BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005223
(707 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P87137|YDM6_SCHPO Uncharacterized protein C57A7.06 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC57A7.06 PE=1 SV=1
Length = 929
Score = 146 bits (368), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 121/354 (34%), Positives = 191/354 (53%), Gaps = 35/354 (9%)
Query: 233 APLPKPEQEKLERKVVYEQSKKDITKWEPLVKMNREAPSIYFD-EDTNLGFSTVGAIAAG 291
APL K Q++LER+ YEQ+K D+ KW+P+V NR++ + F +T + +A+
Sbjct: 325 APLAKSIQDRLERQAAYEQTKNDLEKWKPIVADNRKSDQLIFPMNETARPVPSNNGLASS 384
Query: 292 FEPRTEFEKKMASLVNDDKVKEAHKQDGSKLLELNKISVEDYLEERNHVAKMRSLLFRHE 351
FEPRTE E+KM + D ++ + L LNK+SVE+ E + MR L+FR E
Sbjct: 385 FEPRTESERKMHQALLDAGLENESALKKQEELALNKLSVEEVAERTRQLRFMRELMFREE 444
Query: 352 MKRKRIKKIKSKTYHRLLKKDRLKAASVEMLMDPEAAKE---EARKQEFKRAEERMTLKH 408
K KR+ KIKSKTY ++ K + K EM + P++ ++ E K E RA ERMT +H
Sbjct: 445 RKAKRVAKIKSKTYRKIRKNRKEK----EMALIPKSEEDLENERIKSEEARALERMTQRH 500
Query: 409 KNSSRWAKRILKRGLDAQDEGTRAAITEQLQQHALLTRKMKSMKDSSSSDDSSDEDDVDE 468
KN+S W +++L+R + EGTR A+ EQ+++ L +++ + S D +DV E
Sbjct: 501 KNTSSWTRKMLERA--SHGEGTREAVNEQIRKGDELMQRIHGKEIS-----EMDGEDVSE 553
Query: 469 NSAGSDQDRASKLYATAKEKTLKVLAEDDEVPESGVLSLPFMVRGMKKRKEEAIQEANAA 528
S SD D ++ +TA EK + ++E GVL + FM R R++ +Q+
Sbjct: 554 FS-DSDYDTNEQV-STAFEK----IRNEEEPKLKGVLGMKFM-RDASNRQKALVQD---E 603
Query: 529 LQEYESSLKKL--------EGTGGEENLKEGAASGRRVFGPVKR--EVLVPSKK 572
+Q +E L + +G G + G +GRR F P + ++ +PS+K
Sbjct: 604 MQAFEDELAGVPNEDDTSQKGEDGVPGVLIGNNTGRRSFKPSEEAAKLSLPSRK 657
>sp|Q04500|UTP14_YEAST U3 small nucleolar RNA-associated protein 14 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=UTP14 PE=1
SV=1
Length = 899
Score = 125 bits (313), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 106/380 (27%), Positives = 192/380 (50%), Gaps = 47/380 (12%)
Query: 195 GNGQISIDDLLEPLQGKSGYSKLRKRMHQMRKKSTSVLAPLPKPEQEKLERKVVYEQSKK 254
+G++S+ D++ + + ++ + + ++ KS++ PLP+ Q++ +RK YE S++
Sbjct: 238 ASGKLSLTDMMNVIDDR----QVIENANLLKGKSSTYEVPLPQRIQQRHDRKAAYEISRQ 293
Query: 255 DITKWEPLVKMNREAPSIYFDEDTNLGFSTVGAIAAGFE-----PRTEFEKKMASLVNDD 309
+++KW +V+ NR A + F L T A+ F P+TE ++K+ ++ +
Sbjct: 294 EVSKWNDIVQQNRRADHLIFP----LNKPTEHNHASAFTRTQDVPQTELQEKVDQVLQES 349
Query: 310 KVKEAHKQDGSKLLELNKISVEDYLEERNHVAKMRSLLFRHEMKRKRIKKIKSKTYHRLL 369
