Query 005224
Match_columns 707
No_of_seqs 716 out of 6016
Neff 8.9
Searched_HMMs 29240
Date Mon Mar 25 19:07:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005224.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/005224hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4asz_A BDNF/NT-3 growth factor 100.0 3.6E-55 1.2E-59 455.9 20.1 262 375-654 13-292 (299)
2 4aoj_A High affinity nerve gro 100.0 1.9E-54 6.4E-59 456.7 24.5 262 375-654 41-322 (329)
3 4fih_A Serine/threonine-protei 100.0 1.4E-54 4.9E-59 457.2 20.0 260 375-694 74-334 (346)
4 4gt4_A Tyrosine-protein kinase 100.0 2.3E-54 8E-59 451.7 19.6 257 376-650 27-305 (308)
5 4aw0_A HPDK1, 3-phosphoinositi 100.0 7.1E-54 2.4E-58 445.2 19.7 258 375-692 32-299 (311)
6 3omv_A RAF proto-oncogene seri 100.0 3.4E-53 1.2E-57 441.1 24.4 268 371-655 32-304 (307)
7 4fie_A Serine/threonine-protei 100.0 2.6E-53 9E-58 458.4 22.9 260 375-694 151-411 (423)
8 4g3f_A NF-kappa-beta-inducing 100.0 2.1E-52 7.1E-57 439.4 24.5 255 375-651 58-316 (336)
9 4b9d_A Serine/threonine-protei 100.0 9.6E-53 3.3E-57 443.9 20.5 250 375-644 24-276 (350)
10 3hyh_A Carbon catabolite-derep 100.0 4.9E-53 1.7E-57 433.0 16.8 254 375-692 13-271 (275)
11 3fpq_A Serine/threonine-protei 100.0 1.5E-52 5.3E-57 433.1 20.1 253 378-690 29-289 (290)
12 3ubd_A Ribosomal protein S6 ki 100.0 1E-53 3.5E-58 444.0 10.7 270 375-706 24-304 (304)
13 4ase_A Vascular endothelial gr 100.0 8.2E-52 2.8E-56 440.1 20.3 271 366-653 55-349 (353)
14 4f9c_A Cell division cycle 7-r 100.0 6.1E-51 2.1E-55 436.1 19.4 307 369-689 15-358 (361)
15 4b99_A Mitogen-activated prote 100.0 9.8E-51 3.4E-55 439.2 16.5 287 375-690 54-351 (398)
16 3hmm_A TGF-beta receptor type- 100.0 2.5E-50 8.5E-55 422.0 18.5 265 376-652 4-298 (303)
17 4g31_A Eukaryotic translation 100.0 3.8E-50 1.3E-54 418.7 18.2 264 375-692 5-288 (299)
18 3v5w_A G-protein coupled recep 100.0 3.7E-48 1.2E-52 436.4 18.9 258 374-692 188-458 (689)
19 3uto_A Twitchin; kinase, muscl 100.0 9.9E-48 3.4E-52 435.7 21.9 260 374-692 156-419 (573)
20 3fe3_A MAP/microtubule affinit 100.0 1.3E-44 4.6E-49 383.6 22.9 257 374-693 14-274 (328)
21 3uim_A Brassinosteroid insensi 100.0 2.3E-44 7.9E-49 381.7 22.1 284 359-648 14-308 (326)
22 3fxz_A Serine/threonine-protei 100.0 4.3E-44 1.5E-48 374.6 23.5 259 374-692 19-278 (297)
23 2qkw_B Protein kinase; three-h 100.0 5.9E-44 2E-48 377.9 23.2 279 366-652 30-316 (321)
24 4aw2_A Serine/threonine-protei 100.0 1.5E-44 5.3E-49 396.7 19.3 272 365-692 64-347 (437)
25 3txo_A PKC-L, NPKC-ETA, protei 100.0 8.5E-45 2.9E-49 388.9 16.3 204 372-587 20-228 (353)
26 3niz_A Rhodanese family protei 100.0 2.1E-44 7E-49 379.7 18.3 277 374-691 20-308 (311)
27 3v8s_A RHO-associated protein 100.0 1.4E-44 4.9E-49 394.0 16.6 209 367-587 61-277 (410)
28 4dc2_A Protein kinase C IOTA t 100.0 1.9E-44 6.4E-49 391.0 17.1 200 374-585 51-255 (396)
29 2yab_A Death-associated protei 100.0 1E-43 3.5E-48 381.5 22.4 259 374-691 11-280 (361)
30 1o6l_A RAC-beta serine/threoni 100.0 4.1E-44 1.4E-48 381.1 18.9 202 374-587 4-209 (337)
31 3zgw_A Maternal embryonic leuc 100.0 3.3E-44 1.1E-48 383.1 17.7 259 373-692 8-269 (347)
32 2c30_A Serine/threonine-protei 100.0 1.9E-43 6.5E-48 374.0 23.0 270 363-692 23-303 (321)
33 3o0g_A Cell division protein k 100.0 2.7E-44 9.3E-49 375.1 15.8 276 375-690 2-289 (292)
34 1fot_A TPK1 delta, CAMP-depend 100.0 6.8E-44 2.3E-48 376.6 18.5 199 374-587 5-207 (318)
35 3a8x_A Protein kinase C IOTA t 100.0 8.4E-44 2.9E-48 380.2 18.9 200 374-585 8-212 (345)
36 3llt_A Serine/threonine kinase 100.0 9.6E-44 3.3E-48 382.4 19.1 301 361-688 21-360 (360)
37 1xjd_A Protein kinase C, theta 100.0 6.9E-44 2.4E-48 380.5 17.8 260 371-692 13-278 (345)
38 2vd5_A DMPK protein; serine/th 100.0 7.5E-44 2.6E-48 388.6 18.3 213 365-587 51-274 (412)
39 3gni_B Strad alpha; kinase fol 100.0 8.5E-44 2.9E-48 387.1 18.4 307 374-692 24-342 (389)
40 1ob3_A PFPK5, cell division co 100.0 6.1E-44 2.1E-48 371.7 15.3 274 375-689 2-286 (288)
41 1tki_A Titin; serine kinase, m 100.0 1.5E-43 5.3E-48 374.6 18.2 259 374-691 4-265 (321)
42 2psq_A Fibroblast growth facto 100.0 7.3E-43 2.5E-47 376.8 23.7 262 374-653 80-366 (370)
43 3oz6_A Mitogen-activated prote 100.0 2.9E-43 9.9E-48 382.8 19.7 305 373-690 7-335 (388)
44 1kob_A Twitchin; kinase, intra 100.0 8E-43 2.7E-47 378.0 22.9 260 374-692 50-313 (387)
45 1rdq_E PKA C-alpha, CAMP-depen 100.0 2.2E-43 7.6E-48 377.6 18.2 198 375-587 41-242 (350)
46 2pmi_A Negative RE, cyclin-dep 100.0 9.5E-44 3.3E-48 375.6 15.1 293 374-695 4-305 (317)
47 3kul_A Ephrin type-A receptor 100.0 9.9E-43 3.4E-47 369.2 22.8 264 374-655 48-317 (325)
48 3s95_A LIMK-1, LIM domain kina 100.0 1.4E-42 4.7E-47 365.4 23.3 269 374-654 9-285 (310)
49 2y0a_A Death-associated protei 100.0 6.1E-43 2.1E-47 370.9 20.7 259 374-691 10-279 (326)
50 3g33_A Cell division protein k 100.0 1.2E-42 4E-47 365.6 22.7 283 372-692 6-305 (308)
51 3a62_A Ribosomal protein S6 ki 100.0 2.5E-43 8.5E-48 374.1 17.2 202 374-587 16-225 (327)
52 2nru_A Interleukin-1 receptor- 100.0 1.9E-41 6.4E-46 356.1 30.8 280 361-650 11-305 (307)
53 3p86_A Serine/threonine-protei 100.0 9E-43 3.1E-47 366.7 20.6 267 368-652 30-299 (309)
54 2i0e_A Protein kinase C-beta I 100.0 5.1E-43 1.8E-47 374.9 18.4 202 373-586 18-224 (353)
55 2acx_A G protein-coupled recep 100.0 3E-43 1E-47 395.8 17.4 263 373-692 182-453 (576)
56 4fr4_A YANK1, serine/threonine 100.0 3.5E-43 1.2E-47 379.7 17.0 199 374-585 14-219 (384)
57 2bdw_A Hypothetical protein K1 100.0 6.4E-43 2.2E-47 376.0 19.0 257 374-689 28-290 (362)
58 3c0i_A Peripheral plasma membr 100.0 3.7E-43 1.3E-47 376.5 16.3 203 374-586 23-236 (351)
59 3sxs_A Cytoplasmic tyrosine-pr 100.0 1.3E-42 4.5E-47 357.5 19.6 259 372-651 5-264 (268)
60 4hcu_A Tyrosine-protein kinase 100.0 2E-42 7E-47 356.3 21.0 258 373-651 8-266 (269)
61 3soa_A Calcium/calmodulin-depe 100.0 1.5E-42 5.3E-47 382.2 21.0 259 373-689 9-273 (444)
62 4ejn_A RAC-alpha serine/threon 100.0 2.7E-43 9.3E-48 390.0 15.0 257 374-692 147-413 (446)
63 3tki_A Serine/threonine-protei 100.0 2.5E-43 8.5E-48 373.4 13.9 204 374-587 6-212 (323)
64 3h4j_B AMPK kdaid, SNF1-like p 100.0 4.8E-43 1.6E-47 372.5 16.0 254 375-692 9-267 (336)
65 1qcf_A Haematopoetic cell kina 100.0 4.9E-43 1.7E-47 388.7 16.5 265 367-652 180-445 (454)
66 2w4o_A Calcium/calmodulin-depe 100.0 1.7E-42 5.7E-47 371.1 20.0 261 373-693 51-315 (349)
67 3ttj_A Mitogen-activated prote 100.0 2.6E-43 9E-48 391.2 14.1 284 374-689 61-361 (464)
68 1k9a_A Carboxyl-terminal SRC k 100.0 6E-42 2.1E-46 379.4 24.9 256 371-652 189-446 (450)
69 2x4f_A Myosin light chain kina 100.0 6.1E-43 2.1E-47 377.6 15.8 254 379-690 93-349 (373)
70 3ugc_A Tyrosine-protein kinase 100.0 1.8E-42 6.2E-47 361.8 18.7 272 374-653 9-293 (295)
71 3cbl_A C-FES, proto-oncogene t 100.0 1.3E-42 4.5E-47 375.9 18.3 264 370-652 109-375 (377)
72 3mtl_A Cell division protein k 100.0 7.6E-43 2.6E-47 369.9 15.7 285 375-693 2-291 (324)
73 3rp9_A Mitogen-activated prote 100.0 9.1E-43 3.1E-47 387.3 17.0 298 374-692 52-405 (458)
74 2qol_A Ephrin receptor; recept 100.0 3.1E-42 1E-46 372.3 20.5 261 374-652 44-310 (373)
75 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 1.5E-42 5.3E-47 384.4 18.3 265 368-653 177-442 (452)
76 2zv2_A Calcium/calmodulin-depe 100.0 1E-42 3.4E-47 364.3 15.9 254 374-688 12-297 (298)
77 3kn6_A Ribosomal protein S6 ki 100.0 3.8E-42 1.3E-46 364.6 20.0 259 380-692 16-279 (325)
78 4eqm_A Protein kinase; transfe 100.0 1.6E-41 5.3E-46 354.7 24.0 261 374-651 10-275 (294)
79 3kvw_A DYRK2, dual specificity 100.0 3.3E-42 1.1E-46 379.0 19.8 200 374-588 96-304 (429)
80 2ac3_A MAP kinase-interacting 100.0 1.8E-42 6.2E-47 365.4 16.8 282 375-692 12-304 (316)
81 3uc3_A Serine/threonine-protei 100.0 1.1E-42 3.9E-47 374.0 15.5 260 374-691 19-282 (361)
82 3gen_A Tyrosine-protein kinase 100.0 2.8E-42 9.5E-47 358.0 17.9 263 369-652 18-281 (283)
83 3vhe_A Vascular endothelial gr 100.0 2.9E-42 1E-46 370.5 18.6 270 365-651 12-355 (359)
84 3gbz_A Kinase, CMGC CDK; ssgci 100.0 6E-43 2.1E-47 371.5 13.1 286 373-692 32-327 (329)
85 1luf_A Muscle-specific tyrosin 100.0 3.8E-42 1.3E-46 367.1 19.3 266 370-653 42-337 (343)
86 2r5t_A Serine/threonine-protei 100.0 1.1E-42 3.8E-47 375.0 14.9 244 374-640 37-285 (373)
87 3p1a_A MYT1 kinase, membrane-a 100.0 6.5E-43 2.2E-47 368.2 12.8 251 374-689 56-310 (311)
88 3f3z_A Calcium/calmodulin-depe 100.0 4.9E-42 1.7E-46 354.9 19.1 259 374-692 8-270 (277)
89 3c4z_A Rhodopsin kinase; Ser/T 100.0 3.2E-42 1.1E-46 386.6 18.9 203 374-586 184-392 (543)
90 4agu_A Cyclin-dependent kinase 100.0 6.3E-42 2.2E-46 360.3 20.1 285 375-692 3-293 (311)
91 2a2a_A Death-associated protei 100.0 7.6E-42 2.6E-46 361.7 20.8 259 374-691 11-280 (321)
92 3soc_A Activin receptor type-2 100.0 8.8E-42 3E-46 361.4 21.2 269 371-652 20-319 (322)
93 3nsz_A CK II alpha, casein kin 100.0 9.7E-42 3.3E-46 362.0 21.5 280 375-692 36-328 (330)
94 1opk_A P150, C-ABL, proto-onco 100.0 2.1E-42 7E-47 387.5 16.8 263 369-651 214-478 (495)
95 3tt0_A Basic fibroblast growth 100.0 2.2E-41 7.4E-46 367.1 24.1 265 373-655 67-356 (382)
96 2eue_A Carbon catabolite derep 100.0 4E-42 1.4E-46 355.4 16.7 254 375-692 13-271 (275)
97 3n9x_A Phosphotransferase; mal 100.0 2.8E-42 9.5E-47 380.2 16.5 301 374-692 25-370 (432)
98 2ivs_A Proto-oncogene tyrosine 100.0 9.5E-42 3.2E-46 359.3 19.8 263 371-651 19-311 (314)
99 3lb7_A RAF proto-oncogene seri 100.0 5.3E-41 1.8E-45 352.9 25.4 267 372-655 33-304 (307)
100 1qpc_A LCK kinase; alpha beta 100.0 9.4E-42 3.2E-46 353.2 18.9 265 369-654 7-272 (279)
101 3mi9_A Cell division protein k 100.0 8.4E-42 2.9E-46 366.0 19.1 295 374-695 16-323 (351)
102 3kk8_A Calcium/calmodulin depe 100.0 1.7E-41 5.8E-46 352.1 20.8 260 374-692 5-270 (284)
103 3kfa_A Tyrosine-protein kinase 100.0 7E-42 2.4E-46 355.8 17.8 265 368-652 6-272 (288)
104 1mp8_A Focal adhesion kinase 1 100.0 1.1E-41 3.9E-46 353.2 19.2 259 372-651 12-276 (281)
105 1cm8_A Phosphorylated MAP kina 100.0 6.5E-42 2.2E-46 369.0 17.7 278 374-692 24-316 (367)
106 3t9t_A Tyrosine-protein kinase 100.0 1.3E-41 4.6E-46 349.5 19.0 258 373-651 6-264 (267)
107 3qup_A Tyrosine-protein kinase 100.0 1.2E-41 4.1E-46 360.3 19.1 266 369-652 17-299 (323)
108 3lm5_A Serine/threonine-protei 100.0 1.1E-41 3.6E-46 361.6 18.7 273 364-693 17-297 (327)
109 3l9p_A Anaplastic lymphoma kin 100.0 7E-42 2.4E-46 368.8 17.5 261 374-652 70-346 (367)
110 2izr_A Casein kinase I isoform 100.0 6.3E-41 2.1E-45 356.1 24.6 272 374-658 8-288 (330)
111 3op5_A Serine/threonine-protei 100.0 2.3E-41 7.8E-46 364.5 21.4 282 373-662 33-340 (364)
112 3kmu_A ILK, integrin-linked ki 100.0 2.5E-41 8.5E-46 347.9 20.6 255 374-651 9-270 (271)
113 1csn_A Casein kinase-1; phosph 100.0 6.8E-41 2.3E-45 350.0 24.1 273 374-658 9-290 (298)
114 3dtc_A Mitogen-activated prote 100.0 3E-41 1E-45 347.8 21.0 253 374-648 6-270 (271)
115 3hko_A Calcium/calmodulin-depe 100.0 2.9E-42 9.9E-47 368.4 13.8 272 369-692 20-339 (345)
116 2r3i_A Cell division protein k 100.0 7E-42 2.4E-46 357.8 16.2 286 375-692 3-292 (299)
117 2rku_A Serine/threonine-protei 100.0 3.1E-41 1.1E-45 352.2 21.0 259 374-694 14-276 (294)
118 1rjb_A FL cytokine receptor; k 100.0 2.8E-41 9.5E-46 360.8 20.9 269 369-654 39-337 (344)
119 2qr7_A Ribosomal protein S6 ki 100.0 4.6E-42 1.6E-46 366.3 14.8 258 373-689 20-283 (342)
120 3is5_A Calcium-dependent prote 100.0 9.4E-42 3.2E-46 354.7 16.7 256 375-689 22-284 (285)
121 1mqb_A Ephrin type-A receptor 100.0 7.2E-41 2.5E-45 356.1 23.7 277 374-676 43-326 (333)
122 2h8h_A Proto-oncogene tyrosine 100.0 4.3E-42 1.5E-46 388.5 15.1 265 367-652 259-524 (535)
123 3poz_A Epidermal growth factor 100.0 3.2E-41 1.1E-45 357.8 20.9 258 374-651 14-278 (327)
124 3eqc_A Dual specificity mitoge 100.0 4.1E-42 1.4E-46 369.7 14.1 297 374-693 32-334 (360)
125 2eva_A TAK1 kinase - TAB1 chim 100.0 7.6E-41 2.6E-45 351.7 23.3 262 374-658 7-270 (307)
126 3q4u_A Activin receptor type-1 100.0 3.9E-41 1.3E-45 352.4 21.0 256 374-649 7-300 (301)
127 2y94_A 5'-AMP-activated protei 100.0 7.5E-42 2.6E-46 379.2 16.4 200 375-587 16-220 (476)
128 1ua2_A CAK, cell division prot 100.0 3.9E-42 1.3E-46 367.9 13.6 287 372-692 7-300 (346)
129 1wak_A Serine/threonine-protei 100.0 4.3E-42 1.5E-46 374.1 14.0 198 374-586 36-296 (397)
130 1t46_A HOMO sapiens V-KIT hard 100.0 6.1E-41 2.1E-45 352.9 22.4 266 372-654 20-310 (313)
131 2owb_A Serine/threonine-protei 100.0 3.9E-41 1.4E-45 358.4 21.1 258 374-693 40-301 (335)
132 1nxk_A MAP kinase-activated pr 100.0 1.1E-41 3.8E-46 371.3 17.2 196 375-586 61-266 (400)
133 3pfq_A PKC-B, PKC-beta, protei 100.0 1.1E-41 3.7E-46 394.4 17.6 204 372-587 338-546 (674)
134 3eb0_A Putative uncharacterize 100.0 1.7E-41 5.9E-46 368.1 17.9 280 371-689 3-327 (383)
135 3kex_A Receptor tyrosine-prote 100.0 1.5E-41 5E-46 360.2 16.3 258 374-651 12-276 (325)
136 3pg1_A Mitogen-activated prote 100.0 8.7E-42 3E-46 367.4 14.8 292 366-693 13-326 (362)
137 3rgf_A Cyclin-dependent kinase 100.0 6.6E-42 2.2E-46 374.2 13.9 285 376-693 21-343 (405)
138 2vx3_A Dual specificity tyrosi 100.0 1.4E-41 4.8E-46 368.6 16.3 203 371-588 50-263 (382)
139 2fst_X Mitogen-activated prote 100.0 1.1E-41 3.9E-46 366.8 15.5 281 374-692 28-320 (367)
140 4euu_A Serine/threonine-protei 100.0 2.8E-40 9.6E-45 349.3 25.8 265 374-649 8-307 (319)
141 4aaa_A Cyclin-dependent kinase 100.0 2.1E-41 7.1E-46 359.9 17.2 285 374-691 24-314 (331)
142 2jam_A Calcium/calmodulin-depe 100.0 1.9E-41 6.6E-46 355.6 16.4 200 374-587 8-211 (304)
143 3cok_A Serine/threonine-protei 100.0 6.6E-41 2.3E-45 346.7 20.1 257 375-692 11-271 (278)
144 2pvf_A Fibroblast growth facto 100.0 9.6E-41 3.3E-45 355.2 21.7 265 373-655 33-322 (334)
145 2xrw_A Mitogen-activated prote 100.0 5.2E-41 1.8E-45 362.7 19.6 285 374-690 24-325 (371)
146 2jii_A Serine/threonine-protei 100.0 3.8E-41 1.3E-45 361.1 18.2 272 374-656 41-341 (352)
147 1z57_A Dual specificity protei 100.0 3.8E-41 1.3E-45 358.2 17.9 288 374-689 13-334 (339)
148 2y7j_A Phosphorylase B kinase 100.0 6.7E-41 2.3E-45 360.9 19.9 261 369-688 88-364 (365)
149 1vzo_A Ribosomal protein S6 ki 100.0 9.4E-42 3.2E-46 366.2 13.0 201 374-585 53-264 (355)
150 3lxp_A Non-receptor tyrosine-p 100.0 1.7E-40 5.9E-45 350.8 22.5 269 377-655 33-314 (318)
151 2ozo_A Tyrosine-protein kinase 100.0 1.3E-40 4.6E-45 381.7 23.4 262 375-655 335-602 (613)
152 3lxl_A Tyrosine-protein kinase 100.0 6.4E-41 2.2E-45 355.5 19.1 274 374-655 22-307 (327)
153 3ork_A Serine/threonine protei 100.0 1.3E-40 4.5E-45 350.5 21.3 262 374-651 11-281 (311)
154 2i1m_A Macrophage colony-stimu 100.0 5.6E-41 1.9E-45 356.7 18.5 266 369-651 40-326 (333)
155 4fvq_A Tyrosine-protein kinase 100.0 6.3E-41 2.1E-45 348.8 18.5 252 374-651 7-275 (289)
156 3brb_A Proto-oncogene tyrosine 100.0 8E-41 2.7E-45 352.3 19.4 270 368-655 27-312 (313)
157 4e5w_A Tyrosine-protein kinase 100.0 1E-40 3.5E-45 349.4 20.0 269 374-650 20-301 (302)
158 2xir_A Vascular endothelial gr 100.0 8.4E-41 2.9E-45 352.4 19.4 271 365-652 17-311 (316)
159 1u59_A Tyrosine-protein kinase 100.0 2.4E-40 8.3E-45 344.3 22.5 260 374-652 8-273 (287)
160 4f0f_A Serine/threonine-protei 100.0 2.6E-40 9E-45 343.8 22.7 254 374-648 18-286 (287)
161 3f66_A Hepatocyte growth facto 100.0 2.4E-40 8.1E-45 346.1 22.4 264 375-655 25-295 (298)
162 3cc6_A Protein tyrosine kinase 100.0 2.2E-40 7.5E-45 343.4 21.7 259 373-652 10-274 (281)
163 2yex_A Serine/threonine-protei 100.0 2.3E-41 7.8E-46 349.5 14.2 262 374-692 6-270 (276)
164 1t4h_A Serine/threonine-protei 100.0 1.2E-40 4.2E-45 346.9 19.8 255 376-690 27-289 (290)
165 3qyz_A Mitogen-activated prote 100.0 2.7E-41 9.3E-46 363.9 15.3 287 374-692 26-322 (364)
166 3c1x_A Hepatocyte growth facto 100.0 1E-40 3.4E-45 360.2 19.7 264 376-656 90-360 (373)
167 1p4o_A Insulin-like growth fac 100.0 4.1E-41 1.4E-45 356.0 16.1 269 365-651 15-299 (322)
168 3bhy_A Death-associated protei 100.0 7.2E-41 2.5E-45 347.2 17.7 257 374-689 4-271 (283)
169 1byg_A CSK, protein (C-termina 100.0 1E-40 3.4E-45 345.4 18.6 254 373-652 19-274 (278)
170 4e7w_A Glycogen synthase kinas 100.0 8E-41 2.7E-45 364.0 18.7 281 374-692 39-330 (394)
171 3qd2_B Eukaryotic translation 100.0 2.2E-40 7.5E-45 351.4 21.7 207 374-583 5-276 (332)
172 3og7_A AKAP9-BRAF fusion prote 100.0 2.7E-40 9.2E-45 344.3 21.8 264 371-651 20-288 (289)
173 1j1b_A Glycogen synthase kinas 100.0 4.1E-41 1.4E-45 369.3 16.2 277 375-690 54-343 (420)
174 1blx_A Cyclin-dependent kinase 100.0 1E-40 3.5E-45 353.4 18.7 293 372-700 8-313 (326)
175 1xbb_A Tyrosine-protein kinase 100.0 1.7E-40 5.7E-45 346.2 19.9 262 371-652 12-280 (291)
176 2j7t_A Serine/threonine-protei 100.0 6.1E-41 2.1E-45 351.2 16.3 261 374-692 18-284 (302)
177 3lij_A Calcium/calmodulin depe 100.0 5.9E-41 2E-45 376.1 17.3 256 374-689 36-297 (494)
178 3q5i_A Protein kinase; CDPK, m 100.0 1.1E-40 3.8E-45 374.8 19.4 259 374-692 35-310 (504)
179 3i6u_A CDS1, serine/threonine- 100.0 3E-41 1E-45 370.3 14.4 260 372-690 132-406 (419)
180 3mdy_A Bone morphogenetic prot 100.0 1.3E-39 4.6E-44 346.4 26.4 263 371-653 33-333 (337)
181 3nyv_A Calmodulin-domain prote 100.0 3.8E-41 1.3E-45 376.9 15.0 259 374-692 25-290 (484)
182 4exu_A Mitogen-activated prote 100.0 5.2E-41 1.8E-45 362.7 15.2 281 374-692 41-332 (371)
183 3pls_A Macrophage-stimulating 100.0 8.1E-40 2.8E-44 341.8 23.7 264 376-655 22-291 (298)
184 3fdn_A Serine/threonine-protei 100.0 4E-40 1.4E-44 341.1 21.0 200 374-587 8-211 (279)
185 1phk_A Phosphorylase kinase; g 100.0 3.5E-40 1.2E-44 344.7 20.8 260 374-692 16-292 (298)
186 2b9h_A MAP kinase FUS3, mitoge 100.0 2.6E-40 8.9E-45 354.5 19.9 295 374-693 10-315 (353)
187 2a19_B Interferon-induced, dou 100.0 2.9E-40 9.9E-45 342.6 19.2 250 373-652 9-275 (284)
188 3byv_A Rhoptry kinase; malaria 100.0 3E-42 1E-46 373.3 4.4 197 374-585 72-315 (377)
189 3uzp_A CKI-delta, CKID, casein 100.0 1.2E-39 4E-44 340.3 23.9 268 374-656 8-285 (296)
190 2v62_A Serine/threonine-protei 100.0 8.9E-41 3.1E-45 357.2 15.8 269 374-651 36-328 (345)
191 2eu9_A Dual specificity protei 100.0 1.6E-40 5.4E-45 356.0 17.7 291 374-692 18-342 (355)
192 3lzb_A Epidermal growth factor 100.0 4.3E-40 1.5E-44 349.2 20.6 258 374-651 14-278 (327)
193 2wqm_A Serine/threonine-protei 100.0 1.4E-39 4.9E-44 342.2 24.4 261 375-653 32-299 (310)
194 2i6l_A Mitogen-activated prote 100.0 1.2E-40 4E-45 351.6 16.1 287 374-692 10-314 (320)
195 3dbq_A Dual specificity protei 100.0 6.9E-40 2.4E-44 350.0 22.2 252 374-645 8-274 (343)
196 1fvr_A Tyrosine-protein kinase 100.0 6.5E-40 2.2E-44 347.7 21.6 258 375-653 25-302 (327)
197 2w1i_A JAK2; chromosomal rearr 100.0 5.3E-40 1.8E-44 348.3 20.7 269 374-652 40-323 (326)
198 4hgt_A Casein kinase I isoform 100.0 7.5E-40 2.6E-44 341.6 21.5 268 373-655 7-284 (296)
199 3e3p_A Protein kinase, putativ 100.0 3.5E-40 1.2E-44 354.5 19.2 297 368-695 16-326 (360)
200 3mwu_A Calmodulin-domain prote 100.0 7E-41 2.4E-45 374.9 14.2 259 374-692 21-285 (486)
201 1q8y_A SR protein kinase; tran 100.0 7.8E-41 2.7E-45 361.3 13.9 291 374-693 18-343 (373)
202 2vwi_A Serine/threonine-protei 100.0 5.1E-41 1.7E-45 351.7 12.0 276 371-691 11-295 (303)
203 4fl3_A Tyrosine-protein kinase 100.0 5.6E-40 1.9E-44 377.5 21.7 252 381-652 375-632 (635)
204 2h34_A Serine/threonine-protei 100.0 1.4E-39 4.8E-44 342.4 22.9 259 374-651 33-296 (309)
205 1u5q_A Serine/threonine protei 100.0 8.8E-40 3E-44 349.6 21.3 198 375-588 54-258 (348)
206 1x8b_A WEE1HU, WEE1-like prote 100.0 1.1E-39 3.7E-44 338.6 21.3 252 374-691 10-287 (289)
207 4eut_A Serine/threonine-protei 100.0 8.1E-40 2.8E-44 356.4 21.1 267 374-651 8-309 (396)
208 2yfx_A Tyrosine-protein kinase 100.0 6.7E-40 2.3E-44 347.6 19.2 261 373-651 28-304 (327)
209 2buj_A Serine/threonine-protei 100.0 2.2E-39 7.4E-44 341.9 22.9 272 372-654 26-309 (317)
210 3g2f_A Bone morphogenetic prot 100.0 2.5E-39 8.4E-44 344.4 23.4 268 373-654 11-321 (336)
211 2zmd_A Dual specificity protei 100.0 2.1E-39 7.2E-44 352.2 23.0 250 375-645 56-321 (390)
212 2ycf_A Serine/threonine-protei 100.0 4.2E-40 1.4E-44 348.4 16.7 199 374-586 9-222 (322)
213 3e7e_A HBUB1, BUB1A, mitotic c 100.0 3E-39 1E-43 348.1 23.6 269 372-669 62-354 (365)
214 2clq_A Mitogen-activated prote 100.0 5.2E-39 1.8E-43 335.2 24.6 200 376-585 23-227 (295)
215 2vgo_A Serine/threonine-protei 100.0 1.9E-39 6.6E-44 336.8 21.2 200 374-587 13-216 (284)
216 3dls_A PAS domain-containing s 100.0 6.1E-40 2.1E-44 349.1 17.7 199 374-585 23-232 (335)
217 2w5a_A Serine/threonine-protei 100.0 1.1E-39 3.6E-44 337.7 19.0 207 374-587 5-220 (279)
218 3a7i_A MST3 kinase, serine/thr 100.0 3.5E-39 1.2E-43 338.2 22.8 201 374-587 21-223 (303)
219 3q60_A ROP5B; pseudokinase, tr 100.0 4E-41 1.4E-45 363.6 7.2 260 374-689 61-358 (371)
220 2h6d_A 5'-AMP-activated protei 100.0 3.1E-39 1.1E-43 333.6 20.2 200 374-586 10-214 (276)
221 1b6c_B TGF-B superfamily recep 100.0 7.4E-39 2.5E-43 341.5 23.3 266 370-652 37-337 (342)
222 3coi_A Mitogen-activated prote 100.0 4E-40 1.4E-44 353.2 13.5 278 374-692 23-314 (353)
223 2wtk_C Serine/threonine-protei 100.0 7.5E-39 2.6E-43 335.8 22.8 252 374-645 4-264 (305)
224 2x7f_A TRAF2 and NCK-interacti 100.0 2.1E-39 7.2E-44 343.4 18.2 212 365-587 14-238 (326)
225 3ll6_A Cyclin G-associated kin 100.0 3.6E-39 1.2E-43 342.8 19.6 268 371-654 24-311 (337)
226 3gxj_A TGF-beta receptor type- 100.0 7.3E-41 2.5E-45 350.5 6.4 259 375-651 3-297 (303)
227 3an0_A Dual specificity mitoge 100.0 7.8E-39 2.7E-43 341.3 22.0 204 373-588 49-262 (340)
228 3fme_A Dual specificity mitoge 100.0 8E-39 2.7E-43 332.9 21.4 259 373-690 5-273 (290)
229 3sv0_A Casein kinase I-like; t 100.0 8.7E-39 3E-43 355.3 22.5 270 374-655 6-282 (483)
230 1u46_A ACK-1, activated CDC42 100.0 2.3E-39 8E-44 337.1 16.5 260 374-651 17-284 (291)
231 3com_A Serine/threonine-protei 100.0 2E-38 7E-43 334.0 23.5 203 373-588 27-230 (314)
232 2wei_A Calmodulin-domain prote 100.0 1.6E-39 5.4E-44 338.1 14.6 257 374-690 21-283 (287)
233 2j0j_A Focal adhesion kinase 1 100.0 5.6E-39 1.9E-43 370.6 20.3 262 369-651 384-651 (656)
234 2rio_A Serine/threonine-protei 100.0 6.4E-39 2.2E-43 353.4 18.2 201 376-586 16-243 (434)
235 2pml_X PFPK7, Ser/Thr protein 100.0 2.9E-39 1E-43 345.6 15.0 275 374-691 30-330 (348)
236 3p23_A Serine/threonine-protei 100.0 5.8E-39 2E-43 353.0 16.3 258 373-689 22-289 (432)
237 3cek_A Dual specificity protei 100.0 2.4E-38 8.2E-43 333.5 19.0 212 365-588 18-244 (313)
238 1zy4_A Serine/threonine-protei 100.0 8.7E-38 3E-42 326.8 22.7 200 374-578 5-226 (303)
239 3aln_A Dual specificity mitoge 100.0 6.8E-38 2.3E-42 332.1 20.6 250 374-644 21-285 (327)
240 2y4i_B KSR2, HKSR2, kinase sup 100.0 3.5E-39 1.2E-43 340.5 9.9 268 366-652 24-303 (319)
241 3qa8_A MGC80376 protein; kinas 100.0 7.5E-39 2.6E-43 363.5 12.5 203 375-588 14-228 (676)
242 3fhr_A MAP kinase-activated pr 100.0 9.5E-38 3.2E-42 332.4 19.9 197 374-586 27-232 (336)
243 2iwi_A Serine/threonine-protei 100.0 5.4E-38 1.8E-42 330.5 17.5 201 371-585 27-241 (312)
244 3a99_A Proto-oncogene serine/t 100.0 3.8E-38 1.3E-42 333.2 13.7 202 370-585 38-251 (320)
245 2dyl_A Dual specificity mitoge 100.0 3.8E-37 1.3E-41 324.7 20.7 251 374-644 24-283 (318)
246 2vuw_A Serine/threonine-protei 100.0 4.9E-38 1.7E-42 334.6 3.7 191 374-584 19-278 (336)
247 3uqc_A Probable conserved tran 100.0 1.3E-35 4.3E-40 308.5 21.4 230 374-652 30-266 (286)
248 3m2w_A MAP kinase-activated pr 100.0 2.6E-35 9E-40 308.2 22.4 175 375-586 17-201 (299)
249 2pzi_A Probable serine/threoni 100.0 1.5E-35 5.1E-40 344.9 19.8 239 374-650 79-327 (681)
250 3dzo_A Rhoptry kinase domain; 100.0 2E-35 7E-40 323.3 18.3 240 375-644 78-363 (413)
251 4azs_A Methyltransferase WBDD; 100.0 1.2E-29 4E-34 287.5 5.9 185 382-582 241-437 (569)
252 3en9_A Glycoprotease, O-sialog 99.9 8.3E-27 2.8E-31 262.7 6.3 190 378-583 339-538 (540)
253 1zar_A RIO2 kinase; serine kin 99.9 2E-23 6.9E-28 215.6 10.8 153 367-556 82-252 (282)
254 2v9t_B SLIT homolog 2 protein 99.8 4.4E-19 1.5E-23 176.3 12.9 142 2-148 32-177 (220)
255 1zth_A RIO1 serine protein kin 99.8 3.6E-19 1.2E-23 181.4 11.4 137 376-526 48-219 (258)
256 3e6j_A Variable lymphocyte rec 99.8 1.7E-18 5.7E-23 173.2 15.0 139 2-147 40-184 (229)
257 2v70_A SLIT-2, SLIT homolog 2 99.8 8.1E-19 2.8E-23 174.3 11.1 142 2-149 32-179 (220)
258 1p9a_G Platelet glycoprotein I 99.8 1.9E-18 6.4E-23 179.3 13.1 144 1-151 76-223 (290)
259 3m19_A Variable lymphocyte rec 99.8 4.4E-18 1.5E-22 172.6 13.4 143 1-149 58-206 (251)
260 2wfh_A SLIT homolog 2 protein 99.7 5.7E-18 1.9E-22 164.6 11.8 137 5-149 13-152 (193)
261 2o6s_A Variable lymphocyte rec 99.7 5.6E-17 1.9E-21 159.4 15.4 133 2-140 28-165 (208)
262 1w8a_A SLIT protein; signaling 99.7 2.2E-17 7.6E-22 160.2 12.1 136 5-148 11-151 (192)
263 2o6q_A Variable lymphocyte rec 99.7 7E-17 2.4E-21 165.6 15.4 132 3-140 86-222 (270)
264 3rfs_A Internalin B, repeat mo 99.7 7.3E-17 2.5E-21 165.7 15.1 134 1-140 84-222 (272)
265 1ozn_A Reticulon 4 receptor; N 99.7 3.1E-17 1.1E-21 169.6 9.9 142 1-148 104-250 (285)
266 3v47_A TOLL-like receptor 5B a 99.7 1E-16 3.5E-21 177.1 12.9 142 2-148 275-421 (455)
267 2xot_A Amphoterin-induced prot 99.7 1.8E-17 6.3E-22 177.5 6.5 140 1-144 63-210 (361)
268 3vq2_A TLR4, TOLL-like recepto 99.7 5.4E-17 1.9E-21 186.1 10.8 146 1-151 423-573 (606)
269 3zyj_A Leucine-rich repeat-con 99.7 1.6E-16 5.4E-21 175.0 14.0 122 21-149 181-305 (440)
270 2z62_A TOLL-like receptor 4, v 99.7 1.2E-16 4E-21 164.4 10.8 147 2-149 76-251 (276)
271 2z66_A Variable lymphocyte rec 99.7 1.5E-16 5E-21 166.2 10.2 144 1-149 125-274 (306)
272 3rgz_A Protein brassinosteroid 99.7 2.1E-16 7.1E-21 186.3 11.9 135 1-140 513-721 (768)
273 3zyi_A Leucine-rich repeat-con 99.6 2.5E-16 8.7E-21 173.9 11.2 141 1-148 146-315 (452)
274 4g8a_A TOLL-like receptor 4; l 99.6 2E-16 7E-21 181.9 10.1 145 1-150 444-594 (635)
275 3m19_A Variable lymphocyte rec 99.6 1.5E-15 5.2E-20 153.8 14.6 130 2-137 35-169 (251)
276 4gyi_A RIO2 kinase; protein ki 99.6 4E-16 1.4E-20 165.4 10.5 137 375-526 95-265 (397)
277 2o6r_A Variable lymphocyte rec 99.6 1.8E-15 6E-20 144.6 13.7 129 4-140 9-141 (177)
278 3rgz_A Protein brassinosteroid 99.6 5.7E-16 1.9E-20 182.6 10.5 112 21-137 628-741 (768)
279 4fcg_A Uncharacterized protein 99.6 1E-15 3.5E-20 161.6 11.0 130 2-138 81-221 (328)
280 1p9a_G Platelet glycoprotein I 99.6 2.3E-15 7.9E-20 155.9 13.3 128 2-136 31-161 (290)
281 1ogq_A PGIP-2, polygalacturona 99.6 4.7E-16 1.6E-20 163.1 7.0 131 1-137 75-211 (313)
282 2o6q_A Variable lymphocyte rec 99.6 6.1E-15 2.1E-19 151.1 15.1 131 2-138 37-172 (270)
283 3rfs_A Internalin B, repeat mo 99.6 5.8E-15 2E-19 151.5 14.3 129 1-136 62-194 (272)
284 1ogq_A PGIP-2, polygalacturona 99.6 9.5E-16 3.2E-20 160.8 8.5 132 1-138 100-236 (313)
285 3a79_B TLR6, VLRB.59, TOLL-lik 99.6 1.9E-15 6.5E-20 171.7 11.3 138 2-146 353-520 (562)
286 4fcg_A Uncharacterized protein 99.6 2.7E-15 9.4E-20 158.3 11.4 131 1-138 103-244 (328)
287 3g39_A Variable lymphocyte rec 99.6 3.3E-15 1.1E-19 141.8 10.2 118 26-150 10-130 (170)
288 2ell_A Acidic leucine-rich nuc 99.6 2.5E-15 8.5E-20 142.2 9.2 128 2-137 24-161 (168)
289 4ezg_A Putative uncharacterize 99.6 3.6E-15 1.2E-19 145.1 10.5 128 2-137 44-173 (197)
290 1ziw_A TOLL-like receptor 3; i 99.6 4.1E-15 1.4E-19 172.9 12.5 144 1-150 479-637 (680)
291 2z7x_B TOLL-like receptor 1, v 99.6 1.5E-15 5.3E-20 170.7 8.3 142 1-148 323-494 (520)
292 1w8a_A SLIT protein; signaling 99.6 8.4E-15 2.9E-19 142.0 12.1 110 2-116 29-141 (192)
293 3t6q_A CD180 antigen; protein- 99.6 1.6E-15 5.6E-20 173.8 8.2 144 1-150 424-574 (606)
294 2xot_A Amphoterin-induced prot 99.6 5.8E-15 2E-19 158.0 11.5 130 2-137 39-177 (361)
295 2z63_A TOLL-like receptor 4, v 99.6 5.7E-15 2E-19 167.8 11.7 144 1-149 395-545 (570)
296 4g8a_A TOLL-like receptor 4; l 99.6 6.5E-15 2.2E-19 169.3 11.8 131 2-138 52-188 (635)
297 1ozn_A Reticulon 4 receptor; N 99.6 1.9E-14 6.5E-19 148.6 13.4 131 2-137 32-167 (285)
298 2z80_A TOLL-like receptor 2, v 99.6 6.5E-15 2.2E-19 157.0 10.0 145 2-147 100-326 (353)
299 3oja_A Leucine-rich immune mol 99.6 4E-15 1.4E-19 165.7 8.6 129 2-138 120-252 (487)
300 2r9u_A Variable lymphocyte rec 99.5 2E-14 6.8E-19 137.0 11.9 115 27-148 14-131 (174)
301 3o53_A Protein LRIM1, AGAP0063 99.5 6.2E-15 2.1E-19 154.8 8.7 132 1-140 119-254 (317)
302 2z81_A CD282 antigen, TOLL-lik 99.5 2.2E-14 7.4E-19 162.4 13.8 128 1-141 386-515 (549)
303 1xeu_A Internalin C; cellular 99.5 1.9E-14 6.4E-19 146.8 11.9 122 2-136 41-163 (263)
304 2id5_A Lingo-1, leucine rich r 99.5 7E-15 2.4E-19 163.5 8.9 142 1-147 175-344 (477)
305 2o6s_A Variable lymphocyte rec 99.5 1.5E-14 5.2E-19 141.9 10.1 127 1-138 51-180 (208)
306 2je0_A Acidic leucine-rich nuc 99.5 5.5E-15 1.9E-19 136.9 6.5 124 2-132 17-149 (149)
307 4ezg_A Putative uncharacterize 99.5 1E-14 3.4E-19 142.0 8.6 128 1-136 65-194 (197)
308 2v70_A SLIT-2, SLIT homolog 2 99.5 1.6E-14 5.5E-19 143.2 10.3 109 1-115 56-167 (220)
309 2z62_A TOLL-like receptor 4, v 99.5 2.2E-14 7.5E-19 147.3 11.6 130 2-137 28-163 (276)
310 3e6j_A Variable lymphocyte rec 99.5 5E-14 1.7E-18 140.5 13.8 127 4-137 21-149 (229)
311 2z66_A Variable lymphocyte rec 99.5 1.9E-14 6.6E-19 150.1 11.0 131 1-137 77-213 (306)
312 1a9n_A U2A', U2A'; complex (nu 99.5 9.8E-15 3.4E-19 139.3 7.2 127 1-136 18-153 (176)
313 1xku_A Decorin; proteoglycan, 99.5 4.8E-14 1.6E-18 148.8 13.2 131 1-138 144-278 (330)
314 2v9t_B SLIT homolog 2 protein 99.5 6E-14 2.1E-18 139.0 12.9 125 5-138 14-143 (220)
315 4eco_A Uncharacterized protein 99.5 6.7E-15 2.3E-19 169.6 6.3 124 13-136 194-343 (636)
316 4glp_A Monocyte differentiatio 99.5 1.7E-14 5.8E-19 150.9 8.7 131 2-136 145-285 (310)
317 3o6n_A APL1; leucine-rich repe 99.5 2.4E-14 8.2E-19 154.8 9.6 134 2-144 226-360 (390)
318 2xwt_C Thyrotropin receptor; s 99.5 2.9E-14 9.9E-19 143.2 9.3 130 2-136 31-169 (239)
319 1wwl_A Monocyte differentiatio 99.5 2E-14 6.8E-19 150.6 8.4 130 2-136 121-266 (312)
320 4eco_A Uncharacterized protein 99.5 7.4E-14 2.5E-18 160.8 13.8 125 3-135 434-578 (636)
321 4glp_A Monocyte differentiatio 99.5 2E-14 6.7E-19 150.4 7.6 127 1-136 168-307 (310)
322 3v47_A TOLL-like receptor 5B a 99.5 4E-14 1.4E-18 156.2 10.3 132 2-138 30-169 (455)
323 1dce_A Protein (RAB geranylger 99.5 5.5E-14 1.9E-18 159.0 11.3 119 3-130 442-567 (567)
324 4ecn_A Leucine-rich repeat pro 99.5 1.9E-14 6.7E-19 169.5 7.7 129 1-136 447-608 (876)
325 3j0a_A TOLL-like receptor 5; m 99.5 2.8E-14 9.5E-19 169.9 8.6 140 1-148 425-572 (844)
326 2ft3_A Biglycan; proteoglycan, 99.5 8.6E-14 2.9E-18 147.0 11.5 130 2-137 123-278 (332)
327 2id5_A Lingo-1, leucine rich r 99.5 5.4E-14 1.8E-18 156.3 10.4 130 2-136 32-165 (477)
328 1xku_A Decorin; proteoglycan, 99.5 1.5E-13 5.3E-18 144.9 12.8 127 2-136 76-205 (330)
329 2wfh_A SLIT homolog 2 protein 99.5 1.1E-13 3.9E-18 134.0 10.5 108 2-115 31-140 (193)
330 3zyi_A Leucine-rich repeat-con 99.5 1.5E-13 5.2E-18 151.6 12.9 134 2-136 75-231 (452)
331 3vq2_A TLR4, TOLL-like recepto 99.5 1.2E-13 4.3E-18 158.1 12.6 132 2-138 32-168 (606)
332 1h6t_A Internalin B; cell adhe 99.5 1.6E-13 5.3E-18 142.2 12.2 123 2-136 68-191 (291)
333 2o6r_A Variable lymphocyte rec 99.5 2.1E-13 7.3E-18 130.0 12.2 110 2-117 28-140 (177)
334 3zyj_A Leucine-rich repeat-con 99.5 1.5E-13 5E-18 151.2 12.4 134 2-136 64-220 (440)
335 1wwl_A Monocyte differentiatio 99.5 2.8E-14 9.4E-19 149.5 6.2 133 1-139 94-244 (312)
336 2xwt_C Thyrotropin receptor; s 99.5 7.4E-14 2.5E-18 140.2 8.9 128 1-136 54-193 (239)
337 4b8c_D Glucose-repressible alc 99.5 8.3E-14 2.9E-18 162.3 10.2 126 4-137 193-330 (727)
338 3t6q_A CD180 antigen; protein- 99.5 1.5E-13 5.3E-18 157.3 12.0 131 2-137 33-167 (606)
339 1h6u_A Internalin H; cell adhe 99.5 1.2E-13 4E-18 144.4 9.9 127 1-139 84-211 (308)
340 4ecn_A Leucine-rich repeat pro 99.5 3.1E-13 1.1E-17 159.2 14.4 125 3-135 674-818 (876)
341 1xeu_A Internalin C; cellular 99.4 2.6E-13 8.7E-18 138.4 11.8 126 1-138 62-187 (263)
342 3oja_B Anopheles plasmodium-re 99.4 2.5E-13 8.7E-18 155.3 13.0 127 2-135 75-204 (597)
343 1h6t_A Internalin B; cell adhe 99.4 1.4E-13 4.9E-18 142.5 9.8 125 1-137 89-214 (291)
344 2ft3_A Biglycan; proteoglycan, 99.4 3E-13 1E-17 142.8 11.8 126 3-136 55-185 (332)
345 3j0a_A TOLL-like receptor 5; m 99.4 2.7E-13 9.4E-18 161.3 12.8 132 2-138 24-163 (844)
346 2z7x_B TOLL-like receptor 1, v 99.4 1.5E-13 5.2E-18 154.3 9.9 129 2-136 302-434 (520)
347 3o6n_A APL1; leucine-rich repe 99.4 4.6E-13 1.6E-17 144.7 13.0 130 1-137 44-179 (390)
348 1h6u_A Internalin H; cell adhe 99.4 4.3E-13 1.5E-17 140.0 12.0 122 3-136 42-164 (308)
349 3a79_B TLR6, VLRB.59, TOLL-lik 99.4 3.6E-13 1.2E-17 152.9 12.2 134 2-136 331-486 (562)
350 2ifg_A High affinity nerve gro 99.4 1.6E-13 5.4E-18 145.9 8.5 116 28-150 11-130 (347)
351 3oja_A Leucine-rich immune mol 99.4 1.2E-13 4E-18 153.8 7.8 130 2-138 34-184 (487)
352 4b8c_D Glucose-repressible alc 99.4 3.3E-14 1.1E-18 165.7 3.4 129 1-137 223-355 (727)
353 3g39_A Variable lymphocyte rec 99.4 5.2E-13 1.8E-17 126.5 11.1 107 4-118 11-119 (170)
354 2z80_A TOLL-like receptor 2, v 99.4 2.5E-13 8.4E-18 144.8 9.1 130 2-137 52-188 (353)
355 2z81_A CD282 antigen, TOLL-lik 99.4 2.3E-13 7.8E-18 153.9 9.3 131 2-137 26-162 (549)
356 1m9s_A Internalin B; cell inva 99.4 4.3E-13 1.5E-17 152.6 11.6 125 1-137 64-189 (605)
357 1m9s_A Internalin B; cell inva 99.4 6E-13 2.1E-17 151.4 12.5 123 2-136 87-210 (605)
358 2ell_A Acidic leucine-rich nuc 99.4 2.6E-13 9.1E-18 128.2 8.0 111 1-119 48-165 (168)
359 2r9u_A Variable lymphocyte rec 99.4 8.5E-13 2.9E-17 125.6 11.5 108 4-118 14-122 (174)
360 1ziw_A TOLL-like receptor 3; i 99.4 6.4E-13 2.2E-17 154.4 12.7 132 2-138 25-160 (680)
361 3oja_B Anopheles plasmodium-re 99.4 4.5E-13 1.5E-17 153.2 11.0 132 1-138 50-186 (597)
362 2z63_A TOLL-like receptor 4, v 99.4 6.8E-13 2.3E-17 150.6 12.1 131 2-138 28-164 (570)
363 3cvr_A Invasion plasmid antige 99.4 8.7E-13 3E-17 148.5 11.6 116 1-137 99-221 (571)
364 4fmz_A Internalin; leucine ric 99.4 5.4E-13 1.9E-17 141.6 9.2 128 1-140 198-328 (347)
365 3o53_A Protein LRIM1, AGAP0063 99.4 4.2E-13 1.5E-17 140.7 6.2 128 1-136 57-204 (317)
366 1ds9_A Outer arm dynein; leuci 99.4 7.9E-15 2.7E-19 142.8 -6.6 129 2-140 18-157 (198)
367 2je0_A Acidic leucine-rich nuc 99.3 1.4E-12 4.8E-17 120.5 8.3 109 23-138 15-128 (149)
368 3cvr_A Invasion plasmid antige 99.3 5.8E-12 2E-16 141.8 14.1 116 3-138 60-175 (571)
369 1o6v_A Internalin A; bacterial 99.3 3.5E-12 1.2E-16 141.2 10.6 127 1-139 242-369 (466)
370 1dce_A Protein (RAB geranylger 99.3 2.8E-13 9.5E-18 153.2 1.7 119 6-139 427-549 (567)
371 1o6v_A Internalin A; bacterial 99.3 4.5E-12 1.5E-16 140.3 11.4 126 1-138 220-346 (466)
372 1a9n_A U2A', U2A'; complex (nu 99.3 2.7E-12 9.2E-17 122.3 8.2 112 19-139 13-129 (176)
373 3bz5_A Internalin-J, INLJ; leu 99.3 1E-11 3.5E-16 136.9 13.8 120 1-136 41-161 (457)
374 3tm0_A Aminoglycoside 3'-phosp 99.3 7E-12 2.4E-16 127.5 11.6 146 371-524 10-212 (263)
375 1ds9_A Outer arm dynein; leuci 99.3 4.2E-14 1.4E-18 137.7 -6.0 124 1-136 47-185 (198)
376 1jl5_A Outer protein YOPM; leu 99.3 2.6E-11 8.9E-16 133.5 14.7 121 2-137 131-251 (454)
377 4fmz_A Internalin; leucine ric 99.3 1E-11 3.4E-16 131.7 10.7 125 1-137 176-301 (347)
378 3g06_A SSPH2 (leucine-rich rep 99.2 2.3E-11 7.9E-16 138.6 13.1 117 2-136 141-274 (622)
379 3bz5_A Internalin-J, INLJ; leu 99.2 4.4E-11 1.5E-15 131.9 13.9 124 1-136 63-204 (457)
380 3g06_A SSPH2 (leucine-rich rep 99.2 5.1E-11 1.8E-15 135.7 14.6 107 1-118 80-198 (622)
381 2ifg_A High affinity nerve gro 99.2 1.8E-11 6.2E-16 129.9 9.8 103 6-116 12-118 (347)
382 4ay9_X Follicle-stimulating ho 99.2 2E-11 6.8E-16 129.8 9.7 130 2-136 30-167 (350)
383 1jl5_A Outer protein YOPM; leu 99.2 1.1E-10 3.9E-15 128.4 14.1 118 3-137 92-209 (454)
384 1nd4_A Aminoglycoside 3'-phosp 99.1 6.3E-11 2.2E-15 119.9 7.5 136 376-524 21-213 (264)
385 2ca6_A RAN GTPase-activating p 99.1 3.4E-12 1.1E-16 137.7 -2.1 130 2-136 159-316 (386)
386 2ast_B S-phase kinase-associat 99.1 6.5E-12 2.2E-16 132.5 -1.0 128 2-134 70-206 (336)
387 2ca6_A RAN GTPase-activating p 99.1 7.3E-12 2.5E-16 135.0 -2.5 131 1-136 59-229 (386)
388 3goz_A Leucine-rich repeat-con 99.0 2.3E-11 7.8E-16 130.0 -0.3 133 3-136 23-180 (362)
389 2ast_B S-phase kinase-associat 99.0 5E-12 1.7E-16 133.4 -5.7 130 1-135 92-234 (336)
390 4ay9_X Follicle-stimulating ho 99.0 9.9E-10 3.4E-14 116.7 11.3 130 2-138 79-217 (350)
391 3goz_A Leucine-rich repeat-con 99.0 4.5E-11 1.6E-15 127.7 0.3 134 3-137 52-210 (362)
392 3dxp_A Putative acyl-COA dehyd 99.0 8.8E-10 3E-14 117.4 10.0 142 379-525 42-248 (359)
393 3sg8_A APH(2'')-ID; antibiotic 98.9 1.9E-09 6.4E-14 112.1 8.8 192 380-583 25-287 (304)
394 1z7x_W Ribonuclease inhibitor; 98.9 3.4E-11 1.2E-15 132.8 -5.9 88 49-136 314-411 (461)
395 1z7x_W Ribonuclease inhibitor; 98.8 1.2E-10 4.1E-15 128.4 -4.9 135 2-136 28-183 (461)
396 3sb4_A Hypothetical leucine ri 98.7 1.8E-08 6.2E-13 105.8 8.4 131 1-133 48-260 (329)
397 3un9_A NLR family member X1; l 98.6 7.7E-10 2.6E-14 118.3 -5.5 36 3-38 73-114 (372)
398 3sb4_A Hypothetical leucine ri 98.6 9.1E-08 3.1E-12 100.4 9.8 129 1-138 100-312 (329)
399 3d1u_A Putative fructosamine-3 98.6 1.9E-07 6.5E-12 95.9 11.2 76 379-458 19-97 (288)
400 3un9_A NLR family member X1; l 98.6 1.1E-09 3.9E-14 117.0 -6.3 130 2-136 101-252 (372)
401 3r70_A Aminoglycoside phosphot 98.6 3.6E-07 1.2E-11 95.4 13.0 136 376-525 38-237 (320)
402 4gkh_A Aminoglycoside 3'-phosp 98.4 1.5E-06 5.2E-11 88.2 13.3 135 381-524 30-222 (272)
403 3tdw_A Gentamicin resistance p 98.4 2.5E-06 8.4E-11 88.5 14.7 136 380-525 24-224 (306)
404 3ovc_A Hygromycin-B 4-O-kinase 98.3 5E-06 1.7E-10 88.3 12.6 142 378-525 44-243 (362)
405 3ogk_B Coronatine-insensitive 98.2 1.7E-07 5.9E-12 106.5 1.0 94 4-98 140-245 (592)
406 3ogk_B Coronatine-insensitive 98.2 2.6E-07 8.8E-12 105.0 0.6 132 1-138 377-528 (592)
407 3rfe_A Platelet glycoprotein I 98.2 1.3E-06 4.6E-11 78.0 4.9 68 76-150 12-82 (130)
408 3ats_A Putative uncharacterize 98.1 1.7E-06 5.8E-11 91.7 6.1 80 380-459 25-121 (357)
409 3rw6_A Nuclear RNA export fact 98.1 8.7E-07 3E-11 89.3 3.4 82 7-90 148-238 (267)
410 3rw6_A Nuclear RNA export fact 98.1 1.5E-06 5E-11 87.6 4.5 113 11-129 125-257 (267)
411 1io0_A Tropomodulin; LRR prote 98.0 2.1E-07 7.2E-12 88.9 -3.1 111 21-136 32-164 (185)
412 4fdw_A Leucine rich hypothetic 98.0 1.6E-05 5.5E-10 85.5 9.6 122 3-136 158-284 (401)
413 2olc_A MTR kinase, methylthior 98.0 2.5E-05 8.4E-10 84.0 10.7 75 380-456 35-120 (397)
414 3f7w_A Putative fructosamine-3 97.9 3.1E-05 1.1E-09 79.3 10.8 79 376-458 16-97 (288)
415 2p1m_B Transport inhibitor res 97.9 3.4E-07 1.1E-11 104.1 -4.5 33 24-56 371-405 (594)
416 2ra8_A Uncharacterized protein 97.9 3.1E-06 1.1E-10 89.6 2.7 14 22-35 169-182 (362)
417 4fdw_A Leucine rich hypothetic 97.9 2.1E-05 7.2E-10 84.6 9.2 120 1-131 179-308 (401)
418 2q83_A YTAA protein; 2635576, 97.9 5.5E-05 1.9E-09 79.2 11.8 140 380-524 37-251 (346)
419 3jr1_A Putative fructosamine-3 97.8 0.00012 3.9E-09 75.8 12.1 138 379-521 40-232 (312)
420 1io0_A Tropomodulin; LRR prote 97.8 1.4E-06 4.7E-11 83.2 -2.4 109 2-115 36-165 (185)
421 2p1m_B Transport inhibitor res 97.8 1.3E-06 4.5E-11 99.1 -3.3 131 1-133 65-221 (594)
422 2ra8_A Uncharacterized protein 97.6 7.6E-06 2.6E-10 86.6 -0.1 132 1-136 171-320 (362)
423 2pyw_A Uncharacterized protein 97.5 0.00031 1.1E-08 76.0 11.3 73 380-455 39-122 (420)
424 3csv_A Aminoglycoside phosphot 97.3 0.00061 2.1E-08 71.1 9.8 141 380-525 23-217 (333)
425 3rfe_A Platelet glycoprotein I 97.2 0.0005 1.7E-08 61.1 6.4 57 28-85 11-68 (130)
426 2ppq_A HSK, HK, homoserine kin 97.2 0.0016 5.4E-08 67.4 11.1 157 365-524 7-216 (322)
427 1zyl_A Hypothetical protein YI 97.0 0.0054 1.8E-07 63.5 13.5 142 380-525 31-223 (328)
428 3dxq_A Choline/ethanolamine ki 96.9 0.0021 7.1E-08 65.9 9.0 71 380-458 23-95 (301)
429 1nw1_A Choline kinase (49.2 KD 96.9 0.0022 7.6E-08 69.4 8.9 73 380-458 78-159 (429)
430 3feg_A Choline/ethanolamine ki 96.8 0.0022 7.4E-08 68.0 8.4 140 380-524 55-253 (379)
431 3e4g_A ATP synthase subunit S, 96.7 0.00031 1.1E-08 65.6 0.3 82 26-112 62-150 (176)
432 2qg7_A Ethanolamine kinase PV0 96.6 0.014 4.7E-07 63.6 12.9 74 380-458 113-188 (458)
433 3i1a_A Spectinomycin phosphotr 96.4 0.011 3.8E-07 61.6 10.3 31 495-525 206-236 (339)
434 4h09_A Hypothetical leucine ri 96.3 0.012 4E-07 62.4 10.2 119 3-131 218-341 (379)
435 3e4g_A ATP synthase subunit S, 96.3 0.00075 2.5E-08 63.0 0.6 92 40-134 52-150 (176)
436 3c5i_A Choline kinase; choline 96.3 0.0037 1.3E-07 66.1 6.1 73 380-457 38-120 (369)
437 4gt6_A Cell surface protein; l 96.3 0.0062 2.1E-07 65.0 7.8 106 20-135 260-369 (394)
438 4fs7_A Uncharacterized protein 96.3 0.0064 2.2E-07 64.9 7.7 42 2-46 71-113 (394)
439 1pgv_A TMD-1, tropomodulin TMD 96.1 0.00036 1.2E-08 66.5 -2.9 37 49-85 71-111 (197)
440 4h09_A Hypothetical leucine ri 96.0 0.012 4E-07 62.3 7.9 104 2-116 240-347 (379)
441 4fs7_A Uncharacterized protein 96.0 0.017 5.9E-07 61.5 9.2 75 49-132 298-375 (394)
442 4gt6_A Cell surface protein; l 95.8 0.0095 3.3E-07 63.5 6.2 122 2-135 265-390 (394)
443 4b9d_A Serine/threonine-protei 95.8 0.00092 3.1E-08 70.0 -1.8 59 630-690 221-283 (350)
444 3f2s_A CK, chetk-alpha, cholin 95.5 0.034 1.2E-06 59.1 8.9 141 380-524 57-279 (401)
445 3fdn_A Serine/threonine-protei 95.4 0.002 6.9E-08 65.0 -0.8 63 630-692 203-266 (279)
446 2yle_A Protein spire homolog 1 95.3 0.11 3.6E-06 49.8 10.6 103 456-582 33-135 (229)
447 2k1k_A Ephrin type-A receptor 95.2 0.0057 2E-07 40.8 1.3 30 305-334 5-34 (38)
448 2h6d_A 5'-AMP-activated protei 94.9 0.0016 5.5E-08 65.5 -3.4 63 630-692 207-270 (276)
449 2vgo_A Serine/threonine-protei 94.3 0.0064 2.2E-07 61.4 -0.6 63 630-692 208-271 (284)
450 3mes_A Choline kinase; malaria 94.2 0.19 6.4E-06 53.9 10.5 74 380-458 75-157 (424)
451 2wtk_C Serine/threonine-protei 94.0 0.0059 2E-07 62.3 -1.7 63 630-692 209-272 (305)
452 1zy4_A Serine/threonine-protei 93.9 0.0063 2.1E-07 61.8 -1.5 31 660-690 260-290 (303)
453 3qd2_B Eukaryotic translation 93.5 0.0049 1.7E-07 63.6 -3.3 28 662-689 304-331 (332)
454 3fme_A Dual specificity mitoge 93.5 0.0026 8.9E-08 64.4 -5.4 31 614-644 236-266 (290)
455 3m2w_A MAP kinase-activated pr 93.4 0.0027 9.1E-08 64.9 -5.5 33 660-692 233-265 (299)
456 1pgv_A TMD-1, tropomodulin TMD 93.0 0.0085 2.9E-07 56.9 -2.2 84 49-133 42-136 (197)
457 3dls_A PAS domain-containing s 92.9 0.0096 3.3E-07 62.0 -2.3 30 662-691 253-282 (335)
458 3com_A Serine/threonine-protei 92.6 0.026 8.9E-07 57.7 0.7 34 659-692 254-287 (314)
459 2clq_A Mitogen-activated prote 92.5 0.013 4.6E-07 59.2 -1.7 30 662-691 257-286 (295)
460 3fhr_A MAP kinase-activated pr 92.4 0.0032 1.1E-07 65.6 -6.7 33 660-692 264-296 (336)
461 2w5a_A Serine/threonine-protei 92.2 0.024 8.4E-07 56.7 -0.3 62 631-692 213-276 (279)
462 3dbq_A Dual specificity protei 92.0 0.01 3.5E-07 61.9 -3.5 33 659-691 249-281 (343)
463 3a99_A Proto-oncogene serine/t 91.8 0.015 5E-07 60.0 -2.5 31 662-692 272-302 (320)
464 3cek_A Dual specificity protei 91.6 0.011 3.7E-07 60.7 -3.8 31 662-692 271-301 (313)
465 3an0_A Dual specificity mitoge 91.6 0.0079 2.7E-07 62.5 -4.9 34 662-695 289-322 (340)
466 2iwi_A Serine/threonine-protei 91.5 0.019 6.4E-07 58.8 -2.0 31 662-692 262-292 (312)
467 2x7f_A TRAF2 and NCK-interacti 90.6 0.014 4.6E-07 60.2 -4.2 30 662-691 265-294 (326)
468 3a7i_A MST3 kinase, serine/thr 90.3 0.043 1.5E-06 55.7 -0.6 34 659-692 246-279 (303)
469 3aln_A Dual specificity mitoge 90.3 0.011 3.7E-07 61.1 -5.3 31 660-690 262-292 (327)
470 2zmd_A Dual specificity protei 90.3 0.019 6.4E-07 61.2 -3.5 33 659-691 296-328 (390)
471 2dyl_A Dual specificity mitoge 90.2 0.021 7.3E-07 58.4 -3.1 33 658-690 258-290 (318)
472 2ks1_B Epidermal growth factor 90.1 0.21 7.1E-06 34.4 2.8 7 316-322 13-19 (44)
473 2l2t_A Receptor tyrosine-prote 89.9 0.14 4.8E-06 35.1 1.9 7 316-322 12-18 (44)
474 1u5q_A Serine/threonine protei 89.8 0.035 1.2E-06 58.0 -1.9 34 659-692 281-314 (348)
475 3g15_A CK, chetk-alpha, cholin 89.4 0.94 3.2E-05 48.0 9.0 28 497-524 246-279 (401)
476 2jwa_A Receptor tyrosine-prote 89.1 0.17 5.9E-06 34.6 1.8 27 312-339 13-39 (44)
477 3dzo_A Rhoptry kinase domain; 86.9 0.027 9.2E-07 60.4 -5.2 35 655-689 335-369 (413)
478 3qup_A Tyrosine-protein kinase 82.1 0.13 4.4E-06 52.7 -2.5 35 658-692 266-307 (323)
479 4euu_A Serine/threonine-protei 80.2 0.11 3.7E-06 53.2 -3.9 26 660-685 279-304 (319)
480 4ann_A ESSB; membrane protein, 78.8 4.7 0.00016 38.3 7.4 115 429-584 43-158 (215)
481 4fvq_A Tyrosine-protein kinase 77.5 0.41 1.4E-05 47.8 -0.4 50 635-684 220-269 (289)
482 1q8y_A SR protein kinase; tran 76.1 1.5 5.3E-05 45.4 3.6 33 612-644 301-333 (373)
483 4ano_A ESSB; membrane protein, 73.9 7.6 0.00026 37.0 7.4 115 429-584 48-163 (219)
484 3hyh_A Carbon catabolite-derep 73.3 1.1 3.6E-05 44.9 1.3 28 617-644 235-262 (275)
485 3cxl_A N-chimerin; SH2, RHO-GA 73.2 0.35 1.2E-05 52.5 -2.4 60 379-441 146-214 (463)
486 1z57_A Dual specificity protei 72.7 1.8 6.3E-05 43.9 3.1 32 613-644 297-328 (339)
487 1wak_A Serine/threonine-protei 72.6 1.8 6.1E-05 45.2 3.0 28 662-689 370-397 (397)
488 2k9y_A Ephrin type-A receptor 71.2 1.7 5.7E-05 29.4 1.5 16 313-328 12-27 (41)
489 2eue_A Carbon catabolite derep 70.8 1.2 4.2E-05 43.9 1.2 28 617-644 235-262 (275)
490 4g3f_A NF-kappa-beta-inducing 70.3 0.46 1.6E-05 49.1 -2.2 37 655-691 281-330 (336)
491 3fxz_A Serine/threonine-protei 69.8 1.4 4.9E-05 44.2 1.4 29 616-644 241-269 (297)
492 2ks1_B Epidermal growth factor 69.3 3.1 0.00011 28.5 2.5 31 309-339 9-39 (44)
493 3fpq_A Serine/threonine-protei 68.4 2.1 7.3E-05 43.0 2.3 26 619-644 257-282 (290)
494 2vx3_A Dual specificity tyrosi 68.1 3 0.0001 43.5 3.6 30 662-691 351-380 (382)
495 2eu9_A Dual specificity protei 67.9 2.7 9.2E-05 43.0 3.1 31 614-644 303-333 (355)
496 2j7t_A Serine/threonine-protei 66.8 2.2 7.5E-05 42.6 2.1 29 616-644 247-275 (302)
497 4agu_A Cyclin-dependent kinase 66.6 3.1 0.0001 41.8 3.1 28 617-644 257-284 (311)
498 3is5_A Calcium-dependent prote 66.0 3.3 0.00011 41.1 3.2 26 619-644 253-278 (285)
499 2vwi_A Serine/threonine-protei 65.0 1.7 5.8E-05 43.4 0.8 34 611-644 254-287 (303)
500 3gni_B Strad alpha; kinase fol 64.6 2.1 7.2E-05 44.8 1.5 33 612-644 301-333 (389)
No 1
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=3.6e-55 Score=455.89 Aligned_cols=262 Identities=30% Similarity=0.488 Sum_probs=222.8
Q ss_pred cCCCccceEeeeCceEEEEEEeC------CCcEEEEEEeccCChhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEE
Q 005224 375 NNFNSSTQIGQGGYGKVYKGILP------DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 448 (707)
Q Consensus 375 ~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~l 448 (707)
++|...+.||+|+||+||+|++. +++.||||+++.......++|.+|+++|++++|||||+++|+|.+++..+|
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 92 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM 92 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEE
Confidence 56778899999999999999863 478899999988776667889999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhcC-----------CCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEE
Q 005224 449 VYEFMSNGTLRDQLSAKS-----------KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKV 517 (707)
Q Consensus 449 V~E~~~~gsL~~~l~~~~-----------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl 517 (707)
|||||++|+|.++|+..+ ...++|..++.|+.|||+||+|||+++ ||||||||+|||+++++.+||
T Consensus 93 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~---iiHRDlKp~NILl~~~~~~Ki 169 (299)
T 4asz_A 93 VFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQH---FVHRDLATRNCLVGENLLVKI 169 (299)
T ss_dssp EEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEE
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCccCHhhEEECCCCcEEE
Confidence 999999999999997632 356999999999999999999999998 999999999999999999999
Q ss_pred eeecccccCCCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc-CCCCCCCCchhHHHHHHH
Q 005224 518 ADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIA 596 (707)
Q Consensus 518 ~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~ellt-G~~pf~~~~~~~~~~~~~ 596 (707)
+|||+|+.....+. ........||+.|||||++.+..|+.++|||||||++|||+| |+.||...... +.
T Consensus 170 ~DFGla~~~~~~~~-----~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~-~~---- 239 (299)
T 4asz_A 170 GDFGMSRDVYSTDY-----YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNN-EV---- 239 (299)
T ss_dssp CCCSCHHHHTGGGC-----EEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHH-HH----
T ss_pred CCcccceecCCCCc-----eeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHH-HH----
Confidence 99999986543221 122234568999999999999999999999999999999999 89999764431 11
Q ss_pred hhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCC
Q 005224 597 YQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMP 654 (707)
Q Consensus 597 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~ 654 (707)
...+..+.....|..++.++.+++.+||+.+|++|||+.++.+.|+++.+..|
T Consensus 240 -----~~~i~~~~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~~p 292 (299)
T 4asz_A 240 -----IECITQGRVLQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKASP 292 (299)
T ss_dssp -----HHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHSC
T ss_pred -----HHHHHcCCCCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhcCC
Confidence 12233344556677888999999999999999999999999999999877654
No 2
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=1.9e-54 Score=456.74 Aligned_cols=262 Identities=29% Similarity=0.492 Sum_probs=216.6
Q ss_pred cCCCccceEeeeCceEEEEEEeC------CCcEEEEEEeccCChhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEE
Q 005224 375 NNFNSSTQIGQGGYGKVYKGILP------DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 448 (707)
Q Consensus 375 ~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~l 448 (707)
++|...++||+|+||+||+|+++ +++.||||+++.......++|.+|+++|++++|||||+++|+|.+.+..+|
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 120 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLM 120 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence 45667889999999999999864 478999999988776667889999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhcC-------------CCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcE
Q 005224 449 VYEFMSNGTLRDQLSAKS-------------KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTA 515 (707)
Q Consensus 449 V~E~~~~gsL~~~l~~~~-------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ 515 (707)
|||||++|+|.++++... ..+++|..++.|+.|||+||+|||+.+ ||||||||+|||+++++.+
T Consensus 121 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~---iiHRDLKp~NILl~~~~~~ 197 (329)
T 4aoj_A 121 VFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLH---FVHRDLATRNCLVGQGLVV 197 (329)
T ss_dssp EEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEETTTEE
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCC---eecccccHhhEEECCCCcE
Confidence 999999999999997642 246999999999999999999999998 9999999999999999999
Q ss_pred EEeeecccccCCCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc-CCCCCCCCchhHHHHH
Q 005224 516 KVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVN 594 (707)
Q Consensus 516 kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~ellt-G~~pf~~~~~~~~~~~ 594 (707)
||+|||+|+.....+. ........||+.|||||++.+..++.++|||||||++|||+| |+.||...... +..
T Consensus 198 Ki~DFGla~~~~~~~~-----~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~-~~~- 270 (329)
T 4aoj_A 198 KIGDFGMSRDIYSTDY-----YRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNT-EAI- 270 (329)
T ss_dssp EECCCC---------------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHH-HHH-
T ss_pred EEcccccceeccCCCc-----ceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHH-HHH-
Confidence 9999999987643321 122344679999999999999999999999999999999999 89999765432 111
Q ss_pred HHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCC
Q 005224 595 IAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMP 654 (707)
Q Consensus 595 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~ 654 (707)
..+..+.....|..++.++.+++.+||+.+|++|||+.++++.|+.+.+..|
T Consensus 271 --------~~i~~g~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~pp 322 (329)
T 4aoj_A 271 --------DCITQGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQAPP 322 (329)
T ss_dssp --------HHHHHTCCCCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHSCC
T ss_pred --------HHHHcCCCCCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhCCc
Confidence 1222344455677888999999999999999999999999999999876543
No 3
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=1.4e-54 Score=457.17 Aligned_cols=260 Identities=22% Similarity=0.379 Sum_probs=214.6
Q ss_pred cCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEecC
Q 005224 375 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 453 (707)
Q Consensus 375 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E~~ 453 (707)
+.|+..++||+|+||+||+|+.+ +|+.||||++........+.+.+|+++|+.++|||||+++++|.+++..|||||||
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~ 153 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 153 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCC
Confidence 46888999999999999999975 79999999997655445567899999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCCC
Q 005224 454 SNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEG 533 (707)
Q Consensus 454 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 533 (707)
++|+|.+++... .+++..++.++.||+.||+|||+++ ||||||||+|||++.++.+||+|||+|+......
T Consensus 154 ~gg~L~~~l~~~---~l~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~--- 224 (346)
T 4fih_A 154 EGGALTDIVTHT---RMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV--- 224 (346)
T ss_dssp TTEEHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEECCSSS---
T ss_pred CCCcHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---cccccCCHHHEEECCCCCEEEecCcCceecCCCC---
Confidence 999999999753 4999999999999999999999999 9999999999999999999999999998764321
Q ss_pred ccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCCCCCC
Q 005224 534 IVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSY 613 (707)
Q Consensus 534 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 613 (707)
......+||+.|||||++.+..|+.++|||||||++|||++|+.||...... +.
T Consensus 225 ----~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~-~~--------------------- 278 (346)
T 4fih_A 225 ----PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL-KA--------------------- 278 (346)
T ss_dssp ----CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH-HH---------------------
T ss_pred ----CcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH-HH---------------------
Confidence 2234568999999999999999999999999999999999999999653321 11
Q ss_pred ChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCCCCCCCCCCCCC
Q 005224 614 PSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSSDVSG 693 (707)
Q Consensus 614 ~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f~~~~~~ 693 (707)
.+.+..... | .-+. ....++.+.|||.+||+.||++|+|++|+|+||||......
T Consensus 279 --------~~~i~~~~~--~-~~~~--------------~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~Hp~~~~~~~p 333 (346)
T 4fih_A 279 --------MKMIRDNLP--P-RLKN--------------LHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPP 333 (346)
T ss_dssp --------HHHHHHSSC--C-CCSC--------------GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGCCCG
T ss_pred --------HHHHHcCCC--C-CCCc--------------cccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhcCCCCC
Confidence 111111110 0 0000 01123344579999999999999999999999999876543
Q ss_pred C
Q 005224 694 S 694 (707)
Q Consensus 694 ~ 694 (707)
+
T Consensus 334 ~ 334 (346)
T 4fih_A 334 A 334 (346)
T ss_dssp G
T ss_pred c
Confidence 3
No 4
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=2.3e-54 Score=451.73 Aligned_cols=257 Identities=25% Similarity=0.414 Sum_probs=216.3
Q ss_pred CCCccceEeeeCceEEEEEEeC------CCcEEEEEEeccCCh-hhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEE
Q 005224 376 NFNSSTQIGQGGYGKVYKGILP------DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 448 (707)
Q Consensus 376 ~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~l 448 (707)
+++..++||+|+||+||+|.+. +++.||||+++.... ...++|.+|+.++++++|||||+++|+|.+++..+|
T Consensus 27 ~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~l 106 (308)
T 4gt4_A 27 AVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSM 106 (308)
T ss_dssp GEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred HCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEE
Confidence 3456789999999999999963 468999999975432 335789999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhcC--------------CCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCc
Q 005224 449 VYEFMSNGTLRDQLSAKS--------------KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFT 514 (707)
Q Consensus 449 V~E~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~ 514 (707)
|||||++|+|.++|..+. ...++|..++.|+.|||+||+|||+++ ||||||||+||||++++.
T Consensus 107 V~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~---iiHRDLK~~NILl~~~~~ 183 (308)
T 4gt4_A 107 IFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHH---VVHKDLATRNVLVYDKLN 183 (308)
T ss_dssp EEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGC
T ss_pred EEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC---CCCCCccccceEECCCCC
Confidence 999999999999997532 235899999999999999999999998 999999999999999999
Q ss_pred EEEeeecccccCCCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc-CCCCCCCCchhHHHH
Q 005224 515 AKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREV 593 (707)
Q Consensus 515 ~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~ellt-G~~pf~~~~~~~~~~ 593 (707)
+||+|||+|+.....+. ........||+.|||||++.++.|+.++|||||||++|||+| |+.||..... .+..
T Consensus 184 ~Ki~DFGlar~~~~~~~-----~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~-~~~~ 257 (308)
T 4gt4_A 184 VKISDLGLFREVYAADY-----YKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN-QDVV 257 (308)
T ss_dssp EEECCSCCBCGGGGGGC-----BCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCH-HHHH
T ss_pred EEECCcccceeccCCCc-----eeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCH-HHHH
Confidence 99999999986543221 122345679999999999999999999999999999999999 8999976543 1111
Q ss_pred HHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhh
Q 005224 594 NIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIW 650 (707)
Q Consensus 594 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~ 650 (707)
..+..+...+.|.+++..+.+++.+||+.+|++||+|.++++.|+.+.
T Consensus 258 ---------~~i~~~~~~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~~ 305 (308)
T 4gt4_A 258 ---------EMIRNRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAWG 305 (308)
T ss_dssp ---------HHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred ---------HHHHcCCCCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhcc
Confidence 122344455677888999999999999999999999999999998653
No 5
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=7.1e-54 Score=445.22 Aligned_cols=258 Identities=20% Similarity=0.313 Sum_probs=212.9
Q ss_pred cCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCC---hhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEE
Q 005224 375 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 450 (707)
Q Consensus 375 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~ 450 (707)
++|++.+.||+|+||+||+|+.. +|+.||||++.... ....+.+.+|+++|++++|||||++++++.+++..|+||
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm 111 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 46999999999999999999965 79999999997532 223467899999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCC
Q 005224 451 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 530 (707)
Q Consensus 451 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~ 530 (707)
|||++|+|.+++.+.+ .+++..++.++.||+.||+|||+++ |+||||||+|||+++++.+||+|||+|+......
T Consensus 112 Ey~~gG~L~~~i~~~~--~l~e~~~~~~~~qi~~al~ylH~~~---IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~ 186 (311)
T 4aw0_A 112 SYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 186 (311)
T ss_dssp CCCTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTSCEEECCCTTCEECCTTT
T ss_pred ecCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCCHHHeEEcCCCCEEEEEcCCceecCCCC
Confidence 9999999999997654 4999999999999999999999999 9999999999999999999999999998765322
Q ss_pred CCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCCC
Q 005224 531 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 610 (707)
Q Consensus 531 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 610 (707)
. .......+||+.|||||++.+..|+.++||||+||++|||++|+.||..... .+
T Consensus 187 ~-----~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~-~~------------------- 241 (311)
T 4aw0_A 187 K-----QARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE-GL------------------- 241 (311)
T ss_dssp T-----CCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSH-HH-------------------
T ss_pred C-----cccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH-HH-------------------
Confidence 1 1233456899999999999999999999999999999999999999965332 11
Q ss_pred CCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcC------CCC
Q 005224 611 GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSM------LKH 684 (707)
Q Consensus 611 ~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~------L~H 684 (707)
+.+-+..+ .+. -| ...++++.|||.+||+.||++|+|++|+ ++|
T Consensus 242 ----------~~~~i~~~---~~~-~p----------------~~~s~~~~dli~~lL~~dp~~R~t~~e~~~~~~i~~H 291 (311)
T 4aw0_A 242 ----------IFAKIIKL---EYD-FP----------------EKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAH 291 (311)
T ss_dssp ----------HHHHHHHT---CCC-CC----------------TTCCHHHHHHHHHHSCSSGGGSTTSGGGTCHHHHHTS
T ss_pred ----------HHHHHHcC---CCC-CC----------------cccCHHHHHHHHHHccCCHhHCcChHHHcCCHHHHCC
Confidence 11111111 110 01 1122334578999999999999999996 789
Q ss_pred CCCCCCCC
Q 005224 685 PYVSSDVS 692 (707)
Q Consensus 685 p~f~~~~~ 692 (707)
|||.+-.+
T Consensus 292 p~F~~idw 299 (311)
T 4aw0_A 292 PFFESVTW 299 (311)
T ss_dssp GGGTTCCC
T ss_pred CCcCCCCH
Confidence 99998766
No 6
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=3.4e-53 Score=441.15 Aligned_cols=268 Identities=25% Similarity=0.447 Sum_probs=214.8
Q ss_pred HHHhcCCCccceEeeeCceEEEEEEeCCCcEEEEEEeccCC--hhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEE
Q 005224 371 ALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 448 (707)
Q Consensus 371 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~l 448 (707)
++..++|...++||+|+||+||+|++++ .||||+++... ....+.|.+|+++|++++|||||+++|+|.+ +..+|
T Consensus 32 ei~~~~l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~i 108 (307)
T 3omv_A 32 EIEASEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAI 108 (307)
T ss_dssp BCCTTSCCEEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEE
T ss_pred EEcHHHeEEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEE
Confidence 3445678889999999999999999753 59999987533 3345789999999999999999999998864 56899
Q ss_pred EEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCC
Q 005224 449 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 528 (707)
Q Consensus 449 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~ 528 (707)
|||||++|+|.++|+... ..+++..+..|+.|||+||+|||+++ ||||||||+|||+++++.+||+|||+|+....
T Consensus 109 VmEy~~gGsL~~~l~~~~-~~l~~~~~~~i~~qia~gL~yLH~~~---IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~ 184 (307)
T 3omv_A 109 VTQWCEGSSLYKHLHVQE-TKFQMFQLIDIARQTAQGMDYLHAKN---IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSR 184 (307)
T ss_dssp EEECCSSCBHHHHHHTSC-CCCCHHHHHHHHHHHHHHHHHHHHTT---CBCSCCCSSSEEEETTEEEEECCCSSCBC---
T ss_pred EEEcCCCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCccCHHHEEECCCCcEEEeeccCceeccc
Confidence 999999999999997643 45999999999999999999999998 99999999999999999999999999987543
Q ss_pred CCCCCccccceecccccCCCccchhhhcc---CCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhh
Q 005224 529 PDIEGIVPAHVSTVVKGTPGYLDPEYFLT---HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSV 605 (707)
Q Consensus 529 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~s~~sDVwS~Gvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~ 605 (707)
... ........||+.|||||++.+ ..|+.++|||||||++|||+||+.||....+........ .. ..
T Consensus 185 ~~~-----~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~~-~~----~~ 254 (307)
T 3omv_A 185 WSG-----SQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMV-GR----GY 254 (307)
T ss_dssp --------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHH-HT----TC
T ss_pred CCc-----ceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHHHH-hc----CC
Confidence 221 223345679999999999964 468999999999999999999999997654432221111 11 11
Q ss_pred ccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCC
Q 005224 606 IDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPE 655 (707)
Q Consensus 606 ~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~ 655 (707)
..+.....+.+++..+.+++.+||+.+|++|||+.++++.|+.+...+|+
T Consensus 255 ~~p~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~lpk 304 (307)
T 3omv_A 255 ASPDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSLPK 304 (307)
T ss_dssp CCCCSTTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTTCCC
T ss_pred CCCCcccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhccCCC
Confidence 22233345667888999999999999999999999999999988776654
No 7
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=2.6e-53 Score=458.42 Aligned_cols=260 Identities=22% Similarity=0.375 Sum_probs=215.8
Q ss_pred cCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEecC
Q 005224 375 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 453 (707)
Q Consensus 375 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E~~ 453 (707)
+.|+..++||+|+||+||+|..+ +|+.||||++........+.+.+|+++|+.++|||||+++++|.+.+..|||||||
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~ 230 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 230 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCC
Confidence 56999999999999999999975 79999999997655555667899999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCCC
Q 005224 454 SNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEG 533 (707)
Q Consensus 454 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 533 (707)
++|+|.+++... .+++..+..++.||+.||+|||+++ ||||||||+|||++.++.+||+|||+|+......
T Consensus 231 ~gG~L~~~i~~~---~l~e~~~~~~~~qil~aL~ylH~~~---IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~--- 301 (423)
T 4fie_A 231 EGGALTDIVTHT---RMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV--- 301 (423)
T ss_dssp TTEEHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSTTTEEECTTCCEEECCCTTCEECCSSC---
T ss_pred CCCcHHHHHhcc---CCCHHHHHHHHHHHHHHHHHHHHCC---eecccCCHHHEEEcCCCCEEEecCccceECCCCC---
Confidence 999999999653 4899999999999999999999999 9999999999999999999999999998764321
Q ss_pred ccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCCCCCC
Q 005224 534 IVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSY 613 (707)
Q Consensus 534 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 613 (707)
......+||+.|||||++.+..|+.++|||||||++|||++|+.||...... +
T Consensus 302 ----~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~-~---------------------- 354 (423)
T 4fie_A 302 ----PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL-K---------------------- 354 (423)
T ss_dssp ----CCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH-H----------------------
T ss_pred ----ccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH-H----------------------
Confidence 2234568999999999999999999999999999999999999999643321 1
Q ss_pred ChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCCCCCCCCCCCCC
Q 005224 614 PSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSSDVSG 693 (707)
Q Consensus 614 ~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f~~~~~~ 693 (707)
+.+.+........ ......++.+.|||.+||+.||++|+|++|+|+||||......
T Consensus 355 -------~~~~i~~~~~~~~-----------------~~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~Hp~~~~~~~p 410 (423)
T 4fie_A 355 -------AMKMIRDNLPPRL-----------------KNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPP 410 (423)
T ss_dssp -------HHHHHHHSCCCCC-----------------SCTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGCCCG
T ss_pred -------HHHHHHcCCCCCC-----------------cccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHHhcCCCCC
Confidence 1111111110000 0111223345689999999999999999999999999875543
Q ss_pred C
Q 005224 694 S 694 (707)
Q Consensus 694 ~ 694 (707)
+
T Consensus 411 ~ 411 (423)
T 4fie_A 411 A 411 (423)
T ss_dssp G
T ss_pred c
Confidence 3
No 8
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=2.1e-52 Score=439.45 Aligned_cols=255 Identities=21% Similarity=0.283 Sum_probs=208.9
Q ss_pred cCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEecC
Q 005224 375 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 453 (707)
Q Consensus 375 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E~~ 453 (707)
+.|+..++||+|+||+||+|+.+ +|+.||||+++.... ..+|+.+++.++|||||++++++.+++..|||||||
T Consensus 58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~ 132 (336)
T 4g3f_A 58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELL 132 (336)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEecc
Confidence 46778899999999999999975 799999999976432 246999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCC-cEEEeeecccccCCCCCCC
Q 005224 454 SNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKF-TAKVADFGLSRLAPVPDIE 532 (707)
Q Consensus 454 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~-~~kl~DFGla~~~~~~~~~ 532 (707)
++|+|.++++..+ .+++..++.++.||+.||+|||+++ ||||||||+|||++.++ ++||+|||+|+........
T Consensus 133 ~gg~L~~~l~~~~--~l~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~ 207 (336)
T 4g3f_A 133 EGGSLGQLIKQMG--CLPEDRALYYLGQALEGLEYLHTRR---ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLG 207 (336)
T ss_dssp TTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTTT---EECSCCCGGGEEECTTSCCEEECCCTTCEEC------
T ss_pred CCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---ceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCcc
Confidence 9999999997654 5999999999999999999999999 99999999999999987 6999999999876543211
Q ss_pred CccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCC--C
Q 005224 533 GIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGN--M 610 (707)
Q Consensus 533 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 610 (707)
.. .......+||+.|||||++.+..|+.++|||||||++|||+||+.||...... .....+.... .
T Consensus 208 ~~--~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~----------~~~~~i~~~~~~~ 275 (336)
T 4g3f_A 208 KS--LLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRG----------PLCLKIASEPPPI 275 (336)
T ss_dssp --------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCS----------CCHHHHHHSCCGG
T ss_pred cc--eecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHH----------HHHHHHHcCCCCc
Confidence 10 11223457999999999999999999999999999999999999999753321 0111111111 1
Q ss_pred CCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 005224 611 GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 651 (707)
Q Consensus 611 ~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~ 651 (707)
...+..++..+.+++.+||+.||.+|||+.|+++.+.....
T Consensus 276 ~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~ 316 (336)
T 4g3f_A 276 REIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQ 316 (336)
T ss_dssp GGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred hhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHh
Confidence 23456677889999999999999999999999998876543
No 9
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=9.6e-53 Score=443.94 Aligned_cols=250 Identities=24% Similarity=0.377 Sum_probs=208.9
Q ss_pred cCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCC--hhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEe
Q 005224 375 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 451 (707)
Q Consensus 375 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E 451 (707)
++|++.+.||+|+||+||+|+.. +|+.||||++.... ....+.+.+|+++|++++|||||++++++.+++..|||||
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmE 103 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD 103 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEe
Confidence 68999999999999999999965 79999999997543 2335679999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCC
Q 005224 452 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 531 (707)
Q Consensus 452 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 531 (707)
||++|+|.++|..+....+++..++.++.||+.||+|||+++ ||||||||+|||+++++.+||+|||+|+.....
T Consensus 104 y~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~-- 178 (350)
T 4b9d_A 104 YCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRK---ILHRDIKSQNIFLTKDGTVQLGDFGIARVLNST-- 178 (350)
T ss_dssp CCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT---CEETTCCGGGEEECTTCCEEECSTTEESCCCHH--
T ss_pred CCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCCHHHEEECCCCCEEEcccccceeecCC--
Confidence 999999999998776677899999999999999999999999 999999999999999999999999999865321
Q ss_pred CCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCCCC
Q 005224 532 EGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 611 (707)
Q Consensus 532 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 611 (707)
.......+||+.|||||++.+..|+.++|||||||++|||++|+.||..... .+... .+..+...
T Consensus 179 -----~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~-~~~~~---------~i~~~~~~ 243 (350)
T 4b9d_A 179 -----VELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSM-KNLVL---------KIISGSFP 243 (350)
T ss_dssp -----HHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH-HHHHH---------HHHHTCCC
T ss_pred -----cccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH-HHHHH---------HHHcCCCC
Confidence 1223456799999999999999999999999999999999999999975443 22221 22233334
Q ss_pred CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005224 612 SYPSECVEKFIKLALKCCQDETDARPSMSEVMR 644 (707)
Q Consensus 612 ~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~ 644 (707)
..+..++.++.+++.+||+.||++|||+.|+++
T Consensus 244 ~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 276 (350)
T 4b9d_A 244 PVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILE 276 (350)
T ss_dssp CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred CCCccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 455666778899999999999999999999875
No 10
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=4.9e-53 Score=433.02 Aligned_cols=254 Identities=22% Similarity=0.320 Sum_probs=196.3
Q ss_pred cCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCCh---hhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEE
Q 005224 375 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 450 (707)
Q Consensus 375 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~ 450 (707)
++|++.+.||+|+||+||+|... +|+.||||++..... ...+.+.+|+++|++++|||||++++++.+++..++||
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm 92 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence 68999999999999999999964 799999999875432 23467999999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCC
Q 005224 451 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 530 (707)
Q Consensus 451 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~ 530 (707)
||+ +|+|.+++..++ .+++..++.++.||+.||+|||+++ |+||||||+|||+++++.+||+|||+|+.....
T Consensus 93 Ey~-~g~L~~~l~~~~--~l~e~~~~~~~~qi~~al~ylH~~~---IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~- 165 (275)
T 3hyh_A 93 EYA-GNELFDYIVQRD--KMSEQEARRFFQQIISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG- 165 (275)
T ss_dssp ECC-CEEHHHHHHHSC--SCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCTTTEEECTTCCEEECCSSCC-------
T ss_pred eCC-CCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---cccccCChHHeEECCCCCEEEeecCCCeecCCC-
Confidence 999 689999997653 5999999999999999999999999 999999999999999999999999999865432
Q ss_pred CCCccccceecccccCCCccchhhhccCCC-CCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCC
Q 005224 531 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKL-TDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGN 609 (707)
Q Consensus 531 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-s~~sDVwS~Gvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 609 (707)
......+||+.|||||++.+..+ +.++||||+||++|||+||+.||..... ..
T Consensus 166 -------~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~-~~------------------ 219 (275)
T 3hyh_A 166 -------NFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESI-PV------------------ 219 (275)
T ss_dssp ----------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-HH------------------
T ss_pred -------CccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCH-HH------------------
Confidence 22345689999999999998876 5799999999999999999999964322 11
Q ss_pred CCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCCCCCCCCC
Q 005224 610 MGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSS 689 (707)
Q Consensus 610 ~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f~~ 689 (707)
+.+.+..+.-.-| ...++.+.+||.+||+.||++|+|++|+|+||||..
T Consensus 220 -----------~~~~i~~~~~~~p--------------------~~~s~~~~~li~~~L~~dP~~R~s~~eil~hpw~k~ 268 (275)
T 3hyh_A 220 -----------LFKNISNGVYTLP--------------------KFLSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFKV 268 (275)
T ss_dssp -----------HHHHHHHTCCCCC--------------------TTSCHHHHHHHHHHSCSSGGGSCCHHHHHHCHHHHT
T ss_pred -----------HHHHHHcCCCCCC--------------------CCCCHHHHHHHHHHccCChhHCcCHHHHHcCccccc
Confidence 1111111110001 011233457899999999999999999999999987
Q ss_pred CCC
Q 005224 690 DVS 692 (707)
Q Consensus 690 ~~~ 692 (707)
+..
T Consensus 269 ~~p 271 (275)
T 3hyh_A 269 DLP 271 (275)
T ss_dssp TCC
T ss_pred CCC
Confidence 653
No 11
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=1.5e-52 Score=433.05 Aligned_cols=253 Identities=26% Similarity=0.428 Sum_probs=199.5
Q ss_pred CccceEeeeCceEEEEEEeC-CCcEEEEEEeccCC--hhhHHHHHHHHHHHHccCCCcceeEEEEEEe----CCeEEEEE
Q 005224 378 NSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE----EGEQMLVY 450 (707)
Q Consensus 378 ~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~----~~~~~lV~ 450 (707)
...++||+|+||+||+|.+. +++.||||++.... ....+.|.+|+++|++++|||||+++++|.+ ++..+|||
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm 108 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 108 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence 45678999999999999975 68999999986532 3335679999999999999999999999865 34589999
Q ss_pred ecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcC-CCcEEEeeecccccCCCC
Q 005224 451 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDH-KFTAKVADFGLSRLAPVP 529 (707)
Q Consensus 451 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~-~~~~kl~DFGla~~~~~~ 529 (707)
|||++|+|.+++.+.. .+++..++.++.||+.||+|||+++ ++||||||||+|||++. ++.+||+|||+|+....
T Consensus 109 Ey~~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~ylH~~~-~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~- 184 (290)
T 3fpq_A 109 ELMTSGTLKTYLKRFK--VMKIKVLRSWCRQILKGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA- 184 (290)
T ss_dssp ECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTSS-SCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCT-
T ss_pred eCCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC-CCEEecccChhheeEECCCCCEEEEeCcCCEeCCC-
Confidence 9999999999997643 5899999999999999999999875 46999999999999984 79999999999986432
Q ss_pred CCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCC
Q 005224 530 DIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGN 609 (707)
Q Consensus 530 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 609 (707)
......+||+.|||||++.+ .|+.++|||||||++|||+||+.||....+........
T Consensus 185 --------~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~~~~i------------- 242 (290)
T 3fpq_A 185 --------SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRV------------- 242 (290)
T ss_dssp --------TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHH-------------
T ss_pred --------CccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHHHHHHH-------------
Confidence 12345689999999999865 69999999999999999999999997544322111110
Q ss_pred CCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCCCCCCCCC
Q 005224 610 MGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSS 689 (707)
Q Consensus 610 ~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f~~ 689 (707)
... .+|.. ......+.+.+||.+||+.||++|||++|+|+||||..
T Consensus 243 ----------------~~~------~~~~~------------~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~Hp~~~~ 288 (290)
T 3fpq_A 243 ----------------TSG------VKPAS------------FDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQE 288 (290)
T ss_dssp ----------------TTT------CCCGG------------GGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC-
T ss_pred ----------------HcC------CCCCC------------CCccCCHHHHHHHHHHccCChhHCcCHHHHhcCccccC
Confidence 000 00100 00011223447888899999999999999999999975
Q ss_pred C
Q 005224 690 D 690 (707)
Q Consensus 690 ~ 690 (707)
.
T Consensus 289 ~ 289 (290)
T 3fpq_A 289 E 289 (290)
T ss_dssp -
T ss_pred C
Confidence 3
No 12
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=1e-53 Score=444.01 Aligned_cols=270 Identities=23% Similarity=0.308 Sum_probs=207.1
Q ss_pred cCCCccceEeeeCceEEEEEEeC----CCcEEEEEEeccCCh--hhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEE
Q 005224 375 NNFNSSTQIGQGGYGKVYKGILP----DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 448 (707)
Q Consensus 375 ~~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~l 448 (707)
++|++.+.||+|+||+||+|+.. +++.||||++..... .....+.+|+++|++++|||||++++++.+++..|+
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i 103 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL 103 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 57999999999999999999852 478999999875322 223468889999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCC
Q 005224 449 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 528 (707)
Q Consensus 449 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~ 528 (707)
|||||++|+|.+++.+.. .+++..++.++.||+.||+|||+++ |+||||||+|||+++++.+||+|||+|+....
T Consensus 104 vmEy~~gg~L~~~l~~~~--~l~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~ 178 (304)
T 3ubd_A 104 ILDFLRGGDLFTRLSKEV--MFTEEDVKFYLAELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESID 178 (304)
T ss_dssp EECCCTTCEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCCGGGEEECTTSCEEEESSEEEEC---
T ss_pred EEEcCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---CcCCCCCHHHeEEcCCCCEEecccccceeccC
Confidence 999999999999997654 5999999999999999999999999 99999999999999999999999999986533
Q ss_pred CCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccC
Q 005224 529 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDG 608 (707)
Q Consensus 529 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 608 (707)
.. ......+||+.|||||++.+..|+.++||||+||++|||+||+.||..... .+..
T Consensus 179 ~~-------~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~-~~~~--------------- 235 (304)
T 3ubd_A 179 HE-------KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDR-KETM--------------- 235 (304)
T ss_dssp ---------CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHH---------------
T ss_pred CC-------ccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCH-HHHH---------------
Confidence 21 223456899999999999999999999999999999999999999965332 1111
Q ss_pred CCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCC-----CcCCC
Q 005224 609 NMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSS-----SSMLK 683 (707)
Q Consensus 609 ~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa-----~e~L~ 683 (707)
+.+..+ .+ ..| ...++.+.|||.+||+.||++|+|| +|+++
T Consensus 236 --------------~~i~~~---~~-~~p----------------~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~ 281 (304)
T 3ubd_A 236 --------------TMILKA---KL-GMP----------------QFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKR 281 (304)
T ss_dssp --------------HHHHHC---CC-CCC----------------TTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHT
T ss_pred --------------HHHHcC---CC-CCC----------------CcCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHc
Confidence 111111 00 001 0112334578888899999999987 58999
Q ss_pred CCCCCCCCCCCCcccccCcccCC
Q 005224 684 HPYVSSDVSGSNLVSGVIPTITP 706 (707)
Q Consensus 684 Hp~f~~~~~~~~~~~~~~~~~~~ 706 (707)
||||++-.+..-.-....||+.|
T Consensus 282 Hp~f~~idw~~l~~~~~~pP~~P 304 (304)
T 3ubd_A 282 HSFFSTIDWNKLYRREIHPPFKP 304 (304)
T ss_dssp SGGGTTCCHHHHHTTCSCCSSCC
T ss_pred CccccCCCHHHHHhCCCCcCcCC
Confidence 99998765422112234466554
No 13
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=8.2e-52 Score=440.09 Aligned_cols=271 Identities=25% Similarity=0.409 Sum_probs=224.9
Q ss_pred cHHHHHHHhcCCCccceEeeeCceEEEEEEeC------CCcEEEEEEeccCChh-hHHHHHHHHHHHHccCC-CcceeEE
Q 005224 366 TYGEMALATNNFNSSTQIGQGGYGKVYKGILP------DGTVVAVKRAQEGSLQ-GEKEFLTEIQFLSRLHH-RNLVSLV 437 (707)
Q Consensus 366 ~~~~l~~~~~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~l~~~~~~-~~~~~~~E~~~l~~l~H-~nIv~l~ 437 (707)
..++++...++|++.+.||+|+||+||+|.+. .++.||||++...... ..+.|.+|+++|++++| ||||+++
T Consensus 55 ~~~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~ 134 (353)
T 4ase_A 55 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLL 134 (353)
T ss_dssp CHHHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred CCcccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEE
Confidence 34567777889999999999999999999863 2468999999865443 35679999999999965 8999999
Q ss_pred EEEEeC-CeEEEEEecCCCCCHHHHHhhcC--------------CCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCC
Q 005224 438 GYCDEE-GEQMLVYEFMSNGTLRDQLSAKS--------------KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDI 502 (707)
Q Consensus 438 ~~~~~~-~~~~lV~E~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dl 502 (707)
|+|.+. +..++|||||++|+|.++|+... ...+++..++.++.|||+||+|||+++ ||||||
T Consensus 135 g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~---iiHRDL 211 (353)
T 4ase_A 135 GACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDL 211 (353)
T ss_dssp EEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTT---CCCSCC
T ss_pred EEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCC---eecCcc
Confidence 999765 56899999999999999997532 345899999999999999999999999 999999
Q ss_pred CCCCEEEcCCCcEEEeeecccccCCCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc-CCC
Q 005224 503 KASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQ 581 (707)
Q Consensus 503 kp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~ellt-G~~ 581 (707)
||+|||+++++.+||+|||+|+....... ........||+.|||||++.+..|+.++|||||||++|||+| |+.
T Consensus 212 K~~NILl~~~~~vKi~DFGlar~~~~~~~-----~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~ 286 (353)
T 4ase_A 212 AARNILLSEKNVVKICDFGLARDIYKDPD-----YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGAS 286 (353)
T ss_dssp SGGGEEECGGGCEEECCCGGGSCTTTCTT-----SEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCC
T ss_pred CccceeeCCCCCEEECcchhhhhcccCCC-----ceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCC
Confidence 99999999999999999999987643321 123345678999999999999999999999999999999998 999
Q ss_pred CCCCCchhHHHHHHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcC
Q 005224 582 PISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMM 653 (707)
Q Consensus 582 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~ 653 (707)
||........... .+..+.....|+.++.++.+++.+||+.+|++|||+.++++.|+.+.+..
T Consensus 287 Pf~~~~~~~~~~~---------~i~~g~~~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq~~ 349 (353)
T 4ase_A 287 PYPGVKIDEEFCR---------RLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 349 (353)
T ss_dssp SSTTCCCSHHHHH---------HHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred CCCCCCHHHHHHH---------HHHcCCCCCCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHHHh
Confidence 9975433211111 12233445567778889999999999999999999999999999886643
No 14
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=6.1e-51 Score=436.14 Aligned_cols=307 Identities=18% Similarity=0.267 Sum_probs=216.0
Q ss_pred HHHHHhcCCCccceEeeeCceEEEEEEeC----CCcEEEEEEeccCChhhHHHHHHHHHHHHcc-CCCcceeEEEEEEeC
Q 005224 369 EMALATNNFNSSTQIGQGGYGKVYKGILP----DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEE 443 (707)
Q Consensus 369 ~l~~~~~~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~ 443 (707)
.+....++|++.++||+|+||+||+|+.+ +++.||||++.... ...++.+|+++|+.+ +||||+++++++.+.
T Consensus 15 ~~p~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~--~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~ 92 (361)
T 4f9c_A 15 AVPQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--HPIRIAAELQCLTVAGGQDNVMGVKYCFRKN 92 (361)
T ss_dssp HSGGGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS--CHHHHHHHHHHHHHTCSBTTBCCCSEEEEET
T ss_pred hcCCccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc--CHHHHHHHHHHHHHhcCCCCCceEEEEEEEC
Confidence 33445688999999999999999999853 46899999986543 345788999999998 699999999999999
Q ss_pred CeEEEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCC-CcEEEeeecc
Q 005224 444 GEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHK-FTAKVADFGL 522 (707)
Q Consensus 444 ~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~-~~~kl~DFGl 522 (707)
++.++||||+++|+|.+++. .+++..++.++.|++.||+|||+++ |+||||||+|||++.+ +.+||+|||+
T Consensus 93 ~~~~lvmE~~~g~~L~~~~~-----~l~~~~~~~~~~qll~al~ylH~~g---IiHRDiKPeNiLl~~~~~~~kl~DFGl 164 (361)
T 4f9c_A 93 DHVVIAMPYLEHESFLDILN-----SLSFQEVREYMLNLFKALKRIHQFG---IVHRDVKPSNFLYNRRLKKYALVDFGL 164 (361)
T ss_dssp TEEEEEEECCCCCCHHHHHT-----TCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEETTTTEEEECCCTT
T ss_pred CEEEEEEeCCCcccHHHHHc-----CCCHHHHHHHHHHHHHHHHHHHHCC---eEeCcCCHHHeEEeCCCCeEEECcCCC
Confidence 99999999999999999983 3899999999999999999999999 9999999999999877 7999999999
Q ss_pred cccCCCCCCCCc---------------------cccceecccccCCCccchhhhccC-CCCCchhhHHHHHHHHHHHcCC
Q 005224 523 SRLAPVPDIEGI---------------------VPAHVSTVVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVFLELLTGM 580 (707)
Q Consensus 523 a~~~~~~~~~~~---------------------~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~sDVwS~Gvll~elltG~ 580 (707)
|+.......... .........+||+.|+|||++.+. .|+.++||||+||++|||++|+
T Consensus 165 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~ 244 (361)
T 4f9c_A 165 AQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGR 244 (361)
T ss_dssp CEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTC
T ss_pred CcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCC
Confidence 986543221100 001122345799999999999875 5899999999999999999999
Q ss_pred CCCCCCchhHHHHHHHhhcccch------hhccC---CCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 005224 581 QPISHGKNIVREVNIAYQSSMMF------SVIDG---NMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 651 (707)
Q Consensus 581 ~pf~~~~~~~~~~~~~~~~~~~~------~~~~~---~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~ 651 (707)
.||..+.+..+.+.......... ..... .....+......+.+.+...-...| ....-.........
T Consensus 245 ~Pf~~~~~~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p----~~~~~~~~~~~~~~ 320 (361)
T 4f9c_A 245 YPFYKASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTP----KLTSDIQGHATNLE 320 (361)
T ss_dssp SSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC-------------------------
T ss_pred CCCCCCCCHHHHHHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhcccccccc----cccccccccccccc
Confidence 99987776555444322110000 00000 0001111111112221111111111 11111111111112
Q ss_pred cCCCCCCCCCccccCCCCCCCCCCCCCCcCCCCCCCCC
Q 005224 652 MMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSS 689 (707)
Q Consensus 652 ~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f~~ 689 (707)
.....++++.|||.+||++||++|+||+|||+||||..
T Consensus 321 ~~~~is~~a~DLl~~lL~~dP~~R~ta~eaL~Hp~f~~ 358 (361)
T 4f9c_A 321 GWNEVPDEAYDLLDKLLDLNPASRITAEEALLHPFFKD 358 (361)
T ss_dssp -CTTCCHHHHHHHHHHTCSCTTTSCCHHHHHTSGGGTT
T ss_pred ccccCCHHHHHHHHHHCcCChhHCcCHHHHhcCcccCC
Confidence 23444566789999999999999999999999999975
No 15
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=9.8e-51 Score=439.19 Aligned_cols=287 Identities=22% Similarity=0.343 Sum_probs=215.1
Q ss_pred cCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCC--hhhHHHHHHHHHHHHccCCCcceeEEEEEEe------CCe
Q 005224 375 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE------EGE 445 (707)
Q Consensus 375 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~------~~~ 445 (707)
++|++.+.||+|+||+||+|... +|+.||||++.... ....+.+.+|+++|+.++|||||++++++.. .+.
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~ 133 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS 133 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence 57999999999999999999975 79999999997533 2335678899999999999999999999754 367
Q ss_pred EEEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeeccccc
Q 005224 446 QMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRL 525 (707)
Q Consensus 446 ~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~ 525 (707)
.|||||||+ |+|.+++... ..+++..++.++.||+.||+|||+++ ||||||||+|||++.++.+||+|||+|+.
T Consensus 134 ~~ivmE~~~-g~L~~~i~~~--~~l~~~~~~~~~~qil~al~ylH~~~---iiHRDlKP~NIl~~~~~~~Ki~DFGla~~ 207 (398)
T 4b99_A 134 VYVVLDLME-SDLHQIIHSS--QPLTLEHVRYFLYQLLRGLKYMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMARG 207 (398)
T ss_dssp EEEEEECCS-EEHHHHHTSS--SCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTCCEEECCCTTCBC
T ss_pred EEEEEeCCC-CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCc---CcCCCcCccccccCCCCCEEEeecceeee
Confidence 899999995 6899999653 46999999999999999999999999 99999999999999999999999999987
Q ss_pred CCCCCCCCccccceecccccCCCccchhhhccC-CCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchh
Q 005224 526 APVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFS 604 (707)
Q Consensus 526 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~sDVwS~Gvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~ 604 (707)
....... ........+||+.|||||++.+. .++.++||||+||++|||++|+.||..... .+.+..+.....
T Consensus 208 ~~~~~~~---~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~-~~~l~~I~~~~g--- 280 (398)
T 4b99_A 208 LCTSPAE---HQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNY-VHQLQLIMMVLG--- 280 (398)
T ss_dssp C----------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSH-HHHHHHHHHHHC---
T ss_pred cccCccc---cccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCH-HHHHHHHHHhcC---
Confidence 6432111 12234457899999999999875 569999999999999999999999975443 222222211100
Q ss_pred hccCCCCCCChHHHHHH-HHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCCC
Q 005224 605 VIDGNMGSYPSECVEKF-IKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLK 683 (707)
Q Consensus 605 ~~~~~~~~~~~~~~~~l-~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~ 683 (707)
..+......+ .......+...|...|.. +...++..++++.|||.+||+.||++|+||+|+|+
T Consensus 281 -------~p~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 344 (398)
T 4b99_A 281 -------TPSPAVIQAVGAERVRAYIQSLPPRQPVP---------WETVYPGADRQALSLLGRMLRFEPSARISAAAALR 344 (398)
T ss_dssp -------CCCGGGTC-----CHHHHHHSSCCCCCCC---------HHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred -------CCChHHhhhhhhhhhhhhhhcCCCcCCCC---------HHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence 0000000000 000111222233333321 11223455667789999999999999999999999
Q ss_pred CCCCCCC
Q 005224 684 HPYVSSD 690 (707)
Q Consensus 684 Hp~f~~~ 690 (707)
||||...
T Consensus 345 Hp~f~~~ 351 (398)
T 4b99_A 345 HPFLAKY 351 (398)
T ss_dssp SGGGTTT
T ss_pred CHhhCcC
Confidence 9999864
No 16
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=2.5e-50 Score=421.95 Aligned_cols=265 Identities=23% Similarity=0.331 Sum_probs=200.5
Q ss_pred CCCccceEeeeCceEEEEEEeCCCcEEEEEEeccCChhhHHHHHHHHHHHHccCCCcceeEEEEEEeCC----eEEEEEe
Q 005224 376 NFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG----EQMLVYE 451 (707)
Q Consensus 376 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~----~~~lV~E 451 (707)
+|...++||+|+||+||+|++ +|+.||||++..... ....+..|+..+.+++|||||+++++|.+++ ..+||||
T Consensus 4 ~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~~-~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~E 81 (303)
T 3hmm_A 4 TIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREE-RSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSD 81 (303)
T ss_dssp GEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEE
T ss_pred EEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccch-hhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEec
Confidence 467789999999999999998 689999999975322 1223345666667889999999999997654 5799999
Q ss_pred cCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhC-----CCCCeEecCCCCCCEEEcCCCcEEEeeecccccC
Q 005224 452 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTE-----ADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 526 (707)
Q Consensus 452 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~-----~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~ 526 (707)
||++|+|.++++.. .++|..+.+++.|+++||+|||++ ..++||||||||+|||+|+++++||+|||+|+..
T Consensus 82 y~~~gsL~~~l~~~---~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~ 158 (303)
T 3hmm_A 82 YHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRH 158 (303)
T ss_dssp CCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEE
T ss_pred CCCCCcHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCccc
Confidence 99999999999764 489999999999999999999987 2345999999999999999999999999999876
Q ss_pred CCCCCCCccccceecccccCCCccchhhhccC------CCCCchhhHHHHHHHHHHHcCCCCCCCCch------------
Q 005224 527 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTH------KLTDKSDVYSLGVVFLELLTGMQPISHGKN------------ 588 (707)
Q Consensus 527 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~------~~s~~sDVwS~Gvll~elltG~~pf~~~~~------------ 588 (707)
...... .........||+.|||||++.+. .++.++|||||||++|||+||+.||.....
T Consensus 159 ~~~~~~---~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~ 235 (303)
T 3hmm_A 159 DSATDT---IDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSD 235 (303)
T ss_dssp ETTTTE---ESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSS
T ss_pred cCCCCc---eeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhccccc
Confidence 432210 01122345799999999999764 367799999999999999999877642111
Q ss_pred -hHHHHHHHhhcccchhhccCCCCC--CChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhc
Q 005224 589 -IVREVNIAYQSSMMFSVIDGNMGS--YPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNM 652 (707)
Q Consensus 589 -~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~ 652 (707)
........... ....+..+. .+.+++..+.+++.+||+.+|++|||+.++++.|+++.+.
T Consensus 236 ~~~~~~~~~~~~----~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~ 298 (303)
T 3hmm_A 236 PSVEEMRKVVCE----QKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 298 (303)
T ss_dssp CCHHHHHHHHTT----SCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred chHHHHHHHHhc----ccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHH
Confidence 11111111110 011111111 1236778899999999999999999999999999988653
No 17
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=3.8e-50 Score=418.69 Aligned_cols=264 Identities=23% Similarity=0.349 Sum_probs=192.7
Q ss_pred cCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCCh-hhHHHHHHHHHHHHccCCCcceeEEEEEEeCC--------
Q 005224 375 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG-------- 444 (707)
Q Consensus 375 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~-------- 444 (707)
++|++.+.||+|+||+||+|+.+ +|+.||||++..... ...+.+.+|+++|++++|||||++++++.+.+
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~ 84 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS 84 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence 45889999999999999999975 799999999875443 33567999999999999999999999986544
Q ss_pred ----eEEEEEecCCCCCHHHHHhhcCC-CCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEee
Q 005224 445 ----EQMLVYEFMSNGTLRDQLSAKSK-EPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVAD 519 (707)
Q Consensus 445 ----~~~lV~E~~~~gsL~~~l~~~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~D 519 (707)
..|+|||||++|+|.+++..... ....+..++.++.||++||+|||+++ |+||||||+|||++.++.+||+|
T Consensus 85 ~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~---IiHRDlKp~NILl~~~~~vKl~D 161 (299)
T 4g31_A 85 SPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGD 161 (299)
T ss_dssp --CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECC
T ss_pred CCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCc---CccccCcHHHeEECCCCcEEEcc
Confidence 36899999999999999976543 23567778999999999999999999 99999999999999999999999
Q ss_pred ecccccCCCCCCCCcc-----ccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHH
Q 005224 520 FGLSRLAPVPDIEGIV-----PAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVN 594 (707)
Q Consensus 520 FGla~~~~~~~~~~~~-----~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~elltG~~pf~~~~~~~~~~~ 594 (707)
||+|+........... ........+||+.|||||++.+..|+.++|||||||++|||++ ||....+......
T Consensus 162 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~~~~~~~ 238 (299)
T 4g31_A 162 FGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQMERVRTLT 238 (299)
T ss_dssp CCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHHHHH
T ss_pred CccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccHHHHHHH
Confidence 9999876543211110 0112344679999999999999999999999999999999996 7753211111000
Q ss_pred HHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCC
Q 005224 595 IAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEET 674 (707)
Q Consensus 595 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~ 674 (707)
. +.. ..+|. ...+. .+...+||.+||+.||++
T Consensus 239 ~---------~~~---~~~p~----------------------~~~~~--------------~~~~~~li~~~L~~dP~~ 270 (299)
T 4g31_A 239 D---------VRN---LKFPP----------------------LFTQK--------------YPCEYVMVQDMLSPSPME 270 (299)
T ss_dssp H---------HHT---TCCCH----------------------HHHHH--------------CHHHHHHHHHHTCSSGGG
T ss_pred H---------Hhc---CCCCC----------------------CCccc--------------CHHHHHHHHHHcCCChhH
Confidence 0 000 00111 11110 111236889999999999
Q ss_pred CCCCCcCCCCCCCCCCCC
Q 005224 675 PPSSSSMLKHPYVSSDVS 692 (707)
Q Consensus 675 R~sa~e~L~Hp~f~~~~~ 692 (707)
|||++|+|+||||..-.+
T Consensus 271 Rps~~eil~h~~~~~~~~ 288 (299)
T 4g31_A 271 RPEAINIIENAVFEDLDF 288 (299)
T ss_dssp SCCHHHHHTSGGGCCC--
T ss_pred CcCHHHHhcCHhhCCCCC
Confidence 999999999999987554
No 18
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=3.7e-48 Score=436.35 Aligned_cols=258 Identities=22% Similarity=0.312 Sum_probs=204.9
Q ss_pred hcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCCh---hhHHHHH---HHHHHHHccCCCcceeEEEEEEeCCeE
Q 005224 374 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFL---TEIQFLSRLHHRNLVSLVGYCDEEGEQ 446 (707)
Q Consensus 374 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~---~~~~~~~---~E~~~l~~l~H~nIv~l~~~~~~~~~~ 446 (707)
.++|++.++||+|+||+||+|+.+ +|+.||||++..... .....+. .++.+++.++|||||+++++|.+.+..
T Consensus 188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~l 267 (689)
T 3v5w_A 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL 267 (689)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEE
Confidence 367999999999999999999975 799999999864321 1122333 346677788999999999999999999
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccC
Q 005224 447 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 526 (707)
Q Consensus 447 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~ 526 (707)
|||||||+||+|.++|...+ .+++..++.++.||+.||+|||+++ ||||||||+|||++.+|++||+|||+|+..
T Consensus 268 ylVmEy~~GGdL~~~l~~~~--~l~E~~a~~y~~qIl~aL~yLH~~g---IiHRDLKPeNILld~~G~vKL~DFGlA~~~ 342 (689)
T 3v5w_A 268 SFILDLMNGGDLHYHLSQHG--VFSEADMRFYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDF 342 (689)
T ss_dssp EEEECCCCSCBHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEEEecCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCchHHeEEeCCCCEEecccceeeec
Confidence 99999999999999997654 4999999999999999999999999 999999999999999999999999999876
Q ss_pred CCCCCCCccccceecccccCCCccchhhhcc-CCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhh
Q 005224 527 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSV 605 (707)
Q Consensus 527 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDVwS~Gvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~ 605 (707)
... .....+||+.|||||++.. ..|+.++||||+||++|||++|+.||........
T Consensus 343 ~~~---------~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~-------------- 399 (689)
T 3v5w_A 343 SKK---------KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK-------------- 399 (689)
T ss_dssp SSC---------CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCH--------------
T ss_pred CCC---------CCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH--------------
Confidence 432 2334689999999999975 6799999999999999999999999964221000
Q ss_pred ccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCC-----CCc
Q 005224 606 IDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPS-----SSS 680 (707)
Q Consensus 606 ~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~s-----a~e 680 (707)
..+.+.+ +...+. -| ...++.+.|||.+||+.||++|++ |+|
T Consensus 400 -------------~~i~~~i---~~~~~~-~p----------------~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~e 446 (689)
T 3v5w_A 400 -------------HEIDRMT---LTMAVE-LP----------------DSFSPELRSLLEGLLQRDVNRRLGCLGRGAQE 446 (689)
T ss_dssp -------------HHHHHHH---HHCCCC-CC----------------TTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHH
T ss_pred -------------HHHHHhh---cCCCCC-CC----------------ccCCHHHHHHHHHHccCCHhHCCCCCCCCHHH
Confidence 0011111 111110 01 112334457888999999999998 589
Q ss_pred CCCCCCCCCCCC
Q 005224 681 MLKHPYVSSDVS 692 (707)
Q Consensus 681 ~L~Hp~f~~~~~ 692 (707)
+++||||.+-.+
T Consensus 447 i~~HpfF~~idW 458 (689)
T 3v5w_A 447 VKESPFFRSLDW 458 (689)
T ss_dssp HTTSGGGTTCCH
T ss_pred HhcCccccCCCH
Confidence 999999988665
No 19
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=9.9e-48 Score=435.72 Aligned_cols=260 Identities=22% Similarity=0.367 Sum_probs=216.3
Q ss_pred hcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEec
Q 005224 374 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 452 (707)
Q Consensus 374 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E~ 452 (707)
.++|++.+.||+|+||+||+|..+ +|+.||+|++........+.+.+|+++|+.++|||||+++++|.+.+..+|||||
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~ 235 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEF 235 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEee
Confidence 368999999999999999999975 7999999999876666677899999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCC--CcEEEeeecccccCCCCC
Q 005224 453 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHK--FTAKVADFGLSRLAPVPD 530 (707)
Q Consensus 453 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~--~~~kl~DFGla~~~~~~~ 530 (707)
|++|+|.+++... ...+++..+..++.||+.||+|||+++ |+||||||+|||++.+ +.+||+|||+|+.....
T Consensus 236 ~~gg~L~~~i~~~-~~~l~e~~~~~~~~qi~~al~ylH~~~---iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~- 310 (573)
T 3uto_A 236 MSGGELFEKVADE-HNKMSEDEAVEYMRQVCKGLCHMHENN---YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPK- 310 (573)
T ss_dssp CCCCBHHHHHTCT-TSCEEHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSSSCCCEEECCCSSCEECCTT-
T ss_pred cCCCcHHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCChhhccccCCCCCCEEEeeccceeEccCC-
Confidence 9999999999643 345999999999999999999999999 9999999999999854 89999999999876532
Q ss_pred CCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCCC
Q 005224 531 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 610 (707)
Q Consensus 531 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 610 (707)
......+||+.|||||++.+..|+.++||||+||++|||++|+.||...... +..
T Consensus 311 -------~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~-~~~----------------- 365 (573)
T 3uto_A 311 -------QSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDD-ETL----------------- 365 (573)
T ss_dssp -------SEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHH-HHH-----------------
T ss_pred -------CceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH-HHH-----------------
Confidence 2334568999999999999999999999999999999999999999754331 111
Q ss_pred CCCChHHHHHHHHHHHHh-cccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCCCCCCCCC
Q 005224 611 GSYPSECVEKFIKLALKC-CQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSS 689 (707)
Q Consensus 611 ~~~~~~~~~~l~~l~~~c-~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f~~ 689 (707)
+.+..+ +...+ ...+..++.+.|||.+||+.||++|+|++|+|+||||..
T Consensus 366 ------------~~i~~~~~~~~~-----------------~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~Hpw~~~ 416 (573)
T 3uto_A 366 ------------RNVKSCDWNMDD-----------------SAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTP 416 (573)
T ss_dssp ------------HHHHTTCCCCCS-----------------GGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTTTSC
T ss_pred ------------HHHHhCCCCCCc-----------------ccccCCCHHHHHHHHHHccCChhHCcCHHHHhcCcCcCC
Confidence 111111 11000 011222344568999999999999999999999999987
Q ss_pred CCC
Q 005224 690 DVS 692 (707)
Q Consensus 690 ~~~ 692 (707)
...
T Consensus 417 ~~~ 419 (573)
T 3uto_A 417 GNA 419 (573)
T ss_dssp CCC
T ss_pred CCC
Confidence 554
No 20
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=1.3e-44 Score=383.64 Aligned_cols=257 Identities=24% Similarity=0.337 Sum_probs=210.3
Q ss_pred hcCCCccceEeeeCceEEEEEEe-CCCcEEEEEEeccC--ChhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEE
Q 005224 374 TNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEG--SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 450 (707)
Q Consensus 374 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~ 450 (707)
.++|++.+.||+|+||.||+|.. .+|+.||||++... .....+.+.+|+++++.++||||+++++++...+..++||
T Consensus 14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 93 (328)
T 3fe3_A 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIM 93 (328)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence 46899999999999999999997 58999999998653 2334567889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCC
Q 005224 451 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 530 (707)
Q Consensus 451 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~ 530 (707)
||+++|+|.+++.... .+++..++.++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 94 e~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~al~~lH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~- 167 (328)
T 3fe3_A 94 EYASGGEVFDYLVAHG--RMKEKEARSKFRQIVSAVQYCHQKR---IVHRDLKAENLLLDADMNIKIADFGFSNEFTVG- 167 (328)
T ss_dssp CCCTTCBHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECSTTCCGGGSSS-
T ss_pred ECCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---EeccCCCHHHEEEcCCCCEEEeeccCceecCCC-
Confidence 9999999999997653 4899999999999999999999999 999999999999999999999999999765432
Q ss_pred CCCccccceecccccCCCccchhhhccCCCC-CchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCC
Q 005224 531 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKLT-DKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGN 609 (707)
Q Consensus 531 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s-~~sDVwS~Gvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 609 (707)
.......||+.|+|||++.+..+. .++||||+||++|||++|+.||...... .
T Consensus 168 -------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-~------------------ 221 (328)
T 3fe3_A 168 -------GKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLK-E------------------ 221 (328)
T ss_dssp -------CGGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHH-H------------------
T ss_pred -------CccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHH-H------------------
Confidence 123456799999999999988875 7899999999999999999999653321 1
Q ss_pred CCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCCCCCCCCC
Q 005224 610 MGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSS 689 (707)
Q Consensus 610 ~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f~~ 689 (707)
+.+.+.......|. ..++...+|+.+||..||++|||++|+|+||||..
T Consensus 222 -----------~~~~i~~~~~~~p~--------------------~~s~~~~~li~~~L~~dP~~R~t~~eil~h~~~~~ 270 (328)
T 3fe3_A 222 -----------LRERVLRGKYRIPF--------------------YMSTDCENLLKRFLVLNPIKRGTLEQIMKDRWINA 270 (328)
T ss_dssp -----------HHHHHHHCCCCCCT--------------------TSCHHHHHHHHHHCCSSTTTSCCHHHHTTCTTTTT
T ss_pred -----------HHHHHHhCCCCCCC--------------------CCCHHHHHHHHHHCCCChhHCcCHHHHhcCHhhcC
Confidence 11111111000110 11223347888999999999999999999999987
Q ss_pred CCCC
Q 005224 690 DVSG 693 (707)
Q Consensus 690 ~~~~ 693 (707)
....
T Consensus 271 ~~~~ 274 (328)
T 3fe3_A 271 GHEE 274 (328)
T ss_dssp TCTT
T ss_pred CCcc
Confidence 6543
No 21
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=2.3e-44 Score=381.68 Aligned_cols=284 Identities=43% Similarity=0.754 Sum_probs=234.3
Q ss_pred ccCcccccHHHHHHHhcCCCccceEeeeCceEEEEEEeCCCcEEEEEEeccCChh-hHHHHHHHHHHHHccCCCcceeEE
Q 005224 359 IDGVRSFTYGEMALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQ-GEKEFLTEIQFLSRLHHRNLVSLV 437 (707)
Q Consensus 359 ~~~~~~~~~~~l~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~-~~~~~~~E~~~l~~l~H~nIv~l~ 437 (707)
......+++.++....++|+..+.||+|+||+||+|..++++.||||++...... ....+.+|+++++.++||||++++
T Consensus 14 ~~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~ 93 (326)
T 3uim_A 14 LGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLR 93 (326)
T ss_dssp -CCCEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCC
T ss_pred cCccceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceE
Confidence 3445678999999999999999999999999999999888999999998764322 234689999999999999999999
Q ss_pred EEEEeCCeEEEEEecCCCCCHHHHHhhcC--CCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcE
Q 005224 438 GYCDEEGEQMLVYEFMSNGTLRDQLSAKS--KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTA 515 (707)
Q Consensus 438 ~~~~~~~~~~lV~E~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ 515 (707)
+++...+..++||||+++|+|.+++.... ...+++..++.++.|++.||+|||+.+.++|+||||||+|||+++++.+
T Consensus 94 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~ 173 (326)
T 3uim_A 94 GFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEA 173 (326)
T ss_dssp EEECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCE
T ss_pred EEEecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCE
Confidence 99999999999999999999999997643 3459999999999999999999999922239999999999999999999
Q ss_pred EEeeecccccCCCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCC-------Cch
Q 005224 516 KVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISH-------GKN 588 (707)
Q Consensus 516 kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~elltG~~pf~~-------~~~ 588 (707)
||+|||+++...... ........||+.|+|||++.+..++.++|||||||++|||++|+.||.. ...
T Consensus 174 kl~Dfg~~~~~~~~~------~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~ 247 (326)
T 3uim_A 174 VVGDFGLAKLMDYKD------THVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVM 247 (326)
T ss_dssp EECCCSSCEECCSSS------SCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSB
T ss_pred EeccCccccccCccc------ccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchh
Confidence 999999998764322 2233445699999999999999999999999999999999999999952 112
Q ss_pred hHHHHHHHhhcccchhhccCCC-CCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 005224 589 IVREVNIAYQSSMMFSVIDGNM-GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELES 648 (707)
Q Consensus 589 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~ 648 (707)
..+++.............+... ..++.+++..+.+++..||+.+|.+||++.++++.|+.
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~ 308 (326)
T 3uim_A 248 LLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG 308 (326)
T ss_dssp HHHHHTTTTSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHT
T ss_pred HHHHHHHHhhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcC
Confidence 2333333223333333333333 34678889999999999999999999999999999985
No 22
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=4.3e-44 Score=374.65 Aligned_cols=259 Identities=22% Similarity=0.358 Sum_probs=212.1
Q ss_pred hcCCCccceEeeeCceEEEEEEe-CCCcEEEEEEeccCChhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEec
Q 005224 374 TNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 452 (707)
Q Consensus 374 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E~ 452 (707)
.++|+..+.||+|+||+||+|.. .+++.||||++........+.+.+|+.+++.++||||+++++++...+..++||||
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 98 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 98 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEEC
Confidence 46899999999999999999996 47999999998765555667899999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCC
Q 005224 453 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 532 (707)
Q Consensus 453 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 532 (707)
+++|+|.+++... .+++..++.++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||++.......
T Consensus 99 ~~~~~L~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-- 170 (297)
T 3fxz_A 99 LAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ-- 170 (297)
T ss_dssp CTTCBHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEECCSTT--
T ss_pred CCCCCHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhCC---ceeCCCCHHHEEECCCCCEEEeeCCCceecCCcc--
Confidence 9999999999764 4899999999999999999999999 9999999999999999999999999998664322
Q ss_pred CccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCCCCC
Q 005224 533 GIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGS 612 (707)
Q Consensus 533 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 612 (707)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||...........
T Consensus 171 -----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~------------------ 227 (297)
T 3fxz_A 171 -----SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYL------------------ 227 (297)
T ss_dssp -----CCBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHH------------------
T ss_pred -----cccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH------------------
Confidence 123345789999999999999999999999999999999999999965443211111
Q ss_pred CChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCCCCCCCCCCCC
Q 005224 613 YPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSSDVS 692 (707)
Q Consensus 613 ~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f~~~~~ 692 (707)
+.... .+... .. ...+....+|+.+||..||++|||++|+|+||||.....
T Consensus 228 -----------~~~~~---~~~~~-~~--------------~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~~~ 278 (297)
T 3fxz_A 228 -----------IATNG---TPELQ-NP--------------EKLSAIFRDFLNRCLEMDVEKRGSAKELLQHQFLKIAKP 278 (297)
T ss_dssp -----------HHHHC---SCCCS-CG--------------GGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGCCC
T ss_pred -----------HHhCC---CCCCC-Cc--------------cccCHHHHHHHHHHccCChhHCcCHHHHhhChhhcccCc
Confidence 00000 00000 00 011122346888899999999999999999999986654
No 23
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=5.9e-44 Score=377.86 Aligned_cols=279 Identities=43% Similarity=0.719 Sum_probs=232.7
Q ss_pred cHHHHHHHhcCCCccceEeeeCceEEEEEEeCCCcEEEEEEeccCChhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCe
Q 005224 366 TYGEMALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGE 445 (707)
Q Consensus 366 ~~~~l~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~ 445 (707)
.+.++...+++|+..+.||+|+||+||+|.+++++.||||++........+.+.+|+++++.++||||+++++++...+.
T Consensus 30 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 109 (321)
T 2qkw_B 30 PLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNE 109 (321)
T ss_dssp CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTC
T ss_pred cHHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCe
Confidence 34455567889999999999999999999988899999999887666666789999999999999999999999999999
Q ss_pred EEEEEecCCCCCHHHHHhhcC--CCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeeccc
Q 005224 446 QMLVYEFMSNGTLRDQLSAKS--KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLS 523 (707)
Q Consensus 446 ~~lV~E~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla 523 (707)
.++||||+++|+|.+++.... ...+++..++.++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||++
T Consensus 110 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~ 186 (321)
T 2qkw_B 110 MILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGIS 186 (321)
T ss_dssp CEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCSTTEEECTTCCEEECCCTTC
T ss_pred EEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCC---eecCCCCHHHEEECCCCCEEEeecccc
Confidence 999999999999999996543 235899999999999999999999998 999999999999999999999999999
Q ss_pred ccCCCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCc-----hhHHHHHHHhh
Q 005224 524 RLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK-----NIVREVNIAYQ 598 (707)
Q Consensus 524 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~elltG~~pf~~~~-----~~~~~~~~~~~ 598 (707)
+....... ........||+.|+|||++.+..++.++|||||||++|||++|+.||.... ....+......
T Consensus 187 ~~~~~~~~-----~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~ 261 (321)
T 2qkw_B 187 KKGTELDQ-----THLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHN 261 (321)
T ss_dssp EECSSSSC-----CCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHT
T ss_pred cccccccc-----cccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccc
Confidence 86542221 122234568999999999999999999999999999999999999996432 22333322233
Q ss_pred cccchhhccCCC-CCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhc
Q 005224 599 SSMMFSVIDGNM-GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNM 652 (707)
Q Consensus 599 ~~~~~~~~~~~~-~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~ 652 (707)
.......+++.. ...+.+++..+.+++.+||+.+|++||++.++++.|+.+...
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~ 316 (321)
T 2qkw_B 262 NGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRL 316 (321)
T ss_dssp TTCCCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred cccHHHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhhc
Confidence 333333444333 236788999999999999999999999999999999988754
No 24
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=1.5e-44 Score=396.75 Aligned_cols=272 Identities=24% Similarity=0.277 Sum_probs=217.2
Q ss_pred ccHHHHHHHhcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCChhh---HHHHHHHHHHHHccCCCcceeEEEEE
Q 005224 365 FTYGEMALATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQG---EKEFLTEIQFLSRLHHRNLVSLVGYC 440 (707)
Q Consensus 365 ~~~~~l~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~---~~~~~~E~~~l~~l~H~nIv~l~~~~ 440 (707)
+.+.++....++|++.++||+|+||+||+|+.+ +++.||||++....... ...+.+|+.+++.++||||++++++|
T Consensus 64 ~~~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~ 143 (437)
T 4aw2_A 64 SKVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAF 143 (437)
T ss_dssp HHHHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEE
T ss_pred chhhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEE
Confidence 345667777899999999999999999999976 58999999986532211 23488999999999999999999999
Q ss_pred EeCCeEEEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeee
Q 005224 441 DEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADF 520 (707)
Q Consensus 441 ~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DF 520 (707)
.+.+..++|||||++|+|.+++... ...+++..++.++.||+.||+|||+.+ |+||||||+|||++.++.+||+||
T Consensus 144 ~~~~~~~lV~Ey~~gg~L~~~l~~~-~~~l~e~~~~~~~~qi~~aL~~LH~~g---iiHrDLKp~NILl~~~g~vkL~DF 219 (437)
T 4aw2_A 144 QDDNNLYLVMDYYVGGDLLTLLSKF-EDRLPEEMARFYLAEMVIAIDSVHQLH---YVHRDIKPDNILMDMNGHIRLADF 219 (437)
T ss_dssp ECSSEEEEEECCCTTCBHHHHHHTT-TTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCC
T ss_pred eeCCEEEEEEecCCCCcHHHHHHHc-cCCCCHHHHHHHHHHHHHHHHHHHhCC---eEecccCHHHeeEcCCCCEEEcch
Confidence 9999999999999999999999763 345999999999999999999999999 999999999999999999999999
Q ss_pred cccccCCCCCCCCccccceecccccCCCccchhhhc-----cCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHH
Q 005224 521 GLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFL-----THKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNI 595 (707)
Q Consensus 521 Gla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~s~~sDVwS~Gvll~elltG~~pf~~~~~~~~~~~~ 595 (707)
|+|+...... ........||+.|+|||++. ...++.++|||||||++|||++|+.||...... +...
T Consensus 220 Gla~~~~~~~------~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~-~~~~- 291 (437)
T 4aw2_A 220 GSCLKLMEDG------TVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLV-ETYG- 291 (437)
T ss_dssp TTCEECCTTS------CEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHH-HHHH-
T ss_pred hhhhhcccCC------CcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChh-HHHH-
Confidence 9997654322 22234467999999999997 467899999999999999999999999754321 1110
Q ss_pred HhhcccchhhccCCCCCCChHHHHHHHHHHHHhcc-cCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCC
Q 005224 596 AYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQ-DETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEET 674 (707)
Q Consensus 596 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~-~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~ 674 (707)
+++..... .-|.. ....++.+.|||.+||..+|++
T Consensus 292 ---------------------------~i~~~~~~~~~p~~-----------------~~~~s~~~~dLi~~lL~~~~~r 327 (437)
T 4aw2_A 292 ---------------------------KIMNHKERFQFPTQ-----------------VTDVSENAKDLIRRLICSREHR 327 (437)
T ss_dssp ---------------------------HHHTHHHHCCCCSS-----------------CCCSCHHHHHHHHTTSSCGGGC
T ss_pred ---------------------------hhhhccccccCCcc-----------------cccCCHHHHHHHHHHhcccccc
Confidence 11100000 00100 1123344567899999998888
Q ss_pred --CCCCCcCCCCCCCCCCCC
Q 005224 675 --PPSSSSMLKHPYVSSDVS 692 (707)
Q Consensus 675 --R~sa~e~L~Hp~f~~~~~ 692 (707)
|++++|+++||||.+..+
T Consensus 328 ~~r~~~~eil~Hpff~~i~w 347 (437)
T 4aw2_A 328 LGQNGIEDFKKHPFFSGIDW 347 (437)
T ss_dssp TTTTTTHHHHTSGGGTTCCT
T ss_pred cCCCCHHHHhCCCccCCCCH
Confidence 999999999999988766
No 25
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=8.5e-45 Score=388.88 Aligned_cols=204 Identities=26% Similarity=0.409 Sum_probs=174.0
Q ss_pred HHhcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCC---hhhHHHHHHHHHHHHcc-CCCcceeEEEEEEeCCeE
Q 005224 372 LATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQ 446 (707)
Q Consensus 372 ~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~ 446 (707)
...++|++.+.||+|+||+||+|+.+ +++.||||++.... ....+.+.+|.++++.+ +||||+++++++.+.+..
T Consensus 20 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~ 99 (353)
T 3txo_A 20 LGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRL 99 (353)
T ss_dssp ---CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEE
T ss_pred CchhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEE
Confidence 34578999999999999999999975 68999999997532 22345678899999988 799999999999999999
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccC
Q 005224 447 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 526 (707)
Q Consensus 447 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~ 526 (707)
++||||+++|+|.+++.... .+++..++.++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 100 ~lv~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NILl~~~g~ikL~DFG~a~~~ 174 (353)
T 3txo_A 100 FFVMEFVNGGDLMFHIQKSR--RFDEARARFYAAEIISALMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCKEG 174 (353)
T ss_dssp EEEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCS
T ss_pred EEEEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---CcccCCCHHHEEECCCCCEEEccccceeec
Confidence 99999999999999997653 4899999999999999999999999 999999999999999999999999999854
Q ss_pred CCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCc
Q 005224 527 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 587 (707)
Q Consensus 527 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~elltG~~pf~~~~ 587 (707)
... .......+||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 175 ~~~-------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~ 228 (353)
T 3txo_A 175 ICN-------GVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAEN 228 (353)
T ss_dssp CC----------------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred ccC-------CccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCC
Confidence 321 123345679999999999999999999999999999999999999997543
No 26
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=2.1e-44 Score=379.68 Aligned_cols=277 Identities=25% Similarity=0.350 Sum_probs=210.0
Q ss_pred hcCCCccceEeeeCceEEEEEEeCCCcEEEEEEeccCChh--hHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEe
Q 005224 374 TNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQ--GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 451 (707)
Q Consensus 374 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~--~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E 451 (707)
.++|++.+.||+|+||+||+|...+|+.||+|++...... ..+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 20 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 99 (311)
T 3niz_A 20 MEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFE 99 (311)
T ss_dssp SCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEE
T ss_pred HhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEc
Confidence 4689999999999999999999988999999998753322 24678899999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCC
Q 005224 452 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 531 (707)
Q Consensus 452 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 531 (707)
|++ |+|.+++... ...+++..++.++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 100 ~~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~- 173 (311)
T 3niz_A 100 FME-KDLKKVLDEN-KTGLQDSQIKIYLYQLLRGVAHCHQHR---ILHRDLKPQNLLINSDGALKLADFGLARAFGIPV- 173 (311)
T ss_dssp CCS-EEHHHHHHTC-TTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEETTSCC-
T ss_pred CCC-CCHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCchHhEEECCCCCEEEccCcCceecCCCc-
Confidence 997 5888888654 345899999999999999999999999 9999999999999999999999999998754321
Q ss_pred CCccccceecccccCCCccchhhhcc-CCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCCC
Q 005224 532 EGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 610 (707)
Q Consensus 532 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDVwS~Gvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 610 (707)
.......||+.|+|||++.+ ..++.++|||||||++|||++|+.||..........
T Consensus 174 ------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~----------------- 230 (311)
T 3niz_A 174 ------RSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLP----------------- 230 (311)
T ss_dssp ------C---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHH-----------------
T ss_pred ------ccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHH-----------------
Confidence 22334568999999999987 568999999999999999999999997543311110
Q ss_pred CCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH---------HhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcC
Q 005224 611 GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELE---------SIWNMMPESDTKTPEFINSEHTSKEETPPSSSSM 681 (707)
Q Consensus 611 ~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~---------~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~ 681 (707)
.+...+-...|...+...++....+ ......+...+...+||.+||..||++|||++|+
T Consensus 231 ------------~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~el 298 (311)
T 3niz_A 231 ------------KIFSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDA 298 (311)
T ss_dssp ------------HHHHHHCCCCTTTSGGGTTSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHH
T ss_pred ------------HHHHHHCCCChHHhhhhhccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHH
Confidence 0111111111111111110000000 0001122334455689999999999999999999
Q ss_pred CCCCCCCCCC
Q 005224 682 LKHPYVSSDV 691 (707)
Q Consensus 682 L~Hp~f~~~~ 691 (707)
|+||||..-.
T Consensus 299 l~hp~f~~~~ 308 (311)
T 3niz_A 299 MNHPYFKDLD 308 (311)
T ss_dssp HTSGGGTTSC
T ss_pred hcCcccccCC
Confidence 9999998653
No 27
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=1.4e-44 Score=393.99 Aligned_cols=209 Identities=22% Similarity=0.310 Sum_probs=181.2
Q ss_pred HHHHHHHhcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCCh---hhHHHHHHHHHHHHccCCCcceeEEEEEEe
Q 005224 367 YGEMALATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDE 442 (707)
Q Consensus 367 ~~~l~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~ 442 (707)
..++....++|++.++||+|+||+||+|+.+ +++.||+|++..... ...+.+.+|+.+++.++||||++++++|.+
T Consensus 61 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~ 140 (410)
T 3v8s_A 61 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD 140 (410)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred HHhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEE
Confidence 4456667789999999999999999999976 689999999865221 112357899999999999999999999999
Q ss_pred CCeEEEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecc
Q 005224 443 EGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGL 522 (707)
Q Consensus 443 ~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGl 522 (707)
.+..++||||+++|+|.+++... .+++..++.++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+
T Consensus 141 ~~~~~lV~E~~~gg~L~~~l~~~---~~~e~~~~~~~~qi~~aL~~LH~~g---ivHrDLKp~NILl~~~g~ikL~DFG~ 214 (410)
T 3v8s_A 141 DRYLYMVMEYMPGGDLVNLMSNY---DVPEKWARFYTAEVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGT 214 (410)
T ss_dssp SSEEEEEECCCTTEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTT
T ss_pred CCEEEEEEeCCCCCcHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeeECCCCCEEEeccce
Confidence 99999999999999999999653 4899999999999999999999999 99999999999999999999999999
Q ss_pred cccCCCCCCCCccccceecccccCCCccchhhhccCC----CCCchhhHHHHHHHHHHHcCCCCCCCCc
Q 005224 523 SRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHK----LTDKSDVYSLGVVFLELLTGMQPISHGK 587 (707)
Q Consensus 523 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~s~~sDVwS~Gvll~elltG~~pf~~~~ 587 (707)
++...... ........||+.|+|||++.+.. ++.++|||||||++|||++|+.||....
T Consensus 215 a~~~~~~~------~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~ 277 (410)
T 3v8s_A 215 CMKMNKEG------MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADS 277 (410)
T ss_dssp CEECCTTS------EEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSS
T ss_pred eEeeccCC------cccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCC
Confidence 98764322 12234567999999999998765 7899999999999999999999997543
No 28
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=1.9e-44 Score=391.02 Aligned_cols=200 Identities=25% Similarity=0.390 Sum_probs=176.3
Q ss_pred hcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCChh---hHHHHHHHHHHHHcc-CCCcceeEEEEEEeCCeEEE
Q 005224 374 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ---GEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQML 448 (707)
Q Consensus 374 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~---~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~l 448 (707)
.++|++.++||+|+||+||+|+.+ +++.||+|+++..... ..+.+.+|..+++++ +||||+++++++.+.+..++
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 130 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 130 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence 467899999999999999999975 6889999999754322 224578899999887 89999999999999999999
Q ss_pred EEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCC
Q 005224 449 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 528 (707)
Q Consensus 449 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~ 528 (707)
||||+++|+|.+++.... .+++..++.++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 131 V~E~~~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~LH~~g---ivHrDLKp~NILl~~~g~ikL~DFGla~~~~~ 205 (396)
T 4dc2_A 131 VIEYVNGGDLMFHMQRQR--KLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR 205 (396)
T ss_dssp EEECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred EEEcCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---EEeccCCHHHEEECCCCCEEEeecceeeeccc
Confidence 999999999999997643 5999999999999999999999999 99999999999999999999999999985322
Q ss_pred CCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCC
Q 005224 529 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISH 585 (707)
Q Consensus 529 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~elltG~~pf~~ 585 (707)
. .......+||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 206 ~-------~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~ 255 (396)
T 4dc2_A 206 P-------GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI 255 (396)
T ss_dssp T-------TCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTT
T ss_pred C-------CCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcc
Confidence 1 2234456799999999999999999999999999999999999999963
No 29
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=1e-43 Score=381.49 Aligned_cols=259 Identities=24% Similarity=0.336 Sum_probs=210.8
Q ss_pred hcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCChh------hHHHHHHHHHHHHccCCCcceeEEEEEEeCCeE
Q 005224 374 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ------GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQ 446 (707)
Q Consensus 374 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~------~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~ 446 (707)
.++|++.+.||+|+||+||+|... +|+.||+|++...... ..+.+.+|+.+++.++||||+++++++.+.+..
T Consensus 11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 90 (361)
T 2yab_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDV 90 (361)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEE
Confidence 467999999999999999999975 6999999998764322 246789999999999999999999999999999
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCC----cEEEeeecc
Q 005224 447 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKF----TAKVADFGL 522 (707)
Q Consensus 447 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~----~~kl~DFGl 522 (707)
++||||+++|+|.+++... ..+++..++.++.||+.||.|||+.+ |+||||||+|||+++++ .+||+|||+
T Consensus 91 ~lv~e~~~gg~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~~~~vkl~DFG~ 165 (361)
T 2yab_A 91 VLILELVSGGELFDFLAQK--ESLSEEEATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGL 165 (361)
T ss_dssp EEEEECCCSCBHHHHHTTC--SCCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESCTTSSSCCEEECCCSS
T ss_pred EEEEEcCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEeCCCCCccCEEEEecCC
Confidence 9999999999999999653 46999999999999999999999999 99999999999998877 799999999
Q ss_pred cccCCCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccc
Q 005224 523 SRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMM 602 (707)
Q Consensus 523 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~elltG~~pf~~~~~~~~~~~~~~~~~~~ 602 (707)
++...... ......||+.|+|||++.+..++.++|||||||++|||++|..||...... +.....
