGSGS-RIPAITRLLTSLF 355 (708)
Q Consensus 307 ~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s-rip~v~~~l~~~f 355 (708)
++-+..++.+.|-......| .+|.|+++||-+ +.+.|++.+.+.+
T Consensus 302 ~d~f~yri~k~IGa~~a~Lg----gvDaiVFTgGIGEns~~vR~~i~~~l 347 (408)
T 1g99_A 302 LEIFAYKVKKFIGEYSAVLN----GADAVVFTAGIGENSASIRKRILTGL 347 (408)
T ss_dssp HHHHHHHHHHHHHHHHHHTT----SCSEEEEEHHHHHHCHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHhhC----CCCEEEECccccccCHHHHHHHHhhh
Confidence 34455566666655554432 699999999999 9999999998765
No 168
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3
Probab=22.90 E-value=2.4e+02 Score=29.82 Aligned_cols=24 Identities=21% Similarity=0.336 Sum_probs=21.3
Q ss_pred CceEEEEEEeCCcceEEEEEEEeC
Q 005222 192 GKSYIAFVDIGHSDTQVSIVSFEA 215 (708)
Q Consensus 192 ~~~~vlv~D~Gggt~dvsv~~~~~ 215 (708)
....++.+|+||.++-+.++...+
T Consensus 66 E~G~~lalDlGGTn~Rv~~V~l~G 89 (451)
T 1bdg_A 66 ETGNFLALDLGGTNYRVLSVTLEG 89 (451)
T ss_dssp CCEEEEEEEESSSSEEEEEEEECC
T ss_pred ccceEEEEEeCCCeEEEEEEecCC
Confidence 346789999999999999999976
No 169
>4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans}
Probab=22.37 E-value=88 Score=31.52 Aligned_cols=48 Identities=17% Similarity=0.097 Sum_probs=38.6
Q ss_pred hhhhHHHHHHHHHHHHHcCCCCCCccEEEEecCCCChHHHHHHHHhHhCCC
Q 005222 308 SGLTEKIAIPCRKALADAGLHVDKIHSVEIVGSGSRIPAITRLLTSLFGRE 358 (708)
Q Consensus 308 ~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~srip~v~~~l~~~fg~~ 358 (708)
+..++.+...++++|+++++++++|+.+++-.++.+ +-+.+.+.+|.+
T Consensus 230 ~~~~~~~~~~i~~~l~~~gl~~~did~~~~Hq~~~~---i~~~~~~~lgl~ 277 (333)
T 4dfe_A 230 KLAVNVLEKVAVEALEKANLSAEQIDWLIPHQANIR---IMQSTCRKLGLP 277 (333)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCGGGCSEEEECCSCHH---HHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHH---HHHHHHHHhCCC
Confidence 445567778899999999999999999999988765 447777778754
No 170
>2q2r_A Glucokinase 1, putative; ATPase hexose kinase family, transferase; HET: BGC ADP; 2.10A {Trypanosoma cruzi}
Probab=22.13 E-value=50 Score=34.00 Aligned_cols=20 Identities=15% Similarity=0.144 Sum_probs=17.3
Q ss_pred CeEEEEEccccceEEEEEeC
Q 005222 1 MSVVGFDIGNENCVIATVKH 20 (708)
Q Consensus 1 M~vvGID~GTt~s~va~~~~ 20 (708)
|.++|||+|.|++++++++.