+ K + L K++ E+ + + MR L+FR E K +R+KKIKSKTY ++
Sbjct: 350 NLANPEKDSKFEELSTAKMTPEEMRKRTTEMRLMRELMFREERKARRLKKIKSKTYRKIK 409
Query: 370 KKDRLKAASVEMLMDPEAAKEEARKQEFKRAEERMTLKHKNSSRWAKRILKRGLDAQDEG 429
KK+ +K + + ++ E+ + RA+ERMTLKHK +S+WAK ++K G+ D
Sbjct: 410 KKELMKNRELAAV----SSDEDNEDHDIARAKERMTLKHKTNSKWAKDMIKHGM-TNDAE 464
Query: 430 TRAAITEQLQQHALLTRKMKSMKDSSSSDDSSDEDDVDENSAGSDQDRASKLYATAKEKT 489
TR + E L+Q L KM +D NS + R L E+
Sbjct: 465 TREEMEEMLRQGERLKAKM-----------------LDRNSDDEEDGRVQTLSDVENEEK 507
Query: 490 LKVLAE--DDEVPESGVLSLPFMVRGMKKRKEEAIQEANAALQEYESS--LKKLEG---- 541
+ +E ++ ++GV+++ FM G + R+ EA +E L+ E+ +K E
Sbjct: 508 ENIDSEALKSKLGKTGVMNMAFMKNG-EAREREANKETLRQLRAVENGDDIKLFESDEEE 566
Query: 542 TGGEENLKEGAASGRRVFGP 561
T G EN++ GRR++ P
Sbjct: 567 TNG-ENIQ--INKGRRIYTP 583
>sp|Q3T0Q8|UT14A_BOVIN U3 small nucleolar RNA-associated protein 14 homolog A OS=Bos
taurus GN=UTP14A PE=2 SV=1
Length = 770
Score = 121 bits (303), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 101/318 (31%), Positives = 182/318 (57%), Gaps = 23/318 (7%)
Query: 144 DGDNDE--RHLRMLQGVTGMPSEFFEGKKKKKNVVISEAYPE-SEFNPTRDVLDGNGQ-I 199
+GD DE +H ++L+ ++ + GK ++K SEA + SEF+ + + G+G+ +
Sbjct: 35 EGDKDEERKHQKLLESISSL-----NGKDRQKLADRSEASLKVSEFSVSSE---GSGEKL 86
Query: 200 SIDDLLEPLQGKSGYSKLRKRMHQMRKKSTSVLAPLPKPEQEKLERKVVYEQSKKDITKW 259
+ DLLEP++ S + ++K++++++ K T L PL + E E++ R+V + +S + ++KW
Sbjct: 87 VLSDLLEPVKTSSSLAAVKKQLNRVKSKKTVEL-PLHREEIERIHREVAFNKSSQILSKW 145
Query: 260 EPLVKMNREAPSIYFD-EDTNLGFSTVGAIAAGFEPRTEFEKKMASLVNDDK--VKEAHK 316
+P+V NR+A + F F+ + + G++ T E+++ +L++ +K V +
Sbjct: 146 DPVVLKNRQAEQLVFPLSKPQSAFAPIEHVVNGWKAGTPLEQEIFNLLHKNKQPVTDPLL 205
Query: 317 QDGSKLLELNKISVEDYLEERNHVAKMRSLLFRHEMKRKRIKKIKSKTYHRLLKKDRLKA 376
K L +S+E+ R + + R+L +E + +R K+IKSK YHR+LKK + K
Sbjct: 206 TPVEKA-SLKAMSLEEVKMRRAELQRARALQSYYEARARREKRIKSKKYHRILKKGKAKQ 264
Query: 377 A--SVEML--MDPEAAKEEARKQEFKRAEERMTLKHKNSSRWAKRILKRGLDAQDEGTRA 432
A E L ++P AA EE K + R ERM+LKH+NS +WAK K + D R
Sbjct: 265 ALKDFEKLQKVNPAAALEELEKLDKARMMERMSLKHQNSGKWAKS--KAIMAKYDLEARQ 322
Query: 433 AITEQLQQHALLTRKMKS 450
A+ EQL ++ LT+K+++
Sbjct: 323 AMQEQLARNKELTQKVRA 340
>sp|Q6EJB6|UT14B_MOUSE U3 small nucleolar RNA-associated protein 14 homolog B OS=Mus
musculus GN=Utp14b PE=1 SV=2
Length = 756