T Consensus 166 a~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~-~~~~~i------ 230 (361)
T 2yab_A 166 AHEIEDGV--------EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ-ETLANI------ 230 (361)
T ss_dssp CEECCTTC--------CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH-HHHHHH------
T ss_pred ceEcCCCC--------ccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHH------
Confidence 98764321 223456999999999999999999999999999999999999999754321 111000
Q ss_pred hhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCC
Q 005224 603 FSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSML 682 (707)
Q Consensus 603 ~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L 682 (707)
... ...++... .+..+..+.+||.+||..||++|||++|+|
T Consensus 231 ---~~~-~~~~~~~~-----------------------------------~~~~s~~~~~li~~~L~~dP~~R~t~~e~l 271 (361)
T 2yab_A 231 ---TAV-SYDFDEEF-----------------------------------FSQTSELAKDFIRKLLVKETRKRLTIQEAL 271 (361)
T ss_dssp ---HTT-CCCCCHHH-----------------------------------HTTSCHHHHHHHHHHSCSSTTTSCCHHHHH
T ss_pred ---Hhc-CCCCCchh-----------------------------------ccCCCHHHHHHHHHHCCCChhHCcCHHHHh
Confidence 000 00111110 012233445799999999999999999999
Q ss_pred CCCCCCCCC
Q 005224 683 KHPYVSSDV 691 (707)
Q Consensus 683 ~Hp~f~~~~ 691 (707)
+||||....
T Consensus 272 ~hp~~~~~~ 280 (361)
T 2yab_A 272 RHPWITPVD 280 (361)
T ss_dssp TSTTTSCSS
T ss_pred cCcCcCCCc
Confidence 999998543
No 30
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=4.1e-44 Score=381.13 Aligned_cols=202 Identities=26% Similarity=0.343 Sum_probs=178.4
Q ss_pred hcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCC---hhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEE
Q 005224 374 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 449 (707)
Q Consensus 374 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV 449 (707)
.++|+..+.||+|+||+||+|..+ +|+.||+|++.... ......+.+|+++++.++||||+++++++...+..++|
T Consensus 4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv 83 (337)
T 1o6l_A 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV 83 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEE
Confidence 367889999999999999999975 79999999997532 22346788999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCC
Q 005224 450 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 529 (707)
Q Consensus 450 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~ 529 (707)
|||+++|+|.+++.... .+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 84 ~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~ 158 (337)
T 1o6l_A 84 MEYANGGELFFHLSRER--VFTEERARFYGAEIVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISD 158 (337)
T ss_dssp EECCTTCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCSCCT
T ss_pred EeCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eecCcCCHHHEEECCCCCEEEeeccchhhcccC
Confidence 99999999999997643 5899999999999999999999999 999999999999999999999999999854321
Q ss_pred CCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCc
Q 005224 530 DIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 587 (707)
Q Consensus 530 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~elltG~~pf~~~~ 587 (707)
........||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 159 -------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~ 209 (337)
T 1o6l_A 159 -------GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD 209 (337)
T ss_dssp -------TCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred -------CCcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCC
Confidence 122345679999999999999999999999999999999999999997543
No 31
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=3.3e-44 Score=383.05 Aligned_cols=259 Identities=21% Similarity=0.327 Sum_probs=199.9
Q ss_pred HhcCCCccceEeeeCceEEEEEEe-CCCcEEEEEEeccCChh-hHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEE
Q 005224 373 ATNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQ-GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 450 (707)
Q Consensus 373 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~-~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~ 450 (707)
..++|++.+.||+|+||+||+|.. .+|+.||||++...... ..+.+.+|+++++.++||||+++++++...+..++||
T Consensus 8 l~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 87 (347)
T 3zgw_A 8 LLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVL 87 (347)
T ss_dssp TTTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HhcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEE
Confidence 357899999999999999999996 47999999998764432 2357889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCC
Q 005224 451 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 530 (707)
Q Consensus 451 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~ 530 (707)
||+++|+|.+++.... .+++..++.++.||+.||+|||+.+ |+||||||+|||+++++.+||+|||++.......
T Consensus 88 E~~~gg~L~~~l~~~~--~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~ 162 (347)
T 3zgw_A 88 EYCPGGELFDYIISQD--RLSEEETRVVFRQIVSAVAYVHSQG---YAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNK 162 (347)
T ss_dssp ECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBC-----
T ss_pred eCCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCccHHHEEEcCCCCEEEEeccCcccccCCC
Confidence 9999999999997643 4899999999999999999999999 9999999999999999999999999987653221
Q ss_pred CCCccccceecccccCCCccchhhhccCCC-CCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCC
Q 005224 531 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKL-TDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGN 609 (707)
Q Consensus 531 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-s~~sDVwS~Gvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 609 (707)
........||+.|+|||++.+..+ +.++||||+||++|||++|+.||...... .....
T Consensus 163 ------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~-~~~~~-------------- 221 (347)
T 3zgw_A 163 ------DYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVM-ALYKK-------------- 221 (347)
T ss_dssp ---------------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHH--------------
T ss_pred ------CccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHH-HHHHH--------------
Confidence 122344579999999999998775 88999999999999999999999754321 11110
Q ss_pred CCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCCCCCCCCC
Q 005224 610 MGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSS 689 (707)
Q Consensus 610 ~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f~~ 689 (707)
+.. .-...| ...++...+||.+||+.||++|||++|+|+||||..
T Consensus 222 --------------i~~-~~~~~p--------------------~~~s~~~~~li~~~L~~dP~~Rps~~eil~hp~~~~ 266 (347)
T 3zgw_A 222 --------------IMR-GKYDVP--------------------KWLSPSSILLLQQMLQVDPKKRISMKNLLNHPWIMQ 266 (347)
T ss_dssp --------------HHH-TCCCCC--------------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHTCHHHHT
T ss_pred --------------HHc-CCCCCC--------------------CCCCHHHHHHHHHHcccCHhHCcCHHHHhcCcchhc
Confidence 000 000000 001222345788888888888888888889998876
Q ss_pred CCC
Q 005224 690 DVS 692 (707)
Q Consensus 690 ~~~ 692 (707)
+..
T Consensus 267 ~~~ 269 (347)
T 3zgw_A 267 DYN 269 (347)
T ss_dssp TTC
T ss_pred CCC
Confidence 543
No 32
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=1.9e-43 Score=373.99 Aligned_cols=270 Identities=21% Similarity=0.314 Sum_probs=216.3
Q ss_pred ccccHHHHHHHhcC----------CCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHccCCC
Q 005224 363 RSFTYGEMALATNN----------FNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHR 431 (707)
Q Consensus 363 ~~~~~~~l~~~~~~----------~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~ 431 (707)
..++++++..+++. |+..+.||+|+||.||+|... +|+.||||++........+.+.+|+.+++.++||
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ 102 (321)
T 2c30_A 23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHF 102 (321)
T ss_dssp --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCT
T ss_pred CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCC
Confidence 35777777777654 677789999999999999976 7999999999876656667899999999999999
Q ss_pred cceeEEEEEEeCCeEEEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcC
Q 005224 432 NLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDH 511 (707)
Q Consensus 432 nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~ 511 (707)
||+++++++...+..++||||+++++|.+++.. ..+++..+..++.|+++||+|||+.+ |+||||||+|||++.
T Consensus 103 niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~---~~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~ 176 (321)
T 2c30_A 103 NVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQ---VRLNEEQIATVCEAVLQALAYLHAQG---VIHRDIKSDSILLTL 176 (321)
T ss_dssp TBCCEEEEEEETTEEEEEECCCCSCBHHHHHTT---CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECT
T ss_pred CcceEEEEEEECCEEEEEEecCCCCCHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECC
Confidence 999999999999999999999999999999854 35899999999999999999999998 999999999999999
Q ss_pred CCcEEEeeecccccCCCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHH
Q 005224 512 KFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVR 591 (707)
Q Consensus 512 ~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~elltG~~pf~~~~~~~~ 591 (707)
++.+||+|||++....... .......||+.|+|||++.+..++.++|||||||++|||++|+.||........
T Consensus 177 ~~~~kl~Dfg~~~~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~ 249 (321)
T 2c30_A 177 DGRVKLSDFGFCAQISKDV-------PKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQA 249 (321)
T ss_dssp TCCEEECCCTTCEECCSSS-------CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH
T ss_pred CCcEEEeeeeeeeecccCc-------cccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 9999999999998654321 122345789999999999999999999999999999999999999965432111
Q ss_pred HHHHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCC
Q 005224 592 EVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSK 671 (707)
Q Consensus 592 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~d 671 (707)
... +.... .|... . ....++...+|+.+||..|
T Consensus 250 -~~~-----------------------------~~~~~--~~~~~-~--------------~~~~~~~l~~li~~~l~~d 282 (321)
T 2c30_A 250 -MKR-----------------------------LRDSP--PPKLK-N--------------SHKVSPVLRDFLERMLVRD 282 (321)
T ss_dssp -HHH-----------------------------HHHSS--CCCCT-T--------------GGGSCHHHHHHHHHHSCSS
T ss_pred -HHH-----------------------------HhcCC--CCCcC-c--------------cccCCHHHHHHHHHHccCC
Confidence 000 00000 00000 0 0001122346788899999
Q ss_pred CCCCCCCCcCCCCCCCCCCCC
Q 005224 672 EETPPSSSSMLKHPYVSSDVS 692 (707)
Q Consensus 672 P~~R~sa~e~L~Hp~f~~~~~ 692 (707)
|++|||++|+|+||||.....
T Consensus 283 p~~Rps~~ell~hp~~~~~~~ 303 (321)
T 2c30_A 283 PQERATAQELLDHPFLLQTGL 303 (321)
T ss_dssp TTTSCCHHHHHTSGGGGGCCC
T ss_pred hhhCcCHHHHhcChhhccCCC
Confidence 999999999999999976544
No 33
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=2.7e-44 Score=375.09 Aligned_cols=276 Identities=24% Similarity=0.394 Sum_probs=211.1
Q ss_pred cCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCCh--hhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEe
Q 005224 375 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 451 (707)
Q Consensus 375 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E 451 (707)
++|++.+.||+|+||+||+|... +++.||||++..... ...+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 81 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence 57899999999999999999975 689999999875432 234678899999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCC
Q 005224 452 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 531 (707)
Q Consensus 452 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 531 (707)
|+++ ++.+.+... ...+++..++.++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 82 ~~~~-~l~~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lH~~~---ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~- 155 (292)
T 3o0g_A 82 FCDQ-DLKKYFDSC-NGDLDPEIVKSFLFQLLKGLGFCHSRN---VLHRDLKPQNLLINRNGELKLANFGLARAFGIPV- 155 (292)
T ss_dssp CCSE-EHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECCSCC-
T ss_pred cCCC-CHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEeecccceecCCcc-
Confidence 9975 666666543 345999999999999999999999999 9999999999999999999999999998764321
Q ss_pred CCccccceecccccCCCccchhhhccCC-CCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCCC
Q 005224 532 EGIVPAHVSTVVKGTPGYLDPEYFLTHK-LTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 610 (707)
Q Consensus 532 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~s~~sDVwS~Gvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 610 (707)
.......||+.|+|||++.+.. ++.++|||||||++|||++|..||....+..+.......
T Consensus 156 ------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~------------ 217 (292)
T 3o0g_A 156 ------RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFR------------ 217 (292)
T ss_dssp ------SCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHH------------
T ss_pred ------ccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHH------------
Confidence 2233456899999999998765 899999999999999999999997665554333322211
Q ss_pred CCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH--------HHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCC
Q 005224 611 GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRE--------LESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSML 682 (707)
Q Consensus 611 ~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~--------L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L 682 (707)
.+-...+...+.+.+.... ........+..++...+||.+||+.||++|||++|+|
T Consensus 218 ----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l 281 (292)
T 3o0g_A 218 ----------------LLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEAL 281 (292)
T ss_dssp ----------------HHCCCCTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHH
T ss_pred ----------------HhCCCChhhhhhhcccccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHh
Confidence 1111111111111100000 0000111222334446899999999999999999999
Q ss_pred CCCCCCCC
Q 005224 683 KHPYVSSD 690 (707)
Q Consensus 683 ~Hp~f~~~ 690 (707)
+||||+..
T Consensus 282 ~hp~f~~~ 289 (292)
T 3o0g_A 282 QHPYFSDF 289 (292)
T ss_dssp TSGGGTTC
T ss_pred cCcccccC
Confidence 99999864
No 34
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=6.8e-44 Score=376.56 Aligned_cols=199 Identities=24% Similarity=0.419 Sum_probs=177.4
Q ss_pred hcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCCh---hhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEE
Q 005224 374 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 449 (707)
Q Consensus 374 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV 449 (707)
.++|++.+.||+|+||+||+|... +|+.||+|++..... ...+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv 84 (318)
T 1fot_A 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMI 84 (318)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEE
Confidence 357889999999999999999975 799999999875322 2345788999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCC
Q 005224 450 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 529 (707)
Q Consensus 450 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~ 529 (707)
|||+++|+|.+++... ..+++..++.++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 85 ~e~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~- 158 (318)
T 1fot_A 85 MDYIEGGELFSLLRKS--QRFPNPVAKFYAAEVCLALEYLHSKD---IIYRDLKPENILLDKNGHIKITDFGFAKYVPD- 158 (318)
T ss_dssp ECCCCSCBHHHHHHHT--SSCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEECTTSCEEECCCSSCEECSS-
T ss_pred EeCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChheEEEcCCCCEEEeecCcceecCC-
Confidence 9999999999999764 35899999999999999999999998 99999999999999999999999999986532
Q ss_pred CCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCc
Q 005224 530 DIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 587 (707)
Q Consensus 530 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~elltG~~pf~~~~ 587 (707)
......||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 159 ---------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~ 207 (318)
T 1fot_A 159 ---------VTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSN 207 (318)
T ss_dssp ---------CBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSS
T ss_pred ---------ccccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCC
Confidence 1234579999999999999999999999999999999999999997543
No 35
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=8.4e-44 Score=380.24 Aligned_cols=200 Identities=25% Similarity=0.382 Sum_probs=176.8
Q ss_pred hcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCC---hhhHHHHHHHHHHHHcc-CCCcceeEEEEEEeCCeEEE
Q 005224 374 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQML 448 (707)
Q Consensus 374 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~l 448 (707)
.++|+..+.||+|+||.||+|+.+ +++.||+|++.... ....+.+.+|..+++++ +||||+++++++.+.+..++
T Consensus 8 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l 87 (345)
T 3a8x_A 8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 87 (345)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEE
Confidence 357889999999999999999975 68999999997542 23345688999999988 89999999999999999999
Q ss_pred EEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCC
Q 005224 449 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 528 (707)
Q Consensus 449 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~ 528 (707)
||||+++|+|.+++.... .+++..++.++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 88 v~e~~~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~ 162 (345)
T 3a8x_A 88 VIEYVNGGDLMFHMQRQR--KLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR 162 (345)
T ss_dssp EECCCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCGGGCBCSCC
T ss_pred EEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCHHHEEECCCCCEEEEeccccccccC
Confidence 999999999999997643 5899999999999999999999999 99999999999999999999999999985432
Q ss_pred CCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCC
Q 005224 529 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISH 585 (707)
Q Consensus 529 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~elltG~~pf~~ 585 (707)
. ........||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 163 ~-------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~ 212 (345)
T 3a8x_A 163 P-------GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI 212 (345)
T ss_dssp T-------TCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred C-------CCcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCC
Confidence 1 1223456799999999999999999999999999999999999999964
No 36
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=9.6e-44 Score=382.42 Aligned_cols=301 Identities=19% Similarity=0.243 Sum_probs=225.7
Q ss_pred CcccccHHHHHHHhcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHccC-----CCcce
Q 005224 361 GVRSFTYGEMALATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLH-----HRNLV 434 (707)
Q Consensus 361 ~~~~~~~~~l~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-----H~nIv 434 (707)
....+++.+.....++|.+.++||+|+||+||+|... +++.||||++.. .....+.+..|+++++.++ ||||+
T Consensus 21 ~~~~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~-~~~~~~~~~~e~~~l~~l~~~~~~h~~iv 99 (360)
T 3llt_A 21 EIVHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRN-IKKYTRSAKIEADILKKIQNDDINNNNIV 99 (360)
T ss_dssp GGGSCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECS-CHHHHHHHHHHHHHHHHTCCCSTTGGGBC
T ss_pred cceeeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEecc-chhhhhhhHHHHHHHHHhcccCCCCCCee
Confidence 4456777777788899999999999999999999974 789999999975 2344567788999999996 99999
Q ss_pred eEEEEEEeCCeEEEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcC---
Q 005224 435 SLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDH--- 511 (707)
Q Consensus 435 ~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~--- 511 (707)
++++++...+..++||||+ +++|.+++.......+++..++.++.||+.||+|||+.+ |+||||||+|||++.
T Consensus 100 ~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~ 175 (360)
T 3llt_A 100 KYHGKFMYYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMS---LTHTDLKPENILLDDPYF 175 (360)
T ss_dssp CEEEEEEETTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCTTC
T ss_pred cccceeeECCeeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCcccEEEccccc
Confidence 9999999999999999999 899999998876667999999999999999999999999 999999999999975
Q ss_pred ----------------------CCcEEEeeecccccCCCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHH
Q 005224 512 ----------------------KFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSL 569 (707)
Q Consensus 512 ----------------------~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~ 569 (707)
++.+||+|||+++..... .....||+.|+|||++.+..++.++|||||
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~----------~~~~~gt~~y~aPE~~~~~~~~~~~Diwsl 245 (360)
T 3llt_A 176 EKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDY----------HGSIINTRQYRAPEVILNLGWDVSSDMWSF 245 (360)
T ss_dssp CEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSC----------CCSCCSCGGGCCHHHHTTCCCCTTHHHHHH
T ss_pred cccccchhcccccccccccccCCCCEEEEeccCceecCCC----------CcCccCcccccCcHHHcCCCCCCccchHHH
Confidence 789999999999864321 234568999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCCCCCCChHHHHHHHHHHHH-------hcccCCCCCCCHHHH
Q 005224 570 GVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALK-------CCQDETDARPSMSEV 642 (707)
Q Consensus 570 Gvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-------c~~~~p~~RPt~~~v 642 (707)
||++|||++|+.||....... ....... .....+............. .....|.........
T Consensus 246 G~il~ell~g~~pf~~~~~~~-~~~~~~~----------~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 314 (360)
T 3llt_A 246 GCVLAELYTGSLLFRTHEHME-HLAMMES----------IIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSI 314 (360)
T ss_dssp HHHHHHHHHSSCSCCCSSHHH-HHHHHHH----------HTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHH
T ss_pred HHHHHHHHHCCCCCCCCcHHH-HHHHHHH----------hcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhh
Confidence 999999999999997654322 1111100 0112222222111100000 001112222222221
Q ss_pred HHHHHHhhh-cCCCCCCCCCccccCCCCCCCCCCCCCCcCCCCCCCC
Q 005224 643 MRELESIWN-MMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVS 688 (707)
Q Consensus 643 ~~~L~~~~~-~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f~ 688 (707)
. .+..... .....++.+.+||.+||+.||++|||++|+|+||||.
T Consensus 315 ~-~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpta~elL~hp~f~ 360 (360)
T 3llt_A 315 K-HVKKCLPLYKIIKHELFCDFLYSILQIDPTLRPSPAELLKHKFLE 360 (360)
T ss_dssp H-HHHTCCCHHHHCCCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGC
T ss_pred h-hhhhcccccccchHHHHHHHHHHHhcCChhhCCCHHHHhcCcccC
Confidence 1 1111000 0011234455899999999999999999999999995
No 37
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=6.9e-44 Score=380.45 Aligned_cols=260 Identities=22% Similarity=0.327 Sum_probs=208.4
Q ss_pred HHHhcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCC---hhhHHHHHHHHHHHHcc-CCCcceeEEEEEEeCCe
Q 005224 371 ALATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGE 445 (707)
Q Consensus 371 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~ 445 (707)
....++|.+.+.||+|+||+||+|+.+ +|+.||||+++... ....+.+..|..+++.+ +||||+++++++.+.+.
T Consensus 13 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~ 92 (345)
T 1xjd_A 13 KLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKEN 92 (345)
T ss_dssp ---CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSE
T ss_pred CCChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCE
Confidence 345678999999999999999999975 68999999997532 12345678899999887 99999999999999999
Q ss_pred EEEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeeccccc
Q 005224 446 QMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRL 525 (707)
Q Consensus 446 ~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~ 525 (707)
.++||||+++|+|.+++.... .+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++.
T Consensus 93 ~~lv~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~vkL~DFG~a~~ 167 (345)
T 1xjd_A 93 LFFVMEYLNGGDLMYHIQSCH--KFDLSRATFYAAEIILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKE 167 (345)
T ss_dssp EEEEEECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred EEEEEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCChhhEEECCCCCEEEeEChhhhh
Confidence 999999999999999997643 4899999999999999999999999 99999999999999999999999999985
Q ss_pred CCCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhh
Q 005224 526 APVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSV 605 (707)
Q Consensus 526 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~ 605 (707)
..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||...... ..
T Consensus 168 ~~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~-~~------------- 226 (345)
T 1xjd_A 168 NMLGD-------AKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEE-EL------------- 226 (345)
T ss_dssp CCCTT-------CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HH-------------
T ss_pred cccCC-------CcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHH-HH-------------
Confidence 43221 1234567999999999999999999999999999999999999999653321 10
Q ss_pred ccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCC-cCCCC
Q 005224 606 IDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSS-SMLKH 684 (707)
Q Consensus 606 ~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~-e~L~H 684 (707)
.+.+... .+.- | ...++.+.+||.+||+.||++|+++. |+++|
T Consensus 227 ----------------~~~i~~~---~~~~-p----------------~~~s~~~~~li~~lL~~dp~~R~~~~~~i~~h 270 (345)
T 1xjd_A 227 ----------------FHSIRMD---NPFY-P----------------RWLEKEAKDLLVKLFVREPEKRLGVRGDIRQH 270 (345)
T ss_dssp ----------------HHHHHHC---CCCC-C----------------TTSCHHHHHHHHHHSCSSGGGSBTTBSCGGGS
T ss_pred ----------------HHHHHhC---CCCC-C----------------cccCHHHHHHHHHHhcCCHhHcCCChHHHHcC
Confidence 0111100 0000 0 01122334788889999999999998 99999
Q ss_pred CCCCCCCC
Q 005224 685 PYVSSDVS 692 (707)
Q Consensus 685 p~f~~~~~ 692 (707)
|||.+-.+
T Consensus 271 p~f~~~~w 278 (345)
T 1xjd_A 271 PLFREINW 278 (345)
T ss_dssp GGGTTCCH
T ss_pred ccccCCCH
Confidence 99987543
No 38
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=7.5e-44 Score=388.57 Aligned_cols=213 Identities=28% Similarity=0.314 Sum_probs=183.9
Q ss_pred ccHHHHHHHhcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCChh---hHHHHHHHHHHHHccCCCcceeEEEEE
Q 005224 365 FTYGEMALATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ---GEKEFLTEIQFLSRLHHRNLVSLVGYC 440 (707)
Q Consensus 365 ~~~~~l~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~---~~~~~~~E~~~l~~l~H~nIv~l~~~~ 440 (707)
+.+++.....++|++.+.||+|+||+||+|+.+ +|+.||||++...... ..+.+.+|..++..++||||+++++++
T Consensus 51 ~~~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~ 130 (412)
T 2vd5_A 51 VRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAF 130 (412)
T ss_dssp HHHHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEE
T ss_pred hhhhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEE
Confidence 445566677889999999999999999999975 7999999999753221 123478899999999999999999999
Q ss_pred EeCCeEEEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeee
Q 005224 441 DEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADF 520 (707)
Q Consensus 441 ~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DF 520 (707)
.+.+..++||||+++|+|.+++.+.+ ..+++..++.++.||+.||+|||+.+ |+||||||+|||++.++++||+||
T Consensus 131 ~~~~~~~lVmE~~~gg~L~~~l~~~~-~~l~~~~~~~~~~qi~~aL~~LH~~g---iiHrDLKp~NILld~~g~vkL~DF 206 (412)
T 2vd5_A 131 QDENYLYLVMEYYVGGDLLTLLSKFG-ERIPAEMARFYLAEIVMAIDSVHRLG---YVHRDIKPDNILLDRCGHIRLADF 206 (412)
T ss_dssp ECSSEEEEEECCCCSCBHHHHHHHHS-SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCC
T ss_pred eeCCEEEEEEcCCCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCC---eeecccCHHHeeecCCCCEEEeec
Confidence 99999999999999999999997643 35899999999999999999999999 999999999999999999999999
Q ss_pred cccccCCCCCCCCccccceecccccCCCccchhhhc-------cCCCCCchhhHHHHHHHHHHHcCCCCCCCCc
Q 005224 521 GLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFL-------THKLTDKSDVYSLGVVFLELLTGMQPISHGK 587 (707)
Q Consensus 521 Gla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-------~~~~s~~sDVwS~Gvll~elltG~~pf~~~~ 587 (707)
|+++...... ........||+.|+|||++. +..++.++|||||||++|||++|+.||....
T Consensus 207 Gla~~~~~~~------~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~ 274 (412)
T 2vd5_A 207 GSCLKLRADG------TVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADS 274 (412)
T ss_dssp TTCEECCTTS------CEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSS
T ss_pred hhheeccCCC------ccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCC
Confidence 9998764322 11233467999999999997 3578999999999999999999999997543
No 39
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=8.5e-44 Score=387.07 Aligned_cols=307 Identities=19% Similarity=0.219 Sum_probs=213.2
Q ss_pred hcCCCccceEeee--CceEEEEEEeC-CCcEEEEEEeccCC--hhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEE
Q 005224 374 TNNFNSSTQIGQG--GYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 448 (707)
Q Consensus 374 ~~~~~~~~~lG~G--~~g~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~l 448 (707)
.++|++.+.||+| +||+||+|... +++.||||++.... ....+.+.+|+++++.++||||+++++++.+.+..++
T Consensus 24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 103 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWV 103 (389)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEE
Confidence 4679999999999 99999999976 79999999987543 2334678899999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCC
Q 005224 449 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 528 (707)
Q Consensus 449 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~ 528 (707)
||||+++|+|.+++.......+++..++.++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||.+.....
T Consensus 104 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~ 180 (389)
T 3gni_B 104 VTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMG---YVHRSVKASHILISVDGKVYLSGLRSNLSMIS 180 (389)
T ss_dssp EEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCGGGCEECEE
T ss_pred EEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEcccccceeecc
Confidence 999999999999998776667999999999999999999999999 99999999999999999999999999865432
Q ss_pred CCCCCccccceecccccCCCccchhhhcc--CCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhc
Q 005224 529 PDIEGIVPAHVSTVVKGTPGYLDPEYFLT--HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVI 606 (707)
Q Consensus 529 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~s~~sDVwS~Gvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~ 606 (707)
................||+.|+|||++.+ ..++.++|||||||++|||++|+.||............. ........
T Consensus 181 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~--~~~~~~~~ 258 (389)
T 3gni_B 181 HGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKL--NGTVPCLL 258 (389)
T ss_dssp TTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC-----------
T ss_pred ccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHh--cCCCCccc
Confidence 21111111112233478999999999987 679999999999999999999999997543321111100 00000000
Q ss_pred cCCCCCCChHHH-----HHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcC
Q 005224 607 DGNMGSYPSECV-----EKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSM 681 (707)
Q Consensus 607 ~~~~~~~~~~~~-----~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~ 681 (707)
+... .+.+.. .................||...+.. ........++.+.+||.+||+.||++|||++|+
T Consensus 259 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~el 331 (389)
T 3gni_B 259 DTST--IPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSP-----SHPYHRTFSPHFHHFVEQCLQRNPDARPSASTL 331 (389)
T ss_dssp ------------------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHH
T ss_pred cccc--cccccccccccccccccccccccccCccccccCCCC-----CCccccccCHHHHHHHHHHhhcCcccCCCHHHH
Confidence 0000 000000 0000000000000001111111000 001112234456689999999999999999999
Q ss_pred CCCCCCCCCCC
Q 005224 682 LKHPYVSSDVS 692 (707)
Q Consensus 682 L~Hp~f~~~~~ 692 (707)
|+||||.....
T Consensus 332 l~hp~f~~~~~ 342 (389)
T 3gni_B 332 LNHSFFKQIKR 342 (389)
T ss_dssp TTSGGGGGC--
T ss_pred hcCHHHHHHhh
Confidence 99999986543
No 40
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=6.1e-44 Score=371.74 Aligned_cols=274 Identities=23% Similarity=0.335 Sum_probs=206.1
Q ss_pred cCCCccceEeeeCceEEEEEEeCCCcEEEEEEeccCChh--hHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEec
Q 005224 375 NNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQ--GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 452 (707)
Q Consensus 375 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~--~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E~ 452 (707)
++|++.+.||+|+||+||+|...+|+.||+|++...... ..+.+.+|++++++++||||+++++++...+..++||||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence 578899999999999999999988999999998754332 236788999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCC
Q 005224 453 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 532 (707)
Q Consensus 453 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 532 (707)
+++ +|.+++... ...+++..++.++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 82 ~~~-~l~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-- 154 (288)
T 1ob3_A 82 LDQ-DLKKLLDVC-EGGLESVTAKSFLLQLLNGIAYCHDRR---VLHRDLKPQNLLINREGELKIADFGLARAFGIPV-- 154 (288)
T ss_dssp CSE-EHHHHHHTS-TTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECCTTHHHHHCC----
T ss_pred cCC-CHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCCEEEeECccccccCccc--
Confidence 975 999998654 345899999999999999999999998 9999999999999999999999999998653211
Q ss_pred CccccceecccccCCCccchhhhcc-CCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCCCC
Q 005224 533 GIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 611 (707)
Q Consensus 533 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDVwS~Gvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 611 (707)
.......||+.|+|||++.+ ..++.++|||||||++|||++|+.||........ ....
T Consensus 155 -----~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~-~~~~--------------- 213 (288)
T 1ob3_A 155 -----RKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQ-LMRI--------------- 213 (288)
T ss_dssp ------------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHH---------------
T ss_pred -----cccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHH---------------
Confidence 12234568999999999976 4589999999999999999999999975443211 1111
Q ss_pred CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH--------HhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCCC
Q 005224 612 SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELE--------SIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLK 683 (707)
Q Consensus 612 ~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~--------~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~ 683 (707)
....-.......|...+....-. .........++...+||.+||..||++|||++|+|+
T Consensus 214 -------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 280 (288)
T 1ob3_A 214 -------------FRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280 (288)
T ss_dssp -------------HHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred -------------HHHHCCCChhhchhhhcccccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 00000011111111000000000 000111223334458999999999999999999999
Q ss_pred CCCCCC
Q 005224 684 HPYVSS 689 (707)
Q Consensus 684 Hp~f~~ 689 (707)
||||..
T Consensus 281 hp~f~~ 286 (288)
T 1ob3_A 281 HAYFKE 286 (288)
T ss_dssp SGGGGC
T ss_pred Ccchhh
Confidence 999975
No 41
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.5e-43 Score=374.58 Aligned_cols=259 Identities=19% Similarity=0.337 Sum_probs=209.4
Q ss_pred hcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEec
Q 005224 374 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 452 (707)
Q Consensus 374 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E~ 452 (707)
.++|++.+.||+|+||+||+|... +++.||+|.+.... .....+.+|+++++.++||||+++++++.+.+..++||||
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~ 82 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF 82 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc-ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEe
Confidence 468999999999999999999975 68999999987543 3456788999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcC--CCcEEEeeecccccCCCCC
Q 005224 453 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDH--KFTAKVADFGLSRLAPVPD 530 (707)
Q Consensus 453 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~--~~~~kl~DFGla~~~~~~~ 530 (707)
+++|+|.+++... ...+++..++.++.|++.||+|||+.+ |+||||||+|||++. ++.+||+|||+++.....
T Consensus 83 ~~g~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~g---ivH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~- 157 (321)
T 1tki_A 83 ISGLDIFERINTS-AFELNEREIVSYVHQVCEALQFLHSHN---IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPG- 157 (321)
T ss_dssp CCCCBHHHHHTSS-SCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSSSCCCEEECCCTTCEECCTT-
T ss_pred CCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCC---CCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCC-
Confidence 9999999999653 345899999999999999999999999 999999999999987 789999999999876432
Q ss_pred CCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCCC
Q 005224 531 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 610 (707)
Q Consensus 531 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 610 (707)
.......||+.|+|||++.+..++.++|||||||++|||++|..||...... ....... ...
T Consensus 158 -------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-~~~~~i~---------~~~- 219 (321)
T 1tki_A 158 -------DNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQ-QIIENIM---------NAE- 219 (321)
T ss_dssp -------CEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHH-HHHHHHH---------HTC-
T ss_pred -------CccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHH-HHHHHHH---------cCC-
Confidence 2234457899999999999988999999999999999999999999754331 1111000 000
Q ss_pred CCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCCCCCCCCCC
Q 005224 611 GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSSD 690 (707)
Q Consensus 611 ~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f~~~ 690 (707)
..++.. ..+..+..+.+|+.+||..||++|||++|+|+||||...
T Consensus 220 ~~~~~~-----------------------------------~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~hp~~~~~ 264 (321)
T 1tki_A 220 YTFDEE-----------------------------------AFKEISIEAMDFVDRLLVKERKSRMTASEALQHPWLKQK 264 (321)
T ss_dssp CCCCHH-----------------------------------HHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHSC
T ss_pred CCCChh-----------------------------------hhccCCHHHHHHHHHHcCCChhHCcCHHHHhcChhhccC
Confidence 000100 011223334578888999999999999999999998765
Q ss_pred C
Q 005224 691 V 691 (707)
Q Consensus 691 ~ 691 (707)
.
T Consensus 265 ~ 265 (321)
T 1tki_A 265 I 265 (321)
T ss_dssp G
T ss_pred c
Confidence 4
No 42
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=7.3e-43 Score=376.84 Aligned_cols=262 Identities=25% Similarity=0.474 Sum_probs=217.7
Q ss_pred hcCCCccceEeeeCceEEEEEEe--------CCCcEEEEEEeccCCh-hhHHHHHHHHHHHHcc-CCCcceeEEEEEEeC
Q 005224 374 TNNFNSSTQIGQGGYGKVYKGIL--------PDGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEE 443 (707)
Q Consensus 374 ~~~~~~~~~lG~G~~g~Vy~~~~--------~~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~ 443 (707)
.++|++.+.||+|+||+||+|.+ .++..||||++..... ...+.+.+|+++++.+ +||||++++++|...
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 159 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 159 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence 46788999999999999999985 2456899999976533 3346799999999999 899999999999999
Q ss_pred CeEEEEEecCCCCCHHHHHhhcCC--------------CCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEE
Q 005224 444 GEQMLVYEFMSNGTLRDQLSAKSK--------------EPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILL 509 (707)
Q Consensus 444 ~~~~lV~E~~~~gsL~~~l~~~~~--------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl 509 (707)
+..++||||+++|+|.+++..... ..+++..++.++.||++||+|||+++ |+||||||+|||+
T Consensus 160 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll 236 (370)
T 2psq_A 160 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK---CIHRDLAARNVLV 236 (370)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEE
T ss_pred CCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---eeccccchhhEEE
Confidence 999999999999999999976432 35899999999999999999999999 9999999999999
Q ss_pred cCCCcEEEeeecccccCCCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc-CCCCCCCCch
Q 005224 510 DHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKN 588 (707)
Q Consensus 510 ~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~ellt-G~~pf~~~~~ 588 (707)
+.++.+||+|||+++........ .......+|+.|+|||++.+..++.++|||||||++|||++ |+.||.....
T Consensus 237 ~~~~~~kl~DFG~a~~~~~~~~~-----~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~ 311 (370)
T 2psq_A 237 TENNVMKIADFGLARDINNIDYY-----KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV 311 (370)
T ss_dssp CTTCCEEECCCSSCEETTCCCTT-----CTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCG
T ss_pred CCCCCEEEccccCCcccCcccce-----ecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCH
Confidence 99999999999999866433211 11223456789999999999999999999999999999999 9999965432
Q ss_pred hHHHHHHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcC
Q 005224 589 IVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMM 653 (707)
Q Consensus 589 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~ 653 (707)
. +. ...+..+.....+..++..+.+++.+||+.+|.+||++.++++.|+.+....
T Consensus 312 ~-~~---------~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~~~ 366 (370)
T 2psq_A 312 E-EL---------FKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLT 366 (370)
T ss_dssp G-GH---------HHHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred H-HH---------HHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHh
Confidence 1 11 1112223334456677788999999999999999999999999999887643
No 43
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=2.9e-43 Score=382.75 Aligned_cols=305 Identities=25% Similarity=0.347 Sum_probs=208.4
Q ss_pred HhcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccC--ChhhHHHHHHHHHHHHccC-CCcceeEEEEEEeCC--eE
Q 005224 373 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEG--SLQGEKEFLTEIQFLSRLH-HRNLVSLVGYCDEEG--EQ 446 (707)
Q Consensus 373 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~--~~ 446 (707)
..++|++.+.||+|+||+||+|... +|+.||||++... .....+.+.+|+.+++.+. ||||+++++++...+ ..
T Consensus 7 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~ 86 (388)
T 3oz6_A 7 VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDV 86 (388)
T ss_dssp HHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCE
T ss_pred ccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEE
Confidence 4578999999999999999999964 7899999998643 3344567889999999997 999999999997554 78
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccC
Q 005224 447 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 526 (707)
Q Consensus 447 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~ 526 (707)
++|||||+ ++|.+++... .+++..+..++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+|+..
T Consensus 87 ~lv~e~~~-~~L~~~~~~~---~~~~~~~~~i~~qi~~~L~~LH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~~ 159 (388)
T 3oz6_A 87 YLVFDYME-TDLHAVIRAN---ILEPVHKQYVVYQLIKVIKYLHSGG---LLHRDMKPSNILLNAECHVKVADFGLSRSF 159 (388)
T ss_dssp EEEEECCS-EEHHHHHHHT---CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEES
T ss_pred EEEecccC-cCHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCCCHHHeEEcCCCCEEecCCcccccc
Confidence 99999996 6999999753 5899999999999999999999999 999999999999999999999999999865
Q ss_pred CCCCCCC--------------ccccceecccccCCCccchhhhcc-CCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHH
Q 005224 527 PVPDIEG--------------IVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVR 591 (707)
Q Consensus 527 ~~~~~~~--------------~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDVwS~Gvll~elltG~~pf~~~~~~~~ 591 (707)
....... ...........||+.|+|||++.+ ..++.++|||||||++|||++|+.||...... +
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~-~ 238 (388)
T 3oz6_A 160 VNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTM-N 238 (388)
T ss_dssp SSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-H
T ss_pred cccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHH-H
Confidence 4311000 001122344679999999999987 67999999999999999999999999765442 2
Q ss_pred HHHHHhhcccc--hhhccCCCCCCChHHHHHHHHHHHHhccc-CCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCC
Q 005224 592 EVNIAYQSSMM--FSVIDGNMGSYPSECVEKFIKLALKCCQD-ETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEH 668 (707)
Q Consensus 592 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~l~~~c~~~-~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L 668 (707)
.+......... ...+......+. ..+.+-....... ....+..+......+... ......++.+.|||.+||
T Consensus 239 ~~~~i~~~~~~p~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~dll~~~L 313 (388)
T 3oz6_A 239 QLERIIGVIDFPSNEDVESIQSPFA----KTMIESLKEKVEIRQSNKRDIFTKWKNLLLKI-NPKADCNEEALDLLDKLL 313 (388)
T ss_dssp HHHHHHHHHCCCCHHHHHTSCCSSH----HHHHHHHHHHCC-----CCCCHHHHHHHHHHH-CTTCCCCHHHHHHHHHHC
T ss_pred HHHHHHHhcCCCCHHHHHhccCHHH----HHHHHhCcccccccCCCHHHhCcchhhhcccc-cccccCCHHHHHHHHHhh
Confidence 22221110000 000000001111 1111111111111 112222333332222221 122344556789999999
Q ss_pred CCCCCCCCCCCcCCCCCCCCCC
Q 005224 669 TSKEETPPSSSSMLKHPYVSSD 690 (707)
Q Consensus 669 ~~dP~~R~sa~e~L~Hp~f~~~ 690 (707)
++||++|+|++|+|+||||+.-
T Consensus 314 ~~dP~~R~t~~e~l~Hp~~~~~ 335 (388)
T 3oz6_A 314 QFNPNKRISANDALKHPFVSIF 335 (388)
T ss_dssp CSSGGGSCCHHHHTTSTTTTTT
T ss_pred ccCcccCCCHHHHhCCHHHHHh
Confidence 9999999999999999999754
No 44
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=8e-43 Score=377.95 Aligned_cols=260 Identities=22% Similarity=0.399 Sum_probs=212.1
Q ss_pred hcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEec
Q 005224 374 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 452 (707)
Q Consensus 374 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E~ 452 (707)
.++|++.+.||+|+||+||+|... +|+.||+|++..........+.+|+++++.++||||+++++++.+.+..++||||
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~ 129 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF 129 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEc
Confidence 357999999999999999999975 7899999999876655667899999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcC--CCcEEEeeecccccCCCCC
Q 005224 453 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDH--KFTAKVADFGLSRLAPVPD 530 (707)
Q Consensus 453 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~--~~~~kl~DFGla~~~~~~~ 530 (707)
+++|+|.+++... ...+++..++.++.||+.||+|||+.+ |+||||||+|||++. ++.+||+|||+++......
T Consensus 130 ~~gg~L~~~l~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~ 205 (387)
T 1kob_A 130 LSGGELFDRIAAE-DYKMSEAEVINYMRQACEGLKHMHEHS---IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDE 205 (387)
T ss_dssp CCCCBHHHHTTCT-TCCBCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTS
T ss_pred CCCCcHHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccchHHeEEecCCCCceEEEecccceecCCCc
Confidence 9999999999653 345999999999999999999999999 999999999999974 5789999999998764321
Q ss_pred CCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCCC
Q 005224 531 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 610 (707)
Q Consensus 531 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 610 (707)
......||+.|+|||++.+..++.++|||||||++|||++|+.||...... ...
T Consensus 206 --------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~-~~~----------------- 259 (387)
T 1kob_A 206 --------IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDL-ETL----------------- 259 (387)
T ss_dssp --------CEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHH-HHH-----------------
T ss_pred --------ceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHH-HHH-----------------
Confidence 223446899999999999999999999999999999999999999754321 111
Q ss_pred CCCChHHHHHHHHHHHHh-cccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCCCCCCCCC
Q 005224 611 GSYPSECVEKFIKLALKC-CQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSS 689 (707)
Q Consensus 611 ~~~~~~~~~~l~~l~~~c-~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f~~ 689 (707)
.-+..+ +...+.. ....++.+.+||.+||..||++|||++|+|+||||.+
T Consensus 260 ------------~~i~~~~~~~~~~~-----------------~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 310 (387)
T 1kob_A 260 ------------QNVKRCDWEFDEDA-----------------FSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPWLKG 310 (387)
T ss_dssp ------------HHHHHCCCCCCSST-----------------TTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTSTTTSS
T ss_pred ------------HHHHhCCCCCCccc-----------------cccCCHHHHHHHHHHcCCChhHCcCHHHHhhCccccC
Confidence 011111 1111100 1112233457889999999999999999999999987
Q ss_pred CCC
Q 005224 690 DVS 692 (707)
Q Consensus 690 ~~~ 692 (707)
...
T Consensus 311 ~~~ 313 (387)
T 1kob_A 311 DHS 313 (387)
T ss_dssp CCT
T ss_pred Ccc
Confidence 644
No 45
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=2.2e-43 Score=377.59 Aligned_cols=198 Identities=23% Similarity=0.355 Sum_probs=177.4
Q ss_pred cCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCCh---hhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEE
Q 005224 375 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 450 (707)
Q Consensus 375 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~ 450 (707)
++|+..+.||+|+||.||+|... +|+.||||++..... ...+.+.+|+++++.++||||+++++++.+.+..++||
T Consensus 41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 120 (350)
T 1rdq_E 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEE
Confidence 57889999999999999999975 799999999865322 23467889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCC
Q 005224 451 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 530 (707)
Q Consensus 451 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~ 530 (707)
||+++|+|.+++.... .+++..++.++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 121 e~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~- 194 (350)
T 1rdq_E 121 EYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR- 194 (350)
T ss_dssp ECCTTCBHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECSSC-
T ss_pred cCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---cccccCccceEEECCCCCEEEcccccceeccCC-
Confidence 9999999999997653 4899999999999999999999999 999999999999999999999999999865321
Q ss_pred CCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCc
Q 005224 531 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 587 (707)
Q Consensus 531 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~elltG~~pf~~~~ 587 (707)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 195 ---------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~ 242 (350)
T 1rdq_E 195 ---------TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQ 242 (350)
T ss_dssp ---------BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred ---------cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCC
Confidence 234578999999999999999999999999999999999999997543
No 46
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=9.5e-44 Score=375.64 Aligned_cols=293 Identities=22% Similarity=0.394 Sum_probs=200.3
Q ss_pred hcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCChh-hHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEe
Q 005224 374 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ-GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 451 (707)
Q Consensus 374 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~-~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E 451 (707)
.++|++.+.||+|+||+||+|... +|+.||||++...... ..+.+.+|++++++++||||+++++++..++..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 83 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFE 83 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEE
Confidence 468999999999999999999965 6899999998754322 34678899999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcC----CCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCC
Q 005224 452 FMSNGTLRDQLSAKS----KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAP 527 (707)
Q Consensus 452 ~~~~gsL~~~l~~~~----~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~ 527 (707)
|++ |+|.+++.... ...+++..++.++.||++||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 84 ~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 159 (317)
T 2pmi_A 84 FMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENK---ILHRDLKPQNLLINKRGQLKLGDFGLARAFG 159 (317)
T ss_dssp CCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCSSCEETT
T ss_pred ecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCChHHeEEcCCCCEEECcCccceecC
Confidence 997 69999987532 245899999999999999999999998 9999999999999999999999999998754
Q ss_pred CCCCCCccccceecccccCCCccchhhhcc-CCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhc
Q 005224 528 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVI 606 (707)
Q Consensus 528 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDVwS~Gvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~ 606 (707)
... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||....... ........ .
T Consensus 160 ~~~-------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~i~~~------~ 225 (317)
T 2pmi_A 160 IPV-------NTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEE-QLKLIFDI------M 225 (317)
T ss_dssp SCC-------CCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHH------H
T ss_pred CCc-------ccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHH------h
Confidence 321 12234568999999999987 468999999999999999999999997554321 11111110 0
Q ss_pred cCCCCCCChHHHHHHHHHHHHhcccCCCCCC--CHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCCCC
Q 005224 607 DGNMGSYPSECVEKFIKLALKCCQDETDARP--SMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKH 684 (707)
Q Consensus 607 ~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RP--t~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~H 684 (707)
........ ..+.++. -+..+...++ ...+. +.. ......+..+.+||.+||+.||++|||++|+|+|
T Consensus 226 ~~~~~~~~----~~~~~~~--~~~~~~~~~~~~~~~~~---~~~--~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~h 294 (317)
T 2pmi_A 226 GTPNESLW----PSVTKLP--KYNPNIQQRPPRDLRQV---LQP--HTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHH 294 (317)
T ss_dssp CSCCTTTC----GGGGGCT--TCCTTCCCCCCCCSHHH---HGG--GCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred CCCChhHh----hhhhhhh--hcccccccccchhHHHh---hcc--cccccCCHHHHHHHHHHCCCCcccCCCHHHHhCC
Confidence 00000000 0000000 0000000111 11111 110 0112234456689999999999999999999999
Q ss_pred CCCCCCCCCCC
Q 005224 685 PYVSSDVSGSN 695 (707)
Q Consensus 685 p~f~~~~~~~~ 695 (707)
|||........
T Consensus 295 p~f~~~~~~~~ 305 (317)
T 2pmi_A 295 PWFAEYYHHAS 305 (317)
T ss_dssp GGGGGGCC---
T ss_pred hhhhcccchhh
Confidence 99987655433
No 47
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=9.9e-43 Score=369.15 Aligned_cols=264 Identities=28% Similarity=0.435 Sum_probs=216.4
Q ss_pred hcCCCccceEeeeCceEEEEEEeC----CCcEEEEEEeccCC-hhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEE
Q 005224 374 TNNFNSSTQIGQGGYGKVYKGILP----DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 448 (707)
Q Consensus 374 ~~~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~l 448 (707)
.++|++.+.||+|+||+||+|.+. .+..||||++.... ....+.+.+|+++++.++||||+++++++.+.+..++
T Consensus 48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 127 (325)
T 3kul_A 48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMI 127 (325)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEE
T ss_pred hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEE
Confidence 457888999999999999999974 45579999998643 3345679999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCC
Q 005224 449 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 528 (707)
Q Consensus 449 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~ 528 (707)
||||+++|+|.+++... ...+++..++.++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 128 v~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 203 (325)
T 3kul_A 128 VTEYMENGSLDTFLRTH-DGQFTIMQLVGMLRGVGAGMRYLSDLG---YVHRDLAARNVLVDSNLVCKVSDFGLSRVLED 203 (325)
T ss_dssp EEECCTTCBHHHHHHTT-TTCSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCSSCEECC-
T ss_pred EeeCCCCCcHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCcceEEECCCCCEEECCCCccccccc
Confidence 99999999999999654 345999999999999999999999999 99999999999999999999999999987653
Q ss_pred CCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHhhcccchhhcc
Q 005224 529 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVID 607 (707)
Q Consensus 529 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 607 (707)
.... ........+|+.|+|||++.+..++.++|||||||++|||++ |..||........ .. .+..
T Consensus 204 ~~~~----~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~-~~---------~~~~ 269 (325)
T 3kul_A 204 DPDA----AYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDV-IS---------SVEE 269 (325)
T ss_dssp ---C----CEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHH-HH---------HHHT
T ss_pred Cccc----eeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHH-HH---------HHHc
Confidence 2211 112233456778999999999999999999999999999999 9999975443211 11 1112
Q ss_pred CCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCC
Q 005224 608 GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPE 655 (707)
Q Consensus 608 ~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~ 655 (707)
+.....+..++..+.+++..||+.+|.+||++.++++.|+.+......
T Consensus 270 ~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~~~ 317 (325)
T 3kul_A 270 GYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSPES 317 (325)
T ss_dssp TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSCC-
T ss_pred CCCCCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCccc
Confidence 223345566778899999999999999999999999999998775443
No 48
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=1.4e-42 Score=365.43 Aligned_cols=269 Identities=23% Similarity=0.422 Sum_probs=216.4
Q ss_pred hcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEec
Q 005224 374 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 452 (707)
Q Consensus 374 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E~ 452 (707)
.++|...+.||+|+||+||+|... +++.||+|++........+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 88 (310)
T 3s95_A 9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEY 88 (310)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEe
Confidence 457888999999999999999975 6899999998776666778899999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCC
Q 005224 453 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 532 (707)
Q Consensus 453 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 532 (707)
+++|+|.+++... ...+++..++.++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+++........
T Consensus 89 ~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 164 (310)
T 3s95_A 89 IKGGTLRGIIKSM-DSQYPWSQRVSFAKDIASGMAYLHSMN---IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQ 164 (310)
T ss_dssp CTTCBHHHHHHHC-CTTSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSTTSEEECTTSCEEECCCTTCEECC-----
T ss_pred cCCCcHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCCcCeEEECCCCCEEEeecccceeccccccc
Confidence 9999999999764 345999999999999999999999999 999999999999999999999999999876433211
Q ss_pred Ccc-------ccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhh
Q 005224 533 GIV-------PAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSV 605 (707)
Q Consensus 533 ~~~-------~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~ 605 (707)
... .........||+.|+|||++.+..++.++|||||||++|||++|..|+......... ........
T Consensus 165 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~-----~~~~~~~~ 239 (310)
T 3s95_A 165 PEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMD-----FGLNVRGF 239 (310)
T ss_dssp ---------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTT-----SSBCHHHH
T ss_pred ccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHH-----Hhhhhhcc
Confidence 000 011112457999999999999999999999999999999999999988642210000 00000000
Q ss_pred ccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCC
Q 005224 606 IDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMP 654 (707)
Q Consensus 606 ~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~ 654 (707)
.. ...+..++..+.+++.+||+.+|++||++.++++.|+.+.....
T Consensus 240 ~~---~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~~~ 285 (310)
T 3s95_A 240 LD---RYCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMHLA 285 (310)
T ss_dssp HH---HTCCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred cc---ccCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhcc
Confidence 00 01234455678999999999999999999999999998876543
No 49
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=6.1e-43 Score=370.94 Aligned_cols=259 Identities=22% Similarity=0.350 Sum_probs=209.1
Q ss_pred hcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCChh------hHHHHHHHHHHHHccCCCcceeEEEEEEeCCeE
Q 005224 374 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ------GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQ 446 (707)
Q Consensus 374 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~------~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~ 446 (707)
.++|++.+.||+|+||+||+|... +|+.||+|++...... ..+.+.+|+.+++.++||||+++++++...+..
T Consensus 10 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 89 (326)
T 2y0a_A 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV 89 (326)
T ss_dssp HHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred ccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence 356889999999999999999975 6899999998754321 356899999999999999999999999999999
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCC----cEEEeeecc
Q 005224 447 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKF----TAKVADFGL 522 (707)
Q Consensus 447 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~----~~kl~DFGl 522 (707)
++||||+++|+|.+++... ..+++..++.++.|++.||.|||+.+ |+||||||+|||++.++ .+||+|||+
T Consensus 90 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~ 164 (326)
T 2y0a_A 90 ILILELVAGGELFDFLAEK--ESLTEEEATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGL 164 (326)
T ss_dssp EEEEECCCSCBHHHHHTTS--SCCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESCSSSSSCCEEECCCTT
T ss_pred EEEEEcCCCCCHHHHHHhc--CCcCHHHHHHHHHHHHHHHHHHHHCC---eEcCCCCHHHEEEecCCCCCCCEEEEECCC
Confidence 9999999999999999653 46999999999999999999999999 99999999999999887 899999999
Q ss_pred cccCCCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccc
Q 005224 523 SRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMM 602 (707)
Q Consensus 523 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~elltG~~pf~~~~~~~~~~~~~~~~~~~ 602 (707)
++...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||........ ......
T Consensus 165 a~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~-~~~~~~---- 231 (326)
T 2y0a_A 165 AHKIDFGN--------EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQET-LANVSA---- 231 (326)
T ss_dssp CEECCTTS--------CCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHH-HHHHHH----
T ss_pred CeECCCCC--------ccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHH-HHHHHh----
Confidence 98764321 12345689999999999999999999999999999999999999965432111 000000
Q ss_pred hhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCC
Q 005224 603 FSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSML 682 (707)
Q Consensus 603 ~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L 682 (707)
. ...++.. ..+..+....+||.+||..||++|||++|+|
T Consensus 232 -----~-~~~~~~~-----------------------------------~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l 270 (326)
T 2y0a_A 232 -----V-NYEFEDE-----------------------------------YFSNTSALAKDFIRRLLVKDPKKRMTIQDSL 270 (326)
T ss_dssp -----T-CCCCCHH-----------------------------------HHTTSCHHHHHHHHHHSCSSGGGSCCHHHHH
T ss_pred -----c-CCCcCcc-----------------------------------ccccCCHHHHHHHHHHccCChhhCCCHHHHh
Confidence 0 0000100 0011223345788999999999999999999
Q ss_pred CCCCCCCCC
Q 005224 683 KHPYVSSDV 691 (707)
Q Consensus 683 ~Hp~f~~~~ 691 (707)
+||||....
T Consensus 271 ~hp~~~~~~ 279 (326)
T 2y0a_A 271 QHPWIKPKD 279 (326)
T ss_dssp HSTTTSCCS
T ss_pred cCCCccCCc
Confidence 999998654
No 50
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=1.2e-42 Score=365.58 Aligned_cols=283 Identities=25% Similarity=0.357 Sum_probs=207.9
Q ss_pred HHhcCCCccceEeeeCceEEEEEEe-CCCcEEEEEEeccCCh-----hhHHHHHHHHHHHHcc---CCCcceeEEEEEEe
Q 005224 372 LATNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSL-----QGEKEFLTEIQFLSRL---HHRNLVSLVGYCDE 442 (707)
Q Consensus 372 ~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~~-----~~~~~~~~E~~~l~~l---~H~nIv~l~~~~~~ 442 (707)
...++|++.+.||+|+||+||+|.. .+++.||||++..... .....+.+|+++++.+ +||||+++++++..
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~ 85 (308)
T 3g33_A 6 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCAT 85 (308)
T ss_dssp ----CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEE
T ss_pred ccccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeec
Confidence 3467999999999999999999996 4789999999864221 1134667788777776 49999999999977
Q ss_pred CC-----eEEEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEE
Q 005224 443 EG-----EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKV 517 (707)
Q Consensus 443 ~~-----~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl 517 (707)
.. ..++||||++ ++|.+++.......+++..++.++.|++.||+|||+.+ |+||||||+|||++.++.+||
T Consensus 86 ~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~Nil~~~~~~~kl 161 (308)
T 3g33_A 86 SRTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKL 161 (308)
T ss_dssp CCSSSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCTTTEEECTTSCEEE
T ss_pred cCCCCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEcCCCCEEE
Confidence 65 5899999996 69999998776667999999999999999999999999 999999999999999999999
Q ss_pred eeecccccCCCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHh
Q 005224 518 ADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAY 597 (707)
Q Consensus 518 ~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~elltG~~pf~~~~~~~~~~~~~~ 597 (707)
+|||+++..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||........ .....
T Consensus 162 ~Dfg~a~~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~-~~~i~ 232 (308)
T 3g33_A 162 ADFGLARIYSYQ--------MALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQ-LGKIF 232 (308)
T ss_dssp CSCSCTTTSTTC--------CCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHH-HHHHH
T ss_pred eeCccccccCCC--------cccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHH
Confidence 999999865432 123456789999999999999999999999999999999999999976543221 11111
Q ss_pred hcccchhhccCCCC---CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCC
Q 005224 598 QSSMMFSVIDGNMG---SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEET 674 (707)
Q Consensus 598 ~~~~~~~~~~~~~~---~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~ 674 (707)
...... ....+. ..+. . ...+....... ...+..++...+||.+||+.||++
T Consensus 233 ~~~~~~--~~~~~~~~~~~~~-----------~--~~~~~~~~~~~----------~~~~~~~~~~~~li~~~L~~dP~~ 287 (308)
T 3g33_A 233 DLIGLP--PEDDWPRDVSLPR-----------G--AFPPRGPRPVQ----------SVVPEMEESGAQLLLEMLTFNPHK 287 (308)
T ss_dssp HHHCCC--CTTTSCSSCSSCG-----------G--GSCCCCCCCHH----------HHSCSCCHHHHHHHHHHTCSSTTT
T ss_pred HHhCCC--Chhhccchhhccc-----------c--ccCCCCCCcHH----------HhCccccHHHHHHHHHHhcCCCcc
Confidence 100000 000000 0000 0 00111111111 122444555668999999999999
Q ss_pred CCCCCcCCCCCCCCCCCC
Q 005224 675 PPSSSSMLKHPYVSSDVS 692 (707)
Q Consensus 675 R~sa~e~L~Hp~f~~~~~ 692 (707)
|||++|+|+||||.....
T Consensus 288 R~t~~e~l~h~~~~~~~~ 305 (308)
T 3g33_A 288 RISAFRALQHSYLHKDEG 305 (308)
T ss_dssp SCCHHHHHTSTTC-----
T ss_pred CCCHHHHhcCccccCCCC
Confidence 999999999999987643
No 51
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=2.5e-43 Score=374.10 Aligned_cols=202 Identities=26% Similarity=0.407 Sum_probs=169.0
Q ss_pred hcCCCccceEeeeCceEEEEEEe----CCCcEEEEEEeccCCh----hhHHHHHHHHHHHHccCCCcceeEEEEEEeCCe
Q 005224 374 TNNFNSSTQIGQGGYGKVYKGIL----PDGTVVAVKRAQEGSL----QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGE 445 (707)
Q Consensus 374 ~~~~~~~~~lG~G~~g~Vy~~~~----~~~~~vavK~l~~~~~----~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~ 445 (707)
.++|++.+.||+|+||.||+|.. .+++.||+|++..... .....+.+|+++++.++||||+++++++...+.
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 95 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK 95 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence 46799999999999999999996 4789999999976432 233567889999999999999999999999999
Q ss_pred EEEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeeccccc
Q 005224 446 QMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRL 525 (707)
Q Consensus 446 ~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~ 525 (707)
.++||||+++++|.+++.... .+++..++.++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++.
T Consensus 96 ~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~al~~lH~~~---ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~ 170 (327)
T 3a62_A 96 LYLILEYLSGGELFMQLEREG--IFMEDTACFYLAEISMALGHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKE 170 (327)
T ss_dssp EEEEEECCTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCTTTEEECTTSCEEECCCSCC--
T ss_pred EEEEEeCCCCCcHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHhCC---EEcccCCHHHeEECCCCcEEEEeCCcccc
Confidence 999999999999999997643 4889999999999999999999999 99999999999999999999999999975
Q ss_pred CCCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCc
Q 005224 526 APVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 587 (707)
Q Consensus 526 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~elltG~~pf~~~~ 587 (707)
.... ........||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 171 ~~~~-------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~ 225 (327)
T 3a62_A 171 SIHD-------GTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGEN 225 (327)
T ss_dssp ---------------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred cccC-------CccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCC
Confidence 4321 112334578999999999999999999999999999999999999997543
No 52
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=1.9e-41 Score=356.07 Aligned_cols=280 Identities=35% Similarity=0.617 Sum_probs=232.5
Q ss_pred CcccccHHHHHHHhcCCCcc------ceEeeeCceEEEEEEeCCCcEEEEEEeccCC----hhhHHHHHHHHHHHHccCC
Q 005224 361 GVRSFTYGEMALATNNFNSS------TQIGQGGYGKVYKGILPDGTVVAVKRAQEGS----LQGEKEFLTEIQFLSRLHH 430 (707)
Q Consensus 361 ~~~~~~~~~l~~~~~~~~~~------~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~----~~~~~~~~~E~~~l~~l~H 430 (707)
....|++.++..++++|... +.||+|+||+||+|.. +++.||||++.... ....+.+.+|+++++.++|
T Consensus 11 ~~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h 89 (307)
T 2nru_A 11 RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQH 89 (307)
T ss_dssp CCEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCC
T ss_pred CCCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCC
Confidence 34678999999999999887 8999999999999997 68899999986532 2335678999999999999
Q ss_pred CcceeEEEEEEeCCeEEEEEecCCCCCHHHHHhhc-CCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEE
Q 005224 431 RNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAK-SKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILL 509 (707)
Q Consensus 431 ~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl 509 (707)
|||+++++++.+.+..++||||+++++|.+++... ...++++..++.++.|+++||+|||+.+ |+||||||+||++
T Consensus 90 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dlkp~Nili 166 (307)
T 2nru_A 90 ENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENH---HIHRDIKSANILL 166 (307)
T ss_dssp TTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEE
T ss_pred CCeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCC---eecCCCCHHHEEE
Confidence 99999999999999999999999999999999753 3456999999999999999999999998 9999999999999
Q ss_pred cCCCcEEEeeecccccCCCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCch-
Q 005224 510 DHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKN- 588 (707)
Q Consensus 510 ~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~elltG~~pf~~~~~- 588 (707)
++++.+||+|||+++....... ........||+.|+|||++.+ .++.++|||||||++|||++|+.||.....
T Consensus 167 ~~~~~~kl~Dfg~~~~~~~~~~-----~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~ 240 (307)
T 2nru_A 167 DEAFTAKISDFGLARASEKFAQ-----TVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREP 240 (307)
T ss_dssp CTTCCEEECCCTTCEECCSCSS-----CEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSS
T ss_pred cCCCcEEEeecccccccccccc-----cccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcch
Confidence 9999999999999986543221 112334568999999998875 578999999999999999999999975432
Q ss_pred --hHHHHHHHh-hcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhh
Q 005224 589 --IVREVNIAY-QSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIW 650 (707)
Q Consensus 589 --~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~ 650 (707)
......... ....+...+++.....+..++..+.+++..||+.+|.+||++.++++.|+++.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~ 305 (307)
T 2nru_A 241 QLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMT 305 (307)
T ss_dssp SBTTHHHHHHHTTSCCHHHHSCSSCSCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC
T ss_pred HHHHHHHHHhhhhhhhhhhhccccccccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHh
Confidence 111111111 12223445556666678889999999999999999999999999999999864
No 53
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=9e-43 Score=366.73 Aligned_cols=267 Identities=32% Similarity=0.502 Sum_probs=211.6
Q ss_pred HHHHHHhcCCCccceEeeeCceEEEEEEeCCCcEEEEEEeccCCh--hhHHHHHHHHHHHHccCCCcceeEEEEEEeCCe
Q 005224 368 GEMALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGE 445 (707)
Q Consensus 368 ~~l~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~ 445 (707)
+++....++|++.+.||+|+||+||+|.. +|+.||||++..... ...+.+.+|++++++++||||+++++++...+.
T Consensus 30 ~~~~i~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 108 (309)
T 3p86_A 30 DDMDIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPN 108 (309)
T ss_dssp --CBCCGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTC
T ss_pred ccccCChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCc
Confidence 34445567899999999999999999987 688999999876442 334678999999999999999999999999999
Q ss_pred EEEEEecCCCCCHHHHHhhcCC-CCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccc
Q 005224 446 QMLVYEFMSNGTLRDQLSAKSK-EPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSR 524 (707)
Q Consensus 446 ~~lV~E~~~~gsL~~~l~~~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~ 524 (707)
.++||||+++|+|.+++..... ..+++..++.++.|+++||+|||+.+ ++|+||||||+|||++.++.+||+|||+++
T Consensus 109 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~ 187 (309)
T 3p86_A 109 LSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRN-PPIVHRNLKSPNLLVDKKYTVKVCDFGLSR 187 (309)
T ss_dssp CEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSS-SCCCCTTCCGGGEEECTTCCEEECCCC---
T ss_pred eEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCC-CCEECCCCChhhEEEeCCCcEEECCCCCCc
Confidence 9999999999999999976432 24899999999999999999999875 459999999999999999999999999997
Q ss_pred cCCCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchh
Q 005224 525 LAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFS 604 (707)
Q Consensus 525 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~ 604 (707)
...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||.............
T Consensus 188 ~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~~~~~~-------- 252 (309)
T 3p86_A 188 LKASTF-------LSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVG-------- 252 (309)
T ss_dssp ---------------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHH--------
T ss_pred cccccc-------cccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH--------
Confidence 543221 12234578999999999999999999999999999999999999997654322111110
Q ss_pred hccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhc
Q 005224 605 VIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNM 652 (707)
Q Consensus 605 ~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~ 652 (707)
........+..++..+.+++.+||+.+|.+||++.++++.|+.+...
T Consensus 253 -~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~ 299 (309)
T 3p86_A 253 -FKCKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKS 299 (309)
T ss_dssp -HSCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC-
T ss_pred -hcCCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 11223345666778899999999999999999999999999988654
No 54
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=5.1e-43 Score=374.90 Aligned_cols=202 Identities=22% Similarity=0.356 Sum_probs=177.5
Q ss_pred HhcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCCh---hhHHHHHHHHHHHHcc-CCCcceeEEEEEEeCCeEE
Q 005224 373 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQM 447 (707)
Q Consensus 373 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~ 447 (707)
..++|+..+.||+|+||+||+|..+ +++.||||++..... ...+.+..|..+++.+ +||||+++++++.+.+..+
T Consensus 18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~ 97 (353)
T 2i0e_A 18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 97 (353)
T ss_dssp -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEE
T ss_pred chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEE
Confidence 4568999999999999999999976 588999999875321 2345688999999988 8999999999999999999
Q ss_pred EEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCC
Q 005224 448 LVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAP 527 (707)
Q Consensus 448 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~ 527 (707)
+||||+++|+|.+++.... .+++..++.++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 98 lv~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~ 172 (353)
T 2i0e_A 98 FVMEYVNGGDLMYHIQQVG--RFKEPHAVFYAAEIAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENI 172 (353)
T ss_dssp EEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCCC
T ss_pred EEEeCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---EEeccCCHHHEEEcCCCcEEEEeCCcccccc
Confidence 9999999999999997643 4899999999999999999999999 9999999999999999999999999998543
Q ss_pred CCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCC
Q 005224 528 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 586 (707)
Q Consensus 528 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~elltG~~pf~~~ 586 (707)
.. ........||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 173 ~~-------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~ 224 (353)
T 2i0e_A 173 WD-------GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGE 224 (353)
T ss_dssp CT-------TCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred cC-------CcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCC
Confidence 21 12234567999999999999999999999999999999999999999654
No 55
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=3e-43 Score=395.78 Aligned_cols=263 Identities=24% Similarity=0.349 Sum_probs=211.1
Q ss_pred HhcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCCh---hhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEE
Q 005224 373 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 448 (707)
Q Consensus 373 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~l 448 (707)
..++|+..+.||+|+||.||+|..+ +|+.||||++..... .....+.+|+++|+.++||||+++++++.+.+..++
T Consensus 182 ~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~l 261 (576)
T 2acx_A 182 TKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCL 261 (576)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred cccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEE
Confidence 3567999999999999999999975 799999999865321 234568899999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCC
Q 005224 449 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 528 (707)
Q Consensus 449 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~ 528 (707)
||||+++|+|.+++.......+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++....
T Consensus 262 VmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~g---IvHrDLKPeNILld~~g~vKL~DFGla~~~~~ 338 (576)
T 2acx_A 262 VLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRER---IVYRDLKPENILLDDHGHIRISDLGLAVHVPE 338 (576)
T ss_dssp EECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC---EeccCCchheEEEeCCCCeEEEecccceeccc
Confidence 999999999999998766667999999999999999999999999 99999999999999999999999999987643
Q ss_pred CCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccC
Q 005224 529 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDG 608 (707)
Q Consensus 529 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 608 (707)
.. ......||+.|+|||++.+..++.++|||||||++|||++|+.||.......
T Consensus 339 ~~--------~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~------------------ 392 (576)
T 2acx_A 339 GQ--------TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKI------------------ 392 (576)
T ss_dssp TC--------CEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCC------------------
T ss_pred Cc--------cccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccch------------------
Confidence 21 2234579999999999999999999999999999999999999996532200
Q ss_pred CCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCC-----CCCcCCC
Q 005224 609 NMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPP-----SSSSMLK 683 (707)
Q Consensus 609 ~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~-----sa~e~L~ 683 (707)
. ...+.+.+... +..-| ...++.+.+||.+||+.||++|+ +++|+++
T Consensus 393 -----~---~~~i~~~i~~~----~~~~p----------------~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~ 444 (576)
T 2acx_A 393 -----K---REEVERLVKEV----PEEYS----------------ERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKE 444 (576)
T ss_dssp -----C---HHHHHHHHHHC----CCCCC----------------TTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHT
T ss_pred -----h---HHHHHHHhhcc----cccCC----------------ccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHh
Confidence 0 00111111110 00000 11223345678888888888888 6788999
Q ss_pred CCCCCCCCC
Q 005224 684 HPYVSSDVS 692 (707)
Q Consensus 684 Hp~f~~~~~ 692 (707)
||||.+..+
T Consensus 445 HpfF~~i~w 453 (576)
T 2acx_A 445 HPLFKKLNF 453 (576)
T ss_dssp SGGGTTCCH
T ss_pred ChhhccCCH
Confidence 999987543
No 56
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=3.5e-43 Score=379.73 Aligned_cols=199 Identities=27% Similarity=0.390 Sum_probs=176.0
Q ss_pred hcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCC---hhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEE
Q 005224 374 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 449 (707)
Q Consensus 374 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV 449 (707)
.++|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+++++.++||||+++++++.+.+..++|
T Consensus 14 ~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv 93 (384)
T 4fr4_A 14 FDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMV 93 (384)
T ss_dssp GGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 367889999999999999999975 68999999986532 12346788999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCC
Q 005224 450 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 529 (707)
Q Consensus 450 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~ 529 (707)
|||+++|+|.+++... ..+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 94 ~e~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~ 168 (384)
T 4fr4_A 94 VDLLLGGDLRYHLQQN--VHFKEETVKLFICELVMALDYLQNQR---IIHRDMKPDNILLDEHGHVHITDFNIAAMLPRE 168 (384)
T ss_dssp ECCCTTEEHHHHHHTT--CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred EecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCcHHHeEECCCCCEEEeccceeeeccCC
Confidence 9999999999999653 45999999999999999999999999 999999999999999999999999999876432
Q ss_pred CCCCccccceecccccCCCccchhhhcc---CCCCCchhhHHHHHHHHHHHcCCCCCCC
Q 005224 530 DIEGIVPAHVSTVVKGTPGYLDPEYFLT---HKLTDKSDVYSLGVVFLELLTGMQPISH 585 (707)
Q Consensus 530 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~s~~sDVwS~Gvll~elltG~~pf~~ 585 (707)
.......||+.|+|||++.+ ..++.++|||||||++|||++|+.||..
T Consensus 169 --------~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~ 219 (384)
T 4fr4_A 169 --------TQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHI 219 (384)
T ss_dssp --------CCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCC
T ss_pred --------CceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCC
Confidence 22345679999999999974 4589999999999999999999999964
No 57
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=6.4e-43 Score=376.02 Aligned_cols=257 Identities=25% Similarity=0.387 Sum_probs=207.2
Q ss_pred hcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCCh--hhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEE
Q 005224 374 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 450 (707)
Q Consensus 374 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~ 450 (707)
.++|++.+.||+|+||.||+|..+ +|+.||+|++..... ...+.+.+|+++++.++||||+++++++.+.+..++||
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~ 107 (362)
T 2bdw_A 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 107 (362)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 467999999999999999999975 689999999975432 33467889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCC---CcEEEeeecccccCC
Q 005224 451 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHK---FTAKVADFGLSRLAP 527 (707)
Q Consensus 451 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~---~~~kl~DFGla~~~~ 527 (707)
||+++|+|.+++... ..+++..++.++.||+.||+|||+.+ |+||||||+|||++.+ +.+||+|||++....
T Consensus 108 e~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~ 182 (362)
T 2bdw_A 108 DLVTGGELFEDIVAR--EFYSEADASHCIQQILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN 182 (362)
T ss_dssp CCCCSCBHHHHHTTC--SCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCT
T ss_pred ecCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCchHHEEEecCCCCCCEEEeecCcceEec
Confidence 999999999999653 45899999999999999999999999 9999999999999865 459999999998664
Q ss_pred CCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhcc
Q 005224 528 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVID 607 (707)
Q Consensus 528 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 607 (707)
... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...... ..
T Consensus 183 ~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~-~~--------------- 238 (362)
T 2bdw_A 183 DSE--------AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH-RL--------------- 238 (362)
T ss_dssp TCC--------SCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HH---------------
T ss_pred CCc--------ccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH-HH---------------
Confidence 321 223457999999999999999999999999999999999999999654321 10
Q ss_pred CCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCCCCCCC
Q 005224 608 GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYV 687 (707)
Q Consensus 608 ~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f 687 (707)
.+.+.......|. +. ....++.+.+||.+||..||++|||++|+|+||||
T Consensus 239 --------------~~~i~~~~~~~~~--~~--------------~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~ 288 (362)
T 2bdw_A 239 --------------YAQIKAGAYDYPS--PE--------------WDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWI 288 (362)
T ss_dssp --------------HHHHHHTCCCCCT--TG--------------GGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTSHHH
T ss_pred --------------HHHHHhCCCCCCc--cc--------------ccCCCHHHHHHHHHHcCCChhhCcCHHHHhcCccc
Confidence 0001110000000 00 01112234478899999999999999999999999
Q ss_pred CC
Q 005224 688 SS 689 (707)
Q Consensus 688 ~~ 689 (707)
..
T Consensus 289 ~~ 290 (362)
T 2bdw_A 289 CN 290 (362)
T ss_dssp HT
T ss_pred CC
Confidence 64
No 58
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=3.7e-43 Score=376.50 Aligned_cols=203 Identities=23% Similarity=0.338 Sum_probs=176.6
Q ss_pred hcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCC-----hhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEE
Q 005224 374 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS-----LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQM 447 (707)
Q Consensus 374 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~-----~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~ 447 (707)
.++|++.+.||+|+||+||+|..+ +++.||||++.... ....+.+.+|+++++.++||||+++++++.+.+..+
T Consensus 23 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 102 (351)
T 3c0i_A 23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLY 102 (351)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred ccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 457899999999999999999975 78999999986421 123567999999999999999999999999999999
Q ss_pred EEEecCCCCCHHHHHhhc--CCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCc---EEEeeecc
Q 005224 448 LVYEFMSNGTLRDQLSAK--SKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFT---AKVADFGL 522 (707)
Q Consensus 448 lV~E~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~---~kl~DFGl 522 (707)
+||||+++++|.+++... ....+++..++.++.||++||+|||+++ |+||||||+|||++.++. +||+|||+
T Consensus 103 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~---ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~ 179 (351)
T 3c0i_A 103 MVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNN---IIHRDVKPHCVLLASKENSAPVKLGGFGV 179 (351)
T ss_dssp EEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECSSSTTCCEEECCCTT
T ss_pred EEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCChHHeEEecCCCCCcEEEecCcc
Confidence 999999999999888653 3345899999999999999999999999 999999999999986654 99999999
Q ss_pred cccCCCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCC
Q 005224 523 SRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 586 (707)
Q Consensus 523 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~elltG~~pf~~~ 586 (707)
++...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 180 a~~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~ 236 (351)
T 3c0i_A 180 AIQLGESG-------LVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGT 236 (351)
T ss_dssp CEECCTTS-------CBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSS
T ss_pred eeEecCCC-------eeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCc
Confidence 98764322 1223457999999999999999999999999999999999999999753
No 59
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=1.3e-42 Score=357.47 Aligned_cols=259 Identities=27% Similarity=0.445 Sum_probs=217.2
Q ss_pred HHhcCCCccceEeeeCceEEEEEEeCCCcEEEEEEeccCChhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEe
Q 005224 372 LATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 451 (707)
Q Consensus 372 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E 451 (707)
...++|++.+.||+|+||+||+|..+++..||||++.... ...+++.+|++++++++||||+++++++...+..++|||
T Consensus 5 l~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 83 (268)
T 3sxs_A 5 LKREEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGS-MSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTE 83 (268)
T ss_dssp CCGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTT-BCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred echhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCC-CcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEE
Confidence 3457889999999999999999999888899999997643 335679999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCC
Q 005224 452 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 531 (707)
Q Consensus 452 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 531 (707)
|+++++|.+++.... ..+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 84 ~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~- 158 (268)
T 3sxs_A 84 YISNGCLLNYLRSHG-KGLEPSQLLEMCYDVCEGMAFLESHQ---FIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQ- 158 (268)
T ss_dssp CCTTCBHHHHHHHHG-GGCCHHHHHHHHHHHHHHHHHHHHTT---EEESSCSGGGEEECTTCCEEECCTTCEEECCTTC-
T ss_pred ccCCCcHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCcCcceEEECCCCCEEEccCccceecchhh-
Confidence 999999999997643 35899999999999999999999999 9999999999999999999999999998764332
Q ss_pred CCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHhhcccchhhccCCC
Q 005224 532 EGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 610 (707)
Q Consensus 532 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 610 (707)
........+|+.|+|||++.+..++.++||||||+++|||++ |+.||........... +..+..
T Consensus 159 -----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~----------~~~~~~ 223 (268)
T 3sxs_A 159 -----YVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLK----------VSQGHR 223 (268)
T ss_dssp -----EEECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHH----------HHTTCC
T ss_pred -----hhcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHHHHH----------HHcCCC
Confidence 112233456778999999999999999999999999999999 9999975544222111 111222
Q ss_pred CCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 005224 611 GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 651 (707)
Q Consensus 611 ~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~ 651 (707)
...+..++..+.+++..||+.+|.+||++.++++.|+.+.+
T Consensus 224 ~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~ 264 (268)
T 3sxs_A 224 LYRPHLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLRE 264 (268)
T ss_dssp CCCCTTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC
T ss_pred CCCCCcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhh
Confidence 23344556789999999999999999999999999987754
No 60
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=2e-42 Score=356.32 Aligned_cols=258 Identities=29% Similarity=0.484 Sum_probs=216.6
Q ss_pred HhcCCCccceEeeeCceEEEEEEeCCCcEEEEEEeccCChhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEec
Q 005224 373 ATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 452 (707)
Q Consensus 373 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E~ 452 (707)
..++|+..+.||+|+||+||+|...+++.||+|++.... ...+++.+|++++++++||||+++++++.+.+..++||||
T Consensus 8 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 86 (269)
T 4hcu_A 8 DPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEF 86 (269)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred ChhhceeeheecCCCccEEEEEEecCCCeEEEEEecccc-cCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEe
Confidence 346788999999999999999999889999999998643 3346799999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCC
Q 005224 453 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 532 (707)
Q Consensus 453 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 532 (707)
+++++|.+++... ...+++..++.++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 87 ~~~~~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~-- 160 (269)
T 4hcu_A 87 MEHGCLSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ-- 160 (269)
T ss_dssp CTTCBHHHHHHTT-TTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHH--
T ss_pred CCCCcHHHHHHhc-CcccCHHHHHHHHHHHHHHHHHHHhCC---eecCCcchheEEEcCCCCEEeccccccccccccc--
Confidence 9999999999654 345899999999999999999999999 9999999999999999999999999998654321
Q ss_pred CccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHhhcccchhhccCCCC
Q 005224 533 GIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 611 (707)
Q Consensus 533 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 611 (707)
........+|+.|+|||++.+..++.++|||||||++|||++ |+.||...... +.... +......
T Consensus 161 ----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~-~~~~~---------~~~~~~~ 226 (269)
T 4hcu_A 161 ----YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS-EVVED---------ISTGFRL 226 (269)
T ss_dssp ----HHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-HHHHH---------HHTTCCC
T ss_pred ----cccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHH-HHHHH---------HhcCccC
Confidence 112233456778999999999999999999999999999999 99999754432 11111 1112223
Q ss_pred CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 005224 612 SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 651 (707)
Q Consensus 612 ~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~ 651 (707)
..+...+..+.+++..|++.+|.+||++.++++.|+++.+
T Consensus 227 ~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~ 266 (269)
T 4hcu_A 227 YKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE 266 (269)
T ss_dssp CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCCcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHH
Confidence 3445556789999999999999999999999999998765
No 61
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=1.5e-42 Score=382.17 Aligned_cols=259 Identities=23% Similarity=0.347 Sum_probs=207.4
Q ss_pred HhcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCCh--hhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEE
Q 005224 373 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 449 (707)
Q Consensus 373 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV 449 (707)
..++|++.+.||+|+||+||+|... +|+.||+|++..... ...+.+.+|+++++.++||||+++++++.+.+..++|
T Consensus 9 ~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv 88 (444)
T 3soa_A 9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLI 88 (444)
T ss_dssp HHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEE
T ss_pred ccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEE
Confidence 3567999999999999999999964 799999999876443 2346789999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEc---CCCcEEEeeecccccC
Q 005224 450 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLD---HKFTAKVADFGLSRLA 526 (707)
Q Consensus 450 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~---~~~~~kl~DFGla~~~ 526 (707)
|||+++|+|.+.+... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++ +++.+||+|||+++..
T Consensus 89 ~E~~~gg~L~~~i~~~--~~~~e~~~~~i~~qil~aL~~lH~~g---ivHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~ 163 (444)
T 3soa_A 89 FDLVTGGELFEDIVAR--EYYSEADASHCIQQILEAVLHCHQMG---VVHRNLKPENLLLASKLKGAAVKLADFGLAIEV 163 (444)
T ss_dssp ECCCBCCBHHHHHHHC--SCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSSTTEEESBSSTTCCEEECCCSSCBCC
T ss_pred EEeCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEeccCCCCcEEEccCceeEEe
Confidence 9999999999999764 35999999999999999999999999 99999999999998 5688999999999866
Q ss_pred CCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhc
Q 005224 527 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVI 606 (707)
Q Consensus 527 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~ 606 (707)
.... .......||+.|+|||++.+..++.++||||+||++|||++|+.||....... ...
T Consensus 164 ~~~~-------~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~-~~~------------ 223 (444)
T 3soa_A 164 EGEQ-------QAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHR-LYQ------------ 223 (444)
T ss_dssp CTTC-------CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHH------------
T ss_pred cCCC-------ceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHH-HHH------------
Confidence 4322 12234579999999999999999999999999999999999999996543211 000
Q ss_pred cCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCCCCCC
Q 005224 607 DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPY 686 (707)
Q Consensus 607 ~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hp~ 686 (707)
.+........+.. .+..++.+.+||.+||+.||++|||++|+|+|||
T Consensus 224 ----------------~i~~~~~~~~~~~-----------------~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~hp~ 270 (444)
T 3soa_A 224 ----------------QIKAGAYDFPSPE-----------------WDTVTPEAKDLINKMLTINPSKRITAAEALKHPW 270 (444)
T ss_dssp ----------------HHHHTCCCCCTTT-----------------TTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSCT
T ss_pred ----------------HHHhCCCCCCccc-----------------cccCCHHHHHHHHHHcCCChhHCCCHHHHhcCcc
Confidence 1111111100000 0112233457889999999999999999999999
Q ss_pred CCC
Q 005224 687 VSS 689 (707)
Q Consensus 687 f~~ 689 (707)
|..
T Consensus 271 ~~~ 273 (444)
T 3soa_A 271 ISH 273 (444)
T ss_dssp THH
T ss_pred ccC
Confidence 964
No 62
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=2.7e-43 Score=390.05 Aligned_cols=257 Identities=22% Similarity=0.280 Sum_probs=198.2
Q ss_pred hcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccC---ChhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEE
Q 005224 374 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEG---SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 449 (707)
Q Consensus 374 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV 449 (707)
.++|++.+.||+|+||.||+|... +|+.||||++... .......+.+|+++++.++||||+++++++...+..++|
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 226 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV 226 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence 467999999999999999999965 7899999998753 222335678899999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHh-CCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCC
Q 005224 450 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHT-EADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 528 (707)
Q Consensus 450 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~ 528 (707)
|||+++|+|.+++.... .+++..++.++.||+.||+|||+ .+ |+||||||+|||++.++.+||+|||+++....
T Consensus 227 ~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~g---iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 301 (446)
T 4ejn_A 227 MEYANGGELFFHLSRER--VFSEDRARFYGAEIVSALDYLHSEKN---VVYRDLKLENLMLDKDGHIKITDFGLCKEGIK 301 (446)
T ss_dssp ECCCSSCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHHTC---CCCCCCCGGGEEECSSSCEEECCCCCCCTTCC
T ss_pred EeeCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHhhcCC---EEECCCCHHHEEECCCCCEEEccCCCceeccC
Confidence 99999999999997643 58999999999999999999998 88 99999999999999999999999999975432
Q ss_pred CCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccC
Q 005224 529 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDG 608 (707)
Q Consensus 529 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 608 (707)
. ........||+.|+|||++.+..++.++|||||||++|||++|+.||...... ...
T Consensus 302 ~-------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~-~~~--------------- 358 (446)
T 4ejn_A 302 D-------GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE-KLF--------------- 358 (446)
T ss_dssp ------------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHH---------------
T ss_pred C-------CcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHH-HHH---------------
Confidence 2 12234567999999999999999999999999999999999999999654321 111
Q ss_pred CCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCC-----CCCcCCC
Q 005224 609 NMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPP-----SSSSMLK 683 (707)
Q Consensus 609 ~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~-----sa~e~L~ 683 (707)
+.+...-..-| ...++.+.+||.+||..||++|+ |++|+|+
T Consensus 359 --------------~~i~~~~~~~p--------------------~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~ 404 (446)
T 4ejn_A 359 --------------ELILMEEIRFP--------------------RTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ 404 (446)
T ss_dssp --------------HHHHHCCCCCC--------------------TTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred --------------HHHHhCCCCCC--------------------ccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence 11100000000 01122334678888888888888 8999999
Q ss_pred CCCCCCCCC
Q 005224 684 HPYVSSDVS 692 (707)
Q Consensus 684 Hp~f~~~~~ 692 (707)
||||.+..+
T Consensus 405 hp~f~~~~~ 413 (446)
T 4ejn_A 405 HRFFAGIVW 413 (446)
T ss_dssp SGGGTTCCH
T ss_pred CccccCCCH
Confidence 999987654
No 63
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=2.5e-43 Score=373.41 Aligned_cols=204 Identities=27% Similarity=0.409 Sum_probs=174.8
Q ss_pred hcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCCh-hhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEe
Q 005224 374 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 451 (707)
Q Consensus 374 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E 451 (707)
.++|++.+.||+|+||+||+|... +++.||||++..... ...+.+.+|+.+++.++||||+++++++.+.+..++|||
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e 85 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEE
Confidence 368999999999999999999976 789999999865433 224578899999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCC
Q 005224 452 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 531 (707)
Q Consensus 452 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 531 (707)
|+++|+|.+++... ..+++..++.++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.......
T Consensus 86 ~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~LH~~g---ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 160 (323)
T 3tki_A 86 YCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR 160 (323)
T ss_dssp CCTTEEGGGGSBTT--TBCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTCEECEETTE
T ss_pred cCCCCcHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccccchHHEEEeCCCCEEEEEeeccceeccCCc
Confidence 99999999998543 45999999999999999999999999 99999999999999999999999999986532211
Q ss_pred CCccccceecccccCCCccchhhhccCCC-CCchhhHHHHHHHHHHHcCCCCCCCCc
Q 005224 532 EGIVPAHVSTVVKGTPGYLDPEYFLTHKL-TDKSDVYSLGVVFLELLTGMQPISHGK 587 (707)
Q Consensus 532 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-s~~sDVwS~Gvll~elltG~~pf~~~~ 587 (707)
........||+.|+|||++.+..+ +.++|||||||++|||++|+.||....
T Consensus 161 -----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~ 212 (323)
T 3tki_A 161 -----ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPS 212 (323)
T ss_dssp -----ECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSC
T ss_pred -----ccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCc
Confidence 122334678999999999988765 778999999999999999999997543
No 64
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=4.8e-43 Score=372.54 Aligned_cols=254 Identities=22% Similarity=0.329 Sum_probs=204.0
Q ss_pred cCCCccceEeeeCceEEEEEEe-CCCcEEEEEEeccCCh---hhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEE
Q 005224 375 NNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 450 (707)
Q Consensus 375 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~ 450 (707)
++|.+.+.||+|+||+||+|.. .+++.||||++..... ...+.+.+|+++++.++||||+++++++...+..++||
T Consensus 9 ~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 88 (336)
T 3h4j_B 9 GPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVI 88 (336)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 5799999999999999999996 5789999999864321 12357889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCC
Q 005224 451 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 530 (707)
Q Consensus 451 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~ 530 (707)
||+ +|+|.+++.... .+++..++.++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||++......
T Consensus 89 E~~-~g~l~~~l~~~~--~l~~~~~~~i~~qi~~aL~~LH~~g---ivH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~- 161 (336)
T 3h4j_B 89 EYA-GGELFDYIVEKK--RMTEDEGRRFFQQIICAIEYCHRHK---IVHRDLKPENLLLDDNLNVKIADFGLSNIMTDG- 161 (336)
T ss_dssp CCC-CEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCSTTTEEECTTCCEEECCSSCTBTTTTS-
T ss_pred ECC-CCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCchhhEEEcCCCCEEEEEeccceeccCC-
Confidence 999 789999987643 4899999999999999999999999 999999999999999999999999999865432
Q ss_pred CCCccccceecccccCCCccchhhhccCCC-CCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCC
Q 005224 531 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKL-TDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGN 609 (707)
Q Consensus 531 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-s~~sDVwS~Gvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 609 (707)
.......||+.|+|||++.+..+ +.++|||||||++|||++|+.||...... .....+...
T Consensus 162 -------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~-----------~~~~~i~~~ 223 (336)
T 3h4j_B 162 -------NFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIP-----------NLFKKVNSC 223 (336)
T ss_dssp -------BTTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSST-----------TCBCCCCSS
T ss_pred -------cccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHH-----------HHHHHHHcC
Confidence 12234569999999999998776 67999999999999999999999643210 001001000
Q ss_pred CCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCCCCCCCCC
Q 005224 610 MGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSS 689 (707)
Q Consensus 610 ~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f~~ 689 (707)
....|.. .++...+||.+||..||++|||++|+++||||..
T Consensus 224 ~~~~p~~---------------------------------------~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~~~~ 264 (336)
T 3h4j_B 224 VYVMPDF---------------------------------------LSPGAQSLIRRMIVADPMQRITIQEIRRDPWFNV 264 (336)
T ss_dssp CCCCCTT---------------------------------------SCHHHHHHHHTTSCSSGGGSCCHHHHTTCHHHHT
T ss_pred CCCCccc---------------------------------------CCHHHHHHHHHHcCCChhHCcCHHHHHhChhhcc
Confidence 0111111 1222346888899999999999999999999976
Q ss_pred CCC
Q 005224 690 DVS 692 (707)
Q Consensus 690 ~~~ 692 (707)
...
T Consensus 265 ~~~ 267 (336)
T 3h4j_B 265 NLP 267 (336)
T ss_dssp TCC
T ss_pred CCc
Confidence 543
No 65
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=4.9e-43 Score=388.73 Aligned_cols=265 Identities=24% Similarity=0.439 Sum_probs=220.8
Q ss_pred HHHHHHHhcCCCccceEeeeCceEEEEEEeCCCcEEEEEEeccCChhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeE
Q 005224 367 YGEMALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQ 446 (707)
Q Consensus 367 ~~~l~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~ 446 (707)
.++++...++|+..+.||+|+||+||+|.++++..||||+++... ...+.+.+|+++|++++||||+++++++. .+..
T Consensus 180 ~~~~~i~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~ 257 (454)
T 1qcf_A 180 KDAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPI 257 (454)
T ss_dssp TTCSBCCGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSC
T ss_pred ccceeechHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCcc
Confidence 344566678899999999999999999999888999999998644 34678999999999999999999999986 5678
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccC
Q 005224 447 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 526 (707)
Q Consensus 447 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~ 526 (707)
++||||+++|+|.++++......+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++..
T Consensus 258 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DFG~a~~~ 334 (454)
T 1qcf_A 258 YIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLARVI 334 (454)
T ss_dssp EEEECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCSGGGEEECTTCCEEECSTTGGGGB
T ss_pred EEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCCHHHEEECCCCcEEEeeCCCceEc
Confidence 99999999999999997654446889999999999999999999998 999999999999999999999999999875
Q ss_pred CCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHhhcccchhh
Q 005224 527 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSV 605 (707)
Q Consensus 527 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~ 605 (707)
.... ........++..|+|||++....++.++|||||||++|||++ |+.||...... +... .+
T Consensus 335 ~~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~-~~~~---------~i 398 (454)
T 1qcf_A 335 EDNE------YTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP-EVIR---------AL 398 (454)
T ss_dssp CCHH------HHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH-HHHH---------HH
T ss_pred CCCc------eeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHH-HHHH---------HH
Confidence 4211 111123346788999999999999999999999999999999 99999754432 1111 11
Q ss_pred ccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhc
Q 005224 606 IDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNM 652 (707)
Q Consensus 606 ~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~ 652 (707)
..+.....+..++..+.+++.+||+.+|++||++.++++.|+.+...
T Consensus 399 ~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~~ 445 (454)
T 1qcf_A 399 ERGYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTA 445 (454)
T ss_dssp HHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSSS
T ss_pred HcCCCCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHhc
Confidence 12223345667788899999999999999999999999999987553
No 66
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=1.7e-42 Score=371.08 Aligned_cols=261 Identities=25% Similarity=0.366 Sum_probs=196.6
Q ss_pred HhcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEe
Q 005224 373 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 451 (707)
Q Consensus 373 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E 451 (707)
..++|++.+.||+|+||+||+|... +++.||||++.... ..+.+.+|++++++++||||+++++++...+..++|||
T Consensus 51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 128 (349)
T 2w4o_A 51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLE 128 (349)
T ss_dssp GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEE
Confidence 3467999999999999999999976 68899999997643 34578899999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcC---CCcEEEeeecccccCCC
Q 005224 452 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDH---KFTAKVADFGLSRLAPV 528 (707)
Q Consensus 452 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~---~~~~kl~DFGla~~~~~ 528 (707)
|+++|+|.+++... ..+++..++.++.|++.||+|||+.+ |+||||||+|||++. ++.+||+|||+++....
T Consensus 129 ~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~ 203 (349)
T 2w4o_A 129 LVTGGELFDRIVEK--GYYSERDAADAVKQILEAVAYLHENG---IVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEH 203 (349)
T ss_dssp CCCSCBHHHHHTTC--SSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEESSSSTTCCEEECCCC-------
T ss_pred eCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCcccEEEecCCCCCCEEEccCccccccCc
Confidence 99999999999653 45899999999999999999999998 999999999999975 89999999999986542
Q ss_pred CCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccC
Q 005224 529 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDG 608 (707)
Q Consensus 529 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 608 (707)
. .......||+.|+|||++.+..++.++|||||||++|||++|+.||...........
T Consensus 204 ~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~-------------- 261 (349)
T 2w4o_A 204 Q--------VLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFR-------------- 261 (349)
T ss_dssp -----------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHH--------------
T ss_pred c--------cccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHH--------------
Confidence 2 122345689999999999999999999999999999999999999965443211111
Q ss_pred CCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCCCCCCCC
Q 005224 609 NMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVS 688 (707)
Q Consensus 609 ~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f~ 688 (707)
.+..+....+. | ..+..+....+||.+||..||++|||++|+|+||||.
T Consensus 262 ---------------~i~~~~~~~~~--~--------------~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~ 310 (349)
T 2w4o_A 262 ---------------RILNCEYYFIS--P--------------WWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQHPWVT 310 (349)
T ss_dssp ---------------HHHTTCCCCCT--T--------------TTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTTTT
T ss_pred ---------------HHHhCCCccCC--c--------------hhhhCCHHHHHHHHHHccCChhhCcCHHHHhcCcccC
Confidence 11111100000 0 0011223345799999999999999999999999998
Q ss_pred CCCCC
Q 005224 689 SDVSG 693 (707)
Q Consensus 689 ~~~~~ 693 (707)
+....
T Consensus 311 ~~~~~ 315 (349)
T 2w4o_A 311 GKAAN 315 (349)
T ss_dssp STTCC
T ss_pred CCccc
Confidence 87653
No 67
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=2.6e-43 Score=391.17 Aligned_cols=284 Identities=21% Similarity=0.322 Sum_probs=206.5
Q ss_pred hcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccC--ChhhHHHHHHHHHHHHccCCCcceeEEEEEEeC------C
Q 005224 374 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEG--SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE------G 444 (707)
Q Consensus 374 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~------~ 444 (707)
.++|++.+.||+|+||+||+|... +++.||||++... .....+.+.+|+.+++.++||||+++++++... .
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 140 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ 140 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence 468999999999999999999965 7899999999753 333456788999999999999999999999654 4
Q ss_pred eEEEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccc
Q 005224 445 EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSR 524 (707)
Q Consensus 445 ~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~ 524 (707)
..++||||+++ +|.+.+.. .+++..++.++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+|+
T Consensus 141 ~~~lv~E~~~~-~l~~~~~~----~l~~~~~~~~~~qil~aL~~lH~~~---iiHrDlkp~NIll~~~~~~kl~DFG~a~ 212 (464)
T 3ttj_A 141 DVYLVMELMDA-NLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR 212 (464)
T ss_dssp EEEEEEECCSE-EHHHHHTS----CCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCCCC-
T ss_pred eEEEEEeCCCC-CHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChHhEEEeCCCCEEEEEEEeee
Confidence 67999999965 57777732 3899999999999999999999999 9999999999999999999999999998
Q ss_pred cCCCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchh
Q 005224 525 LAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFS 604 (707)
Q Consensus 525 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~ 604 (707)
..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||....... .+......
T Consensus 213 ~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~-~~~~i~~~----- 278 (464)
T 3ttj_A 213 TAGTS--------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID-QWNKVIEQ----- 278 (464)
T ss_dssp ----C--------CCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHH-----
T ss_pred ecCCC--------cccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHh-----
Confidence 65432 22345678999999999999999999999999999999999999997654432 22221110
Q ss_pred hccCCCCCCChHHHHHHHHHHHHhcccCCCCC-CCHHHHHHHHHHhhhcCCCC-------CCCCCccccCCCCCCCCCCC
Q 005224 605 VIDGNMGSYPSECVEKFIKLALKCCQDETDAR-PSMSEVMRELESIWNMMPES-------DTKTPEFINSEHTSKEETPP 676 (707)
Q Consensus 605 ~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~R-Pt~~~v~~~L~~~~~~~~~~-------~~~~~dll~~~L~~dP~~R~ 676 (707)
.+....+....+...........|... ..+...... ..++.. ++.+.|||.+||++||++|+
T Consensus 279 -----lg~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ 348 (464)
T 3ttj_A 279 -----LGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPD-----SLFPADSEHNKLKASQARDLLSKMLVIDPAKRI 348 (464)
T ss_dssp -----HCSCCHHHHTTSCHHHHHHHTTSCCCCCCCHHHHSCG-----GGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSC
T ss_pred -----cCCCCHHHHHHcchhhhhHhhcccccCCCChHHhCcc-----cccccccccccccCHHHHHHHHHHcCCChhhCC
Confidence 011112222222122222222222211 122111000 000000 22356899999999999999
Q ss_pred CCCcCCCCCCCCC
Q 005224 677 SSSSMLKHPYVSS 689 (707)
Q Consensus 677 sa~e~L~Hp~f~~ 689 (707)
|++|+|+||||..
T Consensus 349 ta~e~L~Hp~~~~ 361 (464)
T 3ttj_A 349 SVDDALQHPYINV 361 (464)
T ss_dssp CHHHHHTSTTTGG
T ss_pred CHHHHhcChhhhh
Confidence 9999999999975
No 68
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=6e-42 Score=379.38 Aligned_cols=256 Identities=29% Similarity=0.449 Sum_probs=216.5
Q ss_pred HHHhcCCCccceEeeeCceEEEEEEeCCCcEEEEEEeccCChhhHHHHHHHHHHHHccCCCcceeEEEEEEeCC-eEEEE
Q 005224 371 ALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG-EQMLV 449 (707)
Q Consensus 371 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~-~~~lV 449 (707)
....++|+..+.||+|+||.||+|.++ ++.||||+++... ..+.+.+|+++|++++||||+++++++.... ..++|
T Consensus 189 ~i~~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv 265 (450)
T 1k9a_A 189 ALNMKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIV 265 (450)
T ss_dssp BCCGGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEE
T ss_pred ccChHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEE
Confidence 345678889999999999999999985 7899999998643 4468999999999999999999999987665 79999
Q ss_pred EecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCC
Q 005224 450 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 529 (707)
Q Consensus 450 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~ 529 (707)
|||+++|+|.+++.......+++..++.++.||++||+|||+++ |+||||||+|||+++++.+||+|||+++.....
T Consensus 266 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~ 342 (450)
T 1k9a_A 266 TEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASST 342 (450)
T ss_dssp EECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTSCEEECCCTTCEECC--
T ss_pred EEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCHhhEEECCCCCEEEeeCCCccccccc
Confidence 99999999999998876666899999999999999999999999 999999999999999999999999999854321
Q ss_pred CCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHhhcccchhhccC
Q 005224 530 DIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDG 608 (707)
Q Consensus 530 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 608 (707)
.....++..|+|||++.+..++.++|||||||++|||++ |+.||....... . ...+..+
T Consensus 343 ----------~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~-~---------~~~i~~~ 402 (450)
T 1k9a_A 343 ----------QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD-V---------VPRVEKG 402 (450)
T ss_dssp --------------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTT-H---------HHHHHTT
T ss_pred ----------ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH-H---------HHHHHcC
Confidence 122356889999999999999999999999999999998 999997543211 1 1112223
Q ss_pred CCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhc
Q 005224 609 NMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNM 652 (707)
Q Consensus 609 ~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~ 652 (707)
.....|..++..+.+++..||+.+|.+||++.++++.|+.+...
T Consensus 403 ~~~~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~~ 446 (450)
T 1k9a_A 403 YKMDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRTH 446 (450)
T ss_dssp CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred CCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHh
Confidence 33456677888999999999999999999999999999988653
No 69
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=6.1e-43 Score=377.62 Aligned_cols=254 Identities=25% Similarity=0.367 Sum_probs=202.4
Q ss_pred ccceEeeeCceEEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEecCCCCC
Q 005224 379 SSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGT 457 (707)
Q Consensus 379 ~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E~~~~gs 457 (707)
..+.||+|+||.||+|... +|+.||+|++........+.+.+|++++++++||||+++++++...+..++||||+++++
T Consensus 93 ~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~ 172 (373)
T 2x4f_A 93 KTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGE 172 (373)
T ss_dssp EEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCE
T ss_pred cceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCc
Confidence 3678999999999999964 799999999987666667789999999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEE--cCCCcEEEeeecccccCCCCCCCCcc
Q 005224 458 LRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILL--DHKFTAKVADFGLSRLAPVPDIEGIV 535 (707)
Q Consensus 458 L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl--~~~~~~kl~DFGla~~~~~~~~~~~~ 535 (707)
|.+++... ...+++..++.++.||++||+|||+.+ |+||||||+|||+ ++++.+||+|||+++......
T Consensus 173 L~~~l~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~----- 243 (373)
T 2x4f_A 173 LFDRIIDE-SYNLTELDTILFMKQICEGIRHMHQMY---ILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPRE----- 243 (373)
T ss_dssp EHHHHHHT-GGGCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTC-----
T ss_pred HHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCCHHHEEEecCCCCcEEEEeCCCceecCCcc-----
Confidence 99988653 235899999999999999999999999 9999999999999 567899999999998764322
Q ss_pred ccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCCCCCCCh
Q 005224 536 PAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPS 615 (707)
Q Consensus 536 ~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 615 (707)
......||+.|+|||++.+..++.++|||||||++|||++|+.||.......
T Consensus 244 ---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~------------------------- 295 (373)
T 2x4f_A 244 ---KLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAE------------------------- 295 (373)
T ss_dssp ---BCCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHH-------------------------
T ss_pred ---ccccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHH-------------------------
Confidence 2233468999999999999999999999999999999999999997543311
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCCCCCCCCCC
Q 005224 616 ECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSSD 690 (707)
Q Consensus 616 ~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f~~~ 690 (707)
.+.++....+...+. ..+..++.+.+||.+||..||++|||++|+|+||||...
T Consensus 296 ----~~~~i~~~~~~~~~~-----------------~~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~hp~~~~~ 349 (373)
T 2x4f_A 296 ----TLNNILACRWDLEDE-----------------EFQDISEEAKEFISKLLIKEKSWRISASEALKHPWLSDH 349 (373)
T ss_dssp ----HHHHHHHTCCCSCSG-----------------GGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHCH
T ss_pred ----HHHHHHhccCCCChh-----------------hhccCCHHHHHHHHHHcCCChhhCCCHHHHhcCcCcCCC
Confidence 111111111111111 011223344578999999999999999999999999754
No 70
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=1.8e-42 Score=361.76 Aligned_cols=272 Identities=25% Similarity=0.405 Sum_probs=214.5
Q ss_pred hcCCCccceEeeeCceEEEEEEe-----CCCcEEEEEEeccCChhhHHHHHHHHHHHHccCCCcceeEEEEEEeC--CeE
Q 005224 374 TNNFNSSTQIGQGGYGKVYKGIL-----PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE--GEQ 446 (707)
Q Consensus 374 ~~~~~~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~--~~~ 446 (707)
.++|++.+.||+|+||+||+|.+ .+++.||||++........+.+.+|++++++++||||+++++++... ...
T Consensus 9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 88 (295)
T 3ugc_A 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 88 (295)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSC
T ss_pred HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCce
Confidence 46788999999999999999984 36899999999877666667899999999999999999999998543 568
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccC
Q 005224 447 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 526 (707)
Q Consensus 447 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~ 526 (707)
++||||+++|+|.+++.... ..+++..++.++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 89 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~ 164 (295)
T 3ugc_A 89 KLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVL 164 (295)
T ss_dssp EEEEECCTTCBHHHHHHHCG-GGCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCCCSCC--
T ss_pred EEEEEeCCCCCHHHHHHhcc-cccCHHHHHHHHHHHHHHHHHHhcCC---cccCCCCHhhEEEcCCCeEEEccCcccccc
Confidence 99999999999999997643 35899999999999999999999998 999999999999999999999999999876
Q ss_pred CCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHH------Hhhcc
Q 005224 527 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNI------AYQSS 600 (707)
Q Consensus 527 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~elltG~~pf~~~~~~~~~~~~------~~~~~ 600 (707)
...... ........++..|+|||++.+..++.++|||||||++|||++|..|+............ .....
T Consensus 165 ~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (295)
T 3ugc_A 165 PQDKEF----FKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFH 240 (295)
T ss_dssp ---------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHH
T ss_pred cCCcce----eeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHH
Confidence 432210 11223345677899999999999999999999999999999999988643211100000 00000
Q ss_pred cchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcC
Q 005224 601 MMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMM 653 (707)
Q Consensus 601 ~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~ 653 (707)
....+........+..++..+.+++..||+.+|.+||++.++++.|+.+.+..
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~l 293 (295)
T 3ugc_A 241 LIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 293 (295)
T ss_dssp HHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred HHHHHhccCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhc
Confidence 11112223344456777889999999999999999999999999999987654
No 71
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=1.3e-42 Score=375.92 Aligned_cols=264 Identities=28% Similarity=0.454 Sum_probs=217.7
Q ss_pred HHHHhcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCCh-hhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEE
Q 005224 370 MALATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQM 447 (707)
Q Consensus 370 l~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~ 447 (707)
+....++|...+.||+|+||.||+|.+. +++.||||++..... ...+.+.+|++++++++||||+++++++...+..+
T Consensus 109 ~~~~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 188 (377)
T 3cbl_A 109 WVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIY 188 (377)
T ss_dssp TBCCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCE
T ss_pred cEEchHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcE
Confidence 3445678889999999999999999986 789999999876432 23456889999999999999999999999999999
Q ss_pred EEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCC
Q 005224 448 LVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAP 527 (707)
Q Consensus 448 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~ 527 (707)
+||||+++|+|.+++.... ..+++..++.++.|+++||+|||+.+ |+||||||+|||+++++.+||+|||+++...
T Consensus 189 lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~ 264 (377)
T 3cbl_A 189 IVMELVQGGDFLTFLRTEG-ARLRVKTLLQMVGDAAAGMEYLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSREEA 264 (377)
T ss_dssp EEEECCTTCBHHHHHHHHG-GGCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCGGGCEECT
T ss_pred EEEEcCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCC---cCCcccCHHHEEEcCCCcEEECcCCCceecC
Confidence 9999999999999997643 34899999999999999999999999 9999999999999999999999999998643
Q ss_pred CCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHhhcccchhhc
Q 005224 528 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVI 606 (707)
Q Consensus 528 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~ 606 (707)
.... ........++..|+|||++.+..++.++|||||||++|||++ |..||....... ... .+.
T Consensus 265 ~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~--~~~--------~~~ 329 (377)
T 3cbl_A 265 DGVY-----AASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQ--TRE--------FVE 329 (377)
T ss_dssp TSEE-----ECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHH--HHH--------HHH
T ss_pred CCce-----eecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH--HHH--------HHH
Confidence 2110 011112235778999999999999999999999999999998 999997654321 111 111
Q ss_pred cCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhc
Q 005224 607 DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNM 652 (707)
Q Consensus 607 ~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~ 652 (707)
.+.....+..++..+.+++.+||+.+|++||++.++++.|+.+.+.
T Consensus 330 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~~ 375 (377)
T 3cbl_A 330 KGGRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRKR 375 (377)
T ss_dssp TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred cCCCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHhh
Confidence 2223345666778899999999999999999999999999988653
No 72
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=7.6e-43 Score=369.88 Aligned_cols=285 Identities=22% Similarity=0.390 Sum_probs=206.2
Q ss_pred cCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCChhh-HHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEec
Q 005224 375 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQG-EKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 452 (707)
Q Consensus 375 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~-~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E~ 452 (707)
++|.+.+.||+|+||+||+|... +++.||||++....... ...+.+|+++++.++||||+++++++...+..++||||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 81 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence 57899999999999999999975 78999999987543222 12456799999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCC
Q 005224 453 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 532 (707)
Q Consensus 453 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 532 (707)
++ |+|.+++... ...+++..++.++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 82 ~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~-- 154 (324)
T 3mtl_A 82 LD-KDLKQYLDDC-GNIINMHNVKLFLFQLLRGLAYCHRQK---VLHRDLKPQNLLINERGELKLADFGLARAKSIPT-- 154 (324)
T ss_dssp CS-EEHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHTT---EEESSCCGGGEEECTTCCEEECSSSEEECC------
T ss_pred cc-cCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCcCHHHEEECCCCCEEEccCcccccccCCc--
Confidence 96 5999998764 346899999999999999999999999 9999999999999999999999999998653221
Q ss_pred CccccceecccccCCCccchhhhcc-CCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCCC-
Q 005224 533 GIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNM- 610 (707)
Q Consensus 533 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDVwS~Gvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~- 610 (707)
.......||+.|+|||++.+ ..++.++|||||||++|||++|+.||...... +....... ......
T Consensus 155 -----~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~-~~~~~i~~------~~~~~~~ 222 (324)
T 3mtl_A 155 -----KTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVE-EQLHFIFR------ILGTPTE 222 (324)
T ss_dssp -------------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHH------HHCCCCT
T ss_pred -----cccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHH------HhCCCCh
Confidence 22234568999999999987 67899999999999999999999999754432 11111110 000000
Q ss_pred CCCChHHH-HHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCCCCCCCCC
Q 005224 611 GSYPSECV-EKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSS 689 (707)
Q Consensus 611 ~~~~~~~~-~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f~~ 689 (707)
...+.... ..+.. . ..|..+.. ......+..++...+||.+||..||++|||++|+|+||||.+
T Consensus 223 ~~~~~~~~~~~~~~-----~-~~~~~~~~---------~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~ 287 (324)
T 3mtl_A 223 ETWPGILSNEEFKT-----Y-NYPKYRAE---------ALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLS 287 (324)
T ss_dssp TTSTTGGGCHHHHH-----T-CCCCCCCC---------CHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGG
T ss_pred Hhchhhhcchhhcc-----c-ccccccch---------hhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcChhhhh
Confidence 00000000 00000 0 01111110 011122344455678999999999999999999999999987
Q ss_pred CCCC
Q 005224 690 DVSG 693 (707)
Q Consensus 690 ~~~~ 693 (707)
....
T Consensus 288 ~~~~ 291 (324)
T 3mtl_A 288 LGER 291 (324)
T ss_dssp GCST
T ss_pred cccc
Confidence 6554
No 73
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=9.1e-43 Score=387.28 Aligned_cols=298 Identities=21% Similarity=0.298 Sum_probs=197.8
Q ss_pred hcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccC--ChhhHHHHHHHHHHHHccCCCcceeEEEEEEeC-----Ce
Q 005224 374 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEG--SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE-----GE 445 (707)
Q Consensus 374 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~-----~~ 445 (707)
.++|++.+.||+|+||+||+|... +++.||||++... .....+.+.+|+++|+.++||||+++++++... ..
T Consensus 52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 131 (458)
T 3rp9_A 52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDE 131 (458)
T ss_dssp CTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCce
Confidence 368999999999999999999965 7899999998653 233457889999999999999999999999433 57
Q ss_pred EEEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeeccccc
Q 005224 446 QMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRL 525 (707)
Q Consensus 446 ~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~ 525 (707)
.++||||+ +++|.+++... ..+++..++.++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+|+.
T Consensus 132 ~~lv~e~~-~~~L~~~~~~~--~~l~~~~~~~~~~qi~~aL~~LH~~~---iiHrDlKp~NILl~~~~~~kl~DFGla~~ 205 (458)
T 3rp9_A 132 LYVVLEIA-DSDFKKLFRTP--VYLTELHIKTLLYNLLVGVKYVHSAG---ILHRDLKPANCLVNQDCSVKVCDFGLART 205 (458)
T ss_dssp EEEEECCC-SEEHHHHHHSS--CCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTCCEEECCCTTCBC
T ss_pred EEEEEecc-ccchhhhcccC--CCCCHHHHHHHHHHHHHHHHHHHhCC---cCCCCCChhhEEECCCCCEeecccccchh
Confidence 89999998 57999999653 45999999999999999999999999 99999999999999999999999999987
Q ss_pred CCCCCCCCcc--------------------ccceecccccCCCccchhhh-ccCCCCCchhhHHHHHHHHHHHcC-----
Q 005224 526 APVPDIEGIV--------------------PAHVSTVVKGTPGYLDPEYF-LTHKLTDKSDVYSLGVVFLELLTG----- 579 (707)
Q Consensus 526 ~~~~~~~~~~--------------------~~~~~~~~~gt~~y~aPE~~-~~~~~s~~sDVwS~Gvll~elltG----- 579 (707)
.......... .........||+.|+|||++ .+..++.++|||||||++|||++|
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~~~~ 285 (458)
T 3rp9_A 206 VDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENV 285 (458)
T ss_dssp TTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTSTTTC
T ss_pred ccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhccccc
Confidence 6532211000 01123456789999999987 456799999999999999999994
Q ss_pred ------CCCCCCCchhHHHHHHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHH--------HH
Q 005224 580 ------MQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVM--------RE 645 (707)
Q Consensus 580 ------~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~--------~~ 645 (707)
+.+|............ ................+..+.. .+. .|+..++. ..
T Consensus 286 ~~~~~~~p~f~g~~~~~~~~~~---------~~~~~~~~~~~~~~~~l~~i~~-~~g-----~p~~~~~~~~~~~~~~~~ 350 (458)
T 3rp9_A 286 AYHADRGPLFPGSSCFPLSPDQ---------KAGNDFKFHTRGNRDQLNVIFN-ILG-----TPSEEDIEALEKEDAKRY 350 (458)
T ss_dssp SSGGGCCCSCC-----------------------------CHHHHHHHHHHHH-HHC-----CCCHHHHHTSSCHHHHHH
T ss_pred cccccccccCCCCccccccccc---------cccccccccccCCHHHHHHHHH-HcC-----CCCHHHHhhcCCHHHHHH
Confidence 4444321110000000 0000000001111222222211 111 11211110 01
Q ss_pred HH--------HhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCCCCCCCCCCCC
Q 005224 646 LE--------SIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSSDVS 692 (707)
Q Consensus 646 L~--------~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f~~~~~ 692 (707)
++ .+...++..++.+.|||.+||++||++|+|++|+|+||||.....
T Consensus 351 ~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~t~~e~L~Hp~f~~~~~ 405 (458)
T 3rp9_A 351 IRIFPKREGTDLAERFPASSADAIHLLKRMLVFNPNKRITINECLAHPFFKEVRI 405 (458)
T ss_dssp HTTSCCCCCCCGGGGSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTCC
T ss_pred HHhcCCCCCCCHHHHCCCCCHHHHHHHHHHhccCccccCCHHHHhcCHhhhhcCC
Confidence 10 112233445666779999999999999999999999999987644
No 74
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=3.1e-42 Score=372.27 Aligned_cols=261 Identities=27% Similarity=0.457 Sum_probs=204.4
Q ss_pred hcCCCccceEeeeCceEEEEEEeC----CCcEEEEEEeccCC-hhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEE
Q 005224 374 TNNFNSSTQIGQGGYGKVYKGILP----DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 448 (707)
Q Consensus 374 ~~~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~l 448 (707)
.++|++.+.||+|+||.||+|.+. ++..||||+++... ....+.+.+|++++++++||||+++++++...+..++
T Consensus 44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 123 (373)
T 2qol_A 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI 123 (373)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEE
T ss_pred HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEE
Confidence 457899999999999999999864 57789999997643 3345679999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCC
Q 005224 449 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 528 (707)
Q Consensus 449 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~ 528 (707)
||||+++|+|.++++.. ...+++..++.++.||++||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 124 v~e~~~~~sL~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 199 (373)
T 2qol_A 124 VTEYMENGSLDSFLRKH-DAQFTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLGRVLED 199 (373)
T ss_dssp EEECCTTCBHHHHHHTT-TTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCC--------
T ss_pred EEeCCCCCcHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCcceEEEcCCCCEEECcCcccccccc
Confidence 99999999999999754 345999999999999999999999998 99999999999999999999999999987643
Q ss_pred CCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHhhcccchhhcc
Q 005224 529 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVID 607 (707)
Q Consensus 529 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 607 (707)
.... ........+++.|+|||++.+..++.++|||||||++|||++ |+.||...... +.... +..
T Consensus 200 ~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~-~~~~~---------i~~ 265 (373)
T 2qol_A 200 DPEA----AYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-DVIKA---------VDE 265 (373)
T ss_dssp ------------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHH-HHHHH---------HHT
T ss_pred CCcc----ceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHH-HHHHH---------HHc
Confidence 2210 111122345778999999999999999999999999999998 99999755432 11111 111
Q ss_pred CCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhc
Q 005224 608 GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNM 652 (707)
Q Consensus 608 ~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~ 652 (707)
+.....+..++..+.+++..||+.+|.+||++.++++.|+.+...
T Consensus 266 ~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~ 310 (373)
T 2qol_A 266 GYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310 (373)
T ss_dssp TEECCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred CCCCCCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhC
Confidence 112234556778899999999999999999999999999988653
No 75
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=1.5e-42 Score=384.37 Aligned_cols=265 Identities=30% Similarity=0.462 Sum_probs=216.1
Q ss_pred HHHHHHhcCCCccceEeeeCceEEEEEEeCCCcEEEEEEeccCChhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEE
Q 005224 368 GEMALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQM 447 (707)
Q Consensus 368 ~~l~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~ 447 (707)
+.++...++|+..+.||+|+||.||+|.++++..||||+++... ...+.+.+|+++|++++||||+++++++.. +..+
T Consensus 177 ~~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~ 254 (452)
T 1fmk_A 177 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIY 254 (452)
T ss_dssp TCSBCCGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCE
T ss_pred cccccChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceE
Confidence 34455667899999999999999999999888889999998644 335689999999999999999999999876 6789
Q ss_pred EEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCC
Q 005224 448 LVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAP 527 (707)
Q Consensus 448 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~ 527 (707)
+||||+++|+|.+++.......+++..++.++.|++.||+|||+++ |+||||||+|||+++++.+||+|||+++...
T Consensus 255 iv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~ 331 (452)
T 1fmk_A 255 IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIE 331 (452)
T ss_dssp EEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCCCTTC---
T ss_pred EEehhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChhhEEECCCCCEEECCCccceecC
Confidence 9999999999999997654456899999999999999999999999 9999999999999999999999999998654
Q ss_pred CCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHhhcccchhhc
Q 005224 528 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVI 606 (707)
Q Consensus 528 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~ 606 (707)
... ........++..|+|||++.+..++.++|||||||++|||++ |+.||...... +... .+.
T Consensus 332 ~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~-~~~~---------~i~ 395 (452)
T 1fmk_A 332 DNE------YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR-EVLD---------QVE 395 (452)
T ss_dssp -----------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH-HHHH---------HHH
T ss_pred CCc------eecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHH-HHHH---------HHH
Confidence 321 111223456788999999999999999999999999999999 99999754432 1111 112
Q ss_pred cCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcC
Q 005224 607 DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMM 653 (707)
Q Consensus 607 ~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~ 653 (707)
.+.....+..++..+.+++.+||+.+|++||++.++++.|+.+....
T Consensus 396 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~~ 442 (452)
T 1fmk_A 396 RGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTST 442 (452)
T ss_dssp TTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCS
T ss_pred cCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhccC
Confidence 22333456677889999999999999999999999999999876543
No 76
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=1e-42 Score=364.33 Aligned_cols=254 Identities=26% Similarity=0.384 Sum_probs=197.5
Q ss_pred hcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCChh--------------------------hHHHHHHHHHHHH
Q 005224 374 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ--------------------------GEKEFLTEIQFLS 426 (707)
Q Consensus 374 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~--------------------------~~~~~~~E~~~l~ 426 (707)
.++|++.+.||+|+||.||+|... +++.||||++...... ..+.+.+|+++++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 468999999999999999999964 7899999998654321 1246889999999
Q ss_pred ccCCCcceeEEEEEEe--CCeEEEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCC
Q 005224 427 RLHHRNLVSLVGYCDE--EGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKA 504 (707)
Q Consensus 427 ~l~H~nIv~l~~~~~~--~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp 504 (707)
+++||||+++++++.+ .+..++||||+++++|.+++. ...+++..++.++.|+++||+|||+.+ |+||||||
T Consensus 92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp 165 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPT---LKPLSEDQARFYFQDLIKGIEYLHYQK---IIHRDIKP 165 (298)
T ss_dssp TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSC---SSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCG
T ss_pred hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCH
Confidence 9999999999999986 568999999999999987653 346999999999999999999999999 99999999
Q ss_pred CCEEEcCCCcEEEeeecccccCCCCCCCCccccceecccccCCCccchhhhccCC---CCCchhhHHHHHHHHHHHcCCC
Q 005224 505 SNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHK---LTDKSDVYSLGVVFLELLTGMQ 581 (707)
Q Consensus 505 ~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~s~~sDVwS~Gvll~elltG~~ 581 (707)
+|||++.++.+||+|||+++...... .......||+.|+|||++.+.. ++.++|||||||++|||++|+.
T Consensus 166 ~Nil~~~~~~~kl~Dfg~~~~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~ 238 (298)
T 2zv2_A 166 SNLLVGEDGHIKIADFGVSNEFKGSD-------ALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQC 238 (298)
T ss_dssp GGEEECTTSCEEECCCTTCEECSSSS-------CEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSC
T ss_pred HHEEECCCCCEEEecCCCcccccccc-------ccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCC
Confidence 99999999999999999998754321 1233457899999999998765 3778999999999999999999
Q ss_pred CCCCCchhHHHHHHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCC
Q 005224 582 PISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTP 661 (707)
Q Consensus 582 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~ 661 (707)
||...... .. ...+.......|. .+..++...
T Consensus 239 pf~~~~~~-~~-----------------------------~~~~~~~~~~~~~------------------~~~~~~~l~ 270 (298)
T 2zv2_A 239 PFMDERIM-CL-----------------------------HSKIKSQALEFPD------------------QPDIAEDLK 270 (298)
T ss_dssp SSCCSSHH-HH-----------------------------HHHHHHCCCCCCS------------------SSCCCHHHH
T ss_pred CCCCccHH-HH-----------------------------HHHHhcccCCCCC------------------ccccCHHHH
Confidence 99653321 00 0000000000010 011222334
Q ss_pred ccccCCCCCCCCCCCCCCcCCCCCCCC
Q 005224 662 EFINSEHTSKEETPPSSSSMLKHPYVS 688 (707)
Q Consensus 662 dll~~~L~~dP~~R~sa~e~L~Hp~f~ 688 (707)
++|.+||..||++|||++|+|+||||+
T Consensus 271 ~li~~~l~~dp~~R~s~~e~l~hp~~~ 297 (298)
T 2zv2_A 271 DLITRMLDKNPESRIVVPEIKLHPWVT 297 (298)
T ss_dssp HHHHHHTCSCTTTSCCHHHHTTCHHHH
T ss_pred HHHHHHhhcChhhCCCHHHHhcCcccc
Confidence 688889999999999999999999985
No 77
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=3.8e-42 Score=364.63 Aligned_cols=259 Identities=20% Similarity=0.290 Sum_probs=185.4
Q ss_pred cceEeeeCceEEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHccC-CCcceeEEEEEEeCCeEEEEEecCCCCC
Q 005224 380 STQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLH-HRNLVSLVGYCDEEGEQMLVYEFMSNGT 457 (707)
Q Consensus 380 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~lV~E~~~~gs 457 (707)
.+.||+|+||+||+|... +++.||||++... ....+.+|+.+++.+. ||||+++++++.+....++||||+++|+
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~ 92 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGE 92 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCB
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCc
Confidence 478999999999999975 6899999999642 3467789999999997 9999999999999999999999999999
Q ss_pred HHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCC---cEEEeeecccccCCCCCCCCc
Q 005224 458 LRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKF---TAKVADFGLSRLAPVPDIEGI 534 (707)
Q Consensus 458 L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~---~~kl~DFGla~~~~~~~~~~~ 534 (707)
|.+++... ..+++..++.++.|++.||+|||+.+ |+||||||+|||++.++ .+||+|||+++......
T Consensus 93 L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~---- 163 (325)
T 3kn6_A 93 LFERIKKK--KHFSETEASYIMRKLVSAVSHMHDVG---VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDN---- 163 (325)
T ss_dssp HHHHHHHC--SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEEC----CEEEECCCTTCEECCC------
T ss_pred HHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---CeecCCCHHHEEEecCCCcccEEEeccccceecCCCC----
Confidence 99999764 45999999999999999999999999 99999999999998765 89999999998654321
Q ss_pred cccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCCCCCCC
Q 005224 535 VPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYP 614 (707)
Q Consensus 535 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 614 (707)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||........ . ..
T Consensus 164 ---~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~-------~-------------~~ 220 (325)
T 3kn6_A 164 ---QPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLT-------C-------------TS 220 (325)
T ss_dssp -----------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC--------------C-------------CC
T ss_pred ---CcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccc-------c-------------cc
Confidence 223345689999999999999999999999999999999999999964322100 0 00
Q ss_pred hHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCCCCCCCCCCCC
Q 005224 615 SECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSSDVS 692 (707)
Q Consensus 615 ~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f~~~~~ 692 (707)
..+++...........+.. ....++...+||.+||..||++|||++|+++||||.....
T Consensus 221 ------~~~~~~~i~~~~~~~~~~~-------------~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h~w~~~~~~ 279 (325)
T 3kn6_A 221 ------AVEIMKKIKKGDFSFEGEA-------------WKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYNEWLQDGSQ 279 (325)
T ss_dssp ------HHHHHHHHTTTCCCCCSHH-------------HHTSCHHHHHHHHHHHCCCTTTCCCTTTSTTCGGGCTTCC
T ss_pred ------HHHHHHHHHcCCCCCCccc-------------ccCCCHHHHHHHHHHCCCChhHCCCHHHHhcChhhccCcc
Confidence 0011111111111000000 0112334457999999999999999999999999987654
No 78
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=1.6e-41 Score=354.71 Aligned_cols=261 Identities=25% Similarity=0.382 Sum_probs=209.4
Q ss_pred hcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCC---hhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEE
Q 005224 374 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 449 (707)
Q Consensus 374 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV 449 (707)
.++|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+.++++++||||+++++++...+..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 89 (294)
T 4eqm_A 10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLV 89 (294)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEE
T ss_pred hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEE
Confidence 467999999999999999999965 78999999985432 23346789999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCC
Q 005224 450 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 529 (707)
Q Consensus 450 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~ 529 (707)
|||+++++|.+++.... ++++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++.....
T Consensus 90 ~e~~~g~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 164 (294)
T 4eqm_A 90 MEYIEGPTLSEYIESHG--PLSVDTAINFTNQILDGIKHAHDMR---IVHRDIKPQNILIDSNKTLKIFDFGIAKALSET 164 (294)
T ss_dssp EECCCSCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCSSSTTC---
T ss_pred EeCCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEEeCCCccccccc
Confidence 99999999999997653 5899999999999999999999999 999999999999999999999999999865432
Q ss_pred CCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCC
Q 005224 530 DIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGN 609 (707)
Q Consensus 530 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 609 (707)
. ........||+.|+|||++.+..++.++|||||||++|||++|+.||............. .. .....
T Consensus 165 ~------~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~-~~-~~~~~---- 232 (294)
T 4eqm_A 165 S------LTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHI-QD-SVPNV---- 232 (294)
T ss_dssp ----------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHHHHH-SS-CCCCH----
T ss_pred c------ccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHh-hc-cCCCc----
Confidence 2 122334568999999999999999999999999999999999999997655432221111 11 00000
Q ss_pred CCCCChHHHHHHHHHHHHhcccCCCCCC-CHHHHHHHHHHhhh
Q 005224 610 MGSYPSECVEKFIKLALKCCQDETDARP-SMSEVMRELESIWN 651 (707)
Q Consensus 610 ~~~~~~~~~~~l~~l~~~c~~~~p~~RP-t~~~v~~~L~~~~~ 651 (707)
....+.+.+..+.+++.+|++.+|.+|| ++.++.+.|+.+..
T Consensus 233 ~~~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~ 275 (294)
T 4eqm_A 233 TTDVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLH 275 (294)
T ss_dssp HHHSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSS
T ss_pred chhcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHh
Confidence 0112344567899999999999999998 88999988887644
No 79
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=3.3e-42 Score=378.96 Aligned_cols=200 Identities=23% Similarity=0.306 Sum_probs=175.9
Q ss_pred hcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHcc------CCCcceeEEEEEEeCCeE
Q 005224 374 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL------HHRNLVSLVGYCDEEGEQ 446 (707)
Q Consensus 374 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l------~H~nIv~l~~~~~~~~~~ 446 (707)
..+|++.+.||+|+||+||+|... +++.||||++... ....+.+.+|+++++.+ .|+||+++++++...+..
T Consensus 96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~ 174 (429)
T 3kvw_A 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE-KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHI 174 (429)
T ss_dssp TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEE
T ss_pred cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc-cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeE
Confidence 457999999999999999999865 6899999999763 33346778888888887 577999999999999999
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCc--EEEeeecccc
Q 005224 447 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFT--AKVADFGLSR 524 (707)
Q Consensus 447 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~--~kl~DFGla~ 524 (707)
++||||+. ++|.+++.......+++..++.++.||++||+|||+.+ |+||||||+|||++.++. +||+|||+++
T Consensus 175 ~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlKp~NILl~~~~~~~vkL~DFG~a~ 250 (429)
T 3kvw_A 175 CMTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNR---IIHCDLKPENILLKQQGRSGIKVIDFGSSC 250 (429)
T ss_dssp EEEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHT---EECSCCSGGGEEESSTTSCCEEECCCTTCE
T ss_pred EEEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEEccCCCcceEEeecccce
Confidence 99999995 69999998876667999999999999999999999998 999999999999999987 9999999997
Q ss_pred cCCCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCch
Q 005224 525 LAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKN 588 (707)
Q Consensus 525 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~elltG~~pf~~~~~ 588 (707)
.... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.....
T Consensus 251 ~~~~----------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~ 304 (429)
T 3kvw_A 251 YEHQ----------RVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDE 304 (429)
T ss_dssp ETTC----------CCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred ecCC----------cccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCCH
Confidence 6432 12345789999999999999999999999999999999999999975543
No 80
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=1.8e-42 Score=365.36 Aligned_cols=282 Identities=20% Similarity=0.310 Sum_probs=204.5
Q ss_pred cCCCcc-ceEeeeCceEEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHcc-CCCcceeEEEEEEeCCeEEEEEe
Q 005224 375 NNFNSS-TQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQMLVYE 451 (707)
Q Consensus 375 ~~~~~~-~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lV~E 451 (707)
++|.+. +.||+|+||+||+|... +++.||||++........+.+.+|++++.++ +||||+++++++.+.+..++|||
T Consensus 12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e 91 (316)
T 2ac3_A 12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFE 91 (316)
T ss_dssp TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEE
Confidence 567774 78999999999999954 7999999999776555567899999999985 79999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCc---EEEeeecccccCCC
Q 005224 452 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFT---AKVADFGLSRLAPV 528 (707)
Q Consensus 452 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~---~kl~DFGla~~~~~ 528 (707)
|+++|+|.+++.... .+++..++.++.|++.||+|||+.+ |+||||||+|||++.++. +||+|||+++....
T Consensus 92 ~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~ 166 (316)
T 2ac3_A 92 KMRGGSILSHIHKRR--HFNELEASVVVQDVASALDFLHNKG---IAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKL 166 (316)
T ss_dssp CCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEESCSSSSCSEEECCTTCCC----
T ss_pred cCCCCcHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHhCC---ceeCCCCHHHEEEccCCCcCceEEEEccCcccccc
Confidence 999999999997643 5899999999999999999999998 999999999999998776 99999999976543
Q ss_pred CCCCCccccceecccccCCCccchhhhcc-----CCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccch
Q 005224 529 PDIEGIVPAHVSTVVKGTPGYLDPEYFLT-----HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMF 603 (707)
Q Consensus 529 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~s~~sDVwS~Gvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~ 603 (707)
................||+.|+|||++.+ ..++.++|||||||++|||++|+.||....... ..+
T Consensus 167 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~----------~~~ 236 (316)
T 2ac3_A 167 NGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSD----------CGW 236 (316)
T ss_dssp ---------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSC----------SCC
T ss_pred CCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCccccccc----------ccc
Confidence 22111111122234568999999999975 568899999999999999999999996533210 000
Q ss_pred hhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCCC
Q 005224 604 SVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLK 683 (707)
Q Consensus 604 ~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~ 683 (707)
............+.+.+...... -|. . .....+....+||.+||..||++|||++|+|+
T Consensus 237 -----~~~~~~~~~~~~~~~~i~~~~~~----~~~-~-----------~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 295 (316)
T 2ac3_A 237 -----DRGEACPACQNMLFESIQEGKYE----FPD-K-----------DWAHISCAAKDLISKLLVRDAKQRLSAAQVLQ 295 (316)
T ss_dssp ---------CCHHHHHHHHHHHHHCCCC----CCH-H-----------HHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred -----cccccchhHHHHHHHHHhccCcc----cCc-h-----------hcccCCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence 00001111222222222221110 010 0 00122334568999999999999999999999
Q ss_pred CCCCCCCCC
Q 005224 684 HPYVSSDVS 692 (707)
Q Consensus 684 Hp~f~~~~~ 692 (707)
||||.+...
T Consensus 296 hp~~~~~~~ 304 (316)
T 2ac3_A 296 HPWVQGCAP 304 (316)
T ss_dssp STTCC----
T ss_pred ChhhcCCCC
Confidence 999987544
No 81
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=1.1e-42 Score=374.02 Aligned_cols=260 Identities=22% Similarity=0.311 Sum_probs=196.3
Q ss_pred hcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEec
Q 005224 374 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 452 (707)
Q Consensus 374 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E~ 452 (707)
.++|++.+.||+|+||+||+|... +++.||||++..... ..+.+.+|+.+++.++||||+++++++...+..++||||
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 97 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA-IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEY 97 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT-SCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc-ccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEe
Confidence 468999999999999999999976 789999999976433 335788999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCc--EEEeeecccccCCCCC
Q 005224 453 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFT--AKVADFGLSRLAPVPD 530 (707)
Q Consensus 453 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~--~kl~DFGla~~~~~~~ 530 (707)
+++|+|.+++.... .+++..++.++.|++.||+|||+.+ |+||||||+|||++.++. +||+|||+++.....
T Consensus 98 ~~~~~L~~~l~~~~--~~~~~~~~~i~~ql~~~L~~LH~~~---ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~- 171 (361)
T 3uc3_A 98 ASGGELYERICNAG--RFSEDEARFFFQQLLSGVSYCHSMQ---ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLH- 171 (361)
T ss_dssp CCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTT---CCSCCCCGGGEEECSSSSCCEEECCCCCC-------
T ss_pred CCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEcCCCCceEEEeecCcccccccc-
Confidence 99999999997643 4899999999999999999999999 999999999999987765 999999999743221
Q ss_pred CCCccccceecccccCCCccchhhhccCCCCCc-hhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCC
Q 005224 531 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDK-SDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGN 609 (707)
Q Consensus 531 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~-sDVwS~Gvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 609 (707)
.......||+.|+|||++.+..++.+ +|||||||++|||++|+.||........
T Consensus 172 -------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~------------------ 226 (361)
T 3uc3_A 172 -------SQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRD------------------ 226 (361)
T ss_dssp ----------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCC------------------
T ss_pred -------CCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHH------------------
Confidence 12234569999999999998887766 8999999999999999999964322100
Q ss_pred CCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCCCCCCCCC
Q 005224 610 MGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSS 689 (707)
Q Consensus 610 ~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f~~ 689 (707)
....+..+ ...... .|. ....++.+.+||.+||..||++|||++|+|+||||..
T Consensus 227 -------~~~~~~~~----~~~~~~-~~~--------------~~~~s~~~~~li~~~L~~dP~~Rps~~ell~hp~f~~ 280 (361)
T 3uc3_A 227 -------YRKTIQRI----LSVKYS-IPD--------------DIRISPECCHLISRIFVADPATRISIPEIKTHSWFLK 280 (361)
T ss_dssp -------HHHHHHHH----HTTCCC-CCT--------------TSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTSHHHHT
T ss_pred -------HHHHHHHH----hcCCCC-CCC--------------cCCCCHHHHHHHHHHccCChhHCcCHHHHHhCcchhc
Confidence 00000000 000000 000 0011223347888899999999999999999999865
Q ss_pred CC
Q 005224 690 DV 691 (707)
Q Consensus 690 ~~ 691 (707)
..
T Consensus 281 ~~ 282 (361)
T 3uc3_A 281 NL 282 (361)
T ss_dssp TC
T ss_pred CC
Confidence 43
No 82
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=2.8e-42 Score=357.98 Aligned_cols=263 Identities=25% Similarity=0.429 Sum_probs=216.3
Q ss_pred HHHHHhcCCCccceEeeeCceEEEEEEeCCCcEEEEEEeccCChhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEE
Q 005224 369 EMALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 448 (707)
Q Consensus 369 ~l~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~l 448 (707)
.+....++|++.+.||+|+||+||+|.+++++.||||++..... ..+++.+|++++++++||||+++++++.+.+..++
T Consensus 18 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l 96 (283)
T 3gen_A 18 SWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFI 96 (283)
T ss_dssp TTBCCGGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred CccCCHHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCC-CHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEE
Confidence 34455678999999999999999999998889999999986433 35679999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCC
Q 005224 449 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 528 (707)
Q Consensus 449 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~ 528 (707)
||||+++++|.+++... ...+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++....
T Consensus 97 v~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~ 172 (283)
T 3gen_A 97 ITEYMANGCLLNYLREM-RHRFQTQQLLEMCKDVCEAMEYLESKQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD 172 (283)
T ss_dssp EECCCTTCBHHHHHHCG-GGCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCSGGGEEECTTSCEEECSTTGGGGBCC
T ss_pred EEeccCCCcHHHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCccceEEEcCCCCEEEccccccccccc
Confidence 99999999999999763 235999999999999999999999999 99999999999999999999999999986543
Q ss_pred CCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHhhcccchhhcc
Q 005224 529 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVID 607 (707)
Q Consensus 529 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 607 (707)
.. ........+|+.|+|||++.+..++.++||||||+++|||++ |+.||........ ... +..
T Consensus 173 ~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~-~~~---------~~~ 236 (283)
T 3gen_A 173 DE------YTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSET-AEH---------IAQ 236 (283)
T ss_dssp HH------HHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHH-HHH---------HHT
T ss_pred cc------cccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhHH-HHH---------Hhc
Confidence 21 111223446778999999999999999999999999999998 9999976543211 111 111
Q ss_pred CCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhc
Q 005224 608 GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNM 652 (707)
Q Consensus 608 ~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~ 652 (707)
......+..++..+.+++..||+.+|.+||++.++++.|+++.+.
T Consensus 237 ~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~~ 281 (283)
T 3gen_A 237 GLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDE 281 (283)
T ss_dssp TCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ccCCCCCCcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHhhc
Confidence 222233445567899999999999999999999999999987653
No 83
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=2.9e-42 Score=370.50 Aligned_cols=270 Identities=25% Similarity=0.428 Sum_probs=220.6
Q ss_pred ccHHHHHHHhcCCCccceEeeeCceEEEEEEe------CCCcEEEEEEeccCCh-hhHHHHHHHHHHHHcc-CCCcceeE
Q 005224 365 FTYGEMALATNNFNSSTQIGQGGYGKVYKGIL------PDGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRL-HHRNLVSL 436 (707)
Q Consensus 365 ~~~~~l~~~~~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l-~H~nIv~l 436 (707)
+...++....++|++.+.||+|+||.||+|.+ .+++.||||++..... ...+.+.+|+++++++ +||||+++
T Consensus 12 ~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~ 91 (359)
T 3vhe_A 12 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 91 (359)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred CCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeee
Confidence 44566777789999999999999999999983 2468999999976433 3346799999999999 79999999
Q ss_pred EEEEEeCC-eEEEEEecCCCCCHHHHHhhcCC------------------------------------------------
Q 005224 437 VGYCDEEG-EQMLVYEFMSNGTLRDQLSAKSK------------------------------------------------ 467 (707)
Q Consensus 437 ~~~~~~~~-~~~lV~E~~~~gsL~~~l~~~~~------------------------------------------------ 467 (707)
++++.+.+ ..++||||+++|+|.++++....
T Consensus 92 ~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (359)
T 3vhe_A 92 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEK 171 (359)
T ss_dssp EEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC------------------------------------------
T ss_pred eeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCcccccccccccccc
Confidence 99998765 48999999999999999976432
Q ss_pred ----------------CCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCC
Q 005224 468 ----------------EPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 531 (707)
Q Consensus 468 ----------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 531 (707)
..+++..++.++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+++.......
T Consensus 172 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~---ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 248 (359)
T 3vhe_A 172 SLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD 248 (359)
T ss_dssp ------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTT
T ss_pred ccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChhhEEEcCCCcEEEEeccceeeeccccc
Confidence 12899999999999999999999999 99999999999999999999999999986543221
Q ss_pred CCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHhhcccchhhccCCC
Q 005224 532 EGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 610 (707)
Q Consensus 532 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 610 (707)
........||+.|+|||++.+..++.++|||||||++|||++ |+.||............ +..+..
T Consensus 249 -----~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~---------~~~~~~ 314 (359)
T 3vhe_A 249 -----YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR---------LKEGTR 314 (359)
T ss_dssp -----CEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHH---------HHHTCC
T ss_pred -----chhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHH---------HHcCCC
Confidence 123345568899999999999999999999999999999998 99999754432221111 111222
Q ss_pred CCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 005224 611 GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 651 (707)
Q Consensus 611 ~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~ 651 (707)
...+..++..+.+++..||+.+|.+||++.++++.|+.+..
T Consensus 315 ~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~ 355 (359)
T 3vhe_A 315 MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 355 (359)
T ss_dssp CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHH
Confidence 33455566789999999999999999999999999998765
No 84
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=6e-43 Score=371.50 Aligned_cols=286 Identities=22% Similarity=0.350 Sum_probs=203.6
Q ss_pred HhcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCChhh--HHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEE
Q 005224 373 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQG--EKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 449 (707)
Q Consensus 373 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~--~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV 449 (707)
..++|++.+.||+|+||+||+|... +++.||||++....... .+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 111 (329)
T 3gbz_A 32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLI 111 (329)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEE
T ss_pred chhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEE
Confidence 3467999999999999999999964 78999999997543322 35678999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEE-----cCCCcEEEeeecccc
Q 005224 450 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILL-----DHKFTAKVADFGLSR 524 (707)
Q Consensus 450 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl-----~~~~~~kl~DFGla~ 524 (707)
|||++ |+|.+++.... .+++..++.++.||+.||+|||+.+ |+||||||+|||+ ++++.+||+|||+++
T Consensus 112 ~e~~~-~~L~~~~~~~~--~~~~~~~~~i~~ql~~~l~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~ 185 (329)
T 3gbz_A 112 FEYAE-NDLKKYMDKNP--DVSMRVIKSFLYQLINGVNFCHSRR---CLHRDLKPQNLLLSVSDASETPVLKIGDFGLAR 185 (329)
T ss_dssp EECCS-EEHHHHHHHCT--TCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEEC-----CCEEEECCTTHHH
T ss_pred EecCC-CCHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHhCC---EECCCCCHHHEEEecCCCCccceEEECcCCCcc
Confidence 99997 59999997653 4899999999999999999999999 9999999999999 455569999999998
Q ss_pred cCCCCCCCCccccceecccccCCCccchhhhccC-CCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccch
Q 005224 525 LAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMF 603 (707)
Q Consensus 525 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~sDVwS~Gvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~ 603 (707)
...... .......||+.|+|||++.+. .++.++|||||||++|||++|+.||........... .......
T Consensus 186 ~~~~~~-------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~-~~~~~~~- 256 (329)
T 3gbz_A 186 AFGIPI-------RQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFK-IFEVLGL- 256 (329)
T ss_dssp HHC------------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH-HHHHHCC-
T ss_pred ccCCcc-------cccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHH-HHHHhCC-
Confidence 654221 223345679999999999874 589999999999999999999999976544222111 1110000
Q ss_pred hhccCCCCCCChHHHHHHHHHHHHhcccCCCCC-CCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCC
Q 005224 604 SVIDGNMGSYPSECVEKFIKLALKCCQDETDAR-PSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSML 682 (707)
Q Consensus 604 ~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~R-Pt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L 682 (707)
......+. ... .....+..|..+ ......+. ...++.+.+||.+||..||++|||++|+|
T Consensus 257 ----~~~~~~~~-----~~~-~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~li~~~L~~dP~~R~t~~e~l 317 (329)
T 3gbz_A 257 ----PDDTTWPG-----VTA-LPDWKQSFPKFRGKTLKRVLG---------ALLDDEGLDLLTAMLEMDPVKRISAKNAL 317 (329)
T ss_dssp ----CCTTTSTT-----GGG-STTCCTTCCCCCCCCHHHHHG---------GGSCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred ----Cchhhhhh-----hhh-hhhhhhhhhhhccccHhhhcc---------cccCHHHHHHHHHHccCChhhCCCHHHHh
Confidence 00000000 000 000001111111 12221111 11233456899999999999999999999
Q ss_pred CCCCCCCCCC
Q 005224 683 KHPYVSSDVS 692 (707)
Q Consensus 683 ~Hp~f~~~~~ 692 (707)
+||||++..+
T Consensus 318 ~hp~f~~~~~ 327 (329)
T 3gbz_A 318 EHPYFSHNDF 327 (329)
T ss_dssp TSGGGSSSCS
T ss_pred CCcccCCCCC
Confidence 9999998654
No 85
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=3.8e-42 Score=367.10 Aligned_cols=266 Identities=29% Similarity=0.486 Sum_probs=218.7
Q ss_pred HHHHhcCCCccceEeeeCceEEEEEEeC------CCcEEEEEEeccCCh-hhHHHHHHHHHHHHccCCCcceeEEEEEEe
Q 005224 370 MALATNNFNSSTQIGQGGYGKVYKGILP------DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDE 442 (707)
Q Consensus 370 l~~~~~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~ 442 (707)
+....++|++.+.||+|+||.||+|... +++.||||++..... ...+.+.+|++++++++||||+++++++.+
T Consensus 42 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~ 121 (343)
T 1luf_A 42 LEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAV 121 (343)
T ss_dssp TBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS
T ss_pred eEecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc
Confidence 3445678999999999999999999974 348999999986433 335679999999999999999999999999
Q ss_pred CCeEEEEEecCCCCCHHHHHhhcC----------------------CCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEec
Q 005224 443 EGEQMLVYEFMSNGTLRDQLSAKS----------------------KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHR 500 (707)
Q Consensus 443 ~~~~~lV~E~~~~gsL~~~l~~~~----------------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~ 500 (707)
.+..++||||+++|+|.+++.... ...+++..++.++.||++||+|||+.+ |+||
T Consensus 122 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~---ivH~ 198 (343)
T 1luf_A 122 GKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERK---FVHR 198 (343)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCS
T ss_pred CCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eecC
Confidence 999999999999999999997642 256999999999999999999999999 9999
Q ss_pred CCCCCCEEEcCCCcEEEeeecccccCCCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc-C
Q 005224 501 DIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-G 579 (707)
Q Consensus 501 Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~ellt-G 579 (707)
||||+|||++.++.+||+|||+++....... ........+|+.|+|||++.+..++.++|||||||++|||++ |
T Consensus 199 Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~-----~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g 273 (343)
T 1luf_A 199 DLATRNCLVGENMVVKIADFGLSRNIYSADY-----YKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYG 273 (343)
T ss_dssp CCSGGGEEECGGGCEEECCCSCHHHHTGGGC-----BC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTT
T ss_pred CCCcceEEECCCCeEEEeecCCCcccccCcc-----ccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcC
Confidence 9999999999999999999999976532211 112234467889999999999999999999999999999999 9
Q ss_pred CCCCCCCchhHHHHHHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcC
Q 005224 580 MQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMM 653 (707)
Q Consensus 580 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~ 653 (707)
..||...... +.. ..+..+.....+..++..+.+++..||+.+|.+||++.++++.|+++....
T Consensus 274 ~~p~~~~~~~-~~~---------~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~~ 337 (343)
T 1luf_A 274 LQPYYGMAHE-EVI---------YYVRDGNILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCERA 337 (343)
T ss_dssp CCTTTTSCHH-HHH---------HHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC--
T ss_pred CCcCCCCChH-HHH---------HHHhCCCcCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhhh
Confidence 9999754431 111 112223334456677788999999999999999999999999999876543
No 86
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=1.1e-42 Score=374.97 Aligned_cols=244 Identities=23% Similarity=0.306 Sum_probs=185.6
Q ss_pred hcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCCh---hhHHHHHHHHHH-HHccCCCcceeEEEEEEeCCeEEE
Q 005224 374 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQF-LSRLHHRNLVSLVGYCDEEGEQML 448 (707)
Q Consensus 374 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~---~~~~~~~~E~~~-l~~l~H~nIv~l~~~~~~~~~~~l 448 (707)
.++|+..+.||+|+||.||+|+.+ +++.||||++..... .....+.+|..+ ++.++||||+++++++.+.+..++
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~l 116 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYF 116 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEE
Confidence 357889999999999999999975 689999999976432 223456677776 577899999999999999999999
Q ss_pred EEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCC
Q 005224 449 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 528 (707)
Q Consensus 449 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~ 528 (707)
||||+++|+|.+++.... .+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++....