T Consensus 29 ~~~lgiDiGgt~i~~~l~d~ 48 (373)
T 2q2r_A 29 PLTFVGDVGGTSARMGFVRE 48 (373)
T ss_dssp CEEEEEEECSSEEEEEEEEE
T ss_pred CeEEEEEEccccEEEEEEec
Confidence 46899999999999998764
No 171
>3zyy_X Iron-sulfur cluster binding protein; iron-sulfur-binding protein, ashka family, ATPase; 2.20A {Carboxydothermus hydrogenoformans}
Probab=21.44 E-value=2.5e+02 Score=31.10 Aligned_cols=41 Identities=10% Similarity=0.114 Sum_probs=31.9
Q ss_pred hhhhhHHHHHHHHHHHHHcCCCCCCccEEEEecCCCChHHH
Q 005222 307 ASGLTEKIAIPCRKALADAGLHVDKIHSVEIVGSGSRIPAI 347 (708)
Q Consensus 307 ~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~srip~v 347 (708)
-+-+++.+..++.+++.++++++++|..+.++|-.+..-.+
T Consensus 265 ~~~v~~~in~li~~l~~~~~i~~~~I~~~~v~GNt~M~hLl 305 (631)
T 3zyy_X 265 RKAVLSTINELIFQLCKEHGVEKKEIMAAVVAGNTTMTHLF 305 (631)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCGGGEEEEEEEECHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHeeEEEEEccHHHHHHH
Confidence 33456777788888999999999999999999976544433
No 172
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705}
Probab=21.41 E-value=4.1e+02 Score=26.73 Aligned_cols=69 Identities=19% Similarity=0.199 Sum_probs=47.3
Q ss_pred CceEEEEEEeCCcceEEEEEEEe-CCeEEEEEEe-CCCCcchHHHHHHHHHHHHHHHHHhhcccccCCHHHHHHHHHHHH
Q 005222 192 GKSYIAFVDIGHSDTQVSIVSFE-AGHMKVLSHA-FDSSLGGRDFDDVLFGYFAAKFKEQYKINVYSNVRACIRLRAACE 269 (708)
Q Consensus 192 ~~~~vlv~D~Gggt~dvsv~~~~-~~~~~v~~~~-~~~~lGG~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~~e 269 (708)
....+.++|+|..++-+.|+++. ++.++++... ....+|-. ++. .-.-++.++.|++.+..
T Consensus 14 ~~~~~A~IDiGSNsiRL~I~~~~~~~~~~~i~~~k~~vrLg~g-~~~----------------~g~ls~eai~r~~~aL~ 76 (343)
T 3cer_A 14 ESVTVAGIDCGTNSIRLKIARVDADGMHEVVPRILRVIRLGQD-VDK----------------THRFADEALERAYVAAR 76 (343)
T ss_dssp CCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEEECCCTTTT-HHH----------------HSSCCHHHHHHHHHHHH
T ss_pred CCCeEEEEEcccceeEeEEEEEcCCCCEEEEEEEEEEeeCCCC-ccc----------------cCCcCHHHHHHHHHHHH
Confidence 45679999999999999999998 4567666543 33455532 221 01235678888888888
Q ss_pred HhhhhcCC
Q 005222 270 KLKKVLSA 277 (708)
Q Consensus 270 ~~K~~Ls~ 277 (708)
+.+..+..
T Consensus 77 ~f~~~~~~ 84 (343)
T 3cer_A 77 EFAGVIAE 84 (343)
T ss_dssp HHHHHHTT
T ss_pred HHHHHHHH
Confidence 88877753
No 173
>1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A
Probab=21.32 E-value=90 Score=31.31 Aligned_cols=45 Identities=27% Similarity=0.262 Sum_probs=36.2
Q ss_pred hhHHHHHHHHHHHHHcCCCCCCccEEEEecCCCChHHHHHHHHhHhCC
Q 005222 310 LTEKIAIPCRKALADAGLHVDKIHSVEIVGSGSRIPAITRLLTSLFGR 357 (708)
Q Consensus 310 ~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~srip~v~~~l~~~fg~ 357 (708)
....+...++++|+++++++++|+.+++-++++++ -+.+.+.||.
T Consensus 230 ~~~~~~~~i~~al~~agl~~~dId~~~~H~~~~~~---~~~~~~~lg~ 274 (335)
T 1u6e_A 230 AAFKMGDVGRRAMDAAGVRPDQIDVFVPHQANSRI---NELLVKNLQL 274 (335)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCCEEEECCSCHHH---HHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEECCCCHHH---HHHHHHHcCC
Confidence 45677788999999999999999999999988765 3346677774
No 174
>3nuw_A 2-OXO-3-deoxygalactonate kinase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.09A {Klebsiella pneumoniae} PDB: 3r1x_A*
Probab=21.31 E-value=64 Score=32.10 Aligned_cols=44 Identities=14% Similarity=0.247 Sum_probs=32.2
Q ss_pred cEEEEecCCCChHHHHHHHHhHhCCCCCCCCCchhhHhchHHHHHH
Q 005222 333 HSVEIVGSGSRIPAITRLLTSLFGREPRRSLNASECVARGCALQCA 378 (708)
Q Consensus 333 ~~ViLvGG~srip~v~~~l~~~fg~~v~~~~n~~eava~GAa~~a~ 378 (708)
..|.|+|........+..|.. +|.++ ...++++++..|....+.