Score = 100 bits (250), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 109/381 (28%), Positives = 194/381 (50%), Gaps = 43/381 (11%)
Query: 144 DGDNDERHLRMLQGVTGMPSEFFEGKKKKKNVV-ISEAYPE-SEFNPTRDVLDGNGQ-IS 200
D D + + ++L+ V+ + G+K K + SEA SEFN T + G+G+ +
Sbjct: 36 DSDGEGKRQKLLEAVSSL------GRKNKWKLAERSEASRMVSEFNVTSE---GSGEKLV 86
Query: 201 IDDLLEPLQGKSGYSKLRKRMHQMRKKSTSVLAPLPKPEQEKLERKVVYEQSKKDITKWE 260
+ DLL S + ++K++H R KS ++ PL K E ++ R+ + ++ + +++W+
Sbjct: 87 LSDLLGSATALSSVAAVKKQLH--RVKSKTLTPPLNKEEADRALREAAFSKTSQMLSRWD 144
Query: 261 PLVKMNREAPSIYFD-EDTNLGFSTVGAIAAGFEPRTEFEKKMASLVNDDKVKEAHKQDG 319
P+V NR+A + F E + + + ++ RT E+++ +L++ +K +
Sbjct: 145 PVVLKNRQAEQLIFPMEKEPPAVAPIEHVFTDWKVRTPLEQEVFNLLHKNK-----QPVT 199
Query: 320 SKLL------ELNKISVEDYLEERNHVAKMRSLLFRHEMKRKRIKKIKSKTYHRLLKKDR 373
LL + +S+E+ R + +MR+L +E + +R K+IKSK YHR LKK +
Sbjct: 200 DPLLTPVETASIRAMSLEEAKIRRAELQRMRALQSYYEARARREKRIKSKKYHRALKKGK 259
Query: 374 LKAASV---EMLMD-PEAAKEEARKQEFKRAEERMTLKHKNSSRWAKRILKRGLDAQDEG 429
K A E+ D P AA +E K E R ERM+LKH+ S +WAK K + D
Sbjct: 260 AKKALKEFEELWKDCPNAALQELEKMEKARMTERMSLKHQGSGKWAKS--KAIMAKYDPE 317
Query: 430 TRAAITEQLQQHALLTRKMKSMKDSSSSDDSSDE---------DDVDENSAGSDQDRASK 480
R A+ EQL ++ LT+K++ + +S D ++E DD+ N+ G + S
Sbjct: 318 ARKAMQEQLAKNRELTQKLQVVSESEEEDGCTEEGIVSVSHGMDDLQMNADGVNPWMLSS 377
Query: 481 LYATAKEKTLKVLAEDDEVPE 501
+ AK +K + +++PE
Sbjct: 378 CNSNAKRGEIKT--DPEQMPE 396
>sp|Q9BVJ6|UT14A_HUMAN U3 small nucleolar RNA-associated protein 14 homolog A OS=Homo
sapiens GN=UTP14A PE=1 SV=1
Length = 771
Score = 99.4 bits (246), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 103/317 (32%), Positives = 182/317 (57%), Gaps = 23/317 (7%)
Query: 144 DGDND--ERHLRMLQGVTGMPSEFFEGKKKKKNVVISEAYPE-SEFNPTRDVLDGNGQ-I 199
+GDND +H ++L+ ++ + +GK ++K SEA + SEFN + +G+G+ +
Sbjct: 34 EGDNDGERKHQKLLEAISSL-----DGKNRRKLAERSEASLKVSEFNVSS---EGSGEKL 85
Query: 200 SIDDLLEPLQGKSGYSKLRKRMHQMRKKSTSVLAPLPKPEQEKLERKVVYEQSKKDITKW 259
+ DLLEP++ S + ++K++ +++ K T L PL K E E++ R+V + ++ + ++KW
Sbjct: 86 VLADLLEPVKTSSSLATVKKQLSRVKSKKTVEL-PLNKEEIERIHREVAFNKTAQVLSKW 144
Query: 260 EPLVKMNREAPSIYFD-EDTNLGFSTVGAIAAGFEPRTEFEKKMASLVNDDK--VKEAHK 316
+P+V NR+A + F E + + + +G++ RT E+++ +L++ +K V +
Sbjct: 145 DPVVLKNRQAEQLVFPLEKEEPAIAPIEHVLSGWKARTPLEQEIFNLLHKNKQPVTDPLL 204
Query: 317 QDGSKLLELNKISVEDYLEERNHVAKMRSLLFRHEMKRKRIKKIKSKTYHRLLKKDRLKA 376