T Consensus 117 v~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~g~ikL~DFG~a~~~~~ 191 (373)
T 2r5t_A 117 VLDYINGGELFYHLQRER--CFLEPRARFYAAEIASALGYLHSLN---IVYRDLKPENILLDSQGHIVLTDFGLCKENIE 191 (373)
T ss_dssp EEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCCBCGGGBC
T ss_pred EEeCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCHHHEEECCCCCEEEeeCcccccccc
Confidence 999999999999997643 4889999999999999999999999 99999999999999999999999999985322
Q ss_pred CCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccC
Q 005224 529 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDG 608 (707)
Q Consensus 529 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 608 (707)
. ........||+.|+|||++.+..++.++|||||||++|||++|+.||...... +...... ..
T Consensus 192 ~-------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~-~~~~~i~---------~~ 254 (373)
T 2r5t_A 192 H-------NSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTA-EMYDNIL---------NK 254 (373)
T ss_dssp C-------CCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHH-HHHHHHH---------HS
T ss_pred C-------CCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHH-HHHHHHH---------hc
Confidence 1 12234567999999999999999999999999999999999999999754431 1111111 11
Q ss_pred CCCCCChHHHHHHHHHHHHhcccCCCCCCCHH
Q 005224 609 NMGSYPSECVEKFIKLALKCCQDETDARPSMS 640 (707)
Q Consensus 609 ~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~ 640 (707)
...++...+..+.+++.+|++.+|.+||++.
T Consensus 255 -~~~~~~~~~~~~~~li~~lL~~dp~~R~~~~ 285 (373)
T 2r5t_A 255 -PLQLKPNITNSARHLLEGLLQKDRTKRLGAK 285 (373)
T ss_dssp -CCCCCSSSCHHHHHHHHHHTCSSGGGSTTTT
T ss_pred -ccCCCCCCCHHHHHHHHHHcccCHHhCCCCC
Confidence 1112233344455555666666666665554
No 87
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=6.5e-43 Score=368.24 Aligned_cols=251 Identities=24% Similarity=0.338 Sum_probs=198.1
Q ss_pred hcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCC--hhhHHHHHHHHHHHHcc-CCCcceeEEEEEEeCCeEEEE
Q 005224 374 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQMLV 449 (707)
Q Consensus 374 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lV 449 (707)
.++|+..++||+|+||+||+|... +|+.||||++.... ......+..|+..+..+ +|+||++++++|.+.+..++|
T Consensus 56 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv 135 (311)
T 3p1a_A 56 QQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQ 135 (311)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEE
Confidence 367999999999999999999976 79999999986533 23334556666666655 899999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCC
Q 005224 450 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 529 (707)
Q Consensus 450 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~ 529 (707)
|||+ +++|.+++.... ..+++..++.++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 136 ~e~~-~~~L~~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~ 210 (311)
T 3p1a_A 136 TELC-GPSLQQHCEAWG-ASLPEAQVWGYLRDTLLALAHLHSQG---LVHLDVKPANIFLGPRGRCKLGDFGLLVELGTA 210 (311)
T ss_dssp EECC-CCBHHHHHHHHC-SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECGGGCEEECCCTTCEECC--
T ss_pred Eecc-CCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEECCCCCEEEccceeeeecccC
Confidence 9999 779999987653 46999999999999999999999998 999999999999999999999999999865432
Q ss_pred CCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCC
Q 005224 530 DIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGN 609 (707)
Q Consensus 530 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 609 (707)
. ......||+.|+|||++.+ .++.++|||||||++|||++|..|+...... .. +..+
T Consensus 211 ~--------~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~~~----~~---------~~~~- 267 (311)
T 3p1a_A 211 G--------AGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEGW----QQ---------LRQG- 267 (311)
T ss_dssp ------------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHHHH----HH---------HTTT-
T ss_pred C--------CCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCccHH----HH---------Hhcc-
Confidence 1 2234568999999999876 7899999999999999999997776532210 00 0000
Q ss_pred CCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCCCCCCCCC
Q 005224 610 MGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSS 689 (707)
Q Consensus 610 ~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f~~ 689 (707)
..+.+. ....++.+.+|+.+||..||++|||++|+|+||||+.
T Consensus 268 --~~~~~~-----------------------------------~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 310 (311)
T 3p1a_A 268 --YLPPEF-----------------------------------TAGLSSELRSVLVMMLEPDPKLRATAEALLALPVLRQ 310 (311)
T ss_dssp --CCCHHH-----------------------------------HTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGSC
T ss_pred --CCCccc-----------------------------------ccCCCHHHHHHHHHHcCCChhhCcCHHHHHhCccccC
Confidence 001100 0112233457888999999999999999999999975
No 88
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=4.9e-42 Score=354.94 Aligned_cols=259 Identities=22% Similarity=0.316 Sum_probs=208.9
Q ss_pred hcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEec
Q 005224 374 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 452 (707)
Q Consensus 374 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E~ 452 (707)
.++|++.+.||+|+||+||+|... ++..||+|++........+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 87 (277)
T 3f3z_A 8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMEL 87 (277)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEec
Confidence 467899999999999999999975 5789999999775555667899999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEE---cCCCcEEEeeecccccCCCC
Q 005224 453 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILL---DHKFTAKVADFGLSRLAPVP 529 (707)
Q Consensus 453 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl---~~~~~~kl~DFGla~~~~~~ 529 (707)
+++++|.+++.... .+++..++.++.|++.||+|||+.+ |+||||||+||++ +.++.+||+|||++......
T Consensus 88 ~~~~~L~~~~~~~~--~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~ 162 (277)
T 3f3z_A 88 CTGGELFERVVHKR--VFRESDAARIMKDVLSAVAYCHKLN---VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPG 162 (277)
T ss_dssp CCSCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTT
T ss_pred cCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCCHHHEEEecCCCCCcEEEEecccceeccCc
Confidence 99999999987643 4899999999999999999999999 9999999999999 88899999999999866432
Q ss_pred CCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCC
Q 005224 530 DIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGN 609 (707)
Q Consensus 530 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 609 (707)
. ......||+.|+|||++.+. ++.++|||||||++|||++|+.||......... ... ..+.
T Consensus 163 ~--------~~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~-~~~---------~~~~ 223 (277)
T 3f3z_A 163 K--------MMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVM-LKI---------REGT 223 (277)
T ss_dssp S--------CBCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHH-HHH---------HHCC
T ss_pred c--------chhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCCHHHHH-HHH---------HhCC
Confidence 2 22345689999999998765 899999999999999999999999754331110 000 0000
Q ss_pred CCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCCCCCCCCC
Q 005224 610 MGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSS 689 (707)
Q Consensus 610 ~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f~~ 689 (707)
...+... ....++...+++.+||..||++|||+.|+|+||||..
T Consensus 224 -~~~~~~~-----------------------------------~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~ 267 (277)
T 3f3z_A 224 -FTFPEKD-----------------------------------WLNVSPQAESLIRRLLTKSPKQRITSLQALEHEWFEK 267 (277)
T ss_dssp -CCCCHHH-----------------------------------HTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSHHHHH
T ss_pred -CCCCchh-----------------------------------hhcCCHHHHHHHHHHccCChhhCcCHHHHhcCHHHhc
Confidence 0011100 0112233446888999999999999999999999975
Q ss_pred CCC
Q 005224 690 DVS 692 (707)
Q Consensus 690 ~~~ 692 (707)
...
T Consensus 268 ~~~ 270 (277)
T 3f3z_A 268 QLS 270 (277)
T ss_dssp HHC
T ss_pred ccc
Confidence 443
No 89
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=3.2e-42 Score=386.63 Aligned_cols=203 Identities=24% Similarity=0.420 Sum_probs=179.6
Q ss_pred hcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCCh---hhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEE
Q 005224 374 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 449 (707)
Q Consensus 374 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV 449 (707)
.++|...+.||+|+||.||+|+.+ +|+.||+|++..... .....+.+|++++++++||||+++++++...+..++|
T Consensus 184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 263 (543)
T 3c4z_A 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLV 263 (543)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEE
Confidence 467888999999999999999975 699999999965322 2346788999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhcC--CCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCC
Q 005224 450 YEFMSNGTLRDQLSAKS--KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAP 527 (707)
Q Consensus 450 ~E~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~ 527 (707)
|||+++|+|.+++.... ...+++..++.++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 264 mE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~g---IvHrDLKP~NILl~~~g~vkL~DFGla~~~~ 340 (543)
T 3c4z_A 264 MTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELK 340 (543)
T ss_dssp ECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcC---CcccCCChHHEEEeCCCCEEEeecceeeecc
Confidence 99999999999997643 446999999999999999999999999 9999999999999999999999999998764
Q ss_pred CCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCC
Q 005224 528 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 586 (707)
Q Consensus 528 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~elltG~~pf~~~ 586 (707)
... .......||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 341 ~~~-------~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~ 392 (543)
T 3c4z_A 341 AGQ-------TKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRAR 392 (543)
T ss_dssp TTC-------CCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCT
T ss_pred CCC-------cccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCC
Confidence 321 1123457999999999999999999999999999999999999999653
No 90
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=6.3e-42 Score=360.35 Aligned_cols=285 Identities=23% Similarity=0.332 Sum_probs=209.4
Q ss_pred cCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCChh--hHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEe
Q 005224 375 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ--GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 451 (707)
Q Consensus 375 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~--~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E 451 (707)
++|++.+.||+|+||+||+|... +|+.||||++...... ..+.+.+|++++++++||||+++++++...+..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFE 82 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEE
Confidence 67999999999999999999975 6899999998654332 24678899999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCC
Q 005224 452 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 531 (707)
Q Consensus 452 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 531 (707)
|+++++|.+++... ..+++..++.++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 83 ~~~~~~l~~~~~~~--~~~~~~~~~~i~~~l~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~- 156 (311)
T 4agu_A 83 YCDHTVLHELDRYQ--RGVPEHLVKSITWQTLQAVNFCHKHN---CIHRDVKPENILITKHSVIKLCDFGFARLLTGPS- 156 (311)
T ss_dssp CCSEEHHHHHHHTS--SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECC----
T ss_pred eCCCchHHHHHhhh--cCCCHHHHHHHHHHHHHHHHHHHHCC---CcCCCCChhhEEEcCCCCEEEeeCCCchhccCcc-
Confidence 99999999988643 45899999999999999999999999 9999999999999999999999999998754321
Q ss_pred CCccccceecccccCCCccchhhhcc-CCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCCC
Q 005224 532 EGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 610 (707)
Q Consensus 532 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDVwS~Gvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 610 (707)
.......||..|+|||++.+ ..++.++|||||||++|||++|+.||............... .
T Consensus 157 ------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~-------~---- 219 (311)
T 4agu_A 157 ------DYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKT-------L---- 219 (311)
T ss_dssp ---------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHH-------H----
T ss_pred ------cccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH-------h----
Confidence 12234568999999999986 67899999999999999999999999765442221111000 0
Q ss_pred CCCChHHHHHHHH--HHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCCCCCCCC
Q 005224 611 GSYPSECVEKFIK--LALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVS 688 (707)
Q Consensus 611 ~~~~~~~~~~l~~--l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f~ 688 (707)
..........+.. ........++...... ....+..+....+|+.+||..||++|||++|+|+||||.
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~ 289 (311)
T 4agu_A 220 GDLIPRHQQVFSTNQYFSGVKIPDPEDMEPL----------ELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYFE 289 (311)
T ss_dssp CSCCHHHHHHHHTCGGGTTCCCCCCSSCCCH----------HHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTSGGGT
T ss_pred cccccccccccccccccccCcCCCccccchh----------hhhcccccHHHHHHHHHHccCChhhcCCHHHHhcChHHH
Confidence 0011111000000 0000000111111111 112234445566899999999999999999999999998
Q ss_pred CCCC
Q 005224 689 SDVS 692 (707)
Q Consensus 689 ~~~~ 692 (707)
.-..
T Consensus 290 ~~~~ 293 (311)
T 4agu_A 290 NIRE 293 (311)
T ss_dssp TCC-
T ss_pred hccC
Confidence 7544
No 91
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=7.6e-42 Score=361.67 Aligned_cols=259 Identities=24% Similarity=0.336 Sum_probs=209.9
Q ss_pred hcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCChh------hHHHHHHHHHHHHccCCCcceeEEEEEEeCCeE
Q 005224 374 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ------GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQ 446 (707)
Q Consensus 374 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~------~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~ 446 (707)
.++|++.+.||+|+||.||+|... +|+.||||++...... ..+.+.+|+.+++.++||||+++++++.+.+..
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 90 (321)
T 2a2a_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDV 90 (321)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence 457899999999999999999975 6899999998754321 356799999999999999999999999999999
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCC----cEEEeeecc
Q 005224 447 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKF----TAKVADFGL 522 (707)
Q Consensus 447 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~----~~kl~DFGl 522 (707)
++||||+++++|.+++... ..+++..++.++.|++.||+|||+.+ |+||||||+||+++.++ .+||+|||+
T Consensus 91 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~lH~~~---ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~ 165 (321)
T 2a2a_A 91 VLILELVSGGELFDFLAQK--ESLSEEEATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGL 165 (321)
T ss_dssp EEEECCCCSCBHHHHHHTC--SCEEHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESCTTSSSCCEEECCCTT
T ss_pred EEEEEcCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCChHHEEEecCCCCcCCEEEccCcc
Confidence 9999999999999999653 45899999999999999999999998 99999999999999888 799999999
Q ss_pred cccCCCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccc
Q 005224 523 SRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMM 602 (707)
Q Consensus 523 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~elltG~~pf~~~~~~~~~~~~~~~~~~~ 602 (707)
++...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||....... ......
T Consensus 166 ~~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~i~----- 231 (321)
T 2a2a_A 166 AHEIEDGV--------EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE-TLANIT----- 231 (321)
T ss_dssp CEECCTTC--------CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHH-HHHHHH-----
T ss_pred ceecCccc--------cccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHH-HHHHHH-----
Confidence 98764321 1234568999999999999999999999999999999999999996543211 110000
Q ss_pred hhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCC
Q 005224 603 FSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSML 682 (707)
Q Consensus 603 ~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L 682 (707)
. .....+... ....+....+||.+||..||++|||++|+|
T Consensus 232 ----~-~~~~~~~~~-----------------------------------~~~~~~~~~~li~~~l~~dp~~Rps~~e~l 271 (321)
T 2a2a_A 232 ----S-VSYDFDEEF-----------------------------------FSHTSELAKDFIRKLLVKETRKRLTIQEAL 271 (321)
T ss_dssp ----T-TCCCCCHHH-----------------------------------HTTCCHHHHHHHHTTSCSSTTTSCCHHHHH
T ss_pred ----h-cccccChhh-----------------------------------hcccCHHHHHHHHHHcCCChhhCcCHHHHh
Confidence 0 000011000 011223345789999999999999999999
Q ss_pred CCCCCCCCC
Q 005224 683 KHPYVSSDV 691 (707)
Q Consensus 683 ~Hp~f~~~~ 691 (707)
+||||....
T Consensus 272 ~hp~~~~~~ 280 (321)
T 2a2a_A 272 RHPWITPVD 280 (321)
T ss_dssp HSTTTSCSS
T ss_pred cCccccCCC
Confidence 999998654
No 92
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=8.8e-42 Score=361.39 Aligned_cols=269 Identities=24% Similarity=0.289 Sum_probs=209.0
Q ss_pred HHHhcCCCccceEeeeCceEEEEEEeCCCcEEEEEEeccCChhhHHHHHHHHHHHHccCCCcceeEEEEEEeCC----eE
Q 005224 371 ALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG----EQ 446 (707)
Q Consensus 371 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~----~~ 446 (707)
....++|++.++||+|+||+||+|++. ++.||||++.... .....+.+|+.++++++||||+++++++.... ..
T Consensus 20 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 97 (322)
T 3soc_A 20 YFQSMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQD-KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDL 97 (322)
T ss_dssp EETTEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEE
T ss_pred ccchhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCc-hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceE
Confidence 344578999999999999999999985 7999999997543 23345667999999999999999999997744 47
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhC----------CCCCeEecCCCCCCEEEcCCCcEE
Q 005224 447 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTE----------ADPPVFHRDIKASNILLDHKFTAK 516 (707)
Q Consensus 447 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~----------~~~~ivH~Dlkp~NILl~~~~~~k 516 (707)
++||||+++|+|.++++.. .+++..++.++.|+++||+|||+. + |+||||||+|||++.++.+|
T Consensus 98 ~lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~---ivH~Dlkp~Nill~~~~~~k 171 (322)
T 3soc_A 98 WLITAFHEKGSLSDFLKAN---VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPA---ISHRDIKSKNVLLKNNLTAC 171 (322)
T ss_dssp EEEEECCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECE---EECSCCSGGGEEECTTCCEE
T ss_pred EEEEecCCCCCHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCC---EEeCCCChHhEEECCCCeEE
Confidence 9999999999999999764 399999999999999999999998 7 99999999999999999999
Q ss_pred EeeecccccCCCCCCCCccccceecccccCCCccchhhhccC-----CCCCchhhHHHHHHHHHHHcCCCCCCCCchhH-
Q 005224 517 VADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTH-----KLTDKSDVYSLGVVFLELLTGMQPISHGKNIV- 590 (707)
Q Consensus 517 l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~s~~sDVwS~Gvll~elltG~~pf~~~~~~~- 590 (707)
|+|||+++....... ........||+.|+|||++.+. .++.++|||||||++|||++|+.||....+..
T Consensus 172 L~DFg~a~~~~~~~~-----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~ 246 (322)
T 3soc_A 172 IADFGLALKFEAGKS-----AGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYM 246 (322)
T ss_dssp ECCCTTCEEECTTSC-----CCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCC
T ss_pred EccCCcccccccccC-----ccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhc
Confidence 999999987643321 1122345789999999999873 45568899999999999999999996432100
Q ss_pred -HHHHHHhhc---ccch-hhccCC-CCC-----CChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhc
Q 005224 591 -REVNIAYQS---SMMF-SVIDGN-MGS-----YPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNM 652 (707)
Q Consensus 591 -~~~~~~~~~---~~~~-~~~~~~-~~~-----~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~ 652 (707)
......... .... .+.... ... ....++..+.+++.+||+.+|.+|||+.++++.|+.+.+.
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~~ 319 (322)
T 3soc_A 247 LPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRL 319 (322)
T ss_dssp CTTHHHHCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred cchhhhhccCCchhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 000000000 0000 001111 111 1235677899999999999999999999999999988753
No 93
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=9.7e-42 Score=362.04 Aligned_cols=280 Identities=18% Similarity=0.320 Sum_probs=211.2
Q ss_pred cCCCccceEeeeCceEEEEEEe-CCCcEEEEEEeccCChhhHHHHHHHHHHHHccC-CCcceeEEEEEEe--CCeEEEEE
Q 005224 375 NNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLH-HRNLVSLVGYCDE--EGEQMLVY 450 (707)
Q Consensus 375 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~--~~~~~lV~ 450 (707)
++|++.+.||+|+||+||+|.. .+++.||||++... ..+.+.+|++++++++ ||||+++++++.. ....++||
T Consensus 36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~ 112 (330)
T 3nsz_A 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVF 112 (330)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEE
T ss_pred CceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc---chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEE
Confidence 6788999999999999999996 47899999999753 3467899999999997 9999999999987 66789999
Q ss_pred ecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCC-cEEEeeecccccCCCC
Q 005224 451 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKF-TAKVADFGLSRLAPVP 529 (707)
Q Consensus 451 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~-~~kl~DFGla~~~~~~ 529 (707)
||+++++|.+++.. +++..++.++.|++.||+|||+.+ |+||||||+|||++.++ .+||+|||+++.....
T Consensus 113 e~~~~~~l~~~~~~-----~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~ 184 (330)
T 3nsz_A 113 EHVNNTDFKQLYQT-----LTDYDIRFYMYEILKALDYCHSMG---IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPG 184 (330)
T ss_dssp ECCCCCCHHHHGGG-----CCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETTTTEEEECCCTTCEECCTT
T ss_pred eccCchhHHHHHHh-----CCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCC
Confidence 99999999999843 889999999999999999999999 99999999999999776 8999999999865432
Q ss_pred CCCCccccceecccccCCCccchhhhcc-CCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccC
Q 005224 530 DIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDG 608 (707)
Q Consensus 530 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDVwS~Gvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 608 (707)
. ......|+..|+|||++.+ ..++.++|||||||++|||++|+.||.......+..........
T Consensus 185 ~--------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~------- 249 (330)
T 3nsz_A 185 Q--------EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLG------- 249 (330)
T ss_dssp C--------CCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHC-------
T ss_pred C--------ccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcC-------
Confidence 2 2234468899999999987 67999999999999999999999999766554433322211100
Q ss_pred CCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH--HhhhcC-----CCCCCCCCccccCCCCCCCCCCCCCCcC
Q 005224 609 NMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELE--SIWNMM-----PESDTKTPEFINSEHTSKEETPPSSSSM 681 (707)
Q Consensus 609 ~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~--~~~~~~-----~~~~~~~~dll~~~L~~dP~~R~sa~e~ 681 (707)
...+.+.+.. ......|...+...... ...... ...++.+.+||.+||..||++|||++|+
T Consensus 250 ---------~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~ 317 (330)
T 3nsz_A 250 ---------TEDLYDYIDK---YNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREA 317 (330)
T ss_dssp ---------HHHHHHHHHH---TTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHH
T ss_pred ---------CchhhhHHHH---hccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHH
Confidence 0111111111 11111222221110000 000000 0123445689999999999999999999
Q ss_pred CCCCCCCCCCC
Q 005224 682 LKHPYVSSDVS 692 (707)
Q Consensus 682 L~Hp~f~~~~~ 692 (707)
|+||||.+...
T Consensus 318 l~hp~f~~~~~ 328 (330)
T 3nsz_A 318 MEHPYFYTVVK 328 (330)
T ss_dssp HTSGGGTTCC-
T ss_pred hcCccHhhhcc
Confidence 99999987543
No 94
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=2.1e-42 Score=387.52 Aligned_cols=263 Identities=30% Similarity=0.463 Sum_probs=221.1
Q ss_pred HHHHHhcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEE
Q 005224 369 EMALATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQM 447 (707)
Q Consensus 369 ~l~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~ 447 (707)
+++...++|+..+.||+|+||.||+|.++ ++..||||++.... ...++|.+|+++|++++||||++++++|...+..+
T Consensus 214 ~~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~ 292 (495)
T 1opk_A 214 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFY 292 (495)
T ss_dssp CCBCCGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred ccccCHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEE
Confidence 34455677889999999999999999986 48899999997643 34578999999999999999999999999999999
Q ss_pred EEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCC
Q 005224 448 LVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAP 527 (707)
Q Consensus 448 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~ 527 (707)
+||||+++|+|.+++.......+++..++.++.||++||+|||+++ |+||||||+|||++.++.+||+|||+++...
T Consensus 293 lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 369 (495)
T 1opk_A 293 IITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRNLAARNCLVGENHLVKVADFGLSRLMT 369 (495)
T ss_dssp EEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECGGGCEEECCTTCEECCT
T ss_pred EEEEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChhhEEECCCCcEEEeecccceecc
Confidence 9999999999999998766677999999999999999999999999 9999999999999999999999999998764
Q ss_pred CCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHhhcccchhhc
Q 005224 528 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVI 606 (707)
Q Consensus 528 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~ 606 (707)
... ........++..|+|||++.+..++.++|||||||++|||++ |+.||...... .... .+.
T Consensus 370 ~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~-~~~~---------~~~ 433 (495)
T 1opk_A 370 GDT------YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS-QVYE---------LLE 433 (495)
T ss_dssp TCC------EECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGG-GHHH---------HHH
T ss_pred CCc------eeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHH-HHHH---------HHH
Confidence 322 111223446788999999999999999999999999999999 99999754321 1111 111
Q ss_pred cCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 005224 607 DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 651 (707)
Q Consensus 607 ~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~ 651 (707)
.+.....+..++..+.+++.+||+.+|.+||++.++++.|+.+..
T Consensus 434 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~~ 478 (495)
T 1opk_A 434 KDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 478 (495)
T ss_dssp TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCS
T ss_pred cCCCCCCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHh
Confidence 222334566778889999999999999999999999999987643
No 95
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.2e-41 Score=367.15 Aligned_cols=265 Identities=26% Similarity=0.464 Sum_probs=219.4
Q ss_pred HhcCCCccceEeeeCceEEEEEEeC--------CCcEEEEEEeccCCh-hhHHHHHHHHHHHHcc-CCCcceeEEEEEEe
Q 005224 373 ATNNFNSSTQIGQGGYGKVYKGILP--------DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRL-HHRNLVSLVGYCDE 442 (707)
Q Consensus 373 ~~~~~~~~~~lG~G~~g~Vy~~~~~--------~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~ 442 (707)
..++|.+.+.||+|+||+||+|... ++..||||++..... ...+.+.+|+++++++ +||||+++++++..
T Consensus 67 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~ 146 (382)
T 3tt0_A 67 PRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ 146 (382)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred chhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeecc
Confidence 4568889999999999999999852 346899999976433 3346789999999999 99999999999999
Q ss_pred CCeEEEEEecCCCCCHHHHHhhcC--------------CCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEE
Q 005224 443 EGEQMLVYEFMSNGTLRDQLSAKS--------------KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNIL 508 (707)
Q Consensus 443 ~~~~~lV~E~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NIL 508 (707)
.+..++||||+++|+|.+++.... ...+++..++.++.|++.||+|||+.+ |+||||||+|||
T Consensus 147 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIl 223 (382)
T 3tt0_A 147 DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK---CIHRDLAARNVL 223 (382)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEE
T ss_pred CCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCcceEE
Confidence 999999999999999999998654 245999999999999999999999998 999999999999
Q ss_pred EcCCCcEEEeeecccccCCCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc-CCCCCCCCc
Q 005224 509 LDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGK 587 (707)
Q Consensus 509 l~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~ellt-G~~pf~~~~ 587 (707)
+++++.+||+|||+++....... ........+|+.|+|||++.+..++.++|||||||++|||++ |..||....
T Consensus 224 l~~~~~~kL~DFG~a~~~~~~~~-----~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~ 298 (382)
T 3tt0_A 224 VTEDNVMKIADFGLARDIHHIDY-----YKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP 298 (382)
T ss_dssp ECTTCCEEECSCSCCCCSSCCCT-----TCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred EcCCCcEEEcccCcccccccccc-----cccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCC
Confidence 99999999999999986643321 112233457889999999999999999999999999999999 999996543
Q ss_pred hhHHHHHHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCC
Q 005224 588 NIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPE 655 (707)
Q Consensus 588 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~ 655 (707)
. .+.... +..+.....+..++..+.+++.+||+.+|.+||++.++++.|+.+......
T Consensus 299 ~-~~~~~~---------~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~~ 356 (382)
T 3tt0_A 299 V-EELFKL---------LKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTSN 356 (382)
T ss_dssp H-HHHHHH---------HHTTCCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHSCS
T ss_pred H-HHHHHH---------HHcCCCCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHhc
Confidence 2 111111 112223334556678899999999999999999999999999998876543
No 96
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=4e-42 Score=355.36 Aligned_cols=254 Identities=22% Similarity=0.317 Sum_probs=185.6
Q ss_pred cCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCCh---hhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEE
Q 005224 375 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 450 (707)
Q Consensus 375 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~ 450 (707)
++|++.+.||+|+||+||+|... +++.||+|++..... ...+.+.+|+++++.++||||+++++++.+.+..++||
T Consensus 13 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 92 (275)
T 2eue_A 13 GNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp CCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEEE
T ss_pred cceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEEe
Confidence 57999999999999999999964 789999999875432 23567899999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCC
Q 005224 451 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 530 (707)
Q Consensus 451 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~ 530 (707)
||+ +++|.+++... ..+++..++.++.|++.||+|||+.+ |+||||||+||++++++.+||+|||+++......
T Consensus 93 e~~-~~~l~~~~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 166 (275)
T 2eue_A 93 EYA-GNELFDYIVQR--DKMSEQEARRFFQQIISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN 166 (275)
T ss_dssp ECC-CEEHHHHHHTS--SSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTSCEEECCSSCC-------
T ss_pred hhc-CCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---CeeccCChHhEEECCCCCEEEeecccceeccCcc
Confidence 999 67888888654 35999999999999999999999999 9999999999999999999999999997654321
Q ss_pred CCCccccceecccccCCCccchhhhccCCC-CCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCC
Q 005224 531 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKL-TDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGN 609 (707)
Q Consensus 531 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-s~~sDVwS~Gvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 609 (707)
......||+.|+|||++.+..+ +.++|||||||++|||++|+.||........
T Consensus 167 --------~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~------------------ 220 (275)
T 2eue_A 167 --------FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVL------------------ 220 (275)
T ss_dssp ----------------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSHHHH------------------
T ss_pred --------cccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHH------------------
Confidence 2234468999999999988765 7899999999999999999999965432110
Q ss_pred CCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCCCCCCCCC
Q 005224 610 MGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSS 689 (707)
Q Consensus 610 ~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f~~ 689 (707)
.+.+.......| ...++...+|+.+||+.||++|||++|+|+||||..
T Consensus 221 ------------~~~~~~~~~~~~--------------------~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h~~f~~ 268 (275)
T 2eue_A 221 ------------FKNISNGVYTLP--------------------KFLSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFKV 268 (275)
T ss_dssp ------------HHHHHHTCCCCC--------------------TTSCHHHHHHHHHHSCSSGGGSCCHHHHTTCHHHHT
T ss_pred ------------HHHHHhCCCCCC--------------------ccCCHHHHHHHHHHhhcCHhHCCCHHHHhhCCeecc
Confidence 000011000011 011222346888899999999999999999999987
Q ss_pred CCC
Q 005224 690 DVS 692 (707)
Q Consensus 690 ~~~ 692 (707)
+..
T Consensus 269 ~~~ 271 (275)
T 2eue_A 269 DLP 271 (275)
T ss_dssp TCC
T ss_pred cch
Confidence 643
No 97
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=2.8e-42 Score=380.18 Aligned_cols=301 Identities=23% Similarity=0.298 Sum_probs=208.5
Q ss_pred hcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccC--ChhhHHHHHHHHHHHHccCCCcceeEEEEEEeC-----Ce
Q 005224 374 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEG--SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE-----GE 445 (707)
Q Consensus 374 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~-----~~ 445 (707)
.++|++.+.||+|+||+||+|... +++.||||++... .....+.+.+|+++++.++|+||+++++++... ..
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 104 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE 104 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence 468999999999999999999965 6899999999753 333457889999999999999999999999766 57
Q ss_pred EEEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeeccccc
Q 005224 446 QMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRL 525 (707)
Q Consensus 446 ~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~ 525 (707)
.++||||++ ++|.+++... ..+++..++.++.||++||+|||+.+ |+||||||+|||++.++.+||+|||+|+.
T Consensus 105 ~~lv~e~~~-~~L~~~~~~~--~~l~~~~~~~i~~qil~aL~~LH~~g---ivHrDlkp~NILl~~~~~~kL~DFGla~~ 178 (432)
T 3n9x_A 105 LYIVLEIAD-SDLKKLFKTP--IFLTEEHIKTILYNLLLGENFIHESG---IIHRDLKPANCLLNQDCSVKVCDFGLART 178 (432)
T ss_dssp EEEEEECCS-EEHHHHHHSS--CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEEEecCC-cCHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCC---CCCCCCCHHHeEECCCCCEEEccCCCccc
Confidence 899999995 6999999653 45999999999999999999999999 99999999999999999999999999987
Q ss_pred CCCCCCCCcc---------------ccceecccccCCCccchhhh-ccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchh
Q 005224 526 APVPDIEGIV---------------PAHVSTVVKGTPGYLDPEYF-LTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNI 589 (707)
Q Consensus 526 ~~~~~~~~~~---------------~~~~~~~~~gt~~y~aPE~~-~~~~~s~~sDVwS~Gvll~elltG~~pf~~~~~~ 589 (707)
.......... .........||+.|+|||++ ....++.++|||||||++|||++|..||......
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~ 258 (432)
T 3n9x_A 179 INSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTN 258 (432)
T ss_dssp C-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTCSSGGG
T ss_pred ccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhccccccccccc
Confidence 6533211000 00123566799999999986 4567999999999999999999865555321100
Q ss_pred HHHHHHHhhcccchhhccCC----------CCCCC-hHHHHHHHHHHHHhcccCCC--CCCCHHHHHHHHHHh-------
Q 005224 590 VREVNIAYQSSMMFSVIDGN----------MGSYP-SECVEKFIKLALKCCQDETD--ARPSMSEVMRELESI------- 649 (707)
Q Consensus 590 ~~~~~~~~~~~~~~~~~~~~----------~~~~~-~~~~~~l~~l~~~c~~~~p~--~RPt~~~v~~~L~~~------- 649 (707)
-.-.+.+. ..... ......+..++..+-....+ .+....++.+.+...
T Consensus 259 ------------~~p~f~g~~~~~~~~~~~~~~~~~~~~~~ql~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (432)
T 3n9x_A 259 ------------RFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPIN 326 (432)
T ss_dssp ------------CCCSCCCSCSCC----------CHHHHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCC
T ss_pred ------------ccccCCCccccccCcccccccccccchHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCCCCCCCC
Confidence 00000000 00000 01111111111111000000 000001111111111
Q ss_pred -hhcCCCCCCCCCccccCCCCCCCCCCCCCCcCCCCCCCCCCCC
Q 005224 650 -WNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSSDVS 692 (707)
Q Consensus 650 -~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f~~~~~ 692 (707)
...++..++.+.+||.+||++||++|+|++|+|+||||.+...
T Consensus 327 ~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~~ 370 (432)
T 3n9x_A 327 LKQKYPSISDDGINLLESMLKFNPNKRITIDQALDHPYLKDVRK 370 (432)
T ss_dssp HHHHSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTCGGGTTTCC
T ss_pred HHHHCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcChhhhhccC
Confidence 1123445666778999999999999999999999999987654
No 98
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=9.5e-42 Score=359.28 Aligned_cols=263 Identities=29% Similarity=0.465 Sum_probs=217.5
Q ss_pred HHHhcCCCccceEeeeCceEEEEEEe------CCCcEEEEEEeccCC-hhhHHHHHHHHHHHHccCCCcceeEEEEEEeC
Q 005224 371 ALATNNFNSSTQIGQGGYGKVYKGIL------PDGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE 443 (707)
Q Consensus 371 ~~~~~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~ 443 (707)
....++|.+.+.||+|+||.||+|.. .+++.||||++.... ....+.+.+|+++++.++||||+++++++.+.
T Consensus 19 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~ 98 (314)
T 2ivs_A 19 EFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQD 98 (314)
T ss_dssp BCCGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS
T ss_pred ccchhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecC
Confidence 34467899999999999999999985 245899999997643 33356789999999999999999999999999
Q ss_pred CeEEEEEecCCCCCHHHHHhhcCC----------------------CCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecC
Q 005224 444 GEQMLVYEFMSNGTLRDQLSAKSK----------------------EPLGFAMRLSIALGSSRGILYLHTEADPPVFHRD 501 (707)
Q Consensus 444 ~~~~lV~E~~~~gsL~~~l~~~~~----------------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~D 501 (707)
+..++||||+++++|.+++..... ..+++..++.++.|+++||+|||+++ |+|||
T Consensus 99 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~d 175 (314)
T 2ivs_A 99 GPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMK---LVHRD 175 (314)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTT---EECCC
T ss_pred CceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCC---Ccccc
Confidence 999999999999999999976432 34899999999999999999999999 99999
Q ss_pred CCCCCEEEcCCCcEEEeeecccccCCCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc-CC
Q 005224 502 IKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GM 580 (707)
Q Consensus 502 lkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~ellt-G~ 580 (707)
|||+||++++++.+||+|||+++....... ........+++.|+|||++.+..++.++|||||||++|||++ |+
T Consensus 176 ikp~NIli~~~~~~kl~Dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~ 250 (314)
T 2ivs_A 176 LAARNILVAEGRKMKISDFGLSRDVYEEDS-----YVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGG 250 (314)
T ss_dssp CSGGGEEEETTTEEEECCCTTCEECTTTSC-----EECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSC
T ss_pred cchheEEEcCCCCEEEcccccccccccccc-----ceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCC
Confidence 999999999999999999999986643221 111233456788999999999999999999999999999999 99
Q ss_pred CCCCCCchhHHHHHHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 005224 581 QPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 651 (707)
Q Consensus 581 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~ 651 (707)
.||.......- . ..+..+.....+..++..+.+++.+||+.+|.+||++.++++.|+.+..
T Consensus 251 ~p~~~~~~~~~-~---------~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~ 311 (314)
T 2ivs_A 251 NPYPGIPPERL-F---------NLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMV 311 (314)
T ss_dssp CSSTTCCGGGH-H---------HHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCCCCCHHHH-H---------HHhhcCCcCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 99975433111 1 1111222334556677889999999999999999999999999998765
No 99
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=5.3e-41 Score=352.90 Aligned_cols=267 Identities=25% Similarity=0.452 Sum_probs=212.0
Q ss_pred HHhcCCCccceEeeeCceEEEEEEeCCCcEEEEEEeccCC--hhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEE
Q 005224 372 LATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 449 (707)
Q Consensus 372 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV 449 (707)
...++|.+.+.||+|+||+||+|.+. ..+|+|+++... ....+.+.+|++++++++||||+++++++. .+..++|
T Consensus 33 i~~~~~~~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv 109 (307)
T 3lb7_A 33 IEASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIV 109 (307)
T ss_dssp CCTTSCCEEEEEEECSSCEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEE
T ss_pred ecccceEEEeEecCCCCeEEEEEEEC--CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-cCcEEEE
Confidence 34568999999999999999999864 358899887533 334567899999999999999999999875 4568999
Q ss_pred EecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCC
Q 005224 450 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 529 (707)
Q Consensus 450 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~ 529 (707)
|||+++++|.+++... ...+++..++.++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||+++.....
T Consensus 110 ~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~ 185 (307)
T 3lb7_A 110 TQWCEGSSLYKHLHVQ-ETKFQMFQLIDIARQTAQGMDYLHAKN---IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRW 185 (307)
T ss_dssp EECCSSCBHHHHHHTS-CCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCSSSEEECTTSCEEECCCCSSCC----
T ss_pred EecCCCCcHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhCC---EeeCCCChhhEEEcCCCCEEEccCCCceecccc
Confidence 9999999999999754 346999999999999999999999999 999999999999999999999999999865321
Q ss_pred CCCCccccceecccccCCCccchhhhc---cCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhc
Q 005224 530 DIEGIVPAHVSTVVKGTPGYLDPEYFL---THKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVI 606 (707)
Q Consensus 530 ~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~s~~sDVwS~Gvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~ 606 (707)
. .........||+.|+|||++. +..++.++|||||||++|||++|+.||............... ...
T Consensus 186 ~-----~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~-----~~~ 255 (307)
T 3lb7_A 186 S-----GSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGR-----GYA 255 (307)
T ss_dssp -------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHH-----TCC
T ss_pred c-----ccccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHHHHHHHHhc-----CCC
Confidence 1 112233456899999999996 567889999999999999999999999765543222221111 111
Q ss_pred cCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCC
Q 005224 607 DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPE 655 (707)
Q Consensus 607 ~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~ 655 (707)
.+........++..+.+++..||+.+|++||++.++++.++.+...+++
T Consensus 256 ~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~~~~pk 304 (307)
T 3lb7_A 256 SPDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSLPK 304 (307)
T ss_dssp CCCSTTSCSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHHTTCCC
T ss_pred CcchhhhhcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHHHhhccc
Confidence 2222334456678899999999999999999999999999998877664
No 100
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=9.4e-42 Score=353.22 Aligned_cols=265 Identities=28% Similarity=0.451 Sum_probs=218.3
Q ss_pred HHHHHhcCCCccceEeeeCceEEEEEEeCCCcEEEEEEeccCChhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEE
Q 005224 369 EMALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 448 (707)
Q Consensus 369 ~l~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~l 448 (707)
++....++|++.+.||+|+||+||+|..++++.||||++.... ...+.+.+|+++++.++||||+++++++. .+..++
T Consensus 7 ~~~v~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~ 84 (279)
T 1qpc_A 7 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYI 84 (279)
T ss_dssp TTBCCGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEE
T ss_pred hcccCHHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEc-CCCcEE
Confidence 3444567899999999999999999999888899999997643 34568999999999999999999999986 456899
Q ss_pred EEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCC
Q 005224 449 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 528 (707)
Q Consensus 449 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~ 528 (707)
||||+++++|.+++.......+++..++.++.|+++||+|||+.+ |+||||||+||++++++.+||+|||+++....
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 161 (279)
T 1qpc_A 85 ITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIED 161 (279)
T ss_dssp EEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred EEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHhhEEEcCCCCEEECCCcccccccC
Confidence 999999999999997543346899999999999999999999999 99999999999999999999999999987643
Q ss_pred CCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHhhcccchhhcc
Q 005224 529 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVID 607 (707)
Q Consensus 529 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 607 (707)
.. ........++..|+|||++.+..++.++|||||||++|||++ |+.||...... +.... +..
T Consensus 162 ~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~-~~~~~---------~~~ 225 (279)
T 1qpc_A 162 NE------YTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP-EVIQN---------LER 225 (279)
T ss_dssp SC------EECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHH-HHHHH---------HHT
T ss_pred cc------cccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHH-HHHHH---------Hhc
Confidence 22 112233456789999999999999999999999999999999 89999754432 11111 111
Q ss_pred CCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCC
Q 005224 608 GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMP 654 (707)
Q Consensus 608 ~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~ 654 (707)
+.....+..++..+.+++..|++.+|.+||++.++++.|+.+.....
T Consensus 226 ~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~ 272 (279)
T 1qpc_A 226 GYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATE 272 (279)
T ss_dssp TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC-
T ss_pred ccCCCCcccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHhcc
Confidence 12223445667889999999999999999999999999999876543
No 101
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=8.4e-42 Score=365.99 Aligned_cols=295 Identities=23% Similarity=0.317 Sum_probs=214.2
Q ss_pred hcCCCccceEeeeCceEEEEEEe-CCCcEEEEEEeccCChh--hHHHHHHHHHHHHccCCCcceeEEEEEEe--------
Q 005224 374 TNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQ--GEKEFLTEIQFLSRLHHRNLVSLVGYCDE-------- 442 (707)
Q Consensus 374 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~--~~~~~~~E~~~l~~l~H~nIv~l~~~~~~-------- 442 (707)
.++|++.+.||+|+||+||+|.. .+|+.||||++...... ....+.+|+++++.++||||+++++++..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 95 (351)
T 3mi9_A 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC 95 (351)
T ss_dssp GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-------
T ss_pred ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccC
Confidence 35799999999999999999997 47999999998654322 24578899999999999999999999976
Q ss_pred CCeEEEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecc
Q 005224 443 EGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGL 522 (707)
Q Consensus 443 ~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGl 522 (707)
.+..++||||+++ +|.+.+... ...+++..++.++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+
T Consensus 96 ~~~~~lv~e~~~~-~l~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~ 170 (351)
T 3mi9_A 96 KGSIYLVFDFCEH-DLAGLLSNV-LVKFTLSEIKRVMQMLLNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGL 170 (351)
T ss_dssp -CEEEEEEECCSE-EHHHHHHCT-TSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTT
T ss_pred CceEEEEEeccCC-CHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCHHHEEEcCCCCEEEccchh
Confidence 4568999999974 888877654 345999999999999999999999999 99999999999999999999999999
Q ss_pred cccCCCCCCCCccccceecccccCCCccchhhhcc-CCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhccc
Q 005224 523 SRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSM 601 (707)
Q Consensus 523 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDVwS~Gvll~elltG~~pf~~~~~~~~~~~~~~~~~~ 601 (707)
++........ .........||+.|+|||++.+ ..++.++|||||||++|||++|+.||............. .
T Consensus 171 a~~~~~~~~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~-~--- 243 (351)
T 3mi9_A 171 ARAFSLAKNS---QPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALIS-Q--- 243 (351)
T ss_dssp CEECCCCSSS---SCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHH-H---
T ss_pred cccccccccc---cccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH-H---
Confidence 9876532211 1222344578999999999986 568999999999999999999999997654322111110 0
Q ss_pred chhhccCCCCC-CChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCc
Q 005224 602 MFSVIDGNMGS-YPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSS 680 (707)
Q Consensus 602 ~~~~~~~~~~~-~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e 680 (707)
........ .+...... . ..-+......++...+.+.... .++.+.+||.+||..||++|+|++|
T Consensus 244 ---~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~li~~~L~~dP~~R~t~~e 308 (351)
T 3mi9_A 244 ---LCGSITPEVWPNVDNYE---L-YEKLELVKGQKRKVKDRLKAYV--------RDPYALDLIDKLLVLDPAQRIDSDD 308 (351)
T ss_dssp ---HHCCCCTTTSTTGGGCG---G-GTSSCCCSSCCCCHHHHHHHHH--------CCHHHHHHHHHHSCSSGGGSCCHHH
T ss_pred ---HhCCCChhhccccccch---h-hcccccccccccCHHHHhhhcc--------CChHHHHHHHHHhcCChhhCCCHHH
Confidence 00000000 00000000 0 0001111222233332222111 1334568999999999999999999
Q ss_pred CCCCCCCCCCCCCCC
Q 005224 681 MLKHPYVSSDVSGSN 695 (707)
Q Consensus 681 ~L~Hp~f~~~~~~~~ 695 (707)
+|+||||.++...+.
T Consensus 309 ~l~hp~f~~~~~~~~ 323 (351)
T 3mi9_A 309 ALNHDFFWSDPMPSD 323 (351)
T ss_dssp HHTSGGGGSSSCCCC
T ss_pred HhCCCCcCCCCCccc
Confidence 999999988776543
No 102
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=1.7e-41 Score=352.13 Aligned_cols=260 Identities=23% Similarity=0.363 Sum_probs=207.6
Q ss_pred hcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCC--hhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEE
Q 005224 374 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 450 (707)
Q Consensus 374 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~ 450 (707)
.++|++.+.||+|+||+||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++...+..++||
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 84 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 84 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEE
Confidence 468999999999999999999975 68999999986533 233467889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCc---EEEeeecccccCC
Q 005224 451 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFT---AKVADFGLSRLAP 527 (707)
Q Consensus 451 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~---~kl~DFGla~~~~ 527 (707)
||+++++|.+.+... ..+++..++.++.|++.||+|||+.+ |+||||||+||+++.++. +||+|||++....
T Consensus 85 e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~ 159 (284)
T 3kk8_A 85 DLVTGGELFEDIVAR--EFYSEADASHCIQQILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN 159 (284)
T ss_dssp CCCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEESSSSTTCCEEECCCTTCEECC
T ss_pred ecCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---cCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcc
Confidence 999999999988764 35899999999999999999999999 999999999999986655 9999999997654
Q ss_pred CCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhcc
Q 005224 528 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVID 607 (707)
Q Consensus 528 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 607 (707)
... ......||+.|+|||++.+..++.++||||||+++|||++|+.||........ ..
T Consensus 160 ~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~-~~------------- 217 (284)
T 3kk8_A 160 DSE--------AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRL-YA------------- 217 (284)
T ss_dssp SSC--------BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HH-------------
T ss_pred cCc--------cccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhHH-HH-------------
Confidence 321 22345689999999999999999999999999999999999999965433111 00
Q ss_pred CCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCCCCCCC
Q 005224 608 GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYV 687 (707)
Q Consensus 608 ~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f 687 (707)
.+...... .|... .....+...+|+.+||..||++|||++|+|+||||
T Consensus 218 ---------------~~~~~~~~-~~~~~----------------~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~ 265 (284)
T 3kk8_A 218 ---------------QIKAGAYD-YPSPE----------------WDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWI 265 (284)
T ss_dssp ---------------HHHHTCCC-CCTTT----------------TTTSCHHHHHHHHHHSCSSTTTSCCHHHHTTSHHH
T ss_pred ---------------HHHhcccc-CCchh----------------hcccCHHHHHHHHHHcccChhhCCCHHHHhcCccc
Confidence 00000010 01000 01112223468888999999999999999999999
Q ss_pred CCCCC
Q 005224 688 SSDVS 692 (707)
Q Consensus 688 ~~~~~ 692 (707)
.....
T Consensus 266 ~~~~~ 270 (284)
T 3kk8_A 266 CNRER 270 (284)
T ss_dssp HSCCC
T ss_pred cCChh
Confidence 76544
No 103
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=7e-42 Score=355.79 Aligned_cols=265 Identities=30% Similarity=0.457 Sum_probs=223.0
Q ss_pred HHHHHHhcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeE
Q 005224 368 GEMALATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQ 446 (707)
Q Consensus 368 ~~l~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~ 446 (707)
+++....++|++.+.||+|+||+||+|.+. +++.||+|++.... ...+.+.+|++++++++||||+++++++.+.+..
T Consensus 6 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 84 (288)
T 3kfa_A 6 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPF 84 (288)
T ss_dssp CTTBCCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS-THHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSE
T ss_pred hcccccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH-HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCE
Confidence 344556778999999999999999999976 58899999997643 3456889999999999999999999999999999
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccC
Q 005224 447 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 526 (707)
Q Consensus 447 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~ 526 (707)
++||||+++++|.+++.......+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++...
T Consensus 85 ~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~ 161 (288)
T 3kfa_A 85 YIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLM 161 (288)
T ss_dssp EEEEECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHT---CCCSCCSGGGEEECGGGCEEECCCCGGGTS
T ss_pred EEEEEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHCC---ccCCCCCcceEEEcCCCCEEEccCccceec
Confidence 99999999999999998877778999999999999999999999999 999999999999999999999999999876
Q ss_pred CCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHhhcccchhh
Q 005224 527 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSV 605 (707)
Q Consensus 527 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~ 605 (707)
.... ........+|+.|+|||++.+..++.++||||||+++|||++ |..||....... ... .+
T Consensus 162 ~~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~-~~~---------~~ 225 (288)
T 3kfa_A 162 TGDT------YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-VYE---------LL 225 (288)
T ss_dssp CSSS------SEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG-HHH---------HH
T ss_pred cCCc------cccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH-HHH---------HH
Confidence 5322 223344557889999999999999999999999999999999 999986543211 111 11
Q ss_pred ccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhc
Q 005224 606 IDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNM 652 (707)
Q Consensus 606 ~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~ 652 (707)
........+..++..+.+++..|++.+|.+||++.++++.|+.+...
T Consensus 226 ~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~~ 272 (288)
T 3kfa_A 226 EKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE 272 (288)
T ss_dssp HTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred hccCCCCCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHHh
Confidence 11122334556678899999999999999999999999999887653
No 104
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=1.1e-41 Score=353.16 Aligned_cols=259 Identities=27% Similarity=0.423 Sum_probs=203.9
Q ss_pred HHhcCCCccceEeeeCceEEEEEEeC----CCcEEEEEEeccCC-hhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeE
Q 005224 372 LATNNFNSSTQIGQGGYGKVYKGILP----DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQ 446 (707)
Q Consensus 372 ~~~~~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~ 446 (707)
...++|++.+.||+|+||+||+|... .+..||+|++.... ....+.+.+|+.++++++||||+++++++. ++..
T Consensus 12 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~ 90 (281)
T 1mp8_A 12 IQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPV 90 (281)
T ss_dssp CCGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSC
T ss_pred EehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCcc
Confidence 34568999999999999999999964 25679999987643 333567899999999999999999999984 5678
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccC
Q 005224 447 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 526 (707)
Q Consensus 447 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~ 526 (707)
++||||+++++|.+++... ...+++..++.++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 91 ~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 166 (281)
T 1mp8_A 91 WIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYM 166 (281)
T ss_dssp EEEEECCTTEEHHHHHHHT-TTTSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECC-------
T ss_pred EEEEecCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCC---eecccccHHHEEECCCCCEEECcccccccc
Confidence 9999999999999999764 345899999999999999999999998 999999999999999999999999999876
Q ss_pred CCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHhhcccchhh
Q 005224 527 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSV 605 (707)
Q Consensus 527 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~ 605 (707)
.... ........+++.|+|||++.+..++.++|||||||++|||++ |..||........ ...+
T Consensus 167 ~~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~----------~~~i 230 (281)
T 1mp8_A 167 EDST------YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDV----------IGRI 230 (281)
T ss_dssp ------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGH----------HHHH
T ss_pred Cccc------ccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHH----------HHHH
Confidence 4322 111223456788999999999999999999999999999997 9999975443211 1112
Q ss_pred ccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 005224 606 IDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 651 (707)
Q Consensus 606 ~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~ 651 (707)
........+..++..+.+++.+|++.+|.+||++.++++.|+.+..
T Consensus 231 ~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~ 276 (281)
T 1mp8_A 231 ENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILE 276 (281)
T ss_dssp HTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HcCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 2223334556677889999999999999999999999999998765
No 105
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=6.5e-42 Score=369.01 Aligned_cols=278 Identities=22% Similarity=0.364 Sum_probs=205.7
Q ss_pred hcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccC--ChhhHHHHHHHHHHHHccCCCcceeEEEEEEeC------C
Q 005224 374 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEG--SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE------G 444 (707)
Q Consensus 374 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~------~ 444 (707)
.++|+..+.||+|+||.||+|... +|+.||||++... .....+.+.+|+++++.++||||+++++++... .
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 103 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT 103 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence 467899999999999999999974 7999999998653 223356789999999999999999999999765 3
Q ss_pred eEEEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccc
Q 005224 445 EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSR 524 (707)
Q Consensus 445 ~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~ 524 (707)
..++||||+ +++|.+++.. ..+++..+..++.||++||+|||+.+ |+||||||+|||++.++.+||+|||+++
T Consensus 104 ~~~lv~e~~-~~~L~~~~~~---~~l~~~~~~~~~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 176 (367)
T 1cm8_A 104 DFYLVMPFM-GTDLGKLMKH---EKLGEDRIQFLVYQMLKGLRYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLAR 176 (367)
T ss_dssp CCEEEEECC-SEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred eEEEEEecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCcCHHHEEEcCCCCEEEEeeeccc
Confidence 469999999 8899999975 35899999999999999999999999 9999999999999999999999999998
Q ss_pred cCCCCCCCCccccceecccccCCCccchhhhcc-CCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccch
Q 005224 525 LAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMF 603 (707)
Q Consensus 525 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDVwS~Gvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~ 603 (707)
..... .....||+.|+|||++.+ ..++.++||||+||++|||++|+.||...... +.+......
T Consensus 177 ~~~~~----------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-~~l~~i~~~---- 241 (367)
T 1cm8_A 177 QADSE----------MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHL-DQLKEIMKV---- 241 (367)
T ss_dssp ECCSS----------CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHH----
T ss_pred ccccc----------cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHh----
Confidence 65321 234568999999999987 78999999999999999999999999755432 222211110
Q ss_pred hhccCCCCCCChHHHHH-----HHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCC
Q 005224 604 SVIDGNMGSYPSECVEK-----FIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSS 678 (707)
Q Consensus 604 ~~~~~~~~~~~~~~~~~-----l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa 678 (707)
.+..+.+.... ....+... ...+ +.. +...++..++.+.+||.+||+.||++|+|+
T Consensus 242 ------~g~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~----------~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~ 302 (367)
T 1cm8_A 242 ------TGTPPAEFVQRLQSDEAKNYMKGL-PELE--KKD----------FASILTNASPLAVNLLEKMLVLDAEQRVTA 302 (367)
T ss_dssp ------HCCCCHHHHHTCSCHHHHHHHHHS-CCCC--CCC----------GGGTCTTCCHHHHHHHHHHSCSSTTTSCCH
T ss_pred ------cCCCCHHHHHHhhhHHHHHHHHhC-CCCC--CCC----------HHHHCCCCCHHHHHHHHHHccCChhHCCCH
Confidence 01112211111 01111110 0000 001 111233445566789999999999999999
Q ss_pred CcCCCCCCCCCCCC
Q 005224 679 SSMLKHPYVSSDVS 692 (707)
Q Consensus 679 ~e~L~Hp~f~~~~~ 692 (707)
+|+|+||||.....
T Consensus 303 ~e~l~hp~f~~~~~ 316 (367)
T 1cm8_A 303 GEALAHPYFESLHD 316 (367)
T ss_dssp HHHHHSGGGTTTC-
T ss_pred HHHhcChHHHhhcC
Confidence 99999999986543
No 106
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=1.3e-41 Score=349.46 Aligned_cols=258 Identities=29% Similarity=0.480 Sum_probs=216.1
Q ss_pred HhcCCCccceEeeeCceEEEEEEeCCCcEEEEEEeccCChhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEec
Q 005224 373 ATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 452 (707)
Q Consensus 373 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E~ 452 (707)
..++|+..+.||+|+||.||+|...+++.||+|++..... ..+.+.+|+++++.++||||+++++++.+.+..++||||
T Consensus 6 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (267)
T 3t9t_A 6 DPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEF 84 (267)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECC
T ss_pred chhheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeC
Confidence 3467889999999999999999998889999999986443 346899999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCC
Q 005224 453 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 532 (707)
Q Consensus 453 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 532 (707)
+++++|.+++... ...+++..++.++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 85 ~~~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~-- 158 (267)
T 3t9t_A 85 MEHGCLSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ-- 158 (267)
T ss_dssp CTTCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHH--
T ss_pred CCCCcHHHHHhhC-cccCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCchheEEECCCCCEEEccccccccccccc--
Confidence 9999999999764 345899999999999999999999999 9999999999999999999999999998653211
Q ss_pred CccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHhhcccchhhccCCCC
Q 005224 533 GIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 611 (707)
Q Consensus 533 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 611 (707)
........++..|+|||++.+..++.++||||||+++|||++ |+.||...... ..... +..+...
T Consensus 159 ----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~-~~~~~---------i~~~~~~ 224 (267)
T 3t9t_A 159 ----YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS-EVVED---------ISTGFRL 224 (267)
T ss_dssp ----HHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-HHHHH---------HHTTCCC
T ss_pred ----ccccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHH-HHHHH---------HhcCCcC
Confidence 111223456788999999999999999999999999999999 89999754432 11111 1112222
Q ss_pred CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 005224 612 SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 651 (707)
Q Consensus 612 ~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~ 651 (707)
..+..++..+.+++.+||+.+|.+||++.++++.|+++..
T Consensus 225 ~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~ 264 (267)
T 3t9t_A 225 YKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE 264 (267)
T ss_dssp CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 3344566789999999999999999999999999998865
No 107
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=1.2e-41 Score=360.31 Aligned_cols=266 Identities=28% Similarity=0.417 Sum_probs=202.9
Q ss_pred HHHHHhcCCCccceEeeeCceEEEEEEeCC-Cc---EEEEEEeccC--ChhhHHHHHHHHHHHHccCCCcceeEEEEEEe
Q 005224 369 EMALATNNFNSSTQIGQGGYGKVYKGILPD-GT---VVAVKRAQEG--SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE 442 (707)
Q Consensus 369 ~l~~~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~---~vavK~l~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~ 442 (707)
++....++|++.+.||+|+||+||+|.... +. .||||++... .....+.+.+|++++++++||||+++++++..
T Consensus 17 ~~~i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 96 (323)
T 3qup_A 17 DVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLR 96 (323)
T ss_dssp TTBCC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEEC
T ss_pred hcccChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeec
Confidence 444556789999999999999999999653 32 7999998764 23345789999999999999999999999987
Q ss_pred CCeE------EEEEecCCCCCHHHHHhhcC----CCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCC
Q 005224 443 EGEQ------MLVYEFMSNGTLRDQLSAKS----KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHK 512 (707)
Q Consensus 443 ~~~~------~lV~E~~~~gsL~~~l~~~~----~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~ 512 (707)
.... ++||||+++|+|.+++.... ...+++..++.++.|+++||+|||+.+ |+||||||+|||++++
T Consensus 97 ~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~---ivH~Dikp~NIli~~~ 173 (323)
T 3qup_A 97 SRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRN---FIHRDLAARNCMLAED 173 (323)
T ss_dssp C-------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTT
T ss_pred cccccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCC---cccCCCCcceEEEcCC
Confidence 7655 99999999999999996532 235899999999999999999999999 9999999999999999
Q ss_pred CcEEEeeecccccCCCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc-CCCCCCCCchhHH
Q 005224 513 FTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVR 591 (707)
Q Consensus 513 ~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~ellt-G~~pf~~~~~~~~ 591 (707)
+.+||+|||+++....... ........+++.|+|||++.+..++.++|||||||++|||++ |+.||........
T Consensus 174 ~~~kl~Dfg~a~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~ 248 (323)
T 3qup_A 174 MTVCVADFGLSRKIYSGDY-----YRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEI 248 (323)
T ss_dssp SCEEECCCCC----------------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGH
T ss_pred CCEEEeecccccccccccc-----ccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHHH
Confidence 9999999999986543221 112233456788999999999999999999999999999999 8999975443211
Q ss_pred HHHHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhc
Q 005224 592 EVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNM 652 (707)
Q Consensus 592 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~ 652 (707)
...+..+.....+..++..+.+++.+|++.+|.+||++.++++.|+++...
T Consensus 249 ----------~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~ 299 (323)
T 3qup_A 249 ----------YNYLIGGNRLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGH 299 (323)
T ss_dssp ----------HHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred ----------HHHHhcCCCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 111222333345566778899999999999999999999999999987653
No 108
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=1.1e-41 Score=361.60 Aligned_cols=273 Identities=22% Similarity=0.315 Sum_probs=213.6
Q ss_pred cccHHHHHHHhcCCCcc-ceEeeeCceEEEEEEeC-CCcEEEEEEeccCC--hhhHHHHHHHHHHHHcc-CCCcceeEEE
Q 005224 364 SFTYGEMALATNNFNSS-TQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRL-HHRNLVSLVG 438 (707)
Q Consensus 364 ~~~~~~l~~~~~~~~~~-~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l-~H~nIv~l~~ 438 (707)
.+.+.......++|.+. +.||+|+||+||+|... +++.||||++.... ......+.+|+.+++.+ +||||+++++
T Consensus 17 n~~~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~ 96 (327)
T 3lm5_A 17 NLYFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHE 96 (327)
T ss_dssp CCCSBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEE
T ss_pred hhHHHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEE
Confidence 34455566667788887 89999999999999975 68999999987533 23357889999999999 4699999999
Q ss_pred EEEeCCeEEEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcC---CCcE
Q 005224 439 YCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDH---KFTA 515 (707)
Q Consensus 439 ~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~---~~~~ 515 (707)
++...+..++||||+++|+|.+++.......+++..++.++.|++.||+|||+.+ |+||||||+|||++. ++.+
T Consensus 97 ~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~g---ivH~Dikp~NIl~~~~~~~~~~ 173 (327)
T 3lm5_A 97 VYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNN---IVHLDLKPQNILLSSIYPLGDI 173 (327)
T ss_dssp EEECSSEEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEESCBTTBCCE
T ss_pred EEEeCCeEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC---eecCcCChHHEEEecCCCCCcE
Confidence 9999999999999999999999997665667999999999999999999999999 999999999999998 7899
Q ss_pred EEeeecccccCCCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHH
Q 005224 516 KVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNI 595 (707)
Q Consensus 516 kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~elltG~~pf~~~~~~~~~~~~ 595 (707)
||+|||+++...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...........
T Consensus 174 kL~Dfg~a~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~- 244 (327)
T 3lm5_A 174 KIVDFGMSRKIGHAC--------ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLN- 244 (327)
T ss_dssp EECCGGGCEEC-----------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH-
T ss_pred EEeeCccccccCCcc--------ccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHH-
Confidence 999999998764321 22345689999999999999999999999999999999999999965443211110
Q ss_pred HhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCC
Q 005224 596 AYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETP 675 (707)
Q Consensus 596 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R 675 (707)
+........+.. .........+||.+||..||++|
T Consensus 245 ----------------------------i~~~~~~~~~~~-----------------~~~~~~~~~~li~~~L~~dP~~R 279 (327)
T 3lm5_A 245 ----------------------------ISQVNVDYSEET-----------------FSSVSQLATDFIQSLLVKNPEKR 279 (327)
T ss_dssp ----------------------------HHHTCCCCCTTT-----------------TTTSCHHHHHHHHHHSCSSGGGS
T ss_pred ----------------------------HHhcccccCchh-----------------hcccCHHHHHHHHHHcCCChhhC
Confidence 000000000000 01112223468888999999999
Q ss_pred CCCCcCCCCCCCCCCCCC
Q 005224 676 PSSSSMLKHPYVSSDVSG 693 (707)
Q Consensus 676 ~sa~e~L~Hp~f~~~~~~ 693 (707)
||++|+|+||||....+.
T Consensus 280 pt~~~ll~h~~~~~~~~~ 297 (327)
T 3lm5_A 280 PTAEICLSHSWLQQWDFE 297 (327)
T ss_dssp CCHHHHTTCGGGCCCCTT
T ss_pred cCHHHHhCCHhhcccccc
Confidence 999999999999876554
No 109
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=7e-42 Score=368.81 Aligned_cols=261 Identities=26% Similarity=0.428 Sum_probs=214.2
Q ss_pred hcCCCccceEeeeCceEEEEEEeC------CCcEEEEEEeccCC-hhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeE
Q 005224 374 TNNFNSSTQIGQGGYGKVYKGILP------DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQ 446 (707)
Q Consensus 374 ~~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~ 446 (707)
.++|++.+.||+|+||+||+|.+. +++.||||++.... ......+.+|+.++++++||||+++++++...+..
T Consensus 70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~ 149 (367)
T 3l9p_A 70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 149 (367)
T ss_dssp GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence 457888999999999999999953 46789999997543 34456789999999999999999999999999999
Q ss_pred EEEEecCCCCCHHHHHhhcC-----CCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCC---cEEEe
Q 005224 447 MLVYEFMSNGTLRDQLSAKS-----KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKF---TAKVA 518 (707)
Q Consensus 447 ~lV~E~~~~gsL~~~l~~~~-----~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~---~~kl~ 518 (707)
++||||+++|+|.+++.... ...+++..++.++.||++||+|||+.+ |+||||||+|||++.++ .+||+
T Consensus 150 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~~~~kL~ 226 (367)
T 3l9p_A 150 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIG 226 (367)
T ss_dssp EEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred EEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChhhEEEecCCCCceEEEC
Confidence 99999999999999997643 245899999999999999999999999 99999999999999555 59999
Q ss_pred eecccccCCCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHh
Q 005224 519 DFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAY 597 (707)
Q Consensus 519 DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~ellt-G~~pf~~~~~~~~~~~~~~ 597 (707)
|||+++....... ........||+.|+|||++.+..++.++|||||||++|||++ |..||...... +...
T Consensus 227 DFG~a~~~~~~~~-----~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~-~~~~--- 297 (367)
T 3l9p_A 227 DFGMARDIYRAGY-----YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ-EVLE--- 297 (367)
T ss_dssp CCHHHHHHHHHSS-----CTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH-HHHH---
T ss_pred CCccccccccccc-----cccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH-HHHH---
Confidence 9999975422110 112234457899999999999999999999999999999998 99999754432 1111
Q ss_pred hcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhc
Q 005224 598 QSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNM 652 (707)
Q Consensus 598 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~ 652 (707)
.+..+.....+..++..+.+++.+||+.+|.+||++.++++.|+.+...
T Consensus 298 ------~i~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~ 346 (367)
T 3l9p_A 298 ------FVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 346 (367)
T ss_dssp ------HHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred ------HHHcCCCCCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhC
Confidence 1122223344566778899999999999999999999999999887653
No 110
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=6.3e-41 Score=356.07 Aligned_cols=272 Identities=17% Similarity=0.233 Sum_probs=216.0
Q ss_pred hcCCCccceEeeeCceEEEEEEe-CCCcEEEEEEeccCChhhHHHHHHHHHHHHcc-CCCcceeEEEEEEeCCeEEEEEe
Q 005224 374 TNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQMLVYE 451 (707)
Q Consensus 374 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lV~E 451 (707)
.++|++.+.||+|+||+||+|.. .+++.||||++..... .+.+.+|+++++.+ +||||+++++++...+..++|||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e 85 (330)
T 2izr_A 8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR--APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLE 85 (330)
T ss_dssp TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS--SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEE
T ss_pred cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc--hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEE
Confidence 36789999999999999999996 4799999999875432 24688999999999 99999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCc-----EEEeeecccccC
Q 005224 452 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFT-----AKVADFGLSRLA 526 (707)
Q Consensus 452 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~-----~kl~DFGla~~~ 526 (707)
|+ +++|.+++... ...+++..++.++.|++.||+|||+.+ |+||||||+|||++.++. +||+|||+++..
T Consensus 86 ~~-~~~L~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~~---iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~ 160 (330)
T 2izr_A 86 LL-GPSLEDLFDLC-DRTFSLKTVLMIAIQLISRMEYVHSKN---LIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEY 160 (330)
T ss_dssp CC-CCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECCGGGTCTTSEEECCCTTCEES
T ss_pred eC-CCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeeeccCCCCCCceEEEEEcccceee
Confidence 99 99999999764 346999999999999999999999998 999999999999998887 999999999876
Q ss_pred CCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCc--hhHHHHHHHhhcccchh
Q 005224 527 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK--NIVREVNIAYQSSMMFS 604 (707)
Q Consensus 527 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~elltG~~pf~~~~--~~~~~~~~~~~~~~~~~ 604 (707)
.........+........||+.|+|||++.+..++.++|||||||++|||++|+.||.... ...+.......... ..
T Consensus 161 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~-~~ 239 (330)
T 2izr_A 161 IDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKR-AT 239 (330)
T ss_dssp BCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHH-HS
T ss_pred ecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhc-cC
Confidence 4433221111222345679999999999999999999999999999999999999997532 22221111110000 00
Q ss_pred hccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCC
Q 005224 605 VIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDT 658 (707)
Q Consensus 605 ~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~ 658 (707)
........++ ++.+++..||+.+|.+||++.++.+.|+++.........
T Consensus 240 ----~~~~~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~~~~~~~ 288 (330)
T 2izr_A 240 ----PIEVLCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRKGYMFD 288 (330)
T ss_dssp ----CHHHHTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTTCCCS
T ss_pred ----CHHHHhccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHcCCCCC
Confidence 0000011234 899999999999999999999999999988876654433
No 111
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=2.3e-41 Score=364.53 Aligned_cols=282 Identities=18% Similarity=0.201 Sum_probs=214.5
Q ss_pred HhcCCCccceEeeeCceEEEEEEeCC------CcEEEEEEeccCChhhH-----------HHHHHHHHHHHccCCCccee
Q 005224 373 ATNNFNSSTQIGQGGYGKVYKGILPD------GTVVAVKRAQEGSLQGE-----------KEFLTEIQFLSRLHHRNLVS 435 (707)
Q Consensus 373 ~~~~~~~~~~lG~G~~g~Vy~~~~~~------~~~vavK~l~~~~~~~~-----------~~~~~E~~~l~~l~H~nIv~ 435 (707)
..++|++.+.||+|+||+||+|.+++ ++.||||++........ ..+..|+..++.++|+||++
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~ 112 (364)
T 3op5_A 33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPK 112 (364)
T ss_dssp TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCC
T ss_pred CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCe
Confidence 35689999999999999999999754 47899999876542211 12445666778889999999
Q ss_pred EEEEEEeC----CeEEEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEc-
Q 005224 436 LVGYCDEE----GEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLD- 510 (707)
Q Consensus 436 l~~~~~~~----~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~- 510 (707)
+++++... ...++||||+ +++|.+++... ...+++..++.++.||+.||+|||+.+ |+||||||+|||++
T Consensus 113 ~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~-~~~l~~~~~~~i~~qi~~~l~~lH~~~---iiHrDlkp~Nill~~ 187 (364)
T 3op5_A 113 YWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEAN-AKRFSRKTVLQLSLRILDILEYIHEHE---YVHGDIKASNLLLNY 187 (364)
T ss_dssp EEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHT-TSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEES
T ss_pred EEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEEecCCHHHEEEec
Confidence 99998664 4589999999 99999999764 346999999999999999999999998 99999999999999
Q ss_pred -CCCcEEEeeecccccCCCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchh
Q 005224 511 -HKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNI 589 (707)
Q Consensus 511 -~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~elltG~~pf~~~~~~ 589 (707)
.++.+||+|||+++....................||+.|+|||++.+..++.++|||||||++|||++|+.||......
T Consensus 188 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~ 267 (364)
T 3op5_A 188 KNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKD 267 (364)
T ss_dssp SCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTC
T ss_pred CCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccC
Confidence 8899999999999876533221111112223456999999999999999999999999999999999999999743222
Q ss_pred HHHH---HHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCc
Q 005224 590 VREV---NIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPE 662 (707)
Q Consensus 590 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~d 662 (707)
.... ..... .....+++..+. ...++.++.+++..||+.+|.+||++.++++.|+.+............|
T Consensus 268 ~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~~~~~~~~~~d 340 (364)
T 3op5_A 268 PKYVRDSKIRYR-ENIASLMDKCFP--AANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKAIGSKDDGKLD 340 (364)
T ss_dssp HHHHHHHHHHHH-HCHHHHHHHHSC--TTCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTCCCCCCCC
T ss_pred HHHHHHHHHHhh-hhHHHHHHHhcc--cccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcCCCcCCccc
Confidence 1111 11111 112222221111 1234577899999999999999999999999999998866554444333
No 112
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=2.5e-41 Score=347.94 Aligned_cols=255 Identities=20% Similarity=0.351 Sum_probs=212.6
Q ss_pred hcCCCccceEeeeCceEEEEEEeCCCcEEEEEEeccCC--hhhHHHHHHHHHHHHccCCCcceeEEEEEEeC--CeEEEE
Q 005224 374 TNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE--GEQMLV 449 (707)
Q Consensus 374 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~--~~~~lV 449 (707)
.++|+..+.||+|+||+||+|.++ ++.||||++.... ....+.+.+|+.++++++||||+++++++.+. +..++|
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 87 (271)
T 3kmu_A 9 FKQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLI 87 (271)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEE
T ss_pred HHHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEee
Confidence 357889999999999999999984 8899999997643 33456799999999999999999999999877 788999
Q ss_pred EecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCC
Q 005224 450 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 529 (707)
Q Consensus 450 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~ 529 (707)
|||+++|+|.+++.......+++..++.++.|+++||+|||+.+ ++|+||||||+||++++++.++|+|||++.....
T Consensus 88 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~~- 165 (271)
T 3kmu_A 88 THWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLE-PLIPRHALNSRSVMIDEDMTARISMADVKFSFQS- 165 (271)
T ss_dssp EECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTSS-SCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTSC-
T ss_pred ecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCC-CceecCCCccceEEEcCCcceeEEeccceeeecc-
Confidence 99999999999998766667999999999999999999999865 4599999999999999999999999998754321
Q ss_pred CCCCccccceecccccCCCccchhhhccCCCCC---chhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhc
Q 005224 530 DIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTD---KSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVI 606 (707)
Q Consensus 530 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~---~sDVwS~Gvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~ 606 (707)
....||+.|+|||++.+..++. ++|||||||++|||++|+.||............ ..
T Consensus 166 -----------~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~---------~~ 225 (271)
T 3kmu_A 166 -----------PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKV---------AL 225 (271)
T ss_dssp -----------TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHHHHH---------HH
T ss_pred -----------cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHHHHH---------Hh
Confidence 2345789999999998765554 799999999999999999999765442221111 11
Q ss_pred cCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 005224 607 DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 651 (707)
Q Consensus 607 ~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~ 651 (707)
.......+..++..+.+++..||+.+|.+||++.++++.|+.+.+
T Consensus 226 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~ 270 (271)
T 3kmu_A 226 EGLRPTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD 270 (271)
T ss_dssp SCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred cCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 222334556677889999999999999999999999999988753
No 113
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=6.8e-41 Score=350.01 Aligned_cols=273 Identities=18% Similarity=0.256 Sum_probs=217.8
Q ss_pred hcCCCccceEeeeCceEEEEEEe-CCCcEEEEEEeccCChhhHHHHHHHHHHHHcc-CCCcceeEEEEEEeCCeEEEEEe
Q 005224 374 TNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQMLVYE 451 (707)
Q Consensus 374 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lV~E 451 (707)
.++|++.+.||+|+||+||+|.. .+++.||||++.... ..+.+.+|+++++.+ +|+|++++++++......++|||
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e 86 (298)
T 1csn_A 9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVID 86 (298)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEE
Confidence 46799999999999999999996 579999999986533 234678899999999 79999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCc-----EEEeeecccccC
Q 005224 452 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFT-----AKVADFGLSRLA 526 (707)
Q Consensus 452 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~-----~kl~DFGla~~~ 526 (707)
|+ +++|.+++.... ..+++..++.++.|++.||+|||+.+ |+||||||+||+++.++. +||+|||+++..
T Consensus 87 ~~-~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~ 161 (298)
T 1csn_A 87 LL-GPSLEDLLDLCG-RKFSVKTVAMAAKQMLARVQSIHEKS---LVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFY 161 (298)
T ss_dssp CC-CCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEECCSSSTTTTCEEECCCTTCEES
T ss_pred ec-CCCHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEeccCCCCCCCeEEEEECcccccc
Confidence 99 999999997643 45999999999999999999999998 999999999999987776 999999999876
Q ss_pred CCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCch--hHHHHHHHhhcccchh
Q 005224 527 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKN--IVREVNIAYQSSMMFS 604 (707)
Q Consensus 527 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~elltG~~pf~~~~~--~~~~~~~~~~~~~~~~ 604 (707)
.........+........||+.|+|||++.+..++.++|||||||++|||++|+.||..... ............
T Consensus 162 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~---- 237 (298)
T 1csn_A 162 RDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKK---- 237 (298)
T ss_dssp BCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHH----
T ss_pred ccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhc----
Confidence 54332221112234456799999999999999999999999999999999999999975322 111111110000
Q ss_pred hccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCC
Q 005224 605 VIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDT 658 (707)
Q Consensus 605 ~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~ 658 (707)
...........++..+.+++..||+.+|.+||++.++++.|+++.........
T Consensus 238 -~~~~~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~~~~~~~ 290 (298)
T 1csn_A 238 -QSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLNTTED 290 (298)
T ss_dssp -HHSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTTCCSC
T ss_pred -cCccHHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhcCCCCC
Confidence 00000011223457899999999999999999999999999999876654443
No 114
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=3e-41 Score=347.80 Aligned_cols=253 Identities=32% Similarity=0.513 Sum_probs=201.8
Q ss_pred hcCCCccceEeeeCceEEEEEEeCCCcEEEEEEeccCChh----hHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEE
Q 005224 374 TNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQ----GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 449 (707)
Q Consensus 374 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~----~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV 449 (707)
.++|+..+.||+|+||+||+|.+. ++.||||++...... ..+.+.+|+++++.++||||+++++++...+..++|
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (271)
T 3dtc_A 6 FAELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLV 84 (271)
T ss_dssp TTSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEE
T ss_pred hhheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEE
Confidence 467889999999999999999984 889999998753322 246789999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcC--------CCcEEEeeec
Q 005224 450 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDH--------KFTAKVADFG 521 (707)
Q Consensus 450 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~--------~~~~kl~DFG 521 (707)
|||+++++|.+++.. ..+++..++.++.|+++||+|||+.+..+|+||||||+||+++. ++.+||+|||
T Consensus 85 ~e~~~~~~L~~~~~~---~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg 161 (271)
T 3dtc_A 85 MEFARGGPLNRVLSG---KRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFG 161 (271)
T ss_dssp EECCTTEEHHHHHTS---SCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCC
T ss_pred EEcCCCCCHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCC
Confidence 999999999999853 35899999999999999999999988666899999999999986 7789999999
Q ss_pred ccccCCCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhccc
Q 005224 522 LSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSM 601 (707)
Q Consensus 522 la~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~elltG~~pf~~~~~~~~~~~~~~~~~~ 601 (707)
+++..... ......||+.|+|||++.+..++.++||||||+++|||++|+.||.............
T Consensus 162 ~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~----- 227 (271)
T 3dtc_A 162 LAREWHRT---------TKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVA----- 227 (271)
T ss_dssp C----------------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHH-----
T ss_pred cccccccc---------cccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHhhh-----
Confidence 99765422 1224468999999999999999999999999999999999999997654422211111
Q ss_pred chhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 005224 602 MFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELES 648 (707)
Q Consensus 602 ~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~ 648 (707)
........+..++..+.+++.+||+.+|.+||++.++++.|++
T Consensus 228 ----~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~ 270 (271)
T 3dtc_A 228 ----MNKLALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTT 270 (271)
T ss_dssp ----TSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC
T ss_pred ----cCCCCCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhc
Confidence 1112233456667889999999999999999999999999875
No 115
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=2.9e-42 Score=368.45 Aligned_cols=272 Identities=23% Similarity=0.312 Sum_probs=204.9
Q ss_pred HHHHHhcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccC-----ChhhHHHHHHHHHHHHccCCCcceeEEEEEEe
Q 005224 369 EMALATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEG-----SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE 442 (707)
Q Consensus 369 ~l~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~-----~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~ 442 (707)
++....++|++.+.||+|+||+||+|... +++.||+|++... .....+.+.+|++++++++||||+++++++.+
T Consensus 20 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~ 99 (345)
T 3hko_A 20 SLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYED 99 (345)
T ss_dssp CHHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred hhhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhcc
Confidence 45667789999999999999999999974 7889999998643 22345678999999999999999999999999
Q ss_pred CCeEEEEEecCCCCCHHHHHhhc--------------------------------------CCCCcCHHHHHHHHHHHHH
Q 005224 443 EGEQMLVYEFMSNGTLRDQLSAK--------------------------------------SKEPLGFAMRLSIALGSSR 484 (707)
Q Consensus 443 ~~~~~lV~E~~~~gsL~~~l~~~--------------------------------------~~~~l~~~~~~~i~~~ia~ 484 (707)
.+..++||||+++|+|.+++... ....+++..++.++.|+++
T Consensus 100 ~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~ 179 (345)
T 3hko_A 100 EQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFS 179 (345)
T ss_dssp SSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHH
Confidence 99999999999999999998521 0112467788999999999
Q ss_pred HHHHHHhCCCCCeEecCCCCCCEEEcCCC--cEEEeeecccccCCCCCCCCccccceecccccCCCccchhhhcc--CCC
Q 005224 485 GILYLHTEADPPVFHRDIKASNILLDHKF--TAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT--HKL 560 (707)
Q Consensus 485 gL~yLH~~~~~~ivH~Dlkp~NILl~~~~--~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~ 560 (707)
||+|||+.+ |+||||||+|||++.++ .+||+|||+++........ .........||+.|+|||++.+ ..+
T Consensus 180 ~l~~LH~~~---ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~ 253 (345)
T 3hko_A 180 ALHYLHNQG---ICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNG---EYYGMTTKAGTPYFVAPEVLNTTNESY 253 (345)
T ss_dssp HHHHHHHTT---EECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC-----------CCCGGGCCHHHHTCSSSCC
T ss_pred HHHHHHHCC---ccccCCChhhEEEecCCCceEEEeeccccccccccCcc---ccccccccCCCccccCchhhccCCCCC
Confidence 999999998 99999999999998776 8999999999865322111 0112344568999999999975 678
Q ss_pred CCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHH
Q 005224 561 TDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMS 640 (707)
Q Consensus 561 s~~sDVwS~Gvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~ 640 (707)
+.++|||||||++|||++|+.||........ ...... ... ....|..
T Consensus 254 ~~~~DiwslG~il~el~~g~~pf~~~~~~~~-~~~~~~---------~~~----------------------~~~~~~~- 300 (345)
T 3hko_A 254 GPKCDAWSAGVLLHLLLMGAVPFPGVNDADT-ISQVLN---------KKL----------------------CFENPNY- 300 (345)
T ss_dssp CTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHH---------CCC----------------------CTTSGGG-
T ss_pred CcHHHHHHHHHHHHHHHHCCCCCCCCChHHH-HHHHHh---------ccc----------------------ccCCccc-
Confidence 9999999999999999999999975443211 111000 000 0000000
Q ss_pred HHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCCCCCCCCCCCC
Q 005224 641 EVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSSDVS 692 (707)
Q Consensus 641 ~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f~~~~~ 692 (707)
...++...+||.+||..||++|||++|+|+||||+....
T Consensus 301 -------------~~~~~~~~~li~~~l~~~p~~Rps~~~~l~hp~~~~~~~ 339 (345)
T 3hko_A 301 -------------NVLSPLARDLLSNLLNRNVDERFDAMRALQHPWISQFSD 339 (345)
T ss_dssp -------------GGSCHHHHHHHHHHSCSCTTTSCCHHHHHHSHHHHTTSS
T ss_pred -------------ccCCHHHHHHHHHHcCCChhHCCCHHHHhcChhhccChH
Confidence 011223346778888888888889999999999876543
No 116
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=7e-42 Score=357.81 Aligned_cols=286 Identities=27% Similarity=0.413 Sum_probs=211.6
Q ss_pred cCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCChh--hHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEe
Q 005224 375 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ--GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 451 (707)
Q Consensus 375 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~--~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E 451 (707)
++|+..+.||+|+||+||+|... +|+.||||++...... ..+.+.+|++++++++||||+++++++...+..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 82 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEE
Confidence 57899999999999999999975 7899999998754322 23678899999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCC
Q 005224 452 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 531 (707)
Q Consensus 452 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 531 (707)
|++ ++|.+++.......+++..++.++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 83 ~~~-~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~- 157 (299)
T 2r3i_A 83 FLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV- 157 (299)
T ss_dssp CCS-EEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECSTTHHHHHCCCS-
T ss_pred ccc-CCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCCHHHeEEcCCCCEEECcchhhhhccCCc-
Confidence 997 69999998776667999999999999999999999999 9999999999999999999999999997654321
Q ss_pred CCccccceecccccCCCccchhhhccCC-CCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCCC
Q 005224 532 EGIVPAHVSTVVKGTPGYLDPEYFLTHK-LTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 610 (707)
Q Consensus 532 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~s~~sDVwS~Gvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 610 (707)
.......||+.|+|||++.+.. ++.++|||||||++|||++|+.||.......................
T Consensus 158 ------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~---- 227 (299)
T 2r3i_A 158 ------RTYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV---- 227 (299)
T ss_dssp ------BCTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTT----
T ss_pred ------cccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCchhh----
Confidence 1223346799999999998765 79999999999999999999999976544222111110000000000
Q ss_pred CCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCCCCCCCCCC
Q 005224 611 GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSSD 690 (707)
Q Consensus 611 ~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f~~~ 690 (707)
.+. +...+..++....... ..+....+..+....+|+.+||..||++|||++|+|+||||...
T Consensus 228 --~~~-------------~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~hp~~~~~ 290 (299)
T 2r3i_A 228 --WPG-------------VTSMPDYKPSFPKWAR--QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDV 290 (299)
T ss_dssp --STT-------------GGGSTTCCTTSCCCCC--CCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTC
T ss_pred --hhH-------------hhcCcccchhhhcccc--hhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcChhhhcC
Confidence 000 0000111111000000 00011123334455689999999999999999999999999865
Q ss_pred CC
Q 005224 691 VS 692 (707)
Q Consensus 691 ~~ 692 (707)
..
T Consensus 291 ~~ 292 (299)
T 2r3i_A 291 TK 292 (299)
T ss_dssp CC
T ss_pred CC
Confidence 44
No 117
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=3.1e-41 Score=352.17 Aligned_cols=259 Identities=20% Similarity=0.319 Sum_probs=209.6
Q ss_pred hcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCC---hhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEE
Q 005224 374 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 449 (707)
Q Consensus 374 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV 449 (707)
.++|.+.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 93 (294)
T 2rku_A 14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 93 (294)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEE
Confidence 457889999999999999999976 68899999986532 23456788999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCC
Q 005224 450 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 529 (707)
Q Consensus 450 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~ 529 (707)
|||+++++|.+++.... .+++..++.++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 94 ~e~~~~~~L~~~~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~ 168 (294)
T 2rku_A 94 LELCRRRSLLELHKRRK--ALTEPEARYYLRQIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD 168 (294)
T ss_dssp EECCTTCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEECCST
T ss_pred EecCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChHhEEEcCCCCEEEEeccCceecccC
Confidence 99999999999986643 5899999999999999999999998 999999999999999999999999999875432
Q ss_pred CCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCC
Q 005224 530 DIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGN 609 (707)
Q Consensus 530 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 609 (707)
. .......||+.|+|||++.+..++.++||||||+++|||++|+.||...........
T Consensus 169 ~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~--------------- 226 (294)
T 2rku_A 169 G-------ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLR--------------- 226 (294)
T ss_dssp T-------CCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHH---------------
T ss_pred c-------cccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH---------------
Confidence 1 122345689999999999999999999999999999999999999965432111000
Q ss_pred CCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCCCCCCCCC
Q 005224 610 MGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSS 689 (707)
Q Consensus 610 ~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f~~ 689 (707)
+.......|. ..+....+++.+||..||++|||++|+++||||.+
T Consensus 227 ---------------~~~~~~~~~~--------------------~~~~~~~~li~~~l~~~p~~Rps~~~ll~~~~~~~ 271 (294)
T 2rku_A 227 ---------------IKKNEYSIPK--------------------HINPVAASLIQKMLQTDPTARPTINELLNDEFFTS 271 (294)
T ss_dssp ---------------HHTTCCCCCT--------------------TSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHT
T ss_pred ---------------HhhccCCCcc--------------------ccCHHHHHHHHHHcccChhhCcCHHHHhhChheec
Confidence 0000000000 11122336788899999999999999999999987
Q ss_pred CCCCC
Q 005224 690 DVSGS 694 (707)
Q Consensus 690 ~~~~~ 694 (707)
....+
T Consensus 272 ~~~~~ 276 (294)
T 2rku_A 272 GYIPA 276 (294)
T ss_dssp SCCCS
T ss_pred CCcCC
Confidence 65543
No 118
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.8e-41 Score=360.77 Aligned_cols=269 Identities=25% Similarity=0.391 Sum_probs=215.9
Q ss_pred HHHHHhcCCCccceEeeeCceEEEEEEe------CCCcEEEEEEeccCCh-hhHHHHHHHHHHHHcc-CCCcceeEEEEE
Q 005224 369 EMALATNNFNSSTQIGQGGYGKVYKGIL------PDGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRL-HHRNLVSLVGYC 440 (707)
Q Consensus 369 ~l~~~~~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l-~H~nIv~l~~~~ 440 (707)
+++...++|++.+.||+|+||+||+|.. .+++.||||++..... ...+.+.+|+.+++++ +||||+++++++
T Consensus 39 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~ 118 (344)
T 1rjb_A 39 KWEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGAC 118 (344)
T ss_dssp GGBCCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred CcccCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEE
Confidence 3455678899999999999999999996 2467899999975432 2346789999999999 899999999999
Q ss_pred EeCCeEEEEEecCCCCCHHHHHhhcCC---------------------CCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEe
Q 005224 441 DEEGEQMLVYEFMSNGTLRDQLSAKSK---------------------EPLGFAMRLSIALGSSRGILYLHTEADPPVFH 499 (707)
Q Consensus 441 ~~~~~~~lV~E~~~~gsL~~~l~~~~~---------------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH 499 (707)
...+..++||||+++|+|.+++..... ..+++..++.++.||+.||+|||+.+ |+|
T Consensus 119 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH 195 (344)
T 1rjb_A 119 TLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKS---CVH 195 (344)
T ss_dssp CSSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTT---EEE
T ss_pred eeCCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---ccc
Confidence 999999999999999999999976432 24799999999999999999999999 999
Q ss_pred cCCCCCCEEEcCCCcEEEeeecccccCCCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc-
Q 005224 500 RDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT- 578 (707)
Q Consensus 500 ~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~ellt- 578 (707)
|||||+|||++.++.+||+|||++........ ........||+.|+|||++.+..++.++|||||||++|||+|
T Consensus 196 ~Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~~-----~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~ 270 (344)
T 1rjb_A 196 RDLAARNVLVTHGKVVKICDFGLARDIMSDSN-----YVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSL 270 (344)
T ss_dssp TTCSGGGEEEETTTEEEECCCGGGSCGGGCTT-----SEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTT
T ss_pred CCCChhhEEEcCCCcEEeCCCccCcccccCcc-----ceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcC
Confidence 99999999999999999999999986543221 122344567889999999999999999999999999999998
Q ss_pred CCCCCCCCchhHHHHHHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCC
Q 005224 579 GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMP 654 (707)
Q Consensus 579 G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~ 654 (707)
|..||............. . .+.....+..++..+.+++.+||+.+|.+||++.++++.|+.+....+
T Consensus 271 g~~p~~~~~~~~~~~~~~-~--------~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~ 337 (344)
T 1rjb_A 271 GVNPYPGIPVDANFYKLI-Q--------NGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLADAE 337 (344)
T ss_dssp SCCSSTTCCCSHHHHHHH-H--------TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC----
T ss_pred CCCCcccCCcHHHHHHHH-h--------cCCCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHHH
Confidence 999997544322111111 1 112223455567889999999999999999999999999998765443
No 119
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=4.6e-42 Score=366.30 Aligned_cols=258 Identities=21% Similarity=0.349 Sum_probs=201.1
Q ss_pred HhcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHcc-CCCcceeEEEEEEeCCeEEEEE
Q 005224 373 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQMLVY 450 (707)
Q Consensus 373 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lV~ 450 (707)
..++|+..+.||+|+||+||+|..+ +++.||||++..... ...+|++++.++ +||||+++++++.+.+..++||
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~----~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ 95 (342)
T 2qr7_A 20 FTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR----DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVT 95 (342)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC----CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEE
T ss_pred ccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC----ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEE
Confidence 3567999999999999999999975 689999999976432 234688888888 7999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCC----CcEEEeeecccccC
Q 005224 451 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHK----FTAKVADFGLSRLA 526 (707)
Q Consensus 451 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~----~~~kl~DFGla~~~ 526 (707)
||+++|+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||+.++ +.+||+|||+++..
T Consensus 96 E~~~gg~L~~~i~~~--~~~~~~~~~~~~~qi~~al~~lH~~g---ivHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~ 170 (342)
T 2qr7_A 96 ELMKGGELLDKILRQ--KFFSEREASAVLFTITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQL 170 (342)
T ss_dssp CCCCSCBHHHHHHTC--TTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEESSSSCSGGGEEECCCTTCEEC
T ss_pred eCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---cEeccCCHHHEEEecCCCCcCeEEEEECCCcccC
Confidence 999999999999654 35999999999999999999999999 9999999999998543 35999999999865
Q ss_pred CCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhc
Q 005224 527 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVI 606 (707)
Q Consensus 527 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~ 606 (707)
.... .......||+.|+|||++.+..++.++|||||||++|||++|+.||.......
T Consensus 171 ~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~---------------- 227 (342)
T 2qr7_A 171 RAEN-------GLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDT---------------- 227 (342)
T ss_dssp BCTT-------CCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSC----------------
T ss_pred cCCC-------CceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCC----------------
Confidence 4321 12234578999999999998889999999999999999999999996432100
Q ss_pred cCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCCCCCC
Q 005224 607 DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPY 686 (707)
Q Consensus 607 ~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hp~ 686 (707)
..++.+.+...--..+.. ..+..++.+.+||.+||+.||++|+|++|+|+|||
T Consensus 228 -----------~~~~~~~i~~~~~~~~~~----------------~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~hp~ 280 (342)
T 2qr7_A 228 -----------PEEILARIGSGKFSLSGG----------------YWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRHPW 280 (342)
T ss_dssp -----------HHHHHHHHHHCCCCCCST----------------TTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSHH
T ss_pred -----------HHHHHHHHccCCcccCcc----------------ccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCCe
Confidence 001111111100000000 00112233457888999999999999999999999
Q ss_pred CCC
Q 005224 687 VSS 689 (707)
Q Consensus 687 f~~ 689 (707)
|..
T Consensus 281 ~~~ 283 (342)
T 2qr7_A 281 IVH 283 (342)
T ss_dssp HHT
T ss_pred ecC
Confidence 954
No 120
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=9.4e-42 Score=354.67 Aligned_cols=256 Identities=24% Similarity=0.362 Sum_probs=200.2
Q ss_pred cCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCC-hhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEec
Q 005224 375 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 452 (707)
Q Consensus 375 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E~ 452 (707)
++|.+.+.||+|+||+||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 101 (285)
T 3is5_A 22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMET 101 (285)
T ss_dssp HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEe
Confidence 57889999999999999999975 68999999987543 23457899999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhc--CCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEE---cCCCcEEEeeecccccCC
Q 005224 453 MSNGTLRDQLSAK--SKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILL---DHKFTAKVADFGLSRLAP 527 (707)
Q Consensus 453 ~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl---~~~~~~kl~DFGla~~~~ 527 (707)
+++|+|.+++... ....+++..++.++.|+++||+|||+.+ |+||||||+||++ +.++.+||+|||+++...
T Consensus 102 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~ 178 (285)
T 3is5_A 102 CEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQH---VVHKDLKPENILFQDTSPHSPIKIIDFGLAELFK 178 (285)
T ss_dssp CSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEESSSSTTCCEEECCCCCCCC--
T ss_pred CCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCC---EEECCCCHHHEEEecCCCCCCEEEEeeecceecC
Confidence 9999999998653 2356999999999999999999999999 9999999999999 556889999999997654
Q ss_pred CCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhcc
Q 005224 528 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVID 607 (707)
Q Consensus 528 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 607 (707)
.. .......||+.|+|||++. ..++.++|||||||++|||++|+.||............
T Consensus 179 ~~--------~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~~~------------ 237 (285)
T 3is5_A 179 SD--------EHSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKA------------ 237 (285)
T ss_dssp ----------------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH------------
T ss_pred Cc--------ccCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHhhh------------
Confidence 32 1223456899999999986 56889999999999999999999999654321100000
Q ss_pred CCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCCCCCCC
Q 005224 608 GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYV 687 (707)
Q Consensus 608 ~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f 687 (707)
...........++ .++...+|+.+||..||++|||++|+|+||||
T Consensus 238 -----------------~~~~~~~~~~~~~------------------~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~f 282 (285)
T 3is5_A 238 -----------------TYKEPNYAVECRP------------------LTPQAVDLLKQMLTKDPERRPSAAQVLHHEWF 282 (285)
T ss_dssp -----------------HHCCCCCCC--CC------------------CCHHHHHHHHHHTCSCTTTSCCHHHHHTSGGG
T ss_pred -----------------ccCCcccccccCc------------------CCHHHHHHHHHHccCChhhCcCHHHHhcCHHh
Confidence 0000000000011 12233468888999999999999999999999
Q ss_pred CC
Q 005224 688 SS 689 (707)
Q Consensus 688 ~~ 689 (707)
..
T Consensus 283 ~~ 284 (285)
T 3is5_A 283 KQ 284 (285)
T ss_dssp GC
T ss_pred hc
Confidence 74
No 121
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=7.2e-41 Score=356.11 Aligned_cols=277 Identities=27% Similarity=0.438 Sum_probs=214.1
Q ss_pred hcCCCccceEeeeCceEEEEEEeCC-----CcEEEEEEeccCCh-hhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEE
Q 005224 374 TNNFNSSTQIGQGGYGKVYKGILPD-----GTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQM 447 (707)
Q Consensus 374 ~~~~~~~~~lG~G~~g~Vy~~~~~~-----~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~ 447 (707)
.++|+..+.||+|+||+||+|.... +..||||++..... .....+.+|+++++.++||||+++++++...+..+
T Consensus 43 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 122 (333)
T 1mqb_A 43 PSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMM 122 (333)
T ss_dssp TTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEE
T ss_pred hHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcE
Confidence 3567778999999999999998642 34699999976433 33467899999999999999999999999999999
Q ss_pred EEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCC
Q 005224 448 LVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAP 527 (707)
Q Consensus 448 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~ 527 (707)
+||||+++|+|.+++... ...+++..++.++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++...
T Consensus 123 lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~ 198 (333)
T 1mqb_A 123 IITEYMENGALDKFLREK-DGEFSVLQLVGMLRGIAAGMKYLANMN---YVHRDLAARNILVNSNLVCKVSDFGLSRVLE 198 (333)
T ss_dssp EEEECCTTEEHHHHHHHT-TTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCCCC-----
T ss_pred EEEeCCCCCcHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChheEEECCCCcEEECCCCcchhhc
Confidence 999999999999999764 346999999999999999999999999 9999999999999999999999999998764
Q ss_pred CCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHhhcccchhhc
Q 005224 528 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVI 606 (707)
Q Consensus 528 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~ 606 (707)
..... ........+|+.|+|||++.+..++.++|||||||++|||++ |+.||...... +... .+.
T Consensus 199 ~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~-~~~~---------~~~ 264 (333)
T 1mqb_A 199 DDPEA----TYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNH-EVMK---------AIN 264 (333)
T ss_dssp ----------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-HHHH---------HHH
T ss_pred ccccc----ccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHH-HHHH---------HHH
Confidence 32210 111223346788999999999999999999999999999999 99999754431 1111 111
Q ss_pred cCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCC
Q 005224 607 DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPP 676 (707)
Q Consensus 607 ~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~ 676 (707)
.+.....+..++..+.+++.+||+.+|.+||++.++++.|+.+.... +.+..+..++|..|+
T Consensus 265 ~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~--------~~~~~~~~~~p~~~~ 326 (333)
T 1mqb_A 265 DGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAP--------DSLKTLADFDPRVSI 326 (333)
T ss_dssp TTCCCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSG--------GGGGSBCCC------
T ss_pred CCCcCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcc--------hhhhhhcCCCccchh
Confidence 22233345567788999999999999999999999999999887633 345566777776665
No 122
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=4.3e-42 Score=388.45 Aligned_cols=265 Identities=30% Similarity=0.461 Sum_probs=220.0
Q ss_pred HHHHHHHhcCCCccceEeeeCceEEEEEEeCCCcEEEEEEeccCChhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeE
Q 005224 367 YGEMALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQ 446 (707)
Q Consensus 367 ~~~l~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~ 446 (707)
.++++...++|++.+.||+|+||.||+|.++++..||||+++... ...++|.+|+++|++++|+||+++++++.+ +..
T Consensus 259 ~~~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~ 336 (535)
T 2h8h_A 259 KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPI 336 (535)
T ss_dssp TTCSBCCGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSC
T ss_pred ccceecchhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccc
Confidence 344556677889999999999999999999888889999998644 345689999999999999999999999876 678
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccC
Q 005224 447 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 526 (707)
Q Consensus 447 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~ 526 (707)
++||||+++|+|.+++.......+++..++.++.||++||+|||+++ |+||||||+|||+++++.+||+|||+++..
T Consensus 337 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~~ 413 (535)
T 2h8h_A 337 YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLI 413 (535)
T ss_dssp EEEECCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCTTSTTTC
T ss_pred eEeeehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCHhhEEEcCCCcEEEcccccceec
Confidence 99999999999999997654456899999999999999999999999 999999999999999999999999999865
Q ss_pred CCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHhhcccchhh
Q 005224 527 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSV 605 (707)
Q Consensus 527 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~ 605 (707)
.... ........++..|+|||++.+..++.++|||||||++|||++ |+.||...... +... .+
T Consensus 414 ~~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~-~~~~---------~i 477 (535)
T 2h8h_A 414 EDNE------YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR-EVLD---------QV 477 (535)
T ss_dssp CCHH------HHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHH-HHHH---------HH
T ss_pred CCCc------eecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH-HHHH---------HH
Confidence 4211 011123346788999999999999999999999999999999 99999754431 1111 11
Q ss_pred ccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhc
Q 005224 606 IDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNM 652 (707)
Q Consensus 606 ~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~ 652 (707)
..+.....+..++..+.+++.+||+.+|++||++.++++.|+.+...
T Consensus 478 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~ 524 (535)
T 2h8h_A 478 ERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS 524 (535)
T ss_dssp HTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCC
T ss_pred HcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhhc
Confidence 12223345667778899999999999999999999999999977543
No 123
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=3.2e-41 Score=357.84 Aligned_cols=258 Identities=26% Similarity=0.433 Sum_probs=205.6
Q ss_pred hcCCCccceEeeeCceEEEEEEeC-CCc----EEEEEEeccCC-hhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEE
Q 005224 374 TNNFNSSTQIGQGGYGKVYKGILP-DGT----VVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQM 447 (707)
Q Consensus 374 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~----~vavK~l~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~ 447 (707)
.++|+..+.||+|+||+||+|.+. +++ .||+|.+.... ....+.+.+|+.++++++||||++++++|.... .+
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~ 92 (327)
T 3poz_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ 92 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EE
T ss_pred HHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eE
Confidence 357889999999999999999964 444 36888876432 234578999999999999999999999998754 78
Q ss_pred EEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCC
Q 005224 448 LVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAP 527 (707)
Q Consensus 448 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~ 527 (707)
+|+||+++|+|.+++.... ..+++..++.++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 93 ~v~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~ 168 (327)
T 3poz_A 93 LITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLG 168 (327)
T ss_dssp EEEECCTTCBHHHHHHHST-TSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEEETTEEEECCTTHHHHHT
T ss_pred EEEEecCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHhhCC---eeCCCCChheEEECCCCCEEEccCcceeEcc
Confidence 9999999999999997643 45999999999999999999999998 9999999999999999999999999998764
Q ss_pred CCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHhhcccchhhc
Q 005224 528 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVI 606 (707)
Q Consensus 528 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~ 606 (707)
.... ........+|+.|+|||++.+..++.++|||||||++|||++ |+.||.......- . ..+.
T Consensus 169 ~~~~-----~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~--~--------~~~~ 233 (327)
T 3poz_A 169 AEEK-----EYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI--S--------SILE 233 (327)
T ss_dssp TTCC------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGH--H--------HHHH
T ss_pred CCcc-----cccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHHH--H--------HHHH
Confidence 3321 112233456889999999999999999999999999999999 9999975433111 0 0111
Q ss_pred cCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 005224 607 DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 651 (707)
Q Consensus 607 ~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~ 651 (707)
.+.....+..++..+.+++.+||+.+|.+||++.++++.|+.+..
T Consensus 234 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~ 278 (327)
T 3poz_A 234 KGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 278 (327)
T ss_dssp TTCCCCCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHT
T ss_pred cCCCCCCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 122333456677889999999999999999999999999988764
No 124
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=4.1e-42 Score=369.75 Aligned_cols=297 Identities=20% Similarity=0.318 Sum_probs=214.5
Q ss_pred hcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCC-hhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEe
Q 005224 374 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 451 (707)
Q Consensus 374 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E 451 (707)
.++|++.+.||+|+||+||+|... +++.||+|++.... ....+.+.+|+++++.++||||+++++++...+..++|||
T Consensus 32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 111 (360)
T 3eqc_A 32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 111 (360)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEE
Confidence 457899999999999999999975 78999999987643 3335678999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhC-CCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCC
Q 005224 452 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTE-ADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 530 (707)
Q Consensus 452 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~-~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~ 530 (707)
|+++++|.+++.... .+++..+..++.|++.||+|||+. + |+||||||+|||++.++.+||+|||++.....
T Consensus 112 ~~~~~~L~~~l~~~~--~~~~~~~~~i~~~i~~~l~~lh~~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~-- 184 (360)
T 3eqc_A 112 HMDGGSLDQVLKKAG--RIPEQILGKVSIAVIKGLTYLREKHK---IMHRDVKPSNILVNSRGEIKLCDFGVSGQLID-- 184 (360)
T ss_dssp CCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHHHC---CCCSCCSGGGEEECTTCCEEECCCCCCHHHHH--
T ss_pred CCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHhCC---EEcCCccHHHEEECCCCCEEEEECCCCccccc--
Confidence 999999999997653 489999999999999999999985 7 99999999999999999999999999865421
Q ss_pred CCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCCC
Q 005224 531 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 610 (707)
Q Consensus 531 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 610 (707)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||......... ..... ...+..
T Consensus 185 -------~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~--~~~~~-----~~~~~~ 250 (360)
T 3eqc_A 185 -------SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELE--LMFGC-----QVEGDA 250 (360)
T ss_dssp -------HC----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHH--HHHC------------
T ss_pred -------ccccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH--HHhcc-----cccccC
Confidence 1223457899999999999999999999999999999999999999765432111 11000 000000
Q ss_pred CCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcC-C--CCCCCCCccccCCCCCCCCCCCCCCcCCCCCCC
Q 005224 611 GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMM-P--ESDTKTPEFINSEHTSKEETPPSSSSMLKHPYV 687 (707)
Q Consensus 611 ~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~-~--~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f 687 (707)
...+... ....... .-+..+........++++.+....... + ..+..+.+||.+||+.||++|||++|+|+||||
T Consensus 251 ~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 328 (360)
T 3eqc_A 251 AETPPRP-RTPGRPL-NKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFI 328 (360)
T ss_dssp -------------------------CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHHH
T ss_pred CCCCCCc-ccCCCcc-cccccCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhChHh
Confidence 0000000 0000000 001111112223334443333221110 1 112345689999999999999999999999999
Q ss_pred CCCCCC
Q 005224 688 SSDVSG 693 (707)
Q Consensus 688 ~~~~~~ 693 (707)
......
T Consensus 329 ~~~~~~ 334 (360)
T 3eqc_A 329 KRSDAE 334 (360)
T ss_dssp HHHHHS
T ss_pred hcchHh
Confidence 765543
No 125
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=7.6e-41 Score=351.74 Aligned_cols=262 Identities=27% Similarity=0.445 Sum_probs=207.9
Q ss_pred hcCCCccceEeeeCceEEEEEEeCCCcEEEEEEeccCChhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEecC
Q 005224 374 TNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 453 (707)
Q Consensus 374 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E~~ 453 (707)
.++|++.+.||+|+||+||+|.+. ++.||||++... ...+.+.+|++++++++||||+++++++. +..++||||+
T Consensus 7 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~lv~e~~ 81 (307)
T 2eva_A 7 YKEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYA 81 (307)
T ss_dssp GGGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCT--TTTEEEEECC
T ss_pred HhHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEc--CCcEEEEEcC
Confidence 357888999999999999999984 788999998753 34568899999999999999999999886 3479999999
Q ss_pred CCCCHHHHHhhcCC-CCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCc-EEEeeecccccCCCCCC
Q 005224 454 SNGTLRDQLSAKSK-EPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFT-AKVADFGLSRLAPVPDI 531 (707)
Q Consensus 454 ~~gsL~~~l~~~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~-~kl~DFGla~~~~~~~~ 531 (707)
++|+|.+++..... ..+++..++.++.|+++||+|||+.+..+|+||||||+||+++.++. +||+|||+++.....
T Consensus 82 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~-- 159 (307)
T 2eva_A 82 EGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH-- 159 (307)
T ss_dssp TTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC---------
T ss_pred CCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc--
Confidence 99999999976433 24789999999999999999999932223999999999999998886 799999999754321
Q ss_pred CCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCCCC
Q 005224 532 EGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 611 (707)
Q Consensus 532 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 611 (707)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||............ ....+...
T Consensus 160 --------~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~--------~~~~~~~~ 223 (307)
T 2eva_A 160 --------MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMW--------AVHNGTRP 223 (307)
T ss_dssp -------------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHH--------HHHTTCCC
T ss_pred --------cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHH--------HHhcCCCC
Confidence 12345899999999999999999999999999999999999999754322111111 11122233
Q ss_pred CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCC
Q 005224 612 SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDT 658 (707)
Q Consensus 612 ~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~ 658 (707)
..+..++..+.+++.+||+.+|.+||++.++++.|+.+...++..+.
T Consensus 224 ~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~~~~~ 270 (307)
T 2eva_A 224 PLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFPGADE 270 (307)
T ss_dssp CCBTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGGGCCCTTS
T ss_pred CcccccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhccCCCC
Confidence 34455667899999999999999999999999999999887765443
No 126
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=3.9e-41 Score=352.37 Aligned_cols=256 Identities=23% Similarity=0.371 Sum_probs=202.3
Q ss_pred hcCCCccceEeeeCceEEEEEEeCCCcEEEEEEeccCChhhHHHHHHHHHHHHc--cCCCcceeEEEEEEeC----CeEE
Q 005224 374 TNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSR--LHHRNLVSLVGYCDEE----GEQM 447 (707)
Q Consensus 374 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~--l~H~nIv~l~~~~~~~----~~~~ 447 (707)
.++|++.+.||+|+||+||+|.. +++.||||++... ..+.+..|.+++.. ++||||+++++++... ...+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~ 82 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLW 82 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEE
T ss_pred cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeE
Confidence 46799999999999999999998 6899999998653 34566677777766 7999999999997543 4589
Q ss_pred EEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHH--------hCCCCCeEecCCCCCCEEEcCCCcEEEee
Q 005224 448 LVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLH--------TEADPPVFHRDIKASNILLDHKFTAKVAD 519 (707)
Q Consensus 448 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH--------~~~~~~ivH~Dlkp~NILl~~~~~~kl~D 519 (707)
+||||+++|+|.++++. ..+++..++.++.|++.||+||| +.+ |+||||||+|||++.++.+||+|
T Consensus 83 lv~e~~~~g~L~~~l~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~---ivH~Dlkp~Nill~~~~~~kl~D 156 (301)
T 3q4u_A 83 LITHYHEMGSLYDYLQL---TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPA---IAHRDLKSKNILVKKNGQCCIAD 156 (301)
T ss_dssp EEECCCTTCBHHHHHTT---CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCE---EECSCCCGGGEEECTTSCEEECC
T ss_pred EehhhccCCCHHHHHhh---cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCC---eecCCCChHhEEEcCCCCEEEee
Confidence 99999999999999953 35999999999999999999999 777 99999999999999999999999
Q ss_pred ecccccCCCCCCCCccccceecccccCCCccchhhhccC------CCCCchhhHHHHHHHHHHHcC----------CCCC
Q 005224 520 FGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTH------KLTDKSDVYSLGVVFLELLTG----------MQPI 583 (707)
Q Consensus 520 FGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~------~~s~~sDVwS~Gvll~elltG----------~~pf 583 (707)
||+++........ .........||+.|+|||++.+. .++.++|||||||++|||++| +.||
T Consensus 157 fg~a~~~~~~~~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf 233 (301)
T 3q4u_A 157 LGLAVMHSQSTNQ---LDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPF 233 (301)
T ss_dssp CTTCEEEETTTTE---EECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTT
T ss_pred CCCeeeccccccc---ccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccc
Confidence 9999765432211 01112334789999999999876 455789999999999999999 8888
Q ss_pred CCCch---hHHHHHHHhhcccchhhccCCCCC-----CChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 005224 584 SHGKN---IVREVNIAYQSSMMFSVIDGNMGS-----YPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 649 (707)
Q Consensus 584 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~ 649 (707)
..... .......... ....... .+..++..+.+++.+||+.+|.+|||+.++++.|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 234 YDVVPNDPSFEDMRKVVC-------VDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp TTTSCSSCCHHHHHHHHT-------TSCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred cccCCCCcchhhhhHHHh-------ccCCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 54221 1111111111 1111222 2346788999999999999999999999999999875
No 127
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=7.5e-42 Score=379.22 Aligned_cols=200 Identities=29% Similarity=0.435 Sum_probs=176.6
Q ss_pred cCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCCh---hhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEE
Q 005224 375 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 450 (707)
Q Consensus 375 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~ 450 (707)
++|.+.+.||+|+||.||+|... +|+.||||++..... ...+.+.+|+++++.++||||+++++++...+..++||
T Consensus 16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~ 95 (476)
T 2y94_A 16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVM 95 (476)
T ss_dssp TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 57889999999999999999975 799999999875322 22457899999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCC
Q 005224 451 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 530 (707)
Q Consensus 451 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~ 530 (707)
||+++|+|.+++... ..+++..++.++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 96 E~~~gg~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~ 170 (476)
T 2y94_A 96 EYVSGGELFDYICKN--GRLDEKESRRLFQQILSGVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE 170 (476)
T ss_dssp ECCSSEEHHHHTTSS--SSCCHHHHHHHHHHHHHHHHHHHTTT---EECSCCSGGGEEECTTCCEEECCCSSCEECCTTC
T ss_pred eCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---CCcccccHHHEEEecCCCeEEEeccchhhccccc
Confidence 999999999999653 45999999999999999999999998 9999999999999999999999999998764321
Q ss_pred CCCccccceecccccCCCccchhhhccCCC-CCchhhHHHHHHHHHHHcCCCCCCCCc
Q 005224 531 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKL-TDKSDVYSLGVVFLELLTGMQPISHGK 587 (707)
Q Consensus 531 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-s~~sDVwS~Gvll~elltG~~pf~~~~ 587 (707)
......||+.|+|||++.+..+ +.++|||||||++|||++|+.||....
T Consensus 171 --------~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~ 220 (476)
T 2y94_A 171 --------FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDH 220 (476)
T ss_dssp --------CBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred --------cccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCC
Confidence 2234579999999999998765 679999999999999999999997543
No 128
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.9e-42 Score=367.90 Aligned_cols=287 Identities=22% Similarity=0.352 Sum_probs=204.0
Q ss_pred HHhcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCChhh-----HHHHHHHHHHHHccCCCcceeEEEEEEeCCe
Q 005224 372 LATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQG-----EKEFLTEIQFLSRLHHRNLVSLVGYCDEEGE 445 (707)
Q Consensus 372 ~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~-----~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~ 445 (707)
...++|++.+.||+|+||.||+|... +|+.||||++....... .+.+.+|+++++.++||||+++++++.+.+.
T Consensus 7 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 86 (346)
T 1ua2_A 7 SRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSN 86 (346)
T ss_dssp ------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTC
T ss_pred HHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCc
Confidence 34578999999999999999999975 68999999987533221 2467899999999999999999999999999
Q ss_pred EEEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeeccccc
Q 005224 446 QMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRL 525 (707)
Q Consensus 446 ~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~ 525 (707)
.++||||+++ +|.+++... ...+++..++.++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+++.
T Consensus 87 ~~lv~e~~~~-~l~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~ 161 (346)
T 1ua2_A 87 ISLVFDFMET-DLEVIIKDN-SLVLTPSHIKAYMLMTLQGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKS 161 (346)
T ss_dssp CEEEEECCSE-EHHHHHTTC-CSSCCSSHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECCCGGGST
T ss_pred eEEEEEcCCC-CHHHHHHhc-CcCCCHHHHHHHHHHHHHHHHHHHHCC---EECCCCCHHHEEEcCCCCEEEEeccccee
Confidence 9999999975 899888654 345888999999999999999999999 99999999999999999999999999987
Q ss_pred CCCCCCCCccccceecccccCCCccchhhhccC-CCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchh
Q 005224 526 APVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFS 604 (707)
Q Consensus 526 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~sDVwS~Gvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~ 604 (707)
..... .......||+.|+|||++.+. .++.++|||||||++|||++|..||...... +..........
T Consensus 162 ~~~~~-------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~-~~~~~i~~~~~--- 230 (346)
T 1ua2_A 162 FGSPN-------RAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDL-DQLTRIFETLG--- 230 (346)
T ss_dssp TTSCC-------CCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHC---
T ss_pred ccCCc-------ccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHH-HHHHHHHHHcC---
Confidence 64321 123345689999999999764 5889999999999999999999888654432 21111111000
Q ss_pred hccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCCCC
Q 005224 605 VIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKH 684 (707)
Q Consensus 605 ~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~H 684 (707)
.......+..+. +. . ......+|... + .......+....+||.+||..||++|||++|+|+|
T Consensus 231 --~~~~~~~~~~~~-----~~-~--~~~~~~~~~~~-----~---~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 292 (346)
T 1ua2_A 231 --TPTEEQWPDMCS-----LP-D--YVTFKSFPGIP-----L---HHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM 292 (346)
T ss_dssp --CCCTTTSSSTTS-----ST-T--CCCCCCCCCCC-----H---HHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred --CCChhhhhhhcc-----Cc-c--cccccccCCCC-----h---HHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 000000000000 00 0 00000111100 0 01123334455679999999999999999999999
Q ss_pred CCCCCCCC
Q 005224 685 PYVSSDVS 692 (707)
Q Consensus 685 p~f~~~~~ 692 (707)
|||.....
T Consensus 293 ~~f~~~~~ 300 (346)
T 1ua2_A 293 KYFSNRPG 300 (346)
T ss_dssp GGGTSSSC
T ss_pred hhhhcCCC
Confidence 99976543
No 129
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=4.3e-42 Score=374.12 Aligned_cols=198 Identities=22% Similarity=0.272 Sum_probs=172.1
Q ss_pred hcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHccC--------CCcceeEEEEEE---
Q 005224 374 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLH--------HRNLVSLVGYCD--- 441 (707)
Q Consensus 374 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~--------H~nIv~l~~~~~--- 441 (707)
.++|++.++||+|+||+||+|... +++.||||++... ....+.+.+|+++++.++ |+||+++++++.
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~ 114 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISG 114 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEE
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecC
Confidence 468999999999999999999964 7899999999753 334567889999999985 788999999987
Q ss_pred -eCCeEEEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhC-CCCCeEecCCCCCCEEEcCCC------
Q 005224 442 -EEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTE-ADPPVFHRDIKASNILLDHKF------ 513 (707)
Q Consensus 442 -~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~-~~~~ivH~Dlkp~NILl~~~~------ 513 (707)
.....++||||+ +++|.+.+.......+++..++.++.||++||+|||++ + |+||||||+|||++.++
T Consensus 115 ~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~g---ivHrDikp~NIll~~~~~~~~~~ 190 (397)
T 1wak_A 115 VNGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCR---IIHTDIKPENILLSVNEQYIRRL 190 (397)
T ss_dssp TTEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTC---EECCCCSGGGEEECCCHHHHHHH
T ss_pred CCCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHeeEeccchhhhhh
Confidence 455789999999 67777777666556799999999999999999999998 8 99999999999999775
Q ss_pred -------------------------------------------cEEEeeecccccCCCCCCCCccccceecccccCCCcc
Q 005224 514 -------------------------------------------TAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYL 550 (707)
Q Consensus 514 -------------------------------------------~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ 550 (707)
.+||+|||+++..... .....||+.|+
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~----------~~~~~gt~~y~ 260 (397)
T 1wak_A 191 AAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH----------FTEDIQTRQYR 260 (397)
T ss_dssp HHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC----------SCSCCSCGGGC
T ss_pred hhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc----------CccCCCCCccc
Confidence 8999999999865321 23346899999
Q ss_pred chhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCC
Q 005224 551 DPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 586 (707)
Q Consensus 551 aPE~~~~~~~s~~sDVwS~Gvll~elltG~~pf~~~ 586 (707)
|||++.+..++.++|||||||++|||++|+.||...
T Consensus 261 aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~ 296 (397)
T 1wak_A 261 SLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPH 296 (397)
T ss_dssp CHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCC
T ss_pred CChhhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCC
Confidence 999999999999999999999999999999999643
No 130
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=6.1e-41 Score=352.93 Aligned_cols=266 Identities=24% Similarity=0.396 Sum_probs=218.9
Q ss_pred HHhcCCCccceEeeeCceEEEEEEe------CCCcEEEEEEeccCCh-hhHHHHHHHHHHHHcc-CCCcceeEEEEEEeC
Q 005224 372 LATNNFNSSTQIGQGGYGKVYKGIL------PDGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEE 443 (707)
Q Consensus 372 ~~~~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~ 443 (707)
...++|+..+.||+|+||+||+|.+ .+++.||||++..... ...+.+.+|+++++++ +||||+++++++...
T Consensus 20 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~ 99 (313)
T 1t46_A 20 FPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIG 99 (313)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred cChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecC
Confidence 3456888999999999999999985 3578999999976443 3356789999999999 999999999999999
Q ss_pred CeEEEEEecCCCCCHHHHHhhcCC----------------CCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCE
Q 005224 444 GEQMLVYEFMSNGTLRDQLSAKSK----------------EPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNI 507 (707)
Q Consensus 444 ~~~~lV~E~~~~gsL~~~l~~~~~----------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NI 507 (707)
+..++||||+++|+|.+++..... ..+++..++.++.|+++||+|||+.+ |+||||||+||
T Consensus 100 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Ni 176 (313)
T 1t46_A 100 GPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNI 176 (313)
T ss_dssp SSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGE
T ss_pred CCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCccceE
Confidence 999999999999999999976542 25899999999999999999999998 99999999999
Q ss_pred EEcCCCcEEEeeecccccCCCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc-CCCCCCCC
Q 005224 508 LLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHG 586 (707)
Q Consensus 508 Ll~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~ellt-G~~pf~~~ 586 (707)
+++.++.+||+|||+++....... ........+|+.|+|||++.+..++.++|||||||++|||++ |+.||...
T Consensus 177 l~~~~~~~kl~Dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~ 251 (313)
T 1t46_A 177 LLTHGRITKICDFGLARDIKNDSN-----YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGM 251 (313)
T ss_dssp EEETTTEEEECCCGGGSCTTSCTT-----SEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTC
T ss_pred EEcCCCCEEEcccccccccccccc-----ceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcc
Confidence 999999999999999987654321 112234457889999999999999999999999999999999 99999754
Q ss_pred chhHHHHHHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCC
Q 005224 587 KNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMP 654 (707)
Q Consensus 587 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~ 654 (707)
.......... . .......+..++..+.+++.+|++.+|.+||++.++++.|+++.....
T Consensus 252 ~~~~~~~~~~-~--------~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~ 310 (313)
T 1t46_A 252 PVDSKFYKMI-K--------EGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISEST 310 (313)
T ss_dssp CSSHHHHHHH-H--------HTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTC
T ss_pred cchhHHHHHh-c--------cCCCCCCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHhh
Confidence 4322211111 1 111122344566789999999999999999999999999998876543
No 131
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=3.9e-41 Score=358.43 Aligned_cols=258 Identities=21% Similarity=0.323 Sum_probs=207.6
Q ss_pred hcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCC---hhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEE
Q 005224 374 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 449 (707)
Q Consensus 374 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV 449 (707)
.++|.+.+.||+|+||.||++... +++.||+|++.... ....+.+.+|+.+++.++|+||+++++++.+.+..++|
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 119 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 119 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence 357888999999999999999975 68899999986532 23456788999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCC
Q 005224 450 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 529 (707)
Q Consensus 450 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~ 529 (707)
|||+++++|.+++... ..+++..++.++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 120 ~e~~~~~~L~~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 194 (335)
T 2owb_A 120 LELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD 194 (335)
T ss_dssp ECCCTTCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTCCEEECCCTTCEECCST
T ss_pred EecCCCCCHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCC---CEecCCCchhEEEcCCCCEEEeeccCceecccC
Confidence 9999999999998764 35899999999999999999999998 999999999999999999999999999876432
Q ss_pred CCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCC
Q 005224 530 DIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGN 609 (707)
Q Consensus 530 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 609 (707)
. .......||..|+|||++.+..++.++|||||||++|||++|+.||...........
T Consensus 195 ~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~--------------- 252 (335)
T 2owb_A 195 G-------ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLR--------------- 252 (335)
T ss_dssp T-------CCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHH---------------
T ss_pred c-------ccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHHHHH---------------
Confidence 1 122345689999999999999999999999999999999999999965432111100
Q ss_pred CCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCCCCCCCCC
Q 005224 610 MGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSS 689 (707)
Q Consensus 610 ~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f~~ 689 (707)
+ .......| ...+....++|.+||..||++|||++|+|+||||.+
T Consensus 253 --------------~-~~~~~~~~--------------------~~~~~~~~~li~~~l~~dp~~Rps~~ell~~~~~~~ 297 (335)
T 2owb_A 253 --------------I-KKNEYSIP--------------------KHINPVAASLIQKMLQTDPTARPTINELLNDEFFTS 297 (335)
T ss_dssp --------------H-HHTCCCCC--------------------TTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHT
T ss_pred --------------H-hcCCCCCC--------------------ccCCHHHHHHHHHHccCChhHCcCHHHHhcCccccC
Confidence 0 00000000 001112235778888889999999999999999977
Q ss_pred CCCC
Q 005224 690 DVSG 693 (707)
Q Consensus 690 ~~~~ 693 (707)
....
T Consensus 298 ~~~~ 301 (335)
T 2owb_A 298 GYIP 301 (335)
T ss_dssp SCCC
T ss_pred CCcc
Confidence 6553
No 132
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=1.1e-41 Score=371.27 Aligned_cols=196 Identities=24% Similarity=0.363 Sum_probs=163.0
Q ss_pred cCCCcc-ceEeeeCceEEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHc-cCCCcceeEEEEEEe----CCeEE
Q 005224 375 NNFNSS-TQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSR-LHHRNLVSLVGYCDE----EGEQM 447 (707)
Q Consensus 375 ~~~~~~-~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~E~~~l~~-l~H~nIv~l~~~~~~----~~~~~ 447 (707)
++|.+. +.||+|+||+||+|... +++.||||++... ..+.+|++++.+ .+||||+++++++.. .+..+
T Consensus 61 ~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~-----~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~ 135 (400)
T 1nxk_A 61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL 135 (400)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred ccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc-----hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEE
Confidence 456565 78999999999999975 7899999998642 356788888744 589999999999865 56789
Q ss_pred EEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcC---CCcEEEeeecccc
Q 005224 448 LVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDH---KFTAKVADFGLSR 524 (707)
Q Consensus 448 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~---~~~~kl~DFGla~ 524 (707)
+||||+++|+|.+++.......+++..++.++.||+.||.|||+.+ |+||||||+|||++. ++.+||+|||+++
T Consensus 136 lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~ 212 (400)
T 1nxk_A 136 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAK 212 (400)
T ss_dssp EEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSSSTTCCEEECCCTTCE
T ss_pred EEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCcCcceEEEecCCCCccEEEEeccccc
Confidence 9999999999999998766667999999999999999999999998 999999999999997 7899999999998
Q ss_pred cCCCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCC
Q 005224 525 LAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 586 (707)
Q Consensus 525 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~elltG~~pf~~~ 586 (707)
..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 213 ~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~ 266 (400)
T 1nxk_A 213 ETTSH--------NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSN 266 (400)
T ss_dssp ECC-------------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCC
T ss_pred ccCCC--------CccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCC
Confidence 65421 1233567899999999999999999999999999999999999999653
No 133
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=1.1e-41 Score=394.41 Aligned_cols=204 Identities=22% Similarity=0.348 Sum_probs=178.1
Q ss_pred HHhcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCC---hhhHHHHHHHHHHHHcc-CCCcceeEEEEEEeCCeE
Q 005224 372 LATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQ 446 (707)
Q Consensus 372 ~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~ 446 (707)
...++|++.+.||+|+||.||+|... +++.||||++.... ....+.+..|..++..+ +|++|+++++++.+.+..
T Consensus 338 ~~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~ 417 (674)
T 3pfq_A 338 MKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRL 417 (674)
T ss_dssp --CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEE
T ss_pred ccccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEE
Confidence 34578999999999999999999975 68999999987532 12235678899999988 799999999999999999
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccC
Q 005224 447 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 526 (707)
Q Consensus 447 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~ 526 (707)
++||||+++|+|.+++.... .+++..++.++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+|+..
T Consensus 418 ~lV~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~g---IiHrDLKp~NILl~~~g~ikL~DFGla~~~ 492 (674)
T 3pfq_A 418 YFVMEYVNGGDLMYHIQQVG--RFKEPHAVFYAAEIAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKEN 492 (674)
T ss_dssp EEEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTS---EECCCCCSTTEEECSSSCEEECCCTTCEEC
T ss_pred EEEEeCcCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCC---eEeccCChhhEEEcCCCcEEEeecceeecc
Confidence 99999999999999997653 4999999999999999999999999 999999999999999999999999999864
Q ss_pred CCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCc
Q 005224 527 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 587 (707)
Q Consensus 527 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~elltG~~pf~~~~ 587 (707)
.... .......||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 493 ~~~~-------~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~ 546 (674)
T 3pfq_A 493 IWDG-------VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGED 546 (674)
T ss_dssp CCTT-------CCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred ccCC-------cccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCC
Confidence 3221 22345679999999999999999999999999999999999999997543
No 134
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.7e-41 Score=368.05 Aligned_cols=280 Identities=20% Similarity=0.297 Sum_probs=202.5
Q ss_pred HHHhcCCCccceEeeeCceEEEEEEe-CCCcEEEEEEeccCChhhHHHHHHHHHHHHccCCCcceeEEEEEEeC------
Q 005224 371 ALATNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE------ 443 (707)
Q Consensus 371 ~~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~------ 443 (707)
....++|++.+.||+|+||+||+|.. .+|+.||||++..... ...+|+++++.++||||+++++++...
T Consensus 3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~----~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~ 78 (383)
T 3eb0_A 3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR----YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPK 78 (383)
T ss_dssp ---CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHTTCCCTTBCCEEEEEEEC------
T ss_pred ccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc----hHHHHHHHHHHcCCCCccchhheeeecCccccc
Confidence 44567899999999999999999996 4799999999865432 234799999999999999999998443
Q ss_pred --------------------------------CeEEEEEecCCCCCHHHHHhh--cCCCCcCHHHHHHHHHHHHHHHHHH
Q 005224 444 --------------------------------GEQMLVYEFMSNGTLRDQLSA--KSKEPLGFAMRLSIALGSSRGILYL 489 (707)
Q Consensus 444 --------------------------------~~~~lV~E~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~ia~gL~yL 489 (707)
...++||||++ |+|.+.+.. .....+++..++.++.||++||+||
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~L 157 (383)
T 3eb0_A 79 PPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFI 157 (383)
T ss_dssp -------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 34889999997 588888764 3455799999999999999999999
Q ss_pred HhCCCCCeEecCCCCCCEEEc-CCCcEEEeeecccccCCCCCCCCccccceecccccCCCccchhhhccC-CCCCchhhH
Q 005224 490 HTEADPPVFHRDIKASNILLD-HKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTH-KLTDKSDVY 567 (707)
Q Consensus 490 H~~~~~~ivH~Dlkp~NILl~-~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~sDVw 567 (707)
|+.+ |+||||||+|||++ .++.+||+|||+|+...... ......||+.|+|||++.+. .++.++|||
T Consensus 158 H~~g---i~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~--------~~~~~~~t~~y~aPE~~~~~~~~~~~~Diw 226 (383)
T 3eb0_A 158 HSLG---ICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSE--------PSVAYICSRFYRAPELMLGATEYTPSIDLW 226 (383)
T ss_dssp HTTT---EECSCCCGGGEEEETTTTEEEECCCTTCEECCTTS--------CCCCCCCCSSCCCHHHHTTCSSCCTHHHHH
T ss_pred HHCc---CccCccCHHHEEEcCCCCcEEEEECCCCcccCCCC--------CCcCcccCCCccCHHHhcCCCCCCcchhhh
Confidence 9998 99999999999998 68999999999998664322 22345689999999999875 589999999
Q ss_pred HHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCC-CCCCHHHHHHHH
Q 005224 568 SLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETD-ARPSMSEVMREL 646 (707)
Q Consensus 568 S~Gvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~-~RPt~~~v~~~L 646 (707)
|+||++|||++|+.||................ +..+.+....+..-.. ... -|. ......
T Consensus 227 slG~il~ell~g~~pf~~~~~~~~~~~i~~~~-----------g~p~~~~~~~~~~~~~-~~~-~~~~~~~~~~------ 287 (383)
T 3eb0_A 227 SIGCVFGELILGKPLFSGETSIDQLVRIIQIM-----------GTPTKEQMIRMNPHYT-EVR-FPTLKAKDWR------ 287 (383)
T ss_dssp HHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHH-----------CCCCHHHHHHHCTTC---CC-CCCCCCCCHH------
T ss_pred hHHHHHHHHHhCCCCCCCCChHHHHHHHHHHh-----------CCCCHHHHHHhCcccc-ccc-CCccCcccHH------
Confidence 99999999999999997654422211111000 0001111000000000 000 000 000010
Q ss_pred HHhhhcCC-CCCCCCCccccCCCCCCCCCCCCCCcCCCCCCCCC
Q 005224 647 ESIWNMMP-ESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSS 689 (707)
Q Consensus 647 ~~~~~~~~-~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f~~ 689 (707)
..++ ..++.+.+||.+||++||++|+|++|+|+||||..
T Consensus 288 ----~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~ 327 (383)
T 3eb0_A 288 ----KILPEGTPSLAIDLLEQILRYEPDLRINPYEAMAHPFFDH 327 (383)
T ss_dssp ----HHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGHH
T ss_pred ----hhCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcCHHHHH
Confidence 1111 23344568999999999999999999999999964
No 135
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=1.5e-41 Score=360.21 Aligned_cols=258 Identities=26% Similarity=0.437 Sum_probs=206.7
Q ss_pred hcCCCccceEeeeCceEEEEEEeC-CCcE----EEEEEeccCC-hhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEE
Q 005224 374 TNNFNSSTQIGQGGYGKVYKGILP-DGTV----VAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQM 447 (707)
Q Consensus 374 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~----vavK~l~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~ 447 (707)
.++|++.+.||+|+||+||+|.+. +++. ||+|.+.... ....+.+.+|+.+++.++||||+++++++. .+..+
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~ 90 (325)
T 3kex_A 12 ETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQ 90 (325)
T ss_dssp TTTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEE
T ss_pred HhHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccE
Confidence 357888999999999999999964 4443 8888875432 222346778999999999999999999986 45689
Q ss_pred EEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCC
Q 005224 448 LVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAP 527 (707)
Q Consensus 448 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~ 527 (707)
+||||+++|+|.+++... ...+++..++.++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 91 ~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~ 166 (325)
T 3kex_A 91 LVTQYLPLGSLLDHVRQH-RGALGPQLLLNWGVQIAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLP 166 (325)
T ss_dssp EEEECCTTCBSHHHHHSS-GGGSCTTHHHHHHHHHHHHHHHHHHTT---CCCSCCSSTTEEESSSSCEEECSCSGGGGSC
T ss_pred EEEEeCCCCCHHHHHHHc-cccCCHHHHHHHHHHHHHHHHHHHhCC---CCCCccchheEEECCCCeEEECCCCcccccC
Confidence 999999999999999754 345889999999999999999999999 9999999999999999999999999998765
Q ss_pred CCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHhhcccchhhc
Q 005224 528 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVI 606 (707)
Q Consensus 528 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~ 606 (707)
.... ........|+..|+|||++.+..++.++|||||||++|||++ |+.||........ ... +.
T Consensus 167 ~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~-~~~---------~~ 231 (325)
T 3kex_A 167 PDDK-----QLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEV-PDL---------LE 231 (325)
T ss_dssp CCTT-----CCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHH-HHH---------HH
T ss_pred cccc-----cccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHH-HHH---------HH
Confidence 4321 122344567889999999999999999999999999999999 9999975433111 111 11
Q ss_pred cCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 005224 607 DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 651 (707)
Q Consensus 607 ~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~ 651 (707)
.......+..++..+.+++.+||+.+|.+||++.++++.|+.+..
T Consensus 232 ~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~ 276 (325)
T 3kex_A 232 KGERLAQPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMAR 276 (325)
T ss_dssp TTCBCCCCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTT
T ss_pred cCCCCCCCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 122233445566678899999999999999999999999988754
No 136
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=8.7e-42 Score=367.42 Aligned_cols=292 Identities=22% Similarity=0.268 Sum_probs=211.9
Q ss_pred cHHHHHHHhcCCCccceEeeeCceEEEEEEeCCCcEEEEEEeccCCh-----------hhHHHHHHHHHHHHccCCCcce
Q 005224 366 TYGEMALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSL-----------QGEKEFLTEIQFLSRLHHRNLV 434 (707)
Q Consensus 366 ~~~~l~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~-----------~~~~~~~~E~~~l~~l~H~nIv 434 (707)
...++....++|++.+.||+|+||.||+|...+|+.||||++..... ...+.+.+|++++++++||||+
T Consensus 13 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv 92 (362)
T 3pg1_A 13 LIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNIL 92 (362)
T ss_dssp HHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred HHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCcc
Confidence 35678888999999999999999999999988899999999864221 1236789999999999999999
Q ss_pred eEEEEEEeC-----CeEEEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEE
Q 005224 435 SLVGYCDEE-----GEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILL 509 (707)
Q Consensus 435 ~l~~~~~~~-----~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl 509 (707)
++++++... ...++||||++ |+|.+++... ...+++..++.++.||+.||.|||+.+ |+||||||+|||+
T Consensus 93 ~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~NIl~ 167 (362)
T 3pg1_A 93 GLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQ-RIVISPQHIQYFMYHILLGLHVLHEAG---VVHRDLHPGNILL 167 (362)
T ss_dssp CCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCT-TSCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEE
T ss_pred ceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHCc---CEecCCChHHEEE
Confidence 999998543 36899999997 6898888753 346999999999999999999999999 9999999999999
Q ss_pred cCCCcEEEeeecccccCCCCCCCCccccceecccccCCCccchhhhcc-CCCCCchhhHHHHHHHHHHHcCCCCCCCCch
Q 005224 510 DHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKN 588 (707)
Q Consensus 510 ~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDVwS~Gvll~elltG~~pf~~~~~ 588 (707)
+.++.+||+|||+++..... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.....
T Consensus 168 ~~~~~~kl~Dfg~~~~~~~~--------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~ 239 (362)
T 3pg1_A 168 ADNNDITICDFNLAREDTAD--------ANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTF 239 (362)
T ss_dssp CTTCCEEECCTTC-----------------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSH
T ss_pred cCCCCEEEEecCcccccccc--------cccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCH
Confidence 99999999999999754321 12334568899999999987 7799999999999999999999999976543
Q ss_pred hHHHHHHHhhcccchhhccCCCCCCChHHH-----HHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCcc
Q 005224 589 IVREVNIAYQSSMMFSVIDGNMGSYPSECV-----EKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEF 663 (707)
Q Consensus 589 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dl 663 (707)
.. ........ . ...+.+.. ....+.........|... . ....+..++...+|
T Consensus 240 ~~-~~~~i~~~------~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~----------~~~~~~~~~~~~~l 296 (362)
T 3pg1_A 240 YN-QLNKIVEV------V----GTPKIEDVVMFSSPSARDYLRNSLSNVPARA--W----------TAVVPTADPVALDL 296 (362)
T ss_dssp HH-HHHHHHHH------H----CCCCHHHHHHTSCHHHHHHTTTCCCCCCCCC--H----------HHHSTTSCHHHHHH
T ss_pred HH-HHHHHHHH------c----CCCChHHhhhccchhhhHHHHhhcccCChhh--H----------HhhCCCCCHHHHHH
Confidence 21 11111100 0 00000000 011111111111111110 0 11223344556789
Q ss_pred ccCCCCCCCCCCCCCCcCCCCCCCCCCCCC
Q 005224 664 INSEHTSKEETPPSSSSMLKHPYVSSDVSG 693 (707)
Q Consensus 664 l~~~L~~dP~~R~sa~e~L~Hp~f~~~~~~ 693 (707)
|.+||..||++|||++|+|+||||.+....
T Consensus 297 i~~~L~~dP~~Rpt~~ell~hp~f~~~~~~ 326 (362)
T 3pg1_A 297 IAKMLEFNPQRRISTEQALRHPYFESLFDP 326 (362)
T ss_dssp HHHHTCSSGGGSCCHHHHHTSGGGTTTCCG
T ss_pred HHHHhcCChhhCCCHHHHHcCchhhhccCc
Confidence 999999999999999999999999886543
No 137
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=6.6e-42 Score=374.22 Aligned_cols=285 Identities=25% Similarity=0.344 Sum_probs=194.9
Q ss_pred CCCc-cceEeeeCceEEEEEEeC---CCcEEEEEEeccCChhhHHHHHHHHHHHHccCCCcceeEEEEEEe--CCeEEEE
Q 005224 376 NFNS-STQIGQGGYGKVYKGILP---DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE--EGEQMLV 449 (707)
Q Consensus 376 ~~~~-~~~lG~G~~g~Vy~~~~~---~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~--~~~~~lV 449 (707)
.|++ .++||+|+||+||+|..+ +++.||||++..... ...+.+|+++++.++||||+++++++.. ....++|
T Consensus 21 ~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv 98 (405)
T 3rgf_A 21 LFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI--SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLL 98 (405)
T ss_dssp HEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC--CHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEE
T ss_pred hhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC--CHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEE
Confidence 4554 458999999999999965 578999999975432 3468899999999999999999999954 6789999
Q ss_pred EecCCCCCHHHHHhhc-------CCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEE----cCCCcEEEe
Q 005224 450 YEFMSNGTLRDQLSAK-------SKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILL----DHKFTAKVA 518 (707)
Q Consensus 450 ~E~~~~gsL~~~l~~~-------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl----~~~~~~kl~ 518 (707)
|||++ |+|.+++... ....+++..++.++.||+.||+|||+.+ |+||||||+|||+ +.++.+||+
T Consensus 99 ~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~kl~ 174 (405)
T 3rgf_A 99 FDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIA 174 (405)
T ss_dssp EECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECCSSTTTTCEEEC
T ss_pred EeCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC---EeCCCcCHHHeEEecCCCCCCcEEEE
Confidence 99996 5888888632 2235899999999999999999999999 9999999999999 778999999
Q ss_pred eecccccCCCCCCCCccccceecccccCCCccchhhhcc-CCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHh
Q 005224 519 DFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAY 597 (707)
Q Consensus 519 DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDVwS~Gvll~elltG~~pf~~~~~~~~~~~~~~ 597 (707)
|||+++....... .........||+.|+|||++.+ ..++.++|||||||++|||++|+.||.........
T Consensus 175 Dfg~a~~~~~~~~----~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~----- 245 (405)
T 3rgf_A 175 DMGFARLFNSPLK----PLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKT----- 245 (405)
T ss_dssp CTTCCC--------------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC----------
T ss_pred ECCCceecCCCCc----ccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccc-----
Confidence 9999987643211 1122345678999999999987 45899999999999999999999999654321100
Q ss_pred hcccchhhccCCCCCCChHHHHHHHHHH--------------------HHhcccCCCCCCCHHHHHHHHHHhhhcCCCCC
Q 005224 598 QSSMMFSVIDGNMGSYPSECVEKFIKLA--------------------LKCCQDETDARPSMSEVMRELESIWNMMPESD 657 (707)
Q Consensus 598 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~--------------------~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~ 657 (707)
...+..+....+.+.+ ...+...........+. + .......+
T Consensus 246 ------------~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~---~~~~~~~~ 307 (405)
T 3rgf_A 246 ------------SNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKY---M---EKHKVKPD 307 (405)
T ss_dssp -------------CCCCHHHHHHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHH---H---HTTTCCTT
T ss_pred ------------cccchHHHHHHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhh---H---hhcCCCCC
Confidence 0000111111111110 00011111111111111 1 11223335
Q ss_pred CCCCccccCCCCCCCCCCCCCCcCCCCCCCCCCCCC
Q 005224 658 TKTPEFINSEHTSKEETPPSSSSMLKHPYVSSDVSG 693 (707)
Q Consensus 658 ~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f~~~~~~ 693 (707)
..+.+||.+||++||++|+|++|+|+||||......
T Consensus 308 ~~~~~Ll~~~L~~dP~~R~ta~e~L~hp~f~~~~~~ 343 (405)
T 3rgf_A 308 SKAFHLLQKLLTMDPIKRITSEQAMQDPYFLEDPLP 343 (405)
T ss_dssp SHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTSSSCC
T ss_pred HHHHHHHHHHccCCcccCCCHHHHhcChhhccCCCC
Confidence 566789999999999999999999999999886554
No 138
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=1.4e-41 Score=368.63 Aligned_cols=203 Identities=24% Similarity=0.300 Sum_probs=174.9
Q ss_pred HHHhcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHccC-CC-----cceeEEEEEEeC
Q 005224 371 ALATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLH-HR-----NLVSLVGYCDEE 443 (707)
Q Consensus 371 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-H~-----nIv~l~~~~~~~ 443 (707)
....++|++.+.||+|+||+||+|... +++.||||++... .....++..|+++++.++ |+ +|+++++++...
T Consensus 50 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~ 128 (382)
T 2vx3_A 50 EKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK-KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFR 128 (382)
T ss_dssp CEETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEET
T ss_pred CEeeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc-HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccC
Confidence 334678999999999999999999965 7899999999753 333567788999988885 44 499999999999
Q ss_pred CeEEEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHh--CCCCCeEecCCCCCCEEEc--CCCcEEEee
Q 005224 444 GEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHT--EADPPVFHRDIKASNILLD--HKFTAKVAD 519 (707)
Q Consensus 444 ~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~--~~~~~ivH~Dlkp~NILl~--~~~~~kl~D 519 (707)
+..++||||++ |+|.+++.......+++..++.++.|++.||.|||+ .+ |+||||||+|||++ .++.+||+|
T Consensus 129 ~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~~~---ivHrDlkp~NIll~~~~~~~~kL~D 204 (382)
T 2vx3_A 129 NHLCLVFEMLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELS---IIHCDLKPENILLCNPKRSAIKIVD 204 (382)
T ss_dssp TEEEEEEECCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTSTTTC---EECCCCSGGGEEESSTTSCCEEECC
T ss_pred CceEEEEecCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccCCCC---EEcCCCCcccEEEecCCCCcEEEEe
Confidence 99999999995 599999987766679999999999999999999995 45 99999999999994 578899999
Q ss_pred ecccccCCCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCch
Q 005224 520 FGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKN 588 (707)
Q Consensus 520 FGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~elltG~~pf~~~~~ 588 (707)
||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||.....
T Consensus 205 FG~a~~~~~~----------~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~ 263 (382)
T 2vx3_A 205 FGSSCQLGQR----------IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANE 263 (382)
T ss_dssp CTTCEETTCC----------CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred ccCceecccc----------cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH
Confidence 9999876321 2345689999999999999999999999999999999999999976544
No 139
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=1.1e-41 Score=366.85 Aligned_cols=281 Identities=21% Similarity=0.348 Sum_probs=196.5
Q ss_pred hcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccC--ChhhHHHHHHHHHHHHccCCCcceeEEEEEEeC------C
Q 005224 374 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEG--SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE------G 444 (707)
Q Consensus 374 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~------~ 444 (707)
.++|+..+.||+|+||.||+|... +|+.||||++... .....+.+.+|+++++.++||||+++++++... .
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~ 107 (367)
T 2fst_X 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN 107 (367)
T ss_dssp ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCC
Confidence 468999999999999999999964 7899999998653 233456788999999999999999999999654 5
Q ss_pred eEEEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccc
Q 005224 445 EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSR 524 (707)
Q Consensus 445 ~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~ 524 (707)
..++|+||+ +++|.+++.. ..+++..++.++.||++||+|||+.+ |+||||||+|||++.++.+||+|||+++
T Consensus 108 ~~~lv~e~~-~~~L~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~g---ivH~Dlkp~NIll~~~~~~kL~DFG~a~ 180 (367)
T 2fst_X 108 DVYLVTHLM-GADLNNIVKC---QKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR 180 (367)
T ss_dssp CCEEEEECC-CEECC--------CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECC-----
T ss_pred eEEEEeccc-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHhhEEECCCCCEEEeeccccc
Confidence 679999999 7899998854 45999999999999999999999999 9999999999999999999999999998
Q ss_pred cCCCCCCCCccccceecccccCCCccchhhhcc-CCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhc-ccc
Q 005224 525 LAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQS-SMM 602 (707)
Q Consensus 525 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDVwS~Gvll~elltG~~pf~~~~~~~~~~~~~~~~-~~~ 602 (707)
.... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||...... +.+...... ...
T Consensus 181 ~~~~----------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-~~l~~i~~~~g~p 249 (367)
T 2fst_X 181 HTAD----------EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI-DQLKLILRLVGTP 249 (367)
T ss_dssp --------------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHHHCSC
T ss_pred cccc----------cCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCC
Confidence 6432 1234578999999999987 78999999999999999999999999765432 222221110 000
Q ss_pred -hhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcC
Q 005224 603 -FSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSM 681 (707)
Q Consensus 603 -~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~ 681 (707)
.... ......... +.+. .+...| +....+ .++..++.+.|||.+||+.||++|+|++|+
T Consensus 250 ~~~~~----~~~~~~~~~---~~~~-~~~~~~--~~~~~~----------~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~ 309 (367)
T 2fst_X 250 GAELL----KKISSESAR---NYIQ-SLTQMP--KMNFAN----------VFIGANPLAVDLLEKMLVLDSDKRITAAQA 309 (367)
T ss_dssp CHHHH----TTCCCHHHH---HHHH-TSCCCC--CCCHHH----------HTTTCCHHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred CHHHH----HHhhhHHHH---HHHh-ccCCCC--CCCHHH----------HCCCCCHHHHHHHHHhCCCCcccCcCHHHH
Confidence 0000 001111111 1111 111111 112221 223445566789999999999999999999
Q ss_pred CCCCCCCCCCC
Q 005224 682 LKHPYVSSDVS 692 (707)
Q Consensus 682 L~Hp~f~~~~~ 692 (707)
|+||||.....