T Consensus 248 ~~v~LiG~~~L~~~Y~~AL~~-~G~~~-~~~d~~~~~~~GL~~~~~ 291 (295)
T 3nuw_A 248 QAISLVAGSSLTSRYQQAFAA-IGREV-SAVAGDTAFQTGIRSIAY 291 (295)
T ss_dssp SCEEEEECHHHHHHHHHHHHH-TTCCE-EEEEHHHHHHHHHHHHHH
T ss_pred CeEEEEeCHHHHHHHHHHHHH-cCCCc-eecCHHHHHHHHHHHHHH
Confidence 469999999888888888864 67654 334788998888765443
No 175
>4ewp_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; transferase; 2.20A {Micrococcus luteus nctc 2665}
Probab=21.24 E-value=1.3e+02 Score=30.32 Aligned_cols=45 Identities=22% Similarity=0.280 Sum_probs=37.1
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEEecCCC--ChHHHHHHHHhHhCCC
Q 005222 314 IAIPCRKALADAGLHVDKIHSVEIVGSGS--RIPAITRLLTSLFGRE 358 (708)
Q Consensus 314 i~~~i~~~l~~~~~~~~~i~~ViLvGG~s--rip~v~~~l~~~fg~~ 358 (708)
..+..+++|+++|+++++|+.|+++.-+. .+|...-+|.+.+|.+
T Consensus 66 a~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~v~~~LGl~ 112 (350)
T 4ewp_A 66 AVGAAREALERAGLQGSDLDAVIVSTVTFPHATPSAAALVAHEIGAT 112 (350)
T ss_dssp HHHHHHHHHHHTTCCGGGCSEEEEECSCCSCSSSCHHHHHHHHTTCT
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCCchHHHHHHHhCCC
Confidence 45677899999999999999998776554 4799999999999853
No 176
>4gic_A HDH, histidinol dehydrogenase; protein structure initiative, STR genomics, PSI-biology, NEW YORK structural genomics researc consortium; 2.05A {Methylococcus capsulatus}
Probab=21.06 E-value=89 Score=32.57 Aligned_cols=75 Identities=24% Similarity=0.254 Sum_probs=48.7
Q ss_pred cceEEEEecCCCCHHHHHHHHHHHHHcCCcceeeecchHH-HHHhcccccc---CCCCCCc-e----------EEEEEEe
Q 005222 137 VVDCVIGVPSYFTDLQRREYLNAASIAGLRPLRLIHDCTA-TALGYGIYKT---DFANGGK-S----------YIAFVDI 201 (708)
Q Consensus 137 ~~~~VitVPa~~~~~qr~~l~~Aa~~AGl~~~~li~Ep~A-aal~y~~~~~---~~~~~~~-~----------~vlv~D~ 201 (708)
+.++|++.|+. ...---.++-||.++|.+.+.-+--.-| ||++||...- +....++ . ..+-+|+
T Consensus 160 V~~Iv~~tPp~-~G~i~p~iL~AA~l~Gv~eIy~vGGAQAIAAlAyGTetI~~VDkIvGPGN~yVa~AKr~v~g~VgIDm 238 (423)
T 4gic_A 160 VPELIMAVPAP-RGELNALVLAAAYISGVDRVFRIGGAQAVAALAYGTETVPRVDKIVGPGNIYVATAKKLVFGQVGIDM 238 (423)
T ss_dssp CSEEEEECCCG-GGCCCHHHHHHHHHHTCCEEECCCHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHHHHHHBTTBEECC
T ss_pred CCeEEEecCCC-CCCccHHHHHHHHhcCCcEEEEcCChhhhhhhccCCCcccceeEEecCCcHHHHHHHHHhcCCcCccc
Confidence 66899999983 2122346889999999999888888877 4688986431 0000010 0 1145788
Q ss_pred CCcceEEEEEE
Q 005222 202 GHSDTQVSIVS 212 (708)
Q Consensus 202 Gggt~dvsv~~ 212 (708)
=+|-+.+.|+.