K L +S+E+ R + + R+L +E K +R KKIKSK YH+++KK + K
Sbjct: 205 TPVEK-ASLRAMSLEEAKMRRAELQRARALQSYYEAKARREKKIKSKKYHKVVKKGKAKK 263
Query: 377 ASVEM----LMDPEAAKEEARKQEFKRAEERMTLKHKNSSRWAKRILKRGLDAQDEGTRA 432
A E ++P AA EE K E R ERM+LKH+NS +WAK K + D R
Sbjct: 264 ALKEFEQLRKVNPAAALEELEKIEKARMMERMSLKHQNSGKWAKS--KAIMAKYDLEARQ 321
Query: 433 AITEQLQQHALLTRKMK 449
A+ EQL ++ LT+K++
Sbjct: 322 AMQEQLSKNKELTQKLQ 338
>sp|Q640M1|UT14A_MOUSE U3 small nucleolar RNA-associated protein 14 homolog A OS=Mus
musculus GN=Utp14a PE=2 SV=1
Length = 767
Score = 93.6 bits (231), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 115/380 (30%), Positives = 207/380 (54%), Gaps = 27/380 (7%)
Query: 144 DGDNDERHLRMLQGVTGMPSEFFEGKKKKKNVVISEA-YPESEFNPTRDVLDGNGQ-ISI 201
D D + +H ++L+ + + GK + K SEA SEFN + + G+G+ +++
Sbjct: 36 DSDGERKHQKLLEAIGSL-----SGKNRWKLPERSEAGLKVSEFNVSSE---GSGEKLAL 87
Query: 202 DDLLEPLQGKSGYSKLRKRMHQMRKKSTSVLAPLPKPEQEKLERKVVYEQSKKDITKWEP 261
DLL PL+ S + ++K++ +++ K T L PL K E E++ R+V + ++ + ++KW+
Sbjct: 88 SDLLGPLKPSSSLAAVKKQLSRVKSKKTLEL-PLHKREVEQIHREVAFSKTSQTLSKWDS 146
Query: 262 LVKMNREAPSIYFD-EDTNLGFSTVGAIAAGFEPRTEFEKKMASLVNDDK--VKEAHKQD 318
+V+ NREA + F E F+ + + ++ RT E+++ +L++ +K V +
Sbjct: 147 VVQKNREAEQLVFPLEKEPSSFAPMEHVFREWKARTPLEQEVFNLLHKNKQPVTDPLLTP 206
Query: 319 GSKLLELNKISVEDYLEERNHVAKMRSLLFRHEMKRKRIKKIKSKTYHRLLKKDRLKAAS 378
K L +S+E+ R + + R+L +E + +R+KKIKSK YH+++KK + K A
Sbjct: 207 VEKA-SLKAMSLEEAKIRRAELQRARALQSYYEARARRMKKIKSKKYHKIVKKGKAKKAL 265
Query: 379 --VEML--MDPEAAKEEARKQEFKRAEERMTLKHKNSSRWAKRILKRGLDAQDEGTRAAI 434
E L +DP+AA EE K E R ERM+LKH+NS +WAK K + D R A+
Sbjct: 266 KDFEQLRKVDPDAALEELEKMEKARMMERMSLKHQNSGKWAKS--KAIMAKYDLEARQAM 323
Query: 435 TEQLQQHALLTRKMKSMKDSSSSDDSSDE-----DDVDENSAGSDQDRASKLYATAKE-K 488
EQL ++ LT+K++ + +S + +E D V+E +D L + +++ K
Sbjct: 324 QEQLAKNKELTQKLQVVSESEEEGGADEEEALVPDIVNEVQKTADGPNPWMLRSCSRDAK 383
Query: 489 TLKVLAEDDEVPESGVLSLP 508
++ A+ +++PES P
Sbjct: 384 ENEIQADSEQLPESAAHEFP 403
>sp|Q5TAP6|UT14C_HUMAN U3 small nucleolar RNA-associated protein 14 homolog C OS=Homo
sapiens GN=UTP14C PE=2 SV=1
Length = 766
Score = 85.1 bits (209), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 95/319 (29%), Positives = 178/319 (55%), Gaps = 29/319 (9%)
Query: 144 DGDNDERHLRMLQGVTGMPSEFFEGKKKKKNVVISEAYPE-SEFNPTRDVLDGNGQ-ISI 201
D D + +H ++L+ + + +GK ++K SEA + SEF+ + +G+G+ + +