T Consensus 310 L~hp~~~~~~~ 320 (367)
T 2fst_X 310 LAHAYFAQYHD 320 (367)
T ss_dssp HTSGGGTTTCC
T ss_pred hcChhhhhccC
Confidence 99999986543
No 140
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=2.8e-40 Score=349.29 Aligned_cols=265 Identities=22% Similarity=0.280 Sum_probs=211.4
Q ss_pred hcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCCh-hhHHHHHHHHHHHHccCCCcceeEEEEEEeCC--eEEEE
Q 005224 374 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG--EQMLV 449 (707)
Q Consensus 374 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~--~~~lV 449 (707)
.++|.+.+.||+|+||+||+|... +++.||||++..... ...+.+.+|++++++++||||+++++++.... ..++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 87 (319)
T 4euu_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI 87 (319)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred CCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEE
Confidence 357889999999999999999976 589999999975432 33567889999999999999999999997765 78999
Q ss_pred EecCCCCCHHHHHhhcC-CCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEE----cCCCcEEEeeecccc
Q 005224 450 YEFMSNGTLRDQLSAKS-KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILL----DHKFTAKVADFGLSR 524 (707)
Q Consensus 450 ~E~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl----~~~~~~kl~DFGla~ 524 (707)
|||+++++|.+++.... ...+++..++.++.|+++||+|||+.+ |+||||||+|||+ +.++.+||+|||+++
T Consensus 88 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~ 164 (319)
T 4euu_A 88 MEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR 164 (319)
T ss_dssp EECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEECTTSCEEEEECCCTTCE
T ss_pred EeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEEeccCCCCceEEEccCCCce
Confidence 99999999999997643 234999999999999999999999999 9999999999999 788889999999998
Q ss_pred cCCCCCCCCccccceecccccCCCccchhhhc--------cCCCCCchhhHHHHHHHHHHHcCCCCCCCCch---hHHHH
Q 005224 525 LAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFL--------THKLTDKSDVYSLGVVFLELLTGMQPISHGKN---IVREV 593 (707)
Q Consensus 525 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~--------~~~~s~~sDVwS~Gvll~elltG~~pf~~~~~---~~~~~ 593 (707)
...... ......||+.|+|||++. +..++.++|||||||++|||++|+.||..... .....
T Consensus 165 ~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~ 236 (319)
T 4euu_A 165 ELEDDE--------QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVM 236 (319)
T ss_dssp ECCTTC--------CBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHH
T ss_pred ecCCCC--------ceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHH
Confidence 764322 223456899999999986 57889999999999999999999999964222 11211
Q ss_pred HHHhhccc---chhh------------ccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 005224 594 NIAYQSSM---MFSV------------IDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 649 (707)
Q Consensus 594 ~~~~~~~~---~~~~------------~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~ 649 (707)
........ ...+ ..+.....+......+.+++.+|++.||++||++.|+++...+.
T Consensus 237 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~ 307 (319)
T 4euu_A 237 YKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDI 307 (319)
T ss_dssp HHHHHHCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHH
T ss_pred HHHhcCCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHH
Confidence 11111100 0000 00111235578888999999999999999999999999887653
No 141
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=2.1e-41 Score=359.91 Aligned_cols=285 Identities=24% Similarity=0.359 Sum_probs=209.3
Q ss_pred hcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCCh--hhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEE
Q 005224 374 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 450 (707)
Q Consensus 374 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~ 450 (707)
.++|++.+.||+|+||.||+|... +|+.||||++..... ...+.+.+|+++++.++||||+++++++...+..++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 103 (331)
T 4aaa_A 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVF 103 (331)
T ss_dssp GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEE
Confidence 357889999999999999999975 589999999865432 23456889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCC
Q 005224 451 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 530 (707)
Q Consensus 451 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~ 530 (707)
||+++++|.+++... ..+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 104 e~~~~~~l~~~~~~~--~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 178 (331)
T 4aaa_A 104 EFVDHTILDDLELFP--NGLDYQVVQKYLFQIINGIGFCHSHN---IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG 178 (331)
T ss_dssp ECCSEEHHHHHHHST--TCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCTTC-------
T ss_pred ecCCcchHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHHCC---EEccCcChheEEEcCCCcEEEEeCCCceeecCCc
Confidence 999999998887543 35999999999999999999999999 9999999999999999999999999997654321
Q ss_pred CCCccccceecccccCCCccchhhhccC-CCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCC
Q 005224 531 IEGIVPAHVSTVVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGN 609 (707)
Q Consensus 531 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~sDVwS~Gvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 609 (707)
.......||+.|+|||++.+. .++.++|||||||++|||++|+.||.................
T Consensus 179 -------~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~--------- 242 (331)
T 4aaa_A 179 -------EVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLG--------- 242 (331)
T ss_dssp ------------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHC---------
T ss_pred -------cccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhC---------
Confidence 122345689999999999875 789999999999999999999999976554322211110000
Q ss_pred CCCCChHHHHHHHHHHHH--hcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCCCCCCC
Q 005224 610 MGSYPSECVEKFIKLALK--CCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYV 687 (707)
Q Consensus 610 ~~~~~~~~~~~l~~l~~~--c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f 687 (707)
..+......+..-... ........+.... ...+..++...+|+.+||..||++|||++|+|+||||
T Consensus 243 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~f 310 (331)
T 4aaa_A 243 --NLIPRHQELFNKNPVFAGVRLPEIKEREPLE----------RRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFF 310 (331)
T ss_dssp --SCCHHHHHHHHHCGGGTTCCCCCCSSCCCHH----------HHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHH
T ss_pred --CCChhhhhHhhhccccccccCccccccchhh----------hcccchhHHHHHHHHHHhccCcccCCCHHHHhcCchh
Confidence 0111110000000000 0000001111111 1223344556689999999999999999999999999
Q ss_pred CCCC
Q 005224 688 SSDV 691 (707)
Q Consensus 688 ~~~~ 691 (707)
..+.
T Consensus 311 ~~~~ 314 (331)
T 4aaa_A 311 QMDG 314 (331)
T ss_dssp HGGG
T ss_pred ccCC
Confidence 8754
No 142
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=1.9e-41 Score=355.62 Aligned_cols=200 Identities=25% Similarity=0.431 Sum_probs=174.7
Q ss_pred hcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEec
Q 005224 374 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 452 (707)
Q Consensus 374 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E~ 452 (707)
.++|.+.+.||+|+||+||+|... +|+.||+|++........+.+.+|+++++.++||||+++++++.+.+..++||||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 87 (304)
T 2jam_A 8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQL 87 (304)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEc
Confidence 467889999999999999999975 7999999999865544556789999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEE---cCCCcEEEeeecccccCCCC
Q 005224 453 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILL---DHKFTAKVADFGLSRLAPVP 529 (707)
Q Consensus 453 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl---~~~~~~kl~DFGla~~~~~~ 529 (707)
+++++|.+++.... .+++..++.++.|++.||+|||+.+ |+||||||+||++ ++++.+||+|||+++.....
T Consensus 88 ~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~ 162 (304)
T 2jam_A 88 VSGGELFDRILERG--VYTEKDASLVIQQVLSAVKYLHENG---IVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG 162 (304)
T ss_dssp CCSCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTT---CCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCB
T ss_pred CCCccHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEecCCCCCCEEEccCCcceecCCC
Confidence 99999999997643 4899999999999999999999998 9999999999999 78899999999998754321
Q ss_pred CCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCc
Q 005224 530 DIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 587 (707)
Q Consensus 530 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~elltG~~pf~~~~ 587 (707)
......||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 163 ---------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~ 211 (304)
T 2jam_A 163 ---------IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEET 211 (304)
T ss_dssp ---------TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSC
T ss_pred ---------ccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCC
Confidence 1234568999999999999999999999999999999999999996543
No 143
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=6.6e-41 Score=346.67 Aligned_cols=257 Identities=27% Similarity=0.446 Sum_probs=184.7
Q ss_pred cCCCccceEeeeCceEEEEEEe-CCCcEEEEEEeccCCh---hhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEE
Q 005224 375 NNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 450 (707)
Q Consensus 375 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~ 450 (707)
++|++.+.||+|+||.||+|.. .+|+.||||++..... ...+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 11 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 90 (278)
T 3cok_A 11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVL 90 (278)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEEE
Confidence 5788999999999999999997 4799999999865322 12367899999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCC
Q 005224 451 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 530 (707)
Q Consensus 451 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~ 530 (707)
||+++++|.+++... ...+++..++.++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 91 e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~ 166 (278)
T 3cok_A 91 EMCHNGEMNRYLKNR-VKPFSENEARHFMHQIITGMLYLHSHG---ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPH 166 (278)
T ss_dssp ECCTTEEHHHHHHTC-SSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSSCCGGGEEECTTCCEEECCCTTCEECC---
T ss_pred ecCCCCcHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCCEEEEeecceeeccCCC
Confidence 999999999999754 346899999999999999999999998 9999999999999999999999999998654321
Q ss_pred CCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCCC
Q 005224 531 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 610 (707)
Q Consensus 531 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 610 (707)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||........ ....
T Consensus 167 -------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~----------~~~~----- 224 (278)
T 3cok_A 167 -------EKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNT----------LNKV----- 224 (278)
T ss_dssp --------------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC---------------C-----
T ss_pred -------CcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHH----------HHHH-----
Confidence 112335689999999999999999999999999999999999999964332100 0000
Q ss_pred CCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCCCCCCCCCC
Q 005224 611 GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSSD 690 (707)
Q Consensus 611 ~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f~~~ 690 (707)
...+. ..|. ..+....+++.+||..||++|||++|+|+||||...
T Consensus 225 ------------------~~~~~-~~~~----------------~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~ 269 (278)
T 3cok_A 225 ------------------VLADY-EMPS----------------FLSIEAKDLIHQLLRRNPADRLSLSSVLDHPFMSRN 269 (278)
T ss_dssp ------------------CSSCC-CCCT----------------TSCHHHHHHHHHHSCSSGGGSCCHHHHTTSTTTC--
T ss_pred ------------------hhccc-CCcc----------------ccCHHHHHHHHHHcccCHhhCCCHHHHhcCccccCC
Confidence 00000 0010 011223368888999999999999999999999865
Q ss_pred CC
Q 005224 691 VS 692 (707)
Q Consensus 691 ~~ 692 (707)
..
T Consensus 270 ~~ 271 (278)
T 3cok_A 270 SS 271 (278)
T ss_dssp --
T ss_pred CC
Confidence 43
No 144
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=9.6e-41 Score=355.25 Aligned_cols=265 Identities=25% Similarity=0.482 Sum_probs=216.6
Q ss_pred HhcCCCccceEeeeCceEEEEEEeC--------CCcEEEEEEeccCCh-hhHHHHHHHHHHHHcc-CCCcceeEEEEEEe
Q 005224 373 ATNNFNSSTQIGQGGYGKVYKGILP--------DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRL-HHRNLVSLVGYCDE 442 (707)
Q Consensus 373 ~~~~~~~~~~lG~G~~g~Vy~~~~~--------~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~ 442 (707)
..++|++.+.||+|+||+||+|... +++.||||++..... ...+.+.+|+++++++ +||||+++++++..
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~ 112 (334)
T 2pvf_A 33 PRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 112 (334)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred CHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEcc
Confidence 4578999999999999999999863 467899999976433 3356789999999999 89999999999999
Q ss_pred CCeEEEEEecCCCCCHHHHHhhcCC--------------CCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEE
Q 005224 443 EGEQMLVYEFMSNGTLRDQLSAKSK--------------EPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNIL 508 (707)
Q Consensus 443 ~~~~~lV~E~~~~gsL~~~l~~~~~--------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NIL 508 (707)
.+..++||||+++|+|.+++..... ..+++..++.++.||++||+|||+.+ |+||||||+||+
T Consensus 113 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIl 189 (334)
T 2pvf_A 113 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK---CIHRDLAARNVL 189 (334)
T ss_dssp SSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEE
T ss_pred CCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCccceEE
Confidence 9999999999999999999976432 34899999999999999999999999 999999999999
Q ss_pred EcCCCcEEEeeecccccCCCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc-CCCCCCCCc
Q 005224 509 LDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGK 587 (707)
Q Consensus 509 l~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~ellt-G~~pf~~~~ 587 (707)
++.++.+||+|||+++....... ........+|+.|+|||++.+..++.++|||||||++|||++ |+.||....
T Consensus 190 l~~~~~~kL~Dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~ 264 (334)
T 2pvf_A 190 VTENNVMKIADFGLARDINNIDY-----YKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP 264 (334)
T ss_dssp ECTTCCEEECCCTTCEECTTTSS-----EECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred EcCCCCEEEcccccccccccccc-----ccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCC
Confidence 99999999999999986643221 111233456788999999999999999999999999999999 999996543
Q ss_pred hhHHHHHHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCC
Q 005224 588 NIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPE 655 (707)
Q Consensus 588 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~ 655 (707)
.. +.... +..+.....+..++..+.+++..||+.+|.+||++.++++.|+.+......
T Consensus 265 ~~-~~~~~---------~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~~~~ 322 (334)
T 2pvf_A 265 VE-ELFKL---------LKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTTN 322 (334)
T ss_dssp HH-HHHHH---------HHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC-
T ss_pred HH-HHHHH---------HhcCCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhcccc
Confidence 21 11111 111222334556678899999999999999999999999999998775443
No 145
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=5.2e-41 Score=362.67 Aligned_cols=285 Identities=21% Similarity=0.325 Sum_probs=204.1
Q ss_pred hcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccC--ChhhHHHHHHHHHHHHccCCCcceeEEEEEEeCC------
Q 005224 374 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEG--SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG------ 444 (707)
Q Consensus 374 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~------ 444 (707)
.++|++.+.||+|+||+||+|... +++.||||++... .....+.+.+|+.+++.++||||+++++++...+
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 103 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 103 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence 468999999999999999999965 7899999998753 2334567889999999999999999999997654
Q ss_pred eEEEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccc
Q 005224 445 EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSR 524 (707)
Q Consensus 445 ~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~ 524 (707)
..++||||++ ++|.+.+.. .+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++
T Consensus 104 ~~~lv~e~~~-~~l~~~~~~----~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~ 175 (371)
T 2xrw_A 104 DVYIVMELMD-ANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR 175 (371)
T ss_dssp EEEEEEECCS-EEHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECCCCC--
T ss_pred ceEEEEEcCC-CCHHHHHhh----ccCHHHHHHHHHHHHHHHHHHHHCC---eecccCCHHHEEEcCCCCEEEEEeeccc
Confidence 7899999996 588888852 4889999999999999999999999 9999999999999999999999999998
Q ss_pred cCCCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchh
Q 005224 525 LAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFS 604 (707)
Q Consensus 525 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~ 604 (707)
..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||........+ ....
T Consensus 176 ~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~-~~i~------- 239 (371)
T 2xrw_A 176 TAGTS--------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQW-NKVI------- 239 (371)
T ss_dssp ----------------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHH-HHHH-------
T ss_pred ccccc--------cccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHH-HHHH-------
Confidence 65321 1223457899999999999999999999999999999999999999765543222 1111
Q ss_pred hccCCCCCCChHHHHHHHHHHHHhcccCCCCC-CCHHHHHHHHHHhhhcCCCC-------CCCCCccccCCCCCCCCCCC
Q 005224 605 VIDGNMGSYPSECVEKFIKLALKCCQDETDAR-PSMSEVMRELESIWNMMPES-------DTKTPEFINSEHTSKEETPP 676 (707)
Q Consensus 605 ~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~R-Pt~~~v~~~L~~~~~~~~~~-------~~~~~dll~~~L~~dP~~R~ 676 (707)
. ..+....+....+...........|... .++.+.... . .++.. +..+.+||.+||+.||++||
T Consensus 240 --~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~--~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~ 311 (371)
T 2xrw_A 240 --E-QLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPD---V--LFPADSEHNKLKASQARDLLSKMLVIDASKRI 311 (371)
T ss_dssp --C--CCCCCHHHHTTSCHHHHHHHHSSCCCCCCCHHHHSCG---G--GSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSC
T ss_pred --H-HhCCCCHHHHHHhhhHHHHHHhhCccccccchhhhccc---c--cCcccccccccccHHHHHHHHHHCcCChhhCC
Confidence 1 1111222222222222222222222211 122211100 0 00100 12345899999999999999
Q ss_pred CCCcCCCCCCCCCC
Q 005224 677 SSSSMLKHPYVSSD 690 (707)
Q Consensus 677 sa~e~L~Hp~f~~~ 690 (707)
|++|+|+||||...
T Consensus 312 t~~e~l~hp~~~~~ 325 (371)
T 2xrw_A 312 SVDEALQHPYINVW 325 (371)
T ss_dssp CHHHHHHSHHHHTT
T ss_pred CHHHHhCCcchhhh
Confidence 99999999999753
No 146
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=3.8e-41 Score=361.07 Aligned_cols=272 Identities=15% Similarity=0.171 Sum_probs=212.0
Q ss_pred hcCCCccceEeeeCceEEEEEEeCC---------CcEEEEEEeccCChhhHHHHHHHHHHHHccCCCccee---------
Q 005224 374 TNNFNSSTQIGQGGYGKVYKGILPD---------GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVS--------- 435 (707)
Q Consensus 374 ~~~~~~~~~lG~G~~g~Vy~~~~~~---------~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~--------- 435 (707)
.++|++.+.||+|+||+||+|.... ++.||||++... +.+.+|++++++++||||++
T Consensus 41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 115 (352)
T 2jii_A 41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTP 115 (352)
T ss_dssp SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCT
T ss_pred CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCC
Confidence 3678999999999999999999753 789999998754 36788999999999999987
Q ss_pred ------EEEEEEe-CCeEEEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEE
Q 005224 436 ------LVGYCDE-EGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNIL 508 (707)
Q Consensus 436 ------l~~~~~~-~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NIL 508 (707)
+++++.. .+..++||||+ +++|.+++.......+++..++.++.||+.||+|||+.+ |+||||||+|||
T Consensus 116 ~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dikp~NIl 191 (352)
T 2jii_A 116 LLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENE---YVHGNVTAENIF 191 (352)
T ss_dssp TCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTT---CBCSCCCGGGEE
T ss_pred ccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCCHHHEE
Confidence 6778876 67899999999 999999998764567999999999999999999999998 999999999999
Q ss_pred EcCCC--cEEEeeecccccCCCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCC
Q 005224 509 LDHKF--TAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 586 (707)
Q Consensus 509 l~~~~--~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~elltG~~pf~~~ 586 (707)
++.++ .+||+|||+++....................||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 192 ~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~ 271 (352)
T 2jii_A 192 VDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNC 271 (352)
T ss_dssp EETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGG
T ss_pred EcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccC
Confidence 99998 9999999999876532211111112223457999999999999999999999999999999999999999754
Q ss_pred chhHHHHHHHhh--cccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCC
Q 005224 587 KNIVREVNIAYQ--SSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPES 656 (707)
Q Consensus 587 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~ 656 (707)
............ ........... ......+..+.+++..||+.+|.+||++.++++.|+.+.......
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~~~ 341 (352)
T 2jii_A 272 LPNTEDIMKQKQKFVDKPGPFVGPC--GHWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDLRVS 341 (352)
T ss_dssp TTCHHHHHHHHHHHHHSCCCEECTT--SCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTCC
T ss_pred CcCHHHHHHHHHhccCChhhhhhhc--cccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHhcCCC
Confidence 321111111110 00000000000 001233578999999999999999999999999999988765433
No 147
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=3.8e-41 Score=358.21 Aligned_cols=288 Identities=20% Similarity=0.311 Sum_probs=210.8
Q ss_pred hcCCCccceEeeeCceEEEEEEe-C-CCcEEEEEEeccCChhhHHHHHHHHHHHHccCCC------cceeEEEEEEeCCe
Q 005224 374 TNNFNSSTQIGQGGYGKVYKGIL-P-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHR------NLVSLVGYCDEEGE 445 (707)
Q Consensus 374 ~~~~~~~~~lG~G~~g~Vy~~~~-~-~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~------nIv~l~~~~~~~~~ 445 (707)
.++|++.+.||+|+||+||+|.. . +++.||||++... ....+.+.+|+++++.++|+ +++++++++...+.
T Consensus 13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~ 91 (339)
T 1z57_A 13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV-DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGH 91 (339)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTE
T ss_pred cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC-CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCc
Confidence 46899999999999999999986 3 6899999999753 33456788999999988665 49999999999999
Q ss_pred EEEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcC--------------
Q 005224 446 QMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDH-------------- 511 (707)
Q Consensus 446 ~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~-------------- 511 (707)
.++||||+ +++|.+++......++++..++.++.|+++||+|||+.+ |+||||||+|||++.
T Consensus 92 ~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~ 167 (339)
T 1z57_A 92 ICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNK---LTHTDLKPENILFVQSDYTEAYNPKIKRD 167 (339)
T ss_dssp EEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESCCCEEEEEC----CE
T ss_pred EEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHCC---CcCCCCCHHHEEEeccccccccCCccccc
Confidence 99999999 889999998876667999999999999999999999999 999999999999987
Q ss_pred -----CCcEEEeeecccccCCCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCC
Q 005224 512 -----KFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 586 (707)
Q Consensus 512 -----~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~elltG~~pf~~~ 586 (707)
++.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 168 ~~~~~~~~~kl~Dfg~~~~~~~~----------~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~ 237 (339)
T 1z57_A 168 ERTLINPDIKVVDFGSATYDDEH----------HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTH 237 (339)
T ss_dssp EEEESCCCEEECCCSSCEETTSC----------CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred cccccCCCceEeeCcccccCccc----------cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCC
Confidence 678999999999864321 23456899999999999999999999999999999999999999755
Q ss_pred chhHHHHHHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcC-------CCCCCC
Q 005224 587 KNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMM-------PESDTK 659 (707)
Q Consensus 587 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~-------~~~~~~ 659 (707)
..... ..... .. ....|......... ...+..+....+......+......... ....+.
T Consensus 238 ~~~~~-~~~~~------~~----~~~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (339)
T 1z57_A 238 DSKEH-LAMME------RI----LGPLPKHMIQKTRK--RKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHER 304 (339)
T ss_dssp CHHHH-HHHHH------HH----HCSCCHHHHHHCSC--GGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHH
T ss_pred ChHHH-HHHHH------HH----hCCCCHHHHhhccc--hhHHhhccccccccccccchhhhcCcchhhhcccchhhHHH
Confidence 43211 11100 00 01122221111000 0000000000011111111111111000 001123
Q ss_pred CCccccCCCCCCCCCCCCCCcCCCCCCCCC
Q 005224 660 TPEFINSEHTSKEETPPSSSSMLKHPYVSS 689 (707)
Q Consensus 660 ~~dll~~~L~~dP~~R~sa~e~L~Hp~f~~ 689 (707)
+.+||.+||..||++|||++|+|+||||..
T Consensus 305 l~~li~~~L~~dP~~Rpt~~ell~hp~f~~ 334 (339)
T 1z57_A 305 LFDLIQKMLEYDPAKRITLREALKHPFFDL 334 (339)
T ss_dssp HHHHHHHHTCSSTTTSCCHHHHTTSGGGGG
T ss_pred HHHHHHHHhCcCcccccCHHHHhcCHHHHH
Confidence 457999999999999999999999999975
No 148
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=6.7e-41 Score=360.87 Aligned_cols=261 Identities=24% Similarity=0.378 Sum_probs=207.7
Q ss_pred HHHHHhcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCCh--------hhHHHHHHHHHHHHcc-CCCcceeEEE
Q 005224 369 EMALATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--------QGEKEFLTEIQFLSRL-HHRNLVSLVG 438 (707)
Q Consensus 369 ~l~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~--------~~~~~~~~E~~~l~~l-~H~nIv~l~~ 438 (707)
......++|++.+.||+|+||.||+|.+. +|+.||||++..... ...+.+.+|+.+++++ +||||+++++
T Consensus 88 ~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~ 167 (365)
T 2y7j_A 88 AAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLID 167 (365)
T ss_dssp HHHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEE
T ss_pred hhhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEE
Confidence 34445678999999999999999999985 799999999865331 1135678999999999 7999999999
Q ss_pred EEEeCCeEEEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEe
Q 005224 439 YCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVA 518 (707)
Q Consensus 439 ~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~ 518 (707)
++...+..++||||+++++|.+++... ..+++..++.++.||+.||.|||+.+ |+||||||+|||+++++.+||+
T Consensus 168 ~~~~~~~~~lv~e~~~g~~L~~~l~~~--~~l~~~~~~~i~~qi~~~L~~LH~~g---i~H~Dlkp~NIl~~~~~~ikl~ 242 (365)
T 2y7j_A 168 SYESSSFMFLVFDLMRKGELFDYLTEK--VALSEKETRSIMRSLLEAVSFLHANN---IVHRDLKPENILLDDNMQIRLS 242 (365)
T ss_dssp EEEBSSEEEEEECCCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEEC
T ss_pred EEeeCCEEEEEEEeCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEEE
Confidence 999999999999999999999999754 35899999999999999999999999 9999999999999999999999
Q ss_pred eecccccCCCCCCCCccccceecccccCCCccchhhhcc------CCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHH
Q 005224 519 DFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT------HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVRE 592 (707)
Q Consensus 519 DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~s~~sDVwS~Gvll~elltG~~pf~~~~~~~~~ 592 (707)
|||++....... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||........
T Consensus 243 DfG~~~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~- 313 (365)
T 2y7j_A 243 DFGFSCHLEPGE--------KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILM- 313 (365)
T ss_dssp CCTTCEECCTTC--------CBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHH-
T ss_pred ecCcccccCCCc--------ccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHHH-
Confidence 999998764321 2234578999999999864 3588899999999999999999999965432111
Q ss_pred HHHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCC
Q 005224 593 VNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKE 672 (707)
Q Consensus 593 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP 672 (707)
.. .+..... ++.... ....+....+||.+||..||
T Consensus 314 ~~----------------------------~i~~~~~------~~~~~~-----------~~~~~~~~~~li~~~L~~dP 348 (365)
T 2y7j_A 314 LR----------------------------MIMEGQY------QFSSPE-----------WDDRSSTVKDLISRLLQVDP 348 (365)
T ss_dssp HH----------------------------HHHHTCC------CCCHHH-----------HSSSCHHHHHHHHHHSCSST
T ss_pred HH----------------------------HHHhCCC------CCCCcc-----------cccCCHHHHHHHHHHcCCCh
Confidence 00 0000000 000000 01122234578899999999
Q ss_pred CCCCCCCcCCCCCCCC
Q 005224 673 ETPPSSSSMLKHPYVS 688 (707)
Q Consensus 673 ~~R~sa~e~L~Hp~f~ 688 (707)
++|||++|+|+||||.
T Consensus 349 ~~Rps~~ell~hp~f~ 364 (365)
T 2y7j_A 349 EARLTAEQALQHPFFE 364 (365)
T ss_dssp TTSCCHHHHHHSGGGC
T ss_pred hHCcCHHHHhcCcccC
Confidence 9999999999999996
No 149
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=9.4e-42 Score=366.16 Aligned_cols=201 Identities=27% Similarity=0.346 Sum_probs=172.4
Q ss_pred hcCCCccceEeeeCceEEEEEEe----CCCcEEEEEEeccCC----hhhHHHHHHHHHHHHcc-CCCcceeEEEEEEeCC
Q 005224 374 TNNFNSSTQIGQGGYGKVYKGIL----PDGTVVAVKRAQEGS----LQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEG 444 (707)
Q Consensus 374 ~~~~~~~~~lG~G~~g~Vy~~~~----~~~~~vavK~l~~~~----~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~ 444 (707)
.++|++.+.||+|+||+||+|.. .+++.||||++.... ....+.+.+|+++++.+ +||||+++++++...+
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 132 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET 132 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence 35788999999999999999997 378999999987532 12234677899999999 6999999999999999
Q ss_pred eEEEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccc
Q 005224 445 EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSR 524 (707)
Q Consensus 445 ~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~ 524 (707)
..++||||+++|+|.+++.... .+++..++.++.||++||.|||+.+ |+||||||+|||++.++.+||+|||+++
T Consensus 133 ~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~DfG~a~ 207 (355)
T 1vzo_A 133 KLHLILDYINGGELFTHLSQRE--RFTEHEVQIYVGEIVLALEHLHKLG---IIYRDIKLENILLDSNGHVVLTDFGLSK 207 (355)
T ss_dssp EEEEEECCCCSCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEESCSSEEE
T ss_pred eEEEEeecCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCcEEEeeCCCCe
Confidence 9999999999999999997643 5899999999999999999999998 9999999999999999999999999998
Q ss_pred cCCCCCCCCccccceecccccCCCccchhhhcc--CCCCCchhhHHHHHHHHHHHcCCCCCCC
Q 005224 525 LAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT--HKLTDKSDVYSLGVVFLELLTGMQPISH 585 (707)
Q Consensus 525 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~s~~sDVwS~Gvll~elltG~~pf~~ 585 (707)
...... ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||..
T Consensus 208 ~~~~~~------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~ 264 (355)
T 1vzo_A 208 EFVADE------TERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTV 264 (355)
T ss_dssp ECCGGG------GGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSC
T ss_pred ecccCC------CCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCcc
Confidence 653221 122334579999999999986 4578999999999999999999999964
No 150
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=1.7e-40 Score=350.79 Aligned_cols=269 Identities=27% Similarity=0.412 Sum_probs=214.1
Q ss_pred CCccceEeeeCceEEEEEEeC-----CCcEEEEEEeccCCh-hhHHHHHHHHHHHHccCCCcceeEEEEEEeC--CeEEE
Q 005224 377 FNSSTQIGQGGYGKVYKGILP-----DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE--GEQML 448 (707)
Q Consensus 377 ~~~~~~lG~G~~g~Vy~~~~~-----~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~--~~~~l 448 (707)
|++.+.||+|+||+||++.++ +++.||||++..... ...+.+.+|++++++++||||+++++++.+. ...++
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 112 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQL 112 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEE
Confidence 388999999999999998752 688999999986533 3356789999999999999999999999874 67899
Q ss_pred EEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCC
Q 005224 449 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 528 (707)
Q Consensus 449 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~ 528 (707)
||||+++|+|.+++... .+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++....
T Consensus 113 v~e~~~~~~L~~~l~~~---~~~~~~~~~i~~~l~~~l~~LH~~~---ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~ 186 (318)
T 3lxp_A 113 VMEYVPLGSLRDYLPRH---SIGLAQLLLFAQQICEGMAYLHAQH---YIHRDLAARNVLLDNDRLVKIGDFGLAKAVPE 186 (318)
T ss_dssp EECCCTTCBHHHHGGGS---CCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCGGGCEECCT
T ss_pred EEecccCCcHHHHHhhC---CCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCchheEEEcCCCCEEECCccccccccc
Confidence 99999999999999654 3899999999999999999999999 99999999999999999999999999987653
Q ss_pred CCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHH----HHhhcccchh
Q 005224 529 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVN----IAYQSSMMFS 604 (707)
Q Consensus 529 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~elltG~~pf~~~~~~~~~~~----~~~~~~~~~~ 604 (707)
... .........+|..|+|||++.+..++.++|||||||++|||++|+.||........... ..........
T Consensus 187 ~~~----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (318)
T 3lxp_A 187 GHE----YYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTE 262 (318)
T ss_dssp TCS----EEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHH
T ss_pred ccc----ccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHH
Confidence 221 01123344578889999999999999999999999999999999999864322110000 0000000111
Q ss_pred -hccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCC
Q 005224 605 -VIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPE 655 (707)
Q Consensus 605 -~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~ 655 (707)
+........+..++..+.+++.+||+.+|.+||++.++++.|+.+.+.+..
T Consensus 263 ~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~~ 314 (318)
T 3lxp_A 263 LLERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQG 314 (318)
T ss_dssp HHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHC
T ss_pred HHhcccCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhhcc
Confidence 122233445667778999999999999999999999999999998776543
No 151
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.3e-40 Score=381.66 Aligned_cols=262 Identities=26% Similarity=0.430 Sum_probs=211.2
Q ss_pred cCCCccc-eEeeeCceEEEEEEeC---CCcEEEEEEeccCC-hhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEE
Q 005224 375 NNFNSST-QIGQGGYGKVYKGILP---DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 449 (707)
Q Consensus 375 ~~~~~~~-~lG~G~~g~Vy~~~~~---~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV 449 (707)
+++.+.+ .||+|+||.||+|.++ ++..||||+++... ....+++.+|+++|++++||||++++++|.. +..++|
T Consensus 335 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv 413 (613)
T 2ozo_A 335 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLV 413 (613)
T ss_dssp TSEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEE
T ss_pred cceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEE
Confidence 3444444 7999999999999864 56789999998643 2346789999999999999999999999976 568999
Q ss_pred EecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCC
Q 005224 450 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 529 (707)
Q Consensus 450 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~ 529 (707)
|||+++|+|.+++... ...+++..++.++.||++||+|||+++ |+||||||+|||+++++.+||+|||+++.....
T Consensus 414 ~E~~~~g~L~~~l~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~~---iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~ 489 (613)
T 2ozo_A 414 MEMAGGGPLHKFLVGK-REEIPVSNVAELLHQVSMGMKYLEEKN---FVHRNLAARNVLLVNRHYAKISDFGLSKALGAD 489 (613)
T ss_dssp EECCTTCBHHHHHTTC-TTTSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCCSTTTTCC--
T ss_pred EEeCCCCcHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHHCC---EEcCcCCHHHEEEcCCCcEEEeeccCcccccCC
Confidence 9999999999999654 446999999999999999999999998 999999999999999999999999999876432
Q ss_pred CCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHhhcccchhhccC
Q 005224 530 DIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDG 608 (707)
Q Consensus 530 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 608 (707)
... ........+++.|+|||++.+..++.++|||||||++|||++ |+.||....... .. ..+..+
T Consensus 490 ~~~----~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~-~~---------~~i~~~ 555 (613)
T 2ozo_A 490 DSY----YTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE-VM---------AFIEQG 555 (613)
T ss_dssp ----------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHH-HH---------HHHHTT
T ss_pred Cce----eeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHH-HH---------HHHHcC
Confidence 211 111122345789999999999999999999999999999998 999997654321 11 112223
Q ss_pred CCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCC
Q 005224 609 NMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPE 655 (707)
Q Consensus 609 ~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~ 655 (707)
.....+..++..+.+++..||+.+|++||++.++++.|+.++.....
T Consensus 556 ~~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~~~~ 602 (613)
T 2ozo_A 556 KRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLAS 602 (613)
T ss_dssp CCCCCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHHHHSC
T ss_pred CCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHhcc
Confidence 34456677888999999999999999999999999999998765433
No 152
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=6.4e-41 Score=355.50 Aligned_cols=274 Identities=27% Similarity=0.387 Sum_probs=216.9
Q ss_pred hcCCCccceEeeeCceEEEEEEe-----CCCcEEEEEEeccCChhhHHHHHHHHHHHHccCCCcceeEEEEEE--eCCeE
Q 005224 374 TNNFNSSTQIGQGGYGKVYKGIL-----PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCD--EEGEQ 446 (707)
Q Consensus 374 ~~~~~~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~--~~~~~ 446 (707)
.++|+..+.||+|+||.||+|.+ .+++.||||++........+.+.+|++++++++|+||+++++++. .....
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 101 (327)
T 3lxl_A 22 ERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSL 101 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEE
T ss_pred hhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceE
Confidence 46788999999999999999984 368899999998776666778999999999999999999999986 45678
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccC
Q 005224 447 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 526 (707)
Q Consensus 447 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~ 526 (707)
++||||+++++|.+++.... ..+++..++.++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~ 177 (327)
T 3lxl_A 102 RLVMEYLPSGCLRDFLQRHR-ARLDASRLLLYSSQICKGMEYLGSRR---CVHRDLAARNILVESEAHVKIADFGLAKLL 177 (327)
T ss_dssp EEEEECCTTCBHHHHHHHHG-GGCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEEECCGGGCEEC
T ss_pred EEEEeecCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCChhhEEECCCCCEEEcccccceec
Confidence 99999999999999997643 25899999999999999999999998 999999999999999999999999999876
Q ss_pred CCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHH-HHh----hccc
Q 005224 527 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVN-IAY----QSSM 601 (707)
Q Consensus 527 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~elltG~~pf~~~~~~~~~~~-~~~----~~~~ 601 (707)
...... ........||..|+|||++.+..++.++|||||||++|||++|+.||........... ... ....
T Consensus 178 ~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 253 (327)
T 3lxl_A 178 PLDKDY----YVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRL 253 (327)
T ss_dssp CTTCSE----EECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHH
T ss_pred ccCCcc----ceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHH
Confidence 433211 1122334578889999999999999999999999999999999999864322110000 000 0001
Q ss_pred chhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCC
Q 005224 602 MFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPE 655 (707)
Q Consensus 602 ~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~ 655 (707)
...+..+.....+..++..+.+++.+|++.+|.+||++.++++.|+.++.....
T Consensus 254 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~~ 307 (327)
T 3lxl_A 254 LELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSRG 307 (327)
T ss_dssp HHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC------
T ss_pred HHHhhcccCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhhcC
Confidence 111222333445667788899999999999999999999999999988765543
No 153
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=1.3e-40 Score=350.55 Aligned_cols=262 Identities=24% Similarity=0.339 Sum_probs=199.5
Q ss_pred hcCCCccceEeeeCceEEEEEEe-CCCcEEEEEEeccCChh---hHHHHHHHHHHHHccCCCcceeEEEEEEeCC----e
Q 005224 374 TNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQ---GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG----E 445 (707)
Q Consensus 374 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~---~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~----~ 445 (707)
.++|++.+.||+|+||+||+|.. .+++.||||++...... ....+.+|++++++++||||+++++++.... .
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~ 90 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL 90 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEE
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcc
Confidence 46899999999999999999996 57899999999764332 2457889999999999999999999986654 3
Q ss_pred EEEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeeccccc
Q 005224 446 QMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRL 525 (707)
Q Consensus 446 ~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~ 525 (707)
.++||||+++++|.+++.... .+++..++.++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.
T Consensus 91 ~~lv~e~~~g~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~ 165 (311)
T 3ork_A 91 PYIVMEYVDGVTLRDIVHTEG--PMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARA 165 (311)
T ss_dssp EEEEEECCCEEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEETTSCEEECCCSCC--
T ss_pred cEEEEecCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---CCcCCCCHHHEEEcCCCCEEEeeccCccc
Confidence 499999999999999997643 5899999999999999999999999 99999999999999999999999999986
Q ss_pred CCCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhh
Q 005224 526 APVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSV 605 (707)
Q Consensus 526 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~ 605 (707)
....... ........||+.|+|||++.+..++.++|||||||++|||++|+.||............ ........
T Consensus 166 ~~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~-~~~~~~~~- 239 (311)
T 3ork_A 166 IADSGNS----VTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQH-VREDPIPP- 239 (311)
T ss_dssp --------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH-HHCCCCCH-
T ss_pred ccccccc----cccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHH-hcCCCCCc-
Confidence 5432211 11223456899999999999999999999999999999999999999765442221111 11100000
Q ss_pred ccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHH-HHHHHhhh
Q 005224 606 IDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVM-RELESIWN 651 (707)
Q Consensus 606 ~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~-~~L~~~~~ 651 (707)
......++..+.+++.+|++.+|.+||+..+++ ..+.....
T Consensus 240 -----~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~ 281 (311)
T 3ork_A 240 -----SARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHN 281 (311)
T ss_dssp -----HHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHT
T ss_pred -----ccccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHHhc
Confidence 001123557789999999999999999666544 45554433
No 154
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=5.6e-41 Score=356.75 Aligned_cols=266 Identities=24% Similarity=0.398 Sum_probs=216.4
Q ss_pred HHHHHhcCCCccceEeeeCceEEEEEEeC-CC-----cEEEEEEeccCCh-hhHHHHHHHHHHHHcc-CCCcceeEEEEE
Q 005224 369 EMALATNNFNSSTQIGQGGYGKVYKGILP-DG-----TVVAVKRAQEGSL-QGEKEFLTEIQFLSRL-HHRNLVSLVGYC 440 (707)
Q Consensus 369 ~l~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~-----~~vavK~l~~~~~-~~~~~~~~E~~~l~~l-~H~nIv~l~~~~ 440 (707)
++....++|+..+.||+|+||+||+|... ++ +.||+|.+..... ...+.+.+|+++++.+ +||||+++++++
T Consensus 40 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~ 119 (333)
T 2i1m_A 40 KWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGAC 119 (333)
T ss_dssp GGBCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred cccCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEE
Confidence 45556788999999999999999999964 22 4799999976433 3456789999999999 899999999999
Q ss_pred EeCCeEEEEEecCCCCCHHHHHhhcC------------CCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEE
Q 005224 441 DEEGEQMLVYEFMSNGTLRDQLSAKS------------KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNIL 508 (707)
Q Consensus 441 ~~~~~~~lV~E~~~~gsL~~~l~~~~------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NIL 508 (707)
...+..++||||+++|+|.+++.... ...+++..++.++.|++.||+|||+.+ |+||||||+|||
T Consensus 120 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~NIl 196 (333)
T 2i1m_A 120 THGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKN---CIHRDVAARNVL 196 (333)
T ss_dssp CSSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGCE
T ss_pred ecCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCC---cccCCcccceEE
Confidence 99999999999999999999997532 345899999999999999999999998 999999999999
Q ss_pred EcCCCcEEEeeecccccCCCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc-CCCCCCCCc
Q 005224 509 LDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGK 587 (707)
Q Consensus 509 l~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~ellt-G~~pf~~~~ 587 (707)
++.++.+||+|||+++....... ........+|+.|+|||++.+..++.++|||||||++|||++ |..||....
T Consensus 197 ~~~~~~~kl~Dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~ 271 (333)
T 2i1m_A 197 LTNGHVAKIGDFGLARDIMNDSN-----YIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGIL 271 (333)
T ss_dssp EEGGGEEEBCCCGGGCCGGGCTT-----SEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC
T ss_pred ECCCCeEEECccccccccccccc-----eeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccc
Confidence 99999999999999986533211 112234557889999999999999999999999999999999 999997543
Q ss_pred hhHHHHHHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 005224 588 NIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 651 (707)
Q Consensus 588 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~ 651 (707)
......... . .......+..++..+.+++..||+.+|.+||++.++++.|+.+..
T Consensus 272 ~~~~~~~~~-~--------~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~ 326 (333)
T 2i1m_A 272 VNSKFYKLV-K--------DGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQ 326 (333)
T ss_dssp SSHHHHHHH-H--------HTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred hhHHHHHHH-h--------cCCCCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHH
Confidence 322111111 1 111122344456788999999999999999999999999988754
No 155
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=6.3e-41 Score=348.77 Aligned_cols=252 Identities=23% Similarity=0.390 Sum_probs=208.1
Q ss_pred hcCCCccceEeeeCceEEEEEEeC-CC-------cEEEEEEeccCChhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCe
Q 005224 374 TNNFNSSTQIGQGGYGKVYKGILP-DG-------TVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGE 445 (707)
Q Consensus 374 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~-------~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~ 445 (707)
.++|.+.+.||+|+||+||+|... ++ +.||+|++........+.+.+|++++++++||||+++++++...+.
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 86 (289)
T 4fvq_A 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDE 86 (289)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTC
T ss_pred hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCC
Confidence 457888999999999999999864 33 5799999987666667889999999999999999999999999999
Q ss_pred EEEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCc--------EEE
Q 005224 446 QMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFT--------AKV 517 (707)
Q Consensus 446 ~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~--------~kl 517 (707)
.++||||+++|+|.+++.... ..+++..++.++.|+++||+|||+.+ |+||||||+|||++.++. +||
T Consensus 87 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~~~~~kl 162 (289)
T 4fvq_A 87 NILVQEFVKFGSLDTYLKKNK-NCINILWKLEVAKQLAAAMHFLEENT---LIHGNVCAKNILLIREEDRKTGNPPFIKL 162 (289)
T ss_dssp CEEEEECCTTCBHHHHHHHTG-GGCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEEECCBGGGTBCCEEEE
T ss_pred CEEEEECCCCCCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHhhCC---eECCCcCcceEEEecCCcccccccceeee
Confidence 999999999999999997643 34899999999999999999999999 999999999999998887 999
Q ss_pred eeecccccCCCCCCCCccccceecccccCCCccchhhhcc-CCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHH
Q 005224 518 ADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIA 596 (707)
Q Consensus 518 ~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDVwS~Gvll~elltG~~pf~~~~~~~~~~~~~ 596 (707)
+|||++..... .....||+.|+|||++.+ ..++.++|||||||++|||++|..|+....+........
T Consensus 163 ~Dfg~~~~~~~-----------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~~ 231 (289)
T 4fvq_A 163 SDPGISITVLP-----------KDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFY 231 (289)
T ss_dssp CCCCSCTTTSC-----------HHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHH
T ss_pred ccCcccccccC-----------ccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHHHHh
Confidence 99999875421 123457899999999987 779999999999999999999665554443322222111
Q ss_pred hhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 005224 597 YQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 651 (707)
Q Consensus 597 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~ 651 (707)
.. ....+...+..+.+++.+||+.+|.+||++.++++.|+++..
T Consensus 232 ~~-----------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~ 275 (289)
T 4fvq_A 232 ED-----------RHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFT 275 (289)
T ss_dssp HT-----------TCCCCCCSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC-
T ss_pred hc-----------cCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcC
Confidence 11 111223334568899999999999999999999999998765
No 156
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=8e-41 Score=352.35 Aligned_cols=270 Identities=26% Similarity=0.440 Sum_probs=209.3
Q ss_pred HHHHHHhcCCCccceEeeeCceEEEEEEeC----CCcEEEEEEeccCC--hhhHHHHHHHHHHHHccCCCcceeEEEEEE
Q 005224 368 GEMALATNNFNSSTQIGQGGYGKVYKGILP----DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCD 441 (707)
Q Consensus 368 ~~l~~~~~~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~ 441 (707)
+++....++|.+.+.||+|+||.||+|... +++.||||++.... ....+.+.+|+.++++++||||+++++++.
T Consensus 27 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~ 106 (313)
T 3brb_A 27 EDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCI 106 (313)
T ss_dssp TTTBCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEE
T ss_pred HhcccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEe
Confidence 445556778999999999999999999853 34589999987543 333467899999999999999999999997
Q ss_pred eCC-----eEEEEEecCCCCCHHHHHhh----cCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCC
Q 005224 442 EEG-----EQMLVYEFMSNGTLRDQLSA----KSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHK 512 (707)
Q Consensus 442 ~~~-----~~~lV~E~~~~gsL~~~l~~----~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~ 512 (707)
..+ ..++||||+++|+|.+++.. .....+++..++.++.|+++||.|||+.+ |+||||||+||+++.+
T Consensus 107 ~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dikp~NIli~~~ 183 (313)
T 3brb_A 107 EMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRN---FLHRDLAARNCMLRDD 183 (313)
T ss_dssp C-------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTT---CCCCCCSGGGEEECTT
T ss_pred eccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCcceEEEcCC
Confidence 655 35999999999999999854 23456999999999999999999999998 9999999999999999
Q ss_pred CcEEEeeecccccCCCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc-CCCCCCCCchhHH
Q 005224 513 FTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVR 591 (707)
Q Consensus 513 ~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~ellt-G~~pf~~~~~~~~ 591 (707)
+.+||+|||+++....... ........+++.|+|||.+.+..++.++|||||||++|||++ |..||........
T Consensus 184 ~~~kl~Dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~ 258 (313)
T 3brb_A 184 MTVCVADFGLSKKIYSGDY-----YRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEM 258 (313)
T ss_dssp SCEEECSCSCC---------------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGH
T ss_pred CcEEEeecCcceecccccc-----cCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHHH
Confidence 9999999999986543221 112233456889999999999999999999999999999999 8888865443211
Q ss_pred HHHHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCC
Q 005224 592 EVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPE 655 (707)
Q Consensus 592 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~ 655 (707)
...+..+.....+..++..+.+++.+||+.+|.+||++.++++.|+.+....++
T Consensus 259 ----------~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~lp~ 312 (313)
T 3brb_A 259 ----------YDYLLHGHRLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESLPD 312 (313)
T ss_dssp ----------HHHHHTTCCCCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC--
T ss_pred ----------HHHHHcCCCCCCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcCC
Confidence 111222233345566778899999999999999999999999999999887664
No 157
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=1e-40 Score=349.45 Aligned_cols=269 Identities=25% Similarity=0.402 Sum_probs=211.6
Q ss_pred hcCCCccceEeeeCceEEEEEEe-----CCCcEEEEEEeccCCh-hhHHHHHHHHHHHHccCCCcceeEEEEEEeC--Ce
Q 005224 374 TNNFNSSTQIGQGGYGKVYKGIL-----PDGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE--GE 445 (707)
Q Consensus 374 ~~~~~~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~--~~ 445 (707)
..+|+..+.||+|+||.||+|.+ .+++.||||++..... ...+.+.+|+++++.++||||+++++++... ..
T Consensus 20 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 99 (302)
T 4e5w_A 20 KRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNG 99 (302)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CC
T ss_pred hhhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCce
Confidence 34588899999999999999984 3689999999975432 3346789999999999999999999999876 67
Q ss_pred EEEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeeccccc
Q 005224 446 QMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRL 525 (707)
Q Consensus 446 ~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~ 525 (707)
.++||||+++|+|.+++.... ..+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++.
T Consensus 100 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~ 175 (302)
T 4e5w_A 100 IKLIMEFLPSGSLKEYLPKNK-NKINLKQQLKYAVQICKGMDYLGSRQ---YVHRDLAARNVLVESEHQVKIGDFGLTKA 175 (302)
T ss_dssp EEEEEECCTTCBHHHHHHHHT-TTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEEECCCTTCEE
T ss_pred EEEEEEeCCCCcHHHHHHhcc-ccCCHHHHHHHHHHHHHHHHHhhcCC---cccCCCchheEEEcCCCCEEECccccccc
Confidence 899999999999999996543 45899999999999999999999999 99999999999999999999999999987
Q ss_pred CCCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHH-----hhcc
Q 005224 526 APVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIA-----YQSS 600 (707)
Q Consensus 526 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~elltG~~pf~~~~~~~~~~~~~-----~~~~ 600 (707)
....... ........||..|+|||++.+..++.++|||||||++|||++|..|+............. ....
T Consensus 176 ~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 251 (302)
T 4e5w_A 176 IETDKEY----YTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTR 251 (302)
T ss_dssp CCTTCCE----EECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHH
T ss_pred ccCCCcc----eeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHH
Confidence 6543210 122334567888999999999999999999999999999999998864321110000000 0000
Q ss_pred cchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhh
Q 005224 601 MMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIW 650 (707)
Q Consensus 601 ~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~ 650 (707)
....+..+.....+..++..+.+++.+||+.+|.+||++.++++.|+.+.
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 252 LVNTLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp HHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHhccCCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 01112223334456677788999999999999999999999999998764
No 158
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=8.4e-41 Score=352.35 Aligned_cols=271 Identities=25% Similarity=0.423 Sum_probs=220.2
Q ss_pred ccHHHHHHHhcCCCccceEeeeCceEEEEEEe------CCCcEEEEEEeccCChh-hHHHHHHHHHHHHcc-CCCcceeE
Q 005224 365 FTYGEMALATNNFNSSTQIGQGGYGKVYKGIL------PDGTVVAVKRAQEGSLQ-GEKEFLTEIQFLSRL-HHRNLVSL 436 (707)
Q Consensus 365 ~~~~~l~~~~~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~l~~~~~~-~~~~~~~E~~~l~~l-~H~nIv~l 436 (707)
+...++....++|++.+.||+|+||+||+|.+ .+++.||||++...... ..+.+.+|+++++++ +||||+++
T Consensus 17 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~ 96 (316)
T 2xir_A 17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 96 (316)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred ccccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeE
Confidence 34455666678999999999999999999984 35689999999764433 346789999999999 79999999
Q ss_pred EEEEEeCC-eEEEEEecCCCCCHHHHHhhcCC--------------CCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecC
Q 005224 437 VGYCDEEG-EQMLVYEFMSNGTLRDQLSAKSK--------------EPLGFAMRLSIALGSSRGILYLHTEADPPVFHRD 501 (707)
Q Consensus 437 ~~~~~~~~-~~~lV~E~~~~gsL~~~l~~~~~--------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~D 501 (707)
++++...+ ..++||||+++|+|.+++..... ..+++..++.++.|+++||.|||+.+ |+|||
T Consensus 97 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~H~d 173 (316)
T 2xir_A 97 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRD 173 (316)
T ss_dssp EEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTT---CCCSC
T ss_pred EEEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCC---ccccc
Confidence 99997654 58999999999999999976442 23899999999999999999999998 99999
Q ss_pred CCCCCEEEcCCCcEEEeeecccccCCCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc-CC
Q 005224 502 IKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GM 580 (707)
Q Consensus 502 lkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~ellt-G~ 580 (707)
|||+||+++.++.+||+|||+++....... ........||+.|+|||++.+..++.++|||||||++|||++ |+
T Consensus 174 ikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-----~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~ 248 (316)
T 2xir_A 174 LAARNILLSEKNVVKICDFGLARDIYKDPD-----YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGA 248 (316)
T ss_dssp CSGGGEEECGGGCEEECCCGGGSCTTTCTT-----SEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSC
T ss_pred CccceEEECCCCCEEECCCccccccccCcc-----ceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCC
Confidence 999999999999999999999986543221 122344567889999999999999999999999999999998 99
Q ss_pred CCCCCCchhHHHHHHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhc
Q 005224 581 QPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNM 652 (707)
Q Consensus 581 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~ 652 (707)
.||............. ..+.....+..++..+.+++..||+.+|.+||++.++++.|+.+...
T Consensus 249 ~p~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 311 (316)
T 2xir_A 249 SPYPGVKIDEEFCRRL---------KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 311 (316)
T ss_dssp CSSTTCCCSHHHHHHH---------HHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCcccchhHHHHHHh---------ccCccCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhh
Confidence 9997544322211111 11122234455667899999999999999999999999999988654
No 159
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.4e-40 Score=344.27 Aligned_cols=260 Identities=27% Similarity=0.435 Sum_probs=214.0
Q ss_pred hcCCCccc-eEeeeCceEEEEEEeC---CCcEEEEEEeccCC-hhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEE
Q 005224 374 TNNFNSST-QIGQGGYGKVYKGILP---DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 448 (707)
Q Consensus 374 ~~~~~~~~-~lG~G~~g~Vy~~~~~---~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~l 448 (707)
.++|.+.+ .||+|+||+||+|.+. +++.||||++.... ....+.+.+|++++++++||||+++++++ ..+..++
T Consensus 8 ~~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~l 86 (287)
T 1u59_A 8 RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALML 86 (287)
T ss_dssp GGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEE
T ss_pred HHHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEE
Confidence 35566666 9999999999999853 67889999998643 33457799999999999999999999999 5567899
Q ss_pred EEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCC
Q 005224 449 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 528 (707)
Q Consensus 449 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~ 528 (707)
||||+++++|.+++... ...+++..++.++.|+++||.|||+.+ |+||||||+||+++.++.+||+|||+++....
T Consensus 87 v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~ 162 (287)
T 1u59_A 87 VMEMAGGGPLHKFLVGK-REEIPVSNVAELLHQVSMGMKYLEEKN---FVHRDLAARNVLLVNRHYAKISDFGLSKALGA 162 (287)
T ss_dssp EEECCTTEEHHHHHTTC-TTTSCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEEETTEEEECCCTTCEECTT
T ss_pred EEEeCCCCCHHHHHHhC-CccCCHHHHHHHHHHHHHHHHHHHHCC---EeeCCCchheEEEcCCCCEEECcccceeeecc
Confidence 99999999999999653 345999999999999999999999999 99999999999999999999999999987643
Q ss_pred CCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHhhcccchhhcc
Q 005224 529 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVID 607 (707)
Q Consensus 529 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 607 (707)
.... ........+|+.|+|||++.+..++.++|||||||++|||++ |+.||....... ... .+..
T Consensus 163 ~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~-~~~---------~i~~ 228 (287)
T 1u59_A 163 DDSY----YTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE-VMA---------FIEQ 228 (287)
T ss_dssp CSCE----ECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHH-HHH---------HHHT
T ss_pred Ccce----eeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHH-HHH---------HHhc
Confidence 2210 111223456889999999998999999999999999999998 999997544321 111 1112
Q ss_pred CCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhc
Q 005224 608 GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNM 652 (707)
Q Consensus 608 ~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~ 652 (707)
+.....+..++..+.+++..||+.+|.+||++.++++.|+.+...
T Consensus 229 ~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 273 (287)
T 1u59_A 229 GKRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYS 273 (287)
T ss_dssp TCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCcCCCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 233445667778999999999999999999999999999988764
No 160
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=2.6e-40 Score=343.82 Aligned_cols=254 Identities=31% Similarity=0.531 Sum_probs=206.6
Q ss_pred hcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCChhhH-------HHHHHHHHHHHccCCCcceeEEEEEEeCCe
Q 005224 374 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGE-------KEFLTEIQFLSRLHHRNLVSLVGYCDEEGE 445 (707)
Q Consensus 374 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~-------~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~ 445 (707)
.++|+..+.||+|+||+||+|... +++.||||++........ +.+.+|++++++++||||+++++++.+..
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~- 96 (287)
T 4f0f_A 18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP- 96 (287)
T ss_dssp STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT-
T ss_pred hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC-
Confidence 467889999999999999999974 789999999865332211 57899999999999999999999996654
Q ss_pred EEEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCc-----EEEeee
Q 005224 446 QMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFT-----AKVADF 520 (707)
Q Consensus 446 ~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~-----~kl~DF 520 (707)
++||||+++|+|.+.+... ...+++..++.++.|++.||+|||+.+ ++|+||||||+|||++.++. +||+||
T Consensus 97 -~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~l~~~l~~lH~~~-~~ivH~dikp~Nil~~~~~~~~~~~~kl~Df 173 (287)
T 4f0f_A 97 -RMVMEFVPCGDLYHRLLDK-AHPIKWSVKLRLMLDIALGIEYMQNQN-PPIVHRDLRSPNIFLQSLDENAPVCAKVADF 173 (287)
T ss_dssp -EEEEECCTTCBHHHHHHCT-TSCCCHHHHHHHHHHHHHHHHHHHTSS-SCCBCSCCSGGGEEESCCCTTCSCCEEECCC
T ss_pred -eEEEEecCCCCHHHHHhcc-cCCccHHHHHHHHHHHHHHHHHHHhCC-CCeecCCCCcceEEEeccCCCCceeEEeCCC
Confidence 6999999999999988654 346999999999999999999999875 45999999999999988776 999999
Q ss_pred cccccCCCCCCCCccccceecccccCCCccchhhhc--cCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhh
Q 005224 521 GLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFL--THKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQ 598 (707)
Q Consensus 521 Gla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~s~~sDVwS~Gvll~elltG~~pf~~~~~~~~~~~~~~~ 598 (707)
|+++.... ......||+.|+|||++. ...++.++|||||||++|||++|+.||...............
T Consensus 174 g~~~~~~~----------~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~ 243 (287)
T 4f0f_A 174 GLSQQSVH----------SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIR 243 (287)
T ss_dssp TTCBCCSS----------CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHHH
T ss_pred Cccccccc----------cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHHh
Confidence 99975321 233456899999999994 456788999999999999999999999754432111111111
Q ss_pred cccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 005224 599 SSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELES 648 (707)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~ 648 (707)
........+..++..+.+++..||+.+|.+||++.++++.|++
T Consensus 244 -------~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ 286 (287)
T 4f0f_A 244 -------EEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSE 286 (287)
T ss_dssp -------HSCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred -------ccCCCCCCCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHh
Confidence 1122234556677889999999999999999999999999875
No 161
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=2.4e-40 Score=346.11 Aligned_cols=264 Identities=31% Similarity=0.471 Sum_probs=209.7
Q ss_pred cCCCccceEeeeCceEEEEEEeCC----CcEEEEEEeccCCh-hhHHHHHHHHHHHHccCCCcceeEEEEEE-eCCeEEE
Q 005224 375 NNFNSSTQIGQGGYGKVYKGILPD----GTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCD-EEGEQML 448 (707)
Q Consensus 375 ~~~~~~~~lG~G~~g~Vy~~~~~~----~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~~~~~-~~~~~~l 448 (707)
.+|+..+.||+|+||+||+|.+.+ ...||+|.+..... ...+.+.+|+.++++++||||+++++++. .++..++
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 104 (298)
T 3f66_A 25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV 104 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEE
T ss_pred eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEE
Confidence 467888999999999999999642 23689999876433 34567899999999999999999999864 4567899
Q ss_pred EEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCC
Q 005224 449 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 528 (707)
Q Consensus 449 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~ 528 (707)
||||+++|+|.+++... ...+++..++.++.|+++||+|||+.+ |+||||||+||++++++.+||+|||+++....
T Consensus 105 v~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~ql~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~ 180 (298)
T 3f66_A 105 VLPYMKHGDLRNFIRNE-THNPTVKDLIGFGLQVAKGMKYLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYD 180 (298)
T ss_dssp EEECCTTCBHHHHHHCT-TCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTCCEEECSCGGGCCCSC
T ss_pred EEeCCCCCCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCchheEEECCCCCEEECcccccccccc
Confidence 99999999999999653 345899999999999999999999999 99999999999999999999999999986643
Q ss_pred CCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcC-CCCCCCCchhHHHHHHHhhcccchhhcc
Q 005224 529 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTG-MQPISHGKNIVREVNIAYQSSMMFSVID 607 (707)
Q Consensus 529 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~elltG-~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 607 (707)
.... .........+|+.|+|||.+.+..++.++|||||||++|||++| ..||..... .+... .+..
T Consensus 181 ~~~~---~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~-~~~~~---------~~~~ 247 (298)
T 3f66_A 181 KEYY---SVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT-FDITV---------YLLQ 247 (298)
T ss_dssp GGGC---BC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCT-TTHHH---------HHHT
T ss_pred cchh---ccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCH-HHHHH---------HHhc
Confidence 2211 11223345678899999999999999999999999999999995 455543322 11111 1112
Q ss_pred CCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCC
Q 005224 608 GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPE 655 (707)
Q Consensus 608 ~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~ 655 (707)
+.....+..++..+.+++.+||+.+|.+||++.++++.|+++...+..
T Consensus 248 ~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~~~ 295 (298)
T 3f66_A 248 GRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIG 295 (298)
T ss_dssp TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTSCC
T ss_pred CCCCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhcc
Confidence 222334555667899999999999999999999999999999876654
No 162
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=2.2e-40 Score=343.39 Aligned_cols=259 Identities=26% Similarity=0.445 Sum_probs=209.4
Q ss_pred HhcCCCccceEeeeCceEEEEEEeCC----CcEEEEEEeccCC-hhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEE
Q 005224 373 ATNNFNSSTQIGQGGYGKVYKGILPD----GTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQM 447 (707)
Q Consensus 373 ~~~~~~~~~~lG~G~~g~Vy~~~~~~----~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~ 447 (707)
..++|...+.||+|+||+||+|.+.+ +..||||++.... ....+.+.+|+++++.++||||+++++++.+ +..+
T Consensus 10 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~ 88 (281)
T 3cc6_A 10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTW 88 (281)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCE
T ss_pred cccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCE
Confidence 45688899999999999999998542 3469999987653 3345789999999999999999999999865 4568
Q ss_pred EEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCC
Q 005224 448 LVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAP 527 (707)
Q Consensus 448 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~ 527 (707)
+||||+++++|.+++.... ..+++..++.++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||++....
T Consensus 89 ~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 164 (281)
T 3cc6_A 89 IIMELYPYGELGHYLERNK-NSLKVLTLVLYSLQICKAMAYLESIN---CVHRDIAVRNILVASPECVKLGDFGLSRYIE 164 (281)
T ss_dssp EEEECCTTCBHHHHHHHHT-TTCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEEEETTEEEECCCCGGGCC-
T ss_pred EEEecCCCCCHHHHHHhcc-ccCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCccceEEECCCCcEEeCccCCCcccc
Confidence 9999999999999997643 45899999999999999999999999 9999999999999999999999999998664
Q ss_pred CCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHhhcccchhhc
Q 005224 528 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVI 606 (707)
Q Consensus 528 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~ 606 (707)
... ........+++.|+|||++.+..++.++|||||||++|||++ |+.||........ .. .+.
T Consensus 165 ~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~-~~---------~~~ 228 (281)
T 3cc6_A 165 DED------YYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDV-IG---------VLE 228 (281)
T ss_dssp --------------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGH-HH---------HHH
T ss_pred ccc------ccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHHH-HH---------HHh
Confidence 322 112233456789999999999999999999999999999998 9999975433211 11 111
Q ss_pred cCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhc
Q 005224 607 DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNM 652 (707)
Q Consensus 607 ~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~ 652 (707)
.......+..++..+.+++.+|++.+|.+||++.++++.|+.+...
T Consensus 229 ~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~ 274 (281)
T 3cc6_A 229 KGDRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQM 274 (281)
T ss_dssp HTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred cCCCCCCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHHHh
Confidence 1222334455667899999999999999999999999999987653
No 163
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=2.3e-41 Score=349.51 Aligned_cols=262 Identities=22% Similarity=0.328 Sum_probs=208.0
Q ss_pred hcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCC-hhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEe
Q 005224 374 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 451 (707)
Q Consensus 374 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E 451 (707)
.++|++.+.||+|+||.||+|... +++.||||++.... ....+.+.+|+.+++.++||||+++++++.+.+..++|||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 85 (276)
T 2yex_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (276)
T ss_dssp HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEE
Confidence 467899999999999999999975 78999999986533 2345688999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCC
Q 005224 452 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 531 (707)
Q Consensus 452 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 531 (707)
|+++++|.+++.. ...+++..++.++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||++........
T Consensus 86 ~~~~~~L~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~ 160 (276)
T 2yex_A 86 YCSGGELFDRIEP--DIGMPEPDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR 160 (276)
T ss_dssp CCTTEEGGGGSBT--TTBCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTCEECEETTE
T ss_pred ecCCCcHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCChHHEEEccCCCEEEeeCCCccccCCCcc
Confidence 9999999999854 345899999999999999999999999 99999999999999999999999999976532210
Q ss_pred CCccccceecccccCCCccchhhhccCCC-CCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCCC
Q 005224 532 EGIVPAHVSTVVKGTPGYLDPEYFLTHKL-TDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 610 (707)
Q Consensus 532 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-s~~sDVwS~Gvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 610 (707)
........|++.|+|||++.+..+ +.++|||||||++|||++|+.||............
T Consensus 161 -----~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~--------------- 220 (276)
T 2yex_A 161 -----ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSD--------------- 220 (276)
T ss_dssp -----ECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHH---------------
T ss_pred -----hhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHH---------------
Confidence 112234568999999999988665 77899999999999999999999754321111000
Q ss_pred CCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCCCCCCCCCC
Q 005224 611 GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSSD 690 (707)
Q Consensus 611 ~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f~~~ 690 (707)
... .....+. ....+....++|.+||..||++|||++|+++||||...
T Consensus 221 -------------~~~-----~~~~~~~--------------~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~ 268 (276)
T 2yex_A 221 -------------WKE-----KKTYLNP--------------WKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKP 268 (276)
T ss_dssp -------------HHT-----TCTTSTT--------------GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTCC
T ss_pred -------------hhh-----cccccCc--------------hhhcCHHHHHHHHHHCCCCchhCCCHHHHhcCccccCh
Confidence 000 0000000 00112233468888999999999999999999999876
Q ss_pred CC
Q 005224 691 VS 692 (707)
Q Consensus 691 ~~ 692 (707)
..
T Consensus 269 ~~ 270 (276)
T 2yex_A 269 LK 270 (276)
T ss_dssp CC
T ss_pred hh
Confidence 54
No 164
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=1.2e-40 Score=346.93 Aligned_cols=255 Identities=26% Similarity=0.427 Sum_probs=199.9
Q ss_pred CCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCC--hhhHHHHHHHHHHHHccCCCcceeEEEEEEe----CCeEEE
Q 005224 376 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE----EGEQML 448 (707)
Q Consensus 376 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~----~~~~~l 448 (707)
.|.+.+.||+|+||+||+|... ++..||+|++.... ....+.+.+|+.+++.++||||+++++++.. ....++
T Consensus 27 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l 106 (290)
T 1t4h_A 27 FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVL 106 (290)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEE
T ss_pred eEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEE
Confidence 4677889999999999999975 68899999987532 3345678999999999999999999999865 356899
Q ss_pred EEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEc-CCCcEEEeeecccccCC
Q 005224 449 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLD-HKFTAKVADFGLSRLAP 527 (707)
Q Consensus 449 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~-~~~~~kl~DFGla~~~~ 527 (707)
||||+++++|.+++... ..+++..++.++.|++.||.|||+.+ ++|+||||||+||+++ +++.+||+|||++....
T Consensus 107 v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~-~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~ 183 (290)
T 1t4h_A 107 VTELMTSGTLKTYLKRF--KVMKIKVLRSWCRQILKGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR 183 (290)
T ss_dssp EEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHTSS-SCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCC
T ss_pred EEEecCCCCHHHHHHHc--cCCCHHHHHHHHHHHHHHHHHHHcCC-CCEEECCCCHHHEEEECCCCCEEEeeCCCccccc
Confidence 99999999999999764 34899999999999999999999875 4599999999999998 78999999999997543
Q ss_pred CCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhcc
Q 005224 528 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVID 607 (707)
Q Consensus 528 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 607 (707)
.. ......||+.|+|||++. ..++.++|||||||++|||++|+.||.................
T Consensus 184 ~~---------~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~------- 246 (290)
T 1t4h_A 184 AS---------FAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGV------- 246 (290)
T ss_dssp TT---------SBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTC-------
T ss_pred cc---------ccccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHhccC-------
Confidence 22 223456899999999886 4589999999999999999999999976444322221110000
Q ss_pred CCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCCCCCCC
Q 005224 608 GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYV 687 (707)
Q Consensus 608 ~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f 687 (707)
+|.. ......+...++|.+||..||++|||++|+|+||||
T Consensus 247 ----------------------------~~~~------------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~~f 286 (290)
T 1t4h_A 247 ----------------------------KPAS------------FDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFF 286 (290)
T ss_dssp ----------------------------CCGG------------GGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGG
T ss_pred ----------------------------Cccc------------cCCCCCHHHHHHHHHHccCChhhCCCHHHHhhCccc
Confidence 0000 000011123467888999999999999999999999
Q ss_pred CCC
Q 005224 688 SSD 690 (707)
Q Consensus 688 ~~~ 690 (707)
..+
T Consensus 287 ~~~ 289 (290)
T 1t4h_A 287 QEE 289 (290)
T ss_dssp C--
T ss_pred ccC
Confidence 865
No 165
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=2.7e-41 Score=363.95 Aligned_cols=287 Identities=23% Similarity=0.337 Sum_probs=211.8
Q ss_pred hcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCC-hhhHHHHHHHHHHHHccCCCcceeEEEEEEeC-----CeE
Q 005224 374 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE-----GEQ 446 (707)
Q Consensus 374 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~-----~~~ 446 (707)
.++|++.+.||+|+||.||+|... +++.||||++.... ....+.+.+|++++++++||||+++++++... ...
T Consensus 26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 105 (364)
T 3qyz_A 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV 105 (364)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceE
Confidence 468999999999999999999965 78999999997533 23346789999999999999999999999654 468
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccC
Q 005224 447 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 526 (707)
Q Consensus 447 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~ 526 (707)
++||||++ |+|.+++... .+++..++.++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 106 ~iv~e~~~-~~L~~~l~~~---~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~ 178 (364)
T 3qyz_A 106 YIVQDLME-TDLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVA 178 (364)
T ss_dssp EEEEECCS-EEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEEcccC-cCHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCChHhEEECCCCCEEEEeCcceEec
Confidence 99999996 5999999653 4899999999999999999999999 999999999999999999999999999865
Q ss_pred CCCCCCCccccceecccccCCCccchhhhcc-CCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhh
Q 005224 527 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSV 605 (707)
Q Consensus 527 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDVwS~Gvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~ 605 (707)
...... ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||............. . .
T Consensus 179 ~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~-~------~ 247 (364)
T 3qyz_A 179 DPDHDH----TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL-G------I 247 (364)
T ss_dssp CGGGCB----CCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHH-H------H
T ss_pred CCCCCc----cccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHH-H------H
Confidence 432110 111234578999999998765 558999999999999999999999997544321111110 0 0
Q ss_pred ccCCCCCCChHHHHHHHHH--HHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCCC
Q 005224 606 IDGNMGSYPSECVEKFIKL--ALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLK 683 (707)
Q Consensus 606 ~~~~~~~~~~~~~~~l~~l--~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~ 683 (707)
.+..+.+....+... ...........+.... ...+..+..+.+||.+||..||++|||++|+|+
T Consensus 248 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 313 (364)
T 3qyz_A 248 ----LGSPSQEDLNCIINLKARNYLLSLPHKNKVPWN----------RLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 313 (364)
T ss_dssp ----HCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHH----------HHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ----hCCCCHHHHHHhhhhhHHHHHHhcCCccCCCHH----------HhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 001111111100000 0000111111111111 122344555678999999999999999999999
Q ss_pred CCCCCCCCC
Q 005224 684 HPYVSSDVS 692 (707)
Q Consensus 684 Hp~f~~~~~ 692 (707)
||||.....
T Consensus 314 hp~~~~~~~ 322 (364)
T 3qyz_A 314 HPYLEQYYD 322 (364)
T ss_dssp SGGGTTTCC
T ss_pred CcchhhccC
Confidence 999987643
No 166
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1e-40 Score=360.18 Aligned_cols=264 Identities=31% Similarity=0.509 Sum_probs=202.9
Q ss_pred CCCccceEeeeCceEEEEEEeC--CC--cEEEEEEeccCC-hhhHHHHHHHHHHHHccCCCcceeEEEEEEe-CCeEEEE
Q 005224 376 NFNSSTQIGQGGYGKVYKGILP--DG--TVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE-EGEQMLV 449 (707)
Q Consensus 376 ~~~~~~~lG~G~~g~Vy~~~~~--~~--~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~-~~~~~lV 449 (707)
.|+..+.||+|+||+||+|.+. ++ ..||||.+.... ....+.+.+|+.++++++||||+++++++.. ++..++|
T Consensus 90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv 169 (373)
T 3c1x_A 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVV 169 (373)
T ss_dssp EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEE
T ss_pred eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEE
Confidence 4667789999999999999863 32 468999987533 3345789999999999999999999999754 5678999
Q ss_pred EecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCC
Q 005224 450 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 529 (707)
Q Consensus 450 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~ 529 (707)
|||+++|+|.+++... ...+++..++.++.||++||+|||+.+ |+||||||+|||+++++.+||+|||+++.....
T Consensus 170 ~e~~~~g~L~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~ 245 (373)
T 3c1x_A 170 LPYMKHGDLRNFIRNE-THNPTVKDLIGFGLQVAKGMKFLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 245 (373)
T ss_dssp EECCTTCBHHHHHHCT-TCCCBHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCC---------
T ss_pred EECCCCCCHHHHHhhc-ccCCCHHHHHHHHHHHHHHHHHHHHCC---EecCccchheEEECCCCCEEEeecccccccccc
Confidence 9999999999999654 345899999999999999999999999 999999999999999999999999999865432
Q ss_pred CCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHhhcccchhhccC
Q 005224 530 DIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDG 608 (707)
Q Consensus 530 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 608 (707)
.... ........+|+.|+|||++.+..++.++|||||||++|||++ |..||....... . ...+..+
T Consensus 246 ~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~-~---------~~~~~~~ 312 (373)
T 3c1x_A 246 EFDS---VHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD-I---------TVYLLQG 312 (373)
T ss_dssp ---------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSC-H---------HHHHHTT
T ss_pred cccc---ccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHH-H---------HHHHHcC
Confidence 2111 112234457889999999999999999999999999999999 666775433211 1 1111222
Q ss_pred CCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCC
Q 005224 609 NMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPES 656 (707)
Q Consensus 609 ~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~ 656 (707)
.....+..++..+.+++.+||+.+|++||++.++++.|+.+...+...
T Consensus 313 ~~~~~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~~~~ 360 (373)
T 3c1x_A 313 RRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGE 360 (373)
T ss_dssp CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCCSC
T ss_pred CCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcccc
Confidence 333345667788999999999999999999999999999998776543
No 167
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=4.1e-41 Score=355.99 Aligned_cols=269 Identities=26% Similarity=0.447 Sum_probs=220.0
Q ss_pred ccHHHHHHHhcCCCccceEeeeCceEEEEEEeC------CCcEEEEEEeccCCh-hhHHHHHHHHHHHHccCCCcceeEE
Q 005224 365 FTYGEMALATNNFNSSTQIGQGGYGKVYKGILP------DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLV 437 (707)
Q Consensus 365 ~~~~~l~~~~~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~ 437 (707)
+..+++....++|++.+.||+|+||.||+|... +++.||||++..... .....+.+|+++++.++||||++++
T Consensus 15 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~ 94 (322)
T 1p4o_A 15 YVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLL 94 (322)
T ss_dssp CCCCTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEE
T ss_pred cChhhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeE
Confidence 344566677889999999999999999999854 368899999976433 3346789999999999999999999
Q ss_pred EEEEeCCeEEEEEecCCCCCHHHHHhhcC--------CCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEE
Q 005224 438 GYCDEEGEQMLVYEFMSNGTLRDQLSAKS--------KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILL 509 (707)
Q Consensus 438 ~~~~~~~~~~lV~E~~~~gsL~~~l~~~~--------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl 509 (707)
+++.+.+..++||||+++|+|.+++.... ...+++..++.++.|++.||+|||+++ |+||||||+||++
T Consensus 95 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~NIli 171 (322)
T 1p4o_A 95 GVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMV 171 (322)
T ss_dssp EEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTT---CBCSCCSGGGEEE
T ss_pred EEEccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCC---CccCCCccceEEE
Confidence 99999999999999999999999997532 245799999999999999999999999 9999999999999
Q ss_pred cCCCcEEEeeecccccCCCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc-CCCCCCCCch
Q 005224 510 DHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKN 588 (707)
Q Consensus 510 ~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~ellt-G~~pf~~~~~ 588 (707)
+.++.+||+|||+++....... ........+|+.|+|||++.+..++.++|||||||++|||++ |+.||.....
T Consensus 172 ~~~~~~kl~Dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~ 246 (322)
T 1p4o_A 172 AEDFTVKIGDFGMTRDIYETDY-----YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN 246 (322)
T ss_dssp CTTCCEEECCTTCCCGGGGGGC-----EEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCH
T ss_pred cCCCeEEECcCccccccccccc-----cccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCH
Confidence 9999999999999976532110 112233456889999999999999999999999999999999 8888865433
Q ss_pred hHHHHHHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 005224 589 IVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 651 (707)
Q Consensus 589 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~ 651 (707)
. .... .+..+.....+..++..+.+++.+|++.+|.+||++.++++.|+....
T Consensus 247 ~-~~~~---------~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~ 299 (322)
T 1p4o_A 247 E-QVLR---------FVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 299 (322)
T ss_dssp H-HHHH---------HHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred H-HHHH---------HHHcCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhc
Confidence 1 1111 112223334456677889999999999999999999999999987543
No 168
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=7.2e-41 Score=347.19 Aligned_cols=257 Identities=23% Similarity=0.356 Sum_probs=204.5
Q ss_pred hcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCChh------hHHHHHHHHHHHHccCCCcceeEEEEEEeCCeE
Q 005224 374 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ------GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQ 446 (707)
Q Consensus 374 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~------~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~ 446 (707)
.++|++.+.||+|+||+||+|... +++.||+|++...... ..+.+.+|++++++++||||+++++++...+..
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 83 (283)
T 3bhy_A 4 EDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDV 83 (283)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hhhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeE
Confidence 357889999999999999999976 7899999998753321 357899999999999999999999999999999
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCC----cEEEeeecc
Q 005224 447 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKF----TAKVADFGL 522 (707)
Q Consensus 447 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~----~~kl~DFGl 522 (707)
++||||+++++|.+++... ..+++..++.++.|++.||+|||+.+ |+||||||+||+++.++ .+||+|||+
T Consensus 84 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~ 158 (283)
T 3bhy_A 84 VLILELVSGGELFDFLAEK--ESLTEDEATQFLKQILDGVHYLHSKR---IAHFDLKPENIMLLDKNVPNPRIKLIDFGI 158 (283)
T ss_dssp EEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCSSSSSCCEEECCCTT
T ss_pred EEEEeecCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCChHHEEEecCCCCCCceEEEeccc
Confidence 9999999999999999764 35899999999999999999999998 99999999999998877 899999999
Q ss_pred cccCCCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccc
Q 005224 523 SRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMM 602 (707)
Q Consensus 523 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~elltG~~pf~~~~~~~~~~~~~~~~~~~ 602 (707)
+....... ......|++.|+|||++.+..++.++||||||+++|||++|+.||........ .....
T Consensus 159 ~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~~~~~----- 224 (283)
T 3bhy_A 159 AHKIEAGN--------EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQET-LTNIS----- 224 (283)
T ss_dssp CEECC----------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH-HHHHH-----
T ss_pred ceeccCCC--------cccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHHH-HHHhH-----
Confidence 98654321 12344689999999999999999999999999999999999999975433111 00000
Q ss_pred hhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCC
Q 005224 603 FSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSML 682 (707)
Q Consensus 603 ~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L 682 (707)
......+.. ..+..+....+++.+||..||++|||++|+|
T Consensus 225 -----~~~~~~~~~-----------------------------------~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l 264 (283)
T 3bhy_A 225 -----AVNYDFDEE-----------------------------------YFSNTSELAKDFIRRLLVKDPKRRMTIAQSL 264 (283)
T ss_dssp -----TTCCCCCHH-----------------------------------HHTTCCHHHHHHHHTTSCSSGGGSCCHHHHH
T ss_pred -----hcccCCcch-----------------------------------hcccCCHHHHHHHHHHccCCHhHCcCHHHHH
Confidence 000000100 0011222345788999999999999999999
Q ss_pred CCCCCCC
Q 005224 683 KHPYVSS 689 (707)
Q Consensus 683 ~Hp~f~~ 689 (707)
+||||..
T Consensus 265 ~h~~~~~ 271 (283)
T 3bhy_A 265 EHSWIKA 271 (283)
T ss_dssp HCHHHHH
T ss_pred hCHHHHH
Confidence 9999864
No 169
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=1e-40 Score=345.40 Aligned_cols=254 Identities=30% Similarity=0.458 Sum_probs=206.2
Q ss_pred HhcCCCccceEeeeCceEEEEEEeCCCcEEEEEEeccCChhhHHHHHHHHHHHHccCCCcceeEEEEEEeC-CeEEEEEe
Q 005224 373 ATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE-GEQMLVYE 451 (707)
Q Consensus 373 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~-~~~~lV~E 451 (707)
..++|+..+.||+|+||+||+|.. +|+.||||++.... ..+.+.+|++++++++||||+++++++... +..++|||
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e 95 (278)
T 1byg_A 19 NMKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTE 95 (278)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEE-TTEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEEC
T ss_pred ChhhceEEeEEecCCCceEEEEEE-cCCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEe
Confidence 356789999999999999999988 48899999997643 446789999999999999999999997554 47899999
Q ss_pred cCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCC
Q 005224 452 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 531 (707)
Q Consensus 452 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 531 (707)
|+++++|.+++.......+++..++.++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 96 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~-- 170 (278)
T 1byg_A 96 YMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASST-- 170 (278)
T ss_dssp CCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTSCEEECCCCC---------
T ss_pred cCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhCC---ccccCCCcceEEEeCCCcEEEeecccccccccc--
Confidence 999999999997654445889999999999999999999999 999999999999999999999999998754321
Q ss_pred CCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHhhcccchhhccCCC
Q 005224 532 EGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 610 (707)
Q Consensus 532 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 610 (707)
.....+++.|+|||++.+..++.++||||||+++|||++ |+.||...... +.. ..+..+..
T Consensus 171 --------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~-~~~---------~~~~~~~~ 232 (278)
T 1byg_A 171 --------QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK-DVV---------PRVEKGYK 232 (278)
T ss_dssp -------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGG-GHH---------HHHTTTCC
T ss_pred --------ccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHH-HHH---------HHHhcCCC
Confidence 123357889999999999999999999999999999998 99999754321 111 11112223
Q ss_pred CCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhc
Q 005224 611 GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNM 652 (707)
Q Consensus 611 ~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~ 652 (707)
...+..++..+.+++..||+.+|.+||++.++++.|+.+...
T Consensus 233 ~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~~ 274 (278)
T 1byg_A 233 MDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTH 274 (278)
T ss_dssp CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCcccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHhh
Confidence 345566778899999999999999999999999999988653
No 170
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=8e-41 Score=364.01 Aligned_cols=281 Identities=22% Similarity=0.327 Sum_probs=202.8
Q ss_pred hcCCCccceEeeeCceEEEEEEeCCCcEEEEEEeccCChhhHHHHHHHHHHHHccCCCcceeEEEEEEeCC------eEE
Q 005224 374 TNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG------EQM 447 (707)
Q Consensus 374 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~------~~~ 447 (707)
..+|+..+.||+|+||+||+|...++..||+|++..... ...+|+++++.++||||+++++++...+ ..+
T Consensus 39 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~----~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~ 114 (394)
T 4e7w_A 39 EIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR----FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLN 114 (394)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEE
T ss_pred cceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc----hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEE
Confidence 346889999999999999999987777799998765332 2236999999999999999999995543 378
Q ss_pred EEEecCCCCCHHHHHhh--cCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEc-CCCcEEEeeecccc
Q 005224 448 LVYEFMSNGTLRDQLSA--KSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLD-HKFTAKVADFGLSR 524 (707)
Q Consensus 448 lV~E~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~-~~~~~kl~DFGla~ 524 (707)
+||||+++ ++.+.+.. .....+++..++.++.||++||+|||+.+ |+||||||+|||++ .++.+||+|||+|+
T Consensus 115 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~~kL~DFG~a~ 190 (394)
T 4e7w_A 115 LVLEYVPE-TVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIG---ICHRDIKPQNLLLDPPSGVLKLIDFGSAK 190 (394)
T ss_dssp EEEECCSE-EHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred EEeeccCc-cHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCCHHHEEEcCCCCcEEEeeCCCcc
Confidence 99999976 44444432 23456999999999999999999999999 99999999999999 79999999999998
Q ss_pred cCCCCCCCCccccceecccccCCCccchhhhccC-CCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccch
Q 005224 525 LAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMF 603 (707)
Q Consensus 525 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~sDVwS~Gvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~ 603 (707)
...... ......||+.|+|||++.+. .++.++|||||||++|||++|+.||............ ...
T Consensus 191 ~~~~~~--------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i-~~~---- 257 (394)
T 4e7w_A 191 ILIAGE--------PNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEI-IKV---- 257 (394)
T ss_dssp ECCTTC--------CCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH-HHH----
T ss_pred cccCCC--------CCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH-HHH----
Confidence 764322 22345689999999999764 5899999999999999999999999765432221111 100
Q ss_pred hhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCC-HHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCC
Q 005224 604 SVIDGNMGSYPSECVEKFIKLALKCCQDETDARPS-MSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSML 682 (707)
Q Consensus 604 ~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt-~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L 682 (707)
.+..+.+....+.. ...-..-|..++. ...+ ..+..++.+.+||.+||+.||++|+|++|+|
T Consensus 258 ------~g~p~~~~~~~~~~--~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l 320 (394)
T 4e7w_A 258 ------LGTPSREQIKTMNP--NYMEHKFPQIRPHPFSKV---------FRPRTPPDAIDLISRLLEYTPSARLTAIEAL 320 (394)
T ss_dssp ------HCCCCHHHHHHHCG--GGSSSCCCCCCCCCHHHH---------SCTTCCHHHHHHHHHHCCSSGGGSCCHHHHH
T ss_pred ------hCCCCHHHHHhhCh--hhhhhccccccCCcHHHh---------ccccCCHHHHHHHHHHhCCChhhCCCHHHHh
Confidence 00011111110000 0000011111211 1110 1122445567899999999999999999999
Q ss_pred CCCCCCCCCC
Q 005224 683 KHPYVSSDVS 692 (707)
Q Consensus 683 ~Hp~f~~~~~ 692 (707)
+||||..-..
T Consensus 321 ~hp~f~~~~~ 330 (394)
T 4e7w_A 321 CHPFFDELRT 330 (394)
T ss_dssp TSGGGSTTTS
T ss_pred cChhhhhhcc
Confidence 9999986544
No 171
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=2.2e-40 Score=351.40 Aligned_cols=207 Identities=25% Similarity=0.407 Sum_probs=170.9
Q ss_pred hcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCCh-hhHHHHHHHHHHHHccCCCcceeEEEEEEeCC-------
Q 005224 374 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG------- 444 (707)
Q Consensus 374 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~------- 444 (707)
.++|++.+.||+|+||.||+|+.. +|+.||||++..... ...+.+.+|++++++++||||+++++++.+..
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 84 (332)
T 3qd2_B 5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEE 84 (332)
T ss_dssp HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHH
T ss_pred hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhh
Confidence 357889999999999999999976 799999999875433 34578999999999999999999999986543
Q ss_pred --------------------------------------------------eEEEEEecCCCCCHHHHHhhcCC-CCcCHH
Q 005224 445 --------------------------------------------------EQMLVYEFMSNGTLRDQLSAKSK-EPLGFA 473 (707)
Q Consensus 445 --------------------------------------------------~~~lV~E~~~~gsL~~~l~~~~~-~~l~~~ 473 (707)
..++||||+++++|.+++..... ....+.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~ 164 (332)
T 3qd2_B 85 MDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHG 164 (332)
T ss_dssp HHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHH
T ss_pred hhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhH
Confidence 37999999999999999976433 345677
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCCCcc-----ccceecccccCCC
Q 005224 474 MRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIV-----PAHVSTVVKGTPG 548 (707)
Q Consensus 474 ~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~-----~~~~~~~~~gt~~ 548 (707)
.++.++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+++........... .........||+.
T Consensus 165 ~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~ 241 (332)
T 3qd2_B 165 VCLHIFIQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKL 241 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGG
T ss_pred HHHHHHHHHHHHHHHHHhCC---eeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcC
Confidence 88999999999999999999 999999999999999999999999999876543211100 0112234569999
Q ss_pred ccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCC
Q 005224 549 YLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPI 583 (707)
Q Consensus 549 y~aPE~~~~~~~s~~sDVwS~Gvll~elltG~~pf 583 (707)
|+|||++.+..++.++|||||||++|||++|..|+
T Consensus 242 y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~ 276 (332)
T 3qd2_B 242 YMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQ 276 (332)
T ss_dssp GSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCH
T ss_pred ccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCCh
Confidence 99999999999999999999999999999986654
No 172
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=2.7e-40 Score=344.33 Aligned_cols=264 Identities=27% Similarity=0.480 Sum_probs=202.8
Q ss_pred HHHhcCCCccceEeeeCceEEEEEEeCCCcEEEEEEeccCC--hhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEE
Q 005224 371 ALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 448 (707)
Q Consensus 371 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~l 448 (707)
+...++|++.+.||+|+||+||+|...+ .||||++.... ....+.+.+|++++++++|+||+++++++ .....++
T Consensus 20 ei~~~~y~~~~~lG~G~~g~Vy~~~~~~--~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~l 96 (289)
T 3og7_A 20 EIPDGQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAI 96 (289)
T ss_dssp BCCTTSCEEEEEEEECSSEEEEEEESSS--EEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEE
T ss_pred ccCccceeeeeEecCCCCeEEEEEEEcC--ceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEE
Confidence 3446789999999999999999998643 59999987543 33346789999999999999999999965 4567899
Q ss_pred EEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCC
Q 005224 449 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 528 (707)
Q Consensus 449 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~ 528 (707)
||||+++++|.+++... ...+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++....
T Consensus 97 v~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~L~~lH~~~---i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 172 (289)
T 3og7_A 97 VTQWCEGSSLYHHLHAS-ETKFEMKKLIDIARQTARGMDYLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSR 172 (289)
T ss_dssp EEECCCEEEHHHHHTTC----CCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEETTTEEEECCCC-------
T ss_pred EEEecCCCcHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHhCC---cccccCccceEEECCCCCEEEccceecccccc
Confidence 99999999999999654 345999999999999999999999999 99999999999999999999999999976542
Q ss_pred CCCCCccccceecccccCCCccchhhhc---cCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhh
Q 005224 529 PDIEGIVPAHVSTVVKGTPGYLDPEYFL---THKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSV 605 (707)
Q Consensus 529 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~s~~sDVwS~Gvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~ 605 (707)
.. .........||+.|+|||++. +..++.++|||||||++|||++|+.||............... . .
T Consensus 173 ~~-----~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~-~----~ 242 (289)
T 3og7_A 173 WS-----GSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGR-G----S 242 (289)
T ss_dssp ----------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHHHH-T----S
T ss_pred cc-----ccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHHHhcc-c----c
Confidence 11 112233456899999999997 567888999999999999999999999765543322222111 1 1
Q ss_pred ccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 005224 606 IDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 651 (707)
Q Consensus 606 ~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~ 651 (707)
...........++..+.+++..|++.+|.+||++.++++.|+++..
T Consensus 243 ~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~~ 288 (289)
T 3og7_A 243 LSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR 288 (289)
T ss_dssp CCCCTTSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred cCcchhhccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence 1122223445667889999999999999999999999999998653
No 173
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=4.1e-41 Score=369.30 Aligned_cols=277 Identities=21% Similarity=0.294 Sum_probs=199.6
Q ss_pred cCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHccCCCcceeEEEEEEeC----C--eEE
Q 005224 375 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE----G--EQM 447 (707)
Q Consensus 375 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~----~--~~~ 447 (707)
.+|+..+.||+|+||+||+|.+. +|+.||||++..... ...+|+++++.++||||++++++|... + ..+
T Consensus 54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~----~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~ 129 (420)
T 1j1b_A 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLN 129 (420)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEE
T ss_pred ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch----hHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEE
Confidence 46888999999999999999975 699999999865322 234699999999999999999998542 1 367
Q ss_pred EEEecCCCCCHHHHHhh--cCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCC-CcEEEeeecccc
Q 005224 448 LVYEFMSNGTLRDQLSA--KSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHK-FTAKVADFGLSR 524 (707)
Q Consensus 448 lV~E~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~-~~~kl~DFGla~ 524 (707)
+||||+++ +|.+.+.. .....+++..++.++.||++||+|||+.+ |+||||||+|||++.+ +.+||+|||+++
T Consensus 130 lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NILl~~~~~~~kl~DFG~a~ 205 (420)
T 1j1b_A 130 LVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK 205 (420)
T ss_dssp EEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTT---EECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred eehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChhhEEEeCCCCeEEeccchhhh
Confidence 99999975 77776653 34557999999999999999999999998 9999999999999965 678999999998
Q ss_pred cCCCCCCCCccccceecccccCCCccchhhhccC-CCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccch
Q 005224 525 LAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMF 603 (707)
Q Consensus 525 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~sDVwS~Gvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~ 603 (707)
...... ......||+.|+|||++.+. .++.++|||||||++|||++|+.||........ +......
T Consensus 206 ~~~~~~--------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~-l~~i~~~---- 272 (420)
T 1j1b_A 206 QLVRGE--------PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQ-LVEIIKV---- 272 (420)
T ss_dssp ECCTTC--------CCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHHH----
T ss_pred hcccCC--------CceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHH----
Confidence 754321 12345689999999999774 799999999999999999999999976543221 1111110
Q ss_pred hhccCCCCCCChHHHHHHHHHHHHhcc-cCCCC-CCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcC
Q 005224 604 SVIDGNMGSYPSECVEKFIKLALKCCQ-DETDA-RPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSM 681 (707)
Q Consensus 604 ~~~~~~~~~~~~~~~~~l~~l~~~c~~-~~p~~-RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~ 681 (707)
.+....+....+ -..... ..|.. +.....+ ..+...+.+.+||.+||+.||++|+|++|+
T Consensus 273 ------lg~p~~~~~~~~---~~~~~~~~~p~~~~~~~~~~---------~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~ 334 (420)
T 1j1b_A 273 ------LGTPTREQIREM---NPNYTEFKFPQIKAHPWTKV---------FRPRTPPEAIALCSRLLEYTPTARLTPLEA 334 (420)
T ss_dssp ------HCSCCHHHHHHH---CSCCCCCCCCCCCCCCHHHH---------SCTTSCHHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred ------hCCCCHHHHHhh---ChhhhhhccCccCCCCHHHh---------cCCCCCHHHHHHHHHhccCChhHCCCHHHH
Confidence 000011111000 000000 00000 0000000 012233456789999999999999999999
Q ss_pred CCCCCCCCC
Q 005224 682 LKHPYVSSD 690 (707)
Q Consensus 682 L~Hp~f~~~ 690 (707)
|+||||..-
T Consensus 335 l~hp~f~~~ 343 (420)
T 1j1b_A 335 CAHSFFDEL 343 (420)
T ss_dssp HTSGGGGGG
T ss_pred hCCHhhccc
Confidence 999999653
No 174
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=1e-40 Score=353.42 Aligned_cols=293 Identities=24% Similarity=0.319 Sum_probs=212.3
Q ss_pred HHhcCCCccceEeeeCceEEEEEEe--CCCcEEEEEEeccCChh--hHHHHHHHHHHHHcc---CCCcceeEEEEEE---
Q 005224 372 LATNNFNSSTQIGQGGYGKVYKGIL--PDGTVVAVKRAQEGSLQ--GEKEFLTEIQFLSRL---HHRNLVSLVGYCD--- 441 (707)
Q Consensus 372 ~~~~~~~~~~~lG~G~~g~Vy~~~~--~~~~~vavK~l~~~~~~--~~~~~~~E~~~l~~l---~H~nIv~l~~~~~--- 441 (707)
...++|++.+.||+|+||+||+|.. .+|+.||||++...... ....+.+|+.+++.+ +||||+++++++.
T Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~ 87 (326)
T 1blx_A 8 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSR 87 (326)
T ss_dssp CGGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEE
T ss_pred CchhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecc
Confidence 3457899999999999999999997 46899999998643221 123566777777766 8999999999987
Q ss_pred --eCCeEEEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEee
Q 005224 442 --EEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVAD 519 (707)
Q Consensus 442 --~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~D 519 (707)
.....++||||++ |+|.+++.......+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|
T Consensus 88 ~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~g---i~H~dlkp~Nili~~~~~~kl~D 163 (326)
T 1blx_A 88 TDRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLAD 163 (326)
T ss_dssp CSSEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECS
T ss_pred cCCCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCCHHHeEEcCCCCEEEec
Confidence 4567899999997 69999998776667999999999999999999999999 99999999999999999999999
Q ss_pred ecccccCCCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhc
Q 005224 520 FGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQS 599 (707)
Q Consensus 520 FGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~elltG~~pf~~~~~~~~~~~~~~~~ 599 (707)
||+++.... ........||..|+|||++.+..++.++|||||||++|||++|+.||........ .......
T Consensus 164 fg~~~~~~~--------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~i~~~ 234 (326)
T 1blx_A 164 FGLARIYSF--------QMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQ-LGKILDV 234 (326)
T ss_dssp CCSCCCCCG--------GGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHH
T ss_pred CcccccccC--------CCCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHH-HHHHHHH
Confidence 999976532 1123345689999999999999999999999999999999999999976544221 1111100
Q ss_pred ccch-hhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCC
Q 005224 600 SMMF-SVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSS 678 (707)
Q Consensus 600 ~~~~-~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa 678 (707)
.... ...-......+. ..+... .... +....+..+....+|+.+||..||++|||+
T Consensus 235 ~~~~~~~~~~~~~~~~~-----------~~~~~~--~~~~----------~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~ 291 (326)
T 1blx_A 235 IGLPGEEDWPRDVALPR-----------QAFHSK--SAQP----------IEKFVTDIDELGKDLLLKCLTFNPAKRISA 291 (326)
T ss_dssp HCCCCGGGSCTTCSSCG-----------GGSCCC--CCCC----------GGGTCCSCCHHHHHHHHHHSCSSTTTSCCH
T ss_pred cCCCCcccCccccccch-----------hhhccc--Ccch----------hhhccccCCHHHHHHHHHHcCCCcccCCCH
Confidence 0000 000000000000 000000 0000 011122333444689999999999999999
Q ss_pred CcCCCCCCCCCCCCCCCccccc
Q 005224 679 SSMLKHPYVSSDVSGSNLVSGV 700 (707)
Q Consensus 679 ~e~L~Hp~f~~~~~~~~~~~~~ 700 (707)
+|+|+||||.........+...
T Consensus 292 ~e~l~hp~~~~~~~~~~~~~~~ 313 (326)
T 1blx_A 292 YSALSHPYFQDLERCKENLDSH 313 (326)
T ss_dssp HHHHTSGGGTTCCCCCCC----
T ss_pred HHHhcCccccccchhhhhhccC
Confidence 9999999998766554444433
No 175
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=1.7e-40 Score=346.18 Aligned_cols=262 Identities=27% Similarity=0.387 Sum_probs=211.8
Q ss_pred HHHhcCCCccc-eEeeeCceEEEEEEe---CCCcEEEEEEeccCCh--hhHHHHHHHHHHHHccCCCcceeEEEEEEeCC
Q 005224 371 ALATNNFNSST-QIGQGGYGKVYKGIL---PDGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG 444 (707)
Q Consensus 371 ~~~~~~~~~~~-~lG~G~~g~Vy~~~~---~~~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~ 444 (707)
....++|.+.+ .||+|+||+||+|.+ .+++.||||++..... ...+++.+|+++++.++||||+++++++ ..+
T Consensus 12 ~~~~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~ 90 (291)
T 1xbb_A 12 YLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAE 90 (291)
T ss_dssp BCCGGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESS
T ss_pred eecchhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCC
Confidence 34456788887 999999999999964 2478999999976432 2256799999999999999999999999 567
Q ss_pred eEEEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccc
Q 005224 445 EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSR 524 (707)
Q Consensus 445 ~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~ 524 (707)
..++||||+++++|.+++... ..+++..++.++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++
T Consensus 91 ~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~ 165 (291)
T 1xbb_A 91 SWMLVMEMAELGPLNKYLQQN--RHVKDKNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSK 165 (291)
T ss_dssp SEEEEEECCTTEEHHHHHHHC--TTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEEECCCTTCE
T ss_pred CcEEEEEeCCCCCHHHHHHhC--cCCCHHHHHHHHHHHHHHHHHHHhCC---eEcCCCCcceEEEeCCCcEEEccCCcce
Confidence 789999999999999999764 35899999999999999999999998 9999999999999999999999999998
Q ss_pred cCCCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHhhcccch
Q 005224 525 LAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMF 603 (707)
Q Consensus 525 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~ 603 (707)
........ ........+++.|+|||++.+..++.++||||||+++|||++ |+.||....... ...
T Consensus 166 ~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~--~~~-------- 231 (291)
T 1xbb_A 166 ALRADENY----YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE--VTA-------- 231 (291)
T ss_dssp ECCTTCSE----EEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH--HHH--------
T ss_pred eeccCCCc----ccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHH--HHH--------
Confidence 76433210 111223346788999999999899999999999999999999 999997654321 111
Q ss_pred hhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhc
Q 005224 604 SVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNM 652 (707)
Q Consensus 604 ~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~ 652 (707)
.+..+.....+..++..+.+++..||+.+|.+||++.++++.|+.+...
T Consensus 232 ~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~ 280 (291)
T 1xbb_A 232 MLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYD 280 (291)
T ss_dssp HHHTTCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHH
T ss_pred HHHcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence 1112223345566778899999999999999999999999999988764
No 176
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=6.1e-41 Score=351.18 Aligned_cols=261 Identities=24% Similarity=0.398 Sum_probs=202.4
Q ss_pred hcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEec
Q 005224 374 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 452 (707)
Q Consensus 374 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E~ 452 (707)
.++|++.+.||+|+||.||+|... +++.||+|++........+.+.+|+++++.++||||+++++++...+..++||||
T Consensus 18 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 97 (302)
T 2j7t_A 18 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEF 97 (302)
T ss_dssp GGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEEC
T ss_pred ccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEe
Confidence 468999999999999999999976 6899999999876656667899999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCC
Q 005224 453 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 532 (707)
Q Consensus 453 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 532 (707)
+++++|.+++.... ..+++..++.++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 98 ~~~~~l~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--- 170 (302)
T 2j7t_A 98 CPGGAVDAIMLELD-RGLTEPQIQVVCRQMLEALNFLHSKR---IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKT--- 170 (302)
T ss_dssp CTTEEHHHHHHHHT-SCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTSCEEECCCHHHHHHHHH---
T ss_pred CCCCcHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHhcCC---cccCCCCHHHEEECCCCCEEEEECCCCcccccc---
Confidence 99999999987643 35899999999999999999999998 999999999999999999999999987532110
Q ss_pred CccccceecccccCCCccchhhhc-----cCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhcc
Q 005224 533 GIVPAHVSTVVKGTPGYLDPEYFL-----THKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVID 607 (707)
Q Consensus 533 ~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~s~~sDVwS~Gvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 607 (707)
........||+.|+|||++. +..++.++|||||||++|||++|+.||..........
T Consensus 171 ----~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~-------------- 232 (302)
T 2j7t_A 171 ----LQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLL-------------- 232 (302)
T ss_dssp ----HHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH--------------
T ss_pred ----ccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHH--------------
Confidence 11123346899999999984 6778999999999999999999999996543211100
Q ss_pred CCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCCCCCCC
Q 005224 608 GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYV 687 (707)
Q Consensus 608 ~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f 687 (707)
++. ...+...+.. ...+....+++.+||..||++|||++|+++||||
T Consensus 233 ---------------~~~----~~~~~~~~~~--------------~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~ 279 (302)
T 2j7t_A 233 ---------------KIA----KSDPPTLLTP--------------SKWSVEFRDFLKIALDKNPETRPSAAQLLEHPFV 279 (302)
T ss_dssp ---------------HHH----HSCCCCCSSG--------------GGSCHHHHHHHHHHSCSCTTTSCCHHHHTTSTTT
T ss_pred ---------------HHh----ccCCcccCCc--------------cccCHHHHHHHHHHcccChhhCCCHHHHhcChHH
Confidence 000 0000000000 0011123467888899999999999999999999
Q ss_pred CCCCC
Q 005224 688 SSDVS 692 (707)
Q Consensus 688 ~~~~~ 692 (707)
.+...
T Consensus 280 ~~~~~ 284 (302)
T 2j7t_A 280 SSITS 284 (302)
T ss_dssp TTCCC
T ss_pred hhhcc
Confidence 87654
No 177
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=5.9e-41 Score=376.11 Aligned_cols=256 Identities=24% Similarity=0.390 Sum_probs=200.8
Q ss_pred hcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCC--hhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEE
Q 005224 374 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 450 (707)
Q Consensus 374 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~ 450 (707)
.++|++.+.||+|+||+||+|... +++.||||++.... ......+.+|+.+++.++||||++++++|.+.+..++||
T Consensus 36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 115 (494)
T 3lij_A 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVM 115 (494)
T ss_dssp HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 456889999999999999999975 78999999987543 223467899999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcC---CCcEEEeeecccccCC
Q 005224 451 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDH---KFTAKVADFGLSRLAP 527 (707)
Q Consensus 451 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~---~~~~kl~DFGla~~~~ 527 (707)
||+++|+|.+++... ..+++..++.++.||++||+|||+.+ |+||||||+|||++. ++.+||+|||+++...
T Consensus 116 e~~~~g~L~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~ 190 (494)
T 3lij_A 116 ECYKGGELFDEIIHR--MKFNEVDAAVIIKQVLSGVTYLHKHN---IVHRDLKPENLLLESKEKDALIKIVDFGLSAVFE 190 (494)
T ss_dssp ECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCSSTTCCEEECCCTTCEECB
T ss_pred ecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCChhhEEEeCCCCCCcEEEEECCCCeECC
Confidence 999999999988664 34899999999999999999999999 999999999999976 4559999999998764
Q ss_pred CCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhcc
Q 005224 528 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVID 607 (707)
Q Consensus 528 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 607 (707)
.. .......||+.|+|||++. ..++.++||||+||++|||++|+.||...... +...
T Consensus 191 ~~--------~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-~~~~------------- 247 (494)
T 3lij_A 191 NQ--------KKMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQ-EILR------------- 247 (494)
T ss_dssp TT--------BCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHH-------------
T ss_pred CC--------ccccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHH-HHHH-------------
Confidence 32 1233456999999999986 56899999999999999999999999654321 1100
Q ss_pred CCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCCCCCCC
Q 005224 608 GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYV 687 (707)
Q Consensus 608 ~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f 687 (707)
.+........+ | .....++.+.+||.+||+.||++|||++|+|+||||
T Consensus 248 ---------------~i~~~~~~~~~---~--------------~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~hp~~ 295 (494)
T 3lij_A 248 ---------------KVEKGKYTFDS---P--------------EWKNVSEGAKDLIKQMLQFDSQRRISAQQALEHPWI 295 (494)
T ss_dssp ---------------HHHHTCCCCCS---G--------------GGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTCHHH
T ss_pred ---------------HHHhCCCCCCc---h--------------hcccCCHHHHHHHHHHCCCChhhCccHHHHhcCccc
Confidence 00000000000 0 001122334578999999999999999999999999
Q ss_pred CC
Q 005224 688 SS 689 (707)
Q Consensus 688 ~~ 689 (707)
..
T Consensus 296 ~~ 297 (494)
T 3lij_A 296 KE 297 (494)
T ss_dssp HH
T ss_pred cc
Confidence 65
No 178
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=1.1e-40 Score=374.82 Aligned_cols=259 Identities=25% Similarity=0.344 Sum_probs=205.3
Q ss_pred hcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCCh-------------hhHHHHHHHHHHHHccCCCcceeEEEE
Q 005224 374 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL-------------QGEKEFLTEIQFLSRLHHRNLVSLVGY 439 (707)
Q Consensus 374 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~-------------~~~~~~~~E~~~l~~l~H~nIv~l~~~ 439 (707)
.++|.+.++||+|+||+||+|... +++.||||++..... ...+.+.+|+.++++++||||++++++
T Consensus 35 ~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~ 114 (504)
T 3q5i_A 35 GESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDV 114 (504)
T ss_dssp GGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred ccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence 468999999999999999999975 689999999875331 224678999999999999999999999
Q ss_pred EEeCCeEEEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCC---cEE
Q 005224 440 CDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKF---TAK 516 (707)
Q Consensus 440 ~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~---~~k 516 (707)
+.+.+..++||||+++|+|.+++.... .+++..++.++.||+.||+|||+.+ |+||||||+|||++.++ .+|
T Consensus 115 ~~~~~~~~lv~e~~~gg~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~k 189 (504)
T 3q5i_A 115 FEDKKYFYLVTEFYEGGELFEQIINRH--KFDECDAANIMKQILSGICYLHKHN---IVHRDIKPENILLENKNSLLNIK 189 (504)
T ss_dssp EECSSEEEEEEECCTTCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESSTTCCSSEE
T ss_pred EEcCCEEEEEEecCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCcHHHEEEecCCCCccEE
Confidence 999999999999999999999997643 4899999999999999999999999 99999999999998776 699
Q ss_pred EeeecccccCCCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHH
Q 005224 517 VADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIA 596 (707)
Q Consensus 517 l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~elltG~~pf~~~~~~~~~~~~~ 596 (707)
|+|||+++..... .......||+.|+|||++. ..++.++||||+||++|+|++|+.||...... +...
T Consensus 190 l~Dfg~a~~~~~~--------~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-~~~~-- 257 (504)
T 3q5i_A 190 IVDFGLSSFFSKD--------YKLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQ-DIIK-- 257 (504)
T ss_dssp ECCCTTCEECCTT--------SCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHH--
T ss_pred EEECCCCEEcCCC--------CccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHH--
Confidence 9999999876432 1223456999999999987 46899999999999999999999999754321 1111
Q ss_pred hhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCC
Q 005224 597 YQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPP 676 (707)
Q Consensus 597 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~ 676 (707)
.+.... . +.... .....++.+.+||.+||+.||++||
T Consensus 258 ---------------------------~i~~~~---~--~~~~~-----------~~~~~s~~~~~li~~~L~~dp~~R~ 294 (504)
T 3q5i_A 258 ---------------------------KVEKGK---Y--YFDFN-----------DWKNISDEAKELIKLMLTYDYNKRC 294 (504)
T ss_dssp ---------------------------HHHHCC---C--CCCHH-----------HHTTSCHHHHHHHHHHTCSSTTTSC
T ss_pred ---------------------------HHHcCC---C--CCCcc-----------ccCCCCHHHHHHHHHHcCCChhHCC
Confidence 011000 0 00000 0012233455799999999999999
Q ss_pred CCCcCCCCCCCCCCCC
Q 005224 677 SSSSMLKHPYVSSDVS 692 (707)
Q Consensus 677 sa~e~L~Hp~f~~~~~ 692 (707)
|++|+|+||||.....
T Consensus 295 t~~e~l~h~~~~~~~~ 310 (504)
T 3q5i_A 295 TAEEALNSRWIKKYAN 310 (504)
T ss_dssp CHHHHHTSHHHHHTCC
T ss_pred CHHHHhcCHhhhhchh
Confidence 9999999999976543
No 179
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=3e-41 Score=370.28 Aligned_cols=260 Identities=23% Similarity=0.398 Sum_probs=195.4
Q ss_pred HHhcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCCh--------hhHHHHHHHHHHHHccCCCcceeEEEEEEe
Q 005224 372 LATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--------QGEKEFLTEIQFLSRLHHRNLVSLVGYCDE 442 (707)
Q Consensus 372 ~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~--------~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~ 442 (707)
...++|.+.+.||+|+||+||+|... +++.||||++..... .....+.+|++++++++||||+++++++.
T Consensus 132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~- 210 (419)
T 3i6u_A 132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD- 210 (419)
T ss_dssp HHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE-
T ss_pred hhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe-
Confidence 34678999999999999999999965 689999999865321 11234789999999999999999999985
Q ss_pred CCeEEEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCC---CcEEEee
Q 005224 443 EGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHK---FTAKVAD 519 (707)
Q Consensus 443 ~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~---~~~kl~D 519 (707)
.+..++||||+++|+|.+++... ..+++..++.++.|++.||+|||+.+ |+||||||+|||++.+ +.+||+|
T Consensus 211 ~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~LH~~~---ivHrDlkp~NIll~~~~~~~~~kl~D 285 (419)
T 3i6u_A 211 AEDYYIVLELMEGGELFDKVVGN--KRLKEATCKLYFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITD 285 (419)
T ss_dssp SSEEEEEEECCTTCBGGGGTSSS--CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESSSSSSCCEEECC
T ss_pred cCceEEEEEcCCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChHhEEEecCCCcceEEEee
Confidence 45689999999999999988543 45999999999999999999999998 9999999999999754 4599999
Q ss_pred ecccccCCCCCCCCccccceecccccCCCccchhhhcc---CCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHH
Q 005224 520 FGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT---HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIA 596 (707)
Q Consensus 520 FGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~s~~sDVwS~Gvll~elltG~~pf~~~~~~~~~~~~~ 596 (707)
||+++..... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||...........
T Consensus 286 FG~a~~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~-- 355 (419)
T 3i6u_A 286 FGHSKILGET--------SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKD-- 355 (419)
T ss_dssp SSTTTSCC-------------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHHH--
T ss_pred cccceecCCC--------ccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHHH--
Confidence 9999876432 22334679999999999864 6788899999999999999999999964332100000
Q ss_pred hhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCC
Q 005224 597 YQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPP 676 (707)
Q Consensus 597 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~ 676 (707)
.+......+..+ ........+.+|+.+||..||++||
T Consensus 356 --------~i~~~~~~~~~~-----------------------------------~~~~~~~~~~~li~~~L~~dP~~Rp 392 (419)
T 3i6u_A 356 --------QITSGKYNFIPE-----------------------------------VWAEVSEKALDLVKKLLVVDPKARF 392 (419)
T ss_dssp --------HHHTTCCCCCHH-----------------------------------HHTTSCHHHHHHHHHHSCSSTTTSC
T ss_pred --------HHhcCCCCCCch-----------------------------------hhcccCHHHHHHHHHHccCChhHCc
Confidence 000000000000 0011233345788999999999999
Q ss_pred CCCcCCCCCCCCCC
Q 005224 677 SSSSMLKHPYVSSD 690 (707)
Q Consensus 677 sa~e~L~Hp~f~~~ 690 (707)
|++|+|+||||...
T Consensus 393 s~~e~l~hp~~~~~ 406 (419)
T 3i6u_A 393 TTEEALRHPWLQDE 406 (419)
T ss_dssp CHHHHHHSGGGCCH
T ss_pred CHHHHhCCcccCCh
Confidence 99999999999753
No 180
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.3e-39 Score=346.39 Aligned_cols=263 Identities=26% Similarity=0.370 Sum_probs=206.1
Q ss_pred HHHhcCCCccceEeeeCceEEEEEEeCCCcEEEEEEeccCChhhHHHHHHHHHHHHcc--CCCcceeEEEEEEeC----C
Q 005224 371 ALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL--HHRNLVSLVGYCDEE----G 444 (707)
Q Consensus 371 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l--~H~nIv~l~~~~~~~----~ 444 (707)
....++|++.+.||+|+||.||+|... ++.||||++... ....+..|.+++... +||||+++++++... .
T Consensus 33 ~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~ 108 (337)
T 3mdy_A 33 RTIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTT---EEASWFRETEIYQTVLMRHENILGFIAADIKGTGSWT 108 (337)
T ss_dssp TTHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGC
T ss_pred cccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEecc---ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCC
Confidence 344578999999999999999999985 899999998643 234555666666665 899999999999887 7
Q ss_pred eEEEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhC--------CCCCeEecCCCCCCEEEcCCCcEE
Q 005224 445 EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTE--------ADPPVFHRDIKASNILLDHKFTAK 516 (707)
Q Consensus 445 ~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~--------~~~~ivH~Dlkp~NILl~~~~~~k 516 (707)
..++||||+++|+|.++++.. .+++..++.++.|++.||+|||+. + |+||||||+|||++.++.+|
T Consensus 109 ~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~---ivH~Dikp~Nill~~~~~~k 182 (337)
T 3mdy_A 109 QLYLITDYHENGSLYDYLKST---TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPA---IAHRDLKSKNILVKKNGTCC 182 (337)
T ss_dssp EEEEEECCCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCC---EECSCCCGGGEEECTTSCEE
T ss_pred ceEEEEeccCCCcHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCC---EEecccchHHEEECCCCCEE
Confidence 899999999999999999654 499999999999999999999988 6 99999999999999999999
Q ss_pred EeeecccccCCCCCCCCccccceecccccCCCccchhhhccCCCCCc------hhhHHHHHHHHHHHcC----------C
Q 005224 517 VADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDK------SDVYSLGVVFLELLTG----------M 580 (707)
Q Consensus 517 l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~------sDVwS~Gvll~elltG----------~ 580 (707)
|+|||+++......... ........||+.|+|||++.+...+.+ +|||||||++|||++| .
T Consensus 183 l~Dfg~a~~~~~~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~ 259 (337)
T 3mdy_A 183 IADLGLAVKFISDTNEV---DIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQ 259 (337)
T ss_dssp ECCCTTCEECC------------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCC
T ss_pred EEeCCCceeeccccccc---cCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCccccccccc
Confidence 99999997654322110 111224578999999999988776665 9999999999999999 6
Q ss_pred CCCCCCch---hHHHHHHHhhcccchhhccCCCCCCC-----hHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhc
Q 005224 581 QPISHGKN---IVREVNIAYQSSMMFSVIDGNMGSYP-----SECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNM 652 (707)
Q Consensus 581 ~pf~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~ 652 (707)
.||..... .......... ........+ .+++..+.+++.+||+.+|.+||++.++++.|+.+.+.
T Consensus 260 ~p~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~ 332 (337)
T 3mdy_A 260 LPYHDLVPSDPSYEDMREIVC-------IKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSES 332 (337)
T ss_dssp CTTTTTSCSSCCHHHHHHHHT-------TSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred ccHhhhcCCCCchhhhHHHHh-------hhccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhh
Confidence 66643211 1111111111 111112222 37889999999999999999999999999999988764
Q ss_pred C
Q 005224 653 M 653 (707)
Q Consensus 653 ~ 653 (707)
.
T Consensus 333 ~ 333 (337)
T 3mdy_A 333 Q 333 (337)
T ss_dssp T
T ss_pred c
Confidence 3
No 181
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=3.8e-41 Score=376.89 Aligned_cols=259 Identities=24% Similarity=0.379 Sum_probs=208.3
Q ss_pred hcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCC---hhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEE
Q 005224 374 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 449 (707)
Q Consensus 374 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV 449 (707)
.++|++.+.||+|+||+||+|... +|+.||||++.... ....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 104 (484)
T 3nyv_A 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLV 104 (484)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 457899999999999999999976 78999999986532 23457899999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEE---cCCCcEEEeeecccccC
Q 005224 450 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILL---DHKFTAKVADFGLSRLA 526 (707)
Q Consensus 450 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl---~~~~~~kl~DFGla~~~ 526 (707)
|||+.+|+|.+++... ..+++..++.++.||+.||+|||+++ |+||||||+|||+ +.++.+||+|||+++..
T Consensus 105 ~e~~~~~~L~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~ 179 (484)
T 3nyv_A 105 GEVYTGGELFDEIISR--KRFSEVDAARIIRQVLSGITYMHKNK---IVHRDLKPENLLLESKSKDANIRIIDFGLSTHF 179 (484)
T ss_dssp ECCCCSCBHHHHHHTC--SCCBHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESSSSTTCCEEECCTTHHHHB
T ss_pred EecCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEc
Confidence 9999999999999654 45999999999999999999999999 9999999999999 56789999999999876
Q ss_pred CCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhc
Q 005224 527 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVI 606 (707)
Q Consensus 527 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~ 606 (707)
.... ......||+.|+|||++.+ .++.++||||+||++|||++|+.||...... +....
T Consensus 180 ~~~~--------~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-~~~~~----------- 238 (484)
T 3nyv_A 180 EASK--------KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEY-DILKK----------- 238 (484)
T ss_dssp CCCC--------SHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHH-----------
T ss_pred cccc--------ccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHH-HHHHH-----------
Confidence 4321 2334569999999999876 6899999999999999999999999754321 11110
Q ss_pred cCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCCCCCC
Q 005224 607 DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPY 686 (707)
Q Consensus 607 ~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hp~ 686 (707)
+........ .|. ....++.+.+||.+||+.||++|||++|+|+|||
T Consensus 239 -----------------i~~~~~~~~---~~~--------------~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h~~ 284 (484)
T 3nyv_A 239 -----------------VEKGKYTFE---LPQ--------------WKKVSESAKDLIRKMLTYVPSMRISARDALDHEW 284 (484)
T ss_dssp -----------------HHHCCCCCC---SGG--------------GGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSHH
T ss_pred -----------------HHcCCCCCC---Ccc--------------cccCCHHHHHHHHHHCCCChhHCcCHHHHhhChh
Confidence 000000000 000 0111233457899999999999999999999999
Q ss_pred CCCCCC
Q 005224 687 VSSDVS 692 (707)
Q Consensus 687 f~~~~~ 692 (707)
|.....
T Consensus 285 ~~~~~~ 290 (484)
T 3nyv_A 285 IQTYTK 290 (484)
T ss_dssp HHHHTC
T ss_pred hccccc
Confidence 976443
No 182
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=5.2e-41 Score=362.66 Aligned_cols=281 Identities=20% Similarity=0.335 Sum_probs=207.5
Q ss_pred hcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCC--hhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeE----
Q 005224 374 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQ---- 446 (707)
Q Consensus 374 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~---- 446 (707)
.++|...+.||+|+||+||+|... +|+.||||++.... ....+.+.+|+.+++.++||||+++++++...+..
T Consensus 41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 120 (371)
T 4exu_A 41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 120 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCC
T ss_pred cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccce
Confidence 468889999999999999999965 79999999997643 23356788999999999999999999999877654
Q ss_pred --EEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccc
Q 005224 447 --MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSR 524 (707)
Q Consensus 447 --~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~ 524 (707)
++||||+. ++|.+++. ..+++..++.++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++
T Consensus 121 ~~~lv~e~~~-~~l~~~~~----~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIll~~~~~~kL~Dfg~a~ 192 (371)
T 4exu_A 121 DFYLVMPFMQ-TDLQKIMG----MEFSEEKIQYLVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLAR 192 (371)
T ss_dssp CCEEEEECCC-EEHHHHTT----SCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECSTTCC-
T ss_pred eEEEEEcccc-ccHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHHCC---CcCCCcCHHHeEECCCCCEEEEecCccc
Confidence 99999996 68888873 23899999999999999999999998 9999999999999999999999999997
Q ss_pred cCCCCCCCCccccceecccccCCCccchhhhcc-CCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhc-ccc
Q 005224 525 LAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQS-SMM 602 (707)
Q Consensus 525 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDVwS~Gvll~elltG~~pf~~~~~~~~~~~~~~~~-~~~ 602 (707)
.... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||........ ....... ...
T Consensus 193 ~~~~----------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~-~~~i~~~~~~~ 261 (371)
T 4exu_A 193 HADA----------EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQ-LTQILKVTGVP 261 (371)
T ss_dssp -----------------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHHHCCC
T ss_pred cccc----------CcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHH-HHHHHHHhCCC
Confidence 6432 1234568999999999987 7899999999999999999999999976543221 1111110 000
Q ss_pred hhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCC
Q 005224 603 FSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSML 682 (707)
Q Consensus 603 ~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L 682 (707)
..... ..........+ ... .....+....+ ..+..++.+.+||.+||+.||++|||++|+|
T Consensus 262 ~~~~~---~~~~~~~~~~~---~~~---~~~~~~~~~~~----------~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell 322 (371)
T 4exu_A 262 GTEFV---QKLNDKAAKSY---IQS---LPQTPRKDFTQ----------LFPRASPQAADLLEKMLELDVDKRLTAAQAL 322 (371)
T ss_dssp CHHHH---TTCSCHHHHHH---HHH---SCCCCCCCHHH----------HSTTSCHHHHHHHHHHSCSCTTTSCCHHHHH
T ss_pred cHHHH---HHhhhhhhhhh---hhc---cCCCcchhHHH----------hccccChHHHHHHHHHCCCChhhcCCHHHHh
Confidence 00000 00011111111 111 11111222211 2234455667899999999999999999999
Q ss_pred CCCCCCCCCC
Q 005224 683 KHPYVSSDVS 692 (707)
Q Consensus 683 ~Hp~f~~~~~ 692 (707)
+||||+.-..
T Consensus 323 ~hp~f~~~~~ 332 (371)
T 4exu_A 323 THPFFEPFRD 332 (371)
T ss_dssp TSGGGTTTCC
T ss_pred cCcccccCCC
Confidence 9999986433
No 183
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=8.1e-40 Score=341.82 Aligned_cols=264 Identities=26% Similarity=0.381 Sum_probs=212.0
Q ss_pred CCCccceEeeeCceEEEEEEeC-C---CcEEEEEEeccCCh-hhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeE-EEE
Q 005224 376 NFNSSTQIGQGGYGKVYKGILP-D---GTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQ-MLV 449 (707)
Q Consensus 376 ~~~~~~~lG~G~~g~Vy~~~~~-~---~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~-~lV 449 (707)
.|...++||+|+||+||+|.+. + +..||+|++..... ...+.+.+|+.+++.++||||+++++++.+.+.. ++|
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v 101 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVL 101 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEE
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEE
Confidence 4556789999999999999853 2 33799999876433 3456789999999999999999999999766655 999
Q ss_pred EecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCC
Q 005224 450 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 529 (707)
Q Consensus 450 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~ 529 (707)
|||+.+|+|.+++... ...+++..++.++.|++.||+|||+.+ |+||||||+||++++++.+||+|||+++.....
T Consensus 102 ~e~~~~~~L~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~ 177 (298)
T 3pls_A 102 LPYMCHGDLLQFIRSP-QRNPTVKDLISFGLQVARGMEYLAEQK---FVHRDLAARNCMLDESFTVKVADFGLARDILDR 177 (298)
T ss_dssp ECCCTTCBHHHHHHCT-TCCCBHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTCCEEECCTTSSCTTTTG
T ss_pred EecccCCCHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCcceEEEcCCCcEEeCcCCCcccccCC
Confidence 9999999999999763 346899999999999999999999999 999999999999999999999999999865432
Q ss_pred CCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCC
Q 005224 530 DIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGN 609 (707)
Q Consensus 530 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 609 (707)
... .........+++.|+|||.+.+..++.++|||||||++|||++|..|+....+....... +....
T Consensus 178 ~~~---~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~~~~---------~~~~~ 245 (298)
T 3pls_A 178 EYY---SVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHF---------LAQGR 245 (298)
T ss_dssp GGG---CSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGHHHH---------HHTTC
T ss_pred ccc---ccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHHHHHH---------hhcCC
Confidence 110 112233456788999999999999999999999999999999966665443332221111 11122
Q ss_pred CCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCC
Q 005224 610 MGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPE 655 (707)
Q Consensus 610 ~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~ 655 (707)
....+..++..+.+++..|++.+|.+||++.++++.|+++...+..
T Consensus 246 ~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l~~ 291 (298)
T 3pls_A 246 RLPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSALLG 291 (298)
T ss_dssp CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHCCS
T ss_pred CCCCCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHHhc
Confidence 2334555667899999999999999999999999999998876644
No 184
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=4e-40 Score=341.08 Aligned_cols=200 Identities=30% Similarity=0.461 Sum_probs=173.8
Q ss_pred hcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCCh---hhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEE
Q 005224 374 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 449 (707)
Q Consensus 374 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV 449 (707)
.++|++.+.||+|+||+||+|... +++.||||++..... .....+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 87 (279)
T 3fdn_A 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 87 (279)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEE
Confidence 467899999999999999999975 678999999865322 2246788999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCC
Q 005224 450 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 529 (707)
Q Consensus 450 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~ 529 (707)
|||+++++|.+++.... .+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 88 ~e~~~~~~l~~~l~~~~--~~~~~~~~~~~~qi~~~l~~LH~~~---i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~ 162 (279)
T 3fdn_A 88 LEYAPLGTVYRELQKLS--KFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS 162 (279)
T ss_dssp ECCCTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTTT---CEECCCCGGGEEECTTSCEEECSCCEESCC---
T ss_pred EecCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCC---EecccCChHhEEEcCCCCEEEEeccccccCCcc
Confidence 99999999999997643 4899999999999999999999998 999999999999999999999999998654321
Q ss_pred CCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCc
Q 005224 530 DIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 587 (707)
Q Consensus 530 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~elltG~~pf~~~~ 587 (707)
......|++.|+|||++.+..++.++||||||+++|||++|+.||....
T Consensus 163 ---------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~ 211 (279)
T 3fdn_A 163 ---------RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT 211 (279)
T ss_dssp --------------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSS
T ss_pred ---------cccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCc
Confidence 2234568999999999999999999999999999999999999997543
No 185
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=3.5e-40 Score=344.68 Aligned_cols=260 Identities=25% Similarity=0.348 Sum_probs=206.2
Q ss_pred hcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCC---------hhhHHHHHHHHHHHHccC-CCcceeEEEEEEe
Q 005224 374 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---------LQGEKEFLTEIQFLSRLH-HRNLVSLVGYCDE 442 (707)
Q Consensus 374 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~---------~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~ 442 (707)
.++|++.+.||+|+||.||+|... +++.||||++.... ....+.+.+|+++++++. ||||+++++++..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 95 (298)
T 1phk_A 16 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET 95 (298)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEC
T ss_pred hhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeecc
Confidence 468999999999999999999975 78999999987543 112356789999999995 9999999999999
Q ss_pred CCeEEEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecc
Q 005224 443 EGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGL 522 (707)
Q Consensus 443 ~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGl 522 (707)
.+..++||||+++++|.+++... ..+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+
T Consensus 96 ~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~ 170 (298)
T 1phk_A 96 NTFFFLVFDLMKKGELFDYLTEK--VTLSEKETRKIMRALLEVICALHKLN---IVHRDLKPENILLDDDMNIKLTDFGF 170 (298)
T ss_dssp SSEEEEEEECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTT
T ss_pred CCeEEEEEeccCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcceEEEcCCCcEEEecccc
Confidence 99999999999999999999764 35899999999999999999999999 99999999999999999999999999
Q ss_pred cccCCCCCCCCccccceecccccCCCccchhhhc------cCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHH
Q 005224 523 SRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFL------THKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIA 596 (707)
Q Consensus 523 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~s~~sDVwS~Gvll~elltG~~pf~~~~~~~~~~~~~ 596 (707)
+....... ......|++.|+|||++. ...++.++|||||||++|||++|+.||........ ..
T Consensus 171 ~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~-~~-- 239 (298)
T 1phk_A 171 SCQLDPGE--------KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLM-LR-- 239 (298)
T ss_dssp CEECCTTC--------CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HH--
T ss_pred hhhcCCCc--------ccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHHH-HH--
Confidence 98754321 223456899999999985 45688999999999999999999999965432110 00
Q ss_pred hhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCC
Q 005224 597 YQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPP 676 (707)
Q Consensus 597 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~ 676 (707)
.+........+ |.. ...+....+++.+||..||++||
T Consensus 240 --------------------------~~~~~~~~~~~---~~~--------------~~~~~~l~~li~~~l~~dp~~Rp 276 (298)
T 1phk_A 240 --------------------------MIMSGNYQFGS---PEW--------------DDYSDTVKDLVSRFLVVQPQKRY 276 (298)
T ss_dssp --------------------------HHHHTCCCCCT---TTG--------------GGSCHHHHHHHHHHCCSSGGGSC
T ss_pred --------------------------HHhcCCcccCc---ccc--------------cccCHHHHHHHHHHccCCcccCC
Confidence 00110000000 000 01122234688889999999999
Q ss_pred CCCcCCCCCCCCCCCC
Q 005224 677 SSSSMLKHPYVSSDVS 692 (707)
Q Consensus 677 sa~e~L~Hp~f~~~~~ 692 (707)
|++|+|+||||.....
T Consensus 277 s~~~ll~h~~~~~~~~ 292 (298)
T 1phk_A 277 TAEEALAHPFFQQYVV 292 (298)
T ss_dssp CHHHHTTSGGGCTTC-
T ss_pred CHHHHHhChHhhhccc
Confidence 9999999999986654
No 186
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=2.6e-40 Score=354.45 Aligned_cols=295 Identities=21% Similarity=0.301 Sum_probs=210.5
Q ss_pred hcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCC-hhhHHHHHHHHHHHHccCCCcceeEEEEEEeC-----CeE
Q 005224 374 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE-----GEQ 446 (707)
Q Consensus 374 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~-----~~~ 446 (707)
.++|++.+.||+|+||+||+|... +|+.||||++.... ......+.+|+++++.++||||+++++++... ...
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 89 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEV 89 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCE
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceE
Confidence 468999999999999999999975 78999999997533 33356788999999999999999999998654 678
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccC
Q 005224 447 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 526 (707)
Q Consensus 447 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~ 526 (707)
++||||+. ++|.+++... .+++..++.++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 90 ~lv~e~~~-~~L~~~~~~~---~~~~~~~~~~~~qi~~~L~~LH~~~---ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~ 162 (353)
T 2b9h_A 90 YIIQELMQ-TDLHRVISTQ---MLSDDHIQYFIYQTLRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARII 162 (353)
T ss_dssp EEEECCCS-EEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEEeccC-ccHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEEcCCCcEEEEeccccccc
Confidence 99999996 6999998653 5899999999999999999999998 999999999999999999999999999876
Q ss_pred CCCCCCCccc---cceecccccCCCccchhhhcc-CCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccc
Q 005224 527 PVPDIEGIVP---AHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMM 602 (707)
Q Consensus 527 ~~~~~~~~~~---~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDVwS~Gvll~elltG~~pf~~~~~~~~~~~~~~~~~~~ 602 (707)
.......... ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||........ ..........
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~~~~~~~~ 241 (353)
T 2b9h_A 163 DESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQ-LLLIFGIIGT 241 (353)
T ss_dssp C----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHHHCC
T ss_pred ccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHH-HHHHHHHhCC
Confidence 5322111000 011233568999999998765 7789999999999999999999999976543221 1111000000
Q ss_pred hhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCC
Q 005224 603 FSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSML 682 (707)
Q Consensus 603 ~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L 682 (707)
.. .+.......... ..+.... +...+ +.... ...+..++...+||.+||..||++|||++|+|
T Consensus 242 ~~-~~~~~~~~~~~~---~~~~~~~-~~~~~--~~~~~----------~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell 304 (353)
T 2b9h_A 242 PH-SDNDLRCIESPR---AREYIKS-LPMYP--AAPLE----------KMFPRVNPKGIDLLQRMLVFDPAKRITAKEAL 304 (353)
T ss_dssp CC-STTTTTTCCCHH---HHHHHHT-SCCCC--CCCHH----------HHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHH
T ss_pred Cc-hhccccccccch---hhHHhhc-ccCCC--Ccchh----------hhcccCCHHHHHHHHHhcCcCcccCCCHHHHh
Confidence 00 000000000010 0111100 00000 11111 11234445566899999999999999999999
Q ss_pred CCCCCCCCCCC
Q 005224 683 KHPYVSSDVSG 693 (707)
Q Consensus 683 ~Hp~f~~~~~~ 693 (707)
+||||......
T Consensus 305 ~hp~~~~~~~~ 315 (353)
T 2b9h_A 305 EHPYLQTYHDP 315 (353)
T ss_dssp TSGGGTTTCCT
T ss_pred cCccccccCCc
Confidence 99999876543
No 187
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=2.9e-40 Score=342.58 Aligned_cols=250 Identities=27% Similarity=0.412 Sum_probs=208.2
Q ss_pred HhcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHccCCCcceeEEEEEEe---------
Q 005224 373 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE--------- 442 (707)
Q Consensus 373 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~--------- 442 (707)
...+|+..+.||+|+||.||+|... +++.||+|++.... +.+.+|++++++++||||+++++++..
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 84 (284)
T 2a19_B 9 FGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSS 84 (284)
T ss_dssp HHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-----
T ss_pred hccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccc
Confidence 3457899999999999999999976 79999999997643 356789999999999999999998854
Q ss_pred -------CCeEEEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcE
Q 005224 443 -------EGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTA 515 (707)
Q Consensus 443 -------~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ 515 (707)
....++||||+++++|.+++.......+++..++.++.|++.||.|||+.+ |+||||||+||++++++.+
T Consensus 85 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~ 161 (284)
T 2a19_B 85 KNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKK---LINRDLKPSNIFLVDTKQV 161 (284)
T ss_dssp ----CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEE
T ss_pred ccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeccCCHHHEEEcCCCCE
Confidence 345799999999999999998765567999999999999999999999998 9999999999999999999
Q ss_pred EEeeecccccCCCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHH
Q 005224 516 KVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNI 595 (707)
Q Consensus 516 kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~elltG~~pf~~~~~~~~~~~~ 595 (707)
||+|||++....... ......|++.|+|||++.+..++.++|||||||++|||++|..|+....... ..
T Consensus 162 kl~Dfg~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~---~~ 230 (284)
T 2a19_B 162 KIGDFGLVTSLKNDG--------KRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSKFF---TD 230 (284)
T ss_dssp EECCCTTCEESSCCS--------CCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHHHHH---HH
T ss_pred EECcchhheeccccc--------cccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHHHHH---HH
Confidence 999999998764321 1233468999999999999999999999999999999999988874221111 10
Q ss_pred HhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhc
Q 005224 596 AYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNM 652 (707)
Q Consensus 596 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~ 652 (707)
+..+ ..+..++..+.+++.+|++.+|.+||++.++++.+..+...
T Consensus 231 ---------~~~~---~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~ 275 (284)
T 2a19_B 231 ---------LRDG---IISDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKS 275 (284)
T ss_dssp ---------HHTT---CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC-
T ss_pred ---------hhcc---cccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhC
Confidence 1111 12233456788999999999999999999999999887654
No 188
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=3e-42 Score=373.25 Aligned_cols=197 Identities=17% Similarity=0.188 Sum_probs=164.7
Q ss_pred hcCCCccceEeeeCceEEEEEEe-CCCcEEEEEEeccC---ChhhHHHHHHHHH---HHHccCCCcceeEE-------EE
Q 005224 374 TNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEG---SLQGEKEFLTEIQ---FLSRLHHRNLVSLV-------GY 439 (707)
Q Consensus 374 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~---~~~~~~~~~~E~~---~l~~l~H~nIv~l~-------~~ 439 (707)
.++|.+.+.||+|+||+||+|.. .+|+.||||++... .....+.+.+|++ .+++++||||++++ ++
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 46788899999999999999996 47999999998742 3334578899994 55556899999998 77
Q ss_pred EEeCCe-----------------EEEEEecCCCCCHHHHHhhcCC-----CCcCHHHHHHHHHHHHHHHHHHHhCCCCCe
Q 005224 440 CDEEGE-----------------QMLVYEFMSNGTLRDQLSAKSK-----EPLGFAMRLSIALGSSRGILYLHTEADPPV 497 (707)
Q Consensus 440 ~~~~~~-----------------~~lV~E~~~~gsL~~~l~~~~~-----~~l~~~~~~~i~~~ia~gL~yLH~~~~~~i 497 (707)
+...+. .++||||+ +|+|.+++..... ..+++..++.++.||++||+|||+++ |
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---i 227 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG---L 227 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTT---E
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCC---e
Confidence 765542 78999999 6899999976321 23456888999999999999999999 9
Q ss_pred EecCCCCCCEEEcCCCcEEEeeecccccCCCCCCCCccccceecccccCCCccchhhhccC-----------CCCCchhh
Q 005224 498 FHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTH-----------KLTDKSDV 566 (707)
Q Consensus 498 vH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~s~~sDV 566 (707)
+||||||+|||++.++.+||+|||+++... .......| +.|+|||++.+. .++.++||
T Consensus 228 vHrDikp~NIll~~~~~~kL~DFG~a~~~~----------~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Dv 296 (377)
T 3byv_A 228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDG----------ARVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDA 296 (377)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETT----------CEEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHH
T ss_pred ecCCCCHHHEEEcCCCCEEEEechhheecC----------CcccCCCC-cCccChhhhcccccccccccccccCChhhhH
Confidence 999999999999999999999999998532 12334567 999999999987 89999999
Q ss_pred HHHHHHHHHHHcCCCCCCC
Q 005224 567 YSLGVVFLELLTGMQPISH 585 (707)
Q Consensus 567 wS~Gvll~elltG~~pf~~ 585 (707)
|||||++|||++|+.||..
T Consensus 297 wSlG~il~elltg~~Pf~~ 315 (377)
T 3byv_A 297 WALGLVIYWIWCADLPITK 315 (377)
T ss_dssp HHHHHHHHHHHHSSCCC--
T ss_pred HHHHHHHHHHHHCCCCCcc
Confidence 9999999999999999954
No 189
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=1.2e-39 Score=340.26 Aligned_cols=268 Identities=20% Similarity=0.282 Sum_probs=211.7
Q ss_pred hcCCCccceEeeeCceEEEEEEe-CCCcEEEEEEeccCChhhHHHHHHHHHHHHccCCCcceeEEEEE-EeCCeEEEEEe
Q 005224 374 TNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYC-DEEGEQMLVYE 451 (707)
Q Consensus 374 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~-~~~~~~~lV~E 451 (707)
.++|++.+.||+|+||.||+|.. .+++.||||++..... .+.+.+|+++++.++|++++..+.++ ...+..++|||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 85 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME 85 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS--CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc--hhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEE
Confidence 46899999999999999999996 5899999999875432 24688999999999988877666655 66778899999
Q ss_pred cCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEE---cCCCcEEEeeecccccCCC
Q 005224 452 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILL---DHKFTAKVADFGLSRLAPV 528 (707)
Q Consensus 452 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl---~~~~~~kl~DFGla~~~~~ 528 (707)
|+ +++|.+++... ...+++..++.++.|++.||+|||+++ |+||||||+|||+ ++++.+||+|||+++....
T Consensus 86 ~~-~~~L~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~ 160 (296)
T 3uzp_A 86 LL-GPSLEDLFNFC-SRKFSLKTVLLLADQMISRIEYIHSKN---FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRD 160 (296)
T ss_dssp CC-CCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECCGGGTTCEEECCCTTCEECBC
T ss_pred ec-CCCHHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHeEEecCCCCCeEEEeeCCCcccccc
Confidence 99 89999999753 346999999999999999999999999 9999999999999 5889999999999987654
Q ss_pred CCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCch-----hHHHHHHHhhcccch
Q 005224 529 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKN-----IVREVNIAYQSSMMF 603 (707)
Q Consensus 529 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~elltG~~pf~~~~~-----~~~~~~~~~~~~~~~ 603 (707)
.......+........||+.|+|||++.+..++.++|||||||++|||++|+.||..... ...........
T Consensus 161 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~---- 236 (296)
T 3uzp_A 161 ARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMS---- 236 (296)
T ss_dssp TTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHH----
T ss_pred cccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccC----
Confidence 332211111223456799999999999999999999999999999999999999975321 11111110000
Q ss_pred hhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCC
Q 005224 604 SVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPES 656 (707)
Q Consensus 604 ~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~ 656 (707)
......+..++..+.+++.+||+.+|.+||++.++++.|+.+.......
T Consensus 237 ----~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~~~ 285 (296)
T 3uzp_A 237 ----TPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFS 285 (296)
T ss_dssp ----SCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHTTCC
T ss_pred ----CchHHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhcCCc
Confidence 0000011334577999999999999999999999999999988765443
No 190
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=8.9e-41 Score=357.19 Aligned_cols=269 Identities=17% Similarity=0.168 Sum_probs=202.1
Q ss_pred hcCCCccceEeeeCceEEEEEEeC----CCcEEEEEEeccCChhh-----------HHHHHHHHHHHHccCCCcceeEEE
Q 005224 374 TNNFNSSTQIGQGGYGKVYKGILP----DGTVVAVKRAQEGSLQG-----------EKEFLTEIQFLSRLHHRNLVSLVG 438 (707)
Q Consensus 374 ~~~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~l~~~~~~~-----------~~~~~~E~~~l~~l~H~nIv~l~~ 438 (707)
.++|.+.+.||+|+||+||+|... ++..||||+........ ...+.+|+..++.++||||+++++
T Consensus 36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~ 115 (345)
T 2v62_A 36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG 115 (345)
T ss_dssp SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence 357889999999999999999975 57889999987643211 124667889999999999999999
Q ss_pred EEEe----CCeEEEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCC-
Q 005224 439 YCDE----EGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKF- 513 (707)
Q Consensus 439 ~~~~----~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~- 513 (707)
++.. ....++||||+ +++|.+++.... .+++..++.++.||+.||+|||+.+ |+||||||+|||++.++
T Consensus 116 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~ 189 (345)
T 2v62_A 116 SGLTEFKGRSYRFMVMERL-GIDLQKISGQNG--TFKKSTVLQLGIRMLDVLEYIHENE---YVHGDIKAANLLLGYKNP 189 (345)
T ss_dssp EEEEESSSCEEEEEEEECE-EEEHHHHCBGGG--BCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEESSST
T ss_pred ccccccCCCcEEEEEEecc-CCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCcCHHHEEEccCCC
Confidence 9987 67899999999 999999997644 6999999999999999999999998 99999999999999887
Q ss_pred -cEEEeeecccccCCCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhH--
Q 005224 514 -TAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIV-- 590 (707)
Q Consensus 514 -~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~elltG~~pf~~~~~~~-- 590 (707)
.+||+|||+++....................||+.|+|||++.+..++.++|||||||++|||++|+.||.......
T Consensus 190 ~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~ 269 (345)
T 2v62_A 190 DQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVA 269 (345)
T ss_dssp TSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHH
T ss_pred CcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHH
Confidence 99999999998764322111111122245679999999999999999999999999999999999999995422111
Q ss_pred -HHHHHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 005224 591 -REVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 651 (707)
Q Consensus 591 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~ 651 (707)
........... ........ ....++..+.+++..||+.+|.+||++.++++.|+....
T Consensus 270 ~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~ 328 (345)
T 2v62_A 270 VQTAKTNLLDEL-PQSVLKWA--PSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHGI 328 (345)
T ss_dssp HHHHHHHHHHTT-THHHHHHS--CTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTCC
T ss_pred HHHHHHhhcccc-cHHHHhhc--cccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccCC
Confidence 11111111100 00000000 011345689999999999999999999999999986543
No 191
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=1.6e-40 Score=355.96 Aligned_cols=291 Identities=19% Similarity=0.277 Sum_probs=210.2
Q ss_pred hcCCCccceEeeeCceEEEEEEeC-CC-cEEEEEEeccCChhhHHHHHHHHHHHHccCCCc------ceeEEEEEEeCCe
Q 005224 374 TNNFNSSTQIGQGGYGKVYKGILP-DG-TVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRN------LVSLVGYCDEEGE 445 (707)
Q Consensus 374 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~-~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~n------Iv~l~~~~~~~~~ 445 (707)
.++|++.+.||+|+||+||+|... ++ +.||||++... ....+.+.+|+++++.++|++ ++.+++++...+.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 96 (355)
T 2eu9_A 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV-GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGH 96 (355)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTE
T ss_pred cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc-ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCe
Confidence 468999999999999999999974 44 78999999753 334567889999999997665 9999999999999
Q ss_pred EEEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEE----------------
Q 005224 446 QMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILL---------------- 509 (707)
Q Consensus 446 ~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl---------------- 509 (707)
.++||||+ ++++.+++.......+++..++.++.||+.||+|||+.+ |+||||||+|||+
T Consensus 97 ~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~---ivH~Dlkp~NIll~~~~~~~~~~~~~~~~ 172 (355)
T 2eu9_A 97 MCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQ---LTHTDLKPENILFVNSEFETLYNEHKSCE 172 (355)
T ss_dssp EEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEESCCCEEEEECCC-CCC
T ss_pred EEEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEeccccccccccccccc
Confidence 99999999 678888887766667999999999999999999999998 9999999999999
Q ss_pred ---cCCCcEEEeeecccccCCCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCC
Q 005224 510 ---DHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 586 (707)
Q Consensus 510 ---~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~elltG~~pf~~~ 586 (707)
+.++.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 173 ~~~~~~~~~kl~Dfg~~~~~~~~----------~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~ 242 (355)
T 2eu9_A 173 EKSVKNTSIRVADFGSATFDHEH----------HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTH 242 (355)
T ss_dssp EEEESCCCEEECCCTTCEETTSC----------CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred ccccCCCcEEEeecCcccccccc----------ccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCC
Confidence 67889999999999864321 23456899999999999999999999999999999999999999765
Q ss_pred chhHHHHHHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh----cCC---CCCCC
Q 005224 587 KNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN----MMP---ESDTK 659 (707)
Q Consensus 587 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~----~~~---~~~~~ 659 (707)
.......... .. ....|.......... .... ......+......+.+..... ... .....
T Consensus 243 ~~~~~~~~~~-------~~----~~~~p~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (355)
T 2eu9_A 243 ENREHLVMME-------KI----LGPIPSHMIHRTRKQ-KYFY-KGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQ 309 (355)
T ss_dssp SHHHHHHHHH-------HH----HCCCCHHHHHHCSCG-GGEE-TTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHH
T ss_pred CHHHHHHHHH-------HH----cCCCcHHHhhhccch-hhhc-ccccccccccchhccccccCCcccccccccchhHHH
Confidence 4422111100 00 011222211110000 0000 000000000000011111000 000 00123
Q ss_pred CCccccCCCCCCCCCCCCCCcCCCCCCCCCCCC
Q 005224 660 TPEFINSEHTSKEETPPSSSSMLKHPYVSSDVS 692 (707)
Q Consensus 660 ~~dll~~~L~~dP~~R~sa~e~L~Hp~f~~~~~ 692 (707)
+.+||.+||..||++|||++|+|+||||.+...
T Consensus 310 l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~ 342 (355)
T 2eu9_A 310 LFDLMRRMLEFDPAQRITLAEALLHPFFAGLTP 342 (355)
T ss_dssp HHHHHHHHTCSSTTTSCCHHHHTTSGGGGGCCH
T ss_pred HHHHHHHHhcCChhhCcCHHHHhcChhhcCCCh
Confidence 457999999999999999999999999987543
No 192
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=4.3e-40 Score=349.20 Aligned_cols=258 Identities=26% Similarity=0.426 Sum_probs=204.8
Q ss_pred hcCCCccceEeeeCceEEEEEEeC-CCc----EEEEEEeccC-ChhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEE
Q 005224 374 TNNFNSSTQIGQGGYGKVYKGILP-DGT----VVAVKRAQEG-SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQM 447 (707)
Q Consensus 374 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~----~vavK~l~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~ 447 (707)
.++|++.+.||+|+||+||+|.+. +++ .||+|.+... .....+.+.+|+.+++.++||||+++++++.... .+
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~ 92 (327)
T 3lzb_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ 92 (327)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EE
T ss_pred HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ce
Confidence 467999999999999999999964 444 3577877543 3344678999999999999999999999998754 78
Q ss_pred EEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCC
Q 005224 448 LVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAP 527 (707)
Q Consensus 448 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~ 527 (707)
+|+||+++|+|.+++.... ..+++..++.++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 93 ~v~~~~~~g~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~ 168 (327)
T 3lzb_A 93 LITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLG 168 (327)
T ss_dssp EEECCCSSCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEEETTEEEECCTTC-----
T ss_pred EEEEecCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHhhCC---CcCCCCCHHHEEEcCCCCEEEccCcceeEcc
Confidence 9999999999999997643 45999999999999999999999999 9999999999999999999999999998764
Q ss_pred CCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHhhcccchhhc
Q 005224 528 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVI 606 (707)
Q Consensus 528 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~ 606 (707)
.... ........+|+.|+|||++.+..++.++|||||||++|||++ |+.||.......- . ..+.