T Consensus 239 ~AGPSEilViA 249 (423)
T 4gic_A 239 VAGPSEILVIS 249 (423)
T ss_dssp CCCCCEEEEEE
T ss_pred ccccceEEEEe
Confidence 88887776653
No 177
>1gmj_A ATPase inhibitor; coiled-coil structure, P dependent oligomerization, ATP hydrolysis; 2.2A {Bos taurus} SCOP: h.4.8.1 PDB: 1ohh_H* 1hf9_A
Probab=20.73 E-value=3e+02 Score=21.56 Aligned_cols=24 Identities=17% Similarity=0.073 Sum_probs=10.3
Q ss_pred HHHHHhhhHHHHHHHHHHHHHHHH
Q 005222 669 ENRYKDGEARAQATRDLLQCIVEY 692 (708)
Q Consensus 669 ~~R~~e~~~rp~~~~~l~~~l~~~ 692 (708)
.....+-+...++|+..++.|..+
T Consensus 54 ~~h~~ei~~le~~i~rhk~~i~~l 77 (84)
T 1gmj_A 54 SHHAKEIERLQKEIERHKQSIKKL 77 (84)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHh
Confidence 333333344444444444444443
No 178
>3nmd_A CGMP dependent protein kinase; leucine zipper, coiled-coil, structural genomics, berkeley S genomics center, BSGC, dimerization; HET: MSE; 2.27A {Homo sapiens}
Probab=20.50 E-value=2.1e+02 Score=21.69 Aligned_cols=42 Identities=17% Similarity=0.246 Sum_probs=27.4
Q ss_pred HHHHHHHHHHHhHHHHHHHHHhhhHHHHHHHHHHHHHHHHHH
Q 005222 653 TYASKLEDLKKLVDPIENRYKDGEARAQATRDLLQCIVEYRT 694 (708)
Q Consensus 653 ~~~~kl~~L~~~~~pi~~R~~e~~~rp~~~~~l~~~l~~~~~ 694 (708)
.++.|.++|+..-.-|...-.+-..+...|..|+..|..++.
T Consensus 27 ~L~~K~eELr~kd~~I~eLEk~L~ekd~eI~~LqseLDKfrS 68 (72)
T 3nmd_A 27 ALQEKIEELRQRDALIDELELELDQKDELIQMLQNELDKYRS 68 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 345566666666656666666666677777788877776654
No 179
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=20.46 E-value=61 Score=32.40 Aligned_cols=20 Identities=20% Similarity=0.312 Sum_probs=17.3
Q ss_pred eEEEEEccccceEEEEEeCC
Q 005222 2 SVVGFDIGNENCVIATVKHR 21 (708)
Q Consensus 2 ~vvGID~GTt~s~va~~~~~ 21 (708)
.++|||+|.|++++++++..
T Consensus 8 ~~lgiDiGgt~i~~~l~d~~ 27 (310)
T 3htv_A 8 VVAGVDMGATHIRFCLRTAE 27 (310)
T ss_dssp EEEEEEECSSEEEEEEEETT
T ss_pred EEEEEEeCCCEEEEEEECCC
Confidence 58999999999999987643
No 180
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=20.30 E-value=1.7e+02 Score=29.47 Aligned_cols=20 Identities=30% Similarity=0.488 Sum_probs=17.2
Q ss_pred eEEEEEccccceEEEEEeCC
Q 005222 2 SVVGFDIGNENCVIATVKHR 21 (708)
Q Consensus 2 ~vvGID~GTt~s~va~~~~~ 21 (708)
.++|||+|+|++++++++..
T Consensus 31 ~~lgiDiGgt~i~~~l~d~~ 50 (343)
T 2yhw_A 31 SALAVDLGGTNLRVAIVSMK 50 (343)
T ss_dssp EEEEEEECSSEEEEEEEETT
T ss_pred EEEEEEECCCEEEEEEECCC
Confidence 58999999999999988643
Done!