Sbjct: 35 DSDGERKHQKLLEAIISL-----DGKNRRKLAERSEASLKVSEFSVSS---EGSGEKLGL 86
Query: 202 DDLLEPLQGKSGYSKLRKRMHQMRKKSTSVLAPLPKPEQEKLERKVVYEQSKKDITKWEP 261
DLLEP++ S + ++K++++++ K L PL K + E++ R+V + ++ + ++KW+P
Sbjct: 87 ADLLEPVKTSSSLATVKKQLNRVKSKKVVEL-PLNKEKIEQIHREVAFSKTSQVLSKWDP 145
Query: 262 LVKMNREAPSIYFDEDTNLG-----FSTVGAIAAGFEPRTEFEKKMASLVNDDK--VKEA 314
++ N++A + F LG + + +G++ RT E+++ +L++ +K V +
Sbjct: 146 IILKNQQAEQLVFP----LGKEQPAIAPIEHALSGWKARTPLEQEIFNLLHKNKQPVTDP 201
Query: 315 HKQDGSKLLELNKISVEDYLEERNHVAKMRSLLFRHEMKRKRIKKIKSKTYHRLLKKDRL 374
K L +S+E+ R + + R+L +E K ++ KKIKSK YH+++KK +
Sbjct: 202 LLTPMEK-ASLQAMSLEEAKMHRAELQRARALQSYYEAKARKEKKIKSKKYHKVVKKGKA 260
Query: 375 KAASVEM----LMDPEAAKEEARKQEFKRAEERMTLKHKNSSRWAKRILKRGLDAQDEGT 430
K A E ++P A EE K E R ERM+LKH+NS +WAK K + D
Sbjct: 261 KKALKEFEQLQKVNPTVALEEMEKIENARMMERMSLKHQNSGKWAKS--KAIMAKYDLEA 318
Query: 431 RAAITEQLQQHALLTRKMK 449
R A+ EQL ++ LT+K++
Sbjct: 319 RQAMQEQLAKNKELTQKLQ 337
>sp|Q967Z0|MYSP_DERFA Paramyosin (Fragment) OS=Dermatophagoides farinae PE=1 SV=1
Length = 692
Score = 33.9 bits (76), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 589 EAEANMDAGNGTNNDVQKNVKTDSFTLHVDHESHPDSVFKSFEDVVRDPG 638
E E ++DA N N D+QK +K + + + ++H D V + + V G
Sbjct: 463 ELELSLDAANKANIDLQKTIKKQALQI-TELQAHYDEVHRQLQQAVDQLG 511
>sp|Q9BMM8|MYSP_SARSC Paramyosin OS=Sarcoptes scabiei PE=2 SV=1
Length = 876
Score = 33.5 bits (75), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 589 EAEANMDAGNGTNNDVQKNVKTDSFTLHVDHESHPDSVFKSFEDVVRDPG 638
E E ++DA N N D+QK +K + + + ++H D V + + V G
Sbjct: 549 ELELSLDAANKANIDLQKTIKKQALQI-TELQAHYDEVHRQLQQAVDQLG 597
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.309 0.128 0.352
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 275,101,555
Number of Sequences: 539616
Number of extensions: 13039126
Number of successful extensions: 69571
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 1162
Number of HSP's that attempted gapping in prelim test: 64535
Number of HSP's gapped (non-prelim): 5301
length of query: 707
length of database: 191,569,459
effective HSP length: 125
effective length of query: 582
effective length of database: 124,117,459
effective search space: 72236361138
effective search space used: 72236361138
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 65 (29.6 bits)