T Consensus 169 ~~~~-----~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~-~---------~~~~ 233 (327)
T 3lzb_A 169 AEEK-----EYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI-S---------SILE 233 (327)
T ss_dssp ----------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGH-H---------HHHH
T ss_pred Cccc-----cccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH-H---------HHHH
Confidence 3221 112233456788999999999999999999999999999999 9999975433111 0 1111
Q ss_pred cCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 005224 607 DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 651 (707)
Q Consensus 607 ~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~ 651 (707)
.......+..++..+.+++.+||+.+|.+||++.++++.|+.+..
T Consensus 234 ~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 278 (327)
T 3lzb_A 234 KGERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMAR 278 (327)
T ss_dssp TTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHT
T ss_pred cCCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence 222333455677789999999999999999999999999998764
No 193
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=1.4e-39 Score=342.24 Aligned_cols=261 Identities=23% Similarity=0.366 Sum_probs=203.2
Q ss_pred cCCCccceEeeeCceEEEEEEe-CCCcEEEEEEeccCC---hhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEE
Q 005224 375 NNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 450 (707)
Q Consensus 375 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~ 450 (707)
++|++.+.||+|+||.||+|.. .+|+.||||++.... ....+.+.+|++++++++||||+++++++...+..++||
T Consensus 32 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 111 (310)
T 2wqm_A 32 ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 111 (310)
T ss_dssp GGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEEE
Confidence 4688999999999999999996 479999999987532 334567899999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhh--cCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCC
Q 005224 451 EFMSNGTLRDQLSA--KSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 528 (707)
Q Consensus 451 E~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~ 528 (707)
||+++++|.+++.. .....+++..++.++.|+++||.|||+.+ |+||||||+||+++.++.+||+|||+++....
T Consensus 112 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~ 188 (310)
T 2wqm_A 112 ELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRR---VMHRDIKPANVFITATGVVKLGDLGLGRFFSS 188 (310)
T ss_dssp ECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCC--------
T ss_pred ecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCC---eeCCCCcHHHEEEcCCCCEEEEeccceeeecC
Confidence 99999999999965 23456899999999999999999999999 99999999999999999999999999976543
Q ss_pred CCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccC
Q 005224 529 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDG 608 (707)
Q Consensus 529 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 608 (707)
.. .......|++.|+|||++.+..++.++|||||||++|||++|+.||............... ..
T Consensus 189 ~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~--------~~ 253 (310)
T 2wqm_A 189 KT-------TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIE--------QC 253 (310)
T ss_dssp -----------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHHHH--------TT
T ss_pred CC-------ccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHHhh--------cc
Confidence 21 1123456899999999999999999999999999999999999999654322111111111 11
Q ss_pred CCCC-CChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcC
Q 005224 609 NMGS-YPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMM 653 (707)
Q Consensus 609 ~~~~-~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~ 653 (707)
.... ....++..+.+++..||+.+|.+||++.++++.|+++....
T Consensus 254 ~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~ 299 (310)
T 2wqm_A 254 DYPPLPSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACT 299 (310)
T ss_dssp CSCCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred cCCCCcccccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhh
Confidence 1111 12445678999999999999999999999999999887643
No 194
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=1.2e-40 Score=351.59 Aligned_cols=287 Identities=23% Similarity=0.357 Sum_probs=206.4
Q ss_pred hcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHccCCCcceeEEEEEE-----------
Q 005224 374 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCD----------- 441 (707)
Q Consensus 374 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~----------- 441 (707)
.++|++.+.||+|+||.||+|... +++.||||++........+.+.+|++++++++||||+++++++.
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 89 (320)
T 2i6l_A 10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVG 89 (320)
T ss_dssp TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC---
T ss_pred CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccc
Confidence 368899999999999999999976 58999999998766666778999999999999999999999873
Q ss_pred ---eCCeEEEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEc-CCCcEEE
Q 005224 442 ---EEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLD-HKFTAKV 517 (707)
Q Consensus 442 ---~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~-~~~~~kl 517 (707)
.....++||||++ |+|.+++.. ..+++..++.++.|+++||+|||+.+ |+||||||+||+++ +++.+||
T Consensus 90 ~~~~~~~~~lv~e~~~-~~L~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~kl 162 (320)
T 2i6l_A 90 SLTELNSVYIVQEYME-TDLANVLEQ---GPLLEEHARLFMYQLLRGLKYIHSAN---VLHRDLKPANLFINTEDLVLKI 162 (320)
T ss_dssp -CCSCSEEEEEEECCS-EEHHHHHTT---CCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSGGGEEEETTTTEEEE
T ss_pred cccccCceeEEeeccC-CCHHHHhhc---CCccHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCCeEEE
Confidence 3467899999997 699999954 35899999999999999999999999 99999999999997 5679999
Q ss_pred eeecccccCCCCCCCCccccceecccccCCCccchhhhcc-CCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHH
Q 005224 518 ADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIA 596 (707)
Q Consensus 518 ~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDVwS~Gvll~elltG~~pf~~~~~~~~~~~~~ 596 (707)
+|||+++........ ........++..|+|||++.+ ..++.++|||||||++|||++|+.||........ ....
T Consensus 163 ~Dfg~~~~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~-~~~~ 237 (320)
T 2i6l_A 163 GDFGLARIMDPHYSH----KGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQ-MQLI 237 (320)
T ss_dssp CCCTTCBCC------------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHH
T ss_pred ccCccccccCCCccc----ccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHH-HHHH
Confidence 999999875432110 112234457899999999876 7789999999999999999999999976544221 1111
Q ss_pred hhcccchhhccCCCCCCChHHHHHHHHHHHHhccc-CCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCC
Q 005224 597 YQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQD-ETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETP 675 (707)
Q Consensus 597 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~-~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R 675 (707)
... ......+...++...+...+.. ....+.... ...+..+....+|+.+||..||++|
T Consensus 238 ~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~li~~~L~~dP~~R 297 (320)
T 2i6l_A 238 LES----------IPVVHEEDRQELLSVIPVYIRNDMTEPHKPLT----------QLLPGISREAVDFLEQILTFSPMDR 297 (320)
T ss_dssp HHH----------SCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHH----------HHSTTCCHHHHHHHHTTSCSSGGGS
T ss_pred HHh----------cCCCchhhhhhhhhcCcccccccccCCCCChh----------HhcchhhHHHHHHHHHHcCCCcccc
Confidence 110 0111122222211110000000 000011111 1123344556789999999999999
Q ss_pred CCCCcCCCCCCCCCCCC
Q 005224 676 PSSSSMLKHPYVSSDVS 692 (707)
Q Consensus 676 ~sa~e~L~Hp~f~~~~~ 692 (707)
||++|+|+||||+....
T Consensus 298 pt~~ell~hp~~~~~~~ 314 (320)
T 2i6l_A 298 LTAEEALSHPYMSIYSF 314 (320)
T ss_dssp CCHHHHHTSHHHHTTCC
T ss_pred CCHHHHhCCcccccccC
Confidence 99999999999986544
No 195
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=6.9e-40 Score=350.01 Aligned_cols=252 Identities=22% Similarity=0.322 Sum_probs=200.5
Q ss_pred hcCCCccceEeeeCceEEEEEEeCCCcEEEEEEeccCC--hhhHHHHHHHHHHHHccCC--CcceeEEEEEEeCCeEEEE
Q 005224 374 TNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHH--RNLVSLVGYCDEEGEQMLV 449 (707)
Q Consensus 374 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~H--~nIv~l~~~~~~~~~~~lV 449 (707)
.++|++.+.||+|+||+||+|...+++.||||++.... ....+.+.+|+++++.++| +||+++++++...+..++|
T Consensus 8 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 87 (343)
T 3dbq_A 8 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 87 (343)
T ss_dssp SCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred cCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEE
Confidence 45789999999999999999998889999999987543 2334678999999999976 9999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCC
Q 005224 450 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 529 (707)
Q Consensus 450 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~ 529 (707)
||| .+++|.+++... ..+++..++.++.|++.||+|||+.+ |+||||||+|||++ ++.+||+|||+++.....
T Consensus 88 ~e~-~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~al~~lH~~~---iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~ 160 (343)
T 3dbq_A 88 MEC-GNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIV-DGMLKLIDFGIANQMQPD 160 (343)
T ss_dssp ECC-CSEEHHHHHHHS--CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEE-TTEEEECCCSSSCCC---
T ss_pred EeC-CCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCcceEEEE-CCcEEEeecccccccCcc
Confidence 995 588999999764 35899999999999999999999999 99999999999997 578999999999876432
Q ss_pred CCCCccccceecccccCCCccchhhhcc-----------CCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhh
Q 005224 530 DIEGIVPAHVSTVVKGTPGYLDPEYFLT-----------HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQ 598 (707)
Q Consensus 530 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~s~~sDVwS~Gvll~elltG~~pf~~~~~~~~~~~~~~~ 598 (707)
.. ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||....+..........
T Consensus 161 ~~-----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~ 235 (343)
T 3dbq_A 161 TT-----SVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIID 235 (343)
T ss_dssp --------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHC
T ss_pred cc-----cccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHHHHHHHhc
Confidence 21 112334579999999999975 67889999999999999999999999765443332222111
Q ss_pred cccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005224 599 SSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRE 645 (707)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~ 645 (707)
. .....++......+.+++..||+.+|.+||++.++++.
T Consensus 236 ~--------~~~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~h 274 (343)
T 3dbq_A 236 P--------NHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 274 (343)
T ss_dssp T--------TSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred C--------CcccCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhC
Confidence 1 11223444445678899999999999999999998764
No 196
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=6.5e-40 Score=347.72 Aligned_cols=258 Identities=29% Similarity=0.479 Sum_probs=210.4
Q ss_pred cCCCccceEeeeCceEEEEEEeC-CCcE--EEEEEeccCC-hhhHHHHHHHHHHHHcc-CCCcceeEEEEEEeCCeEEEE
Q 005224 375 NNFNSSTQIGQGGYGKVYKGILP-DGTV--VAVKRAQEGS-LQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQMLV 449 (707)
Q Consensus 375 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~--vavK~l~~~~-~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lV 449 (707)
++|+..+.||+|+||.||+|... ++.. ||||++.... ....+.+.+|+++++++ +||||+++++++.+.+..++|
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 104 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA 104 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEE
Confidence 67889999999999999999964 5664 4999887532 23345789999999999 899999999999999999999
Q ss_pred EecCCCCCHHHHHhhcC--------------CCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcE
Q 005224 450 YEFMSNGTLRDQLSAKS--------------KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTA 515 (707)
Q Consensus 450 ~E~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ 515 (707)
|||+++|+|.+++.... ...+++..++.++.|+++||+|||+.+ |+||||||+||+++.++.+
T Consensus 105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIl~~~~~~~ 181 (327)
T 1fvr_A 105 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRDLAARNILVGENYVA 181 (327)
T ss_dssp ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECGGGCE
T ss_pred EecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCccceEEEcCCCeE
Confidence 99999999999997643 246899999999999999999999999 9999999999999999999
Q ss_pred EEeeecccccCCCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc-CCCCCCCCchhHHHHH
Q 005224 516 KVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVN 594 (707)
Q Consensus 516 kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~ellt-G~~pf~~~~~~~~~~~ 594 (707)
||+|||+++.... ........+++.|+|||++.+..++.++|||||||++|||++ |+.||...... +...
T Consensus 182 kL~Dfg~~~~~~~--------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~-~~~~ 252 (327)
T 1fvr_A 182 KIADFGLSRGQEV--------YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA-ELYE 252 (327)
T ss_dssp EECCTTCEESSCE--------ECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-HHHH
T ss_pred EEcccCcCccccc--------cccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHH-HHHH
Confidence 9999999974321 111233456889999999999999999999999999999998 99999754431 1111
Q ss_pred HHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcC
Q 005224 595 IAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMM 653 (707)
Q Consensus 595 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~ 653 (707)
.+..+.....+..++..+.+++.+|++.+|.+||++.++++.|+.+....
T Consensus 253 ---------~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 302 (327)
T 1fvr_A 253 ---------KLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEER 302 (327)
T ss_dssp ---------HGGGTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSS
T ss_pred ---------HhhcCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhh
Confidence 11122223345566788999999999999999999999999999887654
No 197
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=5.3e-40 Score=348.32 Aligned_cols=269 Identities=26% Similarity=0.430 Sum_probs=214.9
Q ss_pred hcCCCccceEeeeCceEEEEEEe-----CCCcEEEEEEeccCChhhHHHHHHHHHHHHccCCCcceeEEEEEEeCC--eE
Q 005224 374 TNNFNSSTQIGQGGYGKVYKGIL-----PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG--EQ 446 (707)
Q Consensus 374 ~~~~~~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~--~~ 446 (707)
.++|++.+.||+|+||.||+|.+ .+++.||||++........+.+.+|++++++++||||+++++++...+ ..
T Consensus 40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 119 (326)
T 2w1i_A 40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 119 (326)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CC
T ss_pred HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCce
Confidence 45688899999999999999984 368999999998766666678999999999999999999999986544 78
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccC
Q 005224 447 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 526 (707)
Q Consensus 447 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~ 526 (707)
++||||+++++|.+++.... ..+++..++.++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++..
T Consensus 120 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dikp~NIli~~~~~~kL~Dfg~~~~~ 195 (326)
T 2w1i_A 120 KLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVL 195 (326)
T ss_dssp EEEECCCTTCBHHHHHHHST-TSSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEEEETTEEEECCCTTCEEC
T ss_pred EEEEECCCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhCC---EeccCCCcceEEEcCCCcEEEecCcchhhc
Confidence 99999999999999997643 45899999999999999999999998 999999999999999999999999999876
Q ss_pred CCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhc-------
Q 005224 527 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQS------- 599 (707)
Q Consensus 527 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~elltG~~pf~~~~~~~~~~~~~~~~------- 599 (707)
...... ........++..|+|||++.+..++.++|||||||++|||++|..|+........ ......
T Consensus 196 ~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~--~~~~~~~~~~~~~ 269 (326)
T 2w1i_A 196 PQDKEY----YKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFM--RMIGNDKQGQMIV 269 (326)
T ss_dssp CSSCSE----EECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHH--HHHCTTCCTHHHH
T ss_pred cccccc----cccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHH--HhhccccchhhhH
Confidence 532210 1112234567789999999999999999999999999999999998853211100 000000
Q ss_pred -ccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhc
Q 005224 600 -SMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNM 652 (707)
Q Consensus 600 -~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~ 652 (707)
.....+........+..++..+.+++.+||+.+|.+||++.++++.|+.+...
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~~ 323 (326)
T 2w1i_A 270 FHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQ 323 (326)
T ss_dssp HHHHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHhhcCCCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence 00011112223345566778899999999999999999999999999988754
No 198
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=7.5e-40 Score=341.60 Aligned_cols=268 Identities=19% Similarity=0.280 Sum_probs=208.0
Q ss_pred HhcCCCccceEeeeCceEEEEEEe-CCCcEEEEEEeccCChhhHHHHHHHHHHHHccCCCcceeEEEEE-EeCCeEEEEE
Q 005224 373 ATNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYC-DEEGEQMLVY 450 (707)
Q Consensus 373 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~-~~~~~~~lV~ 450 (707)
..++|++.+.||+|+||+||+|.. .+++.||||++..... .+.+.+|+++++.++|++++..+.++ ...+..++||
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~ 84 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVM 84 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEE
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc--chHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEE
Confidence 357899999999999999999996 5789999998765332 23578899999999988877766665 6777889999
Q ss_pred ecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEE---cCCCcEEEeeecccccCC
Q 005224 451 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILL---DHKFTAKVADFGLSRLAP 527 (707)
Q Consensus 451 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl---~~~~~~kl~DFGla~~~~ 527 (707)
||+ +++|.+++... ...+++..++.++.|++.||+|||+.+ |+||||||+|||+ ++++.+||+|||+++...
T Consensus 85 e~~-~~~L~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~ 159 (296)
T 4hgt_A 85 ELL-GPSLEDLFNFC-SRKFSLKTVLLLADQMISRIEYIHSKN---FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYR 159 (296)
T ss_dssp ECC-CCBHHHHHHHT-TSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECCGGGTTCEEECCCTTCEECB
T ss_pred Ecc-CCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeeeeccCCCCeEEEecCccceecc
Confidence 999 99999999754 335999999999999999999999999 9999999999999 789999999999998765
Q ss_pred CCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCch-----hHHHHHHHhhcccc
Q 005224 528 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKN-----IVREVNIAYQSSMM 602 (707)
Q Consensus 528 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~elltG~~pf~~~~~-----~~~~~~~~~~~~~~ 602 (707)
........+........||+.|+|||++.+..++.++|||||||++|||++|+.||..... .............
T Consensus 160 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~- 238 (296)
T 4hgt_A 160 DARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTP- 238 (296)
T ss_dssp CTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSC-
T ss_pred CcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccch-
Confidence 4332221112233456789999999999999999999999999999999999999965322 1111111000000
Q ss_pred hhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCC
Q 005224 603 FSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPE 655 (707)
Q Consensus 603 ~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~ 655 (707)
.......++..+.+++..||+.+|++||++.++++.|+++......
T Consensus 239 -------~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~~~ 284 (296)
T 4hgt_A 239 -------IEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGF 284 (296)
T ss_dssp -------HHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHHTC
T ss_pred -------hhhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhCC
Confidence 0001123357899999999999999999999999999998876543
No 199
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=3.5e-40 Score=354.47 Aligned_cols=297 Identities=22% Similarity=0.265 Sum_probs=200.6
Q ss_pred HHHHHHhcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCe-
Q 005224 368 GEMALATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGE- 445 (707)
Q Consensus 368 ~~l~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~- 445 (707)
.+.....++|++.+.||+|+||+||+|... +|+.||||++.... .....+.+|++.++.++||||+++++++...+.
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~ 94 (360)
T 3e3p_A 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP-RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGER 94 (360)
T ss_dssp HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCT-TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSS
T ss_pred hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc-cccHHHHHHHHHHHhcCCCCcccHHHhhhccccc
Confidence 455667789999999999999999999975 78999999886533 223456778888999999999999999965433
Q ss_pred ------EEEEEecCCCCCHHHHHhh--cCCCCcCHHHHHHHHHHHHHHHHHHH--hCCCCCeEecCCCCCCEEEcC-CCc
Q 005224 446 ------QMLVYEFMSNGTLRDQLSA--KSKEPLGFAMRLSIALGSSRGILYLH--TEADPPVFHRDIKASNILLDH-KFT 514 (707)
Q Consensus 446 ------~~lV~E~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~ia~gL~yLH--~~~~~~ivH~Dlkp~NILl~~-~~~ 514 (707)
.++||||+++ +|.+.+.. .....+++..++.++.|++.||.||| +.+ |+||||||+|||++. ++.
T Consensus 95 ~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~---ivH~Dlkp~NIll~~~~~~ 170 (360)
T 3e3p_A 95 DRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVN---VCHRDIKPHNVLVNEADGT 170 (360)
T ss_dssp CTTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTC---CBCSCCCGGGEEEETTTTE
T ss_pred cccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCC---eecCcCCHHHEEEeCCCCc
Confidence 7899999975 66655543 34456899999999999999999999 888 999999999999996 899
Q ss_pred EEEeeecccccCCCCCCCCccccceecccccCCCccchhhhccC-CCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHH
Q 005224 515 AKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREV 593 (707)
Q Consensus 515 ~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~sDVwS~Gvll~elltG~~pf~~~~~~~~~~ 593 (707)
+||+|||+++...... ......||+.|+|||++.+. .++.++|||||||++|||++|+.||........ .
T Consensus 171 ~kl~Dfg~a~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~-~ 241 (360)
T 3e3p_A 171 LKLCDFGSAKKLSPSE--------PNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQ-L 241 (360)
T ss_dssp EEECCCTTCBCCCTTS--------CCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-H
T ss_pred EEEeeCCCceecCCCC--------CcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHH-H
Confidence 9999999998764322 22345689999999999765 489999999999999999999999976543221 1
Q ss_pred HHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCC
Q 005224 594 NIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEE 673 (707)
Q Consensus 594 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~ 673 (707)
...... ....+.+....+..- ..........+.....+. ........+.+.+||.+||+.||+
T Consensus 242 ~~~~~~----------~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~li~~~L~~dP~ 304 (360)
T 3e3p_A 242 HEIVRV----------LGCPSREVLRKLNPS-HTDVDLYNSKGIPWSNVF------SDHSLKDAKEAYDLLSALLQYLPE 304 (360)
T ss_dssp HHHHHH----------HCCCCHHHHHHHCTT-CCCGGGGCCCCCCHHHHT------TTCCCTTHHHHHHHHHHHTCSSGG
T ss_pred HHHHHH----------cCCCCHHHHHhcccc-hhhccccccccCCccccc------chhhccccHHHHHHHHHHhccCcc
Confidence 111100 000111111110000 000000000111111110 001111223456899999999999
Q ss_pred CCCCCCcCCCCCCCCCCCCCCC
Q 005224 674 TPPSSSSMLKHPYVSSDVSGSN 695 (707)
Q Consensus 674 ~R~sa~e~L~Hp~f~~~~~~~~ 695 (707)
+|||++|+|+||||........
T Consensus 305 ~Rpt~~e~l~hp~f~~~~~~~~ 326 (360)
T 3e3p_A 305 ERMKPYEALCHPYFDELHDPAT 326 (360)
T ss_dssp GSCCHHHHTTSGGGGGGGCTTC
T ss_pred ccCCHHHHhcCccccccCCccc
Confidence 9999999999999987655433
No 200
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=7e-41 Score=374.87 Aligned_cols=259 Identities=24% Similarity=0.358 Sum_probs=205.6
Q ss_pred hcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCC--hhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEE
Q 005224 374 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 450 (707)
Q Consensus 374 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~ 450 (707)
.++|++.+.||+|+||+||+|... +++.||||++.... ......+.+|++++++++||||+++++++.+.+..++||
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 100 (486)
T 3mwu_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVG 100 (486)
T ss_dssp HHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEE
Confidence 467999999999999999999975 78999999986422 223567899999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEc---CCCcEEEeeecccccCC
Q 005224 451 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLD---HKFTAKVADFGLSRLAP 527 (707)
Q Consensus 451 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~---~~~~~kl~DFGla~~~~ 527 (707)
||+++|+|.+.+.... .+++..++.++.||+.||.|||+.+ |+||||||+|||++ .++.+||+|||+++...
T Consensus 101 e~~~~~~L~~~~~~~~--~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~ 175 (486)
T 3mwu_A 101 ELYTGGELFDEIIKRK--RFSEHDAARIIKQVFSGITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ 175 (486)
T ss_dssp CCCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBC
T ss_pred EcCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCchHHEEEecCCCCCCEEEEECCcCeECC
Confidence 9999999999986643 5899999999999999999999999 99999999999995 56689999999998654
Q ss_pred CCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhcc
Q 005224 528 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVID 607 (707)
Q Consensus 528 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 607 (707)
.. .......||+.|+|||++.+ .++.++||||+||++|||++|+.||...... +....
T Consensus 176 ~~--------~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-~~~~~------------ 233 (486)
T 3mwu_A 176 QN--------TKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEY-DILKR------------ 233 (486)
T ss_dssp CC------------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHH------------
T ss_pred CC--------CccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHH------------
Confidence 32 12234568999999999876 5899999999999999999999999654321 11110
Q ss_pred CCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCCCCCCC
Q 005224 608 GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYV 687 (707)
Q Consensus 608 ~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f 687 (707)
+...-.. ...|. ....++.+.+||.+||+.||++|||++|+|+||||
T Consensus 234 ----------------i~~~~~~---~~~~~--------------~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~hp~~ 280 (486)
T 3mwu_A 234 ----------------VETGKYA---FDLPQ--------------WRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWI 280 (486)
T ss_dssp ----------------HHHTCCC---SCSGG--------------GGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHCHHH
T ss_pred ----------------HHhCCCC---CCCcc--------------cCCCCHHHHHHHHHHcCCChhhCcCHHHHhcCHhh
Confidence 0000000 00010 01112334578999999999999999999999999
Q ss_pred CCCCC
Q 005224 688 SSDVS 692 (707)
Q Consensus 688 ~~~~~ 692 (707)
.....
T Consensus 281 ~~~~~ 285 (486)
T 3mwu_A 281 QKYSS 285 (486)
T ss_dssp HHTCC
T ss_pred ccCcc
Confidence 76544
No 201
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=7.8e-41 Score=361.26 Aligned_cols=291 Identities=17% Similarity=0.271 Sum_probs=208.0
Q ss_pred hcCCCccceEeeeCceEEEEEEe-CCCcEEEEEEeccCChhhHHHHHHHHHHHHccC-----------CCcceeEEEEEE
Q 005224 374 TNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLH-----------HRNLVSLVGYCD 441 (707)
Q Consensus 374 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-----------H~nIv~l~~~~~ 441 (707)
.++|++.+.||+|+||+||+|.. .+++.||||++... ....+.+.+|++++++++ |+||+++++++.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~ 96 (373)
T 1q8y_A 18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD-KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFN 96 (373)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEE
T ss_pred CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC-ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhh
Confidence 46899999999999999999996 47899999999753 334567889999999886 899999999997
Q ss_pred eCC----eEEEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhC-CCCCeEecCCCCCCEEEc------
Q 005224 442 EEG----EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTE-ADPPVFHRDIKASNILLD------ 510 (707)
Q Consensus 442 ~~~----~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~-~~~~ivH~Dlkp~NILl~------ 510 (707)
..+ ..++||||+ +++|.+++.......+++..++.++.||+.||+|||++ + |+||||||+|||++
T Consensus 97 ~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~---ivH~Dikp~NIll~~~~~~~ 172 (373)
T 1q8y_A 97 HKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCG---IIHTDIKPENVLMEIVDSPE 172 (373)
T ss_dssp EEETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTC---EECSCCSGGGEEEEEEETTT
T ss_pred ccCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCC---EEecCCChHHeEEeccCCCc
Confidence 654 789999999 88999999876666799999999999999999999998 8 99999999999994
Q ss_pred CCCcEEEeeecccccCCCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchh-
Q 005224 511 HKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNI- 589 (707)
Q Consensus 511 ~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~elltG~~pf~~~~~~- 589 (707)
..+.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||......
T Consensus 173 ~~~~~kl~Dfg~a~~~~~~----------~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~ 242 (373)
T 1q8y_A 173 NLIQIKIADLGNACWYDEH----------YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHS 242 (373)
T ss_dssp TEEEEEECCCTTCEETTBC----------CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC-------
T ss_pred CcceEEEcccccccccCCC----------CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccc
Confidence 4458999999999865321 22346899999999999999999999999999999999999999743321
Q ss_pred ----HHHHHHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccC-------CCCCCCHHHHHHHHHHhhhcCCCCCC
Q 005224 590 ----VREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDE-------TDARPSMSEVMRELESIWNMMPESDT 658 (707)
Q Consensus 590 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~-------p~~RPt~~~v~~~L~~~~~~~~~~~~ 658 (707)
.+...... .. .+..|......- +.....+... ........+++. ...........
T Consensus 243 ~~~~~~~~~~~~------~~----~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 308 (373)
T 1q8y_A 243 YTKDDDHIAQII------EL----LGELPSYLLRNG-KYTRTFFNSRGLLRNISKLKFWPLEDVLT---EKYKFSKDEAK 308 (373)
T ss_dssp --CHHHHHHHHH------HH----HCSCCHHHHHHC-TTHHHHBCC--CBSSCCCCCBCCHHHHHH---HTTCCCHHHHH
T ss_pred cCChHHHHHHHH------Hh----cCCCCHHHHhcc-chhhhhcCCcchhcccccccccchhhhhh---hcccCCcchHH
Confidence 11111000 00 011121111000 0000001000 000111222211 11000111122
Q ss_pred CCCccccCCCCCCCCCCCCCCcCCCCCCCCCCCCC
Q 005224 659 KTPEFINSEHTSKEETPPSSSSMLKHPYVSSDVSG 693 (707)
Q Consensus 659 ~~~dll~~~L~~dP~~R~sa~e~L~Hp~f~~~~~~ 693 (707)
.+.+||.+||+.||++|||++|+|+||||......
T Consensus 309 ~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~~~ 343 (373)
T 1q8y_A 309 EISDFLSPMLQLDPRKRADAGGLVNHPWLKDTLGM 343 (373)
T ss_dssp HHHHHHGGGGCSSTTTCBCHHHHHTCGGGTTCTTC
T ss_pred HHHHHHHHHhccCccccCCHHHHhhChhhhcccCc
Confidence 34579999999999999999999999999876543
No 202
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=5.1e-41 Score=351.70 Aligned_cols=276 Identities=24% Similarity=0.338 Sum_probs=189.5
Q ss_pred HHHhcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCC-hhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEE
Q 005224 371 ALATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 448 (707)
Q Consensus 371 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~l 448 (707)
....++|++.+.||+|+||+||+|... +++.||||++.... ....+++.+|++++++++||||+++++++...+..++
T Consensus 11 ~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 90 (303)
T 2vwi_A 11 SINRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWL 90 (303)
T ss_dssp --CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEE
T ss_pred ccchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEE
Confidence 445678999999999999999999954 78999999986543 2334678899999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhh------cCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecc
Q 005224 449 VYEFMSNGTLRDQLSA------KSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGL 522 (707)
Q Consensus 449 V~E~~~~gsL~~~l~~------~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGl 522 (707)
||||+++++|.+++.. .....+++..++.++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+
T Consensus 91 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~ 167 (303)
T 2vwi_A 91 VMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNG---QIHRDVKAGNILLGEDGSVQIADFGV 167 (303)
T ss_dssp EEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTCCEEECCCHH
T ss_pred EehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCC---CCCCCCChhhEEEcCCCCEEEEeccc
Confidence 9999999999999964 12446899999999999999999999998 99999999999999999999999999
Q ss_pred cccCCCCCCCCccccceecccccCCCccchhhhcc-CCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhccc
Q 005224 523 SRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSM 601 (707)
Q Consensus 523 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDVwS~Gvll~elltG~~pf~~~~~~~~~~~~~~~~~~ 601 (707)
+......... ..........||+.|+|||++.+ ..++.++|||||||++|||++|+.||............
T Consensus 168 ~~~~~~~~~~--~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~------ 239 (303)
T 2vwi_A 168 SAFLATGGDI--TRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLT------ 239 (303)
T ss_dssp HHHCC-----------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHH------
T ss_pred hheeccCCCc--cchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHH------
Confidence 9765432110 01112234568999999999976 57899999999999999999999999754332111000
Q ss_pred chhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcC
Q 005224 602 MFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSM 681 (707)
Q Consensus 602 ~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~ 681 (707)
.+..+...+... . .............+++.+||..||++|||++|+
T Consensus 240 ---------------------------~~~~~~~~~~~~---~----~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l 285 (303)
T 2vwi_A 240 ---------------------------LQNDPPSLETGV---Q----DKEMLKKYGKSFRKMISLCLQKDPEKRPTAAEL 285 (303)
T ss_dssp ---------------------------HTSSCCCTTC------------CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHH
T ss_pred ---------------------------hccCCCcccccc---c----cchhhhhhhHHHHHHHHHHccCChhhCcCHHHH
Confidence 000000000000 0 000111122234468889999999999999999
Q ss_pred CCCCCCCCCC
Q 005224 682 LKHPYVSSDV 691 (707)
Q Consensus 682 L~Hp~f~~~~ 691 (707)
++||||....
T Consensus 286 l~h~~~~~~~ 295 (303)
T 2vwi_A 286 LRHKFFQKAK 295 (303)
T ss_dssp HTSTTC----
T ss_pred hhChhhhcCC
Confidence 9999997644
No 203
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=5.6e-40 Score=377.48 Aligned_cols=252 Identities=27% Similarity=0.393 Sum_probs=205.4
Q ss_pred ceEeeeCceEEEEEEeC---CCcEEEEEEeccCCh--hhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEecCCC
Q 005224 381 TQIGQGGYGKVYKGILP---DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSN 455 (707)
Q Consensus 381 ~~lG~G~~g~Vy~~~~~---~~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E~~~~ 455 (707)
+.||+|+||+||+|.+. +++.||||+++.... ...+++.+|+++|++++||||+++++++.. +..++|||||++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence 47999999999999753 468899999976432 335789999999999999999999999964 568899999999
Q ss_pred CCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCCCcc
Q 005224 456 GTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIV 535 (707)
Q Consensus 456 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 535 (707)
|+|.+++... ..+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++........
T Consensus 454 g~L~~~l~~~--~~l~~~~~~~i~~qi~~~L~yLH~~~---iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~--- 525 (635)
T 4fl3_A 454 GPLNKYLQQN--RHVKDKNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY--- 525 (635)
T ss_dssp EEHHHHHHHC--TTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCTTHHHHTTC-------
T ss_pred CCHHHHHhhC--CCCCHHHHHHHHHHHHHHHHHHHHCC---EeCCCCChHhEEEeCCCCEEEEEcCCccccccCccc---
Confidence 9999999654 35899999999999999999999999 999999999999999999999999999876533211
Q ss_pred ccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHhhcccchhhccCCCCCCC
Q 005224 536 PAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYP 614 (707)
Q Consensus 536 ~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 614 (707)
........+|+.|+|||++.+..++.++|||||||++|||++ |+.||....... .. ..+..+.....+
T Consensus 526 -~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~-~~---------~~i~~~~~~~~p 594 (635)
T 4fl3_A 526 -YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE-VT---------AMLEKGERMGCP 594 (635)
T ss_dssp ----------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH-HH---------HHHHTTCCCCCC
T ss_pred -cccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH-HH---------HHHHcCCCCCCC
Confidence 112233456788999999999999999999999999999998 999997654321 11 112223344466
Q ss_pred hHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhc
Q 005224 615 SECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNM 652 (707)
Q Consensus 615 ~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~ 652 (707)
..++..+.+++..||+.+|++||++.++++.|+.+...
T Consensus 595 ~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~ 632 (635)
T 4fl3_A 595 AGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYD 632 (635)
T ss_dssp TTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHH
Confidence 77888999999999999999999999999999987653
No 204
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.4e-39 Score=342.40 Aligned_cols=259 Identities=19% Similarity=0.263 Sum_probs=203.3
Q ss_pred hcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCChh---hHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEE
Q 005224 374 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ---GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 449 (707)
Q Consensus 374 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~---~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV 449 (707)
.++|++.+.||+|+||.||+|... +++.||||++...... ..+.+.+|+.++++++||||+++++++...+..++|
T Consensus 33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 112 (309)
T 2h34_A 33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVD 112 (309)
T ss_dssp -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEE
Confidence 468999999999999999999975 7899999998754322 246789999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCC
Q 005224 450 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 529 (707)
Q Consensus 450 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~ 529 (707)
|||+++++|.+++.... .+++..++.++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 113 ~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 187 (309)
T 2h34_A 113 MRLINGVDLAAMLRRQG--PLAPPRAVAIVRQIGSALDAAHAAG---ATHRDVKPENILVSADDFAYLVDFGIASATTDE 187 (309)
T ss_dssp EECCCCEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECSCCC-------
T ss_pred EEecCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCc---CCcCCCChHHEEEcCCCCEEEecCccCcccccc
Confidence 99999999999997643 5899999999999999999999999 999999999999999999999999999765432
Q ss_pred CCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCC
Q 005224 530 DIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGN 609 (707)
Q Consensus 530 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 609 (707)
. ........|++.|+|||++.+..++.++||||||+++|||++|+.||...... .......... ..
T Consensus 188 ~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~~~~~~~~------~~ 253 (309)
T 2h34_A 188 K------LTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLS--VMGAHINQAI------PR 253 (309)
T ss_dssp ---------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHH--HHHHHHHSCC------CC
T ss_pred c------cccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHH--HHHHHhccCC------CC
Confidence 2 11223456899999999999999999999999999999999999999764432 1111111100 01
Q ss_pred CCCCChHHHHHHHHHHHHhcccCCCCCC-CHHHHHHHHHHhhh
Q 005224 610 MGSYPSECVEKFIKLALKCCQDETDARP-SMSEVMRELESIWN 651 (707)
Q Consensus 610 ~~~~~~~~~~~l~~l~~~c~~~~p~~RP-t~~~v~~~L~~~~~ 651 (707)
....+..++..+.+++.+||+.+|++|| ++.++++.|+....
T Consensus 254 ~~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~ 296 (309)
T 2h34_A 254 PSTVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALA 296 (309)
T ss_dssp GGGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC
T ss_pred ccccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHH
Confidence 1123345567789999999999999999 99999999987654
No 205
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=8.8e-40 Score=349.61 Aligned_cols=198 Identities=31% Similarity=0.509 Sum_probs=173.0
Q ss_pred cCCCccceEeeeCceEEEEEEe-CCCcEEEEEEeccCCh---hhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEE
Q 005224 375 NNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 450 (707)
Q Consensus 375 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~ 450 (707)
++|+..+.||+|+||+||+|.. .+++.||||++..... ...+.+.+|++++++++||||+++++++...+..++||
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 133 (348)
T 1u5q_A 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 133 (348)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEE
Confidence 4588899999999999999996 5799999999875432 22357889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCC
Q 005224 451 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 530 (707)
Q Consensus 451 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~ 530 (707)
||+. |+|.+++... ...+++..++.++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 134 e~~~-g~l~~~l~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~-- 206 (348)
T 1u5q_A 134 EYCL-GSASDLLEVH-KKPLQEVEIAAVTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMAP-- 206 (348)
T ss_dssp ECCS-EEHHHHHHHH-TSCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSGGGEEEETTTEEEECCCTTCBSSSS--
T ss_pred ecCC-CCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEECCCCCEEEeeccCceecCC--
Confidence 9996 6888888654 346899999999999999999999998 99999999999999999999999999976532
Q ss_pred CCCccccceecccccCCCccchhhhc---cCCCCCchhhHHHHHHHHHHHcCCCCCCCCch
Q 005224 531 IEGIVPAHVSTVVKGTPGYLDPEYFL---THKLTDKSDVYSLGVVFLELLTGMQPISHGKN 588 (707)
Q Consensus 531 ~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~s~~sDVwS~Gvll~elltG~~pf~~~~~ 588 (707)
.....||+.|+|||++. ...++.++|||||||++|||++|+.||.....
T Consensus 207 ---------~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~ 258 (348)
T 1u5q_A 207 ---------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA 258 (348)
T ss_dssp ---------BCCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH
T ss_pred ---------CCcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCh
Confidence 12346899999999985 56789999999999999999999999975443
No 206
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=1.1e-39 Score=338.64 Aligned_cols=252 Identities=24% Similarity=0.392 Sum_probs=199.5
Q ss_pred hcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCC--hhhHHHHHHHHHHHHcc-CCCcceeEEEEEEeCCeEEEE
Q 005224 374 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQMLV 449 (707)
Q Consensus 374 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lV 449 (707)
.++|++.+.||+|+||+||+|... +++.||||++.... .....++.+|+..+..+ +||||+++++++.+.+..++|
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv 89 (289)
T 1x8b_A 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQ 89 (289)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEE
T ss_pred cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEE
Confidence 467999999999999999999976 79999999987532 33456788999999999 999999999999999999999
Q ss_pred EecCCCCCHHHHHhhcC--CCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcC----------------
Q 005224 450 YEFMSNGTLRDQLSAKS--KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDH---------------- 511 (707)
Q Consensus 450 ~E~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~---------------- 511 (707)
|||+++++|.+++.... ...+++..++.++.||++||+|||+++ |+||||||+||+++.
T Consensus 90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~ 166 (289)
T 1x8b_A 90 NEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMS---LVHMDIKPSNIFISRTSIPNAASEEGDEDDW 166 (289)
T ss_dssp EECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEC-----------------
T ss_pred EEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCC---EeecCCCHHHEEEcCCCCCcccccccccccc
Confidence 99999999999997642 256899999999999999999999999 999999999999984
Q ss_pred ---CCcEEEeeecccccCCCCCCCCccccceecccccCCCccchhhhccC-CCCCchhhHHHHHHHHHHHcCCCCCCCCc
Q 005224 512 ---KFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVFLELLTGMQPISHGK 587 (707)
Q Consensus 512 ---~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~sDVwS~Gvll~elltG~~pf~~~~ 587 (707)
...+||+|||.+....... ...||+.|+|||++.+. .++.++|||||||++|||++|..++....
T Consensus 167 ~~~~~~~kl~Dfg~~~~~~~~~-----------~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~ 235 (289)
T 1x8b_A 167 ASNKVMFKIGDLGHVTRISSPQ-----------VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGD 235 (289)
T ss_dssp ---CCCEEECCCTTCEETTCSC-----------CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSH
T ss_pred cCCceEEEEcccccccccCCcc-----------ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchh
Confidence 4489999999998764321 23489999999999875 66689999999999999999987764332
Q ss_pred hhHHHHHHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCC
Q 005224 588 NIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSE 667 (707)
Q Consensus 588 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~ 667 (707)
.. .. +..+.....+. ..++...+++.+|
T Consensus 236 ~~-~~------------~~~~~~~~~~~---------------------------------------~~~~~~~~li~~~ 263 (289)
T 1x8b_A 236 QW-HE------------IRQGRLPRIPQ---------------------------------------VLSQEFTELLKVM 263 (289)
T ss_dssp HH-HH------------HHTTCCCCCSS---------------------------------------CCCHHHHHHHHHH
T ss_pred HH-HH------------HHcCCCCCCCc---------------------------------------ccCHHHHHHHHHH
Confidence 11 00 01111111111 1122234677788
Q ss_pred CCCCCCCCCCCCcCCCCCCCCCCC
Q 005224 668 HTSKEETPPSSSSMLKHPYVSSDV 691 (707)
Q Consensus 668 L~~dP~~R~sa~e~L~Hp~f~~~~ 691 (707)
|..||++|||++|+|+||||.+..
T Consensus 264 l~~dp~~Rps~~~ll~h~~~~~~~ 287 (289)
T 1x8b_A 264 IHPDPERRPSAMALVKHSVLLSAS 287 (289)
T ss_dssp TCSSGGGSCCHHHHHTCTTC----
T ss_pred hCCCcccCCCHHHHhhChHhhhhc
Confidence 889999999999999999998653
No 207
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=8.1e-40 Score=356.44 Aligned_cols=267 Identities=22% Similarity=0.276 Sum_probs=213.3
Q ss_pred hcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCCh-hhHHHHHHHHHHHHccCCCcceeEEEEEEeCC--eEEEE
Q 005224 374 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG--EQMLV 449 (707)
Q Consensus 374 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~--~~~lV 449 (707)
.++|.+.+.||+|+||+||+|... +|+.||||++..... ...+.+.+|++++++++||||+++++++...+ ..++|
T Consensus 8 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv 87 (396)
T 4eut_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI 87 (396)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred CCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEE
Confidence 357889999999999999999976 589999999975432 33567889999999999999999999998765 78999
Q ss_pred EecCCCCCHHHHHhhcC-CCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEE----cCCCcEEEeeecccc
Q 005224 450 YEFMSNGTLRDQLSAKS-KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILL----DHKFTAKVADFGLSR 524 (707)
Q Consensus 450 ~E~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl----~~~~~~kl~DFGla~ 524 (707)
|||+++|+|.+++.... ...+++..++.++.|++.||+|||+.+ |+||||||+|||+ +.++.+||+|||+++
T Consensus 88 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~ 164 (396)
T 4eut_A 88 MEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR 164 (396)
T ss_dssp ECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEEECTTSCEEEEECCGGGCE
T ss_pred EecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCC---EEECCcCHHHEEEeecCCCceeEEEecCCCce
Confidence 99999999999997643 234999999999999999999999999 9999999999999 788889999999998
Q ss_pred cCCCCCCCCccccceecccccCCCccchhhhcc--------CCCCCchhhHHHHHHHHHHHcCCCCCCCCch---hHHHH
Q 005224 525 LAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT--------HKLTDKSDVYSLGVVFLELLTGMQPISHGKN---IVREV 593 (707)
Q Consensus 525 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~s~~sDVwS~Gvll~elltG~~pf~~~~~---~~~~~ 593 (707)
..... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||..... ..+..
T Consensus 165 ~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~ 236 (396)
T 4eut_A 165 ELEDD--------EQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVM 236 (396)
T ss_dssp ECCCG--------GGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHH
T ss_pred EccCC--------CccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHH
Confidence 76432 12234568999999999875 5677899999999999999999999964221 11222
Q ss_pred HHHhhccc---chhh------------ccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 005224 594 NIAYQSSM---MFSV------------IDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 651 (707)
Q Consensus 594 ~~~~~~~~---~~~~------------~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~ 651 (707)
........ ...+ ..+.....+......+.+++.+|++.||++||++.++++.++.+..
T Consensus 237 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~ 309 (396)
T 4eut_A 237 YKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILH 309 (396)
T ss_dssp HHHHHSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHT
T ss_pred HHHhcCCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhh
Confidence 21111110 0000 0011123457888999999999999999999999999999988765
No 208
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=6.7e-40 Score=347.62 Aligned_cols=261 Identities=27% Similarity=0.449 Sum_probs=210.2
Q ss_pred HhcCCCccceEeeeCceEEEEEEe------CCCcEEEEEEeccCC-hhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCe
Q 005224 373 ATNNFNSSTQIGQGGYGKVYKGIL------PDGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGE 445 (707)
Q Consensus 373 ~~~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~ 445 (707)
..++|++.+.||+|+||.||+|.+ .+++.||||++.... .....++.+|+.++++++||||+++++++...+.
T Consensus 28 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 107 (327)
T 2yfx_A 28 PRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLP 107 (327)
T ss_dssp CGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred ChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCC
Confidence 356899999999999999999984 257789999997543 3445678999999999999999999999999999
Q ss_pred EEEEEecCCCCCHHHHHhhcCC-----CCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcC---CCcEEE
Q 005224 446 QMLVYEFMSNGTLRDQLSAKSK-----EPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDH---KFTAKV 517 (707)
Q Consensus 446 ~~lV~E~~~~gsL~~~l~~~~~-----~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~---~~~~kl 517 (707)
.++||||+++++|.+++..... ..+++..++.++.|++.||.|||+.+ |+||||||+|||++. +..+||
T Consensus 108 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~---i~H~dlkp~NIli~~~~~~~~~kl 184 (327)
T 2yfx_A 108 RFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKI 184 (327)
T ss_dssp CEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESCSSTTCCEEE
T ss_pred cEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCC---eecCcCCHhHEEEecCCCcceEEE
Confidence 9999999999999999986532 45899999999999999999999998 999999999999984 456999
Q ss_pred eeecccccCCCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc-CCCCCCCCchhHHHHHHH
Q 005224 518 ADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIA 596 (707)
Q Consensus 518 ~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~ellt-G~~pf~~~~~~~~~~~~~ 596 (707)
+|||+++....... ........|++.|+|||++.+..++.++|||||||++|||++ |+.||...... .....
T Consensus 185 ~Dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~-~~~~~- 257 (327)
T 2yfx_A 185 GDFGMARDIYRASY-----YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ-EVLEF- 257 (327)
T ss_dssp CCCHHHHHHHC-----------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH-HHHHH-
T ss_pred Cccccccccccccc-----cccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHH-HHHHH-
Confidence 99999975432211 112234457889999999999999999999999999999998 99999754432 11111
Q ss_pred hhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 005224 597 YQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 651 (707)
Q Consensus 597 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~ 651 (707)
+..+.....+..++..+.+++..||+.+|.+||++.++++.++.+..
T Consensus 258 --------~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~ 304 (327)
T 2yfx_A 258 --------VTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ 304 (327)
T ss_dssp --------HHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred --------HhcCCCCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhc
Confidence 11222333455667789999999999999999999999999987765
No 209
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=2.2e-39 Score=341.92 Aligned_cols=272 Identities=23% Similarity=0.314 Sum_probs=210.8
Q ss_pred HHhcCCCccceEeeeCceEEEEEEe-CCCcEEEEEEeccCChhhHHHHHHHHHHHHccCCCcceeEEEEEEe----CCeE
Q 005224 372 LATNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE----EGEQ 446 (707)
Q Consensus 372 ~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~----~~~~ 446 (707)
...++|++.+.||+|+||.||+|.. .+++.||||++........+.+.+|+++++.++||||+++++++.. ....
T Consensus 26 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 105 (317)
T 2buj_A 26 IDNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEA 105 (317)
T ss_dssp ETTEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEE
T ss_pred ECCeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCcee
Confidence 3456899999999999999999997 5799999999877666667789999999999999999999999863 3478
Q ss_pred EEEEecCCCCCHHHHHhhc--CCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccc
Q 005224 447 MLVYEFMSNGTLRDQLSAK--SKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSR 524 (707)
Q Consensus 447 ~lV~E~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~ 524 (707)
++||||+++|+|.+++... ....+++..++.++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||++.
T Consensus 106 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~dlkp~NIl~~~~~~~kl~dfg~~~ 182 (317)
T 2buj_A 106 WLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKG---YAHRDLKPTNILLGDEGQPVLMDLGSMN 182 (317)
T ss_dssp EEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTSCEEECCCSSCE
T ss_pred EEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEcCCCCEEEEecCcch
Confidence 9999999999999999762 3456999999999999999999999998 9999999999999999999999999987
Q ss_pred cCCCCCCCCc--cccceecccccCCCccchhhhccCC---CCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhc
Q 005224 525 LAPVPDIEGI--VPAHVSTVVKGTPGYLDPEYFLTHK---LTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQS 599 (707)
Q Consensus 525 ~~~~~~~~~~--~~~~~~~~~~gt~~y~aPE~~~~~~---~s~~sDVwS~Gvll~elltG~~pf~~~~~~~~~~~~~~~~ 599 (707)
.......... ..........||+.|+|||++.+.. ++.++|||||||++|||++|+.||............
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~---- 258 (317)
T 2buj_A 183 QACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVAL---- 258 (317)
T ss_dssp ESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHH----
T ss_pred hcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhH----
Confidence 6432110000 0000112345799999999997654 788999999999999999999999421100000000
Q ss_pred ccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCC
Q 005224 600 SMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMP 654 (707)
Q Consensus 600 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~ 654 (707)
..........+..++..+.+++.+||+.+|.+||++.++++.|+.+....+
T Consensus 259 ----~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~~~ 309 (317)
T 2buj_A 259 ----AVQNQLSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPPAP 309 (317)
T ss_dssp ----HHHCC--CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCCCCC
T ss_pred ----HhhccCCCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCCCCC
Confidence 001111112234556789999999999999999999999999998765443
No 210
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=2.5e-39 Score=344.42 Aligned_cols=268 Identities=24% Similarity=0.395 Sum_probs=201.1
Q ss_pred HhcCCCccceEeeeCceEEEEEEeCCCcEEEEEEeccCChhhHHHHHHHHHH--HHccCCCcceeEEEEEEe-----CCe
Q 005224 373 ATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQF--LSRLHHRNLVSLVGYCDE-----EGE 445 (707)
Q Consensus 373 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~--l~~l~H~nIv~l~~~~~~-----~~~ 445 (707)
..++|++.+.||+|+||+||+|+. +++.||||++.... ...+..|.++ +..++|+||+++++.+.. ...
T Consensus 11 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 86 (336)
T 3g2f_A 11 DLDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFAN---RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRME 86 (336)
T ss_dssp CTTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEE
T ss_pred ChHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCcchhhheecccccccCCCce
Confidence 346889999999999999999987 68999999986532 3344445444 445899999999986642 235
Q ss_pred EEEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhC---------CCCCeEecCCCCCCEEEcCCCcEE
Q 005224 446 QMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTE---------ADPPVFHRDIKASNILLDHKFTAK 516 (707)
Q Consensus 446 ~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~---------~~~~ivH~Dlkp~NILl~~~~~~k 516 (707)
.++||||+++|+|.+++.... .++..++.++.||++||+|||+. + |+||||||+|||++.++.+|
T Consensus 87 ~~lv~e~~~~g~L~~~l~~~~---~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~---ivH~Dikp~Nill~~~~~~k 160 (336)
T 3g2f_A 87 YLLVMEYYPNGSLXKYLSLHT---SDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPA---ISHRDLNSRNVLVKNDGTCV 160 (336)
T ss_dssp EEEEECCCTTCBHHHHHHHCC---BCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCC---EECSSCSGGGEEECTTSCEE
T ss_pred EEEEEecCCCCcHHHHHhhcc---cchhHHHHHHHHHHHHHHHHHhhhccccccccc---eeecccccceEEEcCCCcEE
Confidence 789999999999999996543 58899999999999999999998 7 99999999999999999999
Q ss_pred EeeecccccCCCCCCCCc-cccceecccccCCCccchhhhcc-------CCCCCchhhHHHHHHHHHHHcCCCCCCCCch
Q 005224 517 VADFGLSRLAPVPDIEGI-VPAHVSTVVKGTPGYLDPEYFLT-------HKLTDKSDVYSLGVVFLELLTGMQPISHGKN 588 (707)
Q Consensus 517 l~DFGla~~~~~~~~~~~-~~~~~~~~~~gt~~y~aPE~~~~-------~~~s~~sDVwS~Gvll~elltG~~pf~~~~~ 588 (707)
|+|||+++.......... ..........||+.|+|||++.+ ..++.++|||||||++|||++|..||.....
T Consensus 161 L~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~ 240 (336)
T 3g2f_A 161 ISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGES 240 (336)
T ss_dssp ECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSC
T ss_pred EeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccc
Confidence 999999987653221110 01122334569999999999987 4566789999999999999999887754322
Q ss_pred h----------------HHHHHHHhhcccchhhccCCCC---CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 005224 589 I----------------VREVNIAYQSSMMFSVIDGNMG---SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 649 (707)
Q Consensus 589 ~----------------~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~ 649 (707)
. ............ ...... .....++..+.+++.+||+.+|.+|||+.++++.|+.+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~l 316 (336)
T 3g2f_A 241 VPEYQMAFQTEVGNHPTFEDMQVLVSREK----QRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAEL 316 (336)
T ss_dssp CCCCCCTTHHHHCSSCCHHHHHHHHTTSC----CCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHH
T ss_pred hhHHHHhhhcccCCCchHHHHHhhhcccc----cCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHH
Confidence 1 000010000000 001111 12335778899999999999999999999999999998
Q ss_pred hhcCC
Q 005224 650 WNMMP 654 (707)
Q Consensus 650 ~~~~~ 654 (707)
...+.
T Consensus 317 l~~~~ 321 (336)
T 3g2f_A 317 MMIWE 321 (336)
T ss_dssp HHCCC
T ss_pred HHHHH
Confidence 76554
No 211
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=2.1e-39 Score=352.18 Aligned_cols=250 Identities=23% Similarity=0.331 Sum_probs=200.2
Q ss_pred cCCCccceEeeeCceEEEEEEeCCCcEEEEEEeccCC--hhhHHHHHHHHHHHHccC--CCcceeEEEEEEeCCeEEEEE
Q 005224 375 NNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLH--HRNLVSLVGYCDEEGEQMLVY 450 (707)
Q Consensus 375 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~--H~nIv~l~~~~~~~~~~~lV~ 450 (707)
.+|++.+.||+|+||+||+|...+++.||||++.... ....+.+.+|++++++++ |+||+++++++...+..++||
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 135 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 135 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEE
Confidence 4688999999999999999998889999999986543 334567899999999996 599999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCC
Q 005224 451 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 530 (707)
Q Consensus 451 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~ 530 (707)
| +.+++|.+++.... .+++..++.++.||+.||.|||+.+ |+||||||+|||++ ++.+||+|||+++......
T Consensus 136 E-~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~lH~~~---ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~ 208 (390)
T 2zmd_A 136 E-CGNIDLNSWLKKKK--SIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDT 208 (390)
T ss_dssp E-CCSEEHHHHHHHCS--SCCHHHHHHHHHHHHHHHHHHHTTT---CCCCCCCGGGEEES-SSCEEECCCSSSCCC----
T ss_pred e-cCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHEEEE-CCeEEEEecCccccccCCC
Confidence 9 55889999997653 5889999999999999999999998 99999999999995 5899999999998764321
Q ss_pred CCCccccceecccccCCCccchhhhcc-----------CCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhc
Q 005224 531 IEGIVPAHVSTVVKGTPGYLDPEYFLT-----------HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQS 599 (707)
Q Consensus 531 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~s~~sDVwS~Gvll~elltG~~pf~~~~~~~~~~~~~~~~ 599 (707)
. ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||....+........
T Consensus 209 ~-----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~~~--- 280 (390)
T 2zmd_A 209 T-----SVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAI--- 280 (390)
T ss_dssp ----------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHH---
T ss_pred c-----cccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHHHHHHH---
Confidence 1 112234579999999999975 468889999999999999999999997654433322221
Q ss_pred ccchhhccCC-CCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005224 600 SMMFSVIDGN-MGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRE 645 (707)
Q Consensus 600 ~~~~~~~~~~-~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~ 645 (707)
+++. ...++...+..+.+++.+||+.+|.+||++.++++.
T Consensus 281 ------~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h 321 (390)
T 2zmd_A 281 ------IDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 321 (390)
T ss_dssp ------HCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ------hCccccCCCCccchHHHHHHHHHHcccChhhCCCHHHHhhC
Confidence 1111 122333445678899999999999999999999764
No 212
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=4.2e-40 Score=348.44 Aligned_cols=199 Identities=28% Similarity=0.450 Sum_probs=168.3
Q ss_pred hcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCCh--------hhHHHHHHHHHHHHccCCCcceeEEEEEEeCC
Q 005224 374 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--------QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG 444 (707)
Q Consensus 374 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~--------~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~ 444 (707)
.++|.+.+.||+|+||.||+|... +++.||||++..... .....+.+|++++++++||||+++++++...+
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 88 (322)
T 2ycf_A 9 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED 88 (322)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS
T ss_pred hhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc
Confidence 467999999999999999999975 689999999865321 11235789999999999999999999987654
Q ss_pred eEEEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCc---EEEeeec
Q 005224 445 EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFT---AKVADFG 521 (707)
Q Consensus 445 ~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~---~kl~DFG 521 (707)
.++||||+++++|.+++.. ...+++..++.++.||+.||+|||+.+ |+||||||+|||++.++. +||+|||
T Consensus 89 -~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~NIl~~~~~~~~~~kl~Dfg 162 (322)
T 2ycf_A 89 -YYIVLELMEGGELFDKVVG--NKRLKEATCKLYFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFG 162 (322)
T ss_dssp -EEEEEECCTTEETHHHHST--TCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESSSSSSCCEEECCCT
T ss_pred -eEEEEecCCCCcHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEEecCCCCCeEEEccCc
Confidence 8999999999999999854 346899999999999999999999999 999999999999987664 9999999
Q ss_pred ccccCCCCCCCCccccceecccccCCCccchhhhc---cCCCCCchhhHHHHHHHHHHHcCCCCCCCC
Q 005224 522 LSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFL---THKLTDKSDVYSLGVVFLELLTGMQPISHG 586 (707)
Q Consensus 522 la~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~s~~sDVwS~Gvll~elltG~~pf~~~ 586 (707)
+++..... .......||+.|+|||++. ...++.++|||||||++|||++|+.||...
T Consensus 163 ~~~~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 222 (322)
T 2ycf_A 163 HSKILGET--------SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEH 222 (322)
T ss_dssp TCEECCCC--------HHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCST
T ss_pred cceecccc--------cccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCccc
Confidence 99865421 1223456899999999974 467899999999999999999999999643
No 213
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=3e-39 Score=348.08 Aligned_cols=269 Identities=16% Similarity=0.197 Sum_probs=213.8
Q ss_pred HHhcCCCccceEeeeCceEEEEEE------eCCCcEEEEEEeccCChhhHHHHHHHHHHHHccC---CCcceeEEEEEEe
Q 005224 372 LATNNFNSSTQIGQGGYGKVYKGI------LPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLH---HRNLVSLVGYCDE 442 (707)
Q Consensus 372 ~~~~~~~~~~~lG~G~~g~Vy~~~------~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~---H~nIv~l~~~~~~ 442 (707)
...++|.+.+.||+|+||+||+|. ..+++.||||++.... ..++..|+++++.++ |+||+++++++..
T Consensus 62 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~ 138 (365)
T 3e7e_A 62 LGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN---PWEFYIGTQLMERLKPSMQHMFMKFYSAHLF 138 (365)
T ss_dssp CSSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCC---HHHHHHHHHHHHHSCGGGGGGBCCEEEEEEC
T ss_pred ECCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCC---hhHHHHHHHHHHHhhhhhhhhhhhhheeeec
Confidence 345778999999999999999994 3468999999997643 456778888888886 9999999999999
Q ss_pred CCeEEEEEecCCCCCHHHHHhhc---CCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcC--------
Q 005224 443 EGEQMLVYEFMSNGTLRDQLSAK---SKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDH-------- 511 (707)
Q Consensus 443 ~~~~~lV~E~~~~gsL~~~l~~~---~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~-------- 511 (707)
.+..++||||+++|+|.+++... ....+++..++.++.||++||+|||+.+ |+||||||+|||++.
T Consensus 139 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~---ivHrDiKp~NIll~~~~~~~~~~ 215 (365)
T 3e7e_A 139 QNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCE---IIHGDIKPDNFILGNGFLEQDDE 215 (365)
T ss_dssp SSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCSGGGEEECGGGTCC---
T ss_pred CCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCC---eecCCCCHHHEEecccccCcccc
Confidence 99999999999999999999752 3456999999999999999999999998 999999999999998
Q ss_pred ---CCcEEEeeecccccCCCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCch
Q 005224 512 ---KFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKN 588 (707)
Q Consensus 512 ---~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~elltG~~pf~~~~~ 588 (707)
++.+||+|||+|+...... .........||+.|+|||++.+..++.++|||||||++|||++|+.||.....
T Consensus 216 ~~~~~~~kl~DFG~a~~~~~~~-----~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~ 290 (365)
T 3e7e_A 216 DDLSAGLALIDLGQSIDMKLFP-----KGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEG 290 (365)
T ss_dssp ---CTTEEECCCTTCEEGGGSC-----TTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEET
T ss_pred ccccCCEEEeeCchhhhhhccC-----CCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCC
Confidence 8999999999997543211 12334556799999999999999999999999999999999999999954322
Q ss_pred hHHHHHHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCC-CCHHHHHHHHHHhhhcCCCCCCCCCccccCC
Q 005224 589 IVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDAR-PSMSEVMRELESIWNMMPESDTKTPEFINSE 667 (707)
Q Consensus 589 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~R-Pt~~~v~~~L~~~~~~~~~~~~~~~dll~~~ 667 (707)
. . ..+.......+ ..+.+.+++..|++.+|.+| |++.++.+.|+.+..... ....+++.++
T Consensus 291 ~------------~-~~~~~~~~~~~--~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~~~~---~~~~~~l~~~ 352 (365)
T 3e7e_A 291 G------------E-CKPEGLFRRLP--HLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQHY---TNKIRALRNR 352 (365)
T ss_dssp T------------E-EEECSCCTTCS--SHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHHHHT---TTTHHHHHHH
T ss_pred C------------c-eeechhccccC--cHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHHHhh---hhchHHHHHH
Confidence 0 0 00111122222 24567788999999999988 688888888888776533 2334555554
Q ss_pred CC
Q 005224 668 HT 669 (707)
Q Consensus 668 L~ 669 (707)
|.
T Consensus 353 l~ 354 (365)
T 3e7e_A 353 LI 354 (365)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 214
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=5.2e-39 Score=335.18 Aligned_cols=200 Identities=27% Similarity=0.391 Sum_probs=171.4
Q ss_pred CCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEecCC
Q 005224 376 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMS 454 (707)
Q Consensus 376 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E~~~ 454 (707)
+|.....||+|+||+||+|... +++.||||.+........+.+.+|+.+++.++||||+++++++...+..++||||++
T Consensus 23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 102 (295)
T 2clq_A 23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVP 102 (295)
T ss_dssp TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCC
Confidence 3555669999999999999964 789999999987665556789999999999999999999999999999999999999
Q ss_pred CCCHHHHHhhcC-CCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcC-CCcEEEeeecccccCCCCCCC
Q 005224 455 NGTLRDQLSAKS-KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDH-KFTAKVADFGLSRLAPVPDIE 532 (707)
Q Consensus 455 ~gsL~~~l~~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~-~~~~kl~DFGla~~~~~~~~~ 532 (707)
+++|.+++.... ...+++..++.++.|++.||+|||+.+ |+||||||+||+++. ++.+||+|||+++......
T Consensus 103 ~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~-- 177 (295)
T 2clq_A 103 GGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQ---IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGIN-- 177 (295)
T ss_dssp EEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETTTCCEEECCTTTCEESCC----
T ss_pred CCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCC---EEccCCChhhEEEECCCCCEEEeecccccccCCCC--
Confidence 999999997653 345779999999999999999999998 999999999999987 8999999999998654321
Q ss_pred CccccceecccccCCCccchhhhccCC--CCCchhhHHHHHHHHHHHcCCCCCCC
Q 005224 533 GIVPAHVSTVVKGTPGYLDPEYFLTHK--LTDKSDVYSLGVVFLELLTGMQPISH 585 (707)
Q Consensus 533 ~~~~~~~~~~~~gt~~y~aPE~~~~~~--~s~~sDVwS~Gvll~elltG~~pf~~ 585 (707)
.......|++.|+|||++.+.. ++.++|||||||++|||++|+.||..
T Consensus 178 -----~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 227 (295)
T 2clq_A 178 -----PCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYE 227 (295)
T ss_dssp --------CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGG
T ss_pred -----CcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccC
Confidence 1123456899999999997643 88999999999999999999999964
No 215
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=1.9e-39 Score=336.84 Aligned_cols=200 Identities=29% Similarity=0.456 Sum_probs=176.6
Q ss_pred hcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCCh---hhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEE
Q 005224 374 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 449 (707)
Q Consensus 374 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV 449 (707)
.++|++.+.||+|+||.||+|... +++.||||++..... ...+.+.+|+++++.++||||+++++++.+.+..++|
T Consensus 13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 92 (284)
T 2vgo_A 13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLM 92 (284)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEE
Confidence 357889999999999999999975 688999999865321 2246789999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCC
Q 005224 450 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 529 (707)
Q Consensus 450 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~ 529 (707)
|||+++++|.+++.... .+++..++.++.|+++||.|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 93 ~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~ 167 (284)
T 2vgo_A 93 LEFAPRGELYKELQKHG--RFDEQRSATFMEELADALHYCHERK---VIHRDIKPENLLMGYKGELKIADFGWSVHAPSL 167 (284)
T ss_dssp ECCCTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCSGGGEEECTTCCEEECCCTTCEECSSS
T ss_pred EEeCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCHHHEEEcCCCCEEEecccccccCccc
Confidence 99999999999997653 4899999999999999999999998 999999999999999999999999998765321
Q ss_pred CCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCc
Q 005224 530 DIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 587 (707)
Q Consensus 530 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~elltG~~pf~~~~ 587 (707)
......|++.|+|||++.+..++.++||||||+++|||++|+.||....
T Consensus 168 ---------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~ 216 (284)
T 2vgo_A 168 ---------RRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPS 216 (284)
T ss_dssp ---------CBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSS
T ss_pred ---------ccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCC
Confidence 1234568999999999999999999999999999999999999997544
No 216
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=6.1e-40 Score=349.11 Aligned_cols=199 Identities=24% Similarity=0.378 Sum_probs=174.5
Q ss_pred hcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCChh--------hHHHHHHHHHHHHccCCCcceeEEEEEEeCC
Q 005224 374 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ--------GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG 444 (707)
Q Consensus 374 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~--------~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~ 444 (707)
.++|++.+.||+|+||+||+|... +++.||||++...... ..+.+.+|++++++++||||+++++++.+.+
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~ 102 (335)
T 3dls_A 23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQG 102 (335)
T ss_dssp HHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSS
T ss_pred ccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCC
Confidence 568999999999999999999964 7899999998764321 2235778999999999999999999999999
Q ss_pred eEEEEEecCCCC-CHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeeccc
Q 005224 445 EQMLVYEFMSNG-TLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLS 523 (707)
Q Consensus 445 ~~~lV~E~~~~g-sL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla 523 (707)
..++||||+.+| +|.+++... ..+++..++.++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||++
T Consensus 103 ~~~lv~e~~~~g~~l~~~~~~~--~~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~Dfg~a 177 (335)
T 3dls_A 103 FFQLVMEKHGSGLDLFAFIDRH--PRLDEPLASYIFRQLVSAVGYLRLKD---IIHRDIKDENIVIAEDFTIKLIDFGSA 177 (335)
T ss_dssp EEEEEEECCTTSCBHHHHHHTC--CCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTSCEEECCCTTC
T ss_pred EEEEEEEeCCCCccHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCC---eEEeccCHHHEEEcCCCcEEEeecccc
Confidence 999999999777 999999654 35999999999999999999999999 999999999999999999999999999
Q ss_pred ccCCCCCCCCccccceecccccCCCccchhhhccCCC-CCchhhHHHHHHHHHHHcCCCCCCC
Q 005224 524 RLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKL-TDKSDVYSLGVVFLELLTGMQPISH 585 (707)
Q Consensus 524 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-s~~sDVwS~Gvll~elltG~~pf~~ 585 (707)
+...... ......||+.|+|||++.+..+ +.++|||||||++|||++|+.||..
T Consensus 178 ~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~ 232 (335)
T 3dls_A 178 AYLERGK--------LFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCE 232 (335)
T ss_dssp EECCTTC--------CBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSS
T ss_pred eECCCCC--------ceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhh
Confidence 8764322 2234568999999999998876 7889999999999999999999964
No 217
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=1.1e-39 Score=337.71 Aligned_cols=207 Identities=27% Similarity=0.435 Sum_probs=174.0
Q ss_pred hcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCC--hhhHHHHHHHHHHHHccCCCcceeEEEEEEe--CCeEEE
Q 005224 374 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE--EGEQML 448 (707)
Q Consensus 374 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~--~~~~~l 448 (707)
.++|++.+.||+|+||+||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++.. .+..++
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 84 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI 84 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence 467899999999999999999975 78999999987543 2345678999999999999999999998854 568999
Q ss_pred EEecCCCCCHHHHHhhc--CCCCcCHHHHHHHHHHHHHHHHHHHhCC--CCCeEecCCCCCCEEEcCCCcEEEeeecccc
Q 005224 449 VYEFMSNGTLRDQLSAK--SKEPLGFAMRLSIALGSSRGILYLHTEA--DPPVFHRDIKASNILLDHKFTAKVADFGLSR 524 (707)
Q Consensus 449 V~E~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~--~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~ 524 (707)
||||+++++|.+++... ....+++..++.++.|++.||+|||+.+ ..+|+||||||+||+++.++.+||+|||+++
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~ 164 (279)
T 2w5a_A 85 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR 164 (279)
T ss_dssp EEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCCHHH
T ss_pred EEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCchhe
Confidence 99999999999999753 3456999999999999999999999876 2349999999999999999999999999998
Q ss_pred cCCCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCc
Q 005224 525 LAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 587 (707)
Q Consensus 525 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~elltG~~pf~~~~ 587 (707)
...... .......|++.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 165 ~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~ 220 (279)
T 2w5a_A 165 ILNHDT-------SFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFS 220 (279)
T ss_dssp HC---C-------HHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred eecccc-------ccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccC
Confidence 654221 11234568999999999999999999999999999999999999997543
No 218
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=3.5e-39 Score=338.16 Aligned_cols=201 Identities=29% Similarity=0.441 Sum_probs=177.7
Q ss_pred hcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCC-hhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEe
Q 005224 374 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 451 (707)
Q Consensus 374 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E 451 (707)
.+.|+..+.||+|+||.||+|... +++.||||++.... ....+.+.+|+.+++.++||||+++++++...+..++|||
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 100 (303)
T 3a7i_A 21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIME 100 (303)
T ss_dssp GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEE
Confidence 356889999999999999999964 78999999987543 2345789999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCC
Q 005224 452 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 531 (707)
Q Consensus 452 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 531 (707)
|+++++|.+++.. ..+++..++.++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 101 ~~~~~~L~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~- 173 (303)
T 3a7i_A 101 YLGGGSALDLLEP---GPLDETQIATILREILKGLDYLHSEK---KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ- 173 (303)
T ss_dssp CCTTEEHHHHHTT---SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECBTTB-
T ss_pred eCCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCChheEEECCCCCEEEeecccceecCccc-
Confidence 9999999999954 35899999999999999999999999 9999999999999999999999999997654321
Q ss_pred CCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCc
Q 005224 532 EGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 587 (707)
Q Consensus 532 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~elltG~~pf~~~~ 587 (707)
.......|++.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 174 ------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~ 223 (303)
T 3a7i_A 174 ------IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELH 223 (303)
T ss_dssp ------CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC
T ss_pred ------cccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcC
Confidence 12234568999999999999999999999999999999999999997543
No 219
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=4e-41 Score=363.63 Aligned_cols=260 Identities=10% Similarity=-0.008 Sum_probs=183.4
Q ss_pred hcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCCh---hhHHHHHHHHHHHHcc--CCCcceeEE-------EEE
Q 005224 374 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRL--HHRNLVSLV-------GYC 440 (707)
Q Consensus 374 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l--~H~nIv~l~-------~~~ 440 (707)
..+|...+.||+|+||+||+|.+. +|+.||||++..... ...+.+.+|+++++.+ +||||++++ +++
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~ 140 (371)
T 3q60_A 61 ERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAV 140 (371)
T ss_dssp EEEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEE
T ss_pred ceeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhe
Confidence 345888999999999999999975 789999999987543 2345677885544444 699988755 555
Q ss_pred EeCC-----------------eEEEEEecCCCCCHHHHHhhcCCCCcCHHHH------HHHHHHHHHHHHHHHhCCCCCe
Q 005224 441 DEEG-----------------EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMR------LSIALGSSRGILYLHTEADPPV 497 (707)
Q Consensus 441 ~~~~-----------------~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~------~~i~~~ia~gL~yLH~~~~~~i 497 (707)
...+ ..++||||++ |+|.+++..... .+.+..+ +.++.||++||+|||+++ |
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~-~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~---i 215 (371)
T 3q60_A 141 AVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDF-VYVFRGDEGILALHILTAQLIRLAANLQSKG---L 215 (371)
T ss_dssp EETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHH-SCCCCHHHHHHHHHHHHHHHHHHHHHHHHTT---E
T ss_pred ecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhcc-ccchhhhhhhhhHHHHHHHHHHHHHHHHHCC---C
Confidence 4432 3799999998 899999976422 2345555 788899999999999999 9
Q ss_pred EecCCCCCCEEEcCCCcEEEeeecccccCCCCCCCCccccceecccccCCCccchhhhcc--CCCCCchhhHHHHHHHHH
Q 005224 498 FHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT--HKLTDKSDVYSLGVVFLE 575 (707)
Q Consensus 498 vH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~s~~sDVwS~Gvll~e 575 (707)
+||||||+|||++.++.+||+|||+|+.... ......+|+.|+|||++.+ ..++.++|||||||++||
T Consensus 216 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~----------~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~e 285 (371)
T 3q60_A 216 VHGHFTPDNLFIMPDGRLMLGDVSALWKVGT----------RGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYR 285 (371)
T ss_dssp EETTCSGGGEEECTTSCEEECCGGGEEETTC----------EEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHH
T ss_pred ccCcCCHHHEEECCCCCEEEEecceeeecCC----------CccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHH
Confidence 9999999999999999999999999986531 1224456799999999987 789999999999999999
Q ss_pred HHcCCCCCCCCchhHHHHHHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCC
Q 005224 576 LLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPE 655 (707)
Q Consensus 576 lltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~ 655 (707)
|++|+.||........ .......... ....++.+ ...+.
T Consensus 286 lltg~~Pf~~~~~~~~--------~~~~~~~~~~----------------------~~~~~~~~-----------~~~~~ 324 (371)
T 3q60_A 286 VWCLFLPFGLVTPGIK--------GSWKRPSLRV----------------------PGTDSLAF-----------GSCTP 324 (371)
T ss_dssp HHHSSCSTTBCCTTCT--------TCCCBCCTTS----------------------CCCCSCCC-----------TTSSC
T ss_pred HHhCCCCCCCcCcccc--------cchhhhhhhh----------------------ccccccch-----------hhccC
Confidence 9999999975422100 0000000000 00000000 00012
Q ss_pred CCCCCCccccCCCCCCCCCCCCCCcCCCCCCCCC
Q 005224 656 SDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSS 689 (707)
Q Consensus 656 ~~~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f~~ 689 (707)
.++...+||.+||..||++|||++|+|+||||..
T Consensus 325 ~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~ 358 (371)
T 3q60_A 325 LPDFVKTLIGRFLNFDRRRRLLPLEAMETPEFLQ 358 (371)
T ss_dssp CCHHHHHHHHHHTCSSTTTCCCHHHHTTSHHHHH
T ss_pred CCHHHHHHHHHHcCCChhhCCCHHHHhcCHHHHH
Confidence 2233446888899999999999999999999964
No 220
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=3.1e-39 Score=333.64 Aligned_cols=200 Identities=28% Similarity=0.414 Sum_probs=168.5
Q ss_pred hcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCCh---hhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEE
Q 005224 374 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 449 (707)
Q Consensus 374 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV 449 (707)
.++|.+.+.||+|+||.||+|... +|+.||||++..... ...+.+.+|+++++.++||||+++++++...+..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (276)
T 2h6d_A 10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMV 89 (276)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEE
Confidence 467899999999999999999976 799999999865321 2345788999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCC
Q 005224 450 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 529 (707)
Q Consensus 450 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~ 529 (707)
|||+++++|.+++.... .+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 90 ~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~ 164 (276)
T 2h6d_A 90 MEYVSGGELFDYICKHG--RVEEMEARRLFQQILSAVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG 164 (276)
T ss_dssp EECCCSCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHHC---SSCCCCCGGGEEECTTSCEEECCCCGGGCCCC-
T ss_pred EeccCCCcHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCChhhEEECCCCCEEEeecccccccCCC
Confidence 99999999999997653 4899999999999999999999999 999999999999999999999999999865432
Q ss_pred CCCCccccceecccccCCCccchhhhccCCC-CCchhhHHHHHHHHHHHcCCCCCCCC
Q 005224 530 DIEGIVPAHVSTVVKGTPGYLDPEYFLTHKL-TDKSDVYSLGVVFLELLTGMQPISHG 586 (707)
Q Consensus 530 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-s~~sDVwS~Gvll~elltG~~pf~~~ 586 (707)
. ......|++.|+|||++.+..+ +.++||||||+++|||++|+.||...
T Consensus 165 ~--------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~ 214 (276)
T 2h6d_A 165 E--------FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDE 214 (276)
T ss_dssp --------------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred c--------ceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCC
Confidence 1 1234468999999999988765 57999999999999999999999654
No 221
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=7.4e-39 Score=341.50 Aligned_cols=266 Identities=23% Similarity=0.357 Sum_probs=210.2
Q ss_pred HHHHhcCCCccceEeeeCceEEEEEEeCCCcEEEEEEeccCChhhHHHHHHHHHHHHc--cCCCcceeEEEEEEeCC---
Q 005224 370 MALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSR--LHHRNLVSLVGYCDEEG--- 444 (707)
Q Consensus 370 l~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~--l~H~nIv~l~~~~~~~~--- 444 (707)
.....++|++.+.||+|+||+||+|.. +++.||||++... ..+.+.+|+++++. ++||||+++++++....
T Consensus 37 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~ 112 (342)
T 1b6c_B 37 QRTIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTW 112 (342)
T ss_dssp HHHHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSC
T ss_pred cccccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCcc
Confidence 344567899999999999999999998 5899999998643 34577889999887 78999999999998776
Q ss_pred -eEEEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHH--------hCCCCCeEecCCCCCCEEEcCCCcE
Q 005224 445 -EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLH--------TEADPPVFHRDIKASNILLDHKFTA 515 (707)
Q Consensus 445 -~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH--------~~~~~~ivH~Dlkp~NILl~~~~~~ 515 (707)
..++||||+++|+|.+++... .+++..++.++.|++.||+||| +.+ |+||||||+|||++.++.+
T Consensus 113 ~~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~---ivH~Dlkp~NIll~~~~~~ 186 (342)
T 1b6c_B 113 TQLWLVSDYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA---IAHRDLKSKNILVKKNGTC 186 (342)
T ss_dssp CCEEEEECCCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCE---EECSCCSGGGEEECTTSCE
T ss_pred ceeEEEEeecCCCcHHHHHhcc---CccHHHHHHHHHHHHHHHHHHHHHHhhhcccCC---eeeCCCCHHHEEECCCCCE
Confidence 789999999999999999753 4899999999999999999999 677 9999999999999999999
Q ss_pred EEeeecccccCCCCCCCCccccceecccccCCCccchhhhccCC------CCCchhhHHHHHHHHHHHcC----------
Q 005224 516 KVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHK------LTDKSDVYSLGVVFLELLTG---------- 579 (707)
Q Consensus 516 kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~------~s~~sDVwS~Gvll~elltG---------- 579 (707)
||+|||+++........ .........||+.|+|||++.+.. ++.++|||||||++|||++|
T Consensus 187 kL~Dfg~~~~~~~~~~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~ 263 (342)
T 1b6c_B 187 CIADLGLAVRHDSATDT---IDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDY 263 (342)
T ss_dssp EECCCTTCEEEETTTTE---EEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCC
T ss_pred EEEECCCceeccccccc---cccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCccccc
Confidence 99999999765432210 011223456899999999998753 33689999999999999999
Q ss_pred CCCCCCCch---hHHHHHHHhhcccchhhccCCCCC--CChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhc
Q 005224 580 MQPISHGKN---IVREVNIAYQSSMMFSVIDGNMGS--YPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNM 652 (707)
Q Consensus 580 ~~pf~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~ 652 (707)
..||..... ............. ....... ...+++..+.+++.+||+.+|.+||++.++++.|+.+.+.
T Consensus 264 ~~p~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~~ 337 (342)
T 1b6c_B 264 QLPYYDLVPSDPSVEEMRKVVCEQK----LRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 337 (342)
T ss_dssp CCTTTTTSCSSCCHHHHHHHHTTSC----CCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred ccCccccCcCcccHHHHHHHHHHHH----hCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHH
Confidence 778854321 1111111111110 1111111 1247788999999999999999999999999999998764
No 222
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=4e-40 Score=353.23 Aligned_cols=278 Identities=22% Similarity=0.364 Sum_probs=203.8
Q ss_pred hcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCC--hhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCe-----
Q 005224 374 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGE----- 445 (707)
Q Consensus 374 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~----- 445 (707)
.++|...+.||+|+||.||+|... +|+.||||++.... ....+.+.+|+.+++.++||||+++++++...+.
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 102 (353)
T 3coi_A 23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 102 (353)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccce
Confidence 357889999999999999999975 79999999987532 2334678899999999999999999999977653
Q ss_pred -EEEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccc
Q 005224 446 -QMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSR 524 (707)
Q Consensus 446 -~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~ 524 (707)
.++||||++ ++|.+++. ..+++..++.++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||+++
T Consensus 103 ~~~lv~e~~~-~~l~~~~~----~~~~~~~~~~i~~qi~~al~~LH~~~---ivH~dlkp~NIl~~~~~~~kl~Dfg~~~ 174 (353)
T 3coi_A 103 DFYLVMPFMQ-TDLQKIMG----LKFSEEKIQYLVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLAR 174 (353)
T ss_dssp CCEEEEECCS-EEGGGTTT----SCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCCGGGEEECTTCCEEECSTTCTT
T ss_pred eEEEEecccc-CCHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEeECCCCcEEEeeccccc
Confidence 499999996 68877763 24899999999999999999999999 9999999999999999999999999997
Q ss_pred cCCCCCCCCccccceecccccCCCccchhhhcc-CCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccch
Q 005224 525 LAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMF 603 (707)
Q Consensus 525 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDVwS~Gvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~ 603 (707)
.... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||...... +.........
T Consensus 175 ~~~~----------~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~-~~~~~i~~~~--- 240 (353)
T 3coi_A 175 HADA----------EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYL-DQLTQILKVT--- 240 (353)
T ss_dssp C------------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHH-HHHHHHHHHH---
T ss_pred CCCC----------CccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHh---
Confidence 6432 1234568999999999987 78899999999999999999999999754432 1111111100
Q ss_pred hhccCCCCCCChHHHHHH----HHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCC
Q 005224 604 SVIDGNMGSYPSECVEKF----IKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSS 679 (707)
Q Consensus 604 ~~~~~~~~~~~~~~~~~l----~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~ 679 (707)
+..+.+....+ .......+...+ ++.. ....+..++...+||.+||..||++|||++
T Consensus 241 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~----------~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~ 301 (353)
T 3coi_A 241 -------GVPGTEFVQKLNDKAAKSYIQSLPQTP--RKDF----------TQLFPRASPQAADLLEKMLELDVDKRLTAA 301 (353)
T ss_dssp -------CBCCHHHHTTCSCHHHHHHHHTSCBCS--SCCT----------TTTCTTSCHHHHHHHHHHSCSCTTTSCCHH
T ss_pred -------CCCCHHHHHHHhhHHHHHHHHhCcCCC--CccH----------HHhcCCcCHHHHHHHHHHcCCCcccCCCHH
Confidence 00011100000 000001111111 1111 011223344556899999999999999999
Q ss_pred cCCCCCCCCCCCC
Q 005224 680 SMLKHPYVSSDVS 692 (707)
Q Consensus 680 e~L~Hp~f~~~~~ 692 (707)
|+|+||||.....
T Consensus 302 e~l~hp~f~~~~~ 314 (353)
T 3coi_A 302 QALTHPFFEPFRD 314 (353)
T ss_dssp HHHTSGGGTTTCC
T ss_pred HHhcCcchhhccC
Confidence 9999999976443
No 223
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=7.5e-39 Score=335.78 Aligned_cols=252 Identities=23% Similarity=0.334 Sum_probs=201.4
Q ss_pred hcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCC----hhhHHHHHHHHHHHHccCCCcceeEEEEEE--eCCeE
Q 005224 374 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS----LQGEKEFLTEIQFLSRLHHRNLVSLVGYCD--EEGEQ 446 (707)
Q Consensus 374 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~----~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~--~~~~~ 446 (707)
.++|.+.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+++++.++||||+++++++. +.+..
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM 83 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CE
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeE
Confidence 468999999999999999999974 78999999987532 233567899999999999999999999984 45678
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccC
Q 005224 447 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 526 (707)
Q Consensus 447 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~ 526 (707)
++||||++++ |.+++.......+++..++.++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||++...
T Consensus 84 ~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~---i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~ 159 (305)
T 2wtk_C 84 YMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQG---IVHKDIKPGNLLLTTGGTLKISALGVAEAL 159 (305)
T ss_dssp EEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCcccEEEcCCCcEEeecccccccc
Confidence 9999999875 888887766677999999999999999999999999 999999999999999999999999999876
Q ss_pred CCCCCCCccccceecccccCCCccchhhhccCC--CCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchh
Q 005224 527 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHK--LTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFS 604 (707)
Q Consensus 527 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~s~~sDVwS~Gvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~ 604 (707)
..... ........||+.|+|||++.+.. ++.++|||||||++|||++|+.||...... .......
T Consensus 160 ~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-~~~~~i~------- 226 (305)
T 2wtk_C 160 HPFAA-----DDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIY-KLFENIG------- 226 (305)
T ss_dssp CTTCS-----SCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHH-------
T ss_pred Ccccc-----ccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHH-HHHHHHh-------
Confidence 43221 12233456899999999998754 377999999999999999999999754331 1111111
Q ss_pred hccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005224 605 VIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRE 645 (707)
Q Consensus 605 ~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~ 645 (707)
......+..++..+.+++.+|++.+|.+||++.++++.
T Consensus 227 ---~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 264 (305)
T 2wtk_C 227 ---KGSYAIPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQH 264 (305)
T ss_dssp ---HCCCCCCSSSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred ---cCCCCCCCccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 11122344556778888899999999999998888763
No 224
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.1e-39 Score=343.44 Aligned_cols=212 Identities=29% Similarity=0.448 Sum_probs=174.6
Q ss_pred ccHHHHHHHhcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHcc-CCCcceeEEEEEEe
Q 005224 365 FTYGEMALATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDE 442 (707)
Q Consensus 365 ~~~~~l~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~ 442 (707)
+.+.++....++|++.+.||+|+||.||+|... +++.||||++.... ...+.+.+|+.+++++ +||||+++++++..
T Consensus 14 ~~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 92 (326)
T 2x7f_A 14 IDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIK 92 (326)
T ss_dssp --CCCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-STTHHHHHHHHHHHHHCCSTTBCCEEEEEEE
T ss_pred ccchhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc-ccHHHHHHHHHHHHhccCCCCeeeeeeEEee
Confidence 334455556789999999999999999999974 78999999987543 2346789999999999 89999999999976
Q ss_pred ------CCeEEEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEE
Q 005224 443 ------EGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAK 516 (707)
Q Consensus 443 ------~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~k 516 (707)
.+..++||||+++|+|.+++.......+++..++.++.||+.||+|||+.+ |+||||||+||+++.++.+|
T Consensus 93 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~NIl~~~~~~~k 169 (326)
T 2x7f_A 93 KNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHK---VIHRDIKGQNVLLTENAEVK 169 (326)
T ss_dssp CC--CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTCCEE
T ss_pred ccCccccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCcHHHEEEcCCCCEE
Confidence 468899999999999999998765567999999999999999999999998 99999999999999999999
Q ss_pred EeeecccccCCCCCCCCccccceecccccCCCccchhhhc-----cCCCCCchhhHHHHHHHHHHHcCCCCCCCCc
Q 005224 517 VADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFL-----THKLTDKSDVYSLGVVFLELLTGMQPISHGK 587 (707)
Q Consensus 517 l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~s~~sDVwS~Gvll~elltG~~pf~~~~ 587 (707)
|+|||++....... .......|++.|+|||++. +..++.++|||||||++|||++|+.||....
T Consensus 170 l~Dfg~~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~ 238 (326)
T 2x7f_A 170 LVDFGVSAQLDRTV-------GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMH 238 (326)
T ss_dssp ECCCTTTC--------------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSC
T ss_pred EeeCcCceecCcCc-------cccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCc
Confidence 99999997653211 1223456899999999997 5678999999999999999999999996544
No 225
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=3.6e-39 Score=342.76 Aligned_cols=268 Identities=24% Similarity=0.384 Sum_probs=196.1
Q ss_pred HHHhcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHccC-CCcceeEEEEEE-------
Q 005224 371 ALATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLH-HRNLVSLVGYCD------- 441 (707)
Q Consensus 371 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~------- 441 (707)
.....+|++.+.||+|+||.||+|... +++.||||++........+.+.+|+.+++++. ||||+++++++.
T Consensus 24 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~ 103 (337)
T 3ll6_A 24 ELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESD 103 (337)
T ss_dssp EETTEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTST
T ss_pred eccCceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccc
Confidence 334568999999999999999999965 78999999987766666778999999999996 999999999994
Q ss_pred -eCCeEEEEEecCCCCCHHHHHhh-cCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEee
Q 005224 442 -EEGEQMLVYEFMSNGTLRDQLSA-KSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVAD 519 (707)
Q Consensus 442 -~~~~~~lV~E~~~~gsL~~~l~~-~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~D 519 (707)
.....++||||+. |+|.+++.. .....+++..++.++.||+.||+|||+.+ ++|+||||||+|||++.++.+||+|
T Consensus 104 ~~~~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~-~~ivH~Dikp~NIl~~~~~~~kl~D 181 (337)
T 3ll6_A 104 TGQAEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQK-PPIIHRDLKVENLLLSNQGTIKLCD 181 (337)
T ss_dssp TSSEEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSS-SCCBCCCCCGGGCEECTTSCEEBCC
T ss_pred cCCceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCC-CCEEEccCCcccEEECCCCCEEEec
Confidence 3345899999995 799998865 23456999999999999999999999875 4599999999999999999999999
Q ss_pred ecccccCCCCCCCCcc-----ccceecccccCCCccchhhh---ccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHH
Q 005224 520 FGLSRLAPVPDIEGIV-----PAHVSTVVKGTPGYLDPEYF---LTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVR 591 (707)
Q Consensus 520 FGla~~~~~~~~~~~~-----~~~~~~~~~gt~~y~aPE~~---~~~~~s~~sDVwS~Gvll~elltG~~pf~~~~~~~~ 591 (707)
||+++........... .........||+.|+|||++ .+..++.++|||||||++|||++|+.||...... .
T Consensus 182 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~-~ 260 (337)
T 3ll6_A 182 FGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKL-R 260 (337)
T ss_dssp CTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC--------
T ss_pred CccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHH-H
Confidence 9999876532211000 00111245689999999998 5677889999999999999999999999643321 0
Q ss_pred HHHHHhhcccchhhccCCC-CCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCC
Q 005224 592 EVNIAYQSSMMFSVIDGNM-GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMP 654 (707)
Q Consensus 592 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~ 654 (707)
+..... ...+...+..+.+++..||+.+|.+||++.++++.|+.+.....
T Consensus 261 -------------~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~~~ 311 (337)
T 3ll6_A 261 -------------IVNGKYSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAARN 311 (337)
T ss_dssp ------------------CCCCTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHTT
T ss_pred -------------hhcCcccCCcccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhccC
Confidence 011111 11222334568899999999999999999999999998876543
No 226
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=7.3e-41 Score=350.49 Aligned_cols=259 Identities=24% Similarity=0.369 Sum_probs=189.3
Q ss_pred cCCCccceEeeeCceEEEEEEeCCCcEEEEEEeccCChhhHHHHHHHHHHHHc--cCCCcceeEEEEEEeCC----eEEE
Q 005224 375 NNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSR--LHHRNLVSLVGYCDEEG----EQML 448 (707)
Q Consensus 375 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~--l~H~nIv~l~~~~~~~~----~~~l 448 (707)
++|.+.+.||+|+||+||+|.. +++.||||++... ....+.+|.+++.. ++||||+++++++.... ..++
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~l 78 (303)
T 3gxj_A 3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWL 78 (303)
T ss_dssp GGCCCCEEEEECSSSEEEEC-C-TTSCEEEEECC-T---THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEEE
T ss_pred ceeeehhhccCCCCeEEEEEEE-cCcceEEEEeccc---chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeEE
Confidence 5799999999999999999987 4889999998653 34567788888888 79999999999998776 7899
Q ss_pred EEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHH--------hCCCCCeEecCCCCCCEEEcCCCcEEEeee
Q 005224 449 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLH--------TEADPPVFHRDIKASNILLDHKFTAKVADF 520 (707)
Q Consensus 449 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH--------~~~~~~ivH~Dlkp~NILl~~~~~~kl~DF 520 (707)
||||+++|+|.+++... .+++..++.++.|++.||+||| +.+ |+||||||+|||++.++.+||+||
T Consensus 79 v~e~~~~g~L~~~l~~~---~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~---ivH~Dlkp~Nil~~~~~~~kl~DF 152 (303)
T 3gxj_A 79 VSDYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA---IAHRDLKSKNILVKKNGTCCIADL 152 (303)
T ss_dssp EEECCTTCCHHHHHHHC---CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC----CCCSCCCGGGC-CCTTCCC-BCCC
T ss_pred EEeccCCCCHHHHHhcc---CcchHHHHHHHHHHHHHHHHHHHHHhhhccCCC---EeeCcCCHHHeEECCCCCEEEeec
Confidence 99999999999999654 4788889999999999999999 777 999999999999999999999999
Q ss_pred cccccCCCCCCCCccccceecccccCCCccchhhhccC------CCCCchhhHHHHHHHHHHHcC----------CCCCC
Q 005224 521 GLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTH------KLTDKSDVYSLGVVFLELLTG----------MQPIS 584 (707)
Q Consensus 521 Gla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~------~~s~~sDVwS~Gvll~elltG----------~~pf~ 584 (707)
|+++........ .........||+.|+|||++.+. .++.++|||||||++|||++| ..||.
T Consensus 153 g~a~~~~~~~~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~ 229 (303)
T 3gxj_A 153 GLAVRHDSATDT---IDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYY 229 (303)
T ss_dssp CC-CCEETTTTE---ESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTT
T ss_pred CcceeccCCCcc---cccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeecccc
Confidence 999765432211 01112334689999999999876 344689999999999999999 66664
Q ss_pred CCchhHHHHHHHhhcccchhhccCC-CCCCC-----hHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 005224 585 HGKNIVREVNIAYQSSMMFSVIDGN-MGSYP-----SECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 651 (707)
Q Consensus 585 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-----~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~ 651 (707)
........ .......+.... ....+ .+++..+.+++.+||+.+|.+||++.++++.|+.+..
T Consensus 230 ~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~~ 297 (303)
T 3gxj_A 230 DLVPSDPS-----VEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ 297 (303)
T ss_dssp TTCC-CCC-----CC-CHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-CC
T ss_pred ccCCCCcc-----HHHHHHHHHHhhcCCCccccccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhhh
Confidence 32110000 000001111111 12233 3778899999999999999999999999999987654
No 227
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=7.8e-39 Score=341.28 Aligned_cols=204 Identities=26% Similarity=0.400 Sum_probs=172.2
Q ss_pred HhcCCCccceEeeeCceEEEEEEe-CCCcEEEEEEeccCCh-hhHHHHHHHHHH-HHccCCCcceeEEEEEEeCCeEEEE
Q 005224 373 ATNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSL-QGEKEFLTEIQF-LSRLHHRNLVSLVGYCDEEGEQMLV 449 (707)
Q Consensus 373 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~~-~~~~~~~~E~~~-l~~l~H~nIv~l~~~~~~~~~~~lV 449 (707)
..++|+..+.||+|+||+||+|.. .+|+.||||++..... ....++..|..+ ++.++||||+++++++...+..++|
T Consensus 49 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv 128 (340)
T 3an0_A 49 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWIC 128 (340)
T ss_dssp CSSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEE
T ss_pred ehhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEE
Confidence 456788899999999999999996 4799999999976432 334556666665 7788999999999999999999999
Q ss_pred EecCCCCCHHHHHhh--cCCCCcCHHHHHHHHHHHHHHHHHHHhC-CCCCeEecCCCCCCEEEcCCCcEEEeeecccccC
Q 005224 450 YEFMSNGTLRDQLSA--KSKEPLGFAMRLSIALGSSRGILYLHTE-ADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 526 (707)
Q Consensus 450 ~E~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~ia~gL~yLH~~-~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~ 526 (707)
|||+++ +|.+++.. .....+++..++.++.||+.||+|||++ + |+||||||+|||++.++.+||+|||+++..
T Consensus 129 ~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~ 204 (340)
T 3an0_A 129 MELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS---VIHRDVKPSNVLINALGQVKMCDFGISGYL 204 (340)
T ss_dssp ECCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHHTC---CCCCSCCSTTEEECSTTCEEECCCSHHHHH
T ss_pred HHHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCC---eecCCCCHHHEEECCCCCEEEeeCCCceec
Confidence 999975 99998865 2455799999999999999999999986 8 999999999999999999999999999765
Q ss_pred CCCCCCCccccceecccccCCCccchhhhcc----CCCCCchhhHHHHHHHHHHHcCCCCCCCCch
Q 005224 527 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT----HKLTDKSDVYSLGVVFLELLTGMQPISHGKN 588 (707)
Q Consensus 527 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~s~~sDVwS~Gvll~elltG~~pf~~~~~ 588 (707)
.. ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||.....
T Consensus 205 ~~--------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~ 262 (340)
T 3an0_A 205 VD--------SVAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGT 262 (340)
T ss_dssp SC--------HHHHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSC
T ss_pred cc--------ccccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccc
Confidence 32 112233568999999999753 4788999999999999999999999975443
No 228
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=8e-39 Score=332.92 Aligned_cols=259 Identities=20% Similarity=0.318 Sum_probs=188.6
Q ss_pred HhcCCCccceEeeeCceEEEEEEe-CCCcEEEEEEeccCChh-hH-HHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEE
Q 005224 373 ATNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQ-GE-KEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 449 (707)
Q Consensus 373 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~-~~-~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV 449 (707)
..++|++.+.||+|+||+||+|.. .+++.||||++...... .. +.+.++...++.++||||+++++++.+.+..++|
T Consensus 5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv 84 (290)
T 3fme_A 5 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWIC 84 (290)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEE
T ss_pred cHHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEE
Confidence 356899999999999999999997 47999999999764322 22 3344555568888999999999999999999999
Q ss_pred EecCCCCCHHHHHhh--cCCCCcCHHHHHHHHHHHHHHHHHHHhC-CCCCeEecCCCCCCEEEcCCCcEEEeeecccccC
Q 005224 450 YEFMSNGTLRDQLSA--KSKEPLGFAMRLSIALGSSRGILYLHTE-ADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 526 (707)
Q Consensus 450 ~E~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~ia~gL~yLH~~-~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~ 526 (707)
|||++ |+|.+++.. .....+++..++.++.|++.||+|||++ + |+||||||+||+++.++.+||+|||+++..
T Consensus 85 ~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 160 (290)
T 3fme_A 85 MELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS---VIHRDVKPSNVLINALGQVKMCDFGISGYL 160 (290)
T ss_dssp EECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSC---CCCCCCSGGGCEECTTCCEEBCCC------
T ss_pred Eehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCC---eecCCCCHHHEEECCCCCEEEeecCCcccc
Confidence 99996 599888764 2445699999999999999999999997 8 999999999999999999999999999765
Q ss_pred CCCCCCCccccceecccccCCCccchhhh----ccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccc
Q 005224 527 PVPDIEGIVPAHVSTVVKGTPGYLDPEYF----LTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMM 602 (707)
Q Consensus 527 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~s~~sDVwS~Gvll~elltG~~pf~~~~~~~~~~~~~~~~~~~ 602 (707)
.... ......||+.|+|||++ .+..++.++|||||||++|||++|+.||...............
T Consensus 161 ~~~~--------~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~---- 228 (290)
T 3fme_A 161 VDDV--------AKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVE---- 228 (290)
T ss_dssp -----------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHH----
T ss_pred cccc--------cccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHHhc----
Confidence 4321 22334689999999996 4567899999999999999999999999754332222211111
Q ss_pred hhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCC
Q 005224 603 FSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSML 682 (707)
Q Consensus 603 ~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L 682 (707)
......+.. ..++...+++.+||..||++|||++|++
T Consensus 229 ------------------------~~~~~~~~~-------------------~~~~~~~~li~~~l~~~p~~Rpt~~e~l 265 (290)
T 3fme_A 229 ------------------------EPSPQLPAD-------------------KFSAEFVDFTSQCLKKNSKERPTYPELM 265 (290)
T ss_dssp ------------------------SCCCCCCTT-------------------TSCHHHHHHHHHHTCSSGGGSCCHHHHT
T ss_pred ------------------------cCCCCcccc-------------------cCCHHHHHHHHHHhhcChhhCcCHHHHH
Confidence 100000000 1112233577778888888888888888
Q ss_pred CCCCCCCC
Q 005224 683 KHPYVSSD 690 (707)
Q Consensus 683 ~Hp~f~~~ 690 (707)
+||||...
T Consensus 266 ~hp~f~~~ 273 (290)
T 3fme_A 266 QHPFFTLH 273 (290)
T ss_dssp TSHHHHHH
T ss_pred hCcccccC
Confidence 88888644
No 229
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=8.7e-39 Score=355.27 Aligned_cols=270 Identities=20% Similarity=0.283 Sum_probs=211.5
Q ss_pred hcCCCccceEeeeCceEEEEEEe-CCCcEEEEEEeccCChhhHHHHHHHHHHHHccCC-CcceeEEEEEEeCCeEEEEEe
Q 005224 374 TNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHH-RNLVSLVGYCDEEGEQMLVYE 451 (707)
Q Consensus 374 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H-~nIv~l~~~~~~~~~~~lV~E 451 (707)
.++|++.++||+|+||.||+|.. .+++.||||++...... .++.+|+++++.++| +++..+..++...+..++|||
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~--~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme 83 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH--PQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMD 83 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSS--CCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccccc--HHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEE
Confidence 46899999999999999999996 47999999987654322 357889999999987 556666667788889999999
Q ss_pred cCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEE---cCCCcEEEeeecccccCCC
Q 005224 452 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILL---DHKFTAKVADFGLSRLAPV 528 (707)
Q Consensus 452 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl---~~~~~~kl~DFGla~~~~~ 528 (707)
|+ +++|.+++... ...+++..++.++.||+.||+|||+++ |+||||||+|||+ +.++.+||+|||+++....
T Consensus 84 ~~-g~sL~~ll~~~-~~~l~~~~~~~i~~qi~~aL~yLH~~g---IvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~ 158 (483)
T 3sv0_A 84 LL-GPSLEDLFNFC-SRKLSLKTVLMLADQMINRVEFVHSKS---FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRD 158 (483)
T ss_dssp CC-CCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECCGGGTTCEEECCCTTCEECBC
T ss_pred CC-CCCHHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccCcceEEEecCCCCCeEEEEeCCcceeccC
Confidence 99 99999999754 345999999999999999999999999 9999999999999 6889999999999987654
Q ss_pred CCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCch--hHHHHHHHhhcccchhhc
Q 005224 529 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKN--IVREVNIAYQSSMMFSVI 606 (707)
Q Consensus 529 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~elltG~~pf~~~~~--~~~~~~~~~~~~~~~~~~ 606 (707)
.......+........||+.|+|||++.+..++.++|||||||++|||++|+.||..... ....+...... .....
T Consensus 159 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~-~~~~~- 236 (483)
T 3sv0_A 159 TSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEK-KVATS- 236 (483)
T ss_dssp TTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHH-HHHSC-
T ss_pred CccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhc-ccccc-
Confidence 332211112223356799999999999999999999999999999999999999975332 11111111110 00000
Q ss_pred cCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCC
Q 005224 607 DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPE 655 (707)
Q Consensus 607 ~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~ 655 (707)
.......++.++.+++..||+.+|++||++.++++.|+.+......
T Consensus 237 ---~~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~~~~~ 282 (483)
T 3sv0_A 237 ---IEALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIREGF 282 (483)
T ss_dssp ---HHHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTC
T ss_pred ---HHHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHHcCC
Confidence 0001123356889999999999999999999999999998765443
No 230
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=2.3e-39 Score=337.11 Aligned_cols=260 Identities=24% Similarity=0.390 Sum_probs=201.2
Q ss_pred hcCCCccceEeeeCceEEEEEEeC--CCc--EEEEEEeccCC---hhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeE
Q 005224 374 TNNFNSSTQIGQGGYGKVYKGILP--DGT--VVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQ 446 (707)
Q Consensus 374 ~~~~~~~~~lG~G~~g~Vy~~~~~--~~~--~vavK~l~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~ 446 (707)
.++|++.+.||+|+||+||+|.+. +++ .||||++.... ....+.+.+|++++++++||||+++++++.... .
T Consensus 17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~ 95 (291)
T 1u46_A 17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-M 95 (291)
T ss_dssp GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-C
T ss_pred hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-c
Confidence 457889999999999999999853 333 68999887542 234567899999999999999999999997654 8
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccC
Q 005224 447 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 526 (707)
Q Consensus 447 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~ 526 (707)
++||||+++++|.+++.... ..+++..++.++.|+++||.|||+.+ |+||||||+||+++.++.+||+|||+++..
T Consensus 96 ~~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~Nili~~~~~~kl~Dfg~~~~~ 171 (291)
T 1u46_A 96 KMVTELAPLGSLLDRLRKHQ-GHFLLGTLSRYAVQVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRAL 171 (291)
T ss_dssp EEEEECCTTCBHHHHHHHHG-GGSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEEEETTEEEECCCTTCEEC
T ss_pred eeeEecccCCCHHHHHHhcc-CCcCHHHHHHHHHHHHHHHHHHHhCC---cccCCCchheEEEcCCCCEEEccccccccc
Confidence 89999999999999997642 35899999999999999999999998 999999999999999999999999999876
Q ss_pred CCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHhhcccchhh
Q 005224 527 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSV 605 (707)
Q Consensus 527 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~ 605 (707)
...... ........+|..|+|||++.+..++.++||||||+++|||++ |+.||...... +.......
T Consensus 172 ~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~-~~~~~~~~------- 239 (291)
T 1u46_A 172 PQNDDH----YVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGS-QILHKIDK------- 239 (291)
T ss_dssp CC-CCE----EEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-HHHHHHHT-------
T ss_pred cccccc----hhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHH-HHHHHHHc-------
Confidence 433211 112233457788999999999899999999999999999999 99999755432 11111111
Q ss_pred ccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 005224 606 IDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 651 (707)
Q Consensus 606 ~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~ 651 (707)
.......+..++..+.+++.+|++.+|.+||++.++++.|+++..
T Consensus 240 -~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~ 284 (291)
T 1u46_A 240 -EGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQP 284 (291)
T ss_dssp -SCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC-
T ss_pred -cCCCCCCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCc
Confidence 111223345667889999999999999999999999999987754
No 231
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=2e-38 Score=334.00 Aligned_cols=203 Identities=29% Similarity=0.451 Sum_probs=173.2
Q ss_pred HhcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEe
Q 005224 373 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 451 (707)
Q Consensus 373 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E 451 (707)
..++|++.+.||+|+||.||+|... +|+.||||++.... ..+.+.+|+++++.++||||+++++++...+..++|||
T Consensus 27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 104 (314)
T 3com_A 27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVME 104 (314)
T ss_dssp ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEee
Confidence 4568999999999999999999975 68999999997643 33578899999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCC
Q 005224 452 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 531 (707)
Q Consensus 452 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 531 (707)
|+++++|.+++... ...+++..++.++.|++.||.|||+.+ |+|+||||+||+++.++.+||+|||++.......
T Consensus 105 ~~~~~~L~~~~~~~-~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~- 179 (314)
T 3com_A 105 YCGAGSVSDIIRLR-NKTLTEDEIATILQSTLKGLEYLHFMR---KIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTM- 179 (314)
T ss_dssp CCTTEEHHHHHHHH-TCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEECBTTB-
T ss_pred cCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCC---CcCCCcCHHHEEECCCCCEEEeecccchhhhhhc-
Confidence 99999999999643 345899999999999999999999999 9999999999999999999999999997654221
Q ss_pred CCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCch
Q 005224 532 EGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKN 588 (707)
Q Consensus 532 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~elltG~~pf~~~~~ 588 (707)
.......|++.|+|||++.+..++.++|||||||++|||++|+.||.....
T Consensus 180 ------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~ 230 (314)
T 3com_A 180 ------AKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHP 230 (314)
T ss_dssp ------SCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCH
T ss_pred ------cccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCCh
Confidence 122345689999999999999999999999999999999999999975443
No 232
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=1.6e-39 Score=338.14 Aligned_cols=257 Identities=25% Similarity=0.365 Sum_probs=201.9
Q ss_pred hcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCC--hhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEE
Q 005224 374 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 450 (707)
Q Consensus 374 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~ 450 (707)
.++|++.+.||+|+||+||+|... +++.||||++.... ....+.+.+|++++++++||||+++++++...+..++||
T Consensus 21 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 100 (287)
T 2wei_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVG 100 (287)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEEE
Confidence 468999999999999999999975 78999999986532 234568899999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCC---CcEEEeeecccccCC
Q 005224 451 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHK---FTAKVADFGLSRLAP 527 (707)
Q Consensus 451 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~---~~~kl~DFGla~~~~ 527 (707)
||+++++|.+++.... .+++..++.++.|++.||+|||+.+ |+||||||+||+++.+ +.+||+|||++....
T Consensus 101 e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~ 175 (287)
T 2wei_A 101 ELYTGGELFDEIIKRK--RFSEHDAARIIKQVFSGITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ 175 (287)
T ss_dssp CCCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBC
T ss_pred EccCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCChhhEEEecCCCcccEEEeccCcceeec
Confidence 9999999999886543 4899999999999999999999998 9999999999999754 479999999998654
Q ss_pred CCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhcc
Q 005224 528 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVID 607 (707)
Q Consensus 528 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 607 (707)
... ......|++.|+|||++.+ .++.++||||||+++|||++|+.||...... +....
T Consensus 176 ~~~--------~~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-~~~~~------------ 233 (287)
T 2wei_A 176 QNT--------KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEY-DILKR------------ 233 (287)
T ss_dssp CCS--------SCSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHH------------
T ss_pred CCC--------ccccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHH-HHHHH------------
Confidence 321 1223458899999999876 4899999999999999999999999654321 11100
Q ss_pred CCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCCCCCCC
Q 005224 608 GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYV 687 (707)
Q Consensus 608 ~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f 687 (707)
+........ .| .....+....++|.+||..||++|||++|+|+||||
T Consensus 234 ----------------~~~~~~~~~---~~--------------~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~~ 280 (287)
T 2wei_A 234 ----------------VETGKYAFD---LP--------------QWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWI 280 (287)
T ss_dssp ----------------HHHCCCCCC---SG--------------GGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHSHHH
T ss_pred ----------------HHcCCCCCC---ch--------------hhhhcCHHHHHHHHHHcccChhhCcCHHHHhcCHHH
Confidence 000000000 00 001112233467888888899999999999999998
Q ss_pred CCC
Q 005224 688 SSD 690 (707)
Q Consensus 688 ~~~ 690 (707)
...
T Consensus 281 ~~~ 283 (287)
T 2wei_A 281 QKY 283 (287)
T ss_dssp HHH
T ss_pred hcc
Confidence 643
No 233
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=5.6e-39 Score=370.55 Aligned_cols=262 Identities=27% Similarity=0.432 Sum_probs=213.0
Q ss_pred HHHHHhcCCCccceEeeeCceEEEEEEeC----CCcEEEEEEeccCC-hhhHHHHHHHHHHHHccCCCcceeEEEEEEeC
Q 005224 369 EMALATNNFNSSTQIGQGGYGKVYKGILP----DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE 443 (707)
Q Consensus 369 ~l~~~~~~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~ 443 (707)
+.....++|++.+.||+|+||+||+|.+. .+..||||++.... ....+.+.+|+.++++++||||+++++++. +
T Consensus 384 ~~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~ 462 (656)
T 2j0j_A 384 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-E 462 (656)
T ss_dssp GTBCCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-S
T ss_pred ccccccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-c
Confidence 44455678889999999999999999964 25689999987643 333467999999999999999999999985 4
Q ss_pred CeEEEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeeccc
Q 005224 444 GEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLS 523 (707)
Q Consensus 444 ~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla 523 (707)
+..++||||+++|+|.+++... ...+++..++.++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||++
T Consensus 463 ~~~~lv~E~~~~g~L~~~l~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDikp~NILl~~~~~vkL~DFG~a 538 (656)
T 2j0j_A 463 NPVWIIMELCTLGELRSFLQVR-KFSLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLS 538 (656)
T ss_dssp SSCEEEEECCTTCBHHHHHHHT-TTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCCCCC
T ss_pred CceEEEEEcCCCCcHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHhCC---ccccccchHhEEEeCCCCEEEEecCCC
Confidence 6789999999999999999754 345899999999999999999999998 999999999999999999999999999
Q ss_pred ccCCCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHhhcccc
Q 005224 524 RLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMM 602 (707)
Q Consensus 524 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~ellt-G~~pf~~~~~~~~~~~~~~~~~~~ 602 (707)
+...... ........+|+.|+|||++.+..++.++|||||||++|||++ |..||...... +...
T Consensus 539 ~~~~~~~------~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~-~~~~-------- 603 (656)
T 2j0j_A 539 RYMEDST------YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN-DVIG-------- 603 (656)
T ss_dssp CSCCC----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-HHHH--------
T ss_pred eecCCCc------ceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHH-HHHH--------
Confidence 8764322 112223456789999999999999999999999999999997 99999754432 1111
Q ss_pred hhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 005224 603 FSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 651 (707)
Q Consensus 603 ~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~ 651 (707)
.+..+.....+..++..+.+++.+||+.+|.+||++.++++.|+.+..
T Consensus 604 -~i~~~~~~~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il~ 651 (656)
T 2j0j_A 604 -RIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILE 651 (656)
T ss_dssp -HHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -HHHcCCCCCCCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHH
Confidence 112233344566777889999999999999999999999999998764
No 234
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=6.4e-39 Score=353.41 Aligned_cols=201 Identities=25% Similarity=0.315 Sum_probs=157.9
Q ss_pred CCCccceEeeeCceEEEEEEeCCCcEEEEEEeccCChhhHHHHHHHHHHHHcc-CCCcceeEEEEEEeCCeEEEEEecCC
Q 005224 376 NFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQMLVYEFMS 454 (707)
Q Consensus 376 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lV~E~~~ 454 (707)
.|...+.||+|+||+||.+...+|+.||||++... ..+.+.+|+++++++ +||||+++++++.+.+..++||||++
T Consensus 16 ~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~ 92 (434)
T 2rio_A 16 LVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN 92 (434)
T ss_dssp CEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGG---GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS
T ss_pred eeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH---HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC
Confidence 44556889999999998776678999999998653 235678999999886 89999999999999999999999995
Q ss_pred CCCHHHHHhhcCCCC-----cCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCC-------------CcEE
Q 005224 455 NGTLRDQLSAKSKEP-----LGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHK-------------FTAK 516 (707)
Q Consensus 455 ~gsL~~~l~~~~~~~-----l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~-------------~~~k 516 (707)
|+|.+++....... ..+..++.++.||+.||+|||+.+ |+||||||+|||++.+ +.+|
T Consensus 93 -gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~k 168 (434)
T 2rio_A 93 -LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLK---IIHRDLKPQNILVSTSSRFTADQQTGAENLRIL 168 (434)
T ss_dssp -EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEECCHHHHSCCTTCCCSCEEE
T ss_pred -CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCC---ccccCCChHhEEEecCcccccccccCCCceEEE
Confidence 69999997643221 133346789999999999999998 9999999999999754 4899
Q ss_pred EeeecccccCCCCCCCCccccceecccccCCCccchhhhcc-------CCCCCchhhHHHHHHHHHHHc-CCCCCCCC
Q 005224 517 VADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-------HKLTDKSDVYSLGVVFLELLT-GMQPISHG 586 (707)
Q Consensus 517 l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-------~~~s~~sDVwS~Gvll~ellt-G~~pf~~~ 586 (707)
|+|||+++......... ........||+.|+|||++.+ ..++.++|||||||++|||++ |+.||...
T Consensus 169 L~DFG~a~~~~~~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~ 243 (434)
T 2rio_A 169 ISDFGLCKKLDSGQSSF---RTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDK 243 (434)
T ss_dssp ECCCTTCEECCC-----------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCST
T ss_pred EcccccceecCCCCccc---eeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCc
Confidence 99999998765422110 111234579999999999976 678999999999999999999 99999643
No 235
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=2.9e-39 Score=345.56 Aligned_cols=275 Identities=20% Similarity=0.301 Sum_probs=211.7
Q ss_pred hcCCCccceEeeeCceEEEEEEeCCCcEEEEEEeccCChhh-----------------HHHHHHHHHHHHccCCCcceeE
Q 005224 374 TNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQG-----------------EKEFLTEIQFLSRLHHRNLVSL 436 (707)
Q Consensus 374 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~-----------------~~~~~~E~~~l~~l~H~nIv~l 436 (707)
.++|++.+.||+|+||.||+|.. +++.||||++....... .+.+.+|++++++++||||+++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 46899999999999999999999 89999999986432211 1689999999999999999999
Q ss_pred EEEEEeCCeEEEEEecCCCCCHHHH------HhhcCCCCcCHHHHHHHHHHHHHHHHHHHh-CCCCCeEecCCCCCCEEE
Q 005224 437 VGYCDEEGEQMLVYEFMSNGTLRDQ------LSAKSKEPLGFAMRLSIALGSSRGILYLHT-EADPPVFHRDIKASNILL 509 (707)
Q Consensus 437 ~~~~~~~~~~~lV~E~~~~gsL~~~------l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~ivH~Dlkp~NILl 509 (707)
++++.+.+..++||||+++|+|.++ +.......+++..++.++.|++.||.|||+ .+ |+||||||+||++
T Consensus 109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~---i~H~dl~p~Nil~ 185 (348)
T 2pml_X 109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKN---ICHRDVKPSNILM 185 (348)
T ss_dssp SEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTSC---EECCCCCGGGEEE
T ss_pred EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccCC---EeecCCChHhEEE
Confidence 9999999999999999999999998 655446679999999999999999999999 88 9999999999999
Q ss_pred cCCCcEEEeeecccccCCCCCCCCccccceecccccCCCccchhhhccC-CCCC-chhhHHHHHHHHHHHcCCCCCCCCc
Q 005224 510 DHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTH-KLTD-KSDVYSLGVVFLELLTGMQPISHGK 587 (707)
Q Consensus 510 ~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~-~sDVwS~Gvll~elltG~~pf~~~~ 587 (707)
+.++.+||+|||++...... ......|+..|+|||++.+. .++. ++|||||||++|||++|+.||....
T Consensus 186 ~~~~~~kl~dfg~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~ 256 (348)
T 2pml_X 186 DKNGRVKLSDFGESEYMVDK---------KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKI 256 (348)
T ss_dssp CTTSCEEECCCTTCEECBTT---------EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred cCCCcEEEeccccccccccc---------cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 99999999999999865321 23445689999999999887 6666 9999999999999999999997654
Q ss_pred hhHHHHHHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCC
Q 005224 588 NIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSE 667 (707)
Q Consensus 588 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~ 667 (707)
...+......... ..++..... .. .+...... .......+....+|+.+|
T Consensus 257 ~~~~~~~~i~~~~----------~~~~~~~~~--------~~--~~~~~~~~----------~~~~~~~~~~l~~li~~~ 306 (348)
T 2pml_X 257 SLVELFNNIRTKN----------IEYPLDRNH--------FL--YPLTNKKS----------TCSNNFLSNEDIDFLKLF 306 (348)
T ss_dssp CSHHHHHHHTSCC----------CCCCCSSSS--------ST--TTTCC------------------CCCHHHHHHHHHH
T ss_pred cHHHHHHHHhccC----------cCCccchhh--------hh--cccccccc----------ccchhhcCHHHHHHHHHH
Confidence 4222222111110 001100000 00 00000000 001123344556899999
Q ss_pred CCCCCCCCCCCCcCCCCCCCCCCC
Q 005224 668 HTSKEETPPSSSSMLKHPYVSSDV 691 (707)
Q Consensus 668 L~~dP~~R~sa~e~L~Hp~f~~~~ 691 (707)
|..||++|||++|+|+||||....
T Consensus 307 L~~dP~~Rps~~e~l~hp~f~~~~ 330 (348)
T 2pml_X 307 LRKNPAERITSEDALKHEWLADTN 330 (348)
T ss_dssp CCSSGGGSCCHHHHHTSGGGTTCC
T ss_pred ccCChhhCCCHHHHhcCccccCCC
Confidence 999999999999999999998643
No 236
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=5.8e-39 Score=352.97 Aligned_cols=258 Identities=24% Similarity=0.347 Sum_probs=188.6
Q ss_pred HhcCCCccceEeeeCceEEEEEEeCCCcEEEEEEeccCChhhHHHHHHHHHHHHcc-CCCcceeEEEEEEeCCeEEEEEe
Q 005224 373 ATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQMLVYE 451 (707)
Q Consensus 373 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lV~E 451 (707)
...+|...+.||+|+||+||.....+++.||||++...... .+.+|+++++.+ +||||+++++++.+.+..++|||
T Consensus 22 ~~~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~~---~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E 98 (432)
T 3p23_A 22 GKISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFS---FADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIE 98 (432)
T ss_dssp TTEEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTEE---ECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ccEEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHHH---HHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEE
Confidence 44568889999999999976655668999999998754332 356799999999 79999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcC-----CCcEEEeeecccccC
Q 005224 452 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDH-----KFTAKVADFGLSRLA 526 (707)
Q Consensus 452 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~-----~~~~kl~DFGla~~~ 526 (707)
|++ |+|.+++..... ...+..++.++.||++||+|||+.+ |+||||||+|||++. ...+||+|||+++..
T Consensus 99 ~~~-g~L~~~l~~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~ 173 (432)
T 3p23_A 99 LCA-ATLQEYVEQKDF-AHLGLEPITLLQQTTSGLAHLHSLN---IVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKL 173 (432)
T ss_dssp CCS-EEHHHHHHSSSC-CCCSSCHHHHHHHHHHHHHHHHHTT---CCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC
T ss_pred CCC-CCHHHHHHhcCC-CccchhHHHHHHHHHHHHHHHHHCc---CEeCCCCHHHEEEecCCCCCceeEEEecccceeec
Confidence 995 699999976542 3444556789999999999999999 999999999999943 346889999999876
Q ss_pred CCCCCCCccccceecccccCCCccchhhhc---cCCCCCchhhHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHhhcccc
Q 005224 527 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFL---THKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMM 602 (707)
Q Consensus 527 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~s~~sDVwS~Gvll~ellt-G~~pf~~~~~~~~~~~~~~~~~~~ 602 (707)
...... ........||+.|+|||++. ...++.++|||||||++|||++ |..||....... .......
T Consensus 174 ~~~~~~----~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~--~~~~~~~--- 244 (432)
T 3p23_A 174 AVGRHS----FSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQ--ANILLGA--- 244 (432)
T ss_dssp ----------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHH--HHHHTTC---
T ss_pred cCCCcc----eeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHH--HHHHhcc---
Confidence 432110 11234467999999999998 4677889999999999999999 888985432211 1100000
Q ss_pred hhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCC
Q 005224 603 FSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSML 682 (707)
Q Consensus 603 ~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L 682 (707)
+ .......+.... ..+.+||.+||..||++|||++|+|
T Consensus 245 -------------------------~-~~~~~~~~~~~~----------------~~~~~li~~~L~~dP~~Rps~~evl 282 (432)
T 3p23_A 245 -------------------------C-SLDCLHPEKHED----------------VIARELIEKMIAMDPQKRPSAKHVL 282 (432)
T ss_dssp -------------------------C-CCTTSCTTCHHH----------------HHHHHHHHHHSCSSGGGSCCHHHHH
T ss_pred -------------------------C-CccccCcccccc----------------HHHHHHHHHHHhCCHhhCCCHHHHH
Confidence 0 000000000000 0123678888999999999999999
Q ss_pred CCCCCCC
Q 005224 683 KHPYVSS 689 (707)
Q Consensus 683 ~Hp~f~~ 689 (707)
+||||.+
T Consensus 283 ~hp~f~~ 289 (432)
T 3p23_A 283 KHPFFWS 289 (432)
T ss_dssp TSTTTCC
T ss_pred hCccccC
Confidence 9999975
No 237
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=2.4e-38 Score=333.47 Aligned_cols=212 Identities=25% Similarity=0.346 Sum_probs=172.8
Q ss_pred ccHHHHHHHhcCCCccceEeeeCceEEEEEEeCCCcEEEEEEeccCC--hhhHHHHHHHHHHHHccC--CCcceeEEEEE
Q 005224 365 FTYGEMALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLH--HRNLVSLVGYC 440 (707)
Q Consensus 365 ~~~~~l~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~--H~nIv~l~~~~ 440 (707)
+.+..+....++|++.+.||+|+||.||+|...+++.||||++.... ....+.+.+|++++++++ |+||+++++++
T Consensus 18 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~ 97 (313)
T 3cek_A 18 LYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYE 97 (313)
T ss_dssp --CCEEEETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEE
T ss_pred CCeeeeeeccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEe
Confidence 34444555667899999999999999999998889999999986533 334567899999999997 59999999999
Q ss_pred EeCCeEEEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeee
Q 005224 441 DEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADF 520 (707)
Q Consensus 441 ~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DF 520 (707)
...+..++||| +.+++|.+++... ..+++..++.++.|+++||.|||+.+ |+||||||+|||+++ +.+||+||
T Consensus 98 ~~~~~~~lv~e-~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIl~~~-~~~kL~Df 170 (313)
T 3cek_A 98 ITDQYIYMVME-CGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIVD-GMLKLIDF 170 (313)
T ss_dssp ECSSEEEEEEC-CCSEEHHHHHHHC--SSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEET-TEEEECCC
T ss_pred ecCCEEEEEEe-cCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCcccEEEEC-CeEEEeec
Confidence 99999999999 5588999999764 35899999999999999999999998 999999999999975 89999999
Q ss_pred cccccCCCCCCCCccccceecccccCCCccchhhhcc-----------CCCCCchhhHHHHHHHHHHHcCCCCCCCCch
Q 005224 521 GLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-----------HKLTDKSDVYSLGVVFLELLTGMQPISHGKN 588 (707)
Q Consensus 521 Gla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~s~~sDVwS~Gvll~elltG~~pf~~~~~ 588 (707)
|+++....... ........|++.|+|||++.+ ..++.++|||||||++|||++|+.||.....
T Consensus 171 g~~~~~~~~~~-----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~ 244 (313)
T 3cek_A 171 GIANQMQPDTT-----SVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN 244 (313)
T ss_dssp SSSCC-------------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCS
T ss_pred cccccccCccc-----cccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHH
Confidence 99986543211 112234568999999999976 4788899999999999999999999975443
No 238
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=8.7e-38 Score=326.76 Aligned_cols=200 Identities=25% Similarity=0.390 Sum_probs=162.8
Q ss_pred hcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHccCCCcceeEEEEEEe----------
Q 005224 374 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE---------- 442 (707)
Q Consensus 374 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~---------- 442 (707)
.++|++.+.||+|+||+||+|... +++.||||++.. .....+.+.+|+++++.++||||+++++++.+
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 83 (303)
T 1zy4_A 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRH-TEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTA 83 (303)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEE-EHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC----
T ss_pred cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEec-cHHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcc
Confidence 467899999999999999999974 799999999865 23345678999999999999999999999865
Q ss_pred ---CCeEEEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEee
Q 005224 443 ---EGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVAD 519 (707)
Q Consensus 443 ---~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~D 519 (707)
.+..++||||+++|+|.+++... ...+++..++.++.|+++||+|||+++ |+||||||+||+++.++.+||+|
T Consensus 84 ~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dlkp~Nil~~~~~~~kl~d 159 (303)
T 1zy4_A 84 VKKKSTLFIQMEYCENGTLYDLIHSE-NLNQQRDEYWRLFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGD 159 (303)
T ss_dssp --CEEEEEEEEECCCSCBHHHHHHHS-CGGGCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECC
T ss_pred cccCCceEEEEecCCCCCHHHhhhcc-ccccchHHHHHHHHHHHHHHHHHHhCC---eecccCCHHhEEEcCCCCEEEee
Confidence 35679999999999999999764 345788999999999999999999998 99999999999999999999999
Q ss_pred ecccccCCCCCCCCc-------cccceecccccCCCccchhhhccC-CCCCchhhHHHHHHHHHHHc
Q 005224 520 FGLSRLAPVPDIEGI-------VPAHVSTVVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVFLELLT 578 (707)
Q Consensus 520 FGla~~~~~~~~~~~-------~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~sDVwS~Gvll~ellt 578 (707)
||+++.......... ..........||+.|+|||++.+. .++.++|||||||++|||++
T Consensus 160 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~ 226 (303)
T 1zy4_A 160 FGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY 226 (303)
T ss_dssp CCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS
T ss_pred CcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh
Confidence 999986543210000 001123345689999999999864 78999999999999999998
No 239
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=6.8e-38 Score=332.14 Aligned_cols=250 Identities=26% Similarity=0.411 Sum_probs=172.8
Q ss_pred hcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCCh-hhHHHHHHHHH-HHHccCCCcceeEEEEEEeCCeEEEEE
Q 005224 374 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL-QGEKEFLTEIQ-FLSRLHHRNLVSLVGYCDEEGEQMLVY 450 (707)
Q Consensus 374 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~~E~~-~l~~l~H~nIv~l~~~~~~~~~~~lV~ 450 (707)
.++|+..+.||+|+||.||+|... +|+.||||++..... ....++..|+. +++.++||||+++++++...+..++||
T Consensus 21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~ 100 (327)
T 3aln_A 21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICM 100 (327)
T ss_dssp SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEE
Confidence 467889999999999999999975 799999999976432 33445666666 777789999999999999999999999
Q ss_pred ecCCCCCHHHHHhh---cCCCCcCHHHHHHHHHHHHHHHHHHHhC-CCCCeEecCCCCCCEEEcCCCcEEEeeecccccC
Q 005224 451 EFMSNGTLRDQLSA---KSKEPLGFAMRLSIALGSSRGILYLHTE-ADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 526 (707)
Q Consensus 451 E~~~~gsL~~~l~~---~~~~~l~~~~~~~i~~~ia~gL~yLH~~-~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~ 526 (707)
||+++ +|.+++.. .....+++..+..++.|++.||.|||+. + |+||||||+||+++.++.+||+|||+++..
T Consensus 101 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~---ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~ 176 (327)
T 3aln_A 101 ELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLK---IIHRDIKPSNILLDRSGNIKLCDFGISGQL 176 (327)
T ss_dssp CCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHS---CCCSCCCGGGEEEETTTEEEECCCSSSCC-
T ss_pred eecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCC---EeECCCCHHHEEEcCCCCEEEccCCCceec
Confidence 99975 88888753 2345699999999999999999999998 8 999999999999999999999999999765
Q ss_pred CCCCCCCccccceecccccCCCccchhhh----ccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccc
Q 005224 527 PVPDIEGIVPAHVSTVVKGTPGYLDPEYF----LTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMM 602 (707)
Q Consensus 527 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~s~~sDVwS~Gvll~elltG~~pf~~~~~~~~~~~~~~~~~~~ 602 (707)
.... ......||+.|+|||++ .+..++.++|||||||++|||++|+.||.......+. .
T Consensus 177 ~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~---------~ 239 (327)
T 3aln_A 177 VDSI--------AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQ---------L 239 (327)
T ss_dssp -------------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC----------------
T ss_pred cccc--------ccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHH---------H
Confidence 4221 12234689999999999 4667899999999999999999999999754331111 1
Q ss_pred hhhccCCCCCC----ChHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005224 603 FSVIDGNMGSY----PSECVEKFIKLALKCCQDETDARPSMSEVMR 644 (707)
Q Consensus 603 ~~~~~~~~~~~----~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~ 644 (707)
.....+..... ...++..+.+++..||+.+|.+||++.++++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 285 (327)
T 3aln_A 240 TQVVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLK 285 (327)
T ss_dssp CCCCCSCCCCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred HHHhcCCCCCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence 11111111111 1234455666666666666666666666543
No 240
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=3.5e-39 Score=340.50 Aligned_cols=268 Identities=22% Similarity=0.312 Sum_probs=206.0
Q ss_pred cHHHHHHHhcCCCccceEeeeCceEEEEEEeCCCcEEEEEEeccCCh--hhHHHHHHHHHHHHccCCCcceeEEEEEEeC
Q 005224 366 TYGEMALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE 443 (707)
Q Consensus 366 ~~~~l~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~ 443 (707)
...++....++|++.+.||+|+||.||+|..++ .||+|++..... ...+.+.+|+.++++++|+||+++++++...
T Consensus 24 ~~~~~~i~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~ 101 (319)
T 2y4i_B 24 FLQEWDIPFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSP 101 (319)
T ss_dssp CGGGSSSCCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECS
T ss_pred ccccccCCHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecC
Confidence 344555667889999999999999999999854 499999875322 2234677899999999999999999999999
Q ss_pred CeEEEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeeccc
Q 005224 444 GEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLS 523 (707)
Q Consensus 444 ~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla 523 (707)
+..++||||+++++|.+++... ...+++..++.++.|++.||+|||+.+ |+||||||+||+++ ++.+||+|||++
T Consensus 102 ~~~~iv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~~---i~H~dlkp~NIl~~-~~~~~l~Dfg~~ 176 (319)
T 2y4i_B 102 PHLAIITSLCKGRTLYSVVRDA-KIVLDVNKTRQIAQEIVKGMGYLHAKG---ILHKDLKSKNVFYD-NGKVVITDFGLF 176 (319)
T ss_dssp SCEEEECBCCCSEEHHHHTTSS-CCCCCSHHHHHHHHHHHHHHHHHHHTT---CCCCCCCSTTEEEC---CCEECCCSCC
T ss_pred CceEEEeecccCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCC---ccccCCChhhEEEe-CCCEEEeecCCc
Confidence 9999999999999999999654 346899999999999999999999999 99999999999998 679999999998
Q ss_pred ccCCCCCCCCccccceecccccCCCccchhhhcc---------CCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHH
Q 005224 524 RLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT---------HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVN 594 (707)
Q Consensus 524 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---------~~~s~~sDVwS~Gvll~elltG~~pf~~~~~~~~~~~ 594 (707)
+........ ..........|++.|+|||++.+ ..++.++|||||||++|||++|+.||........ ..
T Consensus 177 ~~~~~~~~~--~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~-~~ 253 (319)
T 2y4i_B 177 SISGVLQAG--RREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAI-IW 253 (319)
T ss_dssp C------------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHH-HH
T ss_pred ccccccccc--ccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-HH
Confidence 765322111 01122234568999999999975 4578899999999999999999999975543211 11
Q ss_pred HHhhcccchhhccCCCCC-CChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhc
Q 005224 595 IAYQSSMMFSVIDGNMGS-YPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNM 652 (707)
Q Consensus 595 ~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~ 652 (707)
.. ..+.... .+..++..+.+++..||+.+|.+||++.++++.|+.+...
T Consensus 254 ~~---------~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~ 303 (319)
T 2y4i_B 254 QM---------GTGMKPNLSQIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKR 303 (319)
T ss_dssp HH---------HTTCCCCCCCSSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC---
T ss_pred Hh---------ccCCCCCCCcCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHh
Confidence 11 1111111 1223456788999999999999999999999999877654
No 241
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=7.5e-39 Score=363.51 Aligned_cols=203 Identities=28% Similarity=0.423 Sum_probs=174.6
Q ss_pred cCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccC-ChhhHHHHHHHHHHHHccCCCcceeEEEEEEe------CCeE
Q 005224 375 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEG-SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE------EGEQ 446 (707)
Q Consensus 375 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~------~~~~ 446 (707)
++|++.+.||+|+||+||+|... +|+.||||++... .....+.+.+|++++++++||||+++++++.. .+..
T Consensus 14 grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~ 93 (676)
T 3qa8_A 14 GPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLP 93 (676)
T ss_dssp ---CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSC
T ss_pred CCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeE
Confidence 68999999999999999999974 7899999998764 33345678999999999999999999999755 6678
Q ss_pred EEEEecCCCCCHHHHHhhcC-CCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCc---EEEeeecc
Q 005224 447 MLVYEFMSNGTLRDQLSAKS-KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFT---AKVADFGL 522 (707)
Q Consensus 447 ~lV~E~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~---~kl~DFGl 522 (707)
++||||+++|+|.+++.... ...+++..++.++.|++.||+|||+.+ |+||||||+||+++.++. +||+|||+
T Consensus 94 ~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~g---IVHrDLKP~NILl~~~g~~~~vKL~DFG~ 170 (676)
T 3qa8_A 94 LLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENR---IIHRDLKPENIVLQPGPQRLIHKIIDLGY 170 (676)
T ss_dssp CCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTT---BCCCCCCSTTEEEECCSSSCEEEECSCCC
T ss_pred EEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCCHHHeEeecCCCceeEEEccccc
Confidence 99999999999999997643 335889999999999999999999998 999999999999997765 99999999
Q ss_pred cccCCCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCch
Q 005224 523 SRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKN 588 (707)
Q Consensus 523 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~elltG~~pf~~~~~ 588 (707)
++...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.....
T Consensus 171 a~~~~~~~--------~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~ 228 (676)
T 3qa8_A 171 AKELDQGE--------LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQ 228 (676)
T ss_dssp CCBTTSCC--------CCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCH
T ss_pred cccccccc--------ccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccc
Confidence 98764322 22345789999999999999999999999999999999999999976544
No 242
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=9.5e-38 Score=332.44 Aligned_cols=197 Identities=23% Similarity=0.354 Sum_probs=148.1
Q ss_pred hcCCCccc-eEeeeCceEEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHccCCCcceeEEEEEEe----CCeEE
Q 005224 374 TNNFNSST-QIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE----EGEQM 447 (707)
Q Consensus 374 ~~~~~~~~-~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~----~~~~~ 447 (707)
.++|.+.+ .||+|+||+||+|... +++.||||++.... +...+....++.++||||+++++++.. ....+
T Consensus 27 ~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 102 (336)
T 3fhr_A 27 TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP----KARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLL 102 (336)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH----HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred cceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH----HHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEE
Confidence 46788854 6999999999999976 79999999986532 122223334566799999999999976 44589
Q ss_pred EEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcC---CCcEEEeeecccc
Q 005224 448 LVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDH---KFTAKVADFGLSR 524 (707)
Q Consensus 448 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~---~~~~kl~DFGla~ 524 (707)
+||||+++|+|.+++.......+++..++.++.|++.||+|||+.+ |+||||||+|||++. ++.+||+|||+++
T Consensus 103 lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~---ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~ 179 (336)
T 3fhr_A 103 IIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHN---IAHRDVKPENLLYTSKEKDAVLKLTDFGFAK 179 (336)
T ss_dssp EEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCSSTTCCEEECCCTTCE
T ss_pred EEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEEecCCCceEEEeccccce
Confidence 9999999999999998776677999999999999999999999999 999999999999976 4559999999998
Q ss_pred cCCCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCC
Q 005224 525 LAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 586 (707)
Q Consensus 525 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~elltG~~pf~~~ 586 (707)
..... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 180 ~~~~~---------~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 232 (336)
T 3fhr_A 180 ETTQN---------ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSN 232 (336)
T ss_dssp EC-------------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC---
T ss_pred ecccc---------ccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCc
Confidence 65421 223456799999999999889999999999999999999999999643
No 243
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=5.4e-38 Score=330.54 Aligned_cols=201 Identities=27% Similarity=0.416 Sum_probs=164.9
Q ss_pred HHHhcCCCccceEeeeCceEEEEEEe-CCCcEEEEEEeccCChh------hHHHHHHHHHHHHcc----CCCcceeEEEE
Q 005224 371 ALATNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQ------GEKEFLTEIQFLSRL----HHRNLVSLVGY 439 (707)
Q Consensus 371 ~~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~------~~~~~~~E~~~l~~l----~H~nIv~l~~~ 439 (707)
....++|++.+.||+|+||.||+|.. .+++.||||++...... ....+.+|+.+++++ +|+||++++++
T Consensus 27 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~ 106 (312)
T 2iwi_A 27 EAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDW 106 (312)
T ss_dssp ------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEE
T ss_pred hhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEE
Confidence 34467899999999999999999996 47899999999764332 223456799999998 89999999999
Q ss_pred EEeCCeEEEEEec-CCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEc-CCCcEEE
Q 005224 440 CDEEGEQMLVYEF-MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLD-HKFTAKV 517 (707)
Q Consensus 440 ~~~~~~~~lV~E~-~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~-~~~~~kl 517 (707)
+...+..++|||| +.+++|.+++.... .+++..++.++.|+++||+|||+.+ |+||||||+||+++ +++.+||
T Consensus 107 ~~~~~~~~~v~e~~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~kl 181 (312)
T 2iwi_A 107 FETQEGFMLVLERPLPAQDLFDYITEKG--PLGEGPSRCFFGQVVAAIQHCHSRG---VVHRDIKDENILIDLRRGCAKL 181 (312)
T ss_dssp C-----CEEEEECCSSEEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHHT---EECCCCSGGGEEEETTTTEEEE
T ss_pred EecCCeEEEEEEecCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCChhhEEEeCCCCeEEE
Confidence 9999999999999 78999999997643 5899999999999999999999998 99999999999999 8899999
Q ss_pred eeecccccCCCCCCCCccccceecccccCCCccchhhhccCCCC-CchhhHHHHHHHHHHHcCCCCCCC
Q 005224 518 ADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLT-DKSDVYSLGVVFLELLTGMQPISH 585 (707)
Q Consensus 518 ~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s-~~sDVwS~Gvll~elltG~~pf~~ 585 (707)
+|||+++...... .....|+..|+|||++.+..+. .++|||||||++|||++|+.||..
T Consensus 182 ~dfg~~~~~~~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 241 (312)
T 2iwi_A 182 IDFGSGALLHDEP---------YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFER 241 (312)
T ss_dssp CCCSSCEECCSSC---------BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCS
T ss_pred EEcchhhhcccCc---------ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCC
Confidence 9999998764321 2345689999999999877664 489999999999999999999964
No 244
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=3.8e-38 Score=333.18 Aligned_cols=202 Identities=26% Similarity=0.432 Sum_probs=172.6
Q ss_pred HHHHhcCCCccceEeeeCceEEEEEEe-CCCcEEEEEEeccCChh------hHHHHHHHHHHHHccC--CCcceeEEEEE
Q 005224 370 MALATNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQ------GEKEFLTEIQFLSRLH--HRNLVSLVGYC 440 (707)
Q Consensus 370 l~~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~------~~~~~~~E~~~l~~l~--H~nIv~l~~~~ 440 (707)
.....++|++.+.||+|+||+||+|.. .+++.||||++...... ..+.+.+|+.++++++ |+||+++++++
T Consensus 38 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~ 117 (320)
T 3a99_A 38 KEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWF 117 (320)
T ss_dssp --CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEE
T ss_pred cCCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEE
Confidence 344567899999999999999999996 47899999998753221 2245678999999996 59999999999
Q ss_pred EeCCeEEEEEecCCC-CCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEc-CCCcEEEe
Q 005224 441 DEEGEQMLVYEFMSN-GTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLD-HKFTAKVA 518 (707)
Q Consensus 441 ~~~~~~~lV~E~~~~-gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~-~~~~~kl~ 518 (707)
...+..++||||+.+ ++|.+++... ..+++..++.++.|+++||+|||+.+ |+||||||+|||++ +++.+||+
T Consensus 118 ~~~~~~~lv~e~~~~~~~L~~~l~~~--~~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~~kL~ 192 (320)
T 3a99_A 118 ERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLI 192 (320)
T ss_dssp ECSSEEEEEEECCSSEEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETTTTEEEEC
T ss_pred ecCCcEEEEEEcCCCCccHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCC---cEeCCCCHHHEEEeCCCCCEEEe
Confidence 999999999999976 8999999764 35899999999999999999999999 99999999999999 78999999
Q ss_pred eecccccCCCCCCCCccccceecccccCCCccchhhhccCCC-CCchhhHHHHHHHHHHHcCCCCCCC
Q 005224 519 DFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKL-TDKSDVYSLGVVFLELLTGMQPISH 585 (707)
Q Consensus 519 DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-s~~sDVwS~Gvll~elltG~~pf~~ 585 (707)
|||+++..... ......||+.|+|||++.+..+ +.++|||||||++|||++|+.||..
T Consensus 193 Dfg~~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~ 251 (320)
T 3a99_A 193 DFGSGALLKDT---------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 251 (320)
T ss_dssp CCTTCEECCSS---------CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCS
T ss_pred eCccccccccc---------cccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCC
Confidence 99999876432 1223468999999999987765 6789999999999999999999964
No 245
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=3.8e-37 Score=324.71 Aligned_cols=251 Identities=22% Similarity=0.336 Sum_probs=175.2
Q ss_pred hcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCChh-hH-HHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEE
Q 005224 374 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ-GE-KEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 450 (707)
Q Consensus 374 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~-~~-~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~ 450 (707)
.++|+..+.||+|+||.||+|... +|+.||||++...... .. +.+.++..+++.++||||+++++++...+..++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~ 103 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAM 103 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEE
Confidence 467888999999999999999975 7899999999764332 22 33445556788889999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhC-CCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCC
Q 005224 451 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTE-ADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 529 (707)
Q Consensus 451 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~-~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~ 529 (707)
||+ ++.+..+.... ...+++..++.++.|+++||.|||+. + |+||||||+||+++.++.+||+|||++......
T Consensus 104 e~~-~~~~~~l~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~~---i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~ 178 (318)
T 2dyl_A 104 ELM-GTCAEKLKKRM-QGPIPERILGKMTVAIVKALYYLKEKHG---VIHRDVKPSNILLDERGQIKLCDFGISGRLVDD 178 (318)
T ss_dssp CCC-SEEHHHHHHHH-TSCCCHHHHHHHHHHHHHHHHHHHHHHC---CCCCCCCGGGEEECTTSCEEECCCTTC------
T ss_pred ecc-CCcHHHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHHhhCC---EEeCCCCHHHEEECCCCCEEEEECCCchhccCC
Confidence 999 55666655432 34689999999999999999999985 8 999999999999999999999999999765432
Q ss_pred CCCCccccceecccccCCCccchhhhc-----cCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchh
Q 005224 530 DIEGIVPAHVSTVVKGTPGYLDPEYFL-----THKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFS 604 (707)
Q Consensus 530 ~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~s~~sDVwS~Gvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~ 604 (707)
. ......|++.|+|||++. ...++.++|||||||++|||++|+.||..................
T Consensus 179 ~--------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~--- 247 (318)
T 2dyl_A 179 K--------AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEP--- 247 (318)
T ss_dssp ----------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHHSCC---
T ss_pred c--------cccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHHhccCC---
Confidence 1 223446899999999994 567889999999999999999999999764443322222111100
Q ss_pred hccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005224 605 VIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMR 644 (707)
Q Consensus 605 ~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~ 644 (707)
........++..+.+++.+||+.+|.+||++.++++
T Consensus 248 ----~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (318)
T 2dyl_A 248 ----PLLPGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLE 283 (318)
T ss_dssp ----CCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred ----CCCCccCCCCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 000011123445666666666666666666666554
No 246
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=4.9e-38 Score=334.63 Aligned_cols=191 Identities=24% Similarity=0.279 Sum_probs=161.1
Q ss_pred hcCCCccceEeeeCceEEEEEEeCCCcEEEEEEeccCCh--------hhHHHHHHHHHHHHccC---------CCcceeE
Q 005224 374 TNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSL--------QGEKEFLTEIQFLSRLH---------HRNLVSL 436 (707)
Q Consensus 374 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~--------~~~~~~~~E~~~l~~l~---------H~nIv~l 436 (707)
.++|++.+.||+|+||+||+|+. +|+.||||++..... ...+.+.+|+++++.++ ||||+++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l 97 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL 97 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence 46788899999999999999998 789999999875421 22367889999998885 8888888
Q ss_pred EEEEE------------------------------eCCeEEEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHH
Q 005224 437 VGYCD------------------------------EEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGI 486 (707)
Q Consensus 437 ~~~~~------------------------------~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL 486 (707)
.+.+. ..+..++||||+++|++.+.+.+ ..+++..++.++.||+.||
T Consensus 98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~---~~~~~~~~~~i~~qi~~aL 174 (336)
T 2vuw_A 98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT---KLSSLATAKSILHQLTASL 174 (336)
T ss_dssp EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT---TCCCHHHHHHHHHHHHHHH
T ss_pred cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh---cCCCHHHHHHHHHHHHHHH
Confidence 87653 26789999999999976666633 4589999999999999999
Q ss_pred HHHH-hCCCCCeEecCCCCCCEEEcCCC--------------------cEEEeeecccccCCCCCCCCccccceeccccc
Q 005224 487 LYLH-TEADPPVFHRDIKASNILLDHKF--------------------TAKVADFGLSRLAPVPDIEGIVPAHVSTVVKG 545 (707)
Q Consensus 487 ~yLH-~~~~~~ivH~Dlkp~NILl~~~~--------------------~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~g 545 (707)
+||| +.+ |+||||||+|||++.++ .+||+|||+|+.... ....|
T Consensus 175 ~~lH~~~~---ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~------------~~~~g 239 (336)
T 2vuw_A 175 AVAEASLR---FEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERD------------GIVVF 239 (336)
T ss_dssp HHHHHHHC---CBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEET------------TEEEC
T ss_pred HHHHHhCC---EeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCC------------CcEEE
Confidence 9999 888 99999999999999887 899999999986532 23479
Q ss_pred CCCccchhhhccCCCCCchhhHHHHHH-HHHHHcCCCCCC
Q 005224 546 TPGYLDPEYFLTHKLTDKSDVYSLGVV-FLELLTGMQPIS 584 (707)
Q Consensus 546 t~~y~aPE~~~~~~~s~~sDVwS~Gvl-l~elltG~~pf~ 584 (707)
|+.|+|||++.+.. +.++||||+|++ .+++++|..||.
T Consensus 240 t~~y~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~ 278 (336)
T 2vuw_A 240 CDVSMDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYS 278 (336)
T ss_dssp CCCTTCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHH
T ss_pred eecccChhhhcCCC-ccceehhhhhCCCCcccccccCCCc
Confidence 99999999998776 889999998777 777888988873
No 247
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=1.3e-35 Score=308.53 Aligned_cols=230 Identities=12% Similarity=0.075 Sum_probs=185.8
Q ss_pred hcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCCh---hhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEE
Q 005224 374 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 449 (707)
Q Consensus 374 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV 449 (707)
.++|++.+.||+|+||.||+|... +++.||||++..... ...+.+.+|+.++++++||||+++++++...+..++|
T Consensus 30 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 109 (286)
T 3uqc_A 30 NGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVV 109 (286)
T ss_dssp TTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred cCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEE
Confidence 367999999999999999999975 589999999976433 2346789999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCC
Q 005224 450 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 529 (707)
Q Consensus 450 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~ 529 (707)
|||+++++|.+++... .....+..++.|++.||+|||+++ |+||||||+|||+++++.+||+++|
T Consensus 110 ~e~~~g~~L~~~l~~~----~~~~~~~~i~~ql~~aL~~lH~~g---ivH~Dikp~NIll~~~g~~kl~~~~-------- 174 (286)
T 3uqc_A 110 AEWIRGGSLQEVADTS----PSPVGAIRAMQSLAAAADAAHRAG---VALSIDHPSRVRVSIDGDVVLAYPA-------- 174 (286)
T ss_dssp EECCCEEEHHHHHTTC----CCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEEETTSCEEECSCC--------
T ss_pred EEecCCCCHHHHHhcC----CChHHHHHHHHHHHHHHHHHHHCC---CccCCCCcccEEEcCCCCEEEEecc--------
Confidence 9999999999999532 355578889999999999999999 9999999999999999999998544
Q ss_pred CCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCC
Q 005224 530 DIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGN 609 (707)
Q Consensus 530 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 609 (707)
|++ .++.++|||||||++|||++|+.||........ ...........
T Consensus 175 -------------------~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~-------~~~~~~~~~~~ 221 (286)
T 3uqc_A 175 -------------------TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSG-------LAPAERDTAGQ 221 (286)
T ss_dssp -------------------CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCC-------SEECCBCTTSC
T ss_pred -------------------ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchh-------hHHHHHHhccC
Confidence 333 368899999999999999999999975432100 00000111111
Q ss_pred CC---CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhc
Q 005224 610 MG---SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNM 652 (707)
Q Consensus 610 ~~---~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~ 652 (707)
.. ....+++..+.+++.+||+.+|.+| |+.++++.|+.+...
T Consensus 222 ~~~~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~~ 266 (286)
T 3uqc_A 222 PIEPADIDRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQATAV 266 (286)
T ss_dssp BCCHHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC-
T ss_pred CCChhhcccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhcc
Confidence 11 1123456789999999999999999 999999999987653
No 248
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=2.6e-35 Score=308.22 Aligned_cols=175 Identities=23% Similarity=0.375 Sum_probs=152.9
Q ss_pred cCCCcc-ceEeeeCceEEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHH-HccCCCcceeEEEEEEe----CCeEE
Q 005224 375 NNFNSS-TQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFL-SRLHHRNLVSLVGYCDE----EGEQM 447 (707)
Q Consensus 375 ~~~~~~-~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~E~~~l-~~l~H~nIv~l~~~~~~----~~~~~ 447 (707)
++|.+. +.||+|+||.||+|... +++.||||++... ..+.+|+.++ +..+||||+++++++.. ....+
T Consensus 17 ~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 91 (299)
T 3m2w_A 17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL 91 (299)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred cchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc-----HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEE
Confidence 456666 78999999999999974 7899999998642 3567888888 55699999999999977 66789
Q ss_pred EEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcC---CCcEEEeeecccc
Q 005224 448 LVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDH---KFTAKVADFGLSR 524 (707)
Q Consensus 448 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~---~~~~kl~DFGla~ 524 (707)
+||||+++|+|.+++.......+++..++.++.|++.||+|||+.+ |+||||||+||+++. ++.+||+|||++.
T Consensus 92 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~ 168 (299)
T 3m2w_A 92 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAK 168 (299)
T ss_dssp EEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESSSSTTCCEEECCCTTCE
T ss_pred EEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEecCCCCCcEEEecccccc
Confidence 9999999999999998876667999999999999999999999999 999999999999998 7899999999986
Q ss_pred cCCCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCC
Q 005224 525 LAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 586 (707)
Q Consensus 525 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~elltG~~pf~~~ 586 (707)
... +..++.++|||||||++|||++|+.||...
T Consensus 169 ~~~-----------------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~ 201 (299)
T 3m2w_A 169 ETT-----------------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSN 201 (299)
T ss_dssp ECT-----------------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-
T ss_pred ccc-----------------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCC
Confidence 532 134577999999999999999999999643
No 249
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.5e-35 Score=344.91 Aligned_cols=239 Identities=21% Similarity=0.334 Sum_probs=194.1
Q ss_pred hcCCCccceEeeeCceEEEEEEeC--CCcEEEEEEeccCC-hhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCe-----
Q 005224 374 TNNFNSSTQIGQGGYGKVYKGILP--DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGE----- 445 (707)
Q Consensus 374 ~~~~~~~~~lG~G~~g~Vy~~~~~--~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~----- 445 (707)
.++|++.+.||+|+||+||+|.+. +|+.||||++.... ......+.+|++++++++||||+++++++...+.
T Consensus 79 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~ 158 (681)
T 2pzi_A 79 AGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPV 158 (681)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCce
Confidence 368999999999999999999975 68999999986533 3345678999999999999999999999987665
Q ss_pred EEEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeeccccc
Q 005224 446 QMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRL 525 (707)
Q Consensus 446 ~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~ 525 (707)
.++||||+++++|.+++.. .+++..++.++.||++||.|||+++ |+||||||+|||++.+ .+||+|||+++.
T Consensus 159 ~~lv~E~~~g~~L~~~~~~----~l~~~~~~~~~~qi~~aL~~lH~~g---iiHrDlkp~NIll~~~-~~kl~DFG~a~~ 230 (681)
T 2pzi_A 159 GYIVMEYVGGQSLKRSKGQ----KLPVAEAIAYLLEILPALSYLHSIG---LVYNDLKPENIMLTEE-QLKLIDLGAVSR 230 (681)
T ss_dssp EEEEEECCCCEECC----C----CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECSS-CEEECCCTTCEE
T ss_pred eEEEEEeCCCCcHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHHCC---CeecccChHHeEEeCC-cEEEEecccchh
Confidence 7999999999999988743 5999999999999999999999999 9999999999999986 999999999986
Q ss_pred CCCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhh
Q 005224 526 APVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSV 605 (707)
Q Consensus 526 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~ 605 (707)
.... ....||+.|+|||++.+.. +.++|||||||++|||++|..||.....
T Consensus 231 ~~~~-----------~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~~~----------------- 281 (681)
T 2pzi_A 231 INSF-----------GYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRYV----------------- 281 (681)
T ss_dssp TTCC-----------SCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTEEC-----------------
T ss_pred cccC-----------CccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCccccc-----------------
Confidence 5321 3456899999999998764 8899999999999999999888753110
Q ss_pred ccCCCCC-CChHHHHHHHHHHHHhcccCCCCCCC-HHHHHHHHHHhh
Q 005224 606 IDGNMGS-YPSECVEKFIKLALKCCQDETDARPS-MSEVMRELESIW 650 (707)
Q Consensus 606 ~~~~~~~-~~~~~~~~l~~l~~~c~~~~p~~RPt-~~~v~~~L~~~~ 650 (707)
+..... ........+.+++.+|++.+|.+||+ +.++...+..+.
T Consensus 282 -~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~ 327 (681)
T 2pzi_A 282 -DGLPEDDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGVL 327 (681)
T ss_dssp -SSCCTTCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred -ccccccccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHHH
Confidence 000001 11234567899999999999999995 566666666543
No 250
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=2e-35 Score=323.29 Aligned_cols=240 Identities=15% Similarity=0.133 Sum_probs=180.6
Q ss_pred cCCCccceEeeeCceEEEEEEe-CCCcEEEEEEeccCChh---hHHHHHHHHHHHHccCC-Ccc---------e------
Q 005224 375 NNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQ---GEKEFLTEIQFLSRLHH-RNL---------V------ 434 (707)
Q Consensus 375 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~---~~~~~~~E~~~l~~l~H-~nI---------v------ 434 (707)
.+|...+.||+|+||+||+|.+ .+|+.||||++...... ..+.+.+|+.+++.++| +|. +
T Consensus 78 ~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 157 (413)
T 3dzo_A 78 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLV 157 (413)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEE
T ss_pred eeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhc
Confidence 4566788999999999999995 47999999998743322 24678999999999987 221 1
Q ss_pred ------eEEEEEEe-----CCeEEEEEecCCCCCHHHHHh-----hcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeE
Q 005224 435 ------SLVGYCDE-----EGEQMLVYEFMSNGTLRDQLS-----AKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVF 498 (707)
Q Consensus 435 ------~l~~~~~~-----~~~~~lV~E~~~~gsL~~~l~-----~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iv 498 (707)
.+..++.. ....+++|+++ +++|.+++. ......+++..++.++.|+++||+|||+++ |+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ii 233 (413)
T 3dzo_A 158 KDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG---LV 233 (413)
T ss_dssp ECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTT---EE
T ss_pred ccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCC---cc
Confidence 11111111 22467788876 689999985 223445889999999999999999999999 99
Q ss_pred ecCCCCCCEEEcCCCcEEEeeecccccCCCCCCCCccccceecccccCCCccchhhh----------ccCCCCCchhhHH
Q 005224 499 HRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYF----------LTHKLTDKSDVYS 568 (707)
Q Consensus 499 H~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~----------~~~~~s~~sDVwS 568 (707)
||||||+|||++.++.+||+|||+++.... ......| +.|+|||++ .+..++.++||||
T Consensus 234 HrDiKp~NILl~~~~~~kL~DFG~a~~~~~----------~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwS 302 (413)
T 3dzo_A 234 HTYLRPVDIVLDQRGGVFLTGFEHLVRDGA----------SAVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWT 302 (413)
T ss_dssp CSCCCGGGEEECTTCCEEECCGGGCEETTE----------EECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHH
T ss_pred cCCcccceEEEecCCeEEEEeccceeecCC----------ccccCCC-CceeCchhhhccccccccccCcCCCchhhHHH
Confidence 999999999999999999999999876431 2344567 999999999 5556888999999
Q ss_pred HHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005224 569 LGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMR 644 (707)
Q Consensus 569 ~Gvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~ 644 (707)
|||++|||++|+.||...... .....++. .... .+..+.+++.+||+.+|.+||++.++++
T Consensus 303 lGvil~elltg~~Pf~~~~~~----------~~~~~~~~-~~~~----~~~~~~~li~~~l~~dP~~Rpt~~~~l~ 363 (413)
T 3dzo_A 303 LGLAIYWIWCADLPNTDDAAL----------GGSEWIFR-SCKN----IPQPVRALLEGFLRYPKEDRLLPLQAME 363 (413)
T ss_dssp HHHHHHHHHHSSCCCCTTGGG----------SCSGGGGS-SCCC----CCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred HHHHHHHHHHCCCCCCCcchh----------hhHHHHHh-hccc----CCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 999999999999999754321 11111111 1122 3367889999999999999999777643
No 251
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.95 E-value=1.2e-29 Score=287.54 Aligned_cols=185 Identities=18% Similarity=0.115 Sum_probs=130.6
Q ss_pred eEeeeCceEEEEEE-eCCCcEEEEEEeccCC----------hhhHHHHHHHHHHHHcc-CCCcceeEEEEEEeCCeEEEE
Q 005224 382 QIGQGGYGKVYKGI-LPDGTVVAVKRAQEGS----------LQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQMLV 449 (707)
Q Consensus 382 ~lG~G~~g~Vy~~~-~~~~~~vavK~l~~~~----------~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lV 449 (707)
..+.|++|.+..++ .-.|+.||||++.... ....++|.+|+++|+++ .|+||+++++++++++..|||
T Consensus 241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLV 320 (569)
T 4azs_A 241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLV 320 (569)
T ss_dssp C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEE
T ss_pred ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEE
Confidence 35567777666655 3358899999986532 12235799999999999 799999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCC
Q 005224 450 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 529 (707)
Q Consensus 450 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~ 529 (707)
|||++|++|.++|.+.+ +++.. +|+.||+.||+|+|+++ ||||||||+|||+++++++||+|||+|+.....
T Consensus 321 MEyv~G~~L~d~i~~~~--~l~~~---~I~~QIl~AL~ylH~~G---IIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~ 392 (569)
T 4azs_A 321 MEKLPGRLLSDMLAAGE--EIDRE---KILGSLLRSLAALEKQG---FWHDDVRPWNVMVDARQHARLIDFGSIVTTPQD 392 (569)
T ss_dssp EECCCSEEHHHHHHTTC--CCCHH---HHHHHHHHHHHHHHHTT---CEESCCCGGGEEECTTSCEEECCCTTEESCC--
T ss_pred EecCCCCcHHHHHHhCC--CCCHH---HHHHHHHHHHHHHHHCC---ceeccCchHhEEECCCCCEEEeecccCeeCCCC
Confidence 99999999999997643 46654 58899999999999999 999999999999999999999999999876432
Q ss_pred CCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCC
Q 005224 530 DIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQP 582 (707)
Q Consensus 530 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~elltG~~p 582 (707)
.......+||++|||||++.+. +..++|+||+|++++++.++..+
T Consensus 393 -------~~~~~t~vGTp~YmAPE~l~g~-~~~~~d~~s~g~~~~~l~~~~~~ 437 (569)
T 4azs_A 393 -------CSWPTNLVQSFFVFVNELFAEN-KSWNGFWRSAPVHPFNLPQPWSN 437 (569)
T ss_dssp --------CCSHHHHHHHHHHHHHHC------------------CCCCTTHHH
T ss_pred -------CccccCceechhhccHHHhCCC-CCCcccccccccchhhhccccch
Confidence 1233456799999999999764 56789999999998887665443
No 252
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.93 E-value=8.3e-27 Score=262.69 Aligned_cols=190 Identities=14% Similarity=0.187 Sum_probs=146.0
Q ss_pred CccceEeeeCceEEEEEEeCCCcEEEEEEeccCChh--------hHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEE
Q 005224 378 NSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQ--------GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 449 (707)
Q Consensus 378 ~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~--------~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV 449 (707)
...+.||+|+||+||+|.. .++.+++|+....... ..+++.+|++++++++||||+++..++...+..++|
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lV 417 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIM 417 (540)
T ss_dssp ---------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEE
T ss_pred CCCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEE
Confidence 4467899999999999955 5788889876542211 134589999999999999999666666677788999
Q ss_pred EecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCC
Q 005224 450 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 529 (707)
Q Consensus 450 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~ 529 (707)
|||+++++|.+++.. +..++.|+++||+|||+++ |+||||||+|||+++ .+||+|||+++.....
T Consensus 418 mE~~~ggsL~~~l~~----------~~~i~~qi~~aL~~LH~~g---IiHrDiKp~NILl~~--~~kL~DFGla~~~~~~ 482 (540)
T 3en9_A 418 MSYINGKLAKDVIED----------NLDIAYKIGEIVGKLHKND---VIHNDLTTSNFIFDK--DLYIIDFGLGKISNLD 482 (540)
T ss_dssp EECCCSEEHHHHSTT----------CTHHHHHHHHHHHHHHHTT---EECTTCCTTSEEESS--SEEECCCTTCEECCCH
T ss_pred EECCCCCCHHHHHHH----------HHHHHHHHHHHHHHHHHCc---CccCCCCHHHEEECC--eEEEEECccCEECCCc
Confidence 999999999999954 5689999999999999999 999999999999999 9999999999876432
Q ss_pred CCCCccccceecccccCCCccchhhhcc--CCCCCchhhHHHHHHHHHHHcCCCCC
Q 005224 530 DIEGIVPAHVSTVVKGTPGYLDPEYFLT--HKLTDKSDVYSLGVVFLELLTGMQPI 583 (707)
Q Consensus 530 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~s~~sDVwS~Gvll~elltG~~pf 583 (707)
...............||+.|+|||++.. ..|+..+|+|+..+-..+-+.++.+|
T Consensus 483 ~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY 538 (540)
T 3en9_A 483 EDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY 538 (540)
T ss_dssp HHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred cccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence 1000000001235679999999999987 67888899999999999988877666
No 253
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.89 E-value=2e-23 Score=215.65 Aligned_cols=153 Identities=12% Similarity=0.051 Sum_probs=122.8
Q ss_pred HHHHHHHhcCCCccceEeeeCceEEEEEEeCCCcEEEEEEeccCCh------------------hhHHHHHHHHHHHHcc
Q 005224 367 YGEMALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSL------------------QGEKEFLTEIQFLSRL 428 (707)
Q Consensus 367 ~~~l~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~------------------~~~~~~~~E~~~l~~l 428 (707)
...+......|...+.||+|+||.||+|...+|+.||||++..... .....+.+|+++++++
T Consensus 82 l~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l 161 (282)
T 1zar_A 82 LHRLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKL 161 (282)
T ss_dssp HHHHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhc
Confidence 3445555667778899999999999999997899999999864321 1345689999999999
Q ss_pred CCCcceeEEEEEEeCCeEEEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEE
Q 005224 429 HHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNIL 508 (707)
Q Consensus 429 ~H~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NIL 508 (707)
+| +++.+++.. +..++||||+++++|.+ +.. .....++.|+++||.|||+.+ |+||||||+|||
T Consensus 162 ~~---~~v~~~~~~-~~~~lvmE~~~g~~L~~-l~~--------~~~~~i~~qi~~~l~~lH~~g---iiHrDlkp~NIL 225 (282)
T 1zar_A 162 QG---LAVPKVYAW-EGNAVLMELIDAKELYR-VRV--------ENPDEVLDMILEEVAKFYHRG---IVHGDLSQYNVL 225 (282)
T ss_dssp TT---SSSCCEEEE-ETTEEEEECCCCEEGGG-CCC--------SCHHHHHHHHHHHHHHHHHTT---EECSCCSTTSEE
T ss_pred cC---CCcCeEEec-cceEEEEEecCCCcHHH-cch--------hhHHHHHHHHHHHHHHHHHCC---CEeCCCCHHHEE
Confidence 94 555555543 45699999999999988 421 124579999999999999999 999999999999
Q ss_pred EcCCCcEEEeeecccccCCCCCCCCccccceecccccCCCccchhhhc
Q 005224 509 LDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFL 556 (707)
Q Consensus 509 l~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 556 (707)
++ ++.+||+|||+|+. +..|+|||++.
T Consensus 226 l~-~~~vkl~DFG~a~~--------------------~~~~~a~e~l~ 252 (282)
T 1zar_A 226 VS-EEGIWIIDFPQSVE--------------------VGEEGWREILE 252 (282)
T ss_dssp EE-TTEEEECCCTTCEE--------------------TTSTTHHHHHH
T ss_pred EE-CCcEEEEECCCCeE--------------------CCCCCHHHHHH
Confidence 99 99999999999864 33578999885
No 254
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.79 E-value=4.4e-19 Score=176.28 Aligned_cols=142 Identities=25% Similarity=0.339 Sum_probs=124.9
Q ss_pred CCceEEEeeCCcCCCCCC-CcCCCCcccEEeccCCcCcccCCCccccc-CccEEEccCccCCCCCCcccCCCcccceEec
Q 005224 2 SKLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQLNGSIPPGRLSL-NITTIKLSNNKLTGTIPSNFSGLPRLQRLFI 79 (707)
Q Consensus 2 ~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 79 (707)
++|+.|+|++|+|+++++ .|..+++|++|+|++|+|++..|..+..+ +|++|+|++|+|+...+..|.++++|+.|+|
T Consensus 32 ~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L 111 (220)
T 2v9t_B 32 ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLL 111 (220)
T ss_dssp TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEEC
Confidence 478999999999999888 79999999999999999995446666555 8999999999999666666899999999999
Q ss_pred cCcccccCCCCCccccccCCCCccceEEccCccCCCCCCC-C-CCCCCceeeccCCCccccCCcccccCCC
Q 005224 80 ANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGS-F-NIPPNVTVRLRGNPFCLNTNAEQFCGSH 148 (707)
Q Consensus 80 s~N~l~g~~p~~~~~l~~L~~~~L~~l~l~~N~l~~~~~~-~-~~~~l~~l~l~~N~~~~~~~~~~~~~~~ 148 (707)
++|+|++..|..+..+++|+ .|+|++|+|+++++. + .+++|+.|+|++|+|.|+|.+..+-.|.
T Consensus 112 ~~N~l~~~~~~~~~~l~~L~-----~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~l~~l~~~l 177 (220)
T 2v9t_B 112 NANKINCLRVDAFQDLHNLN-----LLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDCHLKWLADYL 177 (220)
T ss_dssp CSSCCCCCCTTTTTTCTTCC-----EEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEECSGGGHHHHHHH
T ss_pred CCCCCCEeCHHHcCCCCCCC-----EEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCCCCccHHHHHHH
Confidence 99999988788888877666 999999999999875 4 7899999999999999999988776554
No 255
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.78 E-value=3.6e-19 Score=181.42 Aligned_cols=137 Identities=19% Similarity=0.100 Sum_probs=107.7
Q ss_pred CCCccceEeeeCceEEEEEEe-CCCcE--EEEEEeccCChh------------------------hHHHHHHHHHHHHcc
Q 005224 376 NFNSSTQIGQGGYGKVYKGIL-PDGTV--VAVKRAQEGSLQ------------------------GEKEFLTEIQFLSRL 428 (707)
Q Consensus 376 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~--vavK~l~~~~~~------------------------~~~~~~~E~~~l~~l 428 (707)
-|++.+.||+|+||.||+|.. .+|+. ||||++...... ....+.+|+.+++.+
T Consensus 48 ~~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l 127 (258)
T 1zth_A 48 ITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERA 127 (258)
T ss_dssp EEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHH
T ss_pred chhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHH
Confidence 356788999999999999997 68999 999987543111 123678999999999
Q ss_pred CCCcc--eeEEEEEEeCCeEEEEEecCCC-C----CHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHH-hCCCCCeEec
Q 005224 429 HHRNL--VSLVGYCDEEGEQMLVYEFMSN-G----TLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLH-TEADPPVFHR 500 (707)
Q Consensus 429 ~H~nI--v~l~~~~~~~~~~~lV~E~~~~-g----sL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH-~~~~~~ivH~ 500 (707)
+|+++ ..++++ +..++||||+.+ | +|.++... .++..+..++.|++.||.||| +.+ |+||
T Consensus 128 ~~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~-----~~~~~~~~i~~qi~~~l~~lH~~~g---ivHr 195 (258)
T 1zth_A 128 KEAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE-----LKELDVEGIFNDVVENVKRLYQEAE---LVHA 195 (258)
T ss_dssp HHTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG-----GGGSCHHHHHHHHHHHHHHHHHTSC---EECS
T ss_pred HhCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc-----cChHHHHHHHHHHHHHHHHHHHHCC---EEeC
Confidence 88754 444442 356899999942 3 77776532 234457789999999999999 888 9999
Q ss_pred CCCCCCEEEcCCCcEEEeeecccccC
Q 005224 501 DIKASNILLDHKFTAKVADFGLSRLA 526 (707)
Q Consensus 501 Dlkp~NILl~~~~~~kl~DFGla~~~ 526 (707)
||||+|||+++ .++|+|||+|...
T Consensus 196 Dlkp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 196 DLSEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp SCSTTSEEESS--SEEECCCTTCEET
T ss_pred CCCHHHEEEcC--cEEEEECcccccC
Confidence 99999999998 9999999999754
No 256
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.78 E-value=1.7e-18 Score=173.18 Aligned_cols=139 Identities=27% Similarity=0.354 Sum_probs=122.6
Q ss_pred CCceEEEeeCCcCCCCCC-CcCCCCcccEEeccCCcCcccCCCcccc-c-CccEEEccCccCCCCCCcccCCCcccceEe
Q 005224 2 SKLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQLNGSIPPGRLS-L-NITTIKLSNNKLTGTIPSNFSGLPRLQRLF 78 (707)
Q Consensus 2 ~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~g~ip~~~~~-~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 78 (707)
++|+.|+|++|+|+++++ .|..+++|++|+|++|+|+ .+|...+. + +|+.|+|++|+|++..+..|..+++|+.|+
T Consensus 40 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~-~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~ 118 (229)
T 3e6j_A 40 TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLG-ALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELF 118 (229)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCC-CcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEe
Confidence 579999999999999987 6999999999999999998 88877654 3 899999999999977777789999999999
Q ss_pred ccCcccccCCCCCccccccCCCCccceEEccCccCCCCCCCC--CCCCCceeeccCCCccccCC-cccccCC
Q 005224 79 IANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSF--NIPPNVTVRLRGNPFCLNTN-AEQFCGS 147 (707)
Q Consensus 79 ls~N~l~g~~p~~~~~l~~L~~~~L~~l~l~~N~l~~~~~~~--~~~~l~~l~l~~N~~~~~~~-~~~~~~~ 147 (707)
|++|+|+ .+|..+..+++|+ .|+|++|+|+.+++.. .+++|+.|++.+|||.|+|. +..+-.|
T Consensus 119 Ls~N~l~-~lp~~~~~l~~L~-----~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~~~~l~~~ 184 (229)
T 3e6j_A 119 MCCNKLT-ELPRGIERLTHLT-----HLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCECRDIMYLRNW 184 (229)
T ss_dssp CCSSCCC-SCCTTGGGCTTCS-----EEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTBGGGHHHHHH
T ss_pred ccCCccc-ccCcccccCCCCC-----EEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCCcchhHHHHHH
Confidence 9999999 9999998777665 9999999999998753 78999999999999999996 4444333
No 257
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.77 E-value=8.1e-19 Score=174.34 Aligned_cols=142 Identities=21% Similarity=0.308 Sum_probs=124.4
Q ss_pred CCceEEEeeCCcCCCCCC--CcCCCCcccEEeccCCcCcccCCCc-cccc-CccEEEccCccCCCCCCcccCCCcccceE
Q 005224 2 SKLLKLSLRNCSLQGPMP--DLSRIPNLGYLDLSSNQLNGSIPPG-RLSL-NITTIKLSNNKLTGTIPSNFSGLPRLQRL 77 (707)
Q Consensus 2 ~~L~~L~L~~N~l~~~~~--~~~~l~~L~~L~Ls~N~l~g~ip~~-~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 77 (707)
..++.|+|++|+|+++++ .|..+++|++|+|++|+|+ .++.. +..+ +|+.|+|++|+|++..|..|.++++|++|
T Consensus 32 ~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~-~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 110 (220)
T 2v70_A 32 QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKIT-DIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTL 110 (220)
T ss_dssp TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCC-EECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEE
T ss_pred CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCC-EECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEE
Confidence 357899999999999865 3899999999999999999 66664 4444 89999999999998888889999999999
Q ss_pred eccCcccccCCCCCccccccCCCCccceEEccCccCCCCCC-CC-CCCCCceeeccCCCccccCCcccccCCCC
Q 005224 78 FIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISG-SF-NIPPNVTVRLRGNPFCLNTNAEQFCGSHS 149 (707)
Q Consensus 78 ~ls~N~l~g~~p~~~~~l~~L~~~~L~~l~l~~N~l~~~~~-~~-~~~~l~~l~l~~N~~~~~~~~~~~~~~~~ 149 (707)
+|++|+|++..|..+..+++|+ .|+|++|+|+++++ .+ .+++|+.|++++|+|.|+|.+..+-.|..
T Consensus 111 ~Ls~N~l~~~~~~~~~~l~~L~-----~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~l~~~~~ 179 (220)
T 2v70_A 111 MLRSNRITCVGNDSFIGLSSVR-----LLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCYLAWLGEWLR 179 (220)
T ss_dssp ECTTSCCCCBCTTSSTTCTTCS-----EEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGGGHHHHHHHH
T ss_pred ECCCCcCCeECHhHcCCCccCC-----EEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCchHHHHHHHH
Confidence 9999999988888888776665 99999999999954 45 79999999999999999999888766653
No 258
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.76 E-value=1.9e-18 Score=179.30 Aligned_cols=144 Identities=30% Similarity=0.379 Sum_probs=118.3
Q ss_pred CCCceEEEeeCCcCCCCCCCcCCCCcccEEeccCCcCcccCCCccc-cc-CccEEEccCccCCCCCCcccCCCcccceEe
Q 005224 1 MSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRL-SL-NITTIKLSNNKLTGTIPSNFSGLPRLQRLF 78 (707)
Q Consensus 1 L~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~ip~~~~-~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 78 (707)
+++|+.|+|++|+|+.++..+..+++|++|+|++|+|+ .+|...+ .+ +|+.|+|++|+|++..+..|..+++|+.|+
T Consensus 76 l~~L~~L~Ls~N~l~~l~~~~~~l~~L~~L~l~~N~l~-~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 154 (290)
T 1p9a_G 76 LPVLGTLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLT-SLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLS 154 (290)
T ss_dssp CTTCCEEECCSSCCSSCCCCTTTCTTCCEEECCSSCCC-CCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCcCCEEECCCCcCCcCchhhccCCCCCEEECCCCcCc-ccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEE
Confidence 46788888888888876667888999999999999999 7776544 34 899999999999977777788899999999
Q ss_pred ccCcccccCCCC-CccccccCCCCccceEEccCccCCCCCCCC-CCCCCceeeccCCCccccCCcccccCCCCCC
Q 005224 79 IANNSLSGSIPS-SIWQSRTLNATETFILDFQNNNLTNISGSF-NIPPNVTVRLRGNPFCLNTNAEQFCGSHSDD 151 (707)
Q Consensus 79 ls~N~l~g~~p~-~~~~l~~L~~~~L~~l~l~~N~l~~~~~~~-~~~~l~~l~l~~N~~~~~~~~~~~~~~~~~~ 151 (707)
|++|+|+ .+|. .+..+++|+ .|+|++|+|+.+|..+ ..++++.++|.+|||.|+|.+..+-.|...+
T Consensus 155 L~~N~l~-~l~~~~~~~l~~L~-----~L~L~~N~l~~ip~~~~~~~~L~~l~L~~Np~~C~c~~~~l~~wl~~~ 223 (290)
T 1p9a_G 155 LANNNLT-ELPAGLLNGLENLD-----TLLLQENSLYTIPKGFFGSHLLPFAFLHGNPWLCNCEILYFRRWLQDN 223 (290)
T ss_dssp CTTSCCS-CCCTTTTTTCTTCC-----EEECCSSCCCCCCTTTTTTCCCSEEECCSCCBCCSGGGHHHHHHHHHT
T ss_pred CCCCcCC-ccCHHHhcCcCCCC-----EEECCCCcCCccChhhcccccCCeEEeCCCCccCcCccHHHHHHHHhC
Confidence 9999998 5554 445555554 9999999999998877 7889999999999999999988877776543
No 259
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.75 E-value=4.4e-18 Score=172.64 Aligned_cols=143 Identities=25% Similarity=0.334 Sum_probs=111.3
Q ss_pred CCCceEEEeeCCcCCCCCC-CcCCCCcccEEeccCCcCcccCCCcccc-c-CccEEEccCccCCCCCCcccCCCcccceE
Q 005224 1 MSKLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQLNGSIPPGRLS-L-NITTIKLSNNKLTGTIPSNFSGLPRLQRL 77 (707)
Q Consensus 1 L~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~g~ip~~~~~-~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 77 (707)
+++|++|+|++|+|+++++ .|..+++|++|+|++|+|+ .+|...+. + +|+.|+|++|+|++..+..|.++++|+.|
T Consensus 58 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 136 (251)
T 3m19_A 58 LTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLA-SLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKEL 136 (251)
T ss_dssp CTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCC-CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred cccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCccc-ccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEE
Confidence 4678888888888888777 4788888888888888888 66655443 3 78888888888886666667888888888
Q ss_pred eccCcccccCCCCCccccccCCCCccceEEccCccCCCCCCC-C-CCCCCceeeccCCCcccc-CCcccccCCCC
Q 005224 78 FIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGS-F-NIPPNVTVRLRGNPFCLN-TNAEQFCGSHS 149 (707)
Q Consensus 78 ~ls~N~l~g~~p~~~~~l~~L~~~~L~~l~l~~N~l~~~~~~-~-~~~~l~~l~l~~N~~~~~-~~~~~~~~~~~ 149 (707)
+|++|+|++..+..+..+++|+ +|+|++|+|+++++. + .+++|+.|++++|+|.|+ |.+..+-.|..
T Consensus 137 ~Ls~N~l~~~~~~~~~~l~~L~-----~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~~~~l~~~~~ 206 (251)
T 3m19_A 137 RLNTNQLQSIPAGAFDKLTNLQ-----TLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCSRCEILYLSQWIR 206 (251)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCC-----EEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTTSTTHHHHHHHHH
T ss_pred ECcCCcCCccCHHHcCcCcCCC-----EEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCCccccHHHHHHHH
Confidence 8888888855555676665555 999999999998774 3 788999999999999998 87777766654
No 260
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.74 E-value=5.7e-18 Score=164.56 Aligned_cols=137 Identities=20% Similarity=0.304 Sum_probs=121.5
Q ss_pred eEEEeeCCcCCCCCCCcCCCCcccEEeccCCcCcccCCCccccc-CccEEEccCccCCCCCCcccCCCcccceEeccCcc
Q 005224 5 LKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSL-NITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNS 83 (707)
Q Consensus 5 ~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~ 83 (707)
+.+++++|+|+.++..+. ++|++|+|++|+|+ .+|..+..+ +|+.|+|++|+|++..+..|.++++|++|+|++|+
T Consensus 13 ~~l~~~~~~l~~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~ 89 (193)
T 2wfh_A 13 TVVRCSNKGLKVLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 89 (193)
T ss_dssp TEEECTTSCCSSCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred CEEEcCCCCCCcCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCc
Confidence 578999999998776654 68999999999999 999766665 89999999999998888899999999999999999
Q ss_pred cccCCCCCccccccCCCCccceEEccCccCCCCCCC-C-CCCCCceeeccCCCccccCCcccccCCCC
Q 005224 84 LSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGS-F-NIPPNVTVRLRGNPFCLNTNAEQFCGSHS 149 (707)
Q Consensus 84 l~g~~p~~~~~l~~L~~~~L~~l~l~~N~l~~~~~~-~-~~~~l~~l~l~~N~~~~~~~~~~~~~~~~ 149 (707)
|++..|..+..+++|+ .|+|++|+|+.+++. + .+++|+.|+|++|||.|+|.+..|-.|..
T Consensus 90 l~~i~~~~f~~l~~L~-----~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~c~l~~l~~~~~ 152 (193)
T 2wfh_A 90 LRCIPPRTFDGLKSLR-----LLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCNMQWLSDWVK 152 (193)
T ss_dssp CCBCCTTTTTTCTTCC-----EEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECSGGGHHHHHHHH
T ss_pred cCEeCHHHhCCCCCCC-----EEECCCCCCCeeChhhhhcCccccEEEeCCCCeecCCcCHHHHHHHH
Confidence 9977777888776665 999999999999886 4 79999999999999999999988877653
No 261
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.72 E-value=5.6e-17 Score=159.40 Aligned_cols=133 Identities=23% Similarity=0.308 Sum_probs=116.7
Q ss_pred CCceEEEeeCCcCCCCCC-CcCCCCcccEEeccCCcCcccCCCcccc-c-CccEEEccCccCCCCCCcccCCCcccceEe
Q 005224 2 SKLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQLNGSIPPGRLS-L-NITTIKLSNNKLTGTIPSNFSGLPRLQRLF 78 (707)
Q Consensus 2 ~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~g~ip~~~~~-~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 78 (707)
++|++|+|++|+|+++++ .|..+++|++|+|++|+|+ .+|...+. + +|++|+|++|+|++..+..|.++++|++|+
T Consensus 28 ~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 106 (208)
T 2o6s_A 28 AQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQ-SLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELA 106 (208)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccC-ccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEE
Confidence 579999999999998887 5899999999999999999 78876543 4 899999999999977777789999999999
Q ss_pred ccCcccccCCCCCccccccCCCCccceEEccCccCCCCCCCC--CCCCCceeeccCCCccccCC
Q 005224 79 IANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSF--NIPPNVTVRLRGNPFCLNTN 140 (707)
Q Consensus 79 ls~N~l~g~~p~~~~~l~~L~~~~L~~l~l~~N~l~~~~~~~--~~~~l~~l~l~~N~~~~~~~ 140 (707)
|++|+|++..+..+..+++|+ .|+|++|+|+++++.. .+++|+.|++++|+|.|+|.
T Consensus 107 L~~N~l~~~~~~~~~~l~~L~-----~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 165 (208)
T 2o6s_A 107 LNTNQLQSLPDGVFDKLTQLK-----DLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP 165 (208)
T ss_dssp CCSSCCCCCCTTTTTTCTTCC-----EEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCCCTT
T ss_pred cCCCcCcccCHhHhccCCcCC-----EEECCCCccceeCHHHhccCCCccEEEecCCCeecCCC
Confidence 999999965555577766665 9999999999998863 78999999999999998875
No 262
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.72 E-value=2.2e-17 Score=160.24 Aligned_cols=136 Identities=23% Similarity=0.331 Sum_probs=117.6
Q ss_pred eEEEeeCCcCCCCCCCcCCCCcccEEeccCCcCcccCCC-c-cccc-CccEEEccCccCCCCCCcccCCCcccceEeccC
Q 005224 5 LKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPP-G-RLSL-NITTIKLSNNKLTGTIPSNFSGLPRLQRLFIAN 81 (707)
Q Consensus 5 ~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~ip~-~-~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~ 81 (707)
+.|++++|+|+.++..+.. +|++|+|++|+|+ .++. . +..+ +|+.|+|++|+|++..|..|.++++|++|+|++
T Consensus 11 ~~l~~s~~~l~~ip~~~~~--~l~~L~l~~n~i~-~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLKEIPRDIPL--HTTELLLNDNELG-RISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCSSCCSCCCT--TCSEEECCSCCCC-SBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcCcCccCCCC--CCCEEECCCCcCC-ccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 6899999999877766654 8999999999999 6665 3 3344 899999999999998899999999999999999
Q ss_pred cccccCCCCCccccccCCCCccceEEccCccCCCCCC-CC-CCCCCceeeccCCCccccCCcccccCCC
Q 005224 82 NSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISG-SF-NIPPNVTVRLRGNPFCLNTNAEQFCGSH 148 (707)
Q Consensus 82 N~l~g~~p~~~~~l~~L~~~~L~~l~l~~N~l~~~~~-~~-~~~~l~~l~l~~N~~~~~~~~~~~~~~~ 148 (707)
|+|++..|..+..+++|+ +|+|++|+|+++++ .+ .+++|+.|+|++|+|.|+|.+..+-.|.
T Consensus 88 N~l~~~~~~~~~~l~~L~-----~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~~~~~l 151 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLK-----TLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWL 151 (192)
T ss_dssp CCCCEECSSSSTTCTTCC-----EEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHHHHHHH
T ss_pred CcCCccCHHHhcCCCCCC-----EEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcchHHHHHH
Confidence 999988887788776665 99999999999855 44 7899999999999999999987776554
No 263
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.71 E-value=7e-17 Score=165.61 Aligned_cols=132 Identities=27% Similarity=0.330 Sum_probs=70.1
Q ss_pred CceEEEeeCCcCCCCCC-CcCCCCcccEEeccCCcCcccCCCccc-cc-CccEEEccCccCCCCCCcccCCCcccceEec
Q 005224 3 KLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQLNGSIPPGRL-SL-NITTIKLSNNKLTGTIPSNFSGLPRLQRLFI 79 (707)
Q Consensus 3 ~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~g~ip~~~~-~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 79 (707)
+|++|+|++|+|+++++ .|..+++|++|+|++|+|+ .+|...+ .+ +|+.|+|++|+|++..+..|..+++|+.|+|
T Consensus 86 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 164 (270)
T 2o6q_A 86 NLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLK-SLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRL 164 (270)
T ss_dssp TCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccC-eeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEe
Confidence 34444444444444333 2344444444444444444 3333222 12 4555555555555333333555555555555
Q ss_pred cCcccccCCCCCccccccCCCCccceEEccCccCCCCCCCC--CCCCCceeeccCCCccccCC
Q 005224 80 ANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSF--NIPPNVTVRLRGNPFCLNTN 140 (707)
Q Consensus 80 s~N~l~g~~p~~~~~l~~L~~~~L~~l~l~~N~l~~~~~~~--~~~~l~~l~l~~N~~~~~~~ 140 (707)
++|++++..+..+..++ +|+.|+|++|+|+++++.. .+++|+.|++++|||.|+|.
T Consensus 165 ~~n~l~~~~~~~~~~l~-----~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 222 (270)
T 2o6q_A 165 YNNQLKRVPEGAFDKLT-----ELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCTCN 222 (270)
T ss_dssp CSSCCSCCCTTTTTTCT-----TCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCSSS
T ss_pred cCCcCcEeChhHhccCC-----CcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeCCCc
Confidence 55555533333344433 3447888888888776653 57778888888888888876
No 264
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.71 E-value=7.3e-17 Score=165.69 Aligned_cols=134 Identities=25% Similarity=0.302 Sum_probs=87.1
Q ss_pred CCCceEEEeeCCcCCCCCC-CcCCCCcccEEeccCCcCcccCCCcc-ccc-CccEEEccCccCCCCCCcccCCCcccceE
Q 005224 1 MSKLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQLNGSIPPGR-LSL-NITTIKLSNNKLTGTIPSNFSGLPRLQRL 77 (707)
Q Consensus 1 L~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~g~ip~~~-~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 77 (707)
+++|++|+|++|+|+++++ .|..+++|++|+|++|+++ .+|... ..+ +|++|+|++|+|++..+..|.++++|+.|
T Consensus 84 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 162 (272)
T 3rfs_A 84 LTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQ-SLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTEL 162 (272)
T ss_dssp CTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCC-CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred CCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCC-ccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEE
Confidence 3566677777777776666 3666777777777777777 454443 223 67777777777775555556677777777
Q ss_pred eccCcccccCCCCCccccccCCCCccceEEccCccCCCCCCCC--CCCCCceeeccCCCccccCC
Q 005224 78 FIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSF--NIPPNVTVRLRGNPFCLNTN 140 (707)
Q Consensus 78 ~ls~N~l~g~~p~~~~~l~~L~~~~L~~l~l~~N~l~~~~~~~--~~~~l~~l~l~~N~~~~~~~ 140 (707)
+|++|++++..+..+..+++|+ .|+|++|+|+++++.. .+++|+.|++++|+|.|.|.
T Consensus 163 ~l~~n~l~~~~~~~~~~l~~L~-----~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 222 (272)
T 3rfs_A 163 DLSYNQLQSLPEGVFDKLTQLK-----DLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP 222 (272)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCC-----EEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred ECCCCCcCccCHHHhcCCccCC-----EEECCCCcCCccCHHHHhCCcCCCEEEccCCCccccCc
Confidence 7777777754444455544444 7777777777776543 56777777777777776664
No 265
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.69 E-value=3.1e-17 Score=169.55 Aligned_cols=142 Identities=26% Similarity=0.419 Sum_probs=106.7
Q ss_pred CCCceEEEeeCCcCCCCCC-CcCCCCcccEEeccCCcCcccCCCccc-cc-CccEEEccCccCCCCCCcccCCCcccceE
Q 005224 1 MSKLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQLNGSIPPGRL-SL-NITTIKLSNNKLTGTIPSNFSGLPRLQRL 77 (707)
Q Consensus 1 L~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~g~ip~~~~-~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 77 (707)
+++|++|+|++|++++.++ .|.++++|++|+|++|+++ .+|...+ .+ +|+.|+|++|+|++..+..|.++++|+.|
T Consensus 104 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 182 (285)
T 1ozn_A 104 LGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQ-ALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRL 182 (285)
T ss_dssp CTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEE
T ss_pred CcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCccc-ccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEE
Confidence 3567777777777777665 4677777777777777777 5555433 33 67788888887775555567777888888
Q ss_pred eccCcccccCCCCCccccccCCCCccceEEccCccCCCCCCC-C-CCCCCceeeccCCCccccCCcccccCCC
Q 005224 78 FIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGS-F-NIPPNVTVRLRGNPFCLNTNAEQFCGSH 148 (707)
Q Consensus 78 ~ls~N~l~g~~p~~~~~l~~L~~~~L~~l~l~~N~l~~~~~~-~-~~~~l~~l~l~~N~~~~~~~~~~~~~~~ 148 (707)
+|++|++++..|..+..+++|+ .|+|++|+|+++++. + .+++|+.|++++|+|.|+|....+..|.
T Consensus 183 ~l~~n~l~~~~~~~~~~l~~L~-----~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~~~~~~~l 250 (285)
T 1ozn_A 183 LLHQNRVAHVHPHAFRDLGRLM-----TLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRARPLWAWL 250 (285)
T ss_dssp ECCSSCCCEECTTTTTTCTTCC-----EEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGGGHHHHHHH
T ss_pred ECCCCcccccCHhHccCccccc-----EeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCCcHHHHHHH
Confidence 8888888776677777665554 999999999998765 3 7899999999999999999987766654
No 266
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.68 E-value=1e-16 Score=177.07 Aligned_cols=142 Identities=18% Similarity=0.210 Sum_probs=125.0
Q ss_pred CCceEEEeeCCcCCCCCC-CcCCCCcccEEeccCCcCcccCCCccccc-CccEEEccCccCCCCCCcccCCCcccceEec
Q 005224 2 SKLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQLNGSIPPGRLSL-NITTIKLSNNKLTGTIPSNFSGLPRLQRLFI 79 (707)
Q Consensus 2 ~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 79 (707)
++|+.|+|++|++++.+| .|..+++|++|+|++|++++..|..+..+ +|+.|+|++|+|++..|..|.++++|++|+|
T Consensus 275 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 354 (455)
T 3v47_A 275 SGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDL 354 (455)
T ss_dssp SCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEEC
T ss_pred cCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEEC
Confidence 479999999999999888 69999999999999999995555566555 8999999999999888999999999999999
Q ss_pred cCcccccCCCCCccccccCCCCccceEEccCccCCCCCCCC--CCCCCceeeccCCCccccCC-cccccCCC
Q 005224 80 ANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSF--NIPPNVTVRLRGNPFCLNTN-AEQFCGSH 148 (707)
Q Consensus 80 s~N~l~g~~p~~~~~l~~L~~~~L~~l~l~~N~l~~~~~~~--~~~~l~~l~l~~N~~~~~~~-~~~~~~~~ 148 (707)
++|++++..|..+..+++|+ +|+|++|+|+++++.. .+++|+.|++++|+|.|+|. ...+-.|.
T Consensus 355 s~N~l~~~~~~~~~~l~~L~-----~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~l~~~l 421 (455)
T 3v47_A 355 SYNHIRALGDQSFLGLPNLK-----ELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRIDYLSRWL 421 (455)
T ss_dssp CSSCCCEECTTTTTTCTTCC-----EEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTTHHHHHHH
T ss_pred CCCcccccChhhcccccccc-----EEECCCCccccCCHhHhccCCcccEEEccCCCcccCCCcchHHHHHH
Confidence 99999988899998877666 9999999999998754 78999999999999999998 34444444
No 267
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.68 E-value=1.8e-17 Score=177.48 Aligned_cols=140 Identities=26% Similarity=0.417 Sum_probs=93.2
Q ss_pred CCCceEEEeeCCcCCCCCC-CcCCCCcccEEeccCCcCcccCCCcccc-c-CccEEEccCccCCCCCCcccCCCcccceE
Q 005224 1 MSKLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQLNGSIPPGRLS-L-NITTIKLSNNKLTGTIPSNFSGLPRLQRL 77 (707)
Q Consensus 1 L~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~g~ip~~~~~-~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 77 (707)
|++|+.|+|++|+|+++++ .|.++++|++|+|++|+|+ .+|...+. + +|+.|+|++|+|++..|..|.++++|+.|
T Consensus 63 l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L 141 (361)
T 2xot_A 63 LTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLH-TLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKL 141 (361)
T ss_dssp CTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCC-EECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEE
T ss_pred ccccCEEECCCCcCCccChhhccCCCCCCEEECCCCcCC-cCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEE
Confidence 3567777777777777666 4777777777777777777 55554333 3 67777777777776667777777777777
Q ss_pred eccCcccccCCCCCcc-ccccCCCCccceEEccCccCCCCCCCC--CCCC--CceeeccCCCccccCCcccc
Q 005224 78 FIANNSLSGSIPSSIW-QSRTLNATETFILDFQNNNLTNISGSF--NIPP--NVTVRLRGNPFCLNTNAEQF 144 (707)
Q Consensus 78 ~ls~N~l~g~~p~~~~-~l~~L~~~~L~~l~l~~N~l~~~~~~~--~~~~--l~~l~l~~N~~~~~~~~~~~ 144 (707)
+|++|+|+ .+|..+. .+. .+++|+.|+|++|+|+.++... .++. +..|+|++|||.|+|.+..+
T Consensus 142 ~L~~N~l~-~l~~~~~~~~~--~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~C~C~l~~~ 210 (361)
T 2xot_A 142 YLSQNQIS-RFPVELIKDGN--KLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLECDCKLYQL 210 (361)
T ss_dssp ECCSSCCC-SCCGGGTC------CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSCEECCHHHHHH
T ss_pred ECCCCcCC-eeCHHHhcCcc--cCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCCCccCCcCcHHH
Confidence 77777777 4554431 101 1234447888888888776432 4554 36789999999999987653
No 268
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.68 E-value=5.4e-17 Score=186.13 Aligned_cols=146 Identities=21% Similarity=0.213 Sum_probs=123.3
Q ss_pred CCCceEEEeeCCcCCCCCC-CcCCCCcccEEeccCCcCccc-CCCccccc-CccEEEccCccCCCCCCcccCCCcccceE
Q 005224 1 MSKLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQLNGS-IPPGRLSL-NITTIKLSNNKLTGTIPSNFSGLPRLQRL 77 (707)
Q Consensus 1 L~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~g~-ip~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 77 (707)
+++|+.|+|++|++++.+| .|..+++|++|+|++|++++. +|..+..+ +|+.|+|++|++++..|..|.++++|+.|
T Consensus 423 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L 502 (606)
T 3vq2_A 423 LEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLL 502 (606)
T ss_dssp CTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred cccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEE
Confidence 4678888888888888776 588888888888888888864 56655555 89999999999998888889999999999
Q ss_pred eccCcccccCCCCCccccccCCCCccceEEccCccCCCCCCCC-CCC-CCceeeccCCCccccCCcccccCCCCCC
Q 005224 78 FIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSF-NIP-PNVTVRLRGNPFCLNTNAEQFCGSHSDD 151 (707)
Q Consensus 78 ~ls~N~l~g~~p~~~~~l~~L~~~~L~~l~l~~N~l~~~~~~~-~~~-~l~~l~l~~N~~~~~~~~~~~~~~~~~~ 151 (707)
+|++|++++.+|..+..+++|+ .|+|++|+|+.+|..+ .++ +|+.|++++|||.|+|....+..|....
T Consensus 503 ~Ls~N~l~~~~~~~~~~l~~L~-----~L~l~~N~l~~~p~~~~~l~~~L~~l~l~~N~~~c~c~~~~~~~~l~~~ 573 (606)
T 3vq2_A 503 NMSHNNLLFLDSSHYNQLYSLS-----TLDCSFNRIETSKGILQHFPKSLAFFNLTNNSVACICEHQKFLQWVKEQ 573 (606)
T ss_dssp ECCSSCCSCEEGGGTTTCTTCC-----EEECTTSCCCCEESCGGGSCTTCCEEECCSCCCCCSSTTHHHHTTTTTS
T ss_pred ECCCCcCCCcCHHHccCCCcCC-----EEECCCCcCcccCHhHhhhcccCcEEEccCCCcccCCccHHHHHHHHcC
Confidence 9999999977788888776665 9999999999998877 676 5999999999999999999999998653
No 269
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.68 E-value=1.6e-16 Score=174.96 Aligned_cols=122 Identities=24% Similarity=0.360 Sum_probs=96.7
Q ss_pred cCCCCcccEEeccCCcCcccCCCccccc-CccEEEccCccCCCCCCcccCCCcccceEeccCcccccCCCCCccccccCC
Q 005224 21 LSRIPNLGYLDLSSNQLNGSIPPGRLSL-NITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLN 99 (707)
Q Consensus 21 ~~~l~~L~~L~Ls~N~l~g~ip~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~ 99 (707)
|.++++|++|+|++|+|+ .+|. +..+ +|+.|+|++|+|++..|..|.++++|+.|+|++|+|++..|..+..+++|+
T Consensus 181 ~~~l~~L~~L~L~~n~l~-~~~~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 258 (440)
T 3zyj_A 181 FEGLSNLRYLNLAMCNLR-EIPN-LTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLV 258 (440)
T ss_dssp TTTCSSCCEEECTTSCCS-SCCC-CTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCC
T ss_pred hhcccccCeecCCCCcCc-cccc-cCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCC
Confidence 556666777777777777 6664 2223 788888888888877788888888888888888888877777777666555
Q ss_pred CCccceEEccCccCCCCCCCC--CCCCCceeeccCCCccccCCcccccCCCC
Q 005224 100 ATETFILDFQNNNLTNISGSF--NIPPNVTVRLRGNPFCLNTNAEQFCGSHS 149 (707)
Q Consensus 100 ~~~L~~l~l~~N~l~~~~~~~--~~~~l~~l~l~~N~~~~~~~~~~~~~~~~ 149 (707)
.|+|++|+|+.++... .+++|+.|+|++|||.|+|.+..+-.|..
T Consensus 259 -----~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC~l~~l~~~~~ 305 (440)
T 3zyj_A 259 -----EINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWNCNCDILWLSWWIK 305 (440)
T ss_dssp -----EEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEECSSTTHHHHHHHH
T ss_pred -----EEECCCCCCCccChhHhccccCCCEEEcCCCCccCCCCchHHHHHHH
Confidence 9999999999998765 78999999999999999999988766653
No 270
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.67 E-value=1.2e-16 Score=164.42 Aligned_cols=147 Identities=17% Similarity=0.223 Sum_probs=105.2
Q ss_pred CCceEEEeeCCcCCCCCC-CcCCCCcccEEeccCCcCcccCCC-ccccc-CccEEEccCccCCCC-CCcccCCCcccceE
Q 005224 2 SKLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQLNGSIPP-GRLSL-NITTIKLSNNKLTGT-IPSNFSGLPRLQRL 77 (707)
Q Consensus 2 ~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~g~ip~-~~~~~-~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L 77 (707)
++|++|+|++|+|++.++ .|.++++|++|+|++|+++ .++. .+..+ +|++|+|++|++++. +|..|.++++|++|
T Consensus 76 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L 154 (276)
T 2z62_A 76 SHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLA-SLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHL 154 (276)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCC-CSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEE
T ss_pred cCCCEEECCCCccCccChhhhcCCccccEEECCCCCcc-ccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEE
Confidence 456666666666666655 4666666666666666666 4444 33333 788888888888753 57888888888888
Q ss_pred eccCcccccCCCCCccccccCC----------------------CCccceEEccCccCCCCCCCC--CCCCCceeeccCC
Q 005224 78 FIANNSLSGSIPSSIWQSRTLN----------------------ATETFILDFQNNNLTNISGSF--NIPPNVTVRLRGN 133 (707)
Q Consensus 78 ~ls~N~l~g~~p~~~~~l~~L~----------------------~~~L~~l~l~~N~l~~~~~~~--~~~~l~~l~l~~N 133 (707)
+|++|++++..+..+..+.+|+ ..+|+.|+|++|+|++++... .+++|+.|++++|
T Consensus 155 ~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N 234 (276)
T 2z62_A 155 DLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTN 234 (276)
T ss_dssp ECCSSCCCEECGGGGHHHHTCTTCCEEEECCSSCCCEECTTSSCSCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSS
T ss_pred ECCCCCCCcCCHHHhhhhhhccccceeeecCCCcccccCccccCCCcccEEECCCCceeecCHhHhcccccccEEEccCC
Confidence 8888888865555555444332 126789999999999998764 7899999999999
Q ss_pred CccccCC-cccccCCCC
Q 005224 134 PFCLNTN-AEQFCGSHS 149 (707)
Q Consensus 134 ~~~~~~~-~~~~~~~~~ 149 (707)
+|.|+|. +..++.|..
T Consensus 235 ~~~c~c~~l~~l~~~~~ 251 (276)
T 2z62_A 235 PWDCSCPRIDYLSRWLN 251 (276)
T ss_dssp CBCCCTTTTHHHHHHHH
T ss_pred cccccCCchHHHHHHHH
Confidence 9999996 555666653
No 271
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.66 E-value=1.5e-16 Score=166.25 Aligned_cols=144 Identities=19% Similarity=0.268 Sum_probs=105.2
Q ss_pred CCCceEEEeeCCcCCCCCC-CcCCCCcccEEeccCCcCcc-cCCCccccc-CccEEEccCccCCCCCCcccCCCcccceE
Q 005224 1 MSKLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQLNG-SIPPGRLSL-NITTIKLSNNKLTGTIPSNFSGLPRLQRL 77 (707)
Q Consensus 1 L~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~g-~ip~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 77 (707)
+++|+.|+|++|.+++..+ .|..+++|++|+|++|.+++ .+|..+..+ +|+.|+|++|+|++..|..|.++++|+.|
T Consensus 125 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L 204 (306)
T 2z66_A 125 LRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVL 204 (306)
T ss_dssp CTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred ccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEE
Confidence 3567777777777776666 46777777777777777774 355555544 78888888888887667778788888888
Q ss_pred eccCcccccCCCCCccccccCCCCccceEEccCccCCCCCCC-C-CCC-CCceeeccCCCccccCCcccccCCCC
Q 005224 78 FIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGS-F-NIP-PNVTVRLRGNPFCLNTNAEQFCGSHS 149 (707)
Q Consensus 78 ~ls~N~l~g~~p~~~~~l~~L~~~~L~~l~l~~N~l~~~~~~-~-~~~-~l~~l~l~~N~~~~~~~~~~~~~~~~ 149 (707)
+|++|++++..+..+..+++| +.|+|++|++++.++. + .++ +|+.|++++|+|.|+|....+-.|..
T Consensus 205 ~L~~N~l~~~~~~~~~~l~~L-----~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~c~~~~~~~~l~ 274 (306)
T 2z66_A 205 NMSHNNFFSLDTFPYKCLNSL-----QVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEHQSFLQWIK 274 (306)
T ss_dssp ECTTSCCSBCCSGGGTTCTTC-----CEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECSGGGHHHHHHHH
T ss_pred ECCCCccCccChhhccCcccC-----CEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeecccChHHHHHHHH
Confidence 888888875444455555444 4899999999887554 3 564 89999999999999998877776653
No 272
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.65 E-value=2.1e-16 Score=186.31 Aligned_cols=135 Identities=31% Similarity=0.492 Sum_probs=102.0
Q ss_pred CCCceEEEeeCCcCCCCCC-CcCCCCcccEEeccCCcCcccCCCcccc--------------------------------
Q 005224 1 MSKLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQLNGSIPPGRLS-------------------------------- 47 (707)
Q Consensus 1 L~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~g~ip~~~~~-------------------------------- 47 (707)
|++|+.|+|++|++++.+| .++.+++|++|+|++|+++|.+|..++.
T Consensus 513 l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 592 (768)
T 3rgz_A 513 LENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGN 592 (768)
T ss_dssp CTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEE
T ss_pred CCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhcccccccccccccccccccccccc
Confidence 3566667777777766655 5667777777777777777777754321
Q ss_pred --------------------------------------c-CccEEEccCccCCCCCCcccCCCcccceEeccCcccccCC
Q 005224 48 --------------------------------------L-NITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSI 88 (707)
Q Consensus 48 --------------------------------------~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~ 88 (707)
. +|+.|||++|+|+|.+|.+|+++++|+.|+|++|+|+|.+
T Consensus 593 ~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~i 672 (768)
T 3rgz_A 593 LLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSI 672 (768)
T ss_dssp EEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCC
T ss_pred ccccccccchhhhccccccccccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCC
Confidence 1 4778888888888888888888888888888888888888
Q ss_pred CCCccccccCCCCccceEEccCccCCCC-CCCC-CCCCCceeeccCCCccccCC
Q 005224 89 PSSIWQSRTLNATETFILDFQNNNLTNI-SGSF-NIPPNVTVRLRGNPFCLNTN 140 (707)
Q Consensus 89 p~~~~~l~~L~~~~L~~l~l~~N~l~~~-~~~~-~~~~l~~l~l~~N~~~~~~~ 140 (707)
|..+++++.|+ .|||++|+|++. |..+ .++.|+.|++++|++.+..+
T Consensus 673 p~~l~~L~~L~-----~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP 721 (768)
T 3rgz_A 673 PDEVGDLRGLN-----ILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIP 721 (768)
T ss_dssp CGGGGGCTTCC-----EEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEECC
T ss_pred ChHHhCCCCCC-----EEECCCCcccCcCChHHhCCCCCCEEECcCCcccccCC
Confidence 88888877666 889999998865 4444 78888889999888876544
No 273
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.65 E-value=2.5e-16 Score=173.94 Aligned_cols=141 Identities=23% Similarity=0.350 Sum_probs=108.8
Q ss_pred CCCceEEEeeCCcCCCCCC--------------------------CcCCCCcccEEeccCCcCcccCCCccccc-CccEE
Q 005224 1 MSKLLKLSLRNCSLQGPMP--------------------------DLSRIPNLGYLDLSSNQLNGSIPPGRLSL-NITTI 53 (707)
Q Consensus 1 L~~L~~L~L~~N~l~~~~~--------------------------~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~-~L~~L 53 (707)
|++|+.|+|++|+|+.+++ .|.++++|++|+|++|+|+ .+|. +..+ +|+.|
T Consensus 146 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~~~-~~~l~~L~~L 223 (452)
T 3zyi_A 146 LSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIK-DMPN-LTPLVGLEEL 223 (452)
T ss_dssp CTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCS-SCCC-CTTCTTCCEE
T ss_pred cCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccc-cccc-ccccccccEE
Confidence 3566667777666665544 2555666677777777777 5554 2233 78888
Q ss_pred EccCccCCCCCCcccCCCcccceEeccCcccccCCCCCccccccCCCCccceEEccCccCCCCCCCC--CCCCCceeecc
Q 005224 54 KLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSF--NIPPNVTVRLR 131 (707)
Q Consensus 54 ~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~~~L~~l~l~~N~l~~~~~~~--~~~~l~~l~l~ 131 (707)
+|++|+|++..|..|.++++|+.|+|++|++++..|..+..+++|+ .|+|++|+|++++... .+++|+.|+|+
T Consensus 224 ~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~-----~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 298 (452)
T 3zyi_A 224 EMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLV-----ELNLAHNNLSSLPHDLFTPLRYLVELHLH 298 (452)
T ss_dssp ECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCC-----EEECCSSCCSCCCTTSSTTCTTCCEEECC
T ss_pred ECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCC-----EEECCCCcCCccChHHhccccCCCEEEcc
Confidence 8888888877788888888888889988888877777777766655 9999999999998765 78999999999
Q ss_pred CCCccccCCcccccCCC
Q 005224 132 GNPFCLNTNAEQFCGSH 148 (707)
Q Consensus 132 ~N~~~~~~~~~~~~~~~ 148 (707)
+|||.|+|.+..+-.|.
T Consensus 299 ~Np~~CdC~~~~l~~~l 315 (452)
T 3zyi_A 299 HNPWNCDCDILWLAWWL 315 (452)
T ss_dssp SSCEECSTTTHHHHHHH
T ss_pred CCCcCCCCCchHHHHHH
Confidence 99999999988776554
No 274
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.64 E-value=2e-16 Score=181.88 Aligned_cols=145 Identities=19% Similarity=0.263 Sum_probs=125.6
Q ss_pred CCCceEEEeeCCcCCCCCC-CcCCCCcccEEeccCCcCccc-CCCccccc-CccEEEccCccCCCCCCcccCCCcccceE
Q 005224 1 MSKLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQLNGS-IPPGRLSL-NITTIKLSNNKLTGTIPSNFSGLPRLQRL 77 (707)
Q Consensus 1 L~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~g~-ip~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 77 (707)
+++|+.+++++|.+++..+ .+..+++|+.|+|++|++... +|..+..+ +|+.|+|++|+|++..|..|.++++|++|
T Consensus 444 l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L 523 (635)
T 4g8a_A 444 LRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVL 523 (635)
T ss_dssp CTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred ccccccccccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEE
Confidence 4678899999999999888 688899999999999986544 45555445 89999999999999999999999999999
Q ss_pred eccCcccccCCCCCccccccCCCCccceEEccCccCCCCCCCC--CC-CCCceeeccCCCccccCCcccccCCCCC
Q 005224 78 FIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSF--NI-PPNVTVRLRGNPFCLNTNAEQFCGSHSD 150 (707)
Q Consensus 78 ~ls~N~l~g~~p~~~~~l~~L~~~~L~~l~l~~N~l~~~~~~~--~~-~~l~~l~l~~N~~~~~~~~~~~~~~~~~ 150 (707)
+|++|+|++..|..+..+++|+ +|||++|+|+++++.. .+ ++|+.|+|++|||.|+|.+..|-.|...
T Consensus 524 ~Ls~N~l~~l~~~~~~~l~~L~-----~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C~~~~~~~wl~~ 594 (635)
T 4g8a_A 524 NMSHNNFFSLDTFPYKCLNSLQ-----VLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEHQSFLQWIKD 594 (635)
T ss_dssp ECTTSCCCBCCCGGGTTCTTCC-----EEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCSGGGHHHHHHHHH
T ss_pred ECCCCcCCCCChhHHhCCCCCC-----EEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcccCCcHHHHHHHHh
Confidence 9999999977777888776665 9999999999997654 56 5799999999999999999999888743
No 275
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.64 E-value=1.5e-15 Score=153.80 Aligned_cols=130 Identities=25% Similarity=0.350 Sum_probs=110.9
Q ss_pred CCceEEEeeCCcCCCCCC-CcCCCCcccEEeccCCcCcccCCCc-cccc-CccEEEccCccCCCCCCcccCCCcccceEe
Q 005224 2 SKLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQLNGSIPPG-RLSL-NITTIKLSNNKLTGTIPSNFSGLPRLQRLF 78 (707)
Q Consensus 2 ~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~g~ip~~-~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 78 (707)
++|+.|+|++|+|+++.+ .|.++++|++|+|++|+|+ .++.. +..+ +|++|+|++|+|++..+..|..+++|++|+
T Consensus 35 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 113 (251)
T 3m19_A 35 ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQ-TLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLY 113 (251)
T ss_dssp TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCC-CCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCC-ccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEE
Confidence 468999999999999888 6999999999999999999 55554 4444 899999999999977778899999999999
Q ss_pred ccCcccccCCCCCccccccCCCCccceEEccCccCCCCCCC-C-CCCCCceeeccCCCccc
Q 005224 79 IANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGS-F-NIPPNVTVRLRGNPFCL 137 (707)
Q Consensus 79 ls~N~l~g~~p~~~~~l~~L~~~~L~~l~l~~N~l~~~~~~-~-~~~~l~~l~l~~N~~~~ 137 (707)
|++|+|++..+..+..+++|+ .|+|++|+|+++++. + .+++|+.|+|++|.+..
T Consensus 114 L~~N~l~~~~~~~~~~l~~L~-----~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 169 (251)
T 3m19_A 114 LGGNQLKSLPSGVFDRLTKLK-----ELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQS 169 (251)
T ss_dssp CCSSCCCCCCTTTTTTCTTCC-----EEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSC
T ss_pred cCCCcCCCcChhHhccCCccc-----EEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCc
Confidence 999999955555566666555 999999999999874 4 78999999999999863
No 276
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.64 E-value=4e-16 Score=165.43 Aligned_cols=137 Identities=17% Similarity=0.201 Sum_probs=101.2
Q ss_pred cCCCccceEeeeCceEEEEEEeCCCcEEEEEEeccCCh--------------hhH--------HHHHHHHHHHHccCCCc
Q 005224 375 NNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSL--------------QGE--------KEFLTEIQFLSRLHHRN 432 (707)
Q Consensus 375 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~--------------~~~--------~~~~~E~~~l~~l~H~n 432 (707)
.-|++...||+|+||.||+|...+|+.||||+++.... ... ....+|...|.++.+.+
T Consensus 95 ~iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~g 174 (397)
T 4gyi_A 95 DVYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEG 174 (397)
T ss_dssp SCSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CEEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcC
Confidence 34889999999999999999998999999998753210 000 11345677777775444
Q ss_pred ce--eEEEEEEeCCeEEEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEc
Q 005224 433 LV--SLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLD 510 (707)
Q Consensus 433 Iv--~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~ 510 (707)
+. ..++. . ..+|||||+++++|.++... .....++.|++.+|.|||+.+ ||||||||.|||++
T Consensus 175 v~vp~p~~~--~--~~~LVME~i~G~~L~~l~~~--------~~~~~l~~qll~~l~~lH~~g---IVHrDLKp~NILl~ 239 (397)
T 4gyi_A 175 FPVPEPIAQ--S--RHTIVMSLVDALPMRQVSSV--------PDPASLYADLIALILRLAKHG---LIHGDFNEFNILIR 239 (397)
T ss_dssp CSCCCEEEE--E--TTEEEEECCSCEEGGGCCCC--------SCHHHHHHHHHHHHHHHHHTT---EECSCCSTTSEEEE
T ss_pred CCCCeeeec--c--CceEEEEecCCccHhhhccc--------HHHHHHHHHHHHHHHHHHHCC---CcCCCCCHHHEEEe
Confidence 32 22322 1 23799999999888654311 123567899999999999999 99999999999998
Q ss_pred CCC----------cEEEeeecccccC
Q 005224 511 HKF----------TAKVADFGLSRLA 526 (707)
Q Consensus 511 ~~~----------~~kl~DFGla~~~ 526 (707)
+++ .+.|+||+-+...
T Consensus 240 ~dgd~~d~~~~~~~~~iID~~Q~V~~ 265 (397)
T 4gyi_A 240 EEKDAEDPSSITLTPIIIXFPQMVSM 265 (397)
T ss_dssp EEECSSCTTSEEEEEEECCCTTCEET
T ss_pred CCCCcccccccccceEEEEeCCcccC
Confidence 776 3899999977643
No 277
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.63 E-value=1.8e-15 Score=144.63 Aligned_cols=129 Identities=21% Similarity=0.315 Sum_probs=110.9
Q ss_pred ceEEEeeCCcCCCCCCCcCCCCcccEEeccCCcCcccCCCccc-cc-CccEEEccCccCCCCCCcccCCCcccceEeccC
Q 005224 4 LLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRL-SL-NITTIKLSNNKLTGTIPSNFSGLPRLQRLFIAN 81 (707)
Q Consensus 4 L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~ip~~~~-~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~ 81 (707)
.+.+++++|+++.++..+. ++|++|+|++|+|+ .+|...+ .+ +|++|+|++|+|++..+..|.++++|++|+|++
T Consensus 9 ~~~l~~~~~~l~~~p~~~~--~~l~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 85 (177)
T 2o6r_A 9 GTEIRCNSKGLTSVPTGIP--SSATRLELESNKLQ-SLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHE 85 (177)
T ss_dssp TTEEECCSSCCSSCCTTCC--TTCSEEECCSSCCC-CCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEecCCCCccCCCCCC--CCCcEEEeCCCccc-EeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCC
Confidence 4689999999998776543 79999999999999 7777654 34 899999999999977777789999999999999
Q ss_pred cccccCCCCCccccccCCCCccceEEccCccCCCCCCCC--CCCCCceeeccCCCccccCC
Q 005224 82 NSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSF--NIPPNVTVRLRGNPFCLNTN 140 (707)
Q Consensus 82 N~l~g~~p~~~~~l~~L~~~~L~~l~l~~N~l~~~~~~~--~~~~l~~l~l~~N~~~~~~~ 140 (707)
|+|++..+..+..+++|+ +|+|++|+|+++++.. .+++|+.|++++|+|.|+|.
T Consensus 86 N~l~~~~~~~~~~l~~L~-----~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 86 NKLQSLPNGVFDKLTQLK-----ELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp SCCCCCCTTTTTTCTTCC-----EEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CCccccCHHHhhCCcccC-----EEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 999966666667766665 9999999999998865 68999999999999999886
No 278
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.62 E-value=5.7e-16 Score=182.56 Aligned_cols=112 Identities=27% Similarity=0.400 Sum_probs=98.3
Q ss_pred cCCCCcccEEeccCCcCcccCCCccccc-CccEEEccCccCCCCCCcccCCCcccceEeccCcccccCCCCCccccccCC
Q 005224 21 LSRIPNLGYLDLSSNQLNGSIPPGRLSL-NITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLN 99 (707)
Q Consensus 21 ~~~l~~L~~L~Ls~N~l~g~ip~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~ 99 (707)
++.+++|++|||++|+|+|.+|..+..+ +|+.|+|++|+|+|.+|..|+++++|+.|||++|+++|.+|..+..++.|+
T Consensus 628 ~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~ 707 (768)
T 3rgz_A 628 FDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLT 707 (768)
T ss_dssp CSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCS
T ss_pred hhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCC
Confidence 3446789999999999999999998887 899999999999999999999999999999999999999999999887776
Q ss_pred CCccceEEccCccCCCCCCCC-CCCCCceeeccCCCccc
Q 005224 100 ATETFILDFQNNNLTNISGSF-NIPPNVTVRLRGNPFCL 137 (707)
Q Consensus 100 ~~~L~~l~l~~N~l~~~~~~~-~~~~l~~l~l~~N~~~~ 137 (707)
+|||++|+|++..+.. .+..+....+.+||.-|
T Consensus 708 -----~L~ls~N~l~g~iP~~~~~~~~~~~~~~gN~~Lc 741 (768)
T 3rgz_A 708 -----EIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLC 741 (768)
T ss_dssp -----EEECCSSEEEEECCSSSSGGGSCGGGGCSCTEEE
T ss_pred -----EEECcCCcccccCCCchhhccCCHHHhcCCchhc
Confidence 9999999999865443 55566667788998544
No 279
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.61 E-value=1e-15 Score=161.58 Aligned_cols=130 Identities=19% Similarity=0.311 Sum_probs=109.6
Q ss_pred CCceEEEeeCCcCCCCCCCcCCCCcccEEeccCCcCcccCCCccccc-CccEEEccCccCCCCCCcccCCCcccceEecc
Q 005224 2 SKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSL-NITTIKLSNNKLTGTIPSNFSGLPRLQRLFIA 80 (707)
Q Consensus 2 ~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls 80 (707)
++|+.|+|++|+|+.+++.++++++|++|+|++|.|+ .+|..+..+ +|++|+|++|+|+ .+|..|+++++|++|+|+
T Consensus 81 ~~l~~L~L~~n~l~~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~ 158 (328)
T 4fcg_A 81 PGRVALELRSVPLPQFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIR 158 (328)
T ss_dssp TTCCEEEEESSCCSSCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEE
T ss_pred cceeEEEccCCCchhcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECC
Confidence 5788999999999977778888999999999999999 899877766 8999999999999 888889999999999999
Q ss_pred CcccccCCCCCccc---------cccCCCCccceEEccCccCCCCCCCC-CCCCCceeeccCCCcccc
Q 005224 81 NNSLSGSIPSSIWQ---------SRTLNATETFILDFQNNNLTNISGSF-NIPPNVTVRLRGNPFCLN 138 (707)
Q Consensus 81 ~N~l~g~~p~~~~~---------l~~L~~~~L~~l~l~~N~l~~~~~~~-~~~~l~~l~l~~N~~~~~ 138 (707)
+|++.+.+|..+.. +++| ++|+|++|+|+.+|..+ .+++|+.|++++|.+...
T Consensus 159 ~n~~~~~~p~~~~~~~~~~~~~~l~~L-----~~L~L~~n~l~~lp~~l~~l~~L~~L~L~~N~l~~l 221 (328)
T 4fcg_A 159 ACPELTELPEPLASTDASGEHQGLVNL-----QSLRLEWTGIRSLPASIANLQNLKSLKIRNSPLSAL 221 (328)
T ss_dssp EETTCCCCCSCSEEEC-CCCEEESTTC-----CEEEEEEECCCCCCGGGGGCTTCCEEEEESSCCCCC
T ss_pred CCCCccccChhHhhccchhhhccCCCC-----CEEECcCCCcCcchHhhcCCCCCCEEEccCCCCCcC
Confidence 98888888887754 4444 48888888888887766 788888888888888643
No 280
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.61 E-value=2.3e-15 Score=155.93 Aligned_cols=128 Identities=21% Similarity=0.199 Sum_probs=79.3
Q ss_pred CCceEEEeeCCcCCCCCC-CcCCCCcccEEeccCCcCcccCCCcccccCccEEEccCccCCCCCCcccCCCcccceEecc
Q 005224 2 SKLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIA 80 (707)
Q Consensus 2 ~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls 80 (707)
++|+.|+|++|+|+++.+ .|..+++|++|+|++|.|+ .++......+|+.|+|++|+|+ .+|..+..+++|++|+|+
T Consensus 31 ~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~ 108 (290)
T 1p9a_G 31 KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELT-KLQVDGTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVS 108 (290)
T ss_dssp TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCC-EEECCSCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECC
T ss_pred CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccC-cccCCCCCCcCCEEECCCCcCC-cCchhhccCCCCCEEECC
Confidence 356777777777776665 5677777777777777776 4554321126666666666666 566666666666666666
Q ss_pred CcccccCCCCCccccccCCCCccceEEccCccCCCCCCCC--CCCCCceeeccCCCcc
Q 005224 81 NNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSF--NIPPNVTVRLRGNPFC 136 (707)
Q Consensus 81 ~N~l~g~~p~~~~~l~~L~~~~L~~l~l~~N~l~~~~~~~--~~~~l~~l~l~~N~~~ 136 (707)
+|+|++..|..+..+++|+ .|+|++|+|+++++.. .+++|+.|+|++|.+.
T Consensus 109 ~N~l~~l~~~~~~~l~~L~-----~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 161 (290)
T 1p9a_G 109 FNRLTSLPLGALRGLGELQ-----ELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLT 161 (290)
T ss_dssp SSCCCCCCSSTTTTCTTCC-----EEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCS
T ss_pred CCcCcccCHHHHcCCCCCC-----EEECCCCCCCccChhhcccccCCCEEECCCCcCC
Confidence 6666644445555544443 6666666666665543 5566666666666654
No 281
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.60 E-value=4.7e-16 Score=163.05 Aligned_cols=131 Identities=28% Similarity=0.450 Sum_probs=105.4
Q ss_pred CCCceEEEeeC-CcCCCCCC-CcCCCCcccEEeccCCcCcccCCCccccc-CccEEEccCccCCCCCCcccCCCcccceE
Q 005224 1 MSKLLKLSLRN-CSLQGPMP-DLSRIPNLGYLDLSSNQLNGSIPPGRLSL-NITTIKLSNNKLTGTIPSNFSGLPRLQRL 77 (707)
Q Consensus 1 L~~L~~L~L~~-N~l~~~~~-~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 77 (707)
|++|++|+|++ |++++.+| .|+++++|++|+|++|+|+|.+|..+..+ +|++|+|++|+|++.+|..|.++++|++|
T Consensus 75 l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 154 (313)
T 1ogq_A 75 LPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGI 154 (313)
T ss_dssp CTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEE
T ss_pred CCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeE
Confidence 56889999994 88888777 68889999999999999988888877766 89999999999998889889999999999
Q ss_pred eccCcccccCCCCCccccc-cCCCCccceEEccCccCCCC-CCCC-CCCCCceeeccCCCccc
Q 005224 78 FIANNSLSGSIPSSIWQSR-TLNATETFILDFQNNNLTNI-SGSF-NIPPNVTVRLRGNPFCL 137 (707)
Q Consensus 78 ~ls~N~l~g~~p~~~~~l~-~L~~~~L~~l~l~~N~l~~~-~~~~-~~~~l~~l~l~~N~~~~ 137 (707)
+|++|+++|.+|..+..+. .|+ .|+|++|++++. |..+ .+. |+.|++++|.+..
T Consensus 155 ~L~~N~l~~~~p~~l~~l~~~L~-----~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~~ 211 (313)
T 1ogq_A 155 TFDGNRISGAIPDSYGSFSKLFT-----SMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEG 211 (313)
T ss_dssp ECCSSCCEEECCGGGGCCCTTCC-----EEECCSSEEEEECCGGGGGCC-CSEEECCSSEEEE
T ss_pred ECcCCcccCcCCHHHhhhhhcCc-----EEECcCCeeeccCChHHhCCc-ccEEECcCCcccC
Confidence 9999999888888887765 554 788888887743 4444 333 7777777777653
No 282
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.60 E-value=6.1e-15 Score=151.08 Aligned_cols=131 Identities=24% Similarity=0.326 Sum_probs=108.7
Q ss_pred CCceEEEeeCCcCCCCCC-CcCCCCcccEEeccCCcCcccCCCcccc-c-CccEEEccCccCCCCCCcccCCCcccceEe
Q 005224 2 SKLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQLNGSIPPGRLS-L-NITTIKLSNNKLTGTIPSNFSGLPRLQRLF 78 (707)
Q Consensus 2 ~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~g~ip~~~~~-~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 78 (707)
++|+.|+|++|+|+++++ .|.++++|++|+|++|+|+ .+|...+. + +|++|+|++|+|++..+..|.++++|++|+
T Consensus 37 ~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 115 (270)
T 2o6q_A 37 ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQ-TLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELR 115 (270)
T ss_dssp TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCS-CCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEE
T ss_pred CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccC-eeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEE
Confidence 368899999999998887 6899999999999999999 88887654 3 899999999999976667788999999999
Q ss_pred ccCcccccCCCCCccccccCCCCccceEEccCccCCCCCCCC--CCCCCceeeccCCCcccc
Q 005224 79 IANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSF--NIPPNVTVRLRGNPFCLN 138 (707)
Q Consensus 79 ls~N~l~g~~p~~~~~l~~L~~~~L~~l~l~~N~l~~~~~~~--~~~~l~~l~l~~N~~~~~ 138 (707)
|++|++++..|..+..+++|+ +|+|++|+|+.++... .+++|+.|++++|.+...
T Consensus 116 l~~n~l~~~~~~~~~~l~~L~-----~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~ 172 (270)
T 2o6q_A 116 LDRNQLKSLPPRVFDSLTKLT-----YLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRV 172 (270)
T ss_dssp CCSSCCCCCCTTTTTTCTTCC-----EEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCC
T ss_pred CCCCccCeeCHHHhCcCcCCC-----EEECCCCcCCccCHhHccCCcccceeEecCCcCcEe
Confidence 999999966666677666555 8999999999887753 788899999999887643
No 283
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.60 E-value=5.8e-15 Score=151.46 Aligned_cols=129 Identities=27% Similarity=0.345 Sum_probs=83.8
Q ss_pred CCCceEEEeeCCcCCCCCCCcCCCCcccEEeccCCcCcccCCCcc-ccc-CccEEEccCccCCCCCCcccCCCcccceEe
Q 005224 1 MSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGR-LSL-NITTIKLSNNKLTGTIPSNFSGLPRLQRLF 78 (707)
Q Consensus 1 L~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~ip~~~-~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 78 (707)
+++|++|+|++|++++. +.+..+++|++|+|++|.|+ .+|... ..+ +|++|+|++|+|++..+..|.++++|++|+
T Consensus 62 l~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 139 (272)
T 3rfs_A 62 LPNVRYLALGGNKLHDI-SALKELTNLTYLILTGNQLQ-SLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLN 139 (272)
T ss_dssp CTTCCEEECTTSCCCCC-GGGTTCTTCCEEECTTSCCC-CCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCcEEECCCCCCCCc-hhhcCCCCCCEEECCCCccC-ccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEE
Confidence 45677777777777653 45666777777777777777 455443 233 677777777777765556667777777777
Q ss_pred ccCcccccCCCCCccccccCCCCccceEEccCccCCCCCCCC--CCCCCceeeccCCCcc
Q 005224 79 IANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSF--NIPPNVTVRLRGNPFC 136 (707)
Q Consensus 79 ls~N~l~g~~p~~~~~l~~L~~~~L~~l~l~~N~l~~~~~~~--~~~~l~~l~l~~N~~~ 136 (707)
|++|++++..|..+..+++|+ .|+|++|+|+++++.. .+++|+.|++++|.+.
T Consensus 140 L~~n~l~~~~~~~~~~l~~L~-----~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~ 194 (272)
T 3rfs_A 140 LAHNQLQSLPKGVFDKLTNLT-----ELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLK 194 (272)
T ss_dssp CCSSCCCCCCTTTTTTCTTCC-----EEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCS
T ss_pred CCCCccCccCHHHhccCccCC-----EEECCCCCcCccCHHHhcCCccCCEEECCCCcCC
Confidence 777777744444455544444 7777777777766543 5677777777777664
No 284
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.60 E-value=9.5e-16 Score=160.75 Aligned_cols=132 Identities=28% Similarity=0.507 Sum_probs=116.3
Q ss_pred CCCceEEEeeCCcCCCCCC-CcCCCCcccEEeccCCcCcccCCCccccc-CccEEEccCccCCCCCCcccCCCc-ccceE
Q 005224 1 MSKLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQLNGSIPPGRLSL-NITTIKLSNNKLTGTIPSNFSGLP-RLQRL 77 (707)
Q Consensus 1 L~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L 77 (707)
|++|++|+|++|++++.+| .|.++++|++|+|++|+|+|.+|..+..+ +|++|+|++|+|++.+|..|++++ +|+.|
T Consensus 100 l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L 179 (313)
T 1ogq_A 100 LTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSM 179 (313)
T ss_dssp CTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEE
T ss_pred CCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEE
Confidence 5789999999999998777 69999999999999999998899887776 899999999999999999999998 99999
Q ss_pred eccCcccccCCCCCccccccCCCCccceEEccCccCCCCCCC-C-CCCCCceeeccCCCcccc
Q 005224 78 FIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGS-F-NIPPNVTVRLRGNPFCLN 138 (707)
Q Consensus 78 ~ls~N~l~g~~p~~~~~l~~L~~~~L~~l~l~~N~l~~~~~~-~-~~~~l~~l~l~~N~~~~~ 138 (707)
+|++|+++|.+|..+..+. | +.|+|++|++++.++. + .+++|+.|++++|.+...
T Consensus 180 ~L~~N~l~~~~~~~~~~l~-L-----~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 236 (313)
T 1ogq_A 180 TISRNRLTGKIPPTFANLN-L-----AFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFD 236 (313)
T ss_dssp ECCSSEEEEECCGGGGGCC-C-----SEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCB
T ss_pred ECcCCeeeccCChHHhCCc-c-----cEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeee
Confidence 9999999999999888764 4 4999999999876443 3 788999999999988644
No 285
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.59 E-value=1.9e-15 Score=171.70 Aligned_cols=138 Identities=19% Similarity=0.244 Sum_probs=88.8
Q ss_pred CCceEEEeeCCcCCCCCC-CcCCCCcccEEeccCCcCcccCCC---ccccc-CccEEEccCccCCCCCCcc-cCCC----
Q 005224 2 SKLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQLNGSIPP---GRLSL-NITTIKLSNNKLTGTIPSN-FSGL---- 71 (707)
Q Consensus 2 ~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~g~ip~---~~~~~-~L~~L~Ls~N~l~~~~p~~-~~~l---- 71 (707)
++|+.|+|++|++++..| .+.++++|++|+|++|+|+ .++. .+..+ +|+.|+|++|++++.+|.. |..+
T Consensus 353 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~ 431 (562)
T 3a79_B 353 SSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLK-NFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESIL 431 (562)
T ss_dssp CCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCC-BTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCC
T ss_pred CCceEEECCCCccccchhhhhcccCCCCEEECCCCCcC-CcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCC
Confidence 456666666666666444 4556666666666666665 3332 22222 5555555555555433332 3333
Q ss_pred ------------------cccceEeccCcccccCCCCCccccccCCCCccceEEccCccCCCCCCC-C-CCCCCceeecc
Q 005224 72 ------------------PRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGS-F-NIPPNVTVRLR 131 (707)
Q Consensus 72 ------------------~~L~~L~ls~N~l~g~~p~~~~~l~~L~~~~L~~l~l~~N~l~~~~~~-~-~~~~l~~l~l~ 131 (707)
++|+.|+|++|+|+ .+|..+..++ +|+.|+|++|+|+.+|.. + .+++|+.|+++
T Consensus 432 ~L~l~~n~l~~~~~~~l~~~L~~L~L~~N~l~-~ip~~~~~l~-----~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~ 505 (562)
T 3a79_B 432 VLNLSSNMLTGSVFRCLPPKVKVLDLHNNRIM-SIPKDVTHLQ-----ALQELNVASNQLKSVPDGVFDRLTSLQYIWLH 505 (562)
T ss_dssp EEECCSSCCCGGGGSSCCTTCSEEECCSSCCC-CCCTTTTSSC-----CCSEEECCSSCCCCCCTTSTTTCTTCCCEECC
T ss_pred EEECCCCCCCcchhhhhcCcCCEEECCCCcCc-ccChhhcCCC-----CCCEEECCCCCCCCCCHHHHhcCCCCCEEEec
Confidence 45666666666666 5666555544 445999999999999887 4 78999999999
Q ss_pred CCCccccCCcccccC
Q 005224 132 GNPFCLNTNAEQFCG 146 (707)
Q Consensus 132 ~N~~~~~~~~~~~~~ 146 (707)
+|||.|+|....+-.
T Consensus 506 ~N~~~c~c~~~~~~~ 520 (562)
T 3a79_B 506 DNPWDCTCPGIRYLS 520 (562)
T ss_dssp SCCBCCCHHHHHHHH
T ss_pred CCCcCCCcchHHHHH
Confidence 999999999877644
No 286
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.59 E-value=2.7e-15 Score=158.29 Aligned_cols=131 Identities=22% Similarity=0.348 Sum_probs=118.7
Q ss_pred CCCceEEEeeCCcCCCCCCCcCCCCcccEEeccCCcCcccCCCccccc-CccEEEccCccCCCCCCcccCC---------
Q 005224 1 MSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSL-NITTIKLSNNKLTGTIPSNFSG--------- 70 (707)
Q Consensus 1 L~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~--------- 70 (707)
|++|++|+|++|+|+.++..|+.+++|++|+|++|+|+ .+|..+..+ +|++|+|++|++.+.+|..+..
T Consensus 103 l~~L~~L~L~~n~l~~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~~ 181 (328)
T 4fcg_A 103 LSHLQHMTIDAAGLMELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASGEHQG 181 (328)
T ss_dssp GTTCSEEEEESSCCCCCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCCEEE
T ss_pred CCCCCEEECCCCCccchhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccchhhhcc
Confidence 46899999999999955558999999999999999999 999988777 8999999999999999998765
Q ss_pred CcccceEeccCcccccCCCCCccccccCCCCccceEEccCccCCCCCCCC-CCCCCceeeccCCCcccc
Q 005224 71 LPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSF-NIPPNVTVRLRGNPFCLN 138 (707)
Q Consensus 71 l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~~~L~~l~l~~N~l~~~~~~~-~~~~l~~l~l~~N~~~~~ 138 (707)
+++|++|+|++|+|+ .+|..+..+++|+ +|+|++|+++++|+.+ .+++|+.|++++|.+...
T Consensus 182 l~~L~~L~L~~n~l~-~lp~~l~~l~~L~-----~L~L~~N~l~~l~~~l~~l~~L~~L~Ls~n~~~~~ 244 (328)
T 4fcg_A 182 LVNLQSLRLEWTGIR-SLPASIANLQNLK-----SLKIRNSPLSALGPAIHHLPKLEELDLRGCTALRN 244 (328)
T ss_dssp STTCCEEEEEEECCC-CCCGGGGGCTTCC-----EEEEESSCCCCCCGGGGGCTTCCEEECTTCTTCCB
T ss_pred CCCCCEEECcCCCcC-cchHhhcCCCCCC-----EEEccCCCCCcCchhhccCCCCCEEECcCCcchhh
Confidence 999999999999999 9999998877666 9999999999998877 899999999999987543
No 287
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.58 E-value=3.3e-15 Score=141.83 Aligned_cols=118 Identities=25% Similarity=0.288 Sum_probs=100.8
Q ss_pred cccEEeccCCcCcccCCCcccccCccEEEccCccCCCCCCcccCCCcccceEeccCcccccCCCCCccccccCCCCccce
Q 005224 26 NLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFI 105 (707)
Q Consensus 26 ~L~~L~Ls~N~l~g~ip~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~~~L~~ 105 (707)
..+.|++++|+|+ .+|..+. .+|+.|+|++|+|++..|..|.++++|++|+|++|+|++..|..+..+++|+ +
T Consensus 10 ~~~~l~~s~n~l~-~ip~~~~-~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~-----~ 82 (170)
T 3g39_A 10 SGTTVDCSGKSLA-SVPTGIP-TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLT-----Q 82 (170)
T ss_dssp ETTEEECTTSCCS-SCCSCCC-TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCC-----E
T ss_pred CCCEEEeCCCCcC-ccCccCC-CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCC-----E
Confidence 4678999999999 8998775 3899999999999988899999999999999999999955555566766665 9
Q ss_pred EEccCccCCCCCCC-C-CCCCCceeeccCCCccccCC-cccccCCCCC
Q 005224 106 LDFQNNNLTNISGS-F-NIPPNVTVRLRGNPFCLNTN-AEQFCGSHSD 150 (707)
Q Consensus 106 l~l~~N~l~~~~~~-~-~~~~l~~l~l~~N~~~~~~~-~~~~~~~~~~ 150 (707)
|+|++|+|+++++. + .+++|+.|+|++|+|.|+|. +..+-.|...
T Consensus 83 L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~~l~~l~~~l~~ 130 (170)
T 3g39_A 83 LSLNDNQLKSIPRGAFDNLKSLTHIWLLNNPWDCACSDILYLSRWISQ 130 (170)
T ss_dssp EECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCTTBGGGHHHHHHHHH
T ss_pred EECCCCccCEeCHHHhcCCCCCCEEEeCCCCCCCCchhHHHHHHHHHh
Confidence 99999999999875 4 79999999999999999995 6666666543
No 288
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.58 E-value=2.5e-15 Score=142.24 Aligned_cols=128 Identities=24% Similarity=0.326 Sum_probs=109.6
Q ss_pred CCceEEEeeCCcCC-CCCC-CcCCCCcccEEeccCCcCcccCCCccccc-CccEEEccCccCCCCCCcccCCCcccceEe
Q 005224 2 SKLLKLSLRNCSLQ-GPMP-DLSRIPNLGYLDLSSNQLNGSIPPGRLSL-NITTIKLSNNKLTGTIPSNFSGLPRLQRLF 78 (707)
Q Consensus 2 ~~L~~L~L~~N~l~-~~~~-~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 78 (707)
++|+.|+|++|+++ +.+| .+..+++|++|+|++|.|+ .+ ..+..+ +|+.|+|++|++++.+|..+.++++|++|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~-~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLI-SV-SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCC-CC-SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCC-Ch-hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 57999999999999 5555 6899999999999999999 56 445444 899999999999987998888899999999
Q ss_pred ccCcccccCCC--CCccccccCCCCccceEEccCccCCCCCC----CC-CCCCCceeeccCCCccc
Q 005224 79 IANNSLSGSIP--SSIWQSRTLNATETFILDFQNNNLTNISG----SF-NIPPNVTVRLRGNPFCL 137 (707)
Q Consensus 79 ls~N~l~g~~p--~~~~~l~~L~~~~L~~l~l~~N~l~~~~~----~~-~~~~l~~l~l~~N~~~~ 137 (707)
|++|+|+ .+| ..+..+++|+ .|+|++|.+++++. .+ .+++|+.|++.+|++..
T Consensus 102 Ls~N~l~-~~~~~~~l~~l~~L~-----~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~~ 161 (168)
T 2ell_A 102 LSGNKLK-DISTLEPLKKLECLK-----SLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQE 161 (168)
T ss_dssp CBSSSCC-SSGGGGGGSSCSCCC-----EEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSCB
T ss_pred ccCCccC-cchhHHHHhcCCCCC-----EEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChhh
Confidence 9999999 554 5676666555 99999999999987 34 79999999999998743
No 289
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.58 E-value=3.6e-15 Score=145.13 Aligned_cols=128 Identities=19% Similarity=0.226 Sum_probs=91.3
Q ss_pred CCceEEEeeCCcCCCCCCCcCCCCcccEEeccCCcCcccCCCccccc-CccEEEccCccCCCCCCcccCCCcccceEecc
Q 005224 2 SKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSL-NITTIKLSNNKLTGTIPSNFSGLPRLQRLFIA 80 (707)
Q Consensus 2 ~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls 80 (707)
++|+.|+|++|+++.++ .+..+++|++|+|++|.++ .++ .+..+ +|++|+|++|++++..|..|+.+++|++|+|+
T Consensus 44 ~~L~~L~l~~n~i~~l~-~l~~l~~L~~L~l~~n~~~-~~~-~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls 120 (197)
T 4ezg_A 44 NSLTYITLANINVTDLT-GIEYAHNIKDLTINNIHAT-NYN-PISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDIS 120 (197)
T ss_dssp HTCCEEEEESSCCSCCT-TGGGCTTCSEEEEESCCCS-CCG-GGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECC
T ss_pred CCccEEeccCCCccChH-HHhcCCCCCEEEccCCCCC-cch-hhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEec
Confidence 46778888888887444 6777778888888888766 444 33333 78888888888877677777778888888888
Q ss_pred CcccccCCCCCccccccCCCCccceEEccCcc-CCCCCCCCCCCCCceeeccCCCccc
Q 005224 81 NNSLSGSIPSSIWQSRTLNATETFILDFQNNN-LTNISGSFNIPPNVTVRLRGNPFCL 137 (707)
Q Consensus 81 ~N~l~g~~p~~~~~l~~L~~~~L~~l~l~~N~-l~~~~~~~~~~~l~~l~l~~N~~~~ 137 (707)
+|++++..|..+..+++|+ .|+|++|+ ++.++....+++|+.|++++|++..
T Consensus 121 ~n~i~~~~~~~l~~l~~L~-----~L~L~~n~~i~~~~~l~~l~~L~~L~l~~n~i~~ 173 (197)
T 4ezg_A 121 HSAHDDSILTKINTLPKVN-----SIDLSYNGAITDIMPLKTLPELKSLNIQFDGVHD 173 (197)
T ss_dssp SSBCBGGGHHHHTTCSSCC-----EEECCSCTBCCCCGGGGGCSSCCEEECTTBCCCC
T ss_pred CCccCcHhHHHHhhCCCCC-----EEEccCCCCccccHhhcCCCCCCEEECCCCCCcC
Confidence 8888766666666655554 77888876 7777633367777777777777654
No 290
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.58 E-value=4.1e-15 Score=172.92 Aligned_cols=144 Identities=21% Similarity=0.230 Sum_probs=115.7
Q ss_pred CCCceEEEeeCCcCCCCCC-CcCCCCcccEEeccCCcCcccCCCc---------cccc-CccEEEccCccCCCCCCcccC
Q 005224 1 MSKLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQLNGSIPPG---------RLSL-NITTIKLSNNKLTGTIPSNFS 69 (707)
Q Consensus 1 L~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~g~ip~~---------~~~~-~L~~L~Ls~N~l~~~~p~~~~ 69 (707)
+++|+.|+|++|+|+++++ .|.++++|++|+|++|+|+ .++.. +..+ +|+.|+|++|+|+...+..|.
T Consensus 479 l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~-~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~ 557 (680)
T 1ziw_A 479 LRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLA-RLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFK 557 (680)
T ss_dssp CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCG-GGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTT
T ss_pred CCCCCEEECCCCCCCcCChhhhccccccCEEeCCCCCcc-ccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcc
Confidence 4678999999999998887 5888999999999999998 44321 2233 799999999999944445689
Q ss_pred CCcccceEeccCcccccCCCCCccccccCCCCccceEEccCccCCCCCCCC---CCCCCceeeccCCCccccCCc-cccc
Q 005224 70 GLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSF---NIPPNVTVRLRGNPFCLNTNA-EQFC 145 (707)
Q Consensus 70 ~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~~~L~~l~l~~N~l~~~~~~~---~~~~l~~l~l~~N~~~~~~~~-~~~~ 145 (707)
++++|+.|+|++|+|++..+..+..+++|+ .|+|++|+|+++++.. .+++++.|++++|||.|+|.. ..|-
T Consensus 558 ~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~-----~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c~~~~~~~ 632 (680)
T 1ziw_A 558 DLFELKIIDLGLNNLNTLPASVFNNQVSLK-----SLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCESIAWFV 632 (680)
T ss_dssp TCTTCCEEECCSSCCCCCCTTTTTTCTTCC-----EEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCCCCCSSEE
T ss_pred cccCcceeECCCCCCCcCCHhHhCCCCCCC-----EEECCCCcCCccChhHhcccccccCEEEccCCCcccCCccHHHHH
Confidence 999999999999999944444456665555 9999999999987753 478999999999999999996 8888
Q ss_pred CCCCC
Q 005224 146 GSHSD 150 (707)
Q Consensus 146 ~~~~~ 150 (707)
.|...
T Consensus 633 ~~~~~ 637 (680)
T 1ziw_A 633 NWINE 637 (680)
T ss_dssp CCSSC
T ss_pred HHHHh
Confidence 88754
No 291
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.58 E-value=1.5e-15 Score=170.69 Aligned_cols=142 Identities=20% Similarity=0.285 Sum_probs=94.1
Q ss_pred CCCceEEEeeCCcCCCCCC-CcCCCCcccEEeccCCcCcc--cCCCccccc-CccEEEccCccCCCCCCcc-cCCC----
Q 005224 1 MSKLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQLNG--SIPPGRLSL-NITTIKLSNNKLTGTIPSN-FSGL---- 71 (707)
Q Consensus 1 L~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~g--~ip~~~~~~-~L~~L~Ls~N~l~~~~p~~-~~~l---- 71 (707)
+++|++|+|++|++++..| .++.+++|++|+|++|+|++ .+|..+..+ +|+.|+|++|++++.+|.. |..+
T Consensus 323 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~ 402 (520)
T 2z7x_B 323 ISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLL 402 (520)
T ss_dssp CCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCC
T ss_pred CCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCC
Confidence 3566677777777766544 56666666666666666663 223323333 5555555555555434432 4433
Q ss_pred ------------------cccceEeccCcccccCCCCCccccccCCCCccceEEccCccCCCCCCC-C-CCCCCceeecc
Q 005224 72 ------------------PRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGS-F-NIPPNVTVRLR 131 (707)
Q Consensus 72 ------------------~~L~~L~ls~N~l~g~~p~~~~~l~~L~~~~L~~l~l~~N~l~~~~~~-~-~~~~l~~l~l~ 131 (707)
++|+.|+|++|+|+ .+|..+..+++ |++|+|++|+|+.+|.. + .+++|+.|+++
T Consensus 403 ~L~Ls~N~l~~~~~~~l~~~L~~L~Ls~N~l~-~ip~~~~~l~~-----L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~ 476 (520)
T 2z7x_B 403 SLNMSSNILTDTIFRCLPPRIKVLDLHSNKIK-SIPKQVVKLEA-----LQELNVASNQLKSVPDGIFDRLTSLQKIWLH 476 (520)
T ss_dssp EEECCSSCCCGGGGGSCCTTCCEEECCSSCCC-CCCGGGGGCTT-----CCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred EEECcCCCCCcchhhhhcccCCEEECCCCccc-ccchhhhcCCC-----CCEEECCCCcCCccCHHHhccCCcccEEECc
Confidence 45566666666665 66666655544 45999999999999886 4 78999999999
Q ss_pred CCCccccCCcccc-cCCC
Q 005224 132 GNPFCLNTNAEQF-CGSH 148 (707)
Q Consensus 132 ~N~~~~~~~~~~~-~~~~ 148 (707)
+|+|.|+|....+ -.|.
T Consensus 477 ~N~~~c~c~~~~~~~~~~ 494 (520)
T 2z7x_B 477 TNPWDCSCPRIDYLSRWL 494 (520)
T ss_dssp SSCBCCCHHHHHHHHHHH
T ss_pred CCCCcccCCchHHHHHHH
Confidence 9999999998887 5554
No 292
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.57 E-value=8.4e-15 Score=141.96 Aligned_cols=110 Identities=27% Similarity=0.366 Sum_probs=98.7
Q ss_pred CCceEEEeeCCcCCCCCCC--cCCCCcccEEeccCCcCcccCCCccccc-CccEEEccCccCCCCCCcccCCCcccceEe
Q 005224 2 SKLLKLSLRNCSLQGPMPD--LSRIPNLGYLDLSSNQLNGSIPPGRLSL-NITTIKLSNNKLTGTIPSNFSGLPRLQRLF 78 (707)
Q Consensus 2 ~~L~~L~L~~N~l~~~~~~--~~~l~~L~~L~Ls~N~l~g~ip~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 78 (707)
.+|+.|+|++|+|+++++. |..+++|++|+|++|+|++..|..+..+ +|+.|+|++|+|++..|..|.++++|++|+
T Consensus 29 ~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 108 (192)
T 1w8a_A 29 LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLN 108 (192)
T ss_dssp TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEE
T ss_pred CCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCCcCCccCHHHhcCCCCCCEEE
Confidence 3789999999999998873 8999999999999999995556666665 899999999999998888899999999999
Q ss_pred ccCcccccCCCCCccccccCCCCccceEEccCccCCCC
Q 005224 79 IANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNI 116 (707)
Q Consensus 79 ls~N~l~g~~p~~~~~l~~L~~~~L~~l~l~~N~l~~~ 116 (707)
|++|+|++.+|..+..+++|+ +|+|++|.++.-
T Consensus 109 L~~N~l~~~~~~~~~~l~~L~-----~L~L~~N~l~c~ 141 (192)
T 1w8a_A 109 LYDNQISCVMPGSFEHLNSLT-----SLNLASNPFNCN 141 (192)
T ss_dssp CCSSCCCEECTTSSTTCTTCC-----EEECTTCCBCCS
T ss_pred CCCCcCCeeCHHHhhcCCCCC-----EEEeCCCCccCc
Confidence 999999998899998876665 999999999863
No 293
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.57 E-value=1.6e-15 Score=173.78 Aligned_cols=144 Identities=20% Similarity=0.250 Sum_probs=114.9
Q ss_pred CCCceEEEeeCCcCCCCCC-CcCCCCcccEEeccCCcCccc-CC--Cccccc-CccEEEccCccCCCCCCcccCCCcccc
Q 005224 1 MSKLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQLNGS-IP--PGRLSL-NITTIKLSNNKLTGTIPSNFSGLPRLQ 75 (707)
Q Consensus 1 L~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~g~-ip--~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 75 (707)
+++|+.|+|++|.+++.++ .|..+++|++|+|++|++++. +| ..+..+ +|+.|+|++|++++..|..|.++++|+
T Consensus 424 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~ 503 (606)
T 3t6q_A 424 LHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMN 503 (606)
T ss_dssp CTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCC
T ss_pred cccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCC
Confidence 4577888888888887776 577788888888888888752 22 223333 788888888888888888888888999
Q ss_pred eEeccCcccccCCCCCccccccCCCCccceEEccCccCCCCCCCC--CCCCCceeeccCCCccccCCcccccCCCCC
Q 005224 76 RLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSF--NIPPNVTVRLRGNPFCLNTNAEQFCGSHSD 150 (707)
Q Consensus 76 ~L~ls~N~l~g~~p~~~~~l~~L~~~~L~~l~l~~N~l~~~~~~~--~~~~l~~l~l~~N~~~~~~~~~~~~~~~~~ 150 (707)
.|+|++|++++..|..+.+++ +| .|+|++|+++++++.. .+++|+.|++++|||.|+|....|..|...
T Consensus 504 ~L~Ls~N~l~~~~~~~l~~l~-----~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~~~~~~w~~~ 574 (606)
T 3t6q_A 504 HVDLSHNRLTSSSIEALSHLK-----GI-YLNLASNHISIILPSLLPILSQQRTINLRQNPLDCTCSNIYFLEWYKE 574 (606)
T ss_dssp EEECCSSCCCGGGGGGGTTCC-----SC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECSGGGHHHHHHHHH
T ss_pred EEECCCCccCcCChhHhCccc-----cc-EEECcCCcccccCHhhcccCCCCCEEeCCCCCccccCCcHHHHHHHHh
Confidence 999999998888887776654 44 7999999999987764 788999999999999999999888888754
No 294
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.57 E-value=5.8e-15 Score=157.97 Aligned_cols=130 Identities=25% Similarity=0.236 Sum_probs=111.1
Q ss_pred CCceEEEeeCCcCCCCCC-CcC-CCCcccEEeccCCcCcccCCCc-cccc-CccEEEccCccCCCCCCcccCCCcccceE
Q 005224 2 SKLLKLSLRNCSLQGPMP-DLS-RIPNLGYLDLSSNQLNGSIPPG-RLSL-NITTIKLSNNKLTGTIPSNFSGLPRLQRL 77 (707)
Q Consensus 2 ~~L~~L~L~~N~l~~~~~-~~~-~l~~L~~L~Ls~N~l~g~ip~~-~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 77 (707)
+.|+.|+|++|+|+++++ .|. ++++|++|+|++|+|+ .++.. +..+ +|+.|+|++|+|++..+..|.++++|+.|
T Consensus 39 ~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~-~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 117 (361)
T 2xot_A 39 SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLN-FISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVL 117 (361)
T ss_dssp TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCC-EECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEE
T ss_pred CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCC-ccChhhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEE
Confidence 358899999999999888 476 8999999999999999 66654 4444 89999999999997777789999999999
Q ss_pred eccCcccccCCCCCccccccCCCCccceEEccCccCCCCCCCC-----CCCCCceeeccCCCccc
Q 005224 78 FIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSF-----NIPPNVTVRLRGNPFCL 137 (707)
Q Consensus 78 ~ls~N~l~g~~p~~~~~l~~L~~~~L~~l~l~~N~l~~~~~~~-----~~~~l~~l~l~~N~~~~ 137 (707)
+|++|+|++..|..+..+++|+ .|+|++|+|+.+|... .+++|+.|+|++|++..
T Consensus 118 ~L~~N~i~~~~~~~~~~l~~L~-----~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 177 (361)
T 2xot_A 118 LLYNNHIVVVDRNAFEDMAQLQ-----KLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKK 177 (361)
T ss_dssp ECCSSCCCEECTTTTTTCTTCC-----EEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCC
T ss_pred ECCCCcccEECHHHhCCcccCC-----EEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCc
Confidence 9999999977788888776665 9999999999998764 48899999999999863
No 295
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.56 E-value=5.7e-15 Score=167.83 Aligned_cols=144 Identities=18% Similarity=0.275 Sum_probs=122.8
Q ss_pred CCCceEEEeeCCcCCCCCC--CcCCCCcccEEeccCCcCcccCCCccccc-CccEEEccCccCC-CCCCcccCCCcccce
Q 005224 1 MSKLLKLSLRNCSLQGPMP--DLSRIPNLGYLDLSSNQLNGSIPPGRLSL-NITTIKLSNNKLT-GTIPSNFSGLPRLQR 76 (707)
Q Consensus 1 L~~L~~L~L~~N~l~~~~~--~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~-~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~ 76 (707)
+++|+.|+|++|.+++.++ .+..+++|++|+|++|.+++.+|..+..+ +|+.|+|++|+++ +.+|..|..+++|+.
T Consensus 395 l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~ 474 (570)
T 2z63_A 395 LEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTF 474 (570)
T ss_dssp CTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCE
T ss_pred cCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCE
Confidence 4678899999999988776 58889999999999999996666655555 8999999999998 678999999999999
Q ss_pred EeccCcccccCCCCCccccccCCCCccceEEccCccCCCCCCCC--CCCCCceeeccCCCccccCCccccc-CCCC
Q 005224 77 LFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSF--NIPPNVTVRLRGNPFCLNTNAEQFC-GSHS 149 (707)
Q Consensus 77 L~ls~N~l~g~~p~~~~~l~~L~~~~L~~l~l~~N~l~~~~~~~--~~~~l~~l~l~~N~~~~~~~~~~~~-~~~~ 149 (707)
|+|++|++++..|..+..+++|+ .|+|++|+|+++++.. .+++|+.|++++|+|.|+|....+- .|..
T Consensus 475 L~l~~n~l~~~~~~~~~~l~~L~-----~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~wl~ 545 (570)
T 2z63_A 475 LDLSQCQLEQLSPTAFNSLSSLQ-----VLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRIDYLSRWLN 545 (570)
T ss_dssp EECTTSCCCEECTTTTTTCTTCC-----EEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTTHHHHHHHH
T ss_pred EECCCCccccCChhhhhcccCCC-----EEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCcchHHHHHHHH
Confidence 99999999988898888776665 9999999999997753 7899999999999999999876655 5543
No 296
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.56 E-value=6.5e-15 Score=169.31 Aligned_cols=131 Identities=24% Similarity=0.298 Sum_probs=114.2
Q ss_pred CCceEEEeeCCcCCCCCC-CcCCCCcccEEeccCCcCcccCCCcccc-c-CccEEEccCccCCCCCCcccCCCcccceEe
Q 005224 2 SKLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQLNGSIPPGRLS-L-NITTIKLSNNKLTGTIPSNFSGLPRLQRLF 78 (707)
Q Consensus 2 ~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~g~ip~~~~~-~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 78 (707)
+++++|||++|+|+++++ +|.++++|++|+|++|+|+ .||++.+. + +|++|+|++|+|++..+..|.+|++|++|+
T Consensus 52 ~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~-~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~ 130 (635)
T 4g8a_A 52 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQ-TIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLV 130 (635)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCC-EECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEE
T ss_pred cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCC-CcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEE
Confidence 368999999999999988 7999999999999999999 88876554 4 899999999999977777899999999999
Q ss_pred ccCcccccCCCCCccccccCCCCccceEEccCccCCCCC--CCC-CCCCCceeeccCCCcccc
Q 005224 79 IANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNIS--GSF-NIPPNVTVRLRGNPFCLN 138 (707)
Q Consensus 79 ls~N~l~g~~p~~~~~l~~L~~~~L~~l~l~~N~l~~~~--~~~-~~~~l~~l~l~~N~~~~~ 138 (707)
|++|+|++..+..+.++++|+ +|+|++|+|+.++ ..+ .+++|+.|++++|.+...
T Consensus 131 Ls~N~l~~l~~~~~~~L~~L~-----~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~ 188 (635)
T 4g8a_A 131 AVETNLASLENFPIGHLKTLK-----ELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSI 188 (635)
T ss_dssp CTTSCCCCSTTCCCTTCTTCC-----EEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEE
T ss_pred CCCCcCCCCChhhhhcCcccC-----eeccccCccccCCCchhhccchhhhhhcccCcccccc
Confidence 999999966566788777665 9999999999864 334 789999999999998654
No 297
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.55 E-value=1.9e-14 Score=148.56 Aligned_cols=131 Identities=24% Similarity=0.273 Sum_probs=104.5
Q ss_pred CCceEEEeeCCcCCCCCC-CcCCCCcccEEeccCCcCcccCCCccccc-CccEEEccCcc-CCCCCCcccCCCcccceEe
Q 005224 2 SKLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQLNGSIPPGRLSL-NITTIKLSNNK-LTGTIPSNFSGLPRLQRLF 78 (707)
Q Consensus 2 ~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~-~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~ 78 (707)
++|+.|+|++|+|+++++ .|..+++|++|+|++|.|++..|..+..+ +|++|+|++|+ ++...|..|.++++|++|+
T Consensus 32 ~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~ 111 (285)
T 1ozn_A 32 AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLH 111 (285)
T ss_dssp TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEE
T ss_pred CCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEE
Confidence 468889999999988877 58888899999999999884445555554 78999999987 7766678888888999999
Q ss_pred ccCcccccCCCCCccccccCCCCccceEEccCccCCCCCCC-C-CCCCCceeeccCCCccc
Q 005224 79 IANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGS-F-NIPPNVTVRLRGNPFCL 137 (707)
Q Consensus 79 ls~N~l~g~~p~~~~~l~~L~~~~L~~l~l~~N~l~~~~~~-~-~~~~l~~l~l~~N~~~~ 137 (707)
|++|++++..|..+..+++|+ +|+|++|+++.++.. + .+++|+.|++++|.+..
T Consensus 112 l~~n~l~~~~~~~~~~l~~L~-----~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 167 (285)
T 1ozn_A 112 LDRCGLQELGPGLFRGLAALQ-----YLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISS 167 (285)
T ss_dssp CTTSCCCCCCTTTTTTCTTCC-----EEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCE
T ss_pred CCCCcCCEECHhHhhCCcCCC-----EEECCCCcccccCHhHhccCCCccEEECCCCcccc
Confidence 999998876677777666555 888888888888765 3 68888888888888754
No 298
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.55 E-value=6.5e-15 Score=157.04 Aligned_cols=145 Identities=19% Similarity=0.304 Sum_probs=83.8
Q ss_pred CCceEEEeeCCcCCCCCCC-cCCCCcccEEeccCCcCcccCCC-ccc-cc-CccEEEccCc-cCCCCCCcccCCCcccce
Q 005224 2 SKLLKLSLRNCSLQGPMPD-LSRIPNLGYLDLSSNQLNGSIPP-GRL-SL-NITTIKLSNN-KLTGTIPSNFSGLPRLQR 76 (707)
Q Consensus 2 ~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~g~ip~-~~~-~~-~L~~L~Ls~N-~l~~~~p~~~~~l~~L~~ 76 (707)
++|++|+|++|+|+++++. |.++++|++|+|++|+++ .+|. ..+ .+ +|+.|+|++| .+++..|..|.++++|+.
T Consensus 100 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~ 178 (353)
T 2z80_A 100 GSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYK-TLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEE 178 (353)
T ss_dssp TTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCS-SSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEE
T ss_pred CCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCc-ccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCE
Confidence 4556666666666655543 555666666666666666 5554 222 22 5555555555 344444455555556666
Q ss_pred EeccCcccccCCCCCccccccC----------------------------------------------------------
Q 005224 77 LFIANNSLSGSIPSSIWQSRTL---------------------------------------------------------- 98 (707)
Q Consensus 77 L~ls~N~l~g~~p~~~~~l~~L---------------------------------------------------------- 98 (707)
|++++|++++..|..+..+++|
T Consensus 179 L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~ 258 (353)
T 2z80_A 179 LEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRN 258 (353)
T ss_dssp EEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCCCCEEEEES
T ss_pred EECCCCCcCccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCccccccccccccccccchhhcccccc
Confidence 6666666555445444433221
Q ss_pred ----------------CCCccceEEccCccCCCCCCCC--CCCCCceeeccCCCccccCC-cccccCC
Q 005224 99 ----------------NATETFILDFQNNNLTNISGSF--NIPPNVTVRLRGNPFCLNTN-AEQFCGS 147 (707)
Q Consensus 99 ----------------~~~~L~~l~l~~N~l~~~~~~~--~~~~l~~l~l~~N~~~~~~~-~~~~~~~ 147 (707)
.+++|+.|+|++|+|+.+|..+ .+++|+.|++++|+|.|+|. +..+-.|
T Consensus 259 ~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~~~~~~~~l~~l~~~ 326 (353)
T 2z80_A 259 VKITDESLFQVMKLLNQISGLLELEFSRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRIDYLSRW 326 (353)
T ss_dssp CBCCHHHHHHHHHHHHTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCHHHHHHHHHH
T ss_pred ccccCcchhhhHHHHhcccCCCEEECCCCCCCccCHHHHhcCCCCCEEEeeCCCccCcCCCcHHHHHH
Confidence 1235667777777777777653 67778888888888888775 4344333
No 299
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.55 E-value=4e-15 Score=165.67 Aligned_cols=129 Identities=19% Similarity=0.176 Sum_probs=76.9
Q ss_pred CCceEEEeeCCcCCCCCC-CcCCCCcccEEeccCCcCcccCCCccc-cc-CccEEEccCccCCCCCCcccCCCcccceEe
Q 005224 2 SKLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQLNGSIPPGRL-SL-NITTIKLSNNKLTGTIPSNFSGLPRLQRLF 78 (707)
Q Consensus 2 ~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~g~ip~~~~-~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 78 (707)
++|+.|+|++|+|++.+| .|+.+++|++|+|++|.|++.+|..+. .+ +|+.|+|++|+|++. |. +..+++|+.|+
T Consensus 120 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~L~ 197 (487)
T 3oja_A 120 QGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KG-QVVFAKLKTLD 197 (487)
T ss_dssp SSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-EC-CCCCTTCCEEE
T ss_pred CCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccc-cc-cccCCCCCEEE
Confidence 456666666666666555 566666666666666666655555444 22 566666666666644 22 33466666666
Q ss_pred ccCcccccCCCCCccccccCCCCccceEEccCccCCCCCCCC-CCCCCceeeccCCCcccc
Q 005224 79 IANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSF-NIPPNVTVRLRGNPFCLN 138 (707)
Q Consensus 79 ls~N~l~g~~p~~~~~l~~L~~~~L~~l~l~~N~l~~~~~~~-~~~~l~~l~l~~N~~~~~ 138 (707)
|++|+|++ +|..+..+++|+ .|+|++|+|+++|..+ .+++|..|++++|++.|.
T Consensus 198 Ls~N~l~~-~~~~~~~l~~L~-----~L~Ls~N~l~~lp~~l~~l~~L~~L~l~~N~l~c~ 252 (487)
T 3oja_A 198 LSSNKLAF-MGPEFQSAAGVT-----WISLRNNKLVLIEKALRFSQNLEHFDLRGNGFHCG 252 (487)
T ss_dssp CCSSCCCE-ECGGGGGGTTCS-----EEECTTSCCCEECTTCCCCTTCCEEECTTCCBCHH
T ss_pred CCCCCCCC-CCHhHcCCCCcc-----EEEecCCcCcccchhhccCCCCCEEEcCCCCCcCc
Confidence 66666663 343455544443 6666666666666655 556666666666666554
No 300
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.55 E-value=2e-14 Score=136.95 Aligned_cols=115 Identities=23% Similarity=0.318 Sum_probs=97.7
Q ss_pred ccEEeccCCcCcccCCCcccccCccEEEccCccCCCCCCcccCCCcccceEeccCcccccCCCCCccccccCCCCccceE
Q 005224 27 LGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFIL 106 (707)
Q Consensus 27 L~~L~Ls~N~l~g~ip~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~~~L~~l 106 (707)
-+.+++++|+|+ .+|..+. .+|+.|+|++|+|++..|..|.++++|++|+|++|+|++..+..+..+++|+ +|
T Consensus 14 ~~~l~~~~n~l~-~iP~~~~-~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~-----~L 86 (174)
T 2r9u_A 14 QTLVNCQNIRLA-SVPAGIP-TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLT-----QL 86 (174)
T ss_dssp SSEEECCSSCCS-SCCSCCC-TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCC-----EE
T ss_pred CcEEEeCCCCCC-ccCCCcC-CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhh-----EE
Confidence 478999999998 9998776 4899999999999988899999999999999999999954444456666655 99
Q ss_pred EccCccCCCCCCC-C-CCCCCceeeccCCCccccCC-cccccCCC
Q 005224 107 DFQNNNLTNISGS-F-NIPPNVTVRLRGNPFCLNTN-AEQFCGSH 148 (707)
Q Consensus 107 ~l~~N~l~~~~~~-~-~~~~l~~l~l~~N~~~~~~~-~~~~~~~~ 148 (707)
+|++|+|+++++. + .+++|+.|+|++|+|.|+|. +..+-.|.
T Consensus 87 ~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~~~c~~~~~~~l~~~~ 131 (174)
T 2r9u_A 87 DLNDNHLKSIPRGAFDNLKSLTHIYLYNNPWDCECRDIMYLRNWV 131 (174)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCSEEECCSSCBCTTBGGGHHHHHHH
T ss_pred ECCCCccceeCHHHhccccCCCEEEeCCCCcccccccHHHHHHHH
Confidence 9999999999886 4 79999999999999999986 44454444
No 301
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.54 E-value=6.2e-15 Score=154.81 Aligned_cols=132 Identities=18% Similarity=0.166 Sum_probs=102.7
Q ss_pred CCCceEEEeeCCcCCCCCC-CcCCCCcccEEeccCCcCcccCCCcccc-c-CccEEEccCccCCCCCCcccCCCcccceE
Q 005224 1 MSKLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQLNGSIPPGRLS-L-NITTIKLSNNKLTGTIPSNFSGLPRLQRL 77 (707)
Q Consensus 1 L~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~g~ip~~~~~-~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 77 (707)
+++|+.|+|++|++++.++ .+..+++|++|+|++|.|++..|..+.. + +|++|+|++|+|++. |. ...+++|++|
T Consensus 119 ~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~-~~~l~~L~~L 196 (317)
T 3o53_A 119 GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KG-QVVFAKLKTL 196 (317)
T ss_dssp CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-EC-CCCCTTCCEE
T ss_pred cCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccc-cc-ccccccCCEE
Confidence 3568888888888888777 6888888999999999988544454442 3 789999999998854 33 3358889999
Q ss_pred eccCcccccCCCCCccccccCCCCccceEEccCccCCCCCCCC-CCCCCceeeccCCCccccCC
Q 005224 78 FIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSF-NIPPNVTVRLRGNPFCLNTN 140 (707)
Q Consensus 78 ~ls~N~l~g~~p~~~~~l~~L~~~~L~~l~l~~N~l~~~~~~~-~~~~l~~l~l~~N~~~~~~~ 140 (707)
+|++|+|+ .+|..+..+++|+ .|+|++|+|+.+|..+ .+++|+.|++++|+|.|.+.
T Consensus 197 ~Ls~N~l~-~l~~~~~~l~~L~-----~L~L~~N~l~~l~~~~~~l~~L~~L~l~~N~~~~~~~ 254 (317)
T 3o53_A 197 DLSSNKLA-FMGPEFQSAAGVT-----WISLRNNKLVLIEKALRFSQNLEHFDLRGNGFHCGTL 254 (317)
T ss_dssp ECCSSCCC-EECGGGGGGTTCS-----EEECTTSCCCEECTTCCCCTTCCEEECTTCCCBHHHH
T ss_pred ECCCCcCC-cchhhhcccCccc-----EEECcCCcccchhhHhhcCCCCCEEEccCCCccCcCH
Confidence 99999998 5666677666555 8999999999888777 77889999999999887653
No 302
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.54 E-value=2.2e-14 Score=162.39 Aligned_cols=128 Identities=20% Similarity=0.329 Sum_probs=93.3
Q ss_pred CCCceEEEeeCCcCCCCCCCcCCCCcccEEeccCCcCcccCCCcccccCccEEEccCccCCCCCCcccCCCcccceEecc
Q 005224 1 MSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIA 80 (707)
Q Consensus 1 L~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls 80 (707)
|++|+.|+|++|+|++++..+..+++|++|+|++|+|+ .+|..+.. +|+.|+|++|+|++.+ ..+++|++|+|+
T Consensus 386 l~~L~~L~Ls~N~l~~lp~~~~~~~~L~~L~Ls~N~l~-~l~~~~~~-~L~~L~Ls~N~l~~~~----~~l~~L~~L~Ls 459 (549)
T 2z81_A 386 LKNLTSLDISRNTFHPMPDSCQWPEKMRFLNLSSTGIR-VVKTCIPQ-TLEVLDVSNNNLDSFS----LFLPRLQELYIS 459 (549)
T ss_dssp CTTCCEEECTTCCCCCCCSCCCCCTTCCEEECTTSCCS-CCCTTSCT-TCSEEECCSSCCSCCC----CCCTTCCEEECC
T ss_pred CCCCCEEECCCCCCccCChhhcccccccEEECCCCCcc-cccchhcC-CceEEECCCCChhhhc----ccCChhcEEECC
Confidence 34566666666666654445666666666666666666 55554432 6677777777776432 478899999999
Q ss_pred CcccccCCCCCccccccCCCCccceEEccCccCCCCCCC-C-CCCCCceeeccCCCccccCCc
Q 005224 81 NNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGS-F-NIPPNVTVRLRGNPFCLNTNA 141 (707)
Q Consensus 81 ~N~l~g~~p~~~~~l~~L~~~~L~~l~l~~N~l~~~~~~-~-~~~~l~~l~l~~N~~~~~~~~ 141 (707)
+|+|+ .+|. ...++ +|++|+|++|+|+++++. + .+++|+.|++++|+|.|+|..
T Consensus 460 ~N~l~-~ip~-~~~l~-----~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 515 (549)
T 2z81_A 460 RNKLK-TLPD-ASLFP-----VLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 515 (549)
T ss_dssp SSCCS-SCCC-GGGCT-----TCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCCHHH
T ss_pred CCccC-cCCC-cccCc-----cCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCCCcc
Confidence 99998 8887 34444 455999999999999876 3 899999999999999999973
No 303
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.54 E-value=1.9e-14 Score=146.84 Aligned_cols=122 Identities=26% Similarity=0.358 Sum_probs=56.0
Q ss_pred CCceEEEeeCCcCCCCCCCcCCCCcccEEeccCCcCcccCCCccccc-CccEEEccCccCCCCCCcccCCCcccceEecc
Q 005224 2 SKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSL-NITTIKLSNNKLTGTIPSNFSGLPRLQRLFIA 80 (707)
Q Consensus 2 ~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls 80 (707)
++|+.|+|++|+|+.++ .+..+++|++|+|++|+|+ .+|. +..+ +|+.|+|++|+|++ +|... . ++|+.|+|+
T Consensus 41 ~~L~~L~l~~n~i~~l~-~l~~l~~L~~L~L~~N~i~-~~~~-l~~l~~L~~L~L~~N~l~~-l~~~~-~-~~L~~L~L~ 114 (263)
T 1xeu_A 41 SGVQNFNGDNSNIQSLA-GMQFFTNLKELHLSHNQIS-DLSP-LKDLTKLEELSVNRNRLKN-LNGIP-S-ACLSRLFLD 114 (263)
T ss_dssp TTCSEEECTTSCCCCCT-TGGGCTTCCEEECCSSCCC-CCGG-GTTCSSCCEEECCSSCCSC-CTTCC-C-SSCCEEECC
T ss_pred CcCcEEECcCCCcccch-HHhhCCCCCEEECCCCccC-CChh-hccCCCCCEEECCCCccCC-cCccc-c-CcccEEEcc
Confidence 34555555555555332 4555555555555555555 3433 2222 45555555555552 33211 1 455555555
Q ss_pred CcccccCCCCCccccccCCCCccceEEccCccCCCCCCCCCCCCCceeeccCCCcc
Q 005224 81 NNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSFNIPPNVTVRLRGNPFC 136 (707)
Q Consensus 81 ~N~l~g~~p~~~~~l~~L~~~~L~~l~l~~N~l~~~~~~~~~~~l~~l~l~~N~~~ 136 (707)
+|++++ +| .+..+++|+ .|+|++|+|++++....+++|+.|++++|++.
T Consensus 115 ~N~l~~-~~-~l~~l~~L~-----~L~Ls~N~i~~~~~l~~l~~L~~L~L~~N~i~ 163 (263)
T 1xeu_A 115 NNELRD-TD-SLIHLKNLE-----ILSIRNNKLKSIVMLGFLSKLEVLDLHGNEIT 163 (263)
T ss_dssp SSCCSB-SG-GGTTCTTCC-----EEECTTSCCCBCGGGGGCTTCCEEECTTSCCC
T ss_pred CCccCC-Ch-hhcCccccc-----EEECCCCcCCCChHHccCCCCCEEECCCCcCc
Confidence 555542 22 233333222 45555555555432224445555555555443
No 304
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.54 E-value=7e-15 Score=163.49 Aligned_cols=142 Identities=21% Similarity=0.254 Sum_probs=104.7
Q ss_pred CCCceEEEeeCCcCCCCCC-CcCCCCcccEEeccCCcCcc-----------------------cCCCccc-cc-CccEEE
Q 005224 1 MSKLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQLNG-----------------------SIPPGRL-SL-NITTIK 54 (707)
Q Consensus 1 L~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~g-----------------------~ip~~~~-~~-~L~~L~ 54 (707)
+++|+.|+|++|+++++.+ .|..+++|++|+|++|.+.+ .+|...+ .+ +|+.|+
T Consensus 175 l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 254 (477)
T 2id5_A 175 LHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLN 254 (477)
T ss_dssp CTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTCCEEE
T ss_pred cCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccccCHHHhcCccccCeeE
Confidence 4577888888888877666 56666666665555544443 4443222 22 677777
Q ss_pred ccCccCCCCCCcccCCCcccceEeccCcccccCCCCCccccccCCCCccceEEccCccCCCCCCCC--CCCCCceeeccC
Q 005224 55 LSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSF--NIPPNVTVRLRG 132 (707)
Q Consensus 55 Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~~~L~~l~l~~N~l~~~~~~~--~~~~l~~l~l~~ 132 (707)
|++|+|++..+..|.++++|+.|+|++|++++..|..+..+++|+ .|+|++|+|+++++.. .+++|+.|++++
T Consensus 255 Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~-----~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~ 329 (477)
T 2id5_A 255 LSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLR-----VLNVSGNQLTTLEESVFHSVGNLETLILDS 329 (477)
T ss_dssp CCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCC-----EEECCSSCCSCCCGGGBSCGGGCCEEECCS
T ss_pred CCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCC-----EEECCCCcCceeCHhHcCCCcccCEEEccC
Confidence 777777766666777788888888888888877777777666555 9999999999998754 788999999999
Q ss_pred CCccccCCcccccCC
Q 005224 133 NPFCLNTNAEQFCGS 147 (707)
Q Consensus 133 N~~~~~~~~~~~~~~ 147 (707)
|+|.|+|.+..+-.+
T Consensus 330 N~l~c~c~~~~~~~~ 344 (477)
T 2id5_A 330 NPLACDCRLLWVFRR 344 (477)
T ss_dssp SCEECSGGGHHHHTT
T ss_pred CCccCccchHhHHhh
Confidence 999999998766554
No 305
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.53 E-value=1.5e-14 Score=141.92 Aligned_cols=127 Identities=24% Similarity=0.285 Sum_probs=108.4
Q ss_pred CCCceEEEeeCCcCCCCCC-CcCCCCcccEEeccCCcCcccCCCccc-cc-CccEEEccCccCCCCCCcccCCCcccceE
Q 005224 1 MSKLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQLNGSIPPGRL-SL-NITTIKLSNNKLTGTIPSNFSGLPRLQRL 77 (707)
Q Consensus 1 L~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~g~ip~~~~-~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 77 (707)
+++|++|+|++|+|+++++ .|..+++|++|+|++|+|+ .+|...+ .+ +|++|+|++|+|++..+..|.++++|++|
T Consensus 51 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 129 (208)
T 2o6s_A 51 LTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQ-SLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDL 129 (208)
T ss_dssp CTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred cccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCC-ccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEE
Confidence 4789999999999998887 5899999999999999999 7777654 34 89999999999997777779999999999
Q ss_pred eccCcccccCCCCCccccccCCCCccceEEccCccCCCCCCCCCCCCCceeeccCCCcccc
Q 005224 78 FIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSFNIPPNVTVRLRGNPFCLN 138 (707)
Q Consensus 78 ~ls~N~l~g~~p~~~~~l~~L~~~~L~~l~l~~N~l~~~~~~~~~~~l~~l~l~~N~~~~~ 138 (707)
+|++|++++..+..+..+++|+ .|+|++|.+.+ .+++++.|++..|.+...
T Consensus 130 ~l~~N~l~~~~~~~~~~l~~L~-----~L~l~~N~~~~-----~~~~l~~L~~~~n~~~g~ 180 (208)
T 2o6s_A 130 RLYQNQLKSVPDGVFDRLTSLQ-----YIWLHDNPWDC-----TCPGIRYLSEWINKHSGV 180 (208)
T ss_dssp ECCSSCCSCCCTTTTTTCTTCC-----EEECCSCCBCC-----CTTTTHHHHHHHHHCTTT
T ss_pred ECCCCccceeCHHHhccCCCcc-----EEEecCCCeec-----CCCCHHHHHHHHHhCCce
Confidence 9999999965555577666665 99999998876 467889999988887643
No 306
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.53 E-value=5.5e-15 Score=136.88 Aligned_cols=124 Identities=22% Similarity=0.299 Sum_probs=103.3
Q ss_pred CCceEEEeeCCcCC-CCCC-CcCCCCcccEEeccCCcCcccCCCccccc-CccEEEccCccCCCCCCcccCCCcccceEe
Q 005224 2 SKLLKLSLRNCSLQ-GPMP-DLSRIPNLGYLDLSSNQLNGSIPPGRLSL-NITTIKLSNNKLTGTIPSNFSGLPRLQRLF 78 (707)
Q Consensus 2 ~~L~~L~L~~N~l~-~~~~-~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 78 (707)
++|+.|+|++|+++ +.+| .+..+++|++|+|++|.|+ .+ ..+..+ +|+.|+|++|+|++.+|..+.++++|++|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~-~~-~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLT-SI-ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCC-CC-TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCC-Cc-hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 46899999999999 5555 6899999999999999999 55 444444 899999999999987898888899999999
Q ss_pred ccCcccccC-CCCCccccccCCCCccceEEccCccCCCCCC----CC-CCCCCceeeccC
Q 005224 79 IANNSLSGS-IPSSIWQSRTLNATETFILDFQNNNLTNISG----SF-NIPPNVTVRLRG 132 (707)
Q Consensus 79 ls~N~l~g~-~p~~~~~l~~L~~~~L~~l~l~~N~l~~~~~----~~-~~~~l~~l~l~~ 132 (707)
|++|++++. .|..+..+++|+ .|++++|+++++++ .+ .+++|+.|++++
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~-----~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLK-----SLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCC-----EEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred CCCCcCCChHHHHHHhhCCCCC-----EEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 999999952 337777766665 99999999999987 23 788999888753
No 307
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.53 E-value=1e-14 Score=142.00 Aligned_cols=128 Identities=16% Similarity=0.246 Sum_probs=109.6
Q ss_pred CCCceEEEeeCCcCCCCCCCcCCCCcccEEeccCCcCcccCCCccccc-CccEEEccCccCCCCCCcccCCCcccceEec
Q 005224 1 MSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSL-NITTIKLSNNKLTGTIPSNFSGLPRLQRLFI 79 (707)
Q Consensus 1 L~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 79 (707)
+++|++|+|++|.++.. +.+..+++|++|+|++|++++..|..+..+ +|++|+|++|++++..|..|..+++|++|+|
T Consensus 65 l~~L~~L~l~~n~~~~~-~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L 143 (197)
T 4ezg_A 65 AHNIKDLTINNIHATNY-NPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDL 143 (197)
T ss_dssp CTTCSEEEEESCCCSCC-GGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCCEEEC
T ss_pred CCCCCEEEccCCCCCcc-hhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEecCCccCcHhHHHHhhCCCCCEEEc
Confidence 57899999999987643 478999999999999999997677777766 8999999999999888999999999999999
Q ss_pred cCcc-cccCCCCCccccccCCCCccceEEccCccCCCCCCCCCCCCCceeeccCCCcc
Q 005224 80 ANNS-LSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSFNIPPNVTVRLRGNPFC 136 (707)
Q Consensus 80 s~N~-l~g~~p~~~~~l~~L~~~~L~~l~l~~N~l~~~~~~~~~~~l~~l~l~~N~~~ 136 (707)
++|. ++ .+| .+..+++|+ .|+|++|+++.++....+++|+.|++++|++.
T Consensus 144 ~~n~~i~-~~~-~l~~l~~L~-----~L~l~~n~i~~~~~l~~l~~L~~L~l~~N~i~ 194 (197)
T 4ezg_A 144 SYNGAIT-DIM-PLKTLPELK-----SLNIQFDGVHDYRGIEDFPKLNQLYAFSQTIG 194 (197)
T ss_dssp CSCTBCC-CCG-GGGGCSSCC-----EEECTTBCCCCCTTGGGCSSCCEEEECBC---
T ss_pred cCCCCcc-ccH-hhcCCCCCC-----EEECCCCCCcChHHhccCCCCCEEEeeCcccC
Confidence 9998 65 777 577766655 99999999999884448999999999999973
No 308
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.53 E-value=1.6e-14 Score=143.18 Aligned_cols=109 Identities=19% Similarity=0.314 Sum_probs=98.8
Q ss_pred CCCceEEEeeCCcCCCCCC-CcCCCCcccEEeccCCcCcccCCCccc-cc-CccEEEccCccCCCCCCcccCCCcccceE
Q 005224 1 MSKLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQLNGSIPPGRL-SL-NITTIKLSNNKLTGTIPSNFSGLPRLQRL 77 (707)
Q Consensus 1 L~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~g~ip~~~~-~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 77 (707)
|++|+.|+|++|+|+++++ .|.++++|++|+|++|+|+ .+|...+ .+ +|+.|+|++|+|++..|..|.++++|+.|
T Consensus 56 l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 134 (220)
T 2v70_A 56 LPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLE-NVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLL 134 (220)
T ss_dssp CTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCC-CCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEE
T ss_pred CCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCCccC-ccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEE
Confidence 5789999999999999988 7999999999999999999 6776544 44 89999999999999889999999999999
Q ss_pred eccCcccccCCCCCccccccCCCCccceEEccCccCCC
Q 005224 78 FIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTN 115 (707)
Q Consensus 78 ~ls~N~l~g~~p~~~~~l~~L~~~~L~~l~l~~N~l~~ 115 (707)
+|++|+|++..|..+..+++|+ .|+|++|.++.
T Consensus 135 ~L~~N~l~~~~~~~~~~l~~L~-----~L~L~~N~l~c 167 (220)
T 2v70_A 135 SLYDNQITTVAPGAFDTLHSLS-----TLNLLANPFNC 167 (220)
T ss_dssp ECTTSCCCCBCTTTTTTCTTCC-----EEECCSCCEEC
T ss_pred ECCCCcCCEECHHHhcCCCCCC-----EEEecCcCCcC
Confidence 9999999988899898877665 99999999986
No 309
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.53 E-value=2.2e-14 Score=147.34 Aligned_cols=130 Identities=25% Similarity=0.307 Sum_probs=112.7
Q ss_pred CCceEEEeeCCcCCCCCC-CcCCCCcccEEeccCCcCcccCCCc-cccc-CccEEEccCccCCCCCCcccCCCcccceEe
Q 005224 2 SKLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQLNGSIPPG-RLSL-NITTIKLSNNKLTGTIPSNFSGLPRLQRLF 78 (707)
Q Consensus 2 ~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~g~ip~~-~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 78 (707)
++|++|+|++|+|+++++ .|.++++|++|+|++|+++ .++.. +..+ +|++|+|++|+|++..+..|.++++|++|+
T Consensus 28 ~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 106 (276)
T 2z62_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQ-TIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLV 106 (276)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCC-EECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEE
T ss_pred CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCC-ccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEE
Confidence 369999999999999888 7999999999999999999 66664 4444 899999999999988889999999999999
Q ss_pred ccCcccccCCCCCccccccCCCCccceEEccCccCCCC--CCCC-CCCCCceeeccCCCccc
Q 005224 79 IANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNI--SGSF-NIPPNVTVRLRGNPFCL 137 (707)
Q Consensus 79 ls~N~l~g~~p~~~~~l~~L~~~~L~~l~l~~N~l~~~--~~~~-~~~~l~~l~l~~N~~~~ 137 (707)
+++|++++..+..+..+++|+ +|+|++|+++.+ |..+ .+++|+.|++++|.+..
T Consensus 107 l~~n~l~~~~~~~~~~l~~L~-----~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~ 163 (276)
T 2z62_A 107 AVETNLASLENFPIGHLKTLK-----ELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQS 163 (276)
T ss_dssp CTTSCCCCSTTCCCTTCTTCC-----EEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCE
T ss_pred CCCCCccccCchhcccCCCCC-----EEECcCCccceecCchhhccCCCCCEEECCCCCCCc
Confidence 999999966666777766665 999999999984 5555 78999999999998854
No 310
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.53 E-value=5e-14 Score=140.52 Aligned_cols=127 Identities=20% Similarity=0.141 Sum_probs=107.8
Q ss_pred ceEEEeeCCcCCCCCCCcCCCCcccEEeccCCcCcccCCCccccc-CccEEEccCccCCCCCCcccCCCcccceEeccCc
Q 005224 4 LLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSL-NITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANN 82 (707)
Q Consensus 4 L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N 82 (707)
.+.++.++|+++.++..+. ++|++|+|++|+|++..|..+..+ +|+.|+|++|+|+...+..|.++++|+.|+|++|
T Consensus 21 ~~~v~c~~~~l~~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N 98 (229)
T 3e6j_A 21 GTTVDCRSKRHASVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTN 98 (229)
T ss_dssp TTEEECTTSCCSSCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CCEeEccCCCcCccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCC
Confidence 3578999999998887654 899999999999995445555555 8999999999999666677899999999999999
Q ss_pred ccccCCCCCccccccCCCCccceEEccCccCCCCCCCC-CCCCCceeeccCCCccc
Q 005224 83 SLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSF-NIPPNVTVRLRGNPFCL 137 (707)
Q Consensus 83 ~l~g~~p~~~~~l~~L~~~~L~~l~l~~N~l~~~~~~~-~~~~l~~l~l~~N~~~~ 137 (707)
+|++..+..+..+++|+ .|+|++|+|+.+|..+ .+++|+.|+|++|.+..
T Consensus 99 ~l~~l~~~~~~~l~~L~-----~L~Ls~N~l~~lp~~~~~l~~L~~L~L~~N~l~~ 149 (229)
T 3e6j_A 99 QLTVLPSAVFDRLVHLK-----ELFMCCNKLTELPRGIERLTHLTHLALDQNQLKS 149 (229)
T ss_dssp CCCCCCTTTTTTCTTCC-----EEECCSSCCCSCCTTGGGCTTCSEEECCSSCCCC
T ss_pred cCCccChhHhCcchhhC-----eEeccCCcccccCcccccCCCCCEEECCCCcCCc
Confidence 99955555567666665 9999999999998887 89999999999999864
No 311
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.53 E-value=1.9e-14 Score=150.07 Aligned_cols=131 Identities=23% Similarity=0.316 Sum_probs=87.9
Q ss_pred CCCceEEEeeCCcCCCCCCCcCCCCcccEEeccCCcCcccCCC--ccccc-CccEEEccCccCCCCCCcccCCCcccceE
Q 005224 1 MSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPP--GRLSL-NITTIKLSNNKLTGTIPSNFSGLPRLQRL 77 (707)
Q Consensus 1 L~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~ip~--~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 77 (707)
+++|++|+|++|.++.+++.+..+++|++|+|++|+++ .++. .+..+ +|++|+|++|++++..|..|.++++|++|
T Consensus 77 ~~~L~~L~Ls~n~i~~l~~~~~~l~~L~~L~l~~n~l~-~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 155 (306)
T 2z66_A 77 TTSLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLK-QMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVL 155 (306)
T ss_dssp CSCCCEEECCSCSEEEEEEEEETCTTCCEEECTTSEEE-SSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEE
T ss_pred ccccCEEECCCCccccChhhcCCCCCCCEEECCCCccc-ccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEE
Confidence 35677777777777765556777777777777777777 4543 23333 67777777777776667777777777777
Q ss_pred eccCccccc-CCCCCccccccCCCCccceEEccCccCCCCCC-CC-CCCCCceeeccCCCccc
Q 005224 78 FIANNSLSG-SIPSSIWQSRTLNATETFILDFQNNNLTNISG-SF-NIPPNVTVRLRGNPFCL 137 (707)
Q Consensus 78 ~ls~N~l~g-~~p~~~~~l~~L~~~~L~~l~l~~N~l~~~~~-~~-~~~~l~~l~l~~N~~~~ 137 (707)
+|++|.+++ .+|..+..+++|+ .|+|++|+|+++++ .+ .+++|+.|++++|.+..
T Consensus 156 ~l~~n~l~~~~~~~~~~~l~~L~-----~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 213 (306)
T 2z66_A 156 KMAGNSFQENFLPDIFTELRNLT-----FLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFS 213 (306)
T ss_dssp ECTTCEEGGGEECSCCTTCTTCC-----EEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSB
T ss_pred ECCCCccccccchhHHhhCcCCC-----EEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCc
Confidence 777777765 4666666655444 77777777777643 33 56777777777777654
No 312
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.52 E-value=9.8e-15 Score=139.34 Aligned_cols=127 Identities=20% Similarity=0.272 Sum_probs=102.5
Q ss_pred CCCceEEEeeCCcCCCCCCCcCCCC-cccEEeccCCcCcccCCCccccc-CccEEEccCccCCCCCCcccCCCcccceEe
Q 005224 1 MSKLLKLSLRNCSLQGPMPDLSRIP-NLGYLDLSSNQLNGSIPPGRLSL-NITTIKLSNNKLTGTIPSNFSGLPRLQRLF 78 (707)
Q Consensus 1 L~~L~~L~L~~N~l~~~~~~~~~l~-~L~~L~Ls~N~l~g~ip~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 78 (707)
+.+|+.|+|++|+|+.+ +.+..+. +|++|+|++|.|+ .+ ..+..+ +|+.|+|++|+|++..+..|..+++|++|+
T Consensus 18 ~~~L~~L~l~~n~l~~i-~~~~~~~~~L~~L~Ls~N~l~-~~-~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 94 (176)
T 1a9n_A 18 AVRDRELDLRGYKIPVI-ENLGATLDQFDAIDFSDNEIR-KL-DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELI 94 (176)
T ss_dssp TTSCEEEECTTSCCCSC-CCGGGGTTCCSEEECCSSCCC-EE-CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEE
T ss_pred cCCceEEEeeCCCCchh-HHhhhcCCCCCEEECCCCCCC-cc-cccccCCCCCEEECCCCcccccCcchhhcCCCCCEEE
Confidence 35789999999999966 6666665 9999999999999 56 444444 899999999999965445568999999999
Q ss_pred ccCcccccCCCC--CccccccCCCCccceEEccCccCCCCCCC----C-CCCCCceeeccCCCcc
Q 005224 79 IANNSLSGSIPS--SIWQSRTLNATETFILDFQNNNLTNISGS----F-NIPPNVTVRLRGNPFC 136 (707)
Q Consensus 79 ls~N~l~g~~p~--~~~~l~~L~~~~L~~l~l~~N~l~~~~~~----~-~~~~l~~l~l~~N~~~ 136 (707)
|++|+|+ .+|. .+..+++|+ .|+|++|.++.++.. + .+++|+.|++++|+..
T Consensus 95 L~~N~i~-~~~~~~~l~~l~~L~-----~L~l~~N~i~~~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 95 LTNNSLV-ELGDLDPLASLKSLT-----YLCILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp CCSCCCC-CGGGGGGGGGCTTCC-----EEECCSSGGGGSTTHHHHHHHHCTTCSEETTEECCHH
T ss_pred CCCCcCC-cchhhHhhhcCCCCC-----EEEecCCCCCCcHhHHHHHHHHCCccceeCCCcCCHH
Confidence 9999997 7776 666655555 999999999988874 4 7899999999988864
No 313
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.52 E-value=4.8e-14 Score=148.79 Aligned_cols=131 Identities=22% Similarity=0.351 Sum_probs=105.7
Q ss_pred CCCceEEEeeCCcCCC--CCC-CcCCCCcccEEeccCCcCcccCCCcccccCccEEEccCccCCCCCCcccCCCcccceE
Q 005224 1 MSKLLKLSLRNCSLQG--PMP-DLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRL 77 (707)
Q Consensus 1 L~~L~~L~L~~N~l~~--~~~-~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 77 (707)
+++|+.|+|++|.++. ..+ .|.++++|++|+|++|+++ .+|..+. .+|+.|+|++|++++..|..|.++++|+.|
T Consensus 144 l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~-~l~~~~~-~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 221 (330)
T 1xku_A 144 LNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT-TIPQGLP-PSLTELHLDGNKITKVDAASLKGLNNLAKL 221 (330)
T ss_dssp CTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCC-SCCSSCC-TTCSEEECTTSCCCEECTGGGTTCTTCCEE
T ss_pred CccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccc-cCCcccc-ccCCEEECCCCcCCccCHHHhcCCCCCCEE
Confidence 4567777777777753 444 5777888888888888888 7887665 388999999999998888889999999999
Q ss_pred eccCcccccCCCCCccccccCCCCccceEEccCccCCCCCCCC-CCCCCceeeccCCCcccc
Q 005224 78 FIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSF-NIPPNVTVRLRGNPFCLN 138 (707)
Q Consensus 78 ~ls~N~l~g~~p~~~~~l~~L~~~~L~~l~l~~N~l~~~~~~~-~~~~l~~l~l~~N~~~~~ 138 (707)
+|++|++++..+..+..+++|+ .|+|++|+|+.+|..+ .+++|+.|++++|++...
T Consensus 222 ~Ls~n~l~~~~~~~~~~l~~L~-----~L~L~~N~l~~lp~~l~~l~~L~~L~l~~N~i~~~ 278 (330)
T 1xku_A 222 GLSFNSISAVDNGSLANTPHLR-----ELHLNNNKLVKVPGGLADHKYIQVVYLHNNNISAI 278 (330)
T ss_dssp ECCSSCCCEECTTTGGGSTTCC-----EEECCSSCCSSCCTTTTTCSSCCEEECCSSCCCCC
T ss_pred ECCCCcCceeChhhccCCCCCC-----EEECCCCcCccCChhhccCCCcCEEECCCCcCCcc
Confidence 9999999877677787766655 8999999999888877 788899999999988643
No 314
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.52 E-value=6e-14 Score=139.04 Aligned_cols=125 Identities=24% Similarity=0.370 Sum_probs=106.7
Q ss_pred eEEEeeCCcCCCCCCCcCCCCcccEEeccCCcCcccCCCcccc-c-CccEEEccCccCCCCCCcccCCCcccceEeccCc
Q 005224 5 LKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLS-L-NITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANN 82 (707)
Q Consensus 5 ~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~-~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N 82 (707)
+.+++++|+|+.++..+. ++|+.|+|++|+|+ .+|...+. + +|+.|+|++|+|++..|..|.++++|++|+|++|
T Consensus 14 ~~v~c~~~~l~~iP~~l~--~~l~~L~l~~n~i~-~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N 90 (220)
T 2v9t_B 14 NIVDCRGKGLTEIPTNLP--ETITEIRLEQNTIK-VIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 90 (220)
T ss_dssp TEEECTTSCCSSCCSSCC--TTCCEEECCSSCCC-EECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSS
T ss_pred CEEEcCCCCcCcCCCccC--cCCCEEECCCCcCC-CcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCC
Confidence 578999999998877665 78999999999999 77765443 4 8999999999999888999999999999999999
Q ss_pred ccccCCCCC-ccccccCCCCccceEEccCccCCCCCCC-C-CCCCCceeeccCCCcccc
Q 005224 83 SLSGSIPSS-IWQSRTLNATETFILDFQNNNLTNISGS-F-NIPPNVTVRLRGNPFCLN 138 (707)
Q Consensus 83 ~l~g~~p~~-~~~l~~L~~~~L~~l~l~~N~l~~~~~~-~-~~~~l~~l~l~~N~~~~~ 138 (707)
+|+ .+|.. +..+++|+ .|+|++|+|+++++. + .+++|+.|+|++|.+...
T Consensus 91 ~l~-~l~~~~f~~l~~L~-----~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 143 (220)
T 2v9t_B 91 KIT-ELPKSLFEGLFSLQ-----LLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTI 143 (220)
T ss_dssp CCC-CCCTTTTTTCTTCC-----EEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCC
T ss_pred cCC-ccCHhHccCCCCCC-----EEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEE
Confidence 999 55554 56666555 999999999999654 4 889999999999998643
No 315
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.51 E-value=6.7e-15 Score=169.56 Aligned_cols=124 Identities=15% Similarity=0.165 Sum_probs=98.4
Q ss_pred cCCCCCCCcCCCCcccEEeccCCcCccc-----------------CCCccc--cc-CccEEEccCccCCCCCCcccCCCc
Q 005224 13 SLQGPMPDLSRIPNLGYLDLSSNQLNGS-----------------IPPGRL--SL-NITTIKLSNNKLTGTIPSNFSGLP 72 (707)
Q Consensus 13 ~l~~~~~~~~~l~~L~~L~Ls~N~l~g~-----------------ip~~~~--~~-~L~~L~Ls~N~l~~~~p~~~~~l~ 72 (707)
+|++++++|+++++|++|+|++|+|+|. +|..+. .+ +|++|+|++|++.+.+|..|++++
T Consensus 194 ~l~~ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~ 273 (636)
T 4eco_A 194 NITFVSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALP 273 (636)
T ss_dssp EEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCS
T ss_pred CCccCCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCC
Confidence 3445333688899999999999999975 888887 66 899999999999989999999999
Q ss_pred ccceEeccCcc-ccc-CCCCCccccccC-CCCccceEEccCccCCCCCC--CC-CCCCCceeeccCCCcc
Q 005224 73 RLQRLFIANNS-LSG-SIPSSIWQSRTL-NATETFILDFQNNNLTNISG--SF-NIPPNVTVRLRGNPFC 136 (707)
Q Consensus 73 ~L~~L~ls~N~-l~g-~~p~~~~~l~~L-~~~~L~~l~l~~N~l~~~~~--~~-~~~~l~~l~l~~N~~~ 136 (707)
+|++|+|++|+ ++| .+|..++.+..+ .+++|++|+|++|+|+.+|. .+ .+++|+.|++++|.+.
T Consensus 274 ~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~~ip~~~~l~~l~~L~~L~L~~N~l~ 343 (636)
T 4eco_A 274 EMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLKTFPVETSLQKMKKLGMLECLYNQLE 343 (636)
T ss_dssp SCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCSSCCCHHHHTTCTTCCEEECCSCCCE
T ss_pred CCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCCccCchhhhccCCCCCEEeCcCCcCc
Confidence 99999999998 888 888888775100 01234489999999998887 55 7888899999988876
No 316
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.51 E-value=1.7e-14 Score=150.92 Aligned_cols=131 Identities=18% Similarity=0.147 Sum_probs=79.6
Q ss_pred CCceEEEeeCCcCCCCCC-CcCCCCcccEEeccCCcCccc--CCCcc--ccc-CccEEEccCccCCCCCCc----ccCCC
Q 005224 2 SKLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQLNGS--IPPGR--LSL-NITTIKLSNNKLTGTIPS----NFSGL 71 (707)
Q Consensus 2 ~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~g~--ip~~~--~~~-~L~~L~Ls~N~l~~~~p~----~~~~l 71 (707)
++|++|+|++|+|++.++ .|+.+++|++|+|++|++.+. ++... ..+ +|++|+|++|+|+ .+|. .+.++
T Consensus 145 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~~l 223 (310)
T 4glp_A 145 PGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGME-TPTGVCAALAAAG 223 (310)
T ss_dssp SCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCC-CHHHHHHHHHHHT
T ss_pred cCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCC-chHHHHHHHHhcC
Confidence 466777777777766665 566677777777777766532 32222 122 5666777777665 3333 24566
Q ss_pred cccceEeccCcccccCCCCCccccccCCCCccceEEccCccCCCCCCCCCCCCCceeeccCCCcc
Q 005224 72 PRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSFNIPPNVTVRLRGNPFC 136 (707)
Q Consensus 72 ~~L~~L~ls~N~l~g~~p~~~~~l~~L~~~~L~~l~l~~N~l~~~~~~~~~~~l~~l~l~~N~~~ 136 (707)
++|++|+|++|+|++.+|..+..+..+ ++|++|+|++|+|+.+|..+. ++|+.|+|++|++.
T Consensus 224 ~~L~~L~Ls~N~l~~~~p~~~~~~~~~--~~L~~L~Ls~N~l~~lp~~~~-~~L~~L~Ls~N~l~ 285 (310)
T 4glp_A 224 VQPHSLDLSHNSLRATVNPSAPRCMWS--SALNSLNLSFAGLEQVPKGLP-AKLRVLDLSSNRLN 285 (310)
T ss_dssp CCCSSEECTTSCCCCCCCSCCSSCCCC--TTCCCEECCSSCCCSCCSCCC-SCCSCEECCSCCCC
T ss_pred CCCCEEECCCCCCCccchhhHHhccCc--CcCCEEECCCCCCCchhhhhc-CCCCEEECCCCcCC
Confidence 677777777777776656666554322 244577777777776665543 56677777777664
No 317
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.50 E-value=2.4e-14 Score=154.80 Aligned_cols=134 Identities=22% Similarity=0.221 Sum_probs=112.6
Q ss_pred CCceEEEeeCCcCCCCCCCcCCCCcccEEeccCCcCcccCCCccccc-CccEEEccCccCCCCCCcccCCCcccceEecc
Q 005224 2 SKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSL-NITTIKLSNNKLTGTIPSNFSGLPRLQRLFIA 80 (707)
Q Consensus 2 ~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls 80 (707)
++|+.|+|++|++++. +.+..+++|++|+|++|.+++..|..+..+ +|+.|+|++|+|+ .+|..+..+++|++|+|+
T Consensus 226 ~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~ 303 (390)
T 3o6n_A 226 VELTILKLQHNNLTDT-AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLV-ALNLYGQPIPTLKVLDLS 303 (390)
T ss_dssp SSCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCC-EEECSSSCCTTCCEEECC
T ss_pred ccccEEECCCCCCccc-HHHcCCCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCc-ccCcccCCCCCCCEEECC
Confidence 4678888888888865 568889999999999999996556666555 8999999999999 577778889999999999
Q ss_pred CcccccCCCCCccccccCCCCccceEEccCccCCCCCCCCCCCCCceeeccCCCccccCCcccc
Q 005224 81 NNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSFNIPPNVTVRLRGNPFCLNTNAEQF 144 (707)
Q Consensus 81 ~N~l~g~~p~~~~~l~~L~~~~L~~l~l~~N~l~~~~~~~~~~~l~~l~l~~N~~~~~~~~~~~ 144 (707)
+|+++ .+|..+..+++|+ .|+|++|+|+.++ ...+++|+.|++++|+|.|+|....+
T Consensus 304 ~n~l~-~~~~~~~~l~~L~-----~L~L~~N~i~~~~-~~~~~~L~~L~l~~N~~~~~~~~~~~ 360 (390)
T 3o6n_A 304 HNHLL-HVERNQPQFDRLE-----NLYLDHNSIVTLK-LSTHHTLKNLTLSHNDWDCNSLRALF 360 (390)
T ss_dssp SSCCC-CCGGGHHHHTTCS-----EEECCSSCCCCCC-CCTTCCCSEEECCSSCEEHHHHHHHT
T ss_pred CCcce-ecCccccccCcCC-----EEECCCCccceeC-chhhccCCEEEcCCCCccchhHHHHH
Confidence 99999 7888887776665 9999999999986 23788999999999999998854433
No 318
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.50 E-value=2.9e-14 Score=143.16 Aligned_cols=130 Identities=26% Similarity=0.369 Sum_probs=113.4
Q ss_pred CCceEEEeeCCcCCCCCC-CcCCCCcccEEeccCCc-CcccCCCcccc-c-CccEEEccC-ccCCCCCCcccCCCcccce
Q 005224 2 SKLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQ-LNGSIPPGRLS-L-NITTIKLSN-NKLTGTIPSNFSGLPRLQR 76 (707)
Q Consensus 2 ~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~Ls~N~-l~g~ip~~~~~-~-~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~ 76 (707)
++|+.|+|++|+|+++++ .|.++++|++|+|++|+ ++ .+|...+. + +|++|+|++ |+|++..+..|.++++|++
T Consensus 31 ~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~-~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~ 109 (239)
T 2xwt_C 31 PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQ-QLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKF 109 (239)
T ss_dssp TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCC-EECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCE
T ss_pred CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcc-eeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCE
Confidence 479999999999999988 79999999999999997 88 88875543 4 899999999 9999777788999999999
Q ss_pred EeccCcccccCCCCCccccccCCCCccceEEccCc-cCCCCCCC-C-CCCCCc-eeeccCCCcc
Q 005224 77 LFIANNSLSGSIPSSIWQSRTLNATETFILDFQNN-NLTNISGS-F-NIPPNV-TVRLRGNPFC 136 (707)
Q Consensus 77 L~ls~N~l~g~~p~~~~~l~~L~~~~L~~l~l~~N-~l~~~~~~-~-~~~~l~-~l~l~~N~~~ 136 (707)
|+|++|+++ .+|. +..+++|+ .|++|++++| +++.+++. + .+++|+ .|++++|.+.
T Consensus 110 L~l~~n~l~-~lp~-~~~l~~L~--~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~ 169 (239)
T 2xwt_C 110 LGIFNTGLK-MFPD-LTKVYSTD--IFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT 169 (239)
T ss_dssp EEEEEECCC-SCCC-CTTCCBCC--SEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC
T ss_pred EeCCCCCCc-cccc-cccccccc--cccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc
Confidence 999999999 5887 77766664 2569999999 99999875 3 789999 9999999875
No 319
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.50 E-value=2e-14 Score=150.57 Aligned_cols=130 Identities=22% Similarity=0.211 Sum_probs=65.9
Q ss_pred CCceEEEeeCCcCCCCCCCcCCC-----CcccEEeccCCcCcccCCCccccc-CccEEEccCccCCCC--CCccc--CCC
Q 005224 2 SKLLKLSLRNCSLQGPMPDLSRI-----PNLGYLDLSSNQLNGSIPPGRLSL-NITTIKLSNNKLTGT--IPSNF--SGL 71 (707)
Q Consensus 2 ~~L~~L~L~~N~l~~~~~~~~~l-----~~L~~L~Ls~N~l~g~ip~~~~~~-~L~~L~Ls~N~l~~~--~p~~~--~~l 71 (707)
++|++|+|++|+|++.++.++.+ ++|++|+|++|+|++..|..+..+ +|++|+|++|++.+. +|..+ .++
T Consensus 121 ~~L~~L~Ls~N~l~~~~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l 200 (312)
T 1wwl_A 121 PDLNILNLRNVSWATRDAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPLKF 200 (312)
T ss_dssp CCCSEEEEESCBCSSSSSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCTTSC
T ss_pred CCccEEEccCCCCcchhHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHHhccC
Confidence 45666666666666653234444 566666666666663222333333 566666666665543 22233 555
Q ss_pred cccceEeccCccccc--CCCCCc-cccccCCCCccceEEccCccCCCCCC--CC-CCCCCceeeccCCCcc
Q 005224 72 PRLQRLFIANNSLSG--SIPSSI-WQSRTLNATETFILDFQNNNLTNISG--SF-NIPPNVTVRLRGNPFC 136 (707)
Q Consensus 72 ~~L~~L~ls~N~l~g--~~p~~~-~~l~~L~~~~L~~l~l~~N~l~~~~~--~~-~~~~l~~l~l~~N~~~ 136 (707)
++|++|+|++|+|++ .++..+ ..++ +|+.|+|++|+|++.++ .+ .+++|+.|++++|.+.
T Consensus 201 ~~L~~L~L~~N~l~~~~~~~~~~~~~l~-----~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~ 266 (312)
T 1wwl_A 201 PTLQVLALRNAGMETPSGVCSALAAARV-----QLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK 266 (312)
T ss_dssp TTCCEEECTTSCCCCHHHHHHHHHHTTC-----CCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS
T ss_pred CCCCEEECCCCcCcchHHHHHHHHhcCC-----CCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC
Confidence 666666666666651 111111 1222 23356666666655432 11 3455556666666554
No 320
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.50 E-value=7.4e-14 Score=160.84 Aligned_cols=125 Identities=25% Similarity=0.324 Sum_probs=72.6
Q ss_pred CceEEEeeCCcCCCCCCC-cCCCCcccEEeccCCcCcccCCCccccc---------CccEEEccCccCCCCCCcccC--C
Q 005224 3 KLLKLSLRNCSLQGPMPD-LSRIPNLGYLDLSSNQLNGSIPPGRLSL---------NITTIKLSNNKLTGTIPSNFS--G 70 (707)
Q Consensus 3 ~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~g~ip~~~~~~---------~L~~L~Ls~N~l~~~~p~~~~--~ 70 (707)
+|+.|+|++|+|+.+++. +..+++|++|+|++|+|+ .+|...+.. +|+.|+|++|+|+ .+|..+. .
T Consensus 434 ~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~ 511 (636)
T 4eco_A 434 NVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLT-EIPKNSLKDENENFKNTYLLTSIDLRFNKLT-KLSDDFRATT 511 (636)
T ss_dssp CEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCS-BCCSSSSEETTEECTTGGGCCEEECCSSCCC-BCCGGGSTTT
T ss_pred CCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCC-CcCHHHhccccccccccCCccEEECcCCcCC-ccChhhhhcc
Confidence 566666666666655443 444666666666666666 666554431 5666666666666 5666555 6
Q ss_pred CcccceEeccCcccccCCCCCccccccCCCCccceEEcc------CccCCC-CCCCC-CCCCCceeeccCCCc
Q 005224 71 LPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQ------NNNLTN-ISGSF-NIPPNVTVRLRGNPF 135 (707)
Q Consensus 71 l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~~~L~~l~l~------~N~l~~-~~~~~-~~~~l~~l~l~~N~~ 135 (707)
+++|+.|+|++|+|++ +|..+..+++|+ .|+|+ +|++.+ +|..+ .+++|+.|++++|.+
T Consensus 512 l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~-----~L~Ls~N~~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l 578 (636)
T 4eco_A 512 LPYLVGIDLSYNSFSK-FPTQPLNSSTLK-----GFGIRNQRDAQGNRTLREWPEGITLCPSLTQLQIGSNDI 578 (636)
T ss_dssp CTTCCEEECCSSCCSS-CCCGGGGCSSCC-----EEECCSCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC
T ss_pred CCCcCEEECCCCCCCC-cChhhhcCCCCC-----EEECCCCcccccCcccccChHHHhcCCCCCEEECCCCcC
Confidence 6666666666666664 666665544444 56663 344443 23333 555666666666665
No 321
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.49 E-value=2e-14 Score=150.42 Aligned_cols=127 Identities=21% Similarity=0.293 Sum_probs=108.2
Q ss_pred CCCceEEEeeCCcCCC---CCC--CcCCCCcccEEeccCCcCcccCCCc---c-ccc-CccEEEccCccCCCCCCcccCC
Q 005224 1 MSKLLKLSLRNCSLQG---PMP--DLSRIPNLGYLDLSSNQLNGSIPPG---R-LSL-NITTIKLSNNKLTGTIPSNFSG 70 (707)
Q Consensus 1 L~~L~~L~L~~N~l~~---~~~--~~~~l~~L~~L~Ls~N~l~g~ip~~---~-~~~-~L~~L~Ls~N~l~~~~p~~~~~ 70 (707)
+++|++|+|++|++.+ .++ .+..+++|++|+|++|+|+ .+|.. + ..+ +|++|+|++|+|++..|..+..
T Consensus 168 l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 246 (310)
T 4glp_A 168 FPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGME-TPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPR 246 (310)
T ss_dssp CTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCC-CHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSS
T ss_pred CCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCC-chHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHh
Confidence 5789999999999986 333 3578999999999999998 66653 2 233 8999999999999888988888
Q ss_pred C---cccceEeccCcccccCCCCCccccccCCCCccceEEccCccCCCCCCCCCCCCCceeeccCCCcc
Q 005224 71 L---PRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSFNIPPNVTVRLRGNPFC 136 (707)
Q Consensus 71 l---~~L~~L~ls~N~l~g~~p~~~~~l~~L~~~~L~~l~l~~N~l~~~~~~~~~~~l~~l~l~~N~~~ 136 (707)
+ ++|++|+|++|+|+ .+|..+. ++|+.|+|++|+|+++|....+++|+.|++++|+|.
T Consensus 247 ~~~~~~L~~L~Ls~N~l~-~lp~~~~-------~~L~~L~Ls~N~l~~~~~~~~l~~L~~L~L~~N~l~ 307 (310)
T 4glp_A 247 CMWSSALNSLNLSFAGLE-QVPKGLP-------AKLRVLDLSSNRLNRAPQPDELPEVDNLTLDGNPFL 307 (310)
T ss_dssp CCCCTTCCCEECCSSCCC-SCCSCCC-------SCCSCEECCSCCCCSCCCTTSCCCCSCEECSSTTTS
T ss_pred ccCcCcCCEEECCCCCCC-chhhhhc-------CCCCEEECCCCcCCCCchhhhCCCccEEECcCCCCC
Confidence 7 69999999999999 8898773 355699999999999876558999999999999985
No 322
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.49 E-value=4e-14 Score=156.20 Aligned_cols=132 Identities=22% Similarity=0.290 Sum_probs=115.1
Q ss_pred CCceEEEeeCCcCCCCCC-CcCCCCcccEEeccCCcCcccCCCcccc-c-CccEEEccCccCCCCCCcccCCCcccceEe
Q 005224 2 SKLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQLNGSIPPGRLS-L-NITTIKLSNNKLTGTIPSNFSGLPRLQRLF 78 (707)
Q Consensus 2 ~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~g~ip~~~~~-~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 78 (707)
++|++|+|++|+|++++| .|.++++|++|+|++|.+.+.++...+. + +|++|+|++|++++..|..|+++++|++|+
T Consensus 30 ~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 109 (455)
T 3v47_A 30 AHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLT 109 (455)
T ss_dssp TTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEE
T ss_pred CccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChhhccCcccCCEEe
Confidence 579999999999999877 7999999999999999998888775544 4 899999999999988899999999999999
Q ss_pred ccCcccccCCCCC--ccccccCCCCccceEEccCccCCCCCC-C-C-CCCCCceeeccCCCcccc
Q 005224 79 IANNSLSGSIPSS--IWQSRTLNATETFILDFQNNNLTNISG-S-F-NIPPNVTVRLRGNPFCLN 138 (707)
Q Consensus 79 ls~N~l~g~~p~~--~~~l~~L~~~~L~~l~l~~N~l~~~~~-~-~-~~~~l~~l~l~~N~~~~~ 138 (707)
|++|++++.+|.. +..+++|+ +|+|++|+++++.+ . + .+++|+.|++++|.+...
T Consensus 110 L~~n~l~~~~~~~~~~~~l~~L~-----~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~ 169 (455)
T 3v47_A 110 LTQCNLDGAVLSGNFFKPLTSLE-----MLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSI 169 (455)
T ss_dssp CTTSCCBTHHHHSSTTTTCTTCC-----EEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCC
T ss_pred CCCCCCCccccCcccccCcccCC-----EEECCCCccCccCcccccCCCCcccEEeCCCCccccc
Confidence 9999999765544 76666555 99999999999854 3 4 899999999999998643
No 323
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.49 E-value=5.5e-14 Score=158.96 Aligned_cols=119 Identities=28% Similarity=0.403 Sum_probs=100.8
Q ss_pred CceEEEeeCCcCCCCCCCcCCCCcccEEeccCCcCcccCCCccccc-CccEEEccCccCCCCCCcccCCCcccceEeccC
Q 005224 3 KLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSL-NITTIKLSNNKLTGTIPSNFSGLPRLQRLFIAN 81 (707)
Q Consensus 3 ~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~ 81 (707)
.|+.|+|++|+|++++ .|+.+++|+.|+|++|+|+ .+|..+..+ +|+.|+|++|+|++ +| .|+++++|+.|+|++
T Consensus 442 ~L~~L~Ls~n~l~~lp-~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~ 517 (567)
T 1dce_A 442 DVRVLHLAHKDLTVLC-HLEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCN 517 (567)
T ss_dssp TCSEEECTTSCCSSCC-CGGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCS
T ss_pred CceEEEecCCCCCCCc-CccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCC
Confidence 5788999999999865 4899999999999999999 999877776 89999999999995 77 899999999999999
Q ss_pred cccccCC-CCCccccccCCCCccceEEccCccCCCCCCCC-----CCCCCceeec
Q 005224 82 NSLSGSI-PSSIWQSRTLNATETFILDFQNNNLTNISGSF-----NIPPNVTVRL 130 (707)
Q Consensus 82 N~l~g~~-p~~~~~l~~L~~~~L~~l~l~~N~l~~~~~~~-----~~~~l~~l~l 130 (707)
|+|++.. |..+..+++|+ .|+|++|+|+++|+.. .+|+|+.|++
T Consensus 518 N~l~~~~~p~~l~~l~~L~-----~L~L~~N~l~~~~~~~~~l~~~lp~L~~L~l 567 (567)
T 1dce_A 518 NRLQQSAAIQPLVSCPRLV-----LLNLQGNSLCQEEGIQERLAEMLPSVSSILT 567 (567)
T ss_dssp SCCCSSSTTGGGGGCTTCC-----EEECTTSGGGGSSSCTTHHHHHCTTCSEEEC
T ss_pred CCCCCCCCcHHHhcCCCCC-----EEEecCCcCCCCccHHHHHHHHCcccCccCC
Confidence 9999766 88888877666 8999999999987754 3778877753
No 324
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.49 E-value=1.9e-14 Score=169.48 Aligned_cols=129 Identities=18% Similarity=0.338 Sum_probs=112.6
Q ss_pred CCCceEEEeeCCcCCC------------------CCCCcC--CCCcccEEeccCCcCcccCCCccccc-CccEEEccCcc
Q 005224 1 MSKLLKLSLRNCSLQG------------------PMPDLS--RIPNLGYLDLSSNQLNGSIPPGRLSL-NITTIKLSNNK 59 (707)
Q Consensus 1 L~~L~~L~L~~N~l~~------------------~~~~~~--~l~~L~~L~Ls~N~l~g~ip~~~~~~-~L~~L~Ls~N~ 59 (707)
|++|+.|+|++|+|++ +++.++ ++++|++|+|++|++.|.+|..+..+ +|+.|+|++|+
T Consensus 447 L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~ 526 (876)
T 4ecn_A 447 LTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNR 526 (876)
T ss_dssp CTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCT
T ss_pred CCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCC
Confidence 5789999999999999 555777 99999999999999999999888777 89999999998
Q ss_pred -CCC-CCCcccCCCc-------ccceEeccCcccccCCCC--CccccccCCCCccceEEccCccCCCCCCCC-CCCCCce
Q 005224 60 -LTG-TIPSNFSGLP-------RLQRLFIANNSLSGSIPS--SIWQSRTLNATETFILDFQNNNLTNISGSF-NIPPNVT 127 (707)
Q Consensus 60 -l~~-~~p~~~~~l~-------~L~~L~ls~N~l~g~~p~--~~~~l~~L~~~~L~~l~l~~N~l~~~~~~~-~~~~l~~ 127 (707)
|+| .+|..|++++ +|+.|+|++|+|+ .+|. .+.++++|+ .|+|++|+|+.+| .+ .+++|+.
T Consensus 527 ~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~-----~L~Ls~N~l~~lp-~~~~L~~L~~ 599 (876)
T 4ecn_A 527 GISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLG-----LLDCVHNKVRHLE-AFGTNVKLTD 599 (876)
T ss_dssp TSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCC-----EEECTTSCCCBCC-CCCTTSEESE
T ss_pred CcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCC-----EEECCCCCcccch-hhcCCCcceE
Confidence 998 8898777766 9999999999999 8998 888777665 8999999999888 44 7888889
Q ss_pred eeccCCCcc
Q 005224 128 VRLRGNPFC 136 (707)
Q Consensus 128 l~l~~N~~~ 136 (707)
|+|++|.+.
T Consensus 600 L~Ls~N~l~ 608 (876)
T 4ecn_A 600 LKLDYNQIE 608 (876)
T ss_dssp EECCSSCCS
T ss_pred EECcCCccc
Confidence 999999876
No 325
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.48 E-value=2.8e-14 Score=169.91 Aligned_cols=140 Identities=21% Similarity=0.168 Sum_probs=110.8
Q ss_pred CCCceEEEeeCCcCCCCCC--CcCCCCcccEEeccCCcCcccC-----CCccccc-CccEEEccCccCCCCCCcccCCCc
Q 005224 1 MSKLLKLSLRNCSLQGPMP--DLSRIPNLGYLDLSSNQLNGSI-----PPGRLSL-NITTIKLSNNKLTGTIPSNFSGLP 72 (707)
Q Consensus 1 L~~L~~L~L~~N~l~~~~~--~~~~l~~L~~L~Ls~N~l~g~i-----p~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~ 72 (707)
+++|+.|+|++|++++.++ .+..+++|++|+|++|.+++.. |..+..+ +|+.|+|++|+|++..|..|.+++
T Consensus 425 l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 504 (844)
T 3j0a_A 425 VPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLT 504 (844)
T ss_dssp CTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSSSCC
T ss_pred CCccceeeCCCCcccccccccccccCCccccccCCCCccccccccccchhhhcCcccccEEECCCCcccccChhHccchh
Confidence 4678888888888887765 3667888888888888887222 2223333 799999999999988888899999
Q ss_pred ccceEeccCcccccCCCCCccccccCCCCccceEEccCccCCCCCCCCCCCCCceeeccCCCccccCCcccccCCC
Q 005224 73 RLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSFNIPPNVTVRLRGNPFCLNTNAEQFCGSH 148 (707)
Q Consensus 73 ~L~~L~ls~N~l~g~~p~~~~~l~~L~~~~L~~l~l~~N~l~~~~~~~~~~~l~~l~l~~N~~~~~~~~~~~~~~~ 148 (707)
+|+.|+|++|+|++..|..+. ++|+.|+|++|+|+++++.. +.++..|++++|||.|+|.+..|..|.
T Consensus 505 ~L~~L~Ls~N~l~~l~~~~~~-------~~L~~L~Ls~N~l~~~~~~~-~~~L~~l~l~~Np~~C~c~~~~f~~~~ 572 (844)
T 3j0a_A 505 ALRGLSLNSNRLTVLSHNDLP-------ANLEILDISRNQLLAPNPDV-FVSLSVLDITHNKFICECELSTFINWL 572 (844)
T ss_dssp SCSEEEEESCCCSSCCCCCCC-------SCCCEEEEEEECCCCCCSCC-CSSCCEEEEEEECCCCSSSCCSHHHHH
T ss_pred hhheeECCCCCCCccChhhhh-------ccccEEECCCCcCCCCChhH-hCCcCEEEecCCCcccccccHHHHHHH
Confidence 999999999999955554442 35569999999999987653 668999999999999999988877664
No 326
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.48 E-value=8.6e-14 Score=146.99 Aligned_cols=130 Identities=20% Similarity=0.280 Sum_probs=85.5
Q ss_pred CCceEEEeeCCcCCCCCC-CcCCCCcccEEeccCCcCcc------------------------cCCCcccccCccEEEcc
Q 005224 2 SKLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQLNG------------------------SIPPGRLSLNITTIKLS 56 (707)
Q Consensus 2 ~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~g------------------------~ip~~~~~~~L~~L~Ls 56 (707)
++|++|+|++|+++++++ .|..+++|++|+|++|.++. .+|..++ .+|+.|+|+
T Consensus 123 ~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~L~~L~l~~n~l~~l~~~~~-~~L~~L~l~ 201 (332)
T 2ft3_A 123 SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGLKLNYLRISEAKLTGIPKDLP-ETLNELHLD 201 (332)
T ss_dssp TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSCCCSCCBCCSSBCSSCCSSSC-SSCSCCBCC
T ss_pred ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCCccCEEECcCCCCCccCcccc-CCCCEEECC
Confidence 357777777777776666 46777777777777777641 2332222 156666677
Q ss_pred CccCCCCCCcccCCCcccceEeccCcccccCCCCCccccccCCCCccceEEccCccCCCCCCCC-CCCCCceeeccCCCc
Q 005224 57 NNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSF-NIPPNVTVRLRGNPF 135 (707)
Q Consensus 57 ~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~~~L~~l~l~~N~l~~~~~~~-~~~~l~~l~l~~N~~ 135 (707)
+|++++..|..|.++++|+.|+|++|++++..|..+..+++|+ .|+|++|+|+.+|..+ .+++|+.|++++|++
T Consensus 202 ~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~-----~L~L~~N~l~~lp~~l~~l~~L~~L~l~~N~l 276 (332)
T 2ft3_A 202 HNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLR-----ELHLDNNKLSRVPAGLPDLKLLQVVYLHTNNI 276 (332)
T ss_dssp SSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCC-----EEECCSSCCCBCCTTGGGCTTCCEEECCSSCC
T ss_pred CCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCC-----EEECCCCcCeecChhhhcCccCCEEECCCCCC
Confidence 7777765566677777777777777777755555666555444 7777777777776665 667777777777776
Q ss_pred cc
Q 005224 136 CL 137 (707)
Q Consensus 136 ~~ 137 (707)
..
T Consensus 277 ~~ 278 (332)
T 2ft3_A 277 TK 278 (332)
T ss_dssp CB
T ss_pred Cc
Confidence 53
No 327
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.48 E-value=5.4e-14 Score=156.30 Aligned_cols=130 Identities=22% Similarity=0.281 Sum_probs=91.3
Q ss_pred CCceEEEeeCCcCCCCCC-CcCCCCcccEEeccCCcCcccCCCccccc-CccEEEccCccCCCCCCcccCCCcccceEec
Q 005224 2 SKLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQLNGSIPPGRLSL-NITTIKLSNNKLTGTIPSNFSGLPRLQRLFI 79 (707)
Q Consensus 2 ~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 79 (707)
++|+.|+|++|+|+++++ .|.++++|++|+|++|.|++..|..+..+ +|+.|+|++|+|++..+..|.++++|++|+|
T Consensus 32 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 111 (477)
T 2id5_A 32 TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDI 111 (477)
T ss_dssp TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEEC
T ss_pred CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEEC
Confidence 357778888888877766 57778888888888888874445555444 7788888888877555556777778888888
Q ss_pred cCcccccCCCCCccccccCCCCccceEEccCccCCCCCCC-C-CCCCCceeeccCCCcc
Q 005224 80 ANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGS-F-NIPPNVTVRLRGNPFC 136 (707)
Q Consensus 80 s~N~l~g~~p~~~~~l~~L~~~~L~~l~l~~N~l~~~~~~-~-~~~~l~~l~l~~N~~~ 136 (707)
++|++++..|..+..+++|+ .|+|++|+++.+++. + .+++|+.|++++|.+.
T Consensus 112 s~n~i~~~~~~~~~~l~~L~-----~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 165 (477)
T 2id5_A 112 SENKIVILLDYMFQDLYNLK-----SLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLT 165 (477)
T ss_dssp TTSCCCEECTTTTTTCTTCC-----EEEECCTTCCEECTTSSTTCTTCCEEEEESCCCS
T ss_pred CCCccccCChhHccccccCC-----EEECCCCccceeChhhccCCCCCCEEECCCCcCc
Confidence 88877766676676655554 777777777766443 3 6677777777777664
No 328
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.47 E-value=1.5e-13 Score=144.87 Aligned_cols=127 Identities=24% Similarity=0.359 Sum_probs=64.5
Q ss_pred CCceEEEeeCCcCCCCCC-CcCCCCcccEEeccCCcCcccCCCcccccCccEEEccCccCCCCCCcccCCCcccceEecc
Q 005224 2 SKLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIA 80 (707)
Q Consensus 2 ~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls 80 (707)
++|++|+|++|+++++.| .|..+++|++|+|++|+|+ .+|..++. +|+.|+|++|++++..+..|.++++|+.|+|+
T Consensus 76 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~-~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 153 (330)
T 1xku_A 76 KNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK-ELPEKMPK-TLQELRVHENEITKVRKSVFNGLNQMIVVELG 153 (330)
T ss_dssp TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCS-BCCSSCCT-TCCEEECCSSCCCBBCHHHHTTCTTCCEEECC
T ss_pred CCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCcCC-ccChhhcc-cccEEECCCCcccccCHhHhcCCccccEEECC
Confidence 344555555555554433 3445555555555555555 44444432 45555555555554444445555555555555
Q ss_pred Ccccc--cCCCCCccccccCCCCccceEEccCccCCCCCCCCCCCCCceeeccCCCcc
Q 005224 81 NNSLS--GSIPSSIWQSRTLNATETFILDFQNNNLTNISGSFNIPPNVTVRLRGNPFC 136 (707)
Q Consensus 81 ~N~l~--g~~p~~~~~l~~L~~~~L~~l~l~~N~l~~~~~~~~~~~l~~l~l~~N~~~ 136 (707)
+|.++ +..+..+..+++|+ .|++++|+++.+|..+. ++|+.|++++|.+.
T Consensus 154 ~n~l~~~~~~~~~~~~l~~L~-----~L~l~~n~l~~l~~~~~-~~L~~L~l~~n~l~ 205 (330)
T 1xku_A 154 TNPLKSSGIENGAFQGMKKLS-----YIRIADTNITTIPQGLP-PSLTELHLDGNKIT 205 (330)
T ss_dssp SSCCCGGGBCTTGGGGCTTCC-----EEECCSSCCCSCCSSCC-TTCSEEECTTSCCC
T ss_pred CCcCCccCcChhhccCCCCcC-----EEECCCCccccCCcccc-ccCCEEECCCCcCC
Confidence 55553 24444454444433 56666666665554432 55555666665543
No 329
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.47 E-value=1.1e-13 Score=134.03 Aligned_cols=108 Identities=24% Similarity=0.310 Sum_probs=93.4
Q ss_pred CCceEEEeeCCcCCCCCCCcCCCCcccEEeccCCcCcccCCCccc-cc-CccEEEccCccCCCCCCcccCCCcccceEec
Q 005224 2 SKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRL-SL-NITTIKLSNNKLTGTIPSNFSGLPRLQRLFI 79 (707)
Q Consensus 2 ~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~ip~~~~-~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 79 (707)
++|+.|+|++|+|+.++..|.++++|++|+|++|+|+ .++...+ .+ +|+.|+|++|+|++..|..|.++++|+.|+|
T Consensus 31 ~~l~~L~L~~n~i~~ip~~~~~l~~L~~L~Ls~N~i~-~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L 109 (193)
T 2wfh_A 31 RDVTELYLDGNQFTLVPKELSNYKHLTLIDLSNNRIS-TLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSL 109 (193)
T ss_dssp TTCCEEECCSSCCCSCCGGGGGCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEECCCCcCchhHHHhhcccCCCEEECCCCcCC-EeCHhHccCCCCCCEEECCCCccCEeCHHHhCCCCCCCEEEC
Confidence 4799999999999977668999999999999999999 6776544 44 8999999999999888889999999999999
Q ss_pred cCcccccCCCCCccccccCCCCccceEEccCccCCC
Q 005224 80 ANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTN 115 (707)
Q Consensus 80 s~N~l~g~~p~~~~~l~~L~~~~L~~l~l~~N~l~~ 115 (707)
++|+|++..+..+..+++|+ .|+|++|.+..
T Consensus 110 ~~N~l~~~~~~~~~~l~~L~-----~L~L~~N~~~C 140 (193)
T 2wfh_A 110 HGNDISVVPEGAFNDLSALS-----HLAIGANPLYC 140 (193)
T ss_dssp CSSCCCBCCTTTTTTCTTCC-----EEECCSSCEEC
T ss_pred CCCCCCeeChhhhhcCcccc-----EEEeCCCCeec
Confidence 99999954444576666555 99999999875
No 330
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.47 E-value=1.5e-13 Score=151.64 Aligned_cols=134 Identities=20% Similarity=0.226 Sum_probs=91.3
Q ss_pred CCceEEEeeCCcCCCCCC-CcCCCCcccEEeccCCcCcccCCC-ccccc-CccEEEccCccCCCCCCcccCCCcccceEe
Q 005224 2 SKLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQLNGSIPP-GRLSL-NITTIKLSNNKLTGTIPSNFSGLPRLQRLF 78 (707)
Q Consensus 2 ~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~g~ip~-~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 78 (707)
++|+.|+|++|+|+++.+ .|.++++|++|+|++|+|+ .++. .+..+ +|+.|+|++|+|++..+..|.++++|++|+
T Consensus 75 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 153 (452)
T 3zyi_A 75 SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIR-QIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELW 153 (452)
T ss_dssp TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCC-EECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEE
T ss_pred CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccC-CcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEE
Confidence 467888888888888776 6888888888888888888 4443 34434 788888888888866666688888888888
Q ss_pred ccCcccccCCCCCccccccCC--------------------CCccceEEccCccCCCCCCCCCCCCCceeeccCCCcc
Q 005224 79 IANNSLSGSIPSSIWQSRTLN--------------------ATETFILDFQNNNLTNISGSFNIPPNVTVRLRGNPFC 136 (707)
Q Consensus 79 ls~N~l~g~~p~~~~~l~~L~--------------------~~~L~~l~l~~N~l~~~~~~~~~~~l~~l~l~~N~~~ 136 (707)
|++|+|++..+..+.++++|+ +++|++|+|++|+|+.+|....+++|+.|+|++|.+.
T Consensus 154 L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~Ls~N~l~ 231 (452)
T 3zyi_A 154 LRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDMPNLTPLVGLEELEMSGNHFP 231 (452)
T ss_dssp CCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSCCCCTTCTTCCEEECTTSCCS
T ss_pred CCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCcccccccccccccccEEECcCCcCc
Confidence 888888744343444443332 2344566666666666654445666666666666654
No 331
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.47 E-value=1.2e-13 Score=158.11 Aligned_cols=132 Identities=24% Similarity=0.274 Sum_probs=114.2
Q ss_pred CCceEEEeeCCcCCCCCC-CcCCCCcccEEeccCCcCcccCCCccccc-CccEEEccCccCCCCCCcccCCCcccceEec
Q 005224 2 SKLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQLNGSIPPGRLSL-NITTIKLSNNKLTGTIPSNFSGLPRLQRLFI 79 (707)
Q Consensus 2 ~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 79 (707)
++|+.|+|++|+++++++ .|.++++|++|+|++|++++..|..+..+ +|++|+|++|+|++..|..|+++++|++|+|
T Consensus 32 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L 111 (606)
T 3vq2_A 32 SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVA 111 (606)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEEC
T ss_pred CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEc
Confidence 478999999999999888 79999999999999999994344455555 8999999999999888999999999999999
Q ss_pred cCcccccCCCCCccccccCCCCccceEEccCccCCC--CCCCC-CCCCCceeeccCCCcccc
Q 005224 80 ANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTN--ISGSF-NIPPNVTVRLRGNPFCLN 138 (707)
Q Consensus 80 s~N~l~g~~p~~~~~l~~L~~~~L~~l~l~~N~l~~--~~~~~-~~~~l~~l~l~~N~~~~~ 138 (707)
++|++++..|..+.++++|+ +|+|++|++++ +|..+ .+++|+.|++++|.+...
T Consensus 112 ~~n~l~~~~~~~~~~l~~L~-----~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~ 168 (606)
T 3vq2_A 112 VETKLASLESFPIGQLITLK-----KLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTI 168 (606)
T ss_dssp TTSCCCCSSSSCCTTCTTCC-----EEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEE
T ss_pred cCCccccccccccCCCCCCC-----EEeCCCCcccceechHhHhhcCCCCEEEccCCcceec
Confidence 99999966667888776665 99999999996 56666 899999999999988653
No 332
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.47 E-value=1.6e-13 Score=142.20 Aligned_cols=123 Identities=24% Similarity=0.436 Sum_probs=57.4
Q ss_pred CCceEEEeeCCcCCCCCCCcCCCCcccEEeccCCcCcccCCCccccc-CccEEEccCccCCCCCCcccCCCcccceEecc
Q 005224 2 SKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSL-NITTIKLSNNKLTGTIPSNFSGLPRLQRLFIA 80 (707)
Q Consensus 2 ~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls 80 (707)
++|+.|+|++|++++.++ +..+++|++|+|++|+|+ .+|. +..+ +|+.|+|++|+|++ + ..+..+++|+.|+|+
T Consensus 68 ~~L~~L~L~~n~l~~~~~-l~~l~~L~~L~l~~n~l~-~~~~-l~~l~~L~~L~L~~n~i~~-~-~~l~~l~~L~~L~l~ 142 (291)
T 1h6t_A 68 PNVTKLFLNGNKLTDIKP-LANLKNLGWLFLDENKVK-DLSS-LKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYLG 142 (291)
T ss_dssp TTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCC-CGGG-GTTCTTCCEEECTTSCCCC-C-GGGGGCTTCCEEECC
T ss_pred CCCCEEEccCCccCCCcc-cccCCCCCEEECCCCcCC-CChh-hccCCCCCEEECCCCcCCC-C-hhhcCCCCCCEEEcc
Confidence 344555555555554444 444555555555555554 3332 2222 45555555555552 2 234455555555555
Q ss_pred CcccccCCCCCccccccCCCCccceEEccCccCCCCCCCCCCCCCceeeccCCCcc
Q 005224 81 NNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSFNIPPNVTVRLRGNPFC 136 (707)
Q Consensus 81 ~N~l~g~~p~~~~~l~~L~~~~L~~l~l~~N~l~~~~~~~~~~~l~~l~l~~N~~~ 136 (707)
+|++++ + ..+..+++|+ .|+|++|+|+++++...+++|+.|++++|.+.
T Consensus 143 ~n~l~~-~-~~l~~l~~L~-----~L~L~~N~l~~~~~l~~l~~L~~L~L~~N~i~ 191 (291)
T 1h6t_A 143 NNKITD-I-TVLSRLTKLD-----TLSLEDNQISDIVPLAGLTKLQNLYLSKNHIS 191 (291)
T ss_dssp SSCCCC-C-GGGGGCTTCS-----EEECCSSCCCCCGGGTTCTTCCEEECCSSCCC
T ss_pred CCcCCc-c-hhhccCCCCC-----EEEccCCccccchhhcCCCccCEEECCCCcCC
Confidence 555542 2 2333333332 55555555555544224555555555555543
No 333
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.47 E-value=2.1e-13 Score=130.04 Aligned_cols=110 Identities=25% Similarity=0.311 Sum_probs=93.8
Q ss_pred CCceEEEeeCCcCCCCCC-CcCCCCcccEEeccCCcCcccCCCccc-cc-CccEEEccCccCCCCCCcccCCCcccceEe
Q 005224 2 SKLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQLNGSIPPGRL-SL-NITTIKLSNNKLTGTIPSNFSGLPRLQRLF 78 (707)
Q Consensus 2 ~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~g~ip~~~~-~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 78 (707)
++|+.|+|++|+|+++++ .|..+++|++|+|++|+|+ .+|...+ .+ +|+.|+|++|+|++..+..|.++++|++|+
T Consensus 28 ~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ 106 (177)
T 2o6r_A 28 SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQ-SLPDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELA 106 (177)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcce-EeChhHccCCCccCEEECCCCCccccCHHHhhCCcccCEEE
Confidence 579999999999999888 5899999999999999999 7777654 34 899999999999977777789999999999
Q ss_pred ccCcccccCCCCCccccccCCCCccceEEccCccCCCCC
Q 005224 79 IANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNIS 117 (707)
Q Consensus 79 ls~N~l~g~~p~~~~~l~~L~~~~L~~l~l~~N~l~~~~ 117 (707)
|++|+|++..+..+..+++|+ .|+|++|.++...
T Consensus 107 l~~N~l~~~~~~~~~~l~~L~-----~L~l~~N~~~~~~ 140 (177)
T 2o6r_A 107 LDTNQLKSVPDGIFDRLTSLQ-----KIWLHTNPWDCSC 140 (177)
T ss_dssp CCSSCCSCCCTTTTTTCTTCC-----EEECCSSCBCCCH
T ss_pred CcCCcceEeCHHHhcCCcccC-----EEEecCCCeeccC
Confidence 999999944444456665555 9999999998743
No 334
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.47 E-value=1.5e-13 Score=151.19 Aligned_cols=134 Identities=23% Similarity=0.300 Sum_probs=81.9
Q ss_pred CCceEEEeeCCcCCCCCC-CcCCCCcccEEeccCCcCcccCCCccc-cc-CccEEEccCccCCCCCCcccCCCcccceEe
Q 005224 2 SKLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQLNGSIPPGRL-SL-NITTIKLSNNKLTGTIPSNFSGLPRLQRLF 78 (707)
Q Consensus 2 ~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~g~ip~~~~-~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 78 (707)
++|+.|+|++|+|+++.+ .|.++++|++|+|++|+|+ .++...+ .+ +|+.|+|++|+|+...+..|.++++|++|+
T Consensus 64 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~-~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 142 (440)
T 3zyj_A 64 TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIR-TIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELW 142 (440)
T ss_dssp TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCC-EECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEE
T ss_pred CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCC-ccChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceee
Confidence 356777777777777665 5777777777777777777 5554333 23 677777777777755555677777777777
Q ss_pred ccCcccccCCCCCccccccCC--------------------CCccceEEccCccCCCCCCCCCCCCCceeeccCCCcc
Q 005224 79 IANNSLSGSIPSSIWQSRTLN--------------------ATETFILDFQNNNLTNISGSFNIPPNVTVRLRGNPFC 136 (707)
Q Consensus 79 ls~N~l~g~~p~~~~~l~~L~--------------------~~~L~~l~l~~N~l~~~~~~~~~~~l~~l~l~~N~~~ 136 (707)
|++|+|++..+..+..+++|+ +++|+.|+|++|+|+.+|....+++|+.|+|++|.+.
T Consensus 143 L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~Ls~N~l~ 220 (440)
T 3zyj_A 143 LRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREIPNLTPLIKLDELDLSGNHLS 220 (440)
T ss_dssp CCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSSCCCCTTCSSCCEEECTTSCCC
T ss_pred CCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCccccccCCCcccCEEECCCCccC
Confidence 777777644343444443332 2233455555555555554335555555555555543
No 335
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.47 E-value=2.8e-14 Score=149.47 Aligned_cols=133 Identities=18% Similarity=0.204 Sum_probs=108.8
Q ss_pred CCCceEEEeeCCcCCCCCC-Cc--CCCCcccEEeccCCcCcccCCCcccc------cCccEEEccCccCCCCCCcccCCC
Q 005224 1 MSKLLKLSLRNCSLQGPMP-DL--SRIPNLGYLDLSSNQLNGSIPPGRLS------LNITTIKLSNNKLTGTIPSNFSGL 71 (707)
Q Consensus 1 L~~L~~L~L~~N~l~~~~~-~~--~~l~~L~~L~Ls~N~l~g~ip~~~~~------~~L~~L~Ls~N~l~~~~p~~~~~l 71 (707)
+++|++|+|++|+|++..| .+ ..+++|++|+|++|+|++ +|..+.. .+|++|+|++|+|++..|..|+++
T Consensus 94 l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~-~~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l 172 (312)
T 1wwl_A 94 ISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWAT-RDAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVF 172 (312)
T ss_dssp TSCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSS-SSSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCC
T ss_pred cCCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcc-hhHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccC
Confidence 4689999999999998777 54 899999999999999994 4764432 389999999999998888999999
Q ss_pred cccceEeccCcccccCC--CCCc--cccccCCCCccceEEccCccCCCCCC---CC--CCCCCceeeccCCCccccC
Q 005224 72 PRLQRLFIANNSLSGSI--PSSI--WQSRTLNATETFILDFQNNNLTNISG---SF--NIPPNVTVRLRGNPFCLNT 139 (707)
Q Consensus 72 ~~L~~L~ls~N~l~g~~--p~~~--~~l~~L~~~~L~~l~l~~N~l~~~~~---~~--~~~~l~~l~l~~N~~~~~~ 139 (707)
++|++|+|++|++.|.+ |..+ ..++ +|++|+|++|+|++++. .+ .+++|+.|++++|.+....
T Consensus 173 ~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~-----~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 244 (312)
T 1wwl_A 173 PALSTLDLSDNPELGERGLISALCPLKFP-----TLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAA 244 (312)
T ss_dssp SSCCEEECCSCTTCHHHHHHHHSCTTSCT-----TCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSC
T ss_pred CCCCEEECCCCCcCcchHHHHHHHhccCC-----CCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCccc
Confidence 99999999999988653 3333 4544 44599999999996543 22 6789999999999986543
No 336
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.46 E-value=7.4e-14 Score=140.18 Aligned_cols=128 Identities=17% Similarity=0.206 Sum_probs=97.6
Q ss_pred CCCceEEEeeCCc-CCCCCC-CcCCCCcccEEeccC-CcCcccCCCccc-cc-CccEEEccCccCCCCCCcccCCCcccc
Q 005224 1 MSKLLKLSLRNCS-LQGPMP-DLSRIPNLGYLDLSS-NQLNGSIPPGRL-SL-NITTIKLSNNKLTGTIPSNFSGLPRLQ 75 (707)
Q Consensus 1 L~~L~~L~L~~N~-l~~~~~-~~~~l~~L~~L~Ls~-N~l~g~ip~~~~-~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 75 (707)
+++|+.|+|++|+ ++++++ .|.++++|++|+|++ |+|+ .+|...+ .+ +|+.|+|++|+|++ +|. |..+++|+
T Consensus 54 l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~-~i~~~~f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~ 130 (239)
T 2xwt_C 54 LPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLT-YIDPDALKELPLLKFLGIFNTGLKM-FPD-LTKVYSTD 130 (239)
T ss_dssp CTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCC-EECTTSEECCTTCCEEEEEEECCCS-CCC-CTTCCBCC
T ss_pred CCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCee-EcCHHHhCCCCCCCEEeCCCCCCcc-ccc-cccccccc
Confidence 4678899999996 888777 688899999999998 8998 7776544 33 78999999998884 776 88888887
Q ss_pred ---eEeccCc-ccccCCCCCccccccCCCCccc-eEEccCccCCCCCCCC-CCCCCceeeccCCC-cc
Q 005224 76 ---RLFIANN-SLSGSIPSSIWQSRTLNATETF-ILDFQNNNLTNISGSF-NIPPNVTVRLRGNP-FC 136 (707)
Q Consensus 76 ---~L~ls~N-~l~g~~p~~~~~l~~L~~~~L~-~l~l~~N~l~~~~~~~-~~~~l~~l~l~~N~-~~ 136 (707)
+|++++| ++++..+..+..+ ++|+ .|+|++|+++.+|... ..++|+.|++++|+ +.
T Consensus 131 ~L~~L~l~~N~~l~~i~~~~~~~l-----~~L~~~L~l~~n~l~~i~~~~~~~~~L~~L~L~~n~~l~ 193 (239)
T 2xwt_C 131 IFFILEITDNPYMTSIPVNAFQGL-----CNETLTLKLYNNGFTSVQGYAFNGTKLDAVYLNKNKYLT 193 (239)
T ss_dssp SEEEEEEESCTTCCEECTTTTTTT-----BSSEEEEECCSCCCCEECTTTTTTCEEEEEECTTCTTCC
T ss_pred cccEEECCCCcchhhcCcccccch-----hcceeEEEcCCCCCcccCHhhcCCCCCCEEEcCCCCCcc
Confidence 8888888 8884444456543 3456 7888888888777654 44678888888885 64
No 337
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.46 E-value=8.3e-14 Score=162.33 Aligned_cols=126 Identities=25% Similarity=0.299 Sum_probs=99.9
Q ss_pred ceEEEeeCCcCCCC---------CC-CcCCCCcccEEeccCCcCcccCCCccccc-CccEEEccCccCCCCCCcccCCCc
Q 005224 4 LLKLSLRNCSLQGP---------MP-DLSRIPNLGYLDLSSNQLNGSIPPGRLSL-NITTIKLSNNKLTGTIPSNFSGLP 72 (707)
Q Consensus 4 L~~L~L~~N~l~~~---------~~-~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~ 72 (707)
|+.++|++|.|.+. ++ .|..+++|+.|+|++|.|. .||..++.+ +|+.|+|++|+|+ .+|..|++|+
T Consensus 193 l~~l~Ls~~~i~~~~~~~n~~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~ 270 (727)
T 4b8c_D 193 LQHKKLSQYSIDEDDDIENRMVMPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLS 270 (727)
T ss_dssp -----------------------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGT
T ss_pred hhcCccCcccccCccccccceecChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCC
Confidence 45556666655542 24 5888999999999999999 999988877 8999999999999 8999999999
Q ss_pred ccceEeccCcccccCCCCCccccccCCCCccceEEccCccCCCCCCCC-CCCCCceeeccCCCccc
Q 005224 73 RLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSF-NIPPNVTVRLRGNPFCL 137 (707)
Q Consensus 73 ~L~~L~ls~N~l~g~~p~~~~~l~~L~~~~L~~l~l~~N~l~~~~~~~-~~~~l~~l~l~~N~~~~ 137 (707)
+|++|+|++|+|+ .+|..+..+++|+ +|+|++|.|+.+|..+ .+++|+.|+|++|++..
T Consensus 271 ~L~~L~Ls~N~l~-~lp~~~~~l~~L~-----~L~L~~N~l~~lp~~~~~l~~L~~L~L~~N~l~~ 330 (727)
T 4b8c_D 271 NLRVLDLSHNRLT-SLPAELGSCFQLK-----YFYFFDNMVTTLPWEFGNLCNLQFLGVEGNPLEK 330 (727)
T ss_dssp TCCEEECTTSCCS-SCCSSGGGGTTCS-----EEECCSSCCCCCCSSTTSCTTCCCEECTTSCCCS
T ss_pred CCCEEeCcCCcCC-ccChhhcCCCCCC-----EEECCCCCCCccChhhhcCCCccEEeCCCCccCC
Confidence 9999999999999 8999998877776 9999999999999887 89999999999999864
No 338
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.46 E-value=1.5e-13 Score=157.35 Aligned_cols=131 Identities=21% Similarity=0.220 Sum_probs=114.8
Q ss_pred CCceEEEeeCCcCCCCCC-CcCCCCcccEEeccCCcCcccCCCccccc-CccEEEccCccCCCCCCcccCCCcccceEec
Q 005224 2 SKLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQLNGSIPPGRLSL-NITTIKLSNNKLTGTIPSNFSGLPRLQRLFI 79 (707)
Q Consensus 2 ~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 79 (707)
++++.|+|++|+|++++| .|+++++|++|+|++|++++..|..+..+ +|++|+|++|++++..|..|+++++|++|+|
T Consensus 33 ~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 112 (606)
T 3t6q_A 33 NSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFF 112 (606)
T ss_dssp TTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEEC
T ss_pred CcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEeec
Confidence 368999999999999987 79999999999999999995556666666 8999999999999889999999999999999
Q ss_pred cCcccccCCCCCccccccCCCCccceEEccCccCCCC--CCCCCCCCCceeeccCCCccc
Q 005224 80 ANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNI--SGSFNIPPNVTVRLRGNPFCL 137 (707)
Q Consensus 80 s~N~l~g~~p~~~~~l~~L~~~~L~~l~l~~N~l~~~--~~~~~~~~l~~l~l~~N~~~~ 137 (707)
++|++++..|..+.++++|+ +|+|++|+++++ +....+++|+.|++++|.+..
T Consensus 113 ~~n~i~~l~~~~~~~l~~L~-----~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~ 167 (606)
T 3t6q_A 113 IQTGISSIDFIPLHNQKTLE-----SLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHY 167 (606)
T ss_dssp TTSCCSCGGGSCCTTCTTCC-----EEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCE
T ss_pred cccCcccCCcchhccCCccc-----EEECCCCcccccCcccccCCcccCEEEcccCcccc
Confidence 99999965577787776665 999999999997 444488999999999999864
No 339
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.45 E-value=1.2e-13 Score=144.43 Aligned_cols=127 Identities=25% Similarity=0.418 Sum_probs=94.6
Q ss_pred CCCceEEEeeCCcCCCCCCCcCCCCcccEEeccCCcCcccCCCccccc-CccEEEccCccCCCCCCcccCCCcccceEec
Q 005224 1 MSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSL-NITTIKLSNNKLTGTIPSNFSGLPRLQRLFI 79 (707)
Q Consensus 1 L~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 79 (707)
|++|+.|+|++|+|+++ +.+..+++|++|+|++|+|+ .+|. +..+ +|+.|+|++|++++. +. +..+++|+.|+|
T Consensus 84 l~~L~~L~L~~n~l~~~-~~~~~l~~L~~L~l~~n~l~-~~~~-l~~l~~L~~L~l~~n~l~~~-~~-l~~l~~L~~L~l 158 (308)
T 1h6u_A 84 LTKITELELSGNPLKNV-SAIAGLQSIKTLDLTSTQIT-DVTP-LAGLSNLQVLYLDLNQITNI-SP-LAGLTNLQYLSI 158 (308)
T ss_dssp CCSCCEEECCSCCCSCC-GGGTTCTTCCEEECTTSCCC-CCGG-GTTCTTCCEEECCSSCCCCC-GG-GGGCTTCCEEEC
T ss_pred CCCCCEEEccCCcCCCc-hhhcCCCCCCEEECCCCCCC-Cchh-hcCCCCCCEEECCCCccCcC-cc-ccCCCCccEEEc
Confidence 46788899999988875 46888888888888888888 5664 3333 788888888888843 33 788888888888
Q ss_pred cCcccccCCCCCccccccCCCCccceEEccCccCCCCCCCCCCCCCceeeccCCCccccC
Q 005224 80 ANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSFNIPPNVTVRLRGNPFCLNT 139 (707)
Q Consensus 80 s~N~l~g~~p~~~~~l~~L~~~~L~~l~l~~N~l~~~~~~~~~~~l~~l~l~~N~~~~~~ 139 (707)
++|+++ .++. +..+++|+ .|+|++|+++++++...+++|+.|++++|++....
T Consensus 159 ~~n~l~-~~~~-l~~l~~L~-----~L~l~~n~l~~~~~l~~l~~L~~L~L~~N~l~~~~ 211 (308)
T 1h6u_A 159 GNAQVS-DLTP-LANLSKLT-----TLKADDNKISDISPLASLPNLIEVHLKNNQISDVS 211 (308)
T ss_dssp CSSCCC-CCGG-GTTCTTCC-----EEECCSSCCCCCGGGGGCTTCCEEECTTSCCCBCG
T ss_pred cCCcCC-CChh-hcCCCCCC-----EEECCCCccCcChhhcCCCCCCEEEccCCccCccc
Confidence 888888 4444 55544444 78888888887766447777888888888776543
No 340
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.45 E-value=3.1e-13 Score=159.22 Aligned_cols=125 Identities=23% Similarity=0.350 Sum_probs=81.2
Q ss_pred CceEEEeeCCcCCCCCCC-cCCCCcccEEeccCCcCcccCCCccccc---------CccEEEccCccCCCCCCcccC--C
Q 005224 3 KLLKLSLRNCSLQGPMPD-LSRIPNLGYLDLSSNQLNGSIPPGRLSL---------NITTIKLSNNKLTGTIPSNFS--G 70 (707)
Q Consensus 3 ~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~g~ip~~~~~~---------~L~~L~Ls~N~l~~~~p~~~~--~ 70 (707)
+|+.|+|++|+|+.+++. +..+++|+.|+|++|+|+ .+|...+.. +|+.|+|++|+|+ .+|..+. .
T Consensus 674 ~L~~L~Ls~N~L~~lp~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~ 751 (876)
T 4ecn_A 674 NASTVTLSYNEIQKFPTELFATGSPISTIILSNNLMT-SIPENSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATT 751 (876)
T ss_dssp CEEEEECCSSCCCSCCHHHHHTTCCCSEEECCSCCCS-CCCTTSSSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTT
T ss_pred CcCEEEccCCcCCccCHHHHccCCCCCEEECCCCcCC-ccChHHhccccccccccCCccEEECCCCCCc-cchHHhhhcc
Confidence 677777777777755443 346677777777777777 777655431 5777777777777 6666665 6
Q ss_pred CcccceEeccCcccccCCCCCccccccCCCCccceEEccC------ccCCCC-CCCC-CCCCCceeeccCCCc
Q 005224 71 LPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQN------NNLTNI-SGSF-NIPPNVTVRLRGNPF 135 (707)
Q Consensus 71 l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~~~L~~l~l~~------N~l~~~-~~~~-~~~~l~~l~l~~N~~ 135 (707)
+++|+.|+|++|+|++ +|..+..+++|+ .|+|++ |++.+. |..+ .+++|+.|+|++|++
T Consensus 752 l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~-----~L~Ls~N~~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L 818 (876)
T 4ecn_A 752 LPYLSNMDVSYNCFSS-FPTQPLNSSQLK-----AFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSNDI 818 (876)
T ss_dssp CTTCCEEECCSSCCSS-CCCGGGGCTTCC-----EEECCCCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC
T ss_pred CCCcCEEEeCCCCCCc-cchhhhcCCCCC-----EEECCCCCCcccccccccChHHHhcCCCCCEEECCCCCC
Confidence 7777777777777774 666666655554 666655 444443 4344 566677777777766
No 341
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.45 E-value=2.6e-13 Score=138.39 Aligned_cols=126 Identities=25% Similarity=0.312 Sum_probs=100.3
Q ss_pred CCCceEEEeeCCcCCCCCCCcCCCCcccEEeccCCcCcccCCCcccccCccEEEccCccCCCCCCcccCCCcccceEecc
Q 005224 1 MSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIA 80 (707)
Q Consensus 1 L~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls 80 (707)
+++|+.|+|++|+|+++++ +..+++|++|+|++|+|+ .+|.... .+|+.|+|++|+|++ ++ .+.++++|+.|+|+
T Consensus 62 l~~L~~L~L~~N~i~~~~~-l~~l~~L~~L~L~~N~l~-~l~~~~~-~~L~~L~L~~N~l~~-~~-~l~~l~~L~~L~Ls 136 (263)
T 1xeu_A 62 FTNLKELHLSHNQISDLSP-LKDLTKLEELSVNRNRLK-NLNGIPS-ACLSRLFLDNNELRD-TD-SLIHLKNLEILSIR 136 (263)
T ss_dssp CTTCCEEECCSSCCCCCGG-GTTCSSCCEEECCSSCCS-CCTTCCC-SSCCEEECCSSCCSB-SG-GGTTCTTCCEEECT
T ss_pred CCCCCEEECCCCccCCChh-hccCCCCCEEECCCCccC-CcCcccc-CcccEEEccCCccCC-Ch-hhcCcccccEEECC
Confidence 4678899999999988777 888899999999999998 6776544 588999999999985 44 58888899999999
Q ss_pred CcccccCCCCCccccccCCCCccceEEccCccCCCCCCCCCCCCCceeeccCCCcccc
Q 005224 81 NNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSFNIPPNVTVRLRGNPFCLN 138 (707)
Q Consensus 81 ~N~l~g~~p~~~~~l~~L~~~~L~~l~l~~N~l~~~~~~~~~~~l~~l~l~~N~~~~~ 138 (707)
+|+|+ .+| .+..+++|+ .|+|++|+|++++....+++|+.|++++|++.+.
T Consensus 137 ~N~i~-~~~-~l~~l~~L~-----~L~L~~N~i~~~~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 137 NNKLK-SIV-MLGFLSKLE-----VLDLHGNEITNTGGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp TSCCC-BCG-GGGGCTTCC-----EEECTTSCCCBCTTSTTCCCCCEEEEEEEEEECC
T ss_pred CCcCC-CCh-HHccCCCCC-----EEECCCCcCcchHHhccCCCCCEEeCCCCcccCC
Confidence 99988 454 566655554 8999999998883333788888999999888655
No 342
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.45 E-value=2.5e-13 Score=155.27 Aligned_cols=127 Identities=20% Similarity=0.273 Sum_probs=57.3
Q ss_pred CCceEEEeeCCcCCCCCC-CcCCCCcccEEeccCCcCcccCCCcc-ccc-CccEEEccCccCCCCCCcccCCCcccceEe
Q 005224 2 SKLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQLNGSIPPGR-LSL-NITTIKLSNNKLTGTIPSNFSGLPRLQRLF 78 (707)
Q Consensus 2 ~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~g~ip~~~-~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 78 (707)
++|+.|+|++|.|+++++ .|+.+++|++|+|++|.|+ .+|+.. ..+ +|+.|+|++|+|++..+..|+++++|++|+
T Consensus 75 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~ 153 (597)
T 3oja_B 75 RQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIR-YLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLS 153 (597)
T ss_dssp CCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCC-CCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEE
Confidence 344555555555554444 4445555555555555555 233222 222 455555555555533333344455555555
Q ss_pred ccCcccccCCCCCccccccCCCCccceEEccCccCCCCCCCCCCCCCceeeccCCCc
Q 005224 79 IANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSFNIPPNVTVRLRGNPF 135 (707)
Q Consensus 79 ls~N~l~g~~p~~~~~l~~L~~~~L~~l~l~~N~l~~~~~~~~~~~l~~l~l~~N~~ 135 (707)
|++|.|++..|..+..+++|+ .|+|++|+|++++.. .+++|..|++++|.+
T Consensus 154 Ls~N~l~~~~~~~~~~l~~L~-----~L~L~~N~l~~~~~~-~l~~L~~L~l~~n~l 204 (597)
T 3oja_B 154 MSNNNLERIEDDTFQATTSLQ-----NLQLSSNRLTHVDLS-LIPSLFHANVSYNLL 204 (597)
T ss_dssp CCSSCCCBCCTTTTTTCTTCC-----EEECTTSCCSBCCGG-GCTTCSEEECCSSCC
T ss_pred eeCCcCCCCChhhhhcCCcCc-----EEECcCCCCCCcChh-hhhhhhhhhcccCcc
Confidence 555555544444444433333 455555555444211 344444444444443
No 343
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.45 E-value=1.4e-13 Score=142.51 Aligned_cols=125 Identities=21% Similarity=0.261 Sum_probs=106.8
Q ss_pred CCCceEEEeeCCcCCCCCCCcCCCCcccEEeccCCcCcccCCCccccc-CccEEEccCccCCCCCCcccCCCcccceEec
Q 005224 1 MSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSL-NITTIKLSNNKLTGTIPSNFSGLPRLQRLFI 79 (707)
Q Consensus 1 L~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 79 (707)
|++|+.|+|++|+|+++ +.+..+++|++|+|++|+|+ .++ .+..+ +|+.|+|++|+|++. ..+..+++|+.|+|
T Consensus 89 l~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~L~~n~i~-~~~-~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L 163 (291)
T 1h6t_A 89 LKNLGWLFLDENKVKDL-SSLKDLKKLKSLSLEHNGIS-DIN-GLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSL 163 (291)
T ss_dssp CTTCCEEECCSSCCCCG-GGGTTCTTCCEEECTTSCCC-CCG-GGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEEC
T ss_pred CCCCCEEECCCCcCCCC-hhhccCCCCCEEECCCCcCC-CCh-hhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEc
Confidence 57899999999999974 45999999999999999999 664 34444 899999999999954 67999999999999
Q ss_pred cCcccccCCCCCccccccCCCCccceEEccCccCCCCCCCCCCCCCceeeccCCCccc
Q 005224 80 ANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSFNIPPNVTVRLRGNPFCL 137 (707)
Q Consensus 80 s~N~l~g~~p~~~~~l~~L~~~~L~~l~l~~N~l~~~~~~~~~~~l~~l~l~~N~~~~ 137 (707)
++|++++. +. +..+++| +.|+|++|+|+.++....+++|+.|++++|++..
T Consensus 164 ~~N~l~~~-~~-l~~l~~L-----~~L~L~~N~i~~l~~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 164 EDNQISDI-VP-LAGLTKL-----QNLYLSKNHISDLRALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp CSSCCCCC-GG-GTTCTTC-----CEEECCSSCCCBCGGGTTCTTCSEEEEEEEEEEC
T ss_pred cCCccccc-hh-hcCCCcc-----CEEECCCCcCCCChhhccCCCCCEEECcCCcccC
Confidence 99999954 43 6665555 4999999999999764589999999999999865
No 344
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.44 E-value=3e-13 Score=142.81 Aligned_cols=126 Identities=21% Similarity=0.272 Sum_probs=67.9
Q ss_pred CceEEEeeCCcCCCCCC-CcCCCCcccEEeccCCcCcccCCCccccc-CccEEEccCccCCCCCCcccCCCcccceEecc
Q 005224 3 KLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQLNGSIPPGRLSL-NITTIKLSNNKLTGTIPSNFSGLPRLQRLFIA 80 (707)
Q Consensus 3 ~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls 80 (707)
+|+.|+|++|+|+++++ .|.++++|++|+|++|+|++..|..+..+ +|++|+|++|+|+ .+|..+. ++|++|+|+
T Consensus 55 ~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~--~~L~~L~l~ 131 (332)
T 2ft3_A 55 DTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLV-EIPPNLP--SSLVELRIH 131 (332)
T ss_dssp TCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSSCCC-SCCSSCC--TTCCEEECC
T ss_pred CCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCCcCC-ccCcccc--ccCCEEECC
Confidence 46666666666666655 46666666666666666663334444333 5666666666666 4555443 566666666
Q ss_pred CcccccCCCCCccccccCCCCccceEEccCccCCC--C-CCCCCCCCCceeeccCCCcc
Q 005224 81 NNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTN--I-SGSFNIPPNVTVRLRGNPFC 136 (707)
Q Consensus 81 ~N~l~g~~p~~~~~l~~L~~~~L~~l~l~~N~l~~--~-~~~~~~~~l~~l~l~~N~~~ 136 (707)
+|++++..+..+..+++|+ .|++++|.++. + +..+...+|+.|++++|.+.
T Consensus 132 ~n~i~~~~~~~~~~l~~L~-----~L~l~~n~l~~~~~~~~~~~~l~L~~L~l~~n~l~ 185 (332)
T 2ft3_A 132 DNRIRKVPKGVFSGLRNMN-----CIEMGGNPLENSGFEPGAFDGLKLNYLRISEAKLT 185 (332)
T ss_dssp SSCCCCCCSGGGSSCSSCC-----EEECCSCCCBGGGSCTTSSCSCCCSCCBCCSSBCS
T ss_pred CCccCccCHhHhCCCccCC-----EEECCCCccccCCCCcccccCCccCEEECcCCCCC
Confidence 6666633333344444433 56666666542 2 22221115555555555544
No 345
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.44 E-value=2.7e-13 Score=161.32 Aligned_cols=132 Identities=20% Similarity=0.239 Sum_probs=114.7
Q ss_pred CCceEEEeeCCcCCCCCC-CcCCCCcccEEeccCCcCcccCCCc-cccc-CccEEEccCccCCCCCCcccCCCcccceEe
Q 005224 2 SKLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQLNGSIPPG-RLSL-NITTIKLSNNKLTGTIPSNFSGLPRLQRLF 78 (707)
Q Consensus 2 ~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~g~ip~~-~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 78 (707)
++|+.|||++|.|+++.+ .|.++++|++|+|++|.+.+.|++. +..+ +|++|+|++|+|++..|..|.++++|++|+
T Consensus 24 ~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 103 (844)
T 3j0a_A 24 NTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELR 103 (844)
T ss_dssp TTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCEE
T ss_pred CCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCEee
Confidence 679999999999999887 7999999999999999777788554 4444 899999999999988899999999999999
Q ss_pred ccCcccccCCCCC--ccccccCCCCccceEEccCccCCCCCC--CC-CCCCCceeeccCCCcccc
Q 005224 79 IANNSLSGSIPSS--IWQSRTLNATETFILDFQNNNLTNISG--SF-NIPPNVTVRLRGNPFCLN 138 (707)
Q Consensus 79 ls~N~l~g~~p~~--~~~l~~L~~~~L~~l~l~~N~l~~~~~--~~-~~~~l~~l~l~~N~~~~~ 138 (707)
|++|.+++.+|.. +.++++|+ +|+|++|.+++++. .+ .+++|+.|++++|.+...
T Consensus 104 Ls~n~l~~~~~~~~~~~~L~~L~-----~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~ 163 (844)
T 3j0a_A 104 LYFCGLSDAVLKDGYFRNLKALT-----RLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLV 163 (844)
T ss_dssp CTTCCCSSCCSTTCCCSSCSSCC-----EEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCC
T ss_pred CcCCCCCcccccCccccccCCCC-----EEECCCCcccccccchhHhhCCCCCEEECCCCcCCee
Confidence 9999999877765 77766655 99999999998854 34 899999999999998654
No 346
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.43 E-value=1.5e-13 Score=154.34 Aligned_cols=129 Identities=22% Similarity=0.189 Sum_probs=96.1
Q ss_pred CCceEEEeeCCcCCCCCCCcCCCCcccEEeccCCcCcccCCCccccc-CccEEEccCccCCC--CCCcccCCCcccceEe
Q 005224 2 SKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSL-NITTIKLSNNKLTG--TIPSNFSGLPRLQRLF 78 (707)
Q Consensus 2 ~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~-~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~ 78 (707)
.+|+.|++++|++.... .+..+++|++|+|++|++++.+|..+..+ +|+.|+|++|+|++ .+|..|.++++|++|+
T Consensus 302 ~~L~~L~l~~n~l~~~~-~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~ 380 (520)
T 2z7x_B 302 MNIKNFTVSGTRMVHML-CPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLD 380 (520)
T ss_dssp CCCSEEEEESSCCCCCC-CCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEE
T ss_pred CceeEEEcCCCcccccc-chhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEE
Confidence 46999999999987543 23789999999999999998788877766 89999999999996 5678899999999999
Q ss_pred ccCcccccCCCCC-ccccccCCCCccceEEccCccCCCCCCCCCCCCCceeeccCCCcc
Q 005224 79 IANNSLSGSIPSS-IWQSRTLNATETFILDFQNNNLTNISGSFNIPPNVTVRLRGNPFC 136 (707)
Q Consensus 79 ls~N~l~g~~p~~-~~~l~~L~~~~L~~l~l~~N~l~~~~~~~~~~~l~~l~l~~N~~~ 136 (707)
|++|++++.+|.. +..+++|+ .|+|++|++++..+..-.++|+.|++++|.+.
T Consensus 381 Ls~N~l~~~l~~~~~~~l~~L~-----~L~Ls~N~l~~~~~~~l~~~L~~L~Ls~N~l~ 434 (520)
T 2z7x_B 381 ISQNSVSYDEKKGDCSWTKSLL-----SLNMSSNILTDTIFRCLPPRIKVLDLHSNKIK 434 (520)
T ss_dssp CCSSCCBCCGGGCSCCCCTTCC-----EEECCSSCCCGGGGGSCCTTCCEEECCSSCCC
T ss_pred CCCCcCCcccccchhccCccCC-----EEECcCCCCCcchhhhhcccCCEEECCCCccc
Confidence 9999999768765 44444443 56666665543211110145555555555554
No 347
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.43 E-value=4.6e-13 Score=144.69 Aligned_cols=130 Identities=22% Similarity=0.332 Sum_probs=93.9
Q ss_pred CCCceEEEeeCCcCCCCCCC-cCCCCcccEEeccCCcCcccCCC-ccccc-CccEEEccCccCCCCCCcccCCCcccceE
Q 005224 1 MSKLLKLSLRNCSLQGPMPD-LSRIPNLGYLDLSSNQLNGSIPP-GRLSL-NITTIKLSNNKLTGTIPSNFSGLPRLQRL 77 (707)
Q Consensus 1 L~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~g~ip~-~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 77 (707)
+++|+.|++++|.++.+++. |..+++|++|+|++|.++ .++. .+..+ +|++|+|++|++++..|..|.++++|++|
T Consensus 44 l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 122 (390)
T 3o6n_A 44 LNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIE-EIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVL 122 (390)
T ss_dssp GCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCC-EECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred cCCceEEEecCCchhhCChhHhcccccCcEEECCCCccc-ccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEE
Confidence 35677888888888777663 677888888888888887 5554 34334 78888888888887767777888888888
Q ss_pred eccCcccccCCCCC-ccccccCCCCccceEEccCccCCCCCCC-C-CCCCCceeeccCCCccc
Q 005224 78 FIANNSLSGSIPSS-IWQSRTLNATETFILDFQNNNLTNISGS-F-NIPPNVTVRLRGNPFCL 137 (707)
Q Consensus 78 ~ls~N~l~g~~p~~-~~~l~~L~~~~L~~l~l~~N~l~~~~~~-~-~~~~l~~l~l~~N~~~~ 137 (707)
+|++|+++ .+|.. +.++++|+ +|+|++|+++++++. + .+++|+.|++++|.+..
T Consensus 123 ~L~~n~l~-~l~~~~~~~l~~L~-----~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 179 (390)
T 3o6n_A 123 VLERNDLS-SLPRGIFHNTPKLT-----TLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTH 179 (390)
T ss_dssp ECCSSCCC-CCCTTTTTTCTTCC-----EEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSB
T ss_pred ECCCCccC-cCCHHHhcCCCCCc-----EEECCCCccCccChhhccCCCCCCEEECCCCcCCc
Confidence 88888887 55554 35555444 788888888877554 3 67778888888887654
No 348
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.43 E-value=4.3e-13 Score=140.05 Aligned_cols=122 Identities=21% Similarity=0.296 Sum_probs=63.4
Q ss_pred CceEEEeeCCcCCCCCCCcCCCCcccEEeccCCcCcccCCCccccc-CccEEEccCccCCCCCCcccCCCcccceEeccC
Q 005224 3 KLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSL-NITTIKLSNNKLTGTIPSNFSGLPRLQRLFIAN 81 (707)
Q Consensus 3 ~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~ 81 (707)
+|+.|+|++|+++.+ +.+..+++|++|+|++|+++ .++. +..+ +|+.|+|++|+|++ ++ .+..+++|++|+|++
T Consensus 42 ~L~~L~l~~~~i~~l-~~~~~l~~L~~L~L~~n~i~-~~~~-~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~l~~ 116 (308)
T 1h6u_A 42 GITTLSAFGTGVTTI-EGVQYLNNLIGLELKDNQIT-DLAP-LKNLTKITELELSGNPLKN-VS-AIAGLQSIKTLDLTS 116 (308)
T ss_dssp TCCEEECTTSCCCCC-TTGGGCTTCCEEECCSSCCC-CCGG-GTTCCSCCEEECCSCCCSC-CG-GGTTCTTCCEEECTT
T ss_pred CcCEEEeeCCCccCc-hhhhccCCCCEEEccCCcCC-CChh-HccCCCCCEEEccCCcCCC-ch-hhcCCCCCCEEECCC
Confidence 455666666655543 34555566666666666665 4444 3322 55666666666553 32 455555566666666
Q ss_pred cccccCCCCCccccccCCCCccceEEccCccCCCCCCCCCCCCCceeeccCCCcc
Q 005224 82 NSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSFNIPPNVTVRLRGNPFC 136 (707)
Q Consensus 82 N~l~g~~p~~~~~l~~L~~~~L~~l~l~~N~l~~~~~~~~~~~l~~l~l~~N~~~ 136 (707)
|+++ .+|. +..+++| +.|+|++|+++++++...+++|+.|++++|.+.
T Consensus 117 n~l~-~~~~-l~~l~~L-----~~L~l~~n~l~~~~~l~~l~~L~~L~l~~n~l~ 164 (308)
T 1h6u_A 117 TQIT-DVTP-LAGLSNL-----QVLYLDLNQITNISPLAGLTNLQYLSIGNAQVS 164 (308)
T ss_dssp SCCC-CCGG-GTTCTTC-----CEEECCSSCCCCCGGGGGCTTCCEEECCSSCCC
T ss_pred CCCC-Cchh-hcCCCCC-----CEEECCCCccCcCccccCCCCccEEEccCCcCC
Confidence 6555 2332 3333333 255555555555544224555555555555543
No 349
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.43 E-value=3.6e-13 Score=152.90 Aligned_cols=134 Identities=16% Similarity=0.228 Sum_probs=98.2
Q ss_pred CCceEEEeeCCcCCCCCCCcCCCCcccEEeccCCcCcccCCCccccc-CccEEEccCccCCC--CCCcccCCCcccceEe
Q 005224 2 SKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSL-NITTIKLSNNKLTG--TIPSNFSGLPRLQRLF 78 (707)
Q Consensus 2 ~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~-~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~ 78 (707)
.+|+.|++++|++.... .+..+++|++|+|++|++++.+|..+..+ +|+.|+|++|+|++ .+|..|.++++|+.|+
T Consensus 331 ~~L~~L~l~~n~~~~~~-~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~ 409 (562)
T 3a79_B 331 MNIKMLSISDTPFIHMV-CPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLD 409 (562)
T ss_dssp CCCSEEEEESSCCCCCC-CCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEE
T ss_pred CcceEEEccCCCccccc-CccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEE
Confidence 36999999999986433 23789999999999999997788877766 89999999999996 3356799999999999
Q ss_pred ccCcccccCCCCC-ccccccCC----------------C-CccceEEccCccCCCCCCCC-CCCCCceeeccCCCcc
Q 005224 79 IANNSLSGSIPSS-IWQSRTLN----------------A-TETFILDFQNNNLTNISGSF-NIPPNVTVRLRGNPFC 136 (707)
Q Consensus 79 ls~N~l~g~~p~~-~~~l~~L~----------------~-~~L~~l~l~~N~l~~~~~~~-~~~~l~~l~l~~N~~~ 136 (707)
|++|++++.+|.. +..+++|+ + ++|+.|+|++|+|+.+|..+ .+++|+.|++++|.+.
T Consensus 410 l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~~L~~L~L~~N~l~~ip~~~~~l~~L~~L~L~~N~l~ 486 (562)
T 3a79_B 410 VSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLPPKVKVLDLHNNRIMSIPKDVTHLQALQELNVASNQLK 486 (562)
T ss_dssp CTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCCTTCSEEECCSSCCCCCCTTTTSSCCCSEEECCSSCCC
T ss_pred CCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhcCcCCEEECCCCcCcccChhhcCCCCCCEEECCCCCCC
Confidence 9999999767765 44444332 0 24455555555555555443 4555555555555554
No 350
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.42 E-value=1.6e-13 Score=145.88 Aligned_cols=116 Identities=20% Similarity=0.207 Sum_probs=93.2
Q ss_pred cEEeccCC-cCcccCCCccccc-CccEEEccC-ccCCCCCCcccCCCcccceEeccCcccccCCCCCccccccCCCCccc
Q 005224 28 GYLDLSSN-QLNGSIPPGRLSL-NITTIKLSN-NKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETF 104 (707)
Q Consensus 28 ~~L~Ls~N-~l~g~ip~~~~~~-~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~~~L~ 104 (707)
..+++++| +|+ .||. +..+ +|+.|+|++ |+|++..|..|.+|++|+.|+|++|+|++..|..|.++++|+
T Consensus 11 ~~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~----- 83 (347)
T 2ifg_A 11 SGLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLS----- 83 (347)
T ss_dssp SCEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCC-----
T ss_pred CEEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCC-----
Confidence 35688887 888 7888 6555 788888886 888877777888888899999999998887777787766665
Q ss_pred eEEccCccCCCCCCCC-CCCCCceeeccCCCccccCCcccccCCCCC
Q 005224 105 ILDFQNNNLTNISGSF-NIPPNVTVRLRGNPFCLNTNAEQFCGSHSD 150 (707)
Q Consensus 105 ~l~l~~N~l~~~~~~~-~~~~l~~l~l~~N~~~~~~~~~~~~~~~~~ 150 (707)
.|+|++|+|+++|+.. ....|+.|+|.+|+|.|+|.+..|..|...
T Consensus 84 ~L~l~~N~l~~~~~~~~~~~~L~~l~l~~N~~~c~c~l~~~~~~~~~ 130 (347)
T 2ifg_A 84 RLNLSFNALESLSWKTVQGLSLQELVLSGNPLHCSCALRWLQRWEEE 130 (347)
T ss_dssp EEECCSSCCSCCCSTTTCSCCCCEEECCSSCCCCCGGGHHHHHHHHT
T ss_pred EEeCCCCccceeCHHHcccCCceEEEeeCCCccCCCccHHHHHHHHh
Confidence 8899999998887764 434489999999999999998888777543
No 351
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.42 E-value=1.2e-13 Score=153.81 Aligned_cols=130 Identities=21% Similarity=0.194 Sum_probs=76.8
Q ss_pred CCceEEEeeCCcCCCCCC-CcCCCCcccEEeccCCcCcccCCCccccc-CccEEEccCccCCCCCCc-------------
Q 005224 2 SKLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQLNGSIPPGRLSL-NITTIKLSNNKLTGTIPS------------- 66 (707)
Q Consensus 2 ~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~-~L~~L~Ls~N~l~~~~p~------------- 66 (707)
++|+.|+|++|+|++++| .|..+++|++|+|++|.|++.+| +..+ +|+.|+|++|+|++..+.
T Consensus 34 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~~~~L~~L~L~~N~l 111 (487)
T 3oja_A 34 WNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLVGPSIETLHAANNNI 111 (487)
T ss_dssp GGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEECTTCCEEECCSSCC
T ss_pred CCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCCCCCcCEEECcCCcC
Confidence 368888888888888776 68888888888888888885444 2222 455555555544421110
Q ss_pred ---ccCCCcccceEeccCcccccCCCCCccccccCCCCccceEEccCccCCCCCC-CC--CCCCCceeeccCCCcccc
Q 005224 67 ---NFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISG-SF--NIPPNVTVRLRGNPFCLN 138 (707)
Q Consensus 67 ---~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~~~L~~l~l~~N~l~~~~~-~~--~~~~l~~l~l~~N~~~~~ 138 (707)
....+++|+.|+|++|.|++..|..+..+++|+ .|+|++|+|+++++ .+ .+++|..|+|++|.+...
T Consensus 112 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~-----~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~ 184 (487)
T 3oja_A 112 SRVSCSRGQGKKNIYLANNKITMLRDLDEGCRSRVQ-----YLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV 184 (487)
T ss_dssp CCEEECCCSSCEEEECCSSCCCSGGGBCGGGGSSEE-----EEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE
T ss_pred CCCCccccCCCCEEECCCCCCCCCCchhhcCCCCCC-----EEECCCCCCCCcChHHHhhhCCcccEEecCCCccccc
Confidence 011234566666666666655555555544433 66666666666432 22 356666666666665433
No 352
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.42 E-value=3.3e-14 Score=165.73 Aligned_cols=129 Identities=21% Similarity=0.275 Sum_probs=110.8
Q ss_pred CCCceEEEeeCCcCCCCCCCcCCCCcccEEeccCCcCcccCCCccccc-CccEEEccCccCCCCCCcccCCCcccceEec
Q 005224 1 MSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSL-NITTIKLSNNKLTGTIPSNFSGLPRLQRLFI 79 (707)
Q Consensus 1 L~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 79 (707)
+++|+.|+|++|+|..+++.+.++++|++|+|++|.|+ .||..+..+ +|+.|+|++|+|+ .+|..|++|++|++|+|
T Consensus 223 l~~L~~L~Ls~n~l~~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L 300 (727)
T 4b8c_D 223 DQLWHALDLSNLQIFNISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYF 300 (727)
T ss_dssp CCCCCEEECTTSCCSCCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEEC
T ss_pred CCCCcEEECCCCCCCCCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEEC
Confidence 46799999999999977778889999999999999999 999888777 8999999999999 88999999999999999
Q ss_pred cCcccccCCCCCccccccCCCCccceEEccCccCCCCCCCC-C-C-CCCceeeccCCCccc
Q 005224 80 ANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSF-N-I-PPNVTVRLRGNPFCL 137 (707)
Q Consensus 80 s~N~l~g~~p~~~~~l~~L~~~~L~~l~l~~N~l~~~~~~~-~-~-~~l~~l~l~~N~~~~ 137 (707)
++|.|+ .+|..+..+++|+ .|+|++|+|++.++.. . + ..+..++|++|.+.+
T Consensus 301 ~~N~l~-~lp~~~~~l~~L~-----~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~ 355 (727)
T 4b8c_D 301 FDNMVT-TLPWEFGNLCNLQ-----FLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEI 355 (727)
T ss_dssp CSSCCC-CCCSSTTSCTTCC-----CEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_pred CCCCCC-ccChhhhcCCCcc-----EEeCCCCccCCCChHHHhhcchhhhHHhhccCcccC
Confidence 999998 9999998877666 9999999999865432 1 1 112346788888754
No 353
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.42 E-value=5.2e-13 Score=126.54 Aligned_cols=107 Identities=21% Similarity=0.172 Sum_probs=90.1
Q ss_pred ceEEEeeCCcCCCCCCCcCCCCcccEEeccCCcCcccCC-Cccccc-CccEEEccCccCCCCCCcccCCCcccceEeccC
Q 005224 4 LLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIP-PGRLSL-NITTIKLSNNKLTGTIPSNFSGLPRLQRLFIAN 81 (707)
Q Consensus 4 L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~ip-~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~ 81 (707)
.+.|++++|+|+.++..+. ++|++|+|++|+|+ .++ ..+..+ +|+.|+|++|+|++..+..|.++++|++|+|++
T Consensus 11 ~~~l~~s~n~l~~ip~~~~--~~l~~L~L~~N~i~-~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 11 GTTVDCSGKSLASVPTGIP--TTTQVLYLYDNQIT-KLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TTEEECTTSCCSSCCSCCC--TTCSEEECCSSCCC-CCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcCccCccCC--CCCcEEEcCCCcCC-ccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 5789999999998777664 89999999999999 554 445555 899999999999977777889999999999999
Q ss_pred cccccCCCCCccccccCCCCccceEEccCccCCCCCC
Q 005224 82 NSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISG 118 (707)
Q Consensus 82 N~l~g~~p~~~~~l~~L~~~~L~~l~l~~N~l~~~~~ 118 (707)
|+|++..+..+..+++|+ +|+|++|.++...+
T Consensus 88 N~l~~~~~~~~~~l~~L~-----~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 88 NQLKSIPRGAFDNLKSLT-----HIWLLNNPWDCACS 119 (170)
T ss_dssp SCCCCCCTTTTTTCTTCC-----EEECCSSCBCTTBG
T ss_pred CccCEeCHHHhcCCCCCC-----EEEeCCCCCCCCch
Confidence 999965555677766665 99999999987543
No 354
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.41 E-value=2.5e-13 Score=144.78 Aligned_cols=130 Identities=25% Similarity=0.228 Sum_probs=94.9
Q ss_pred CCceEEEeeCCcCCCCCC-CcCCCCcccEEeccCCcCcccCCCccccc-CccEEEccCccCCCCCCcccCCCcccceEec
Q 005224 2 SKLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQLNGSIPPGRLSL-NITTIKLSNNKLTGTIPSNFSGLPRLQRLFI 79 (707)
Q Consensus 2 ~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 79 (707)
++|++|+|++|+|+++++ .|.++++|++|+|++|+|++..|..+..+ +|++|+|++|+|++..+..|.++++|++|+|
T Consensus 52 ~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 131 (353)
T 2z80_A 52 EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNL 131 (353)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEEC
T ss_pred ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEEC
Confidence 467888888888888777 68888888888888888884334444444 7888888888888544444788888888888
Q ss_pred cCcccccCCCC--CccccccCCCCccceEEccCc-cCCCCCCC-C-CCCCCceeeccCCCccc
Q 005224 80 ANNSLSGSIPS--SIWQSRTLNATETFILDFQNN-NLTNISGS-F-NIPPNVTVRLRGNPFCL 137 (707)
Q Consensus 80 s~N~l~g~~p~--~~~~l~~L~~~~L~~l~l~~N-~l~~~~~~-~-~~~~l~~l~l~~N~~~~ 137 (707)
++|+++ .+|. .+..+++|+ +|++++| .++.+++. + .+++|+.|++++|.+..
T Consensus 132 ~~n~l~-~l~~~~~~~~l~~L~-----~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~ 188 (353)
T 2z80_A 132 LGNPYK-TLGETSLFSHLTKLQ-----ILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQS 188 (353)
T ss_dssp TTCCCS-SSCSSCSCTTCTTCC-----EEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCE
T ss_pred CCCCCc-ccCchhhhccCCCCc-----EEECCCCccccccCHHHccCCCCCCEEECCCCCcCc
Confidence 888888 5665 566655554 8888888 47776543 3 67788888888887643
No 355
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.41 E-value=2.3e-13 Score=153.93 Aligned_cols=131 Identities=21% Similarity=0.222 Sum_probs=109.1
Q ss_pred CCceEEEeeCCcCCCCCC-CcCCCCcccEEeccCCcCcccCCCccccc-CccEEEccCccCCCCCCcccCCCcccceEec
Q 005224 2 SKLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQLNGSIPPGRLSL-NITTIKLSNNKLTGTIPSNFSGLPRLQRLFI 79 (707)
Q Consensus 2 ~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 79 (707)
++|++|+|++|+|++++| .|.++++|++|+|++|+|++..|..+..+ +|++|+|++|+|++..|..|+++++|++|+|
T Consensus 26 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 105 (549)
T 2z81_A 26 AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNL 105 (549)
T ss_dssp TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEEC
T ss_pred CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEEC
Confidence 478999999999999887 79999999999999999995444555555 8999999999999777777999999999999
Q ss_pred cCccccc-CCCCCccccccCCCCccceEEccCcc-CCCCCC-CC-CCCCCceeeccCCCccc
Q 005224 80 ANNSLSG-SIPSSIWQSRTLNATETFILDFQNNN-LTNISG-SF-NIPPNVTVRLRGNPFCL 137 (707)
Q Consensus 80 s~N~l~g-~~p~~~~~l~~L~~~~L~~l~l~~N~-l~~~~~-~~-~~~~l~~l~l~~N~~~~ 137 (707)
++|++++ .+|..+.++++|+ +|+|++|+ +..++. .+ .+++|+.|++++|.+..
T Consensus 106 s~n~l~~~~~~~~~~~l~~L~-----~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~ 162 (549)
T 2z81_A 106 MGNPYQTLGVTSLFPNLTNLQ-----TLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRN 162 (549)
T ss_dssp TTCCCSSSCSSCSCTTCTTCC-----EEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCE
T ss_pred CCCcccccchhhhhhccCCcc-----EEECCCCccccccCHhhhhcccccCeeeccCCcccc
Confidence 9999986 4567777766665 99999998 666764 34 78889999999998754
No 356
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.41 E-value=4.3e-13 Score=152.56 Aligned_cols=125 Identities=23% Similarity=0.429 Sum_probs=86.1
Q ss_pred CCCceEEEeeCCcCCCCCCCcCCCCcccEEeccCCcCcccCCCccccc-CccEEEccCccCCCCCCcccCCCcccceEec
Q 005224 1 MSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSL-NITTIKLSNNKLTGTIPSNFSGLPRLQRLFI 79 (707)
Q Consensus 1 L~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 79 (707)
|++|+.|+|++|+|+++++ +..+++|+.|+|++|+|+ .+| .+..+ +|+.|+|++|+|++ + ..|..|++|+.|+|
T Consensus 64 l~~L~~L~Ls~N~l~~~~~-l~~l~~L~~L~Ls~N~l~-~l~-~l~~l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~L 138 (605)
T 1m9s_A 64 LPNVTKLFLNGNKLTDIKP-LTNLKNLGWLFLDENKIK-DLS-SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYL 138 (605)
T ss_dssp CTTCCEEECTTSCCCCCGG-GGGCTTCCEEECCSSCCC-CCT-TSTTCTTCCEEECTTSCCCC-C-GGGGGCTTCSEEEC
T ss_pred CCCCCEEEeeCCCCCCChh-hccCCCCCEEECcCCCCC-CCh-hhccCCCCCEEEecCCCCCC-C-ccccCCCccCEEEC
Confidence 4678888888888887666 777888888888888887 555 33333 67777777777774 3 34777777777777
Q ss_pred cCcccccCCCCCccccccCCCCccceEEccCccCCCCCCCCCCCCCceeeccCCCccc
Q 005224 80 ANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSFNIPPNVTVRLRGNPFCL 137 (707)
Q Consensus 80 s~N~l~g~~p~~~~~l~~L~~~~L~~l~l~~N~l~~~~~~~~~~~l~~l~l~~N~~~~ 137 (707)
++|+|++ + ..+..+++|+ .|+|++|+|+++++...+++|+.|+|++|++..
T Consensus 139 s~N~l~~-l-~~l~~l~~L~-----~L~Ls~N~l~~~~~l~~l~~L~~L~Ls~N~i~~ 189 (605)
T 1m9s_A 139 GNNKITD-I-TVLSRLTKLD-----TLSLEDNQISDIVPLAGLTKLQNLYLSKNHISD 189 (605)
T ss_dssp CSSCCCC-C-GGGGSCTTCS-----EEECCSSCCCCCGGGTTCTTCCEEECCSSCCCB
T ss_pred CCCccCC-c-hhhcccCCCC-----EEECcCCcCCCchhhccCCCCCEEECcCCCCCC
Confidence 7777773 3 3455544443 777777777776553366777777777776654
No 357
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.41 E-value=6e-13 Score=151.39 Aligned_cols=123 Identities=21% Similarity=0.287 Sum_probs=54.5
Q ss_pred CCceEEEeeCCcCCCCCCCcCCCCcccEEeccCCcCcccCCCccccc-CccEEEccCccCCCCCCcccCCCcccceEecc
Q 005224 2 SKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSL-NITTIKLSNNKLTGTIPSNFSGLPRLQRLFIA 80 (707)
Q Consensus 2 ~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls 80 (707)
++|+.|+|++|+|+++ +.|..+++|+.|+|++|+|+ .++. +..+ +|+.|+|++|+|++. ..|..|++|+.|+|+
T Consensus 87 ~~L~~L~Ls~N~l~~l-~~l~~l~~L~~L~Ls~N~l~-~l~~-l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls 161 (605)
T 1m9s_A 87 KNLGWLFLDENKIKDL-SSLKDLKKLKSLSLEHNGIS-DING-LVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLE 161 (605)
T ss_dssp TTCCEEECCSSCCCCC-TTSTTCTTCCEEECTTSCCC-CCGG-GGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECC
T ss_pred CCCCEEECcCCCCCCC-hhhccCCCCCEEEecCCCCC-CCcc-ccCCCccCEEECCCCccCCc--hhhcccCCCCEEECc
Confidence 3444555555554432 23444455555555555544 3322 2222 455555555555432 344444555555555
Q ss_pred CcccccCCCCCccccccCCCCccceEEccCccCCCCCCCCCCCCCceeeccCCCcc
Q 005224 81 NNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSFNIPPNVTVRLRGNPFC 136 (707)
Q Consensus 81 ~N~l~g~~p~~~~~l~~L~~~~L~~l~l~~N~l~~~~~~~~~~~l~~l~l~~N~~~ 136 (707)
+|+|++..| +..+++|+ .|+|++|+|++++....+++|+.|+|++|++.
T Consensus 162 ~N~l~~~~~--l~~l~~L~-----~L~Ls~N~i~~l~~l~~l~~L~~L~L~~N~l~ 210 (605)
T 1m9s_A 162 DNQISDIVP--LAGLTKLQ-----NLYLSKNHISDLRALAGLKNLDVLELFSQECL 210 (605)
T ss_dssp SSCCCCCGG--GTTCTTCC-----EEECCSSCCCBCGGGTTCTTCSEEECCSEEEE
T ss_pred CCcCCCchh--hccCCCCC-----EEECcCCCCCCChHHccCCCCCEEEccCCcCc
Confidence 555543322 33332222 45555555544432224444455555554443
No 358
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.41 E-value=2.6e-13 Score=128.18 Aligned_cols=111 Identities=28% Similarity=0.316 Sum_probs=94.8
Q ss_pred CCCceEEEeeCCcCCCCCCCcCCCCcccEEeccCCcCcccCCCccccc-CccEEEccCccCCCCCC--cccCCCcccceE
Q 005224 1 MSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSL-NITTIKLSNNKLTGTIP--SNFSGLPRLQRL 77 (707)
Q Consensus 1 L~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~-~L~~L~Ls~N~l~~~~p--~~~~~l~~L~~L 77 (707)
+++|+.|+|++|.|++. +.+..+++|++|+|++|++++.+|..+..+ +|+.|+|++|+|++ +| ..|..+++|+.|
T Consensus 48 l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-~~~~~~l~~l~~L~~L 125 (168)
T 2ell_A 48 FVNLEFLSLINVGLISV-SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLNLSGNKLKD-ISTLEPLKKLECLKSL 125 (168)
T ss_dssp GGGCCEEEEESSCCCCC-SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEECBSSSCCS-SGGGGGGSSCSCCCEE
T ss_pred CCCCCEEeCcCCCCCCh-hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEeccCCccCc-chhHHHHhcCCCCCEE
Confidence 46899999999999988 889999999999999999995566655434 89999999999995 44 789999999999
Q ss_pred eccCcccccCCCC----CccccccCCCCccceEEccCccCCCCCCC
Q 005224 78 FIANNSLSGSIPS----SIWQSRTLNATETFILDFQNNNLTNISGS 119 (707)
Q Consensus 78 ~ls~N~l~g~~p~----~~~~l~~L~~~~L~~l~l~~N~l~~~~~~ 119 (707)
+|++|.++ .+|. .+..+++|+ .|++++|.++.+|..
T Consensus 126 ~l~~N~l~-~~~~~~~~~~~~l~~L~-----~L~l~~n~~~~~~~~ 165 (168)
T 2ell_A 126 DLFNCEVT-NLNDYRESVFKLLPQLT-----YLDGYDREDQEAPDS 165 (168)
T ss_dssp ECCSSGGG-TSTTHHHHHHTTCSSCC-----EETTEETTSCBCCSS
T ss_pred EeeCCcCc-chHHHHHHHHHhCccCc-----EecCCCCChhhcccc
Confidence 99999999 5554 666666555 999999999988764
No 359
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.41 E-value=8.5e-13 Score=125.57 Aligned_cols=108 Identities=20% Similarity=0.178 Sum_probs=88.9
Q ss_pred ceEEEeeCCcCCCCCCCcCCCCcccEEeccCCcCcccCCCccccc-CccEEEccCccCCCCCCcccCCCcccceEeccCc
Q 005224 4 LLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSL-NITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANN 82 (707)
Q Consensus 4 L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N 82 (707)
-+.+++++|+|+.++..+. ++|++|+|++|+|++..|..+..+ +|+.|+|++|+|++..+..|.++++|++|+|++|
T Consensus 14 ~~~l~~~~n~l~~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 14 QTLVNCQNIRLASVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SSEEECCSSCCSSCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CcEEEeCCCCCCccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 3689999999998777664 899999999999994445455555 8999999999999766667899999999999999
Q ss_pred ccccCCCCCccccccCCCCccceEEccCccCCCCCC
Q 005224 83 SLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISG 118 (707)
Q Consensus 83 ~l~g~~p~~~~~l~~L~~~~L~~l~l~~N~l~~~~~ 118 (707)
+|++..+..+..+++|+ .|+|++|.++..+.
T Consensus 92 ~l~~l~~~~~~~l~~L~-----~L~L~~N~~~c~~~ 122 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLT-----HIYLYNNPWDCECR 122 (174)
T ss_dssp CCCCCCTTTTTTCTTCS-----EEECCSSCBCTTBG
T ss_pred ccceeCHHHhccccCCC-----EEEeCCCCcccccc
Confidence 99954444577766665 99999999997654
No 360
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.40 E-value=6.4e-13 Score=154.39 Aligned_cols=132 Identities=19% Similarity=0.221 Sum_probs=107.6
Q ss_pred CCceEEEeeCCcCCCCCC-CcCCCCcccEEeccCCcCcccCCCccccc-CccEEEccCccCCCCCCcccCCCcccceEec
Q 005224 2 SKLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQLNGSIPPGRLSL-NITTIKLSNNKLTGTIPSNFSGLPRLQRLFI 79 (707)
Q Consensus 2 ~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 79 (707)
++|++|+|++|+|+++++ .|.++++|++|+|++|.+++..|..+..+ +|++|+|++|+|++..+..|+++++|++|+|
T Consensus 25 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 104 (680)
T 1ziw_A 25 TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHL 104 (680)
T ss_dssp TTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEEC
T ss_pred CCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEEC
Confidence 468999999999998887 69999999999999999995445544445 8999999999999555557999999999999
Q ss_pred cCcccccCCCCCccccccCCCCccceEEccCccCCCCCCC-C-CCCCCceeeccCCCcccc
Q 005224 80 ANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGS-F-NIPPNVTVRLRGNPFCLN 138 (707)
Q Consensus 80 s~N~l~g~~p~~~~~l~~L~~~~L~~l~l~~N~l~~~~~~-~-~~~~l~~l~l~~N~~~~~ 138 (707)
++|++++..|..+.++++|+ +|+|++|+++++++. + .+++|+.|++++|.+...
T Consensus 105 ~~n~l~~~~~~~~~~l~~L~-----~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~ 160 (680)
T 1ziw_A 105 MSNSIQKIKNNPFVKQKNLI-----TLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQAL 160 (680)
T ss_dssp CSSCCCCCCSCTTTTCTTCC-----EEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCB
T ss_pred CCCccCccChhHccccCCCC-----EEECCCCcccccCchhhcccccCCEEEccCCccccc
Confidence 99999866667787776665 899999999987654 3 788899999999987543
No 361
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.40 E-value=4.5e-13 Score=153.21 Aligned_cols=132 Identities=20% Similarity=0.280 Sum_probs=113.6
Q ss_pred CCCceEEEeeCCcCCCCCC-CcCCCCcccEEeccCCcCcccCCCccccc-CccEEEccCccCCCCCCcccCCCcccceEe
Q 005224 1 MSKLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQLNGSIPPGRLSL-NITTIKLSNNKLTGTIPSNFSGLPRLQRLF 78 (707)
Q Consensus 1 L~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 78 (707)
+++++.|++++|.++.+++ .|..+++|++|+|++|.|++..|..+..+ +|+.|+|++|.|++..|..|+++++|++|+
T Consensus 50 l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 129 (597)
T 3oja_B 50 LNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLV 129 (597)
T ss_dssp GCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEE
Confidence 4678999999999999888 48899999999999999994444455555 899999999999988888999999999999
Q ss_pred ccCcccccCCCCC-ccccccCCCCccceEEccCccCCCCCCC-C-CCCCCceeeccCCCcccc
Q 005224 79 IANNSLSGSIPSS-IWQSRTLNATETFILDFQNNNLTNISGS-F-NIPPNVTVRLRGNPFCLN 138 (707)
Q Consensus 79 ls~N~l~g~~p~~-~~~l~~L~~~~L~~l~l~~N~l~~~~~~-~-~~~~l~~l~l~~N~~~~~ 138 (707)
|++|.|+ .+|.. +.++++|+ +|+|++|.|+++++. + .+++|+.|++++|.+...
T Consensus 130 L~~n~l~-~l~~~~~~~l~~L~-----~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 186 (597)
T 3oja_B 130 LERNDLS-SLPRGIFHNTPKLT-----TLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV 186 (597)
T ss_dssp CCSSCCC-CCCTTTTTTCTTCC-----EEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBC
T ss_pred eeCCCCC-CCCHHHhccCCCCC-----EEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCc
Confidence 9999999 55554 56766665 999999999999775 4 899999999999998653
No 362
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.40 E-value=6.8e-13 Score=150.63 Aligned_cols=131 Identities=25% Similarity=0.302 Sum_probs=112.3
Q ss_pred CCceEEEeeCCcCCCCCC-CcCCCCcccEEeccCCcCcccCCCc-cccc-CccEEEccCccCCCCCCcccCCCcccceEe
Q 005224 2 SKLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQLNGSIPPG-RLSL-NITTIKLSNNKLTGTIPSNFSGLPRLQRLF 78 (707)
Q Consensus 2 ~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~g~ip~~-~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 78 (707)
++|+.|+|++|+++++.+ .|.++++|++|+|++|+++ .+++. +..+ +|++|+|++|++++..|..|.++++|++|+
T Consensus 28 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~-~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 106 (570)
T 2z63_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQ-TIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLV 106 (570)
T ss_dssp SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCC-EECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEE
T ss_pred ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCC-ccCcccccCchhCCEEeCcCCcCCccCHhhhcCcccccccc
Confidence 468999999999999887 7999999999999999999 66654 4444 899999999999988889999999999999
Q ss_pred ccCcccccCCCCCccccccCCCCccceEEccCccCCC--CCCCC-CCCCCceeeccCCCcccc
Q 005224 79 IANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTN--ISGSF-NIPPNVTVRLRGNPFCLN 138 (707)
Q Consensus 79 ls~N~l~g~~p~~~~~l~~L~~~~L~~l~l~~N~l~~--~~~~~-~~~~l~~l~l~~N~~~~~ 138 (707)
|++|++++..+..+.++++|+ +|+|++|.+++ +|..+ .+++|+.|++++|.+...
T Consensus 107 L~~n~l~~l~~~~~~~l~~L~-----~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~ 164 (570)
T 2z63_A 107 AVETNLASLENFPIGHLKTLK-----ELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSI 164 (570)
T ss_dssp CTTSCCCCSTTCSCTTCTTCC-----EEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEE
T ss_pred ccccccccCCCcccccccccc-----EEecCCCccceecChhhhcccCCCCEEeCcCCcccee
Confidence 999999954444677766665 99999999997 46666 799999999999988643
No 363
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.38 E-value=8.7e-13 Score=148.52 Aligned_cols=116 Identities=28% Similarity=0.293 Sum_probs=80.9
Q ss_pred CCCceEEEeeCCcCCCCCCCcCCCCcccEEeccCCcCcccCCCcccccCccEEEccCccCCCCCCcccCCCcccceEecc
Q 005224 1 MSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIA 80 (707)
Q Consensus 1 L~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls 80 (707)
+++|+.|+|++|+|+++++ |.+ +|++|+|++|+|+ .||. ...+|+.|+|++|+|++ +|. .+++|+.|+|+
T Consensus 99 l~~L~~L~Ls~N~l~~ip~-l~~--~L~~L~Ls~N~l~-~lp~--~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls 168 (571)
T 3cvr_A 99 PASLEYLDACDNRLSTLPE-LPA--SLKHLDVDNNQLT-MLPE--LPALLEYINADNNQLTM-LPE---LPTSLEVLSVR 168 (571)
T ss_dssp CTTCCEEECCSSCCSCCCC-CCT--TCCEEECCSSCCS-CCCC--CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECC
T ss_pred cCCCCEEEccCCCCCCcch-hhc--CCCEEECCCCcCC-CCCC--cCccccEEeCCCCccCc-CCC---cCCCcCEEECC
Confidence 4678888888888888555 554 7888888888888 4777 22278888888888884 665 46778888888
Q ss_pred CcccccCCCCCccccccCCCCccceEEccCccCCCCCCCCCCCCC-------ceeeccCCCccc
Q 005224 81 NNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSFNIPPN-------VTVRLRGNPFCL 137 (707)
Q Consensus 81 ~N~l~g~~p~~~~~l~~L~~~~L~~l~l~~N~l~~~~~~~~~~~l-------~~l~l~~N~~~~ 137 (707)
+|+|++ +|. +. ++|+.|+|++|+|+.+|. +. .+| +.|+|++|.+..
T Consensus 169 ~N~L~~-lp~-l~-------~~L~~L~Ls~N~L~~lp~-~~-~~L~~~~~~L~~L~Ls~N~l~~ 221 (571)
T 3cvr_A 169 NNQLTF-LPE-LP-------ESLEALDVSTNLLESLPA-VP-VRNHHSEETEIFFRCRENRITH 221 (571)
T ss_dssp SSCCSC-CCC-CC-------TTCCEEECCSSCCSSCCC-CC---------CCEEEECCSSCCCC
T ss_pred CCCCCC-cch-hh-------CCCCEEECcCCCCCchhh-HH-HhhhcccccceEEecCCCccee
Confidence 888874 776 43 344477777777777766 41 155 777777777764
No 364
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.38 E-value=5.4e-13 Score=141.59 Aligned_cols=128 Identities=20% Similarity=0.303 Sum_probs=86.3
Q ss_pred CCCceEEEeeCCcCCCCCCCcCCCCcccEEeccCCcCcccCCCccccc-CccEEEccCccCCCCCCcccCCCcccceEec
Q 005224 1 MSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSL-NITTIKLSNNKLTGTIPSNFSGLPRLQRLFI 79 (707)
Q Consensus 1 L~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 79 (707)
+++|+.|++++|++++..+ +..+++|++|+|++|+++ .++. +..+ +|+.|+|++|++++ + ..+..+++|+.|++
T Consensus 198 l~~L~~L~l~~n~l~~~~~-~~~~~~L~~L~l~~n~l~-~~~~-~~~l~~L~~L~l~~n~l~~-~-~~~~~l~~L~~L~l 272 (347)
T 4fmz_A 198 LTSLHYFTAYVNQITDITP-VANMTRLNSLKIGNNKIT-DLSP-LANLSQLTWLEIGTNQISD-I-NAVKDLTKLKMLNV 272 (347)
T ss_dssp CTTCCEEECCSSCCCCCGG-GGGCTTCCEEECCSSCCC-CCGG-GTTCTTCCEEECCSSCCCC-C-GGGTTCTTCCEEEC
T ss_pred CCccceeecccCCCCCCch-hhcCCcCCEEEccCCccC-CCcc-hhcCCCCCEEECCCCccCC-C-hhHhcCCCcCEEEc
Confidence 4567777888877776655 677777777888777777 5554 3333 67777777777774 3 35777777777777
Q ss_pred cCcccccCCCCCccccccCCCCccceEEccCccCCCCCCC-C-CCCCCceeeccCCCccccCC
Q 005224 80 ANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGS-F-NIPPNVTVRLRGNPFCLNTN 140 (707)
Q Consensus 80 s~N~l~g~~p~~~~~l~~L~~~~L~~l~l~~N~l~~~~~~-~-~~~~l~~l~l~~N~~~~~~~ 140 (707)
++|+++ .+| .+..+++|+ .|+|++|++++.++. + .+++|+.|++++|++.....
T Consensus 273 ~~n~l~-~~~-~~~~l~~L~-----~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~ 328 (347)
T 4fmz_A 273 GSNQIS-DIS-VLNNLSQLN-----SLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP 328 (347)
T ss_dssp CSSCCC-CCG-GGGGCTTCS-----EEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG
T ss_pred cCCccC-CCh-hhcCCCCCC-----EEECcCCcCCCcChhHhhccccCCEEEccCCccccccC
Confidence 777777 343 344444443 777777777766443 2 67777777777777765543
No 365
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.35 E-value=4.2e-13 Score=140.73 Aligned_cols=128 Identities=26% Similarity=0.246 Sum_probs=82.9
Q ss_pred CCCceEEEeeCCcCCCCCCCcCCCCcccEEeccCCcCcccCCCc-------------------ccccCccEEEccCccCC
Q 005224 1 MSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPG-------------------RLSLNITTIKLSNNKLT 61 (707)
Q Consensus 1 L~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~ip~~-------------------~~~~~L~~L~Ls~N~l~ 61 (707)
+++|+.|+|++|++++.++ |..+++|++|+|++|+|+ .+|.. .+ .+|+.|+|++|+|+
T Consensus 57 l~~L~~L~Ls~n~l~~~~~-~~~l~~L~~L~Ls~n~l~-~l~~~~~L~~L~l~~n~l~~~~~~~~-~~L~~L~l~~N~l~ 133 (317)
T 3o53_A 57 FTKLELLNLSSNVLYETLD-LESLSTLRTLDLNNNYVQ-ELLVGPSIETLHAANNNISRVSCSRG-QGKKNIYLANNKIT 133 (317)
T ss_dssp CTTCCEEECTTSCCEEEEE-ETTCTTCCEEECCSSEEE-EEEECTTCCEEECCSSCCSEEEECCC-SSCEEEECCSSCCC
T ss_pred CCcCCEEECCCCcCCcchh-hhhcCCCCEEECcCCccc-cccCCCCcCEEECCCCccCCcCcccc-CCCCEEECCCCCCC
Confidence 4688999999999987766 888888888888888888 44421 11 14566666666666
Q ss_pred CCCCcccCCCcccceEeccCcccccCCCCCcc-ccccCCCCccceEEccCccCCCCCCCCCCCCCceeeccCCCcc
Q 005224 62 GTIPSNFSGLPRLQRLFIANNSLSGSIPSSIW-QSRTLNATETFILDFQNNNLTNISGSFNIPPNVTVRLRGNPFC 136 (707)
Q Consensus 62 ~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~-~l~~L~~~~L~~l~l~~N~l~~~~~~~~~~~l~~l~l~~N~~~ 136 (707)
+..|..|..+++|++|+|++|++++..|..+. .+++| ++|+|++|+|+.++....+++|+.|++++|.+.
T Consensus 134 ~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L-----~~L~L~~N~l~~~~~~~~l~~L~~L~Ls~N~l~ 204 (317)
T 3o53_A 134 MLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTL-----EHLNLQYNFIYDVKGQVVFAKLKTLDLSSNKLA 204 (317)
T ss_dssp SGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTC-----CEEECTTSCCCEEECCCCCTTCCEEECCSSCCC
T ss_pred CccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcC-----CEEECCCCcCcccccccccccCCEEECCCCcCC
Confidence 55555666666666666666666654444442 33333 366666666666655545666666666666654
No 366
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.35 E-value=7.9e-15 Score=142.85 Aligned_cols=129 Identities=23% Similarity=0.344 Sum_probs=110.1
Q ss_pred CCceEEEeeCCcCCCCCC-------CcCCCCcccEEeccCCcCcccCCCccccc-CccEEEccCccCCCCCCcccCCCcc
Q 005224 2 SKLLKLSLRNCSLQGPMP-------DLSRIPNLGYLDLSSNQLNGSIPPGRLSL-NITTIKLSNNKLTGTIPSNFSGLPR 73 (707)
Q Consensus 2 ~~L~~L~L~~N~l~~~~~-------~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~ 73 (707)
.+++.++|+.|.+++..| .|..+++|++|+|++|+|+ .+| .+..+ +|+.|+|++|+|+ .+|..+..+++
T Consensus 18 ~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~-~l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~ 94 (198)
T 1ds9_A 18 KSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIE-KIS-SLSGMENLRILSLGRNLIK-KIENLDAVADT 94 (198)
T ss_dssp TCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEES-CCC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHH
T ss_pred ccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCc-ccc-ccccCCCCCEEECCCCCcc-cccchhhcCCc
Confidence 467788899999988766 4788999999999999999 688 54444 8999999999999 78988888999
Q ss_pred cceEeccCcccccCCCCCccccccCCCCccceEEccCccCCCCCC--CC-CCCCCceeeccCCCccccCC
Q 005224 74 LQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISG--SF-NIPPNVTVRLRGNPFCLNTN 140 (707)
Q Consensus 74 L~~L~ls~N~l~g~~p~~~~~l~~L~~~~L~~l~l~~N~l~~~~~--~~-~~~~l~~l~l~~N~~~~~~~ 140 (707)
|+.|+|++|+++ .+| .+..+++|+ .|+|++|+|+.++. .+ .+++|+.|++++|++.+.|.
T Consensus 95 L~~L~L~~N~l~-~l~-~~~~l~~L~-----~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~ 157 (198)
T 1ds9_A 95 LEELWISYNQIA-SLS-GIEKLVNLR-----VLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYK 157 (198)
T ss_dssp CSEEEEEEEECC-CHH-HHHHHHHSS-----EEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHH
T ss_pred CCEEECcCCcCC-cCC-ccccCCCCC-----EEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccc
Confidence 999999999999 466 577766665 99999999998765 33 79999999999999977653
No 367
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.34 E-value=1.4e-12 Score=120.48 Aligned_cols=109 Identities=17% Similarity=0.228 Sum_probs=95.3
Q ss_pred CCCcccEEeccCCcCc-ccCCCccccc-CccEEEccCccCCCCCCcccCCCcccceEeccCcccccCCCCCccccccCCC
Q 005224 23 RIPNLGYLDLSSNQLN-GSIPPGRLSL-NITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNA 100 (707)
Q Consensus 23 ~l~~L~~L~Ls~N~l~-g~ip~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~ 100 (707)
..++|+.|+|++|.++ |.+|..+... +|+.|+|++|+|++. ..|.++++|++|+|++|++++.+|..+..+++|+
T Consensus 15 ~~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~- 91 (149)
T 2je0_A 15 TPSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLT- 91 (149)
T ss_dssp CGGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCC-
T ss_pred CCccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCC-
Confidence 4578999999999999 8999876665 899999999999965 7899999999999999999977888777776665
Q ss_pred CccceEEccCccCCCCC--CCC-CCCCCceeeccCCCcccc
Q 005224 101 TETFILDFQNNNLTNIS--GSF-NIPPNVTVRLRGNPFCLN 138 (707)
Q Consensus 101 ~~L~~l~l~~N~l~~~~--~~~-~~~~l~~l~l~~N~~~~~ 138 (707)
+|++++|++++++ ..+ .+++|+.|++++|++...
T Consensus 92 ----~L~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~ 128 (149)
T 2je0_A 92 ----HLNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNL 128 (149)
T ss_dssp ----EEECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGS
T ss_pred ----EEECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccch
Confidence 9999999999975 455 899999999999998644
No 368
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.33 E-value=5.8e-12 Score=141.83 Aligned_cols=116 Identities=22% Similarity=0.339 Sum_probs=87.4
Q ss_pred CceEEEeeCCcCCCCCCCcCCCCcccEEeccCCcCcccCCCcccccCccEEEccCccCCCCCCcccCCCcccceEeccCc
Q 005224 3 KLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANN 82 (707)
Q Consensus 3 ~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N 82 (707)
+|+.|+|++|+|+++++.+. ++|++|+|++|+|+ .|| ... .+|+.|+|++|+|++ +|. |.+ +|+.|+|++|
T Consensus 60 ~L~~L~Ls~n~L~~lp~~l~--~~L~~L~Ls~N~l~-~ip-~~l-~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N 130 (571)
T 3cvr_A 60 QFSELQLNRLNLSSLPDNLP--PQITVLEITQNALI-SLP-ELP-ASLEYLDACDNRLST-LPE-LPA--SLKHLDVDNN 130 (571)
T ss_dssp TCSEEECCSSCCSCCCSCCC--TTCSEEECCSSCCS-CCC-CCC-TTCCEEECCSSCCSC-CCC-CCT--TCCEEECCSS
T ss_pred CccEEEeCCCCCCccCHhHc--CCCCEEECcCCCCc-ccc-ccc-CCCCEEEccCCCCCC-cch-hhc--CCCEEECCCC
Confidence 68889999999888665553 78888888888888 888 332 278888888888885 777 665 8888888888
Q ss_pred ccccCCCCCccccccCCCCccceEEccCccCCCCCCCCCCCCCceeeccCCCcccc
Q 005224 83 SLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSFNIPPNVTVRLRGNPFCLN 138 (707)
Q Consensus 83 ~l~g~~p~~~~~l~~L~~~~L~~l~l~~N~l~~~~~~~~~~~l~~l~l~~N~~~~~ 138 (707)
+|++ +|. .++ +|+.|+|++|+|+++|. .+++|+.|+|++|.+...
T Consensus 131 ~l~~-lp~---~l~-----~L~~L~Ls~N~l~~lp~--~l~~L~~L~Ls~N~L~~l 175 (571)
T 3cvr_A 131 QLTM-LPE---LPA-----LLEYINADNNQLTMLPE--LPTSLEVLSVRNNQLTFL 175 (571)
T ss_dssp CCSC-CCC---CCT-----TCCEEECCSSCCSCCCC--CCTTCCEEECCSSCCSCC
T ss_pred cCCC-CCC---cCc-----cccEEeCCCCccCcCCC--cCCCcCEEECCCCCCCCc
Confidence 8884 776 233 44478888888887766 466777888888877653
No 369
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.31 E-value=3.5e-12 Score=141.20 Aligned_cols=127 Identities=28% Similarity=0.362 Sum_probs=95.4
Q ss_pred CCCceEEEeeCCcCCCCCCCcCCCCcccEEeccCCcCcccCCCccccc-CccEEEccCccCCCCCCcccCCCcccceEec
Q 005224 1 MSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSL-NITTIKLSNNKLTGTIPSNFSGLPRLQRLFI 79 (707)
Q Consensus 1 L~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 79 (707)
+++|+.|+|++|++++.++ +..+++|++|+|++|.++ .+|. +..+ +|+.|+|++|++++..| +..+++|+.|+|
T Consensus 242 l~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~l~~n~l~-~~~~-~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L 316 (466)
T 1o6v_A 242 LTNLTDLDLANNQISNLAP-LSGLTKLTELKLGANQIS-NISP-LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTL 316 (466)
T ss_dssp CTTCSEEECCSSCCCCCGG-GTTCTTCSEEECCSSCCC-CCGG-GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEEC
T ss_pred CCCCCEEECCCCccccchh-hhcCCCCCEEECCCCccC-cccc-ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEEC
Confidence 4678899999999888766 788888899999999888 5554 3333 78888888888885443 778888888888
Q ss_pred cCcccccCCCCCccccccCCCCccceEEccCccCCCCCCCCCCCCCceeeccCCCccccC
Q 005224 80 ANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSFNIPPNVTVRLRGNPFCLNT 139 (707)
Q Consensus 80 s~N~l~g~~p~~~~~l~~L~~~~L~~l~l~~N~l~~~~~~~~~~~l~~l~l~~N~~~~~~ 139 (707)
++|++++..| +..+++|+ .|++++|++++++....+++|+.|++++|++....
T Consensus 317 ~~n~l~~~~~--~~~l~~L~-----~L~l~~n~l~~~~~l~~l~~L~~L~l~~n~l~~~~ 369 (466)
T 1o6v_A 317 YFNNISDISP--VSSLTKLQ-----RLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLT 369 (466)
T ss_dssp CSSCCSCCGG--GGGCTTCC-----EEECCSSCCCCCGGGTTCTTCCEEECCSSCCCBCG
T ss_pred cCCcCCCchh--hccCccCC-----EeECCCCccCCchhhccCCCCCEEeCCCCccCccc
Confidence 8888886554 55554444 78888888887754447778888888888775543
No 370
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.31 E-value=2.8e-13 Score=153.17 Aligned_cols=119 Identities=24% Similarity=0.307 Sum_probs=99.1
Q ss_pred EEEeeCCcCCCCCCCcCCCCcccEEeccCCcCcccCCCccccc-CccEEEccCccCCCCCCcccCCCcccceEeccCccc
Q 005224 6 KLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSL-NITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSL 84 (707)
Q Consensus 6 ~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l 84 (707)
.+++++|.|+.+++ ..|+.|+|++|+|+ .+|. +..+ +|+.|+|++|+|+ .+|..|+++++|+.|+|++|+|
T Consensus 427 ~l~l~~n~i~~l~~-----~~L~~L~Ls~n~l~-~lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l 498 (567)
T 1dce_A 427 SKFLLENSVLKMEY-----ADVRVLHLAHKDLT-VLCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNAL 498 (567)
T ss_dssp HHHHHHHHHHHHHH-----TTCSEEECTTSCCS-SCCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCC
T ss_pred hhhhhcccccccCc-----cCceEEEecCCCCC-CCcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCC
Confidence 33444555554433 25899999999999 7887 5555 8999999999999 8999999999999999999999
Q ss_pred ccCCCCCccccccCCCCccceEEccCccCCCC--CCCC-CCCCCceeeccCCCccccC
Q 005224 85 SGSIPSSIWQSRTLNATETFILDFQNNNLTNI--SGSF-NIPPNVTVRLRGNPFCLNT 139 (707)
Q Consensus 85 ~g~~p~~~~~l~~L~~~~L~~l~l~~N~l~~~--~~~~-~~~~l~~l~l~~N~~~~~~ 139 (707)
++ +| .+..+++|+ .|+|++|+|+++ |..+ .+++|+.|+|++|+++..+
T Consensus 499 ~~-lp-~l~~l~~L~-----~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~ 549 (567)
T 1dce_A 499 EN-VD-GVANLPRLQ-----ELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEE 549 (567)
T ss_dssp CC-CG-GGTTCSSCC-----EEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSS
T ss_pred CC-Cc-ccCCCCCCc-----EEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCc
Confidence 95 78 787766665 999999999999 5666 8999999999999987553
No 371
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.31 E-value=4.5e-12 Score=140.33 Aligned_cols=126 Identities=28% Similarity=0.383 Sum_probs=105.7
Q ss_pred CCCceEEEeeCCcCCCCCCCcCCCCcccEEeccCCcCcccCCCccccc-CccEEEccCccCCCCCCcccCCCcccceEec
Q 005224 1 MSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSL-NITTIKLSNNKLTGTIPSNFSGLPRLQRLFI 79 (707)
Q Consensus 1 L~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 79 (707)
+++|+.|+|++|+++++ +.+..+++|++|+|++|.++ .++. +..+ +|+.|+|++|++++..+ +..+++|+.|+|
T Consensus 220 l~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~l~~n~l~-~~~~-~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L 294 (466)
T 1o6v_A 220 LTNLDELSLNGNQLKDI-GTLASLTNLTDLDLANNQIS-NLAP-LSGLTKLTELKLGANQISNISP--LAGLTALTNLEL 294 (466)
T ss_dssp CTTCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCC-CCGG-GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEEC
T ss_pred cCCCCEEECCCCCcccc-hhhhcCCCCCEEECCCCccc-cchh-hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEc
Confidence 57899999999999975 56889999999999999999 4544 3333 89999999999996444 899999999999
Q ss_pred cCcccccCCCCCccccccCCCCccceEEccCccCCCCCCCCCCCCCceeeccCCCcccc
Q 005224 80 ANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSFNIPPNVTVRLRGNPFCLN 138 (707)
Q Consensus 80 s~N~l~g~~p~~~~~l~~L~~~~L~~l~l~~N~l~~~~~~~~~~~l~~l~l~~N~~~~~ 138 (707)
++|++++..| +..+++| +.|+|++|+++++++...+++|+.|++++|++...
T Consensus 295 ~~n~l~~~~~--~~~l~~L-----~~L~L~~n~l~~~~~~~~l~~L~~L~l~~n~l~~~ 346 (466)
T 1o6v_A 295 NENQLEDISP--ISNLKNL-----TYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDV 346 (466)
T ss_dssp CSSCCSCCGG--GGGCTTC-----SEEECCSSCCSCCGGGGGCTTCCEEECCSSCCCCC
T ss_pred CCCcccCchh--hcCCCCC-----CEEECcCCcCCCchhhccCccCCEeECCCCccCCc
Confidence 9999995433 6665555 49999999999987755899999999999998765
No 372
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.31 E-value=2.7e-12 Score=122.29 Aligned_cols=112 Identities=21% Similarity=0.277 Sum_probs=94.4
Q ss_pred CCcCCCCcccEEeccCCcCcccCCCccccc-CccEEEccCccCCCCCCcccCCCcccceEeccCcccccCCCCCc-cccc
Q 005224 19 PDLSRIPNLGYLDLSSNQLNGSIPPGRLSL-NITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSI-WQSR 96 (707)
Q Consensus 19 ~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~-~~l~ 96 (707)
+.+..+.+|+.|+|++|+|+ .+|...... +|+.|+|++|+|++. ..|..+++|++|+|++|+|+ .+|..+ ..++
T Consensus 13 ~~~~~~~~L~~L~l~~n~l~-~i~~~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~-~~~~~~~~~l~ 88 (176)
T 1a9n_A 13 AQYTNAVRDRELDLRGYKIP-VIENLGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRIC-RIGEGLDQALP 88 (176)
T ss_dssp CEEECTTSCEEEECTTSCCC-SCCCGGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCC-EECSCHHHHCT
T ss_pred HhcCCcCCceEEEeeCCCCc-hhHHhhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCccc-ccCcchhhcCC
Confidence 45778899999999999999 887533334 899999999999964 68999999999999999999 555444 7766
Q ss_pred cCCCCccceEEccCccCCCCCC--CC-CCCCCceeeccCCCccccC
Q 005224 97 TLNATETFILDFQNNNLTNISG--SF-NIPPNVTVRLRGNPFCLNT 139 (707)
Q Consensus 97 ~L~~~~L~~l~l~~N~l~~~~~--~~-~~~~l~~l~l~~N~~~~~~ 139 (707)
+|+ +|+|++|+|+.++. .+ .+++|+.|++++|+++..+
T Consensus 89 ~L~-----~L~L~~N~i~~~~~~~~l~~l~~L~~L~l~~N~i~~~~ 129 (176)
T 1a9n_A 89 DLT-----ELILTNNSLVELGDLDPLASLKSLTYLCILRNPVTNKK 129 (176)
T ss_dssp TCC-----EEECCSCCCCCGGGGGGGGGCTTCCEEECCSSGGGGST
T ss_pred CCC-----EEECCCCcCCcchhhHhhhcCCCCCEEEecCCCCCCcH
Confidence 665 99999999999887 45 8999999999999987543
No 373
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.30 E-value=1e-11 Score=136.94 Aligned_cols=120 Identities=23% Similarity=0.256 Sum_probs=101.0
Q ss_pred CCCceEEEeeCCcCCCCCCCcCCCCcccEEeccCCcCcccCCCccccc-CccEEEccCccCCCCCCcccCCCcccceEec
Q 005224 1 MSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSL-NITTIKLSNNKLTGTIPSNFSGLPRLQRLFI 79 (707)
Q Consensus 1 L~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 79 (707)
|++|++|+|++|+|+++ |+++.+++|++|+|++|+|+ .+| +..+ +|++|+|++|+|++ +| |+++++|++|+|
T Consensus 41 l~~L~~L~Ls~n~l~~~-~~l~~l~~L~~L~Ls~n~l~-~~~--~~~l~~L~~L~Ls~N~l~~-~~--~~~l~~L~~L~L 113 (457)
T 3bz5_A 41 LATLTSLDCHNSSITDM-TGIEKLTGLTKLICTSNNIT-TLD--LSQNTNLTYLACDSNKLTN-LD--VTPLTKLTYLNC 113 (457)
T ss_dssp HTTCCEEECCSSCCCCC-TTGGGCTTCSEEECCSSCCS-CCC--CTTCTTCSEEECCSSCCSC-CC--CTTCTTCCEEEC
T ss_pred cCCCCEEEccCCCcccC-hhhcccCCCCEEEccCCcCC-eEc--cccCCCCCEEECcCCCCce-ee--cCCCCcCCEEEC
Confidence 46899999999999987 58999999999999999999 576 4444 89999999999996 44 899999999999
Q ss_pred cCcccccCCCCCccccccCCCCccceEEccCccCCCCCCCCCCCCCceeeccCCCcc
Q 005224 80 ANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSFNIPPNVTVRLRGNPFC 136 (707)
Q Consensus 80 s~N~l~g~~p~~~~~l~~L~~~~L~~l~l~~N~l~~~~~~~~~~~l~~l~l~~N~~~ 136 (707)
++|++++ +| +..+++|+ +|++++|+|++++ ...+++|+.|++++|...
T Consensus 114 ~~N~l~~-l~--~~~l~~L~-----~L~l~~N~l~~l~-l~~l~~L~~L~l~~n~~~ 161 (457)
T 3bz5_A 114 DTNKLTK-LD--VSQNPLLT-----YLNCARNTLTEID-VSHNTQLTELDCHLNKKI 161 (457)
T ss_dssp CSSCCSC-CC--CTTCTTCC-----EEECTTSCCSCCC-CTTCTTCCEEECTTCSCC
T ss_pred CCCcCCe-ec--CCCCCcCC-----EEECCCCccceec-cccCCcCCEEECCCCCcc
Confidence 9999995 55 66655554 9999999999974 237888999999988643
No 374
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.30 E-value=7e-12 Score=127.52 Aligned_cols=146 Identities=14% Similarity=0.079 Sum_probs=114.1
Q ss_pred HHHhcCCCccceEeeeCceEEEEEEeCCCcEEEEEEeccCChhhHHHHHHHHHHHHccC-CCcceeEEEEEEeCCeEEEE
Q 005224 371 ALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLH-HRNLVSLVGYCDEEGEQMLV 449 (707)
Q Consensus 371 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~lV 449 (707)
......|+....++.|+.+.||++... ++.+++|+...........+.+|+++++.+. +..+.++++++...+..++|
T Consensus 10 ~~~l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv 88 (263)
T 3tm0_A 10 KKLIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLL 88 (263)
T ss_dssp HHHHTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEE
T ss_pred HHHhccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEE
Confidence 334457888888898999999999864 6889999987532222346889999999984 67788999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCC------------------------------------
Q 005224 450 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEA------------------------------------ 493 (707)
Q Consensus 450 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~------------------------------------ 493 (707)
|||++|.+|.+.+.. ......++.+++++|+.||+..
T Consensus 89 ~e~i~G~~l~~~~~~-------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (263)
T 3tm0_A 89 MSEADGVLCSEEYED-------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEED 161 (263)
T ss_dssp EECCSSEEHHHHCCT-------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTT
T ss_pred EEecCCeehhhccCC-------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhcccccccccccccc
Confidence 999999999876411 1223478889999999999811
Q ss_pred --------------------CCCeEecCCCCCCEEEcCCCcEEEeeecccc
Q 005224 494 --------------------DPPVFHRDIKASNILLDHKFTAKVADFGLSR 524 (707)
Q Consensus 494 --------------------~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~ 524 (707)
.+.++|+|+++.||+++++..+.|+||+.+.
T Consensus 162 ~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 162 TPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp CSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred ccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 1348999999999999876666799999764
No 375
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.28 E-value=4.2e-14 Score=137.67 Aligned_cols=124 Identities=20% Similarity=0.246 Sum_probs=103.0
Q ss_pred CCCceEEEeeCCcCCCCCCCcCCCCcccEEeccCCcCcccCCCccccc-CccEEEccCccCCCCCCcccCCCcccceEec
Q 005224 1 MSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSL-NITTIKLSNNKLTGTIPSNFSGLPRLQRLFI 79 (707)
Q Consensus 1 L~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 79 (707)
+++|+.|+|++|+|++++ .+..+++|++|+|++|+|+ .+|..+..+ +|+.|+|++|+|++ +| .+..+++|+.|+|
T Consensus 47 l~~L~~L~ls~n~l~~l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l 122 (198)
T 1ds9_A 47 LKACKHLALSTNNIEKIS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIAS-LS-GIEKLVNLRVLYM 122 (198)
T ss_dssp TTTCSEEECSEEEESCCC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEE
T ss_pred CCCCCEEECCCCCCcccc-ccccCCCCCEEECCCCCcc-cccchhhcCCcCCEEECcCCcCCc-CC-ccccCCCCCEEEC
Confidence 578999999999999955 8999999999999999999 899866554 89999999999995 66 6899999999999
Q ss_pred cCcccccCCCC--CccccccCCCCccceEEccCccCCCCCCC-----------C-CCCCCceeeccCCCcc
Q 005224 80 ANNSLSGSIPS--SIWQSRTLNATETFILDFQNNNLTNISGS-----------F-NIPPNVTVRLRGNPFC 136 (707)
Q Consensus 80 s~N~l~g~~p~--~~~~l~~L~~~~L~~l~l~~N~l~~~~~~-----------~-~~~~l~~l~l~~N~~~ 136 (707)
++|+++ .+|. .+..+++| ++|++++|.+++.++. + .+++|+.|+ +|++.
T Consensus 123 ~~N~i~-~~~~~~~l~~l~~L-----~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~l~~L~~Ld--~~~i~ 185 (198)
T 1ds9_A 123 SNNKIT-NWGEIDKLAALDKL-----EDLLLAGNPLYNDYKENNATSEYRIEVVKRLPNLKKLD--GMPVD 185 (198)
T ss_dssp SEEECC-CHHHHHHHTTTTTC-----SEEEECSCHHHHHHHTTTTHHHHHHHHHHHCSSCSEEC--CGGGT
T ss_pred CCCcCC-chhHHHHHhcCCCC-----CEEEecCCccccccccccchHHHHHHHHHhCCCcEEEC--CcccC
Confidence 999998 4443 55555555 4999999999876432 3 678888775 77764
No 376
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.27 E-value=2.6e-11 Score=133.54 Aligned_cols=121 Identities=26% Similarity=0.322 Sum_probs=88.3
Q ss_pred CCceEEEeeCCcCCCCCCCcCCCCcccEEeccCCcCcccCCCcccccCccEEEccCccCCCCCCcccCCCcccceEeccC
Q 005224 2 SKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIAN 81 (707)
Q Consensus 2 ~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~ 81 (707)
++|++|+|++|+++++ |+|+++++|++|+|++|+++ .+|... .+|++|+|++|++++ +| .|+++++|+.|++++
T Consensus 131 ~~L~~L~L~~n~l~~l-p~~~~l~~L~~L~l~~N~l~-~lp~~~--~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~ 204 (454)
T 1jl5_A 131 PLLEYLGVSNNQLEKL-PELQNSSFLKIIDVDNNSLK-KLPDLP--PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADN 204 (454)
T ss_dssp TTCCEEECCSSCCSSC-CCCTTCTTCCEEECCSSCCS-CCCCCC--TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCS
T ss_pred CCCCEEECcCCCCCCC-cccCCCCCCCEEECCCCcCc-ccCCCc--ccccEEECcCCcCCc-Cc-cccCCCCCCEEECCC
Confidence 4677778888887774 46778888888888888888 576543 278888888888885 66 578888888888888
Q ss_pred cccccCCCCCccccccCCCCccceEEccCccCCCCCCCCCCCCCceeeccCCCccc
Q 005224 82 NSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSFNIPPNVTVRLRGNPFCL 137 (707)
Q Consensus 82 N~l~g~~p~~~~~l~~L~~~~L~~l~l~~N~l~~~~~~~~~~~l~~l~l~~N~~~~ 137 (707)
|+++ .+|... .+|+.|++++|+++.+|....+++|+.|++++|.+..
T Consensus 205 N~l~-~l~~~~--------~~L~~L~l~~n~l~~lp~~~~l~~L~~L~l~~N~l~~ 251 (454)
T 1jl5_A 205 NSLK-KLPDLP--------LSLESIVAGNNILEELPELQNLPFLTTIYADNNLLKT 251 (454)
T ss_dssp SCCS-SCCCCC--------TTCCEEECCSSCCSSCCCCTTCTTCCEEECCSSCCSS
T ss_pred CcCC-cCCCCc--------CcccEEECcCCcCCcccccCCCCCCCEEECCCCcCCc
Confidence 8887 355432 2445788888888877753377888888888887754
No 377
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.27 E-value=1e-11 Score=131.74 Aligned_cols=125 Identities=26% Similarity=0.407 Sum_probs=101.6
Q ss_pred CCCceEEEeeCCcCCCCCCCcCCCCcccEEeccCCcCcccCCCccccc-CccEEEccCccCCCCCCcccCCCcccceEec
Q 005224 1 MSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSL-NITTIKLSNNKLTGTIPSNFSGLPRLQRLFI 79 (707)
Q Consensus 1 L~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 79 (707)
+++|+.|+|++|++++..+ +..+++|+.|++++|.++ .++. +..+ +|+.|+|++|++++ ++. +..+++|++|++
T Consensus 176 l~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~l~~n~l~-~~~~-~~~~~~L~~L~l~~n~l~~-~~~-~~~l~~L~~L~l 250 (347)
T 4fmz_A 176 LTDLYSLSLNYNQIEDISP-LASLTSLHYFTAYVNQIT-DITP-VANMTRLNSLKIGNNKITD-LSP-LANLSQLTWLEI 250 (347)
T ss_dssp CTTCSEEECTTSCCCCCGG-GGGCTTCCEEECCSSCCC-CCGG-GGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEEC
T ss_pred CCCCCEEEccCCccccccc-ccCCCccceeecccCCCC-CCch-hhcCCcCCEEEccCCccCC-Ccc-hhcCCCCCEEEC
Confidence 4789999999999987666 888999999999999999 5554 3333 89999999999994 444 889999999999
Q ss_pred cCcccccCCCCCccccccCCCCccceEEccCccCCCCCCCCCCCCCceeeccCCCccc
Q 005224 80 ANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSFNIPPNVTVRLRGNPFCL 137 (707)
Q Consensus 80 s~N~l~g~~p~~~~~l~~L~~~~L~~l~l~~N~l~~~~~~~~~~~l~~l~l~~N~~~~ 137 (707)
++|.++ .++ .+..+++| +.|++++|++++++....+++|+.|++++|++..
T Consensus 251 ~~n~l~-~~~-~~~~l~~L-----~~L~l~~n~l~~~~~~~~l~~L~~L~L~~n~l~~ 301 (347)
T 4fmz_A 251 GTNQIS-DIN-AVKDLTKL-----KMLNVGSNQISDISVLNNLSQLNSLFLNNNQLGN 301 (347)
T ss_dssp CSSCCC-CCG-GGTTCTTC-----CEEECCSSCCCCCGGGGGCTTCSEEECCSSCCCG
T ss_pred CCCccC-CCh-hHhcCCCc-----CEEEccCCccCCChhhcCCCCCCEEECcCCcCCC
Confidence 999998 443 45555544 4999999999998644488999999999999854
No 378
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.25 E-value=2.3e-11 Score=138.59 Aligned_cols=117 Identities=26% Similarity=0.303 Sum_probs=67.4
Q ss_pred CCceEEEeeCCcCCCCCCC---cCCC--------------CcccEEeccCCcCcccCCCcccccCccEEEccCccCCCCC
Q 005224 2 SKLLKLSLRNCSLQGPMPD---LSRI--------------PNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTI 64 (707)
Q Consensus 2 ~~L~~L~L~~N~l~~~~~~---~~~l--------------~~L~~L~Ls~N~l~g~ip~~~~~~~L~~L~Ls~N~l~~~~ 64 (707)
++|++|+|++|+|++++.. +..| ++|+.|+|++|+|+ .+|... .+|+.|+|++|+|+ .+
T Consensus 141 ~~L~~L~Ls~N~l~~l~~~~~~L~~L~L~~N~l~~l~~~~~~L~~L~Ls~N~l~-~l~~~~--~~L~~L~L~~N~l~-~l 216 (622)
T 3g06_A 141 PGLQELSVSDNQLASLPALPSELCKLWAYNNQLTSLPMLPSGLQELSVSDNQLA-SLPTLP--SELYKLWAYNNRLT-SL 216 (622)
T ss_dssp TTCCEEECCSSCCSCCCCCCTTCCEEECCSSCCSCCCCCCTTCCEEECCSSCCS-CCCCCC--TTCCEEECCSSCCS-SC
T ss_pred CCCCEEECcCCcCCCcCCccCCCCEEECCCCCCCCCcccCCCCcEEECCCCCCC-CCCCcc--chhhEEECcCCccc-cc
Confidence 5677777777777765542 3333 77888888888888 666532 25666666666666 44
Q ss_pred CcccCCCcccceEeccCcccccCCCCCccccccCCCCccceEEccCccCCCCCCCCCCCCCceeeccCCCcc
Q 005224 65 PSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSFNIPPNVTVRLRGNPFC 136 (707)
Q Consensus 65 p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~~~L~~l~l~~N~l~~~~~~~~~~~l~~l~l~~N~~~ 136 (707)
|.. +++|+.|+|++|+|+ .+|..+ ++|+.|+|++|+|+.+|. .+++|+.|+|++|.+.
T Consensus 217 ~~~---~~~L~~L~Ls~N~L~-~lp~~l--------~~L~~L~Ls~N~L~~lp~--~~~~L~~L~Ls~N~L~ 274 (622)
T 3g06_A 217 PAL---PSGLKELIVSGNRLT-SLPVLP--------SELKELMVSGNRLTSLPM--LPSGLLSLSVYRNQLT 274 (622)
T ss_dssp CCC---CTTCCEEECCSSCCS-CCCCCC--------TTCCEEECCSSCCSCCCC--CCTTCCEEECCSSCCC
T ss_pred CCC---CCCCCEEEccCCccC-cCCCCC--------CcCcEEECCCCCCCcCCc--ccccCcEEeCCCCCCC
Confidence 432 355666666666666 345211 223355555555555544 3445555555555554
No 379
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.23 E-value=4.4e-11 Score=131.88 Aligned_cols=124 Identities=27% Similarity=0.274 Sum_probs=82.4
Q ss_pred CCCceEEEeeCCcCCCCCCCcCCCCcccEEeccCCcCcccCCCccccc-CccEEEccCccCCCCCCcccCCCcccceEec
Q 005224 1 MSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSL-NITTIKLSNNKLTGTIPSNFSGLPRLQRLFI 79 (707)
Q Consensus 1 L~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 79 (707)
|++|++|+|++|+|++++ ++.+++|++|+|++|+|+ .+| +..+ +|++|+|++|+|++ +| ++++++|++|++
T Consensus 63 l~~L~~L~Ls~n~l~~~~--~~~l~~L~~L~Ls~N~l~-~~~--~~~l~~L~~L~L~~N~l~~-l~--~~~l~~L~~L~l 134 (457)
T 3bz5_A 63 LTGLTKLICTSNNITTLD--LSQNTNLTYLACDSNKLT-NLD--VTPLTKLTYLNCDTNKLTK-LD--VSQNPLLTYLNC 134 (457)
T ss_dssp CTTCSEEECCSSCCSCCC--CTTCTTCSEEECCSSCCS-CCC--CTTCTTCCEEECCSSCCSC-CC--CTTCTTCCEEEC
T ss_pred cCCCCEEEccCCcCCeEc--cccCCCCCEEECcCCCCc-eee--cCCCCcCCEEECCCCcCCe-ec--CCCCCcCCEEEC
Confidence 467888888888888763 778888888888888888 455 3334 78888888888885 44 778888888888
Q ss_pred cCcccccCCCCCccccccCC-----------------CCccceEEccCccCCCCCCCCCCCCCceeeccCCCcc
Q 005224 80 ANNSLSGSIPSSIWQSRTLN-----------------ATETFILDFQNNNLTNISGSFNIPPNVTVRLRGNPFC 136 (707)
Q Consensus 80 s~N~l~g~~p~~~~~l~~L~-----------------~~~L~~l~l~~N~l~~~~~~~~~~~l~~l~l~~N~~~ 136 (707)
++|+|++ +| +..+++|+ +++|+.|++++|+|++++ ...+++|+.|++++|.+.
T Consensus 135 ~~N~l~~-l~--l~~l~~L~~L~l~~n~~~~~~~~~~l~~L~~L~ls~n~l~~l~-l~~l~~L~~L~l~~N~l~ 204 (457)
T 3bz5_A 135 ARNTLTE-ID--VSHNTQLTELDCHLNKKITKLDVTPQTQLTTLDCSFNKITELD-VSQNKLLNRLNCDTNNIT 204 (457)
T ss_dssp TTSCCSC-CC--CTTCTTCCEEECTTCSCCCCCCCTTCTTCCEEECCSSCCCCCC-CTTCTTCCEEECCSSCCS
T ss_pred CCCccce-ec--cccCCcCCEEECCCCCcccccccccCCcCCEEECCCCccceec-cccCCCCCEEECcCCcCC
Confidence 8888875 43 43333332 233445555555555554 124555555555555543
No 380
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.23 E-value=5.1e-11 Score=135.71 Aligned_cols=107 Identities=25% Similarity=0.309 Sum_probs=61.0
Q ss_pred CCCceEEEeeCCcCCCCCCCcCCCCcccEEeccCCcCcccCCCcccccCccEEEccCccCCCCCCcccCCCcccceEecc
Q 005224 1 MSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIA 80 (707)
Q Consensus 1 L~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls 80 (707)
+++|++|+|++|+|+++++ .+++|++|+|++|+|+ .+|. ...+|+.|+|++|+|+ .+|.. +++|++|+|+
T Consensus 80 l~~L~~L~Ls~N~l~~lp~---~l~~L~~L~Ls~N~l~-~l~~--~l~~L~~L~L~~N~l~-~lp~~---l~~L~~L~Ls 149 (622)
T 3g06_A 80 PPELRTLEVSGNQLTSLPV---LPPGLLELSIFSNPLT-HLPA--LPSGLCKLWIFGNQLT-SLPVL---PPGLQELSVS 149 (622)
T ss_dssp CTTCCEEEECSCCCSCCCC---CCTTCCEEEECSCCCC-CCCC--CCTTCCEEECCSSCCS-CCCCC---CTTCCEEECC
T ss_pred CCCCCEEEcCCCcCCcCCC---CCCCCCEEECcCCcCC-CCCC--CCCCcCEEECCCCCCC-cCCCC---CCCCCEEECc
Confidence 3567777777777776544 5566777777777777 5665 1125666666666666 34543 3566666666
Q ss_pred CcccccCCCCCccccccCC------------CCccceEEccCccCCCCCC
Q 005224 81 NNSLSGSIPSSIWQSRTLN------------ATETFILDFQNNNLTNISG 118 (707)
Q Consensus 81 ~N~l~g~~p~~~~~l~~L~------------~~~L~~l~l~~N~l~~~~~ 118 (707)
+|+|+ .+|..+.++..|. .++|+.|+|++|+|+++|.
T Consensus 150 ~N~l~-~l~~~~~~L~~L~L~~N~l~~l~~~~~~L~~L~Ls~N~l~~l~~ 198 (622)
T 3g06_A 150 DNQLA-SLPALPSELCKLWAYNNQLTSLPMLPSGLQELSVSDNQLASLPT 198 (622)
T ss_dssp SSCCS-CCCCCCTTCCEEECCSSCCSCCCCCCTTCCEEECCSSCCSCCCC
T ss_pred CCcCC-CcCCccCCCCEEECCCCCCCCCcccCCCCcEEECCCCCCCCCCC
Confidence 66665 3444333333321 1345566666666665543
No 381
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.22 E-value=1.8e-11 Score=129.88 Aligned_cols=103 Identities=22% Similarity=0.208 Sum_probs=87.2
Q ss_pred EEEeeCC-cCCCCCCCcCCCCcccEEeccC-CcCcccCCCc-cccc-CccEEEccCccCCCCCCcccCCCcccceEeccC
Q 005224 6 KLSLRNC-SLQGPMPDLSRIPNLGYLDLSS-NQLNGSIPPG-RLSL-NITTIKLSNNKLTGTIPSNFSGLPRLQRLFIAN 81 (707)
Q Consensus 6 ~L~L~~N-~l~~~~~~~~~l~~L~~L~Ls~-N~l~g~ip~~-~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~ 81 (707)
.++++++ +|+++++ |..+++|++|+|++ |+|+ .+|+. +..+ +|+.|+|++|+|++..|..|.+|++|+.|+|++
T Consensus 12 ~v~~~~~n~l~~ip~-l~~~~~L~~L~l~~~n~l~-~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~ 89 (347)
T 2ifg_A 12 GLRCTRDGALDSLHH-LPGAENLTELYIENQQHLQ-HLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSF 89 (347)
T ss_dssp CEECCSSCCCTTTTT-SCSCSCCSEEECCSCSSCC-EECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCS
T ss_pred EEEcCCCCCCCccCC-CCCCCCeeEEEccCCCCCC-CcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCC
Confidence 5789998 9999888 99999999999996 9999 67754 4445 899999999999999999999999999999999
Q ss_pred cccccCCCCCccccccCCCCccceEEccCccCCCC
Q 005224 82 NSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNI 116 (707)
Q Consensus 82 N~l~g~~p~~~~~l~~L~~~~L~~l~l~~N~l~~~ 116 (707)
|+|+ .+|..+.... .|+.|+|++|.|...
T Consensus 90 N~l~-~~~~~~~~~~-----~L~~l~l~~N~~~c~ 118 (347)
T 2ifg_A 90 NALE-SLSWKTVQGL-----SLQELVLSGNPLHCS 118 (347)
T ss_dssp SCCS-CCCSTTTCSC-----CCCEEECCSSCCCCC
T ss_pred Cccc-eeCHHHcccC-----CceEEEeeCCCccCC
Confidence 9999 5555443322 255999999999864
No 382
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.22 E-value=2e-11 Score=129.84 Aligned_cols=130 Identities=22% Similarity=0.234 Sum_probs=97.8
Q ss_pred CCceEEEeeCCcCCCCCC-CcCCCCcccEEeccCCcCcccCCCccccc--Cc-cEEEccCccCCCCCCcccCCCcccceE
Q 005224 2 SKLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQLNGSIPPGRLSL--NI-TTIKLSNNKLTGTIPSNFSGLPRLQRL 77 (707)
Q Consensus 2 ~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~--~L-~~L~Ls~N~l~~~~p~~~~~l~~L~~L 77 (707)
++|++|+|++|+|+.+++ .|.++++|++|+|++|++.+.+|.+.+.. +| +.+.+++|+|+...|..|.++++|++|
T Consensus 30 ~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L 109 (350)
T 4ay9_X 30 RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYL 109 (350)
T ss_dssp TTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEE
T ss_pred CCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCcccccCchhhhhccccccc
Confidence 468999999999998887 68999999999999999876788876543 54 457778899997778889999999999
Q ss_pred eccCcccccCCCCCccccccCCCCccceEEccC-ccCCCCCCCC--CC-CCCceeeccCCCcc
Q 005224 78 FIANNSLSGSIPSSIWQSRTLNATETFILDFQN-NNLTNISGSF--NI-PPNVTVRLRGNPFC 136 (707)
Q Consensus 78 ~ls~N~l~g~~p~~~~~l~~L~~~~L~~l~l~~-N~l~~~~~~~--~~-~~l~~l~l~~N~~~ 136 (707)
++++|+|++..+..+... .++..|++.+ |+++.++... .+ ..++.|++++|.+.
T Consensus 110 ~l~~n~l~~~~~~~~~~~-----~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~ 167 (350)
T 4ay9_X 110 LISNTGIKHLPDVHKIHS-----LQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQ 167 (350)
T ss_dssp EEEEECCSSCCCCTTCCB-----SSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCC
T ss_pred cccccccccCCchhhccc-----chhhhhhhccccccccccccchhhcchhhhhhcccccccc
Confidence 999999984444344332 2344777754 6777776543 33 34667888888875
No 383
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.18 E-value=1.1e-10 Score=128.43 Aligned_cols=118 Identities=21% Similarity=0.180 Sum_probs=74.7
Q ss_pred CceEEEeeCCcCCCCCCCcCCCCcccEEeccCCcCcccCCCcccccCccEEEccCccCCCCCCcccCCCcccceEeccCc
Q 005224 3 KLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANN 82 (707)
Q Consensus 3 ~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N 82 (707)
+|+.|+|++|+++++++. +++|++|+|++|+++ .+|... .+|++|+|++|++++ +| +|+++++|++|++++|
T Consensus 92 ~L~~L~l~~n~l~~lp~~---~~~L~~L~l~~n~l~-~l~~~~--~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N 163 (454)
T 1jl5_A 92 HLESLVASCNSLTELPEL---PQSLKSLLVDNNNLK-ALSDLP--PLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNN 163 (454)
T ss_dssp TCSEEECCSSCCSSCCCC---CTTCCEEECCSSCCS-CCCSCC--TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSS
T ss_pred CCCEEEccCCcCCccccc---cCCCcEEECCCCccC-cccCCC--CCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCC
Confidence 455666666666653322 256666666666666 454321 267777777777774 66 4777777777777777
Q ss_pred ccccCCCCCccccccCCCCccceEEccCccCCCCCCCCCCCCCceeeccCCCccc
Q 005224 83 SLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSFNIPPNVTVRLRGNPFCL 137 (707)
Q Consensus 83 ~l~g~~p~~~~~l~~L~~~~L~~l~l~~N~l~~~~~~~~~~~l~~l~l~~N~~~~ 137 (707)
+++ .+|..+. +|++|++++|+++++|....+++|+.|++++|.+..
T Consensus 164 ~l~-~lp~~~~--------~L~~L~L~~n~l~~l~~~~~l~~L~~L~l~~N~l~~ 209 (454)
T 1jl5_A 164 SLK-KLPDLPP--------SLEFIAAGNNQLEELPELQNLPFLTAIYADNNSLKK 209 (454)
T ss_dssp CCS-CCCCCCT--------TCCEEECCSSCCSSCCCCTTCTTCCEEECCSSCCSS
T ss_pred cCc-ccCCCcc--------cccEEECcCCcCCcCccccCCCCCCEEECCCCcCCc
Confidence 777 3665432 344777777777777643367777777777777653
No 384
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.12 E-value=6.3e-11 Score=119.95 Aligned_cols=136 Identities=21% Similarity=0.159 Sum_probs=100.1
Q ss_pred CCCccceEeeeCceEEEEEEeCCCcEEEEEEeccCChhhHHHHHHHHHHHHccCCCc--ceeEEEEEEeCCeEEEEEecC
Q 005224 376 NFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRN--LVSLVGYCDEEGEQMLVYEFM 453 (707)
Q Consensus 376 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~n--Iv~l~~~~~~~~~~~lV~E~~ 453 (707)
.+......+.|..+.||++...+|+.+++|+.... ....+.+|+.+++.+.+.+ +.+++++....+..++||||+
T Consensus 21 ~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i 97 (264)
T 1nd4_A 21 GYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEV 97 (264)
T ss_dssp TCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECC
T ss_pred CCceEecccCCCCceEEEEecCCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEec
Confidence 34333333455669999998777888999997653 2245778999999986544 556888888888899999999
Q ss_pred CCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCC----------------------------------------
Q 005224 454 SNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEA---------------------------------------- 493 (707)
Q Consensus 454 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~---------------------------------------- 493 (707)
+|.+|. ... .+ ...++.++++.|..||+..
T Consensus 98 ~G~~l~--~~~-----~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (264)
T 1nd4_A 98 PGQDLL--SSH-----LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAP 167 (264)
T ss_dssp SSEETT--TSC-----CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCH
T ss_pred CCcccC--cCc-----CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccH
Confidence 998874 211 11 2356777888888888643
Q ss_pred ---------------CCCeEecCCCCCCEEEcCCCcEEEeeecccc
Q 005224 494 ---------------DPPVFHRDIKASNILLDHKFTAKVADFGLSR 524 (707)
Q Consensus 494 ---------------~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~ 524 (707)
...++|+|++|.||+++++..+.|+|||.+.
T Consensus 168 ~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~ 213 (264)
T 1nd4_A 168 AELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG 213 (264)
T ss_dssp HHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred HHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcc
Confidence 1229999999999999887667799999875
No 385
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.12 E-value=3.4e-12 Score=137.71 Aligned_cols=130 Identities=18% Similarity=0.284 Sum_probs=67.1
Q ss_pred CCceEEEeeCCcCC-CCCC----CcCCCCcccEEeccCCcCc--c---cCCCccccc-CccEEEccCccCC----CCCCc
Q 005224 2 SKLLKLSLRNCSLQ-GPMP----DLSRIPNLGYLDLSSNQLN--G---SIPPGRLSL-NITTIKLSNNKLT----GTIPS 66 (707)
Q Consensus 2 ~~L~~L~L~~N~l~-~~~~----~~~~l~~L~~L~Ls~N~l~--g---~ip~~~~~~-~L~~L~Ls~N~l~----~~~p~ 66 (707)
++|++|+|++|+|+ +..+ .|..+++|++|+|++|+|+ | .+|..+... +|+.|+|++|+|+ +.+|.
T Consensus 159 ~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~ 238 (386)
T 2ca6_A 159 PPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAI 238 (386)
T ss_dssp CCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHH
T ss_pred CCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHH
Confidence 45555666666554 2222 2445556666666666655 2 122233332 5666666666664 34555
Q ss_pred ccCCCcccceEeccCcccccC----CCCCccc--cccCCCCccceEEccCccCCC-----CCCCC--CCCCCceeeccCC
Q 005224 67 NFSGLPRLQRLFIANNSLSGS----IPSSIWQ--SRTLNATETFILDFQNNNLTN-----ISGSF--NIPPNVTVRLRGN 133 (707)
Q Consensus 67 ~~~~l~~L~~L~ls~N~l~g~----~p~~~~~--l~~L~~~~L~~l~l~~N~l~~-----~~~~~--~~~~l~~l~l~~N 133 (707)
.+..+++|+.|+|++|.|++. +|..+.. ++ +|+.|+|++|.|+. ++..+ .+++|+.|++++|
T Consensus 239 ~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~-----~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N 313 (386)
T 2ca6_A 239 ALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENI-----GLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGN 313 (386)
T ss_dssp HGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSC-----CCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTS
T ss_pred HHccCCCcCEEECCCCCCchhhHHHHHHHHhhccCC-----CeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCC
Confidence 556666666666666666533 2333311 22 23366666666665 44433 3566666666666
Q ss_pred Ccc
Q 005224 134 PFC 136 (707)
Q Consensus 134 ~~~ 136 (707)
++.
T Consensus 314 ~l~ 316 (386)
T 2ca6_A 314 RFS 316 (386)
T ss_dssp BSC
T ss_pred cCC
Confidence 654
No 386
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.10 E-value=6.5e-12 Score=132.55 Aligned_cols=128 Identities=13% Similarity=0.188 Sum_probs=103.1
Q ss_pred CCceEEEeeCCcCCCCCCCcCCCCcccEEeccCCcCccc-CCCccccc-CccEEEccCccCCCCCCcccCCCcccceEec
Q 005224 2 SKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGS-IPPGRLSL-NITTIKLSNNKLTGTIPSNFSGLPRLQRLFI 79 (707)
Q Consensus 2 ~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~-ip~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 79 (707)
++|+.|+|++|.+++.++.+..+++|++|+|++|.+++. +|..+... +|++|+|++|++++..|..|+.+++|++|+|
T Consensus 70 ~~l~~L~l~~n~l~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L 149 (336)
T 2ast_B 70 QGVIAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNL 149 (336)
T ss_dssp TTCSEEECTTCEECSCCCSCCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEEC
T ss_pred ccceEEEcCCccccccchhhccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEEC
Confidence 578899999999998888778899999999999998855 66555544 8999999999999888888999999999999
Q ss_pred cCc-ccccC-CCCCccccccCCCCccceEEccCc-cCCC--CCCCC-CCC-CCceeeccCCC
Q 005224 80 ANN-SLSGS-IPSSIWQSRTLNATETFILDFQNN-NLTN--ISGSF-NIP-PNVTVRLRGNP 134 (707)
Q Consensus 80 s~N-~l~g~-~p~~~~~l~~L~~~~L~~l~l~~N-~l~~--~~~~~-~~~-~l~~l~l~~N~ 134 (707)
++| .+++. +|..+..+++|+ .|+|++| +++. ++..+ .++ +|+.|++++|.
T Consensus 150 ~~~~~l~~~~l~~~~~~~~~L~-----~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~ 206 (336)
T 2ast_B 150 SGCSGFSEFALQTLLSSCSRLD-----ELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYR 206 (336)
T ss_dssp TTCBSCCHHHHHHHHHHCTTCC-----EEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCG
T ss_pred CCCCCCCHHHHHHHHhcCCCCC-----EEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCc
Confidence 999 67752 566666666555 8999999 8885 33333 678 88999998885
No 387
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.06 E-value=7.3e-12 Score=135.03 Aligned_cols=131 Identities=19% Similarity=0.261 Sum_probs=91.0
Q ss_pred CCCceEEEeeCCcC---CCCCC-Cc-------CCCCcccEEeccCCcCcc----cCCCccccc-CccEEEccCccCCCCC
Q 005224 1 MSKLLKLSLRNCSL---QGPMP-DL-------SRIPNLGYLDLSSNQLNG----SIPPGRLSL-NITTIKLSNNKLTGTI 64 (707)
Q Consensus 1 L~~L~~L~L~~N~l---~~~~~-~~-------~~l~~L~~L~Ls~N~l~g----~ip~~~~~~-~L~~L~Ls~N~l~~~~ 64 (707)
+++|+.|+|++|.+ ++.+| .+ ..+++|++|+|++|.|++ .+|..+... +|+.|+|++|+|++..
T Consensus 59 ~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~ 138 (386)
T 2ca6_A 59 KKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQA 138 (386)
T ss_dssp CTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHH
T ss_pred CCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHH
Confidence 46788999988644 44444 33 678899999999999885 355555444 7899999999887544
Q ss_pred CcccCC----C---------cccceEeccCcccc-cCCC---CCccccccCCCCccceEEccCccCC--C----CCCCC-
Q 005224 65 PSNFSG----L---------PRLQRLFIANNSLS-GSIP---SSIWQSRTLNATETFILDFQNNNLT--N----ISGSF- 120 (707)
Q Consensus 65 p~~~~~----l---------~~L~~L~ls~N~l~-g~~p---~~~~~l~~L~~~~L~~l~l~~N~l~--~----~~~~~- 120 (707)
+..+.. + ++|++|+|++|+++ +.+| ..+..+++| +.|+|++|+|+ + ++..+
T Consensus 139 ~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L-----~~L~L~~n~l~~~g~~~l~~~~l~ 213 (386)
T 2ca6_A 139 GAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLL-----HTVKMVQNGIRPEGIEHLLLEGLA 213 (386)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTC-----CEEECCSSCCCHHHHHHHHHTTGG
T ss_pred HHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCc-----CEEECcCCCCCHhHHHHHHHHHhh
Confidence 444433 3 78888999998887 4445 344444444 48888888888 2 23234
Q ss_pred CCCCCceeeccCCCcc
Q 005224 121 NIPPNVTVRLRGNPFC 136 (707)
Q Consensus 121 ~~~~l~~l~l~~N~~~ 136 (707)
.+++|+.|+|++|.+.
T Consensus 214 ~~~~L~~L~Ls~n~l~ 229 (386)
T 2ca6_A 214 YCQELKVLDLQDNTFT 229 (386)
T ss_dssp GCTTCCEEECCSSCCH
T ss_pred cCCCccEEECcCCCCC
Confidence 6788888888888874
No 388
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.03 E-value=2.3e-11 Score=129.98 Aligned_cols=133 Identities=23% Similarity=0.250 Sum_probs=69.5
Q ss_pred CceEEEeeCCcCCCCCC-----CcCCCC-cccEEeccCCcCcccCCCcccc------cCccEEEccCccCCCCCCcccCC
Q 005224 3 KLLKLSLRNCSLQGPMP-----DLSRIP-NLGYLDLSSNQLNGSIPPGRLS------LNITTIKLSNNKLTGTIPSNFSG 70 (707)
Q Consensus 3 ~L~~L~L~~N~l~~~~~-----~~~~l~-~L~~L~Ls~N~l~g~ip~~~~~------~~L~~L~Ls~N~l~~~~p~~~~~ 70 (707)
+|++|+|++|+|++..+ .|..++ +|++|+|++|+|++..+..+.. .+|++|+|++|+|++..+..+..
T Consensus 23 ~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~ 102 (362)
T 3goz_A 23 GVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELVK 102 (362)
T ss_dssp TCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHH
T ss_pred CceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHHHH
Confidence 36666666666666553 245555 6666666666666333333222 25666666666666555543333
Q ss_pred C-----cccceEeccCcccccCCCCCcccc-ccCCCCccceEEccCccCCCCC-----CCC-CCC-CCceeeccCCCcc
Q 005224 71 L-----PRLQRLFIANNSLSGSIPSSIWQS-RTLNATETFILDFQNNNLTNIS-----GSF-NIP-PNVTVRLRGNPFC 136 (707)
Q Consensus 71 l-----~~L~~L~ls~N~l~g~~p~~~~~l-~~L~~~~L~~l~l~~N~l~~~~-----~~~-~~~-~l~~l~l~~N~~~ 136 (707)
. ++|++|+|++|+|++..+..+... ..+ ..+|++|+|++|+|+... ..+ ..+ +|+.|+|++|.+.
T Consensus 103 ~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~-~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~ 180 (362)
T 3goz_A 103 TLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNL-PASITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLA 180 (362)
T ss_dssp HHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTS-CTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGG
T ss_pred HHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhC-CCceeEEEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCCc
Confidence 2 566666666666664433333221 100 023446666666666321 111 233 5666666666653
No 389
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.02 E-value=5e-12 Score=133.38 Aligned_cols=130 Identities=18% Similarity=0.232 Sum_probs=103.7
Q ss_pred CCCceEEEeeCCcCCCC-CC-CcCCCCcccEEeccCCcCcccCCCccccc-CccEEEccCc-cCCCC-CCcccCCCcccc
Q 005224 1 MSKLLKLSLRNCSLQGP-MP-DLSRIPNLGYLDLSSNQLNGSIPPGRLSL-NITTIKLSNN-KLTGT-IPSNFSGLPRLQ 75 (707)
Q Consensus 1 L~~L~~L~L~~N~l~~~-~~-~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~-~L~~L~Ls~N-~l~~~-~p~~~~~l~~L~ 75 (707)
+++|+.|+|++|.+++. .+ .+..+++|++|+|++|.+++.+|..+... +|++|+|++| .+++. ++..+.++++|+
T Consensus 92 ~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~ 171 (336)
T 2ast_B 92 PFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLD 171 (336)
T ss_dssp CBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCC
T ss_pred CCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCC
Confidence 46899999999999864 55 58889999999999999997777666555 8999999999 68863 777788899999
Q ss_pred eEeccCc-ccccC-CCCCccccc-cCCCCccceEEccCcc--CC--CCCCCC-CCCCCceeeccCCCc
Q 005224 76 RLFIANN-SLSGS-IPSSIWQSR-TLNATETFILDFQNNN--LT--NISGSF-NIPPNVTVRLRGNPF 135 (707)
Q Consensus 76 ~L~ls~N-~l~g~-~p~~~~~l~-~L~~~~L~~l~l~~N~--l~--~~~~~~-~~~~l~~l~l~~N~~ 135 (707)
+|+|++| .+++. ++..+..++ +|+ .|+|++|. ++ .++..+ .+++|+.|++++|.+
T Consensus 172 ~L~l~~~~~l~~~~~~~~~~~l~~~L~-----~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~ 234 (336)
T 2ast_B 172 ELNLSWCFDFTEKHVQVAVAHVSETIT-----QLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVM 234 (336)
T ss_dssp EEECCCCTTCCHHHHHHHHHHSCTTCC-----EEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTT
T ss_pred EEcCCCCCCcChHHHHHHHHhcccCCC-----EEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCc
Confidence 9999999 88854 566666666 555 99999994 44 344443 688999999999983
No 390
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.01 E-value=9.9e-10 Score=116.65 Aligned_cols=130 Identities=18% Similarity=0.249 Sum_probs=88.6
Q ss_pred CCce-EEEeeCCcCCCCCC-CcCCCCcccEEeccCCcCcccCCCcccc-c-CccEEEccC-ccCCCCCCcccCCCc-ccc
Q 005224 2 SKLL-KLSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQLNGSIPPGRLS-L-NITTIKLSN-NKLTGTIPSNFSGLP-RLQ 75 (707)
Q Consensus 2 ~~L~-~L~L~~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~g~ip~~~~~-~-~L~~L~Ls~-N~l~~~~p~~~~~l~-~L~ 75 (707)
++|. .+++++|+|+.++| .|..+++|++|++++|+|+ .+|...+. . ++..|++++ |+++...+..|..+. .|+
T Consensus 79 ~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~-~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~ 157 (350)
T 4ay9_X 79 PKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIK-HLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESV 157 (350)
T ss_dssp TTCCEEEEEEETTCCEECTTSBCCCTTCCEEEEEEECCS-SCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCE
T ss_pred hhhhhhhcccCCcccccCchhhhhccccccccccccccc-cCCchhhcccchhhhhhhccccccccccccchhhcchhhh
Confidence 3444 46777888888877 5888888999999988888 66654332 2 667777754 567654555666664 577
Q ss_pred eEeccCcccccCCCCCccccccCCCCccceEEcc-CccCCCCCCCC--CCCCCceeeccCCCcccc
Q 005224 76 RLFIANNSLSGSIPSSIWQSRTLNATETFILDFQ-NNNLTNISGSF--NIPPNVTVRLRGNPFCLN 138 (707)
Q Consensus 76 ~L~ls~N~l~g~~p~~~~~l~~L~~~~L~~l~l~-~N~l~~~~~~~--~~~~l~~l~l~~N~~~~~ 138 (707)
.|+|++|+|+ .+|.......+ |+.|+++ +|.++.+|... .+++|+.|++++|++..-
T Consensus 158 ~L~L~~N~i~-~i~~~~f~~~~-----L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~l 217 (350)
T 4ay9_X 158 ILWLNKNGIQ-EIHNSAFNGTQ-----LDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSL 217 (350)
T ss_dssp EEECCSSCCC-EECTTSSTTEE-----EEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCC
T ss_pred hhcccccccc-CCChhhccccc-----hhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCcc
Confidence 7888888887 56655544333 3477776 47777777643 677777888888877543
No 391
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=98.99 E-value=4.5e-11 Score=127.66 Aligned_cols=134 Identities=22% Similarity=0.273 Sum_probs=87.7
Q ss_pred CceEEEeeCCcCCCCCC-CcCCC-----CcccEEeccCCcCcccCCCcccc------cCccEEEccCccCCCCCCcccCC
Q 005224 3 KLLKLSLRNCSLQGPMP-DLSRI-----PNLGYLDLSSNQLNGSIPPGRLS------LNITTIKLSNNKLTGTIPSNFSG 70 (707)
Q Consensus 3 ~L~~L~L~~N~l~~~~~-~~~~l-----~~L~~L~Ls~N~l~g~ip~~~~~------~~L~~L~Ls~N~l~~~~p~~~~~ 70 (707)
+|++|+|++|+|++..+ .|..+ ++|++|+|++|+|++..+..+.. .+|+.|+|++|+|++..+..+..
T Consensus 52 ~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~ 131 (362)
T 3goz_A 52 SVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQ 131 (362)
T ss_dssp TCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHH
T ss_pred ceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHH
Confidence 78888888888887765 45554 88888888888888444432221 26888888888888665554433
Q ss_pred -----CcccceEeccCcccccCCCCCcccc-ccCCCCccceEEccCccCCCCCCC-----C-CC-CCCceeeccCCCccc
Q 005224 71 -----LPRLQRLFIANNSLSGSIPSSIWQS-RTLNATETFILDFQNNNLTNISGS-----F-NI-PPNVTVRLRGNPFCL 137 (707)
Q Consensus 71 -----l~~L~~L~ls~N~l~g~~p~~~~~l-~~L~~~~L~~l~l~~N~l~~~~~~-----~-~~-~~l~~l~l~~N~~~~ 137 (707)
.++|++|+|++|+|++..+..+... ..+ ..+|+.|+|++|+|+..... + .. ++|+.|+|++|.+..
T Consensus 132 ~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~-~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~ 210 (362)
T 3goz_A 132 AFSNLPASITSLNLRGNDLGIKSSDELIQILAAI-PANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGL 210 (362)
T ss_dssp HHTTSCTTCCEEECTTSCGGGSCHHHHHHHHHTS-CTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGG
T ss_pred HHHhCCCceeEEEccCCcCCHHHHHHHHHHHhcC-CccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCCh
Confidence 2588888888888875433333211 111 02455888888888765431 1 34 478888888888754
No 392
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.99 E-value=8.8e-10 Score=117.43 Aligned_cols=142 Identities=23% Similarity=0.329 Sum_probs=106.6
Q ss_pred ccceEeeeCceEEEEEEeCCCcEEEEEEec--cCC-hhhHHHHHHHHHHHHccC--CCcceeEEEEEEeC---CeEEEEE
Q 005224 379 SSTQIGQGGYGKVYKGILPDGTVVAVKRAQ--EGS-LQGEKEFLTEIQFLSRLH--HRNLVSLVGYCDEE---GEQMLVY 450 (707)
Q Consensus 379 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~--~~~-~~~~~~~~~E~~~l~~l~--H~nIv~l~~~~~~~---~~~~lV~ 450 (707)
..+.|+.|.++.||+....+ ..+++|+.. ... ......+.+|+.+++.+. +..+.+++.++.+. +..++||
T Consensus 42 ~~~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vm 120 (359)
T 3dxp_A 42 SVEQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIM 120 (359)
T ss_dssp EEEECCC-CCSCEEEEECSS-CEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEE
T ss_pred eEEEcCCcccceEEEEEECC-ceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEE
Confidence 35778999999999998754 578888776 322 122456888999999997 45578899988766 4589999
Q ss_pred ecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCC-------------------------------------
Q 005224 451 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEA------------------------------------- 493 (707)
Q Consensus 451 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~------------------------------------- 493 (707)
||++|..+.+. ....++...+..++.++++.|+.||+..
T Consensus 121 e~v~G~~l~~~----~~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (359)
T 3dxp_A 121 EFVSGRVLWDQ----SLPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPA 196 (359)
T ss_dssp ECCCCBCCCCT----TCTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHH
T ss_pred EecCCeecCCC----ccccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChH
Confidence 99998776431 1223678888899999999999999731
Q ss_pred ------------------CCCeEecCCCCCCEEEcCCCc--EEEeeeccccc
Q 005224 494 ------------------DPPVFHRDIKASNILLDHKFT--AKVADFGLSRL 525 (707)
Q Consensus 494 ------------------~~~ivH~Dlkp~NILl~~~~~--~kl~DFGla~~ 525 (707)
.+.++|+|+++.||++++++. +.|.||+.+..
T Consensus 197 ~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 197 MDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp HHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred HHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 245999999999999997753 68999998864
No 393
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.91 E-value=1.9e-09 Score=112.08 Aligned_cols=192 Identities=16% Similarity=0.158 Sum_probs=122.3
Q ss_pred cceEeeeCceEEEEEEeCCCcEEEEEEeccCChhhHHHHHHHHHHHHccC-CCc--ceeEEEEEEeCC---eEEEEEecC
Q 005224 380 STQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLH-HRN--LVSLVGYCDEEG---EQMLVYEFM 453 (707)
Q Consensus 380 ~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-H~n--Iv~l~~~~~~~~---~~~lV~E~~ 453 (707)
.+.++.|....||+.. ..+++|+.... .....+.+|+++++.+. +.. +.+++......+ ..|+|||++
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i 98 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKI 98 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECC
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEccc
Confidence 4669999999999864 45888886532 34567889999998883 333 344555443333 358899999
Q ss_pred CCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhC-----------------------------------------
Q 005224 454 SNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTE----------------------------------------- 492 (707)
Q Consensus 454 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~----------------------------------------- 492 (707)
+|.++.+... ..++...+..++.++++.|+.||+.
T Consensus 99 ~G~~l~~~~~----~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 174 (304)
T 3sg8_A 99 KGVPLTPLLL----NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVD 174 (304)
T ss_dssp CCEECCHHHH----HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHH
T ss_pred CCeECCcccc----ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHH
Confidence 9988865432 1366777788888888888888861
Q ss_pred --------------CCCCeEecCCCCCCEEEcC--CCcEEEeeecccccCCCCC-CCCcc------ccceecccccCCCc
Q 005224 493 --------------ADPPVFHRDIKASNILLDH--KFTAKVADFGLSRLAPVPD-IEGIV------PAHVSTVVKGTPGY 549 (707)
Q Consensus 493 --------------~~~~ivH~Dlkp~NILl~~--~~~~kl~DFGla~~~~~~~-~~~~~------~~~~~~~~~gt~~y 549 (707)
..+.++|+|+++.||++++ ...+.|+||+.+..-.... ..... ...........++.
T Consensus 175 ~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~~Y~~ 254 (304)
T 3sg8_A 175 DFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNHYKH 254 (304)
T ss_dssp HHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHHHHTC
T ss_pred HHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHHHcCC
Confidence 1244899999999999998 5568899999886532110 00000 00000000001111
Q ss_pred cc-hhhhccCCCCCchhhHHHHHHHHHHHcCCCCC
Q 005224 550 LD-PEYFLTHKLTDKSDVYSLGVVFLELLTGMQPI 583 (707)
Q Consensus 550 ~a-PE~~~~~~~s~~sDVwS~Gvll~elltG~~pf 583 (707)
.. |+..... ....+.|++|.++|++.+|..+|
T Consensus 255 ~~~~~~~~r~--~~~~~~~~l~~~~~~~~~g~~~~ 287 (304)
T 3sg8_A 255 KDIPTVLEKY--RMKEKYWSFEKIIYGKEYGYMDW 287 (304)
T ss_dssp SCHHHHHHHH--HHHHHHHHHHHHHHHHHTTCHHH
T ss_pred CCcHHHHHHH--HHHHHHHHHHHHHHHHHcCCHHH
Confidence 22 2222111 12368999999999999997766
No 394
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=98.88 E-value=3.4e-11 Score=132.84 Aligned_cols=88 Identities=14% Similarity=0.130 Sum_probs=40.7
Q ss_pred CccEEEccCccCCCC----CCcccCCCcccceEeccCcccccCCCCCccccccCCCCccceEEccCccCC-----CCCCC
Q 005224 49 NITTIKLSNNKLTGT----IPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLT-----NISGS 119 (707)
Q Consensus 49 ~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~~~L~~l~l~~N~l~-----~~~~~ 119 (707)
+|+.|+|++|.+++. ++..+..+++|+.|+|++|++++..+..+...-.-..++|+.|+|++|+++ .++..
T Consensus 314 ~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~ 393 (461)
T 1z7x_W 314 QLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAAT 393 (461)
T ss_dssp CCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHH
T ss_pred cceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHH
Confidence 455555555555433 334444455555555555555533233222100000123345666666655 23333
Q ss_pred C-CCCCCceeeccCCCcc
Q 005224 120 F-NIPPNVTVRLRGNPFC 136 (707)
Q Consensus 120 ~-~~~~l~~l~l~~N~~~ 136 (707)
+ .+++|+.|++++|++.
T Consensus 394 l~~~~~L~~L~l~~N~i~ 411 (461)
T 1z7x_W 394 LLANHSLRELDLSNNCLG 411 (461)
T ss_dssp HHHCCCCCEEECCSSSCC
T ss_pred HHhCCCccEEECCCCCCC
Confidence 3 4555666666666553
No 395
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=98.81 E-value=1.2e-10 Score=128.44 Aligned_cols=135 Identities=24% Similarity=0.284 Sum_probs=83.4
Q ss_pred CCceEEEeeCCcCCCC----CC-CcCCCCcccEEeccCCcCcccCCCcccc-c-----CccEEEccCccCCC----CCCc
Q 005224 2 SKLLKLSLRNCSLQGP----MP-DLSRIPNLGYLDLSSNQLNGSIPPGRLS-L-----NITTIKLSNNKLTG----TIPS 66 (707)
Q Consensus 2 ~~L~~L~L~~N~l~~~----~~-~~~~l~~L~~L~Ls~N~l~g~ip~~~~~-~-----~L~~L~Ls~N~l~~----~~p~ 66 (707)
++|+.|+|++|+++.. ++ .+..+++|++|+|++|.+++..+..+.. . +|++|+|++|+|+. .+|.
T Consensus 28 ~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~ 107 (461)
T 1z7x_W 28 QQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSS 107 (461)
T ss_dssp TTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCSTTCCCCEEECTTSCCBGGGHHHHHH
T ss_pred CCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhhCCCceeEEEccCCCCCHHHHHHHHH
Confidence 5677777777777642 12 4666777777888777776432322221 1 47788888887773 4577
Q ss_pred ccCCCcccceEeccCcccccCCCCCccccccCCCCccceEEccCccCCCCC-----CCC-CCCCCceeeccCCCcc
Q 005224 67 NFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNIS-----GSF-NIPPNVTVRLRGNPFC 136 (707)
Q Consensus 67 ~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~~~L~~l~l~~N~l~~~~-----~~~-~~~~l~~l~l~~N~~~ 136 (707)
.|..+++|++|+|++|.+++..+..+...-.-...+|+.|+|++|+++... ..+ .+++|+.|++++|++.
T Consensus 108 ~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~ 183 (461)
T 1z7x_W 108 TLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDIN 183 (461)
T ss_dssp HTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSBCH
T ss_pred HHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHHHHHHhhCCCCCEEECcCCCcc
Confidence 777778888888888877644333333210001224557888888777632 122 4577788888887764
No 396
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=98.71 E-value=1.8e-08 Score=105.81 Aligned_cols=131 Identities=14% Similarity=0.142 Sum_probs=100.6
Q ss_pred CCCceEEEeeCCcCC--------------------CCCC-CcCC--------CCcccEEeccCCcCcccCCCccccc--C
Q 005224 1 MSKLLKLSLRNCSLQ--------------------GPMP-DLSR--------IPNLGYLDLSSNQLNGSIPPGRLSL--N 49 (707)
Q Consensus 1 L~~L~~L~L~~N~l~--------------------~~~~-~~~~--------l~~L~~L~Ls~N~l~g~ip~~~~~~--~ 49 (707)
+++|+.|||++|+|. .+++ .|.+ +++|+.|+|++ +++ .|+...|.. +
T Consensus 48 l~~L~~LdLs~n~i~~~~~~~~~~~~~~~~~~~~~~I~~~aF~~~~~~~~~g~~~L~~l~L~~-~i~-~I~~~aF~~~~~ 125 (329)
T 3sb4_A 48 FPSLKVLDISNAEIKMYSGKAGTYPNGKFYIYMANFVPAYAFSNVVNGVTKGKQTLEKVILSE-KIK-NIEDAAFKGCDN 125 (329)
T ss_dssp CTTCCEEEEEEEEECCEEESSSSSGGGCCEEECTTEECTTTTEEEETTEEEECTTCCC-CBCT-TCC-EECTTTTTTCTT
T ss_pred hccCeEEecCcceeEEecCccccccccccccccccccCHHHhcccccccccccCCCcEEECCc-ccc-chhHHHhhcCcc
Confidence 578999999999999 2333 5778 99999999999 999 899887764 8
Q ss_pred ccEEEccCccCCCCCCcccCCCcccceEeccCccc----ccCCCCCccccccCC--------------------------
Q 005224 50 ITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSL----SGSIPSSIWQSRTLN-------------------------- 99 (707)
Q Consensus 50 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l----~g~~p~~~~~l~~L~-------------------------- 99 (707)
|+.|+|++|.++...+.+|.++.++..+.++.+.. ...-...+.++..|+
T Consensus 126 L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L~~~i~~~~~~~l~~~~~~~~~~~~~~~ 205 (329)
T 3sb4_A 126 LKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPLETTIQVGAMGKLEDEIMKAGLQPRDIN 205 (329)
T ss_dssp CCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCCEEEEEECTTCCHHHHHHHTTCCGGGCS
T ss_pred cceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccccccccccccceeEEecCCCcHHHHHhhcccCccccc
Confidence 99999999999877788899988888888777432 111122233333332
Q ss_pred -------------------CCccceEEccCccCCCCCCCC--CCCCCceeeccCC
Q 005224 100 -------------------ATETFILDFQNNNLTNISGSF--NIPPNVTVRLRGN 133 (707)
Q Consensus 100 -------------------~~~L~~l~l~~N~l~~~~~~~--~~~~l~~l~l~~N 133 (707)
.++|+.|+|++|+++.++... .+.+|+.++|.+|
T Consensus 206 ~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n 260 (329)
T 3sb4_A 206 FLTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN 260 (329)
T ss_dssp EEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT
T ss_pred eEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc
Confidence 457779999999999998765 7889999999887
No 397
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=98.62 E-value=7.7e-10 Score=118.32 Aligned_cols=36 Identities=22% Similarity=0.204 Sum_probs=16.3
Q ss_pred CceEEEeeCCcCCCCCC-CcC-----CCCcccEEeccCCcCc
Q 005224 3 KLLKLSLRNCSLQGPMP-DLS-----RIPNLGYLDLSSNQLN 38 (707)
Q Consensus 3 ~L~~L~L~~N~l~~~~~-~~~-----~l~~L~~L~Ls~N~l~ 38 (707)
+|+.|+|++|.|+.... .|. ..++|++|+|++|.|+
T Consensus 73 ~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~ 114 (372)
T 3un9_A 73 SLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLD 114 (372)
T ss_dssp TCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCC
T ss_pred hCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCC
Confidence 45555555555543222 111 1145555555555554
No 398
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=98.60 E-value=9.1e-08 Score=100.44 Aligned_cols=129 Identities=14% Similarity=0.121 Sum_probs=98.2
Q ss_pred CCCceEEEeeCCcCCCCCC-CcCCCCcccEEeccCCcCcccCCCc--------------c--------------c-----
Q 005224 1 MSKLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQLNGSIPPG--------------R--------------L----- 46 (707)
Q Consensus 1 L~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~g~ip~~--------------~--------------~----- 46 (707)
|++|+.|+|.+ +++.+.+ .|.++++|+.|+|++|.++ .|+.. . +
T Consensus 100 ~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~-~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~ 177 (329)
T 3sb4_A 100 KQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAP-NLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEP 177 (329)
T ss_dssp CTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCC-EECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCC
T ss_pred cCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCcc-ccchhhhcCCCceEEecCcchhhhhccccccccccccccc
Confidence 57889999988 8887776 6999999999999999864 33332 1 0
Q ss_pred ----------------------------------------------cc-CccEEEccCccCCCCCCcccCCCcccceEec
Q 005224 47 ----------------------------------------------SL-NITTIKLSNNKLTGTIPSNFSGLPRLQRLFI 79 (707)
Q Consensus 47 ----------------------------------------------~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 79 (707)
.+ +|+.|+|++|+++...+.+|.+|++|+.|+|
T Consensus 178 L~~~i~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l 257 (329)
T 3sb4_A 178 LETTIQVGAMGKLEDEIMKAGLQPRDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKL 257 (329)
T ss_dssp CEEEEEECTTCCHHHHHHHTTCCGGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEEC
T ss_pred cceeEEecCCCcHHHHHhhcccCccccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEEC
Confidence 02 7899999999999666678999999999999
Q ss_pred cCcccccCCCCCccccccCCCCccc-eEEccCccCCCCCCCC--CCCCCceeeccCCCcccc
Q 005224 80 ANNSLSGSIPSSIWQSRTLNATETF-ILDFQNNNLTNISGSF--NIPPNVTVRLRGNPFCLN 138 (707)
Q Consensus 80 s~N~l~g~~p~~~~~l~~L~~~~L~-~l~l~~N~l~~~~~~~--~~~~l~~l~l~~N~~~~~ 138 (707)
++| ++..-+.+|.++. +|+ .|++.+ +++.++... .+++|+.+++.+|.+...
T Consensus 258 ~~n-i~~I~~~aF~~~~-----~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I 312 (329)
T 3sb4_A 258 PHN-LKTIGQRVFSNCG-----RLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTL 312 (329)
T ss_dssp CTT-CCEECTTTTTTCT-----TCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEE
T ss_pred Ccc-cceehHHHhhCCh-----hccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCcc
Confidence 998 7733345566654 455 789988 888886544 789999999988887543
No 399
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.58 E-value=1.9e-07 Score=95.92 Aligned_cols=76 Identities=20% Similarity=0.241 Sum_probs=61.6
Q ss_pred ccceEeeeCceEEEEEEeCCCcEEEEEEeccCChhhHHHHHHHHHHHHccCCC---cceeEEEEEEeCCeEEEEEecCCC
Q 005224 379 SSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHR---NLVSLVGYCDEEGEQMLVYEFMSN 455 (707)
Q Consensus 379 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~---nIv~l~~~~~~~~~~~lV~E~~~~ 455 (707)
..+.|+.|.++.||++...+|+.++||+...........+.+|++.|+.+++. .+.+++++. ..++||||+++
T Consensus 19 ~~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l~g 94 (288)
T 3d1u_A 19 AVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDE 94 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCC
T ss_pred ceeeeCCcchhheEEEEeCCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEeccc
Confidence 46789999999999999889999999997543332345789999999999765 577888764 36899999999
Q ss_pred CCH
Q 005224 456 GTL 458 (707)
Q Consensus 456 gsL 458 (707)
+++
T Consensus 95 ~~~ 97 (288)
T 3d1u_A 95 RPP 97 (288)
T ss_dssp CCC
T ss_pred CCC
Confidence 874
No 400
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=98.56 E-value=1.1e-09 Score=116.98 Aligned_cols=130 Identities=21% Similarity=0.230 Sum_probs=94.4
Q ss_pred CCceEEEeeCCcCCCCCC-C-cCCCCcccEEeccCCcCcccCCCccc------ccCccEEEccCccCCC----CCCcccC
Q 005224 2 SKLLKLSLRNCSLQGPMP-D-LSRIPNLGYLDLSSNQLNGSIPPGRL------SLNITTIKLSNNKLTG----TIPSNFS 69 (707)
Q Consensus 2 ~~L~~L~L~~N~l~~~~~-~-~~~l~~L~~L~Ls~N~l~g~ip~~~~------~~~L~~L~Ls~N~l~~----~~p~~~~ 69 (707)
++|+.|+|++|.|+.... . ...+++|+.|+|++|.|+..-...+. ..+|+.|+|++|+|+. .++..+.
T Consensus 101 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~ 180 (372)
T 3un9_A 101 HALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLA 180 (372)
T ss_dssp SCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHH
T ss_pred CCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHh
Confidence 479999999999875432 2 34578999999999999832212211 1279999999999974 2455567
Q ss_pred CCcccceEeccCcccccC----CCCCccccccCCCCccceEEccCccCCCCC-----CCC-CCCCCceeeccCCCcc
Q 005224 70 GLPRLQRLFIANNSLSGS----IPSSIWQSRTLNATETFILDFQNNNLTNIS-----GSF-NIPPNVTVRLRGNPFC 136 (707)
Q Consensus 70 ~l~~L~~L~ls~N~l~g~----~p~~~~~l~~L~~~~L~~l~l~~N~l~~~~-----~~~-~~~~l~~l~l~~N~~~ 136 (707)
.+++|++|+|++|.|+.. ++..+...+ +|+.|+|++|.|+... ..+ ..++|+.|+|++|++.
T Consensus 181 ~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~-----~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~ 252 (372)
T 3un9_A 181 GNTSVTHLSLLHTGLGDEGLELLAAQLDRNR-----QLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELS 252 (372)
T ss_dssp TCSSCCEEECTTSSCHHHHHHHHHHHGGGCS-----CCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCC
T ss_pred cCCCcCEEeCCCCCCCcHHHHHHHHHHhcCC-----CcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCC
Confidence 789999999999999742 233444444 4559999999998642 222 4588999999999874
No 401
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.56 E-value=3.6e-07 Score=95.44 Aligned_cols=136 Identities=15% Similarity=0.179 Sum_probs=101.2
Q ss_pred CCCccceEeeeCceEEEEEEeCCCcEEEEEEeccCChhhHHHHHHHHHHHHccCC----CcceeEEEEEEeCCeEEEEEe
Q 005224 376 NFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHH----RNLVSLVGYCDEEGEQMLVYE 451 (707)
Q Consensus 376 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H----~nIv~l~~~~~~~~~~~lV~E 451 (707)
.....+.++.|....||+. |+.+++|+... ......+.+|.++++.+.+ -.+.+++++ +..++|||
T Consensus 38 ~i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~--~~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvme 107 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC----NEQYVVKVPKR--DSVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIMK 107 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE----TTTEEEEEESS--HHHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEEE
T ss_pred ceEEEEeCCCCCCceEEEE----CCEEEEEeCCc--HHHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEEe
Confidence 5566788999999999998 56788887643 2224568899999998865 224455554 56789999
Q ss_pred cCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCC-------------------------------------
Q 005224 452 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEAD------------------------------------- 494 (707)
Q Consensus 452 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~------------------------------------- 494 (707)
|++|.++.+... ..++...+..++.++++.|+.||+...
T Consensus 108 ~i~G~~l~~~~~----~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (320)
T 3r70_A 108 YIKGERITYEQY----HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLTD 183 (320)
T ss_dssp CCCCBCCCHHHH----TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCCCH
T ss_pred ecCCcccccccc----ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhcccccc
Confidence 999988864331 125666677778888888888885432
Q ss_pred -----------------------CCeEecCCCCCCEEEcCCCcEEEeeeccccc
Q 005224 495 -----------------------PPVFHRDIKASNILLDHKFTAKVADFGLSRL 525 (707)
Q Consensus 495 -----------------------~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~ 525 (707)
+.++|+|++|.||+++++..+.|+||+.+..
T Consensus 184 ~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~ 237 (320)
T 3r70_A 184 EMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNV 237 (320)
T ss_dssp HHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEE
T ss_pred cchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCccccc
Confidence 2359999999999999976679999998864
No 402
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.43 E-value=1.5e-06 Score=88.17 Aligned_cols=135 Identities=16% Similarity=0.141 Sum_probs=99.0
Q ss_pred ceEeeeCce-EEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHccC-CCcceeEEEEEEeCCeEEEEEecCCCCC
Q 005224 381 TQIGQGGYG-KVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLH-HRNLVSLVGYCDEEGEQMLVYEFMSNGT 457 (707)
Q Consensus 381 ~~lG~G~~g-~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~lV~E~~~~gs 457 (707)
+.+..|..| .||+.... ++..+++|+-.. .....+.+|...|+.+. +--+.++++++.+.+..++|||+++|.+
T Consensus 30 ~~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~---~~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~ 106 (272)
T 4gkh_A 30 ARDNVGQSGATIYRLYGKPNAPELFLKHGKG---SVANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKT 106 (272)
T ss_dssp EEEECSSSSCEEEEEECCTTCCCEEEEEEET---HHHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEE
T ss_pred EEccCCCcCCeEEEEEecCCCeEEEEEECCC---CCHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCcc
Confidence 455666665 68988754 567889998654 23456888999998884 3336788899999999999999999988
Q ss_pred HHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCC--------------------------------------------
Q 005224 458 LRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEA-------------------------------------------- 493 (707)
Q Consensus 458 L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~-------------------------------------------- 493 (707)
+.+..... ......++.+++..|.-||+..
T Consensus 107 ~~~~~~~~------~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (272)
T 4gkh_A 107 AFQVLEEY------PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVW 180 (272)
T ss_dssp HHHHHHHC------GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHH
T ss_pred ccccccCC------HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHH
Confidence 87765332 1123346666777777777521
Q ss_pred -----------CCCeEecCCCCCCEEEcCCCcEEEeeecccc
Q 005224 494 -----------DPPVFHRDIKASNILLDHKFTAKVADFGLSR 524 (707)
Q Consensus 494 -----------~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~ 524 (707)
.+.++|+|+.+.|||+++++.+-|+||+.+.
T Consensus 181 ~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~ 222 (272)
T 4gkh_A 181 KEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVG 222 (272)
T ss_dssp HHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred HHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECcccc
Confidence 1238999999999999988777899999775
No 403
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.42 E-value=2.5e-06 Score=88.48 Aligned_cols=136 Identities=21% Similarity=0.204 Sum_probs=93.8
Q ss_pred cceEeeeCceEEEEEEeCCCcEEEEEEeccCChhhHHHHHHHHHHHHccCCC---cceeEEEEEE-eCCeEEEEEecCCC
Q 005224 380 STQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHR---NLVSLVGYCD-EEGEQMLVYEFMSN 455 (707)
Q Consensus 380 ~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~---nIv~l~~~~~-~~~~~~lV~E~~~~ 455 (707)
.+.++.|....||+. |+.+++|+-. .......+.+|+++|+.+.+. .+.+.+.++. ..+..++||||++|
T Consensus 24 v~~l~~G~~n~v~~v----g~~~VlR~~~--~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G 97 (306)
T 3tdw_A 24 VESLGEGFRNYAILV----NGDWVFRFPK--SQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQG 97 (306)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEES--SHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCS
T ss_pred eeecCCCcceeEEEE----CCEEEEEecC--CchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCC
Confidence 567888999999987 5668888753 223456788999999999653 3566677764 45567899999999
Q ss_pred CCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhC-------------------------------------------
Q 005224 456 GTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTE------------------------------------------- 492 (707)
Q Consensus 456 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~------------------------------------------- 492 (707)
.++.+..-. .++...+..++.++++.|+.||+.
T Consensus 98 ~~l~~~~~~----~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l~ 173 (306)
T 3tdw_A 98 QILGEDGMA----VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYLT 173 (306)
T ss_dssp EECHHHHHT----TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHHH
T ss_pred eECchhhhh----hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHHH
Confidence 887663211 133444444455555555555432
Q ss_pred --------------CCCCeEecCCCCCCEEEcC---CCc-EEEeeeccccc
Q 005224 493 --------------ADPPVFHRDIKASNILLDH---KFT-AKVADFGLSRL 525 (707)
Q Consensus 493 --------------~~~~ivH~Dlkp~NILl~~---~~~-~kl~DFGla~~ 525 (707)
..+.++|+|+++.||++++ ++. +.|+||+.+..
T Consensus 174 ~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 174 LRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 2234799999999999987 455 48999998764
No 404
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.25 E-value=5e-06 Score=88.29 Aligned_cols=142 Identities=13% Similarity=0.136 Sum_probs=90.8
Q ss_pred CccceEeeeCceEEEEEEeCCCcEEEEEEeccCChhhHHHHHHHHHHHHccCCCc--ceeEEEEEEeC-CeEEEEEecCC
Q 005224 378 NSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRN--LVSLVGYCDEE-GEQMLVYEFMS 454 (707)
Q Consensus 378 ~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~n--Iv~l~~~~~~~-~~~~lV~E~~~ 454 (707)
...+.++.|....+|+... +++.+++|+.... ..+..|+.+++.+.... +.++++++... +..++||||++
T Consensus 44 ~~i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~-----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l~ 117 (362)
T 3ovc_A 44 SDLMQLSEGEESRAFSFDV-GGRGYVLRVNSCA-----DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQ 117 (362)
T ss_dssp EEEEEEEECSSEEEEEEEE-TTEEEEEEEESCC-----HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECCC
T ss_pred ceEEECCCCCcceEEEEEE-CCcEEEEEeCCch-----hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEecC
Confidence 3467789999999999886 5788999987542 25888999999886533 45677777654 67899999998
Q ss_pred CCCHHH---------------H---HhhcCCC---C------------cCHHHH---------------------HHHHH
Q 005224 455 NGTLRD---------------Q---LSAKSKE---P------------LGFAMR---------------------LSIAL 480 (707)
Q Consensus 455 ~gsL~~---------------~---l~~~~~~---~------------l~~~~~---------------------~~i~~ 480 (707)
|.++.+ . |+..... . -.|... .....
T Consensus 118 G~~l~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~gl~~~~~~~~~~~~~w~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 197 (362)
T 3ovc_A 118 GVTLQDLPETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQTVMDDTVSASVAQ 197 (362)
T ss_dssp SEETTTSCGGGSGGGHHHHHHHHHHHHHCCCTTCBCEEEECTTSBEEESSHHHHHHGGGCTTTCCHHHHCCTTTHHHHHH
T ss_pred CCCcccCCHHHHHHHHHHHHHHHHHHhcCCCccccCccCCCCCCCCccccHHHHHHHHHHHHHHHHHHHHhhcccccchH
Confidence 765531 1 1111100 0 001111 01111
Q ss_pred HHHHHHHHHHhC-CCCCeEecCCCCCCEEEcCCCcEEEeeeccccc
Q 005224 481 GSSRGILYLHTE-ADPPVFHRDIKASNILLDHKFTAKVADFGLSRL 525 (707)
Q Consensus 481 ~ia~gL~yLH~~-~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~ 525 (707)
.+..-+.++... ..+.++|+|+++.||++++++.+.|+||+.+..
T Consensus 198 ~~~~l~~~l~~lp~~~~l~HgDl~~~Nil~~~~~~~~viD~~~~~~ 243 (362)
T 3ovc_A 198 ALDELMLWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAMF 243 (362)
T ss_dssp HHHHHHHHGGGCCCCCEEECSSCSSTTEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHHHHhhCCCCcEEEeCCCCCCeEEEeCCCEEEEECCccccc
Confidence 111222233211 124589999999999998877788999998764
No 405
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=98.24 E-value=1.7e-07 Score=106.46 Aligned_cols=94 Identities=9% Similarity=0.083 Sum_probs=46.9
Q ss_pred ceEEEeeCCcC-CC-CCC-CcCCCCcccEEeccCCcCccc----CCCccccc-CccEEEccCccCC----CCCCcccCCC
Q 005224 4 LLKLSLRNCSL-QG-PMP-DLSRIPNLGYLDLSSNQLNGS----IPPGRLSL-NITTIKLSNNKLT----GTIPSNFSGL 71 (707)
Q Consensus 4 L~~L~L~~N~l-~~-~~~-~~~~l~~L~~L~Ls~N~l~g~----ip~~~~~~-~L~~L~Ls~N~l~----~~~p~~~~~l 71 (707)
|++|+|++|.- +. ..+ -..++++|++|+|++|.+++. ++...... +|+.|+|++|+++ +.++..+.++
T Consensus 140 L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~ 219 (592)
T 3ogk_B 140 LETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNC 219 (592)
T ss_dssp CCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHC
T ss_pred CcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhC
Confidence 66666666651 10 001 123566666666666666532 11111111 5666666666665 2233344556
Q ss_pred cccceEeccCcccccCCCCCccccccC
Q 005224 72 PRLQRLFIANNSLSGSIPSSIWQSRTL 98 (707)
Q Consensus 72 ~~L~~L~ls~N~l~g~~p~~~~~l~~L 98 (707)
++|+.|+|++|.+.+ +|..+..+++|
T Consensus 220 ~~L~~L~L~~~~~~~-l~~~~~~~~~L 245 (592)
T 3ogk_B 220 RSLVSVKVGDFEILE-LVGFFKAAANL 245 (592)
T ss_dssp TTCCEEECSSCBGGG-GHHHHHHCTTC
T ss_pred CCCcEEeccCccHHH-HHHHHhhhhHH
Confidence 666666666666653 44444443333
No 406
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=98.18 E-value=2.6e-07 Score=105.04 Aligned_cols=132 Identities=11% Similarity=0.148 Sum_probs=94.9
Q ss_pred CCCceEEEeeCCcCCCCCC-CcCC-CCcccEEecc----CCcCcccCCCc------cccc-CccEEEccCc--cCCCCCC
Q 005224 1 MSKLLKLSLRNCSLQGPMP-DLSR-IPNLGYLDLS----SNQLNGSIPPG------RLSL-NITTIKLSNN--KLTGTIP 65 (707)
Q Consensus 1 L~~L~~L~L~~N~l~~~~~-~~~~-l~~L~~L~Ls----~N~l~g~ip~~------~~~~-~L~~L~Ls~N--~l~~~~p 65 (707)
+++|+.|+|+.|++++... .++. +++|+.|+|+ .|.++ ..|.. +... +|+.|+|+++ .+++..+
T Consensus 377 ~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~-~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~ 455 (592)
T 3ogk_B 377 CQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERIT-DLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGL 455 (592)
T ss_dssp CTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCS-SCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHH
T ss_pred CccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCcccc-CchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHH
Confidence 5789999999999987655 4555 8899999996 78888 44432 2223 7999999743 4776666
Q ss_pred cccCC-CcccceEeccCccccc-CCCCCccccccCCCCccceEEccCccCCCC--CCCC-CCCCCceeeccCCCcccc
Q 005224 66 SNFSG-LPRLQRLFIANNSLSG-SIPSSIWQSRTLNATETFILDFQNNNLTNI--SGSF-NIPPNVTVRLRGNPFCLN 138 (707)
Q Consensus 66 ~~~~~-l~~L~~L~ls~N~l~g-~~p~~~~~l~~L~~~~L~~l~l~~N~l~~~--~~~~-~~~~l~~l~l~~N~~~~~ 138 (707)
..+.. +++|+.|+|++|++++ .++..+..+++| +.|+|++|.|+.. +... .+++|+.|++++|+++..
T Consensus 456 ~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L-----~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~it~~ 528 (592)
T 3ogk_B 456 SYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNL-----QKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASMT 528 (592)
T ss_dssp HHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTC-----CEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCBCCTT
T ss_pred HHHHHhCccceEeeccCCCCCHHHHHHHHhcCccc-----CeeeccCCCCcHHHHHHHHHhcCccCeeECcCCcCCHH
Confidence 55544 7889999999999875 234444444444 4999999998642 2222 688999999999997543
No 407
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=98.16 E-value=1.3e-06 Score=77.99 Aligned_cols=68 Identities=21% Similarity=0.260 Sum_probs=50.5
Q ss_pred eEeccCcccc-cCCCCCccccccCCCCccceEEccCccCCCCCCCC--CCCCCceeeccCCCccccCCcccccCCCCC
Q 005224 76 RLFIANNSLS-GSIPSSIWQSRTLNATETFILDFQNNNLTNISGSF--NIPPNVTVRLRGNPFCLNTNAEQFCGSHSD 150 (707)
Q Consensus 76 ~L~ls~N~l~-g~~p~~~~~l~~L~~~~L~~l~l~~N~l~~~~~~~--~~~~l~~l~l~~N~~~~~~~~~~~~~~~~~ 150 (707)
.++.+++.|+ ..+|..+. .+|+.|+|++|+|+.++... .+++|+.|+|.+|||.|+|.+..|-.|...
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp-------~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~CdC~l~~l~~wl~~ 82 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP-------VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWRCDCRLVPLRAWLAG 82 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC-------TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCBCSGGGHHHHHHHHT
T ss_pred EEEeCCCCCccccCCCCCC-------cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCeeccCccHHHHHHHHh
Confidence 5666666664 35554432 23457888888888877654 688899999999999999999988888754
No 408
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.14 E-value=1.7e-06 Score=91.68 Aligned_cols=80 Identities=4% Similarity=-0.013 Sum_probs=55.6
Q ss_pred cceE-eeeCceEEEEEEeC-------CCcEEEEEEeccCC---hhhHHHHHHHHHHHHccC-C--CcceeEEEEEEeC--
Q 005224 380 STQI-GQGGYGKVYKGILP-------DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLH-H--RNLVSLVGYCDEE-- 443 (707)
Q Consensus 380 ~~~l-G~G~~g~Vy~~~~~-------~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~-H--~nIv~l~~~~~~~-- 443 (707)
.+.| +.|....+|+.... +++.+++|+..... ......+.+|+.+++.+. + -.+.+++.++.+.
T Consensus 25 ~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~ 104 (357)
T 3ats_A 25 ESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDV 104 (357)
T ss_dssp EEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTT
T ss_pred EEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCc
Confidence 4667 88889999998764 26788899865432 111235678888888874 2 3467788887655
Q ss_pred -CeEEEEEecCCCCCHH
Q 005224 444 -GEQMLVYEFMSNGTLR 459 (707)
Q Consensus 444 -~~~~lV~E~~~~gsL~ 459 (707)
+..++||||++|.++.
T Consensus 105 ~g~~~~v~e~l~G~~l~ 121 (357)
T 3ats_A 105 LGTPFFLMDYVEGVVPP 121 (357)
T ss_dssp TSSCEEEEECCCCBCCC
T ss_pred cCCceEEEEecCCCChh
Confidence 3568999999886643
No 409
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.13 E-value=8.7e-07 Score=89.27 Aligned_cols=82 Identities=22% Similarity=0.289 Sum_probs=59.1
Q ss_pred EEeeCCcCCCCC---C-CcCCCCcccEEeccCCcCcc--cCCCccccc-CccEEEccCccCCCCCCcccCCCc--ccceE
Q 005224 7 LSLRNCSLQGPM---P-DLSRIPNLGYLDLSSNQLNG--SIPPGRLSL-NITTIKLSNNKLTGTIPSNFSGLP--RLQRL 77 (707)
Q Consensus 7 L~L~~N~l~~~~---~-~~~~l~~L~~L~Ls~N~l~g--~ip~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~--~L~~L 77 (707)
++++.|+..... + ...++++|+.|+|++|+|++ .+|..+..+ +|+.|+|++|+|++. ..+..+. +|++|
T Consensus 148 l~l~~N~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L 225 (267)
T 3rw6_A 148 IDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEEL 225 (267)
T ss_dssp CCCCTTSHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEE
T ss_pred ccccCCHHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceE
Confidence 566777443222 2 12468899999999999994 344433334 899999999999964 4455555 89999
Q ss_pred eccCcccccCCCC
Q 005224 78 FIANNSLSGSIPS 90 (707)
Q Consensus 78 ~ls~N~l~g~~p~ 90 (707)
+|++|.+++.+|+
T Consensus 226 ~L~~Npl~~~~~~ 238 (267)
T 3rw6_A 226 WLDGNSLCDTFRD 238 (267)
T ss_dssp ECTTSTTGGGCSS
T ss_pred EccCCcCccccCc
Confidence 9999999988874
No 410
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.11 E-value=1.5e-06 Score=87.59 Aligned_cols=113 Identities=19% Similarity=0.240 Sum_probs=80.9
Q ss_pred CCcCCCCCC--CcCCCCcccE--EeccCCcCcccCCCccc----cc-CccEEEccCccCCC--CCCcccCCCcccceEec
Q 005224 11 NCSLQGPMP--DLSRIPNLGY--LDLSSNQLNGSIPPGRL----SL-NITTIKLSNNKLTG--TIPSNFSGLPRLQRLFI 79 (707)
Q Consensus 11 ~N~l~~~~~--~~~~l~~L~~--L~Ls~N~l~g~ip~~~~----~~-~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~l 79 (707)
+|..++.++ .|...+.|.. ++++.|+.. .++..+. .+ +|+.|+|++|+|++ .+|..+..+++|+.|+|
T Consensus 125 yn~~~~~LdLs~l~~dp~L~~~~l~l~~N~~~-~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~L 203 (267)
T 3rw6_A 125 YDGSQQALDLKGLRSDPDLVAQNIDVVLNRRS-CMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNL 203 (267)
T ss_dssp EETTTTEEECTTGGGCHHHHHTTCCCCTTSHH-HHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEEC
T ss_pred cchhccccCHHHcCCCcchhhcCccccCCHHH-HHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEEC
Confidence 344444443 3667777877 889999766 5554221 12 89999999999997 55677889999999999
Q ss_pred cCcccccCCCCCccccccCCCCccceEEccCccCCC-CCC-------CC-CCCCCceee
Q 005224 80 ANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTN-ISG-------SF-NIPPNVTVR 129 (707)
Q Consensus 80 s~N~l~g~~p~~~~~l~~L~~~~L~~l~l~~N~l~~-~~~-------~~-~~~~l~~l~ 129 (707)
++|+|++. ..+..+..+ +|+.|+|++|.|++ +|. .+ .+|+|..|+
T Consensus 204 s~N~i~~~--~~l~~l~~l---~L~~L~L~~Npl~~~~~~~~~y~~~il~~~P~L~~LD 257 (267)
T 3rw6_A 204 SGNELKSE--RELDKIKGL---KLEELWLDGNSLCDTFRDQSTYISAIRERFPKLLRLD 257 (267)
T ss_dssp TTSCCCSG--GGGGGGTTS---CCSEEECTTSTTGGGCSSHHHHHHHHHHHCTTCCEES
T ss_pred CCCccCCc--hhhhhcccC---CcceEEccCCcCccccCcchhHHHHHHHHCcccCeEC
Confidence 99999944 345555432 67799999999986 231 12 678888765
No 411
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.04 E-value=2.1e-07 Score=88.95 Aligned_cols=111 Identities=12% Similarity=0.110 Sum_probs=55.8
Q ss_pred cCCCCcccEEeccCC-cCccc----CCCccccc-CccEEEccCccCCCC----CCcccCCCcccceEeccCcccccC---
Q 005224 21 LSRIPNLGYLDLSSN-QLNGS----IPPGRLSL-NITTIKLSNNKLTGT----IPSNFSGLPRLQRLFIANNSLSGS--- 87 (707)
Q Consensus 21 ~~~l~~L~~L~Ls~N-~l~g~----ip~~~~~~-~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~ls~N~l~g~--- 87 (707)
+...++|++|+|++| .|... +...+... +|++|+|++|+|... +...+...+.|++|+|++|.|...
T Consensus 32 l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~ 111 (185)
T 1io0_A 32 QNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGIL 111 (185)
T ss_dssp HTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHH
T ss_pred HhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHH
Confidence 344566666666666 65521 11111111 566666666666532 223334445666666666666522
Q ss_pred -CCCCccccccCCCCccceEEc--cCccCCCC-----CCCC-CCCCCceeeccCCCcc
Q 005224 88 -IPSSIWQSRTLNATETFILDF--QNNNLTNI-----SGSF-NIPPNVTVRLRGNPFC 136 (707)
Q Consensus 88 -~p~~~~~l~~L~~~~L~~l~l--~~N~l~~~-----~~~~-~~~~l~~l~l~~N~~~ 136 (707)
+...+...+ +|+.|+| ++|.|+.- ...+ ..+.|+.|+|++|.+.
T Consensus 112 ~l~~~L~~n~-----~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 112 ALVEALQSNT-----SLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHGGGGCS-----SCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHHHhCC-----CceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 222333322 2336666 56666542 1111 3456677777777653
No 412
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=97.97 E-value=1.6e-05 Score=85.53 Aligned_cols=122 Identities=20% Similarity=0.254 Sum_probs=89.6
Q ss_pred CceEEEeeCCcCCCCCC-CcCCCCcccEEeccCCcCcccCCCccccc-CccEEEccCccCCCCCCcccCCCcccceEecc
Q 005224 3 KLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQLNGSIPPGRLSL-NITTIKLSNNKLTGTIPSNFSGLPRLQRLFIA 80 (707)
Q Consensus 3 ~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls 80 (707)
+|+.++|.+ .++.+.+ .|.++++|+.++|++|+++ .||...+.. +|+.+.|.+| ++..-..+|.++++|+.++|.
T Consensus 158 ~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~-~I~~~aF~~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~ 234 (401)
T 4fdw_A 158 TVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKIT-KLPASTFVYAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIP 234 (401)
T ss_dssp CCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCS-EECTTTTTTCCCSEEECCTT-CCEECTTTTTTCTTCCCEECC
T ss_pred CceEEEeCC-CccEehHHHhhCcccCCeeecCCCcce-EechhhEeecccCEEEeCCc-hheehhhHhhCCCCCCEEecC
Confidence 467777764 6666665 6888888899999888888 888877766 7888888854 775666788888899999988
Q ss_pred CcccccCCCC-CccccccCCCCccceEEccCccCCCCCCCC--CCCCCceeeccCCCcc
Q 005224 81 NNSLSGSIPS-SIWQSRTLNATETFILDFQNNNLTNISGSF--NIPPNVTVRLRGNPFC 136 (707)
Q Consensus 81 ~N~l~g~~p~-~~~~l~~L~~~~L~~l~l~~N~l~~~~~~~--~~~~l~~l~l~~N~~~ 136 (707)
+| ++ .|+. +|.+ . +|+.++| .|.++.++... .+++|+.+.+.+|...
T Consensus 235 ~~-l~-~I~~~aF~~-~-----~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~ 284 (401)
T 4fdw_A 235 EN-VS-TIGQEAFRE-S-----GITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFN 284 (401)
T ss_dssp TT-CC-EECTTTTTT-C-----CCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCC
T ss_pred CC-cc-Ccccccccc-C-----CccEEEe-CCCccEEChhHhhCCCCCCEEEeCCcccc
Confidence 75 55 4443 3433 3 4458888 56678776544 7888999988887654
No 413
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.95 E-value=2.5e-05 Score=84.03 Aligned_cols=75 Identities=16% Similarity=0.080 Sum_probs=49.8
Q ss_pred cceEeeeCceEEEEEEeC-CCcEEEEEEeccCCh-------hhHHHHHHHHHHHHccCC--Cc-ceeEEEEEEeCCeEEE
Q 005224 380 STQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL-------QGEKEFLTEIQFLSRLHH--RN-LVSLVGYCDEEGEQML 448 (707)
Q Consensus 380 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~l~~~~~-------~~~~~~~~E~~~l~~l~H--~n-Iv~l~~~~~~~~~~~l 448 (707)
.+.||.|.++.||++... +++.|+||....... .....+..|.++++.+.. +. +.+++.+ +.+..++
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l 112 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT 112 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence 567999999999999854 568899998653221 122456779999888742 33 3455543 3455689
Q ss_pred EEecCCCC
Q 005224 449 VYEFMSNG 456 (707)
Q Consensus 449 V~E~~~~g 456 (707)
||||+++.
T Consensus 113 vmE~l~g~ 120 (397)
T 2olc_A 113 VMEDLSHL 120 (397)
T ss_dssp EECCCTTS
T ss_pred EEEeCCCc
Confidence 99999763
No 414
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.94 E-value=3.1e-05 Score=79.30 Aligned_cols=79 Identities=19% Similarity=0.235 Sum_probs=58.4
Q ss_pred CCCccceEeeeCceEEEEEEeCCCcEEEEEEeccCChhhHHHHHHHHHHHHccCC---CcceeEEEEEEeCCeEEEEEec
Q 005224 376 NFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHH---RNLVSLVGYCDEEGEQMLVYEF 452 (707)
Q Consensus 376 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H---~nIv~l~~~~~~~~~~~lV~E~ 452 (707)
.....+.+|.|..+.||+.+..||+.|++|+...........|..|+..|+.+.- --+.+++++. ..++||||
T Consensus 16 ~v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~lv~e~ 91 (288)
T 3f7w_A 16 EVAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEW 91 (288)
T ss_dssp CEEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEEC
T ss_pred CeEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEecc----CceEEEEe
Confidence 4455788999999999999999999999998765444444567889999988842 1244555542 24789999
Q ss_pred CCCCCH
Q 005224 453 MSNGTL 458 (707)
Q Consensus 453 ~~~gsL 458 (707)
++++..
T Consensus 92 l~~~~~ 97 (288)
T 3f7w_A 92 VDERPP 97 (288)
T ss_dssp CCCCCC
T ss_pred ecccCC
Confidence 987653
No 415
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=97.94 E-value=3.4e-07 Score=104.08 Aligned_cols=33 Identities=18% Similarity=0.154 Sum_probs=15.3
Q ss_pred CCcccEEeccCCcCcccCCCcccc-c-CccEEEcc
Q 005224 24 IPNLGYLDLSSNQLNGSIPPGRLS-L-NITTIKLS 56 (707)
Q Consensus 24 l~~L~~L~Ls~N~l~g~ip~~~~~-~-~L~~L~Ls 56 (707)
+++|++|+++.|++++.....+.. . +|+.|+|+
T Consensus 371 ~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~ 405 (594)
T 2p1m_B 371 CPKLESVLYFCRQMTNAALITIARNRPNMTRFRLC 405 (594)
T ss_dssp CTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEE
T ss_pred chhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEee
Confidence 455555555555555332222221 1 45555555
No 416
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=97.91 E-value=3.1e-06 Score=89.60 Aligned_cols=14 Identities=21% Similarity=0.437 Sum_probs=7.3
Q ss_pred CCCCcccEEeccCC
Q 005224 22 SRIPNLGYLDLSSN 35 (707)
Q Consensus 22 ~~l~~L~~L~Ls~N 35 (707)
..+++|+.|+|++|
T Consensus 169 ~~~P~L~~L~L~g~ 182 (362)
T 2ra8_A 169 DAMPLLNNLKIKGT 182 (362)
T ss_dssp HTCTTCCEEEEECC
T ss_pred hcCCCCcEEEEeCC
Confidence 34455555555554
No 417
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=97.91 E-value=2.1e-05 Score=84.59 Aligned_cols=120 Identities=12% Similarity=0.140 Sum_probs=71.5
Q ss_pred CCCceEEEeeCCcCCCCCC-CcCCCCcccEEeccCCcCcccCCCccccc--CccEEEccCccCCCCCCcccCCCcccceE
Q 005224 1 MSKLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQLNGSIPPGRLSL--NITTIKLSNNKLTGTIPSNFSGLPRLQRL 77 (707)
Q Consensus 1 L~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~--~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 77 (707)
|++|+.|+|++|+++.+.. .|. ..+|+.+.|.+| ++ .|+...|.. +|+.|+|.+| ++..-..+|.+ .+|+.+
T Consensus 179 c~~L~~l~l~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~-~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i 253 (401)
T 4fdw_A 179 CYNLKKADLSKTKITKLPASTFV-YAGIEEVLLPVT-LK-EIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTV 253 (401)
T ss_dssp CTTCCEEECTTSCCSEECTTTTT-TCCCSEEECCTT-CC-EECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEE
T ss_pred cccCCeeecCCCcceEechhhEe-ecccCEEEeCCc-hh-eehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEE
Confidence 4689999999988887766 455 577777777744 66 777666543 6777777664 44344445555 566666
Q ss_pred eccCcccccCCCCCccccccCCCCccceEEccCccCC-----CCCCCC--CCCCCceeecc
Q 005224 78 FIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLT-----NISGSF--NIPPNVTVRLR 131 (707)
Q Consensus 78 ~ls~N~l~g~~p~~~~~l~~L~~~~L~~l~l~~N~l~-----~~~~~~--~~~~l~~l~l~ 131 (707)
.| .|.++..-+.+|.++.+|+ .+++.+|.+. .++... .+++|+.+.|.
T Consensus 254 ~l-p~~i~~I~~~aF~~c~~L~-----~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~ 308 (401)
T 4fdw_A 254 KL-PNGVTNIASRAFYYCPELA-----EVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP 308 (401)
T ss_dssp EE-ETTCCEECTTTTTTCTTCC-----EEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC
T ss_pred Ee-CCCccEEChhHhhCCCCCC-----EEEeCCccccCCcccEECHHHhhCCccCCeEEeC
Confidence 66 3334422234455554444 5666665554 333322 55556655555
No 418
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.89 E-value=5.5e-05 Score=79.20 Aligned_cols=140 Identities=19% Similarity=0.185 Sum_probs=79.9
Q ss_pred cceEeeeCceEEEEEEeCCCcEEEEEEeccCChhhHHHHHHHHHHHHccC-----CCcceeEE-E--EEEeCCeEEEEEe
Q 005224 380 STQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLH-----HRNLVSLV-G--YCDEEGEQMLVYE 451 (707)
Q Consensus 380 ~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-----H~nIv~l~-~--~~~~~~~~~lV~E 451 (707)
.+.|+.|..+.||+....+|+ +++|+.... ...+..|..+++.+. .|.++.-. | +....+..++|||
T Consensus 37 ~~~l~gG~~n~~~~v~~~~~~-~vlk~~~~~----~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~ 111 (346)
T 2q83_A 37 IDVIQGNQMALVWKVHTDSGA-VCLKRIHRP----EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYD 111 (346)
T ss_dssp EEECC----CEEEEEEETTEE-EEEEEECSC----HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEE
T ss_pred eeeccccccCcEEEEEeCCCC-EEEEecCCC----HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEE
Confidence 345666778999999876554 889988752 233444555555542 34443310 0 1234677899999
Q ss_pred cCCCCCHH-----------H---HHhhc--C---CC-------CcCHHHH------------------------------
Q 005224 452 FMSNGTLR-----------D---QLSAK--S---KE-------PLGFAMR------------------------------ 475 (707)
Q Consensus 452 ~~~~gsL~-----------~---~l~~~--~---~~-------~l~~~~~------------------------------ 475 (707)
|++|.++. . .+|.. . .. ...|...
T Consensus 112 ~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 191 (346)
T 2q83_A 112 WIEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQE 191 (346)
T ss_dssp CCCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHH
T ss_pred eecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHH
Confidence 99986532 1 12211 0 00 0122211
Q ss_pred -HHHHHHHHHHHHHHHh----------CCCCCeEecCCCCCCEEEcCCCcEEEeeecccc
Q 005224 476 -LSIALGSSRGILYLHT----------EADPPVFHRDIKASNILLDHKFTAKVADFGLSR 524 (707)
Q Consensus 476 -~~i~~~ia~gL~yLH~----------~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~ 524 (707)
..+...+.+++++|+. .....++|+|+++.||+++.++.+.|+||+.+.
T Consensus 192 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 192 IDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp HHHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred HHHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 0111223345667763 123459999999999999888899999999775
No 419
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.80 E-value=0.00012 Score=75.80 Aligned_cols=138 Identities=16% Similarity=0.147 Sum_probs=92.8
Q ss_pred ccceEeeeCceEEEEEEeCCCcEEEEEEeccCChhhHHHHHHHHHHHHccC---CCcceeEEEEEEeCCeEEEEEecCCC
Q 005224 379 SSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLH---HRNLVSLVGYCDEEGEQMLVYEFMSN 455 (707)
Q Consensus 379 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~---H~nIv~l~~~~~~~~~~~lV~E~~~~ 455 (707)
..+.|+.|....+|+... ++..+++|+.... ....+..|++.|+.+. ...+.++++++...+..++||||+++
T Consensus 40 ~~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G 115 (312)
T 3jr1_A 40 HKEKLYSGEMNEIWLIND-EVQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNK 115 (312)
T ss_dssp EEEEECCSSSSEEEEEES-SSCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCC
T ss_pred eeEEeCCccceeeeEEEE-CCCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccC
Confidence 457799999999999886 4677888987542 3457888999998883 35688899988888899999999998
Q ss_pred CCHH--------H---HHhhcCC-C-------------------CcCHHHHH---HHH----------------HHHHHH
Q 005224 456 GTLR--------D---QLSAKSK-E-------------------PLGFAMRL---SIA----------------LGSSRG 485 (707)
Q Consensus 456 gsL~--------~---~l~~~~~-~-------------------~l~~~~~~---~i~----------------~~ia~g 485 (707)
..+. . .|+.... . .-+|.... ++. ..+...
T Consensus 116 ~~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~~ 195 (312)
T 3jr1_A 116 SKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQI 195 (312)
T ss_dssp CCCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHHH
T ss_pred CCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHH
Confidence 7642 1 1222211 1 01344321 111 111111
Q ss_pred -HHHHHh-CCCCCeEecCCCCCCEEEcCCCcEEEeeec
Q 005224 486 -ILYLHT-EADPPVFHRDIKASNILLDHKFTAKVADFG 521 (707)
Q Consensus 486 -L~yLH~-~~~~~ivH~Dlkp~NILl~~~~~~kl~DFG 521 (707)
...|.. ...+.++|+|+.+.|++++.++ +.|.||.
T Consensus 196 l~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 196 VADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 223432 2346699999999999999887 8899974
No 420
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=97.79 E-value=1.4e-06 Score=83.19 Aligned_cols=109 Identities=12% Similarity=0.194 Sum_probs=79.3
Q ss_pred CCceEEEeeCC-cCCCCC-----CCcCCCCcccEEeccCCcCccc----CCCccccc-CccEEEccCccCCCC----CCc
Q 005224 2 SKLLKLSLRNC-SLQGPM-----PDLSRIPNLGYLDLSSNQLNGS----IPPGRLSL-NITTIKLSNNKLTGT----IPS 66 (707)
Q Consensus 2 ~~L~~L~L~~N-~l~~~~-----~~~~~l~~L~~L~Ls~N~l~g~----ip~~~~~~-~L~~L~Ls~N~l~~~----~p~ 66 (707)
++|++|+|++| .|...- ..+...++|++|+|++|.|... +...+... +|++|+|++|+|+.. +..
T Consensus 36 ~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l~~ 115 (185)
T 1io0_A 36 PDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALVE 115 (185)
T ss_dssp TTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHHH
T ss_pred CCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHHHH
Confidence 57999999999 887521 2467788999999999999831 11122222 799999999999854 456
Q ss_pred ccCCCcccceEec--cCcccccC----CCCCccccccCCCCccceEEccCccCCC
Q 005224 67 NFSGLPRLQRLFI--ANNSLSGS----IPSSIWQSRTLNATETFILDFQNNNLTN 115 (707)
Q Consensus 67 ~~~~l~~L~~L~l--s~N~l~g~----~p~~~~~l~~L~~~~L~~l~l~~N~l~~ 115 (707)
.+...+.|++|+| ++|.|... +...+...+ +|+.|+|++|.+..
T Consensus 116 ~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~-----~L~~L~L~~n~i~~ 165 (185)
T 1io0_A 116 ALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNT-----TLLKFGYHFTQQGP 165 (185)
T ss_dssp GGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCS-----SCCEEECCCSSHHH
T ss_pred HHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCC-----CcCEEeccCCCCCh
Confidence 7778889999999 88999743 222333333 45599999998753
No 421
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=97.78 E-value=1.3e-06 Score=99.10 Aligned_cols=131 Identities=14% Similarity=0.091 Sum_probs=91.0
Q ss_pred CCCceEEEeeCCcCC---CCCC-C------------cCCCCcccEEeccCCcCcccCCCccc-cc-CccEEEccCc-cCC
Q 005224 1 MSKLLKLSLRNCSLQ---GPMP-D------------LSRIPNLGYLDLSSNQLNGSIPPGRL-SL-NITTIKLSNN-KLT 61 (707)
Q Consensus 1 L~~L~~L~L~~N~l~---~~~~-~------------~~~l~~L~~L~Ls~N~l~g~ip~~~~-~~-~L~~L~Ls~N-~l~ 61 (707)
+++|+.|+|++|... +..| . +..+++|++|+|++|.+++..+..+. .. +|+.|+|++| .++
T Consensus 65 ~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~ 144 (594)
T 2p1m_B 65 FPKVRSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFS 144 (594)
T ss_dssp CTTCCEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEE
T ss_pred CCCceEEeccCCCchhhcccccccccchhhHHHHHHHHhCCCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCC
Confidence 468999999997632 1222 2 23578999999999998866555543 23 8999999998 565
Q ss_pred CC-CCcccCCCcccceEeccCcccccCCCCCccccccCCCCccceEEccCccCCCCCCC-----C-CCCCCceeeccCC
Q 005224 62 GT-IPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGS-----F-NIPPNVTVRLRGN 133 (707)
Q Consensus 62 ~~-~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~~~L~~l~l~~N~l~~~~~~-----~-~~~~l~~l~l~~N 133 (707)
.. ++..+.++++|++|+|++|.+++..+..+..+.. ..++|+.|+|++|. ..+... . .+++|+.|++++|
T Consensus 145 ~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~-~~~~L~~L~l~~~~-~~~~~~~l~~l~~~~~~L~~L~L~~~ 221 (594)
T 2p1m_B 145 TDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPD-TYTSLVSLNISCLA-SEVSFSALERLVTRCPNLKSLKLNRA 221 (594)
T ss_dssp HHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCT-TCCCCCEEECTTCC-SCCCHHHHHHHHHHCTTCCEEECCTT
T ss_pred HHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhh-cCCcCcEEEecccC-CcCCHHHHHHHHHhCCCCcEEecCCC
Confidence 32 4455558899999999999988665555543321 23466699999987 322211 1 4688999999988
No 422
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=97.62 E-value=7.6e-06 Score=86.65 Aligned_cols=132 Identities=19% Similarity=0.181 Sum_probs=88.2
Q ss_pred CCCceEEEeeCCcCCCCCCCcCCCCcccEEeccCCcCcccCCCccc--cc-CccEEEccC--ccCCCC-----CCccc--
Q 005224 1 MSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRL--SL-NITTIKLSN--NKLTGT-----IPSNF-- 68 (707)
Q Consensus 1 L~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~g~ip~~~~--~~-~L~~L~Ls~--N~l~~~-----~p~~~-- 68 (707)
+++|+.|+|++|.-...++ + .+++|+.|+|..|.++...-..+. .+ +|+.|+|+. |...+. +...+
T Consensus 171 ~P~L~~L~L~g~~~l~l~~-~-~~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~ 248 (362)
T 2ra8_A 171 MPLLNNLKIKGTNNLSIGK-K-PRPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSK 248 (362)
T ss_dssp CTTCCEEEEECCBTCBCCS-C-BCTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCT
T ss_pred CCCCcEEEEeCCCCceecc-c-cCCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHhc
Confidence 4789999999883122333 4 389999999999988732222222 22 899999863 332221 11123
Q ss_pred CCCcccceEeccCcccccCCCCCccccccCCCCccceEEccCccCCC-----CCCCC-CCCCCceeeccCCCcc
Q 005224 69 SGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTN-----ISGSF-NIPPNVTVRLRGNPFC 136 (707)
Q Consensus 69 ~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~~~L~~l~l~~N~l~~-----~~~~~-~~~~l~~l~l~~N~~~ 136 (707)
..+++|++|+|++|.+.+..+..+.... .+++|++|+|+.|.|+. +...+ .+++|+.|+|++|.+.
T Consensus 249 ~~~p~Lr~L~L~~~~i~~~~~~~la~a~--~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~ 320 (362)
T 2ra8_A 249 DRFPNLKWLGIVDAEEQNVVVEMFLESD--ILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLS 320 (362)
T ss_dssp TTCTTCCEEEEESCTTHHHHHHHHHHCS--SGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCC
T ss_pred CCCCCcCEEeCCCCCCchHHHHHHHhCc--cCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCC
Confidence 3578999999999999854444444321 23566799999999987 33332 5789999999999874
No 423
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.54 E-value=0.00031 Score=76.02 Aligned_cols=73 Identities=11% Similarity=0.137 Sum_probs=45.5
Q ss_pred cceEeeeCceEEEEEEeCCCcEEEEEEeccC------C---hhhHHHHHHHHHHHH-ccCCCcceeEEEEEEeCCeEEEE
Q 005224 380 STQIGQGGYGKVYKGILPDGTVVAVKRAQEG------S---LQGEKEFLTEIQFLS-RLHHRNLVSLVGYCDEEGEQMLV 449 (707)
Q Consensus 380 ~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~------~---~~~~~~~~~E~~~l~-~l~H~nIv~l~~~~~~~~~~~lV 449 (707)
.+.||.|..+.||++.. +++.++||..... . ......+..|+..+. ......+.+++.+. .+..++|
T Consensus 39 i~~l~~G~~n~vyrv~~-~~~~~vvK~~~p~~~~~~~~~~~~~~~~~~E~e~l~~~~~~~~~~vP~v~~~~--~~~~~lv 115 (420)
T 2pyw_A 39 IKEVGDGNLNFVFIVVG-SSGSLVIKQALPYIRCIGESWPMTKERAYFEATTLRKHGNLSPDHVPEVYHFD--RTMALIG 115 (420)
T ss_dssp EEECCCSSSCEEEEEEC-SSCEEEEEECCSBCTTTCTTSBCCTTHHHHHHHHHHHHHHHSGGGSCCEEEEE--TTTTEEE
T ss_pred EEEccCCCcEEEEEEEc-CCceEEEEECchhhcccCcccccchhHHHHHHHHHHHHHhhCCCCCCeEEEEC--CCccEEE
Confidence 56789999999999965 5678999943211 0 012223444443332 22234566777665 5677999
Q ss_pred EecC-CC
Q 005224 450 YEFM-SN 455 (707)
Q Consensus 450 ~E~~-~~ 455 (707)
|||+ ++
T Consensus 116 ~e~l~~g 122 (420)
T 2pyw_A 116 MRYLEPP 122 (420)
T ss_dssp ECCCCTT
T ss_pred EeecCCc
Confidence 9999 76
No 424
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=97.32 E-value=0.00061 Score=71.08 Aligned_cols=141 Identities=14% Similarity=0.125 Sum_probs=73.7
Q ss_pred cceEeeeCceE-EEEEEeCCCcEEEEEEeccCChhhHHHHHHHHHHHHccCC--CcceeEEEEEEeCCeEEEEEecCCCC
Q 005224 380 STQIGQGGYGK-VYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHH--RNLVSLVGYCDEEGEQMLVYEFMSNG 456 (707)
Q Consensus 380 ~~~lG~G~~g~-Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H--~nIv~l~~~~~~~~~~~lV~E~~~~g 456 (707)
.+.|+.|+... +|+....+|+.+++|....... ..+..|+.+++.+.. -.+.+++.+....+ ++|||++.+.
T Consensus 23 ~~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~~---~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~g--~ll~e~l~~~ 97 (333)
T 3csv_A 23 RTPLAGDASSRRYQRLRSPTGAKAVLMDWSPEEG---GDTQPFVDLAQYLRNLDISAPEIYAEEHARG--LLLIEDLGDA 97 (333)
T ss_dssp ECC--------CCEEEECTTCCEEEEEECCTTTT---CCSHHHHHHHHHHHHTTCBCCCEEEEETTTT--EEEECCCCSC
T ss_pred eeECCCCCCCceEEEEEcCCCCeEEEEECCCCCC---ccccHHHHHHHHHHhCCCCCCceeeecCCCC--EEEEeeCCCc
Confidence 34566565544 6677654467777886554221 234456677666632 23556666643333 7899999877
Q ss_pred CHHHHHhhc---------------------CC---CCcCHHHHH--------HH------------HHHHHHHHHHHH--
Q 005224 457 TLRDQLSAK---------------------SK---EPLGFAMRL--------SI------------ALGSSRGILYLH-- 490 (707)
Q Consensus 457 sL~~~l~~~---------------------~~---~~l~~~~~~--------~i------------~~~ia~gL~yLH-- 490 (707)
++.+++... .. ..++..... .+ ...+...++.+.
T Consensus 98 ~l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~ 177 (333)
T 3csv_A 98 LFTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSA 177 (333)
T ss_dssp BHHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHHH
T ss_pred chHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHh
Confidence 775544211 00 111111100 00 001112222221
Q ss_pred -hCCCCCeEecCCCCCCEEEcCC----CcEEEeeeccccc
Q 005224 491 -TEADPPVFHRDIKASNILLDHK----FTAKVADFGLSRL 525 (707)
Q Consensus 491 -~~~~~~ivH~Dlkp~NILl~~~----~~~kl~DFGla~~ 525 (707)
....+.++|+|+.+.||+++.+ +.+.|+||+.+..
T Consensus 178 ~~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~ 217 (333)
T 3csv_A 178 QLEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL 217 (333)
T ss_dssp HCCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred cccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence 1123459999999999999875 6899999998864
No 425
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.19 E-value=0.0005 Score=61.10 Aligned_cols=57 Identities=25% Similarity=0.370 Sum_probs=39.6
Q ss_pred cEEeccCCcCc-ccCCCcccccCccEEEccCccCCCCCCcccCCCcccceEeccCcccc
Q 005224 28 GYLDLSSNQLN-GSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLS 85 (707)
Q Consensus 28 ~~L~Ls~N~l~-g~ip~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~ 85 (707)
..++.+++.|+ ..+|..+.. +|+.|+|++|+|+...+..|..+++|+.|+|++|.+.
T Consensus 11 ~~v~Cs~~~L~~~~vP~~lp~-~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 11 TLVDCGRRGLTWASLPTAFPV-DTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp TEEECCSSCCCTTTSCSCCCT-TCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred CEEEeCCCCCccccCCCCCCc-CCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 36777777775 466665443 6778888888887555556777777888888887664
No 426
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.18 E-value=0.0016 Score=67.41 Aligned_cols=157 Identities=13% Similarity=0.123 Sum_probs=86.7
Q ss_pred ccHHHHHHHhcCCCc-----cceEeeeCceEEEEEEeCCCcEEEEEEeccCChhhHHHHHHHHHHHHccCCCc--ceeEE
Q 005224 365 FTYGEMALATNNFNS-----STQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRN--LVSLV 437 (707)
Q Consensus 365 ~~~~~l~~~~~~~~~-----~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~n--Iv~l~ 437 (707)
++.+++.....+|.. .+.|+.|....+|+....+| .+++|+..... ....+..|+.+++.+.... +.+++
T Consensus 7 ~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~--~~~~l~~e~~~l~~L~~~g~~vP~~~ 83 (322)
T 2ppq_A 7 ITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKRV--EKNDLPFFLGLMQHLAAKGLSCPLPL 83 (322)
T ss_dssp CCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCBC
T ss_pred CCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCCC--CHHHHHHHHHHHHHHHHCCCCCCccc
Confidence 444555555555654 34566788899999987666 57789876521 1234566777777663211 22222
Q ss_pred EE------EEeCCeEEEEEecCCCCCHH-----H---------HHhhcC----CC---C---cCHHHHHH----------
Q 005224 438 GY------CDEEGEQMLVYEFMSNGTLR-----D---------QLSAKS----KE---P---LGFAMRLS---------- 477 (707)
Q Consensus 438 ~~------~~~~~~~~lV~E~~~~gsL~-----~---------~l~~~~----~~---~---l~~~~~~~---------- 477 (707)
.. ....+..++||+|++|..+. . .++... .. . ..|.....
T Consensus 84 ~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~ 163 (322)
T 2ppq_A 84 PRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVE 163 (322)
T ss_dssp CBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTS
T ss_pred CCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhh
Confidence 11 12346678999999876431 1 112110 00 0 11222110
Q ss_pred --HHHHHHHHHHHHHhC----CCCCeEecCCCCCCEEEcCCCcEEEeeecccc
Q 005224 478 --IALGSSRGILYLHTE----ADPPVFHRDIKASNILLDHKFTAKVADFGLSR 524 (707)
Q Consensus 478 --i~~~ia~gL~yLH~~----~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~ 524 (707)
+...+.+.++++++. ....++|+|+.+.|||++++..+.|+||+.+.
T Consensus 164 ~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 164 KGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp TTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred hhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 001134455555532 12349999999999999987666899998765
No 427
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=97.03 E-value=0.0054 Score=63.53 Aligned_cols=142 Identities=17% Similarity=0.173 Sum_probs=82.0
Q ss_pred cceEeeeCceEEEEEEeCCCcEEEEEEeccCChhhHHHHHHHHHHHHccCCC--cceeEEEE-----EEeCCeEEEEEec
Q 005224 380 STQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHR--NLVSLVGY-----CDEEGEQMLVYEF 452 (707)
Q Consensus 380 ~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~--nIv~l~~~-----~~~~~~~~lV~E~ 452 (707)
...++ |....||+....+|+.+++|+..... .....+..|..+++.+... .+.+++.. ....+..++||||
T Consensus 31 ~~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~-~~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~ 108 (328)
T 1zyl_A 31 LTPLN-SYENRVYQFQDEDRRRFVVKFYRPER-WTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPS 108 (328)
T ss_dssp CEEEC-CSSSEEEEECCTTCCCEEEEEECTTT-SCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEEC
T ss_pred EEeec-CcccceEEEEcCCCCEEEEEEcCCCC-CCHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEEe
Confidence 34577 88889999887778789999986432 2345677788888777421 23334332 2235667899999
Q ss_pred CCCCCHH-----H------H---Hhh--c--C---CCCcCHHHH----HHH---------------HHHHHHHHHHHHhC
Q 005224 453 MSNGTLR-----D------Q---LSA--K--S---KEPLGFAMR----LSI---------------ALGSSRGILYLHTE 492 (707)
Q Consensus 453 ~~~gsL~-----~------~---l~~--~--~---~~~l~~~~~----~~i---------------~~~ia~gL~yLH~~ 492 (707)
++|.++. . . ++. . . ....++... ..+ ...+.+.++.+...
T Consensus 109 i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 188 (328)
T 1zyl_A 109 VGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAH 188 (328)
T ss_dssp CCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 9875431 1 1 111 0 0 111222211 001 00111223333221
Q ss_pred ----CCCCeEecCCCCCCEEEcCCCcEEEeeeccccc
Q 005224 493 ----ADPPVFHRDIKASNILLDHKFTAKVADFGLSRL 525 (707)
Q Consensus 493 ----~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~ 525 (707)
....++|+|+++.||+++ + .+.|+||+.+..
T Consensus 189 ~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 189 WREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp CCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred hhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 233488999999999999 4 899999987753
No 428
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=96.92 E-value=0.0021 Score=65.94 Aligned_cols=71 Identities=8% Similarity=0.073 Sum_probs=44.2
Q ss_pred cceEeeeCceEEEEEEeCCCcEEEEEEeccCChhhHHHHHHHHHHHHccCCCcc-eeEEEEEEeCCeEEEEEecC-CCCC
Q 005224 380 STQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNL-VSLVGYCDEEGEQMLVYEFM-SNGT 457 (707)
Q Consensus 380 ~~~lG~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~nI-v~l~~~~~~~~~~~lV~E~~-~~gs 457 (707)
.+.|+.|....+|+. +.+++|+....... .....+|+.+++.+....+ .++++++ .+.-++|+||+ ++.+
T Consensus 23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~-~~~r~~E~~~l~~l~~~g~~P~~~~~~--~~~~~~v~e~i~~g~~ 94 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA-----GDLCLRIPGKGTEE-YINRANEAVAAREAAKAGVSPEVLHVD--PATGVMVTRYIAGAQT 94 (301)
T ss_dssp CEEEESCSSEEEEEE-----TTEEEEEECC-----CCCHHHHHHHHHHHHHTTSSCCEEEEC--TTTCCEEEECCTTCEE
T ss_pred eeEcCCcccccccee-----eeEEEECCCCCccc-eeCHHHHHHHHHHHHHcCCCCceEEEE--CCCCEEEEeecCCCcc
Confidence 678999999999998 45888887643211 1123467777777642222 3555443 33457899999 6544
Q ss_pred H
Q 005224 458 L 458 (707)
Q Consensus 458 L 458 (707)
+
T Consensus 95 l 95 (301)
T 3dxq_A 95 M 95 (301)
T ss_dssp C
T ss_pred C
Confidence 4
No 429
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.85 E-value=0.0022 Score=69.36 Aligned_cols=73 Identities=18% Similarity=0.214 Sum_probs=50.2
Q ss_pred cceEeeeCceEEEEEEeCC--------CcEEEEEEeccCChhhHHHHHHHHHHHHccCCCcc-eeEEEEEEeCCeEEEEE
Q 005224 380 STQIGQGGYGKVYKGILPD--------GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNL-VSLVGYCDEEGEQMLVY 450 (707)
Q Consensus 380 ~~~lG~G~~g~Vy~~~~~~--------~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~nI-v~l~~~~~~~~~~~lV~ 450 (707)
.+.|+.|....||+....+ ++.+++|+..... ....+.+|..+++.+...++ .++++.+.. .+|+
T Consensus 78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~--~~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v~ 151 (429)
T 1nw1_A 78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPE--TESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLE 151 (429)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCC--CHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEE
T ss_pred EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCC--cHHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEEE
Confidence 4678889899999998753 5789999884321 12455679999888843333 567766532 3899
Q ss_pred ecCCCCCH
Q 005224 451 EFMSNGTL 458 (707)
Q Consensus 451 E~~~~gsL 458 (707)
||++|.++
T Consensus 152 e~l~G~~l 159 (429)
T 1nw1_A 152 EYIPSRPL 159 (429)
T ss_dssp CCCCEEEC
T ss_pred EEeCCccc
Confidence 99986443
No 430
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.83 E-value=0.0022 Score=68.03 Aligned_cols=140 Identities=18% Similarity=0.182 Sum_probs=81.7
Q ss_pred cceEeeeCceEEEEEEeC--------CCcEEEEEEeccCChhhHHHHHHHHHHHHccC-CCcceeEEEEEEeCCeEEEEE
Q 005224 380 STQIGQGGYGKVYKGILP--------DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLH-HRNLVSLVGYCDEEGEQMLVY 450 (707)
Q Consensus 380 ~~~lG~G~~g~Vy~~~~~--------~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~lV~ 450 (707)
.+.|..|-...+|+.... +++.+++|+.... ........+|.++++.+. +.-..++++++.. .+||
T Consensus 55 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~-~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~ 129 (379)
T 3feg_A 55 VYPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI-LQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLE 129 (379)
T ss_dssp CEEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEE
T ss_pred EEEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc-cchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEE
Confidence 456777888889998864 3478999986432 223456678999998884 3223566666543 2999
Q ss_pred ecCCCCCHHH--------------HH---hhcC---CCCcC--HHHHHHHHHHHH-------------------HHHHHH
Q 005224 451 EFMSNGTLRD--------------QL---SAKS---KEPLG--FAMRLSIALGSS-------------------RGILYL 489 (707)
Q Consensus 451 E~~~~gsL~~--------------~l---~~~~---~~~l~--~~~~~~i~~~ia-------------------~gL~yL 489 (707)
||++|.+|.. .| |... ..... +.++.++..++. +.+..|
T Consensus 130 e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L 209 (379)
T 3feg_A 130 QYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNL 209 (379)
T ss_dssp ECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHH
T ss_pred EEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHH
Confidence 9998765421 11 1111 11122 344444443332 122333
Q ss_pred ----HhC-CCCCeEecCCCCCCEEEcCC----CcEEEeeecccc
Q 005224 490 ----HTE-ADPPVFHRDIKASNILLDHK----FTAKVADFGLSR 524 (707)
Q Consensus 490 ----H~~-~~~~ivH~Dlkp~NILl~~~----~~~kl~DFGla~ 524 (707)
... ....++|+|+.+.||+++.+ +.+.++||..+.
T Consensus 210 ~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~ 253 (379)
T 3feg_A 210 RKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSS 253 (379)
T ss_dssp HHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCE
T ss_pred HHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCC
Confidence 222 23358999999999999876 789999998775
No 431
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=96.67 E-value=0.00031 Score=65.63 Aligned_cols=82 Identities=11% Similarity=0.058 Sum_probs=42.1
Q ss_pred cccEEeccCCcCcccCCCccccc-CccEEEccCcc-CCCCCCcccCCC----cccceEeccCcc-cccCCCCCccccccC
Q 005224 26 NLGYLDLSSNQLNGSIPPGRLSL-NITTIKLSNNK-LTGTIPSNFSGL----PRLQRLFIANNS-LSGSIPSSIWQSRTL 98 (707)
Q Consensus 26 ~L~~L~Ls~N~l~g~ip~~~~~~-~L~~L~Ls~N~-l~~~~p~~~~~l----~~L~~L~ls~N~-l~g~~p~~~~~l~~L 98 (707)
+|+.|||+++.++..=-..+..+ +|+.|+|+++. |+..-=..++.+ ++|++|+|+++. +|. ..+..+..
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD---~Gl~~L~~- 137 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTD---KGIIALHH- 137 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCH---HHHHHGGG-
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCH---HHHHHHhc-
Confidence 57777777776662101112222 67777777763 554333334443 357777777764 552 12222222
Q ss_pred CCCccceEEccCcc
Q 005224 99 NATETFILDFQNNN 112 (707)
Q Consensus 99 ~~~~L~~l~l~~N~ 112 (707)
+++|+.|+|++..
T Consensus 138 -~~~L~~L~L~~c~ 150 (176)
T 3e4g_A 138 -FRNLKYLFLSDLP 150 (176)
T ss_dssp -CTTCCEEEEESCT
T ss_pred -CCCCCEEECCCCC
Confidence 2344577777653
No 432
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.61 E-value=0.014 Score=63.56 Aligned_cols=74 Identities=14% Similarity=-0.006 Sum_probs=48.1
Q ss_pred cceEeeeCceEEEEEEeCC-CcEEEEEEeccCChhhHHHHHHHHHHHHccCCCcc-eeEEEEEEeCCeEEEEEecCCCCC
Q 005224 380 STQIGQGGYGKVYKGILPD-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNL-VSLVGYCDEEGEQMLVYEFMSNGT 457 (707)
Q Consensus 380 ~~~lG~G~~g~Vy~~~~~~-~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~nI-v~l~~~~~~~~~~~lV~E~~~~gs 457 (707)
.+.|+.|-...+|+....+ ++.+++|+....... .-...+|..+++.+...++ .++++++. + .+||||++|.+
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~-~idR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~G~~ 187 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKTDE-IINREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMDGYA 187 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC-CCS-CSCHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCCSEE
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCChhh-hcCHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeCCcc
Confidence 5678889999999999865 578889987542211 1112578888888865444 56777662 2 25999998754
Q ss_pred H
Q 005224 458 L 458 (707)
Q Consensus 458 L 458 (707)
|
T Consensus 188 l 188 (458)
T 2qg7_A 188 L 188 (458)
T ss_dssp C
T ss_pred C
Confidence 4
No 433
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=96.41 E-value=0.011 Score=61.62 Aligned_cols=31 Identities=26% Similarity=0.372 Sum_probs=27.4
Q ss_pred CCeEecCCCCCCEEEcCCCcEEEeeeccccc
Q 005224 495 PPVFHRDIKASNILLDHKFTAKVADFGLSRL 525 (707)
Q Consensus 495 ~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~ 525 (707)
..++|+|+.+.||++++++.+.|+||+.+..
T Consensus 206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~ 236 (339)
T 3i1a_A 206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPML 236 (339)
T ss_dssp CEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred ceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence 4599999999999999888899999987754
No 434
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=96.34 E-value=0.012 Score=62.37 Aligned_cols=119 Identities=15% Similarity=0.157 Sum_probs=66.1
Q ss_pred CceEEEeeCCcCCCCCC-CcCCCCcccEEeccCCcCcccCCCccccc--CccEEEccCccCCCCCCcccCCCcccceEec
Q 005224 3 KLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQLNGSIPPGRLSL--NITTIKLSNNKLTGTIPSNFSGLPRLQRLFI 79 (707)
Q Consensus 3 ~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~--~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 79 (707)
+|+.+.+..+ ++.+.. .|.++..|+.+.+..+ ++ .|....+.. +|+.+.+..+ ++..-...|.++++|+.+.+
T Consensus 218 ~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~-~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l 293 (379)
T 4h09_A 218 NLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VT-SIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVM 293 (379)
T ss_dssp SCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CC-EECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEE
T ss_pred ccceeeeccc-eeEEccccccCCccceEEEcCCC-cc-EeCccccceeehhcccccccc-ceeccccccccccccccccc
Confidence 3444444332 333333 4666667777777655 55 566555543 5677766543 44344456777777777777
Q ss_pred cCcccccCCCCCccccccCCCCccceEEccCccCCCCCCCC--CCCCCceeecc
Q 005224 80 ANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSF--NIPPNVTVRLR 131 (707)
Q Consensus 80 s~N~l~g~~p~~~~~l~~L~~~~L~~l~l~~N~l~~~~~~~--~~~~l~~l~l~ 131 (707)
.+|.++..-..+|.++.+|+ .++|.+| ++.+.... .+.+|..+.+.
T Consensus 294 ~~~~i~~I~~~aF~~c~~L~-----~i~lp~~-l~~I~~~aF~~C~~L~~i~ip 341 (379)
T 4h09_A 294 DNSAIETLEPRVFMDCVKLS-----SVTLPTA-LKTIQVYAFKNCKALSTISYP 341 (379)
T ss_dssp CCTTCCEECTTTTTTCTTCC-----EEECCTT-CCEECTTTTTTCTTCCCCCCC
T ss_pred cccccceehhhhhcCCCCCC-----EEEcCcc-ccEEHHHHhhCCCCCCEEEEC
Confidence 77766622234455555554 6666543 66554432 55666665554
No 435
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=96.33 E-value=0.00075 Score=63.01 Aligned_cols=92 Identities=13% Similarity=0.214 Sum_probs=63.7
Q ss_pred cCCCccc-ccCccEEEccCccCCCCCCcccCCCcccceEeccCcc-cccCCCCCccccccCC--CCccceEEccCc-cCC
Q 005224 40 SIPPGRL-SLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNS-LSGSIPSSIWQSRTLN--ATETFILDFQNN-NLT 114 (707)
Q Consensus 40 ~ip~~~~-~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~-l~g~~p~~~~~l~~L~--~~~L~~l~l~~N-~l~ 114 (707)
.+|.... ...|+.|||+++.|+..--..+.++++|+.|+|+++. ++. ..+..+..+. .++|+.|+|+++ ++|
T Consensus 52 ~LP~~~~~~~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD---~gL~~L~~~~~~~~~L~~L~Ls~C~~IT 128 (176)
T 3e4g_A 52 HLPTGPLDKYKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIED---GCLERLSQLENLQKSMLEMEIISCGNVT 128 (176)
T ss_dssp GSCCCSTTCCCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCH---HHHHHHHTCHHHHHHCCEEEEESCTTCC
T ss_pred cCCcccCCCceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCH---HHHHHHHhcccccCCCCEEEcCCCCcCC
Confidence 4455432 2389999999999987666678899999999999995 662 2233333220 124669999997 477
Q ss_pred CC--CCCCCCCCCceeeccCCC
Q 005224 115 NI--SGSFNIPPNVTVRLRGNP 134 (707)
Q Consensus 115 ~~--~~~~~~~~l~~l~l~~N~ 134 (707)
.- ..-..+++|+.|++++.+
T Consensus 129 D~Gl~~L~~~~~L~~L~L~~c~ 150 (176)
T 3e4g_A 129 DKGIIALHHFRNLKYLFLSDLP 150 (176)
T ss_dssp HHHHHHGGGCTTCCEEEEESCT
T ss_pred HHHHHHHhcCCCCCEEECCCCC
Confidence 52 211268999999998765
No 436
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.33 E-value=0.0037 Score=66.10 Aligned_cols=73 Identities=12% Similarity=0.065 Sum_probs=43.9
Q ss_pred cceEeeeCceEEEEEEeCC---------CcEEEEEEeccCChhhHHHHHHHHHHHHccCCCc-ceeEEEEEEeCCeEEEE
Q 005224 380 STQIGQGGYGKVYKGILPD---------GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRN-LVSLVGYCDEEGEQMLV 449 (707)
Q Consensus 380 ~~~lG~G~~g~Vy~~~~~~---------~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~n-Iv~l~~~~~~~~~~~lV 449 (707)
.+.|+.|....+|+....+ ++.+++|+...... .......|.++++.+...+ +.++++.. . -++|
T Consensus 38 ~~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~-~~~~~~~E~~~l~~L~~~g~~P~~~~~~--~--~~~v 112 (369)
T 3c5i_A 38 VKQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVD-ELYNTISEFEVYKTMSKYKIAPQLLNTF--N--GGRI 112 (369)
T ss_dssp EEEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGG-GTSCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEEE
T ss_pred EEEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCcc-ceecHHHHHHHHHHHHhcCCCCceEEec--C--CcEE
Confidence 4567788888999998754 26788888754321 1112356888888774333 34666544 2 3689
Q ss_pred EecCCCCC
Q 005224 450 YEFMSNGT 457 (707)
Q Consensus 450 ~E~~~~gs 457 (707)
|||++|.+
T Consensus 113 ~e~i~G~~ 120 (369)
T 3c5i_A 113 EEWLYGDP 120 (369)
T ss_dssp EECCCSEE
T ss_pred EEEecCCc
Confidence 99998754
No 437
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=96.31 E-value=0.0062 Score=65.02 Aligned_cols=106 Identities=17% Similarity=0.231 Sum_probs=71.0
Q ss_pred CcCCCCcccEEeccCCcCcccCCCccccc--CccEEEccCccCCCCCCcccCCCcccceEeccCcccccCCCCCcccccc
Q 005224 20 DLSRIPNLGYLDLSSNQLNGSIPPGRLSL--NITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRT 97 (707)
Q Consensus 20 ~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~--~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~ 97 (707)
.|.++.+|+.+.+.++. . .|....+.. +|+.+.+. +.++..-..+|.++.+|+.++|.+| ++..-..+|.++.+
T Consensus 260 aF~~c~~L~~i~lp~~~-~-~I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~ 335 (394)
T 4gt6_A 260 AFDSCAYLASVKMPDSV-V-SIGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQ 335 (394)
T ss_dssp TTTTCSSCCEEECCTTC-C-EECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTT
T ss_pred eeeecccccEEeccccc-c-eecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCC
Confidence 57778888888886554 3 466655543 68888885 4566455567888888888888765 55223455666666
Q ss_pred CCCCccceEEccCccCCCCCCCC--CCCCCceeeccCCCc
Q 005224 98 LNATETFILDFQNNNLTNISGSF--NIPPNVTVRLRGNPF 135 (707)
Q Consensus 98 L~~~~L~~l~l~~N~l~~~~~~~--~~~~l~~l~l~~N~~ 135 (707)
|+ .+.|.++ ++.+.... .+.+|..+.+.+|..
T Consensus 336 L~-----~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~ 369 (394)
T 4gt6_A 336 LE-----RIAIPSS-VTKIPESAFSNCTALNNIEYSGSRS 369 (394)
T ss_dssp CC-----EEEECTT-CCBCCGGGGTTCTTCCEEEESSCHH
T ss_pred CC-----EEEECcc-cCEEhHhHhhCCCCCCEEEECCcee
Confidence 65 7777544 77775543 678888888887764
No 438
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=96.28 E-value=0.0064 Score=64.90 Aligned_cols=42 Identities=7% Similarity=0.198 Sum_probs=20.3
Q ss_pred CCceEEEeeCCcCCCCCC-CcCCCCcccEEeccCCcCcccCCCccc
Q 005224 2 SKLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQLNGSIPPGRL 46 (707)
Q Consensus 2 ~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~g~ip~~~~ 46 (707)
++|+.+.|.. .++.+.. +|.++++|+.++|.+| ++ .|+...+
T Consensus 71 ~~L~~i~lp~-~i~~I~~~aF~~c~~L~~i~lp~~-l~-~I~~~aF 113 (394)
T 4fs7_A 71 RKVTEIKIPS-TVREIGEFAFENCSKLEIINIPDS-VK-MIGRCTF 113 (394)
T ss_dssp TTEEEEECCT-TCCEECTTTTTTCTTCCEECCCTT-CC-EECTTTT
T ss_pred CCceEEEeCC-CccCcchhHhhCCCCCcEEEeCCC-ce-Eccchhh
Confidence 3455555542 2444433 4555555555555433 44 4444433
No 439
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.10 E-value=0.00036 Score=66.47 Aligned_cols=37 Identities=22% Similarity=0.328 Sum_probs=19.6
Q ss_pred CccEEEccCccCCCCCC----cccCCCcccceEeccCcccc
Q 005224 49 NITTIKLSNNKLTGTIP----SNFSGLPRLQRLFIANNSLS 85 (707)
Q Consensus 49 ~L~~L~Ls~N~l~~~~p----~~~~~l~~L~~L~ls~N~l~ 85 (707)
.|+.|+|++|+|...-- ..+..=+.|+.|+|++|+|.
T Consensus 71 ~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig 111 (197)
T 1pgv_A 71 HIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLT 111 (197)
T ss_dssp CCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCC
T ss_pred CcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCC
Confidence 46666666666653221 22223345666666666665
No 440
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=95.98 E-value=0.012 Score=62.33 Aligned_cols=104 Identities=16% Similarity=0.239 Sum_probs=79.7
Q ss_pred CCceEEEeeCCcCCCCCC-CcCCCCcccEEeccCCcCcccCCCccccc--CccEEEccCccCCCCCCcccCCCcccceEe
Q 005224 2 SKLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQLNGSIPPGRLSL--NITTIKLSNNKLTGTIPSNFSGLPRLQRLF 78 (707)
Q Consensus 2 ~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~--~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 78 (707)
.+|+.+.+..+ ++.+.. .|.++.+|+.+.+..+ ++ .++...+.. +|+.+.+.+|.++..-..+|.++.+|+.+.
T Consensus 240 ~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~-~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~ 316 (379)
T 4h09_A 240 KALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VK-TVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVT 316 (379)
T ss_dssp SSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CS-EECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEE
T ss_pred ccceEEEcCCC-ccEeCccccceeehhcccccccc-ce-eccccccccccccccccccccccceehhhhhcCCCCCCEEE
Confidence 56888888765 666655 6899999999999754 77 888877764 899999999999966678899999999999
Q ss_pred ccCcccccCC-CCCccccccCCCCccceEEccCccCCCC
Q 005224 79 IANNSLSGSI-PSSIWQSRTLNATETFILDFQNNNLTNI 116 (707)
Q Consensus 79 ls~N~l~g~~-p~~~~~l~~L~~~~L~~l~l~~N~l~~~ 116 (707)
|.++ ++ .| ..+|.++.+|+ .+.+..| ++.+
T Consensus 317 lp~~-l~-~I~~~aF~~C~~L~-----~i~ip~~-v~~I 347 (379)
T 4h09_A 317 LPTA-LK-TIQVYAFKNCKALS-----TISYPKS-ITLI 347 (379)
T ss_dssp CCTT-CC-EECTTTTTTCTTCC-----CCCCCTT-CCEE
T ss_pred cCcc-cc-EEHHHHhhCCCCCC-----EEEECCc-cCEE
Confidence 9866 66 44 45677777776 5555433 4443
No 441
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=95.97 E-value=0.017 Score=61.47 Aligned_cols=75 Identities=17% Similarity=0.171 Sum_probs=46.0
Q ss_pred CccEEEccCccCCCCCCcccCCCcccceEeccCcccccCC-CCCccccccCCCCccceEEccCccCCCCCCCC--CCCCC
Q 005224 49 NITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSI-PSSIWQSRTLNATETFILDFQNNNLTNISGSF--NIPPN 125 (707)
Q Consensus 49 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~-p~~~~~l~~L~~~~L~~l~l~~N~l~~~~~~~--~~~~l 125 (707)
+|+.+.+.+| ++..-..+|.++.+|+.++|.++ ++ .| ..+|.++.+|+ .+++..| ++.+.... .+++|
T Consensus 298 ~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~-~I~~~aF~~c~~L~-----~i~lp~~-l~~I~~~aF~~C~~L 368 (394)
T 4fs7_A 298 SLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VE-EIGKRSFRGCTSLS-----NINFPLS-LRKIGANAFQGCINL 368 (394)
T ss_dssp TCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CC-EECTTTTTTCTTCC-----EECCCTT-CCEECTTTBTTCTTC
T ss_pred cccccccccc-cceechhhhcCCCCCCEEEeCCc-cc-EEhHHhccCCCCCC-----EEEECcc-ccEehHHHhhCCCCC
Confidence 5777777554 55344566777777777777644 55 33 34555655554 6777655 66665443 66777
Q ss_pred ceeeccC
Q 005224 126 VTVRLRG 132 (707)
Q Consensus 126 ~~l~l~~ 132 (707)
+.+.+..
T Consensus 369 ~~i~lp~ 375 (394)
T 4fs7_A 369 KKVELPK 375 (394)
T ss_dssp CEEEEEG
T ss_pred CEEEECC
Confidence 7776644
No 442
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=95.79 E-value=0.0095 Score=63.51 Aligned_cols=122 Identities=14% Similarity=0.285 Sum_probs=83.6
Q ss_pred CCceEEEeeCCcCCCCCC-CcCCCCcccEEeccCCcCcccCCCccccc--CccEEEccCccCCCCCCcccCCCcccceEe
Q 005224 2 SKLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQLNGSIPPGRLSL--NITTIKLSNNKLTGTIPSNFSGLPRLQRLF 78 (707)
Q Consensus 2 ~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~--~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 78 (707)
.+|+.+.+.++-.+ +.. .|.++++|+.+.+. +.++ .|+...|.. +|+.++|..| ++..-..+|.+|.+|+.+.
T Consensus 265 ~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~-~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ 340 (394)
T 4gt6_A 265 AYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRIT-ELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIA 340 (394)
T ss_dssp SSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCC-EECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEE
T ss_pred ccccEEecccccce-ecCcccccccccccccCC-Cccc-ccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEE
Confidence 56888888765443 444 69999999999996 6688 899888764 8999999865 7756677899999999999
Q ss_pred ccCcccccCCC-CCccccccCCCCccceEEccCccCCCCCCCCCCCCCceeeccCCCc
Q 005224 79 IANNSLSGSIP-SSIWQSRTLNATETFILDFQNNNLTNISGSFNIPPNVTVRLRGNPF 135 (707)
Q Consensus 79 ls~N~l~g~~p-~~~~~l~~L~~~~L~~l~l~~N~l~~~~~~~~~~~l~~l~l~~N~~ 135 (707)
|.++ ++ .|. .+|.++.+|+ .+++.+|.... ........|+.+.+..|.+
T Consensus 341 ip~s-v~-~I~~~aF~~C~~L~-----~i~~~~~~~~~-~~~~~~~~L~~i~i~~~~~ 390 (394)
T 4gt6_A 341 IPSS-VT-KIPESAFSNCTALN-----NIEYSGSRSQW-NAISTDSGLQNLPVAPGSI 390 (394)
T ss_dssp ECTT-CC-BCCGGGGTTCTTCC-----EEEESSCHHHH-HTCBCCCCC----------
T ss_pred ECcc-cC-EEhHhHhhCCCCCC-----EEEECCceeeh-hhhhccCCCCEEEeCCCCE
Confidence 9765 66 554 5677777776 89998875432 1122556677777766543
No 443
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=95.78 E-value=0.00092 Score=69.99 Aligned_cols=59 Identities=14% Similarity=0.200 Sum_probs=41.3
Q ss_pred ccCCCCCCCHHHHHHHHHHhhhcCC----CCCCCCCccccCCCCCCCCCCCCCCcCCCCCCCCCC
Q 005224 630 QDETDARPSMSEVMRELESIWNMMP----ESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSSD 690 (707)
Q Consensus 630 ~~~p~~RPt~~~v~~~L~~~~~~~~----~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f~~~ 690 (707)
-..|-...+..+++..+..- ..+ ..++++.+||.+||+.||++|||++|+|+||||...
T Consensus 221 G~~PF~~~~~~~~~~~i~~~--~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~hp~~~~~ 283 (350)
T 4b9d_A 221 LKHAFEAGSMKNLVLKIISG--SFPPVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILEKGFIAKR 283 (350)
T ss_dssp SSCSCCCSSHHHHHHHHHHT--CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSHHHHTT
T ss_pred CCCCCCCcCHHHHHHHHHcC--CCCCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcCHHhhcC
Confidence 44555555666665544322 222 223445789999999999999999999999999754
No 444
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=95.46 E-value=0.034 Score=59.11 Aligned_cols=141 Identities=16% Similarity=0.137 Sum_probs=81.6
Q ss_pred cceEeeeCceEEEEEEeCC--------CcEEEEEEeccCCh-----------hhH-------HHHHHHHHHHHccC-CCc
Q 005224 380 STQIGQGGYGKVYKGILPD--------GTVVAVKRAQEGSL-----------QGE-------KEFLTEIQFLSRLH-HRN 432 (707)
Q Consensus 380 ~~~lG~G~~g~Vy~~~~~~--------~~~vavK~l~~~~~-----------~~~-------~~~~~E~~~l~~l~-H~n 432 (707)
.+.|..|-...+|+...++ ++.|.+++.-.... .++ +....|..+++.+. +--
T Consensus 57 v~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi 136 (401)
T 3f2s_A 57 ISVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSL 136 (401)
T ss_dssp EEEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTS
T ss_pred EEEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCC
Confidence 4567668888999988753 36788887644221 011 12335888888884 333
Q ss_pred ceeEEEEEEeCCeEEEEEecCCCCCHHH--------------HH---hhcC---CCCcC--HHHHHHHHHHHH-------
Q 005224 433 LVSLVGYCDEEGEQMLVYEFMSNGTLRD--------------QL---SAKS---KEPLG--FAMRLSIALGSS------- 483 (707)
Q Consensus 433 Iv~l~~~~~~~~~~~lV~E~~~~gsL~~--------------~l---~~~~---~~~l~--~~~~~~i~~~ia------- 483 (707)
..++++++.. . +|+||+++-+|.. .+ |... ..... +....++..++.
T Consensus 137 ~Pkl~~~~~~--G--~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~ 212 (401)
T 3f2s_A 137 GPKLYGIFPQ--G--RLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEE 212 (401)
T ss_dssp SCCEEEEETT--E--EEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSH
T ss_pred CCeEEEEeCC--C--eEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcch
Confidence 5567777642 2 8999998755421 11 1110 11122 223333332221
Q ss_pred ---------------HHH----HHHHhCC-CCCeEecCCCCCCEEEcCC------CcEEEeeecccc
Q 005224 484 ---------------RGI----LYLHTEA-DPPVFHRDIKASNILLDHK------FTAKVADFGLSR 524 (707)
Q Consensus 484 ---------------~gL----~yLH~~~-~~~ivH~Dlkp~NILl~~~------~~~kl~DFGla~ 524 (707)
+-+ .+|...+ ...++|+|+.+.||+++++ +.+.++||..|.
T Consensus 213 ~~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~ 279 (401)
T 3f2s_A 213 SRIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCE
T ss_pred hhhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCC
Confidence 112 2233322 3348999999999999887 789999998774
No 445
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=95.42 E-value=0.002 Score=64.96 Aligned_cols=63 Identities=13% Similarity=0.268 Sum_probs=44.7
Q ss_pred ccCCCCCCCHHHHHHHHHHhhhcCCC-CCCCCCccccCCCCCCCCCCCCCCcCCCCCCCCCCCC
Q 005224 630 QDETDARPSMSEVMRELESIWNMMPE-SDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSSDVS 692 (707)
Q Consensus 630 ~~~p~~RPt~~~v~~~L~~~~~~~~~-~~~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f~~~~~ 692 (707)
...|-...+..+..+.+.......+. ......+||.+||..||++|||++|+|+||||.....
T Consensus 203 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h~~~~~~~~ 266 (279)
T 3fdn_A 203 GKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSS 266 (279)
T ss_dssp SSCTTCCSSHHHHHHHHHHTCCCCCTTSCHHHHHHHHHHCCSSGGGSCCHHHHHHCHHHHHHCS
T ss_pred CCCCCCCCcHHHHHHHHHhCCCCCCCcCCHHHHHHHHHHhccChhhCCCHHHHhhCccccCCcc
Confidence 34455555666666666554433333 2334567999999999999999999999999976543
No 446
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=95.27 E-value=0.11 Score=49.81 Aligned_cols=103 Identities=15% Similarity=0.135 Sum_probs=66.9
Q ss_pred CCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCCCcc
Q 005224 456 GTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIV 535 (707)
Q Consensus 456 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 535 (707)
-+|.++|... ..++++.++|.++.|.+.+|.-+-....+ ..+=+.|..|++..+|.|...+ +.+.
T Consensus 33 vSL~eIL~~~-~~PlsEEqaWALc~Qc~~~L~~~~~~~~~--~~~i~~~~~i~l~~dG~V~f~~-~~s~----------- 97 (229)
T 2yle_A 33 LSLEEILRLY-NQPINEEQAWAVCYQCCGSLRAAARRRQP--RHRVRSAAQIRVWRDGAVTLAP-AADD----------- 97 (229)
T ss_dssp EEHHHHHHHH-TSCCCHHHHHHHHHHHHHHHHHHHHTTCC--CCCCCSGGGEEEETTSCEEECC-C--------------
T ss_pred ccHHHHHHHc-CCCcCHHHHHHHHHHHHHHHHhhhhcccC--CceecCCcceEEecCCceeccc-cccc-----------
Confidence 4799999765 45799999999999999988776221111 1233456899999999988764 2111
Q ss_pred ccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCC
Q 005224 536 PAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQP 582 (707)
Q Consensus 536 ~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~elltG~~p 582 (707)
.....+.|||... ...+.+.=|||+|+++|.-+--..|
T Consensus 98 --------~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~ 135 (229)
T 2yle_A 98 --------AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLK 135 (229)
T ss_dssp -----------------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCC
T ss_pred --------ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCC
Confidence 0123466888763 3456788999999999998864343
No 447
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=95.25 E-value=0.0057 Score=40.82 Aligned_cols=30 Identities=20% Similarity=0.491 Sum_probs=21.4
Q ss_pred CCCCcccceeeeehhHHHHHHHHHHHHHhh
Q 005224 305 NSGISKAALAGIILGAIAGAVTISAIVSLL 334 (707)
Q Consensus 305 ~~~~~~~~~~~ii~g~~~~~~~~~~~~~~~ 334 (707)
+++.+.+++++|++|+++++.++.+++.++
T Consensus 5 ~~~ls~GaIAGiVvG~v~gv~li~~l~~~~ 34 (38)
T 2k1k_A 5 SRGLTGGEIVAVIFGLLLGAALLLGILVFR 34 (38)
T ss_dssp STTCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCceeeeehHHHHHHHHHHHHHHHH
Confidence 445678889999999888777665554443
No 448
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=94.90 E-value=0.0016 Score=65.49 Aligned_cols=63 Identities=6% Similarity=0.106 Sum_probs=42.8
Q ss_pred ccCCCCCCCHHHHHHHHHHhhhcCCC-CCCCCCccccCCCCCCCCCCCCCCcCCCCCCCCCCCC
Q 005224 630 QDETDARPSMSEVMRELESIWNMMPE-SDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSSDVS 692 (707)
Q Consensus 630 ~~~p~~RPt~~~v~~~L~~~~~~~~~-~~~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f~~~~~ 692 (707)
...|-......++.+.+..-....+. .+....+++.+||..||++|||++|+++||||.....
T Consensus 207 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h~~~~~~~~ 270 (276)
T 2h6d_A 207 GTLPFDDEHVPTLFKKIRGGVFYIPEYLNRSVATLLMHMLQVDPLKRATIKDIREHEWFKQDLP 270 (276)
T ss_dssp SSCSSCCSSHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHSHHHHTTCC
T ss_pred CCCCCCCCcHHHHHHHhhcCcccCchhcCHHHHHHHHHHccCChhhCCCHHHHHhChhhccCch
Confidence 34454445556665554433222222 2334567999999999999999999999999987653
No 449
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=94.29 E-value=0.0064 Score=61.40 Aligned_cols=63 Identities=14% Similarity=0.181 Sum_probs=41.8
Q ss_pred ccCCCCCCCHHHHHHHHHHhhhcCC-CCCCCCCccccCCCCCCCCCCCCCCcCCCCCCCCCCCC
Q 005224 630 QDETDARPSMSEVMRELESIWNMMP-ESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSSDVS 692 (707)
Q Consensus 630 ~~~p~~RPt~~~v~~~L~~~~~~~~-~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f~~~~~ 692 (707)
...|-.-.+..+..+.+......++ ..+....++|.+||..||++|||++|+++||||.....
T Consensus 208 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~h~~~~~~~~ 271 (284)
T 2vgo_A 208 GMPPFDSPSHTETHRRIVNVDLKFPPFLSDGSKDLISKLLRYHPPQRLPLKGVMEHPWVKANSR 271 (284)
T ss_dssp SSCTTCCSSHHHHHHHHHTTCCCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTCHHHHHHCC
T ss_pred CCCCCCCCCHhHHHHHHhccccCCCCcCCHHHHHHHHHHhhcCHhhCCCHHHHhhCHHHHhhcc
Confidence 3445555555555544433222222 22334567999999999999999999999999976443
No 450
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=94.18 E-value=0.19 Score=53.90 Aligned_cols=74 Identities=11% Similarity=0.052 Sum_probs=47.6
Q ss_pred cceEeeeCceEEEEEEeCC--------CcEEEEEEeccCChhhHHHHHHHHHHHHccC-CCcceeEEEEEEeCCeEEEEE
Q 005224 380 STQIGQGGYGKVYKGILPD--------GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLH-HRNLVSLVGYCDEEGEQMLVY 450 (707)
Q Consensus 380 ~~~lG~G~~g~Vy~~~~~~--------~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~lV~ 450 (707)
.+.+..|-...+|+....+ ++.+++|+..... ...-+..+|..+++.+. +.-..++++.+ . -++||
T Consensus 75 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t-~~~idR~~E~~~l~~L~~~gi~P~l~~~~--~--~~~I~ 149 (424)
T 3mes_A 75 VKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHV-GKFYDSKVELDVFRYLSNINIAPNIIADF--P--EGRIE 149 (424)
T ss_dssp EEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC--CCCCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEEEE
T ss_pred EEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCc-chhcCHHHHHHHHHHHHhcCCCCCEEEEc--C--CCEEE
Confidence 4567778888999998753 5789999865432 11112356888887774 22234566543 2 27899
Q ss_pred ecCCCCCH
Q 005224 451 EFMSNGTL 458 (707)
Q Consensus 451 E~~~~gsL 458 (707)
||++|.+|
T Consensus 150 efI~G~~l 157 (424)
T 3mes_A 150 EFIDGEPL 157 (424)
T ss_dssp ECCCSEEC
T ss_pred EEeCCccC
Confidence 99998653
No 451
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=93.96 E-value=0.0059 Score=62.25 Aligned_cols=63 Identities=5% Similarity=0.044 Sum_probs=42.9
Q ss_pred ccCCCCCCCHHHHHHHHHHhhhcCC-CCCCCCCccccCCCCCCCCCCCCCCcCCCCCCCCCCCC
Q 005224 630 QDETDARPSMSEVMRELESIWNMMP-ESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSSDVS 692 (707)
Q Consensus 630 ~~~p~~RPt~~~v~~~L~~~~~~~~-~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f~~~~~ 692 (707)
...|-...+..++.+.+.......+ ...+...+|+.+||..||++|||++|+++||||.....
T Consensus 209 g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~~~~~ 272 (305)
T 2wtk_C 209 GLYPFEGDNIYKLFENIGKGSYAIPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQHSWFRKKHP 272 (305)
T ss_dssp SSCSCCCSSHHHHHHHHHHCCCCCCSSSCHHHHHHHHHHTCSSTTTSCCHHHHHHSHHHHSCCC
T ss_pred CCCCCCCchHHHHHHHHhcCCCCCCCccCHHHHHHHHHHccCChhhCCCHHHHhcCcccccCCC
Confidence 3445554556666555543322222 22334568999999999999999999999999976654
No 452
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=93.94 E-value=0.0063 Score=61.80 Aligned_cols=31 Identities=10% Similarity=0.223 Sum_probs=28.2
Q ss_pred CCccccCCCCCCCCCCCCCCcCCCCCCCCCC
Q 005224 660 TPEFINSEHTSKEETPPSSSSMLKHPYVSSD 690 (707)
Q Consensus 660 ~~dll~~~L~~dP~~R~sa~e~L~Hp~f~~~ 690 (707)
..+++.+||..||++|||++|+|+||||...
T Consensus 260 ~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~ 290 (303)
T 1zy4_A 260 EKKIIRLLIDHDPNKRPGARTLLNSGWLPVK 290 (303)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHSSCSCCC
T ss_pred HHHHHHHHHhcCcccCcCHHHHhCCCCcCCC
Confidence 3579999999999999999999999999754
No 453
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=93.54 E-value=0.0049 Score=63.63 Aligned_cols=28 Identities=4% Similarity=0.238 Sum_probs=23.7
Q ss_pred ccccCCCCCCCCCCCCCCcCCCCCCCCC
Q 005224 662 EFINSEHTSKEETPPSSSSMLKHPYVSS 689 (707)
Q Consensus 662 dll~~~L~~dP~~R~sa~e~L~Hp~f~~ 689 (707)
+|+.+||..||++|||++|+|+||||.+
T Consensus 304 ~li~~~l~~~p~~Rps~~~~l~~~~f~~ 331 (332)
T 3qd2_B 304 MMVQDMLSPSPTERPEATDIIENAIFEN 331 (332)
T ss_dssp HHHHHHHCSSGGGSCCHHHHHHSTTCCC
T ss_pred HHHHHHccCCCCcCCCHHHHhhchhhhc
Confidence 5677788888899999999999999975
No 454
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=93.50 E-value=0.0026 Score=64.40 Aligned_cols=31 Identities=19% Similarity=0.582 Sum_probs=28.2
Q ss_pred ChHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005224 614 PSECVEKFIKLALKCCQDETDARPSMSEVMR 644 (707)
Q Consensus 614 ~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~ 644 (707)
+..++..+.+++.+|++.+|.+||++.++++
T Consensus 236 ~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~ 266 (290)
T 3fme_A 236 ADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 266 (290)
T ss_dssp TTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred cccCCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence 4678899999999999999999999998864
No 455
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=93.42 E-value=0.0027 Score=64.92 Aligned_cols=33 Identities=9% Similarity=0.260 Sum_probs=27.2
Q ss_pred CCccccCCCCCCCCCCCCCCcCCCCCCCCCCCC
Q 005224 660 TPEFINSEHTSKEETPPSSSSMLKHPYVSSDVS 692 (707)
Q Consensus 660 ~~dll~~~L~~dP~~R~sa~e~L~Hp~f~~~~~ 692 (707)
..+|+.+||..||++|||++|+|+||||.....
T Consensus 233 ~~~li~~~l~~dP~~Rps~~e~l~hp~~~~~~~ 265 (299)
T 3m2w_A 233 VKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTK 265 (299)
T ss_dssp HHHHHHHHTCSSTTTSCCHHHHHTSHHHHTGGG
T ss_pred HHHHHHHHcccChhhCCCHHHHhcChhhccccc
Confidence 346788889999999999999999999976543
No 456
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=93.00 E-value=0.0085 Score=56.90 Aligned_cols=84 Identities=13% Similarity=0.182 Sum_probs=48.5
Q ss_pred CccEEEccCc-cCCC----CCCcccCCCcccceEeccCcccccCCCCCccccccCCCCccceEEccCccCCCC-----CC
Q 005224 49 NITTIKLSNN-KLTG----TIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNI-----SG 118 (707)
Q Consensus 49 ~L~~L~Ls~N-~l~~----~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~~~L~~l~l~~N~l~~~-----~~ 118 (707)
.|+.|+|++| +|.. .+-..+..-+.|+.|+|++|+|...--..++..-.- -..|+.|+|++|+|..- -.
T Consensus 42 ~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~-N~tL~~L~L~~N~Ig~~Ga~ala~ 120 (197)
T 1pgv_A 42 DLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIET-SPSLRVLNVESNFLTPELLARLLR 120 (197)
T ss_dssp SCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHH-CSSCCEEECCSSBCCHHHHHHHHH
T ss_pred CccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhc-CCccCeEecCCCcCCHHHHHHHHH
Confidence 5777888775 6652 133445555678888888888873322233322111 13455888888888752 11
Q ss_pred CC-CCCCCceeeccCC
Q 005224 119 SF-NIPPNVTVRLRGN 133 (707)
Q Consensus 119 ~~-~~~~l~~l~l~~N 133 (707)
.+ .-..|+.|+|++|
T Consensus 121 aL~~N~tL~~L~L~n~ 136 (197)
T 1pgv_A 121 STLVTQSIVEFKADNQ 136 (197)
T ss_dssp HTTTTCCCSEEECCCC
T ss_pred HHhhCCceeEEECCCC
Confidence 12 2244777888754
No 457
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=92.88 E-value=0.0096 Score=61.95 Aligned_cols=30 Identities=13% Similarity=0.302 Sum_probs=22.1
Q ss_pred ccccCCCCCCCCCCCCCCcCCCCCCCCCCC
Q 005224 662 EFINSEHTSKEETPPSSSSMLKHPYVSSDV 691 (707)
Q Consensus 662 dll~~~L~~dP~~R~sa~e~L~Hp~f~~~~ 691 (707)
+||.+||..||++|||++|+|+||||....
T Consensus 253 ~li~~~L~~dP~~Rps~~ell~hp~~~~~~ 282 (335)
T 3dls_A 253 SLVSGLLQPVPERRTTLEKLVTDPWVTQPV 282 (335)
T ss_dssp HHHHHHTCSSGGGSCCHHHHHHCTTTTCCC
T ss_pred HHHHHHccCChhhCcCHHHHhcCccccCCc
Confidence 466667777777788888888888886644
No 458
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=92.65 E-value=0.026 Score=57.70 Aligned_cols=34 Identities=21% Similarity=0.446 Sum_probs=30.3
Q ss_pred CCCccccCCCCCCCCCCCCCCcCCCCCCCCCCCC
Q 005224 659 KTPEFINSEHTSKEETPPSSSSMLKHPYVSSDVS 692 (707)
Q Consensus 659 ~~~dll~~~L~~dP~~R~sa~e~L~Hp~f~~~~~ 692 (707)
.+.+++.+||..||++|||++|+|+||||.....
T Consensus 254 ~l~~li~~~l~~dp~~Rpt~~~ll~~~~~~~~~~ 287 (314)
T 3com_A 254 NFTDFVKQCLVKSPEQRATATQLLQHPFVRSAKG 287 (314)
T ss_dssp HHHHHHHHHTCSCTTTSCCHHHHTTSHHHHTCCC
T ss_pred HHHHHHHHHccCChhhCcCHHHHHhCHHHhcCCc
Confidence 4567999999999999999999999999987654
No 459
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=92.54 E-value=0.013 Score=59.17 Aligned_cols=30 Identities=10% Similarity=0.231 Sum_probs=22.9
Q ss_pred ccccCCCCCCCCCCCCCCcCCCCCCCCCCC
Q 005224 662 EFINSEHTSKEETPPSSSSMLKHPYVSSDV 691 (707)
Q Consensus 662 dll~~~L~~dP~~R~sa~e~L~Hp~f~~~~ 691 (707)
+++.+||..||++|||++|+|+||||....
T Consensus 257 ~li~~~l~~dp~~Rps~~~ll~~~~~~~~~ 286 (295)
T 2clq_A 257 AFILKCFEPDPDKRACANDLLVDEFLKVSS 286 (295)
T ss_dssp HHHHHTTCSSTTTSCCHHHHHTSGGGCC--
T ss_pred HHHHHHccCChhhCCCHHHHhcChhhhhcc
Confidence 566777888888888888888899987544
No 460
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=92.42 E-value=0.0032 Score=65.61 Aligned_cols=33 Identities=9% Similarity=0.294 Sum_probs=26.4
Q ss_pred CCccccCCCCCCCCCCCCCCcCCCCCCCCCCCC
Q 005224 660 TPEFINSEHTSKEETPPSSSSMLKHPYVSSDVS 692 (707)
Q Consensus 660 ~~dll~~~L~~dP~~R~sa~e~L~Hp~f~~~~~ 692 (707)
+.+||.+||..||++|||++|+|+||||.....
T Consensus 264 ~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~ 296 (336)
T 3fhr_A 264 AKQLIRLLLKTDPTERLTITQFMNHPWINQSMV 296 (336)
T ss_dssp HHHHHHHHSCSSGGGSCCHHHHHHSHHHHTGGG
T ss_pred HHHHHHHHCCCChhHCcCHHHHhcCcccccccc
Confidence 346788888888999999999999999876543
No 461
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=92.17 E-value=0.024 Score=56.73 Aligned_cols=62 Identities=16% Similarity=0.130 Sum_probs=42.2
Q ss_pred cCCCCCCCHHHHHHHHHHhhh-cCC-CCCCCCCccccCCCCCCCCCCCCCCcCCCCCCCCCCCC
Q 005224 631 DETDARPSMSEVMRELESIWN-MMP-ESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSSDVS 692 (707)
Q Consensus 631 ~~p~~RPt~~~v~~~L~~~~~-~~~-~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f~~~~~ 692 (707)
..|-.-.+..++.+.+..... ..+ ..+....+++.+||..||++|||++|+|+|+|+.....
T Consensus 213 ~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~~~~~~ 276 (279)
T 2w5a_A 213 MPPFTAFSQKELAGKIREGKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLILEHHH 276 (279)
T ss_dssp SCSSCCSSHHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTCCGGGS
T ss_pred CCCCcccCHHHHHHHHhhcccccCCcccCHHHHHHHHHHcCCCcccCCCHHHHHhChhhhhhcc
Confidence 344444455566555543221 111 22334567999999999999999999999999988765
No 462
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=91.98 E-value=0.01 Score=61.88 Aligned_cols=33 Identities=18% Similarity=0.302 Sum_probs=29.3
Q ss_pred CCCccccCCCCCCCCCCCCCCcCCCCCCCCCCC
Q 005224 659 KTPEFINSEHTSKEETPPSSSSMLKHPYVSSDV 691 (707)
Q Consensus 659 ~~~dll~~~L~~dP~~R~sa~e~L~Hp~f~~~~ 691 (707)
...+|+.+||..||++|||++|+|+||||....
T Consensus 249 ~l~~li~~~L~~dp~~Rpt~~e~l~hp~~~~~~ 281 (343)
T 3dbq_A 249 DLQDVLKCCLKRDPKQRISIPELLAHPYVQIQT 281 (343)
T ss_dssp HHHHHHHHHTCSSTTTSCCHHHHHTSHHHHSCC
T ss_pred HHHHHHHHHcCCChhHCCCHHHHHhCccccccC
Confidence 356799999999999999999999999997543
No 463
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=91.79 E-value=0.015 Score=60.01 Aligned_cols=31 Identities=13% Similarity=0.256 Sum_probs=24.4
Q ss_pred ccccCCCCCCCCCCCCCCcCCCCCCCCCCCC
Q 005224 662 EFINSEHTSKEETPPSSSSMLKHPYVSSDVS 692 (707)
Q Consensus 662 dll~~~L~~dP~~R~sa~e~L~Hp~f~~~~~ 692 (707)
+++.+||..||++|||++|+++||||.....
T Consensus 272 ~li~~~l~~dp~~Rps~~~ll~hp~~~~~~~ 302 (320)
T 3a99_A 272 HLIRWCLALRPSDRPTFEEIQNHPWMQDVLL 302 (320)
T ss_dssp HHHHHHTCSSGGGSCCHHHHHTSGGGSSCCC
T ss_pred HHHHHHccCChhhCcCHHHHhcCHhhcCccC
Confidence 4666677788888888888899999887654
No 464
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=91.62 E-value=0.011 Score=60.70 Aligned_cols=31 Identities=19% Similarity=0.329 Sum_probs=19.5
Q ss_pred ccccCCCCCCCCCCCCCCcCCCCCCCCCCCC
Q 005224 662 EFINSEHTSKEETPPSSSSMLKHPYVSSDVS 692 (707)
Q Consensus 662 dll~~~L~~dP~~R~sa~e~L~Hp~f~~~~~ 692 (707)
+++.+||..||++|||++|+|+||||.....
T Consensus 271 ~li~~~l~~dp~~Rps~~ell~h~~~~~~~~ 301 (313)
T 3cek_A 271 DVLKCCLKRDPKQRISIPELLAHPYVQIQTH 301 (313)
T ss_dssp HHHHHHTCSSTTTSCCHHHHHTSHHHHCC--
T ss_pred HHHHHHccCCcccCcCHHHHhcCccccCCCC
Confidence 4555566666777777777777777765544
No 465
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=91.60 E-value=0.0079 Score=62.52 Aligned_cols=34 Identities=15% Similarity=0.396 Sum_probs=22.9
Q ss_pred ccccCCCCCCCCCCCCCCcCCCCCCCCCCCCCCC
Q 005224 662 EFINSEHTSKEETPPSSSSMLKHPYVSSDVSGSN 695 (707)
Q Consensus 662 dll~~~L~~dP~~R~sa~e~L~Hp~f~~~~~~~~ 695 (707)
+|+.+||..||++|||++|+|+||||......+.
T Consensus 289 ~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~~~ 322 (340)
T 3an0_A 289 DFTSQCLKKNSKERPTYPELMQHPFFTLHESKGT 322 (340)
T ss_dssp HHHHHHTCSSGGGSCCHHHHTTSHHHHHHTTSCC
T ss_pred HHHHHHccCCcccCcCHHHHhcCcCccccccccc
Confidence 4566667777777777777888888765444333
No 466
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=91.53 E-value=0.019 Score=58.76 Aligned_cols=31 Identities=19% Similarity=0.358 Sum_probs=21.3
Q ss_pred ccccCCCCCCCCCCCCCCcCCCCCCCCCCCC
Q 005224 662 EFINSEHTSKEETPPSSSSMLKHPYVSSDVS 692 (707)
Q Consensus 662 dll~~~L~~dP~~R~sa~e~L~Hp~f~~~~~ 692 (707)
+++.+||..||++|||++|+++||||.....
T Consensus 262 ~li~~~l~~~p~~Rps~~e~l~~~~~~~~~~ 292 (312)
T 2iwi_A 262 ALIRRCLAPKPSSRPSLEEILLDPWMQTPAE 292 (312)
T ss_dssp HHHHHHTCSSTTTSCCHHHHHHSTTTCC---
T ss_pred HHHHHHccCChhhCcCHHHHhcChhhcCchh
Confidence 4566677777788888888888888876543
No 467
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=90.61 E-value=0.014 Score=60.22 Aligned_cols=30 Identities=23% Similarity=0.563 Sum_probs=23.1
Q ss_pred ccccCCCCCCCCCCCCCCcCCCCCCCCCCC
Q 005224 662 EFINSEHTSKEETPPSSSSMLKHPYVSSDV 691 (707)
Q Consensus 662 dll~~~L~~dP~~R~sa~e~L~Hp~f~~~~ 691 (707)
+||.+||..||++|||++|+|+||||....
T Consensus 265 ~li~~~l~~dp~~Rps~~~ll~hp~~~~~~ 294 (326)
T 2x7f_A 265 SFIESCLVKNHSQRPATEQLMKHPFIRDQP 294 (326)
T ss_dssp HHHHHHCCSSGGGSCCHHHHHTSHHHHCCT
T ss_pred HHHHHHhccChhhCCCHHHHhhChHHhhCc
Confidence 566777778888888888888888887543
No 468
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=90.32 E-value=0.043 Score=55.72 Aligned_cols=34 Identities=18% Similarity=0.402 Sum_probs=29.7
Q ss_pred CCCccccCCCCCCCCCCCCCCcCCCCCCCCCCCC
Q 005224 659 KTPEFINSEHTSKEETPPSSSSMLKHPYVSSDVS 692 (707)
Q Consensus 659 ~~~dll~~~L~~dP~~R~sa~e~L~Hp~f~~~~~ 692 (707)
...+++.+||..||++|||++|+|+||||.....
T Consensus 246 ~l~~li~~~l~~dp~~Rps~~~ll~~~~~~~~~~ 279 (303)
T 3a7i_A 246 PLKEFVEACLNKEPSFRPTAKELLKHKFILRNAK 279 (303)
T ss_dssp HHHHHHHHHCCSSGGGSCCHHHHTTCHHHHHHCC
T ss_pred HHHHHHHHHcCCChhhCcCHHHHhhChhhhcCCC
Confidence 3467999999999999999999999999966544
No 469
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=90.32 E-value=0.011 Score=61.07 Aligned_cols=31 Identities=29% Similarity=0.439 Sum_probs=27.9
Q ss_pred CCccccCCCCCCCCCCCCCCcCCCCCCCCCC
Q 005224 660 TPEFINSEHTSKEETPPSSSSMLKHPYVSSD 690 (707)
Q Consensus 660 ~~dll~~~L~~dP~~R~sa~e~L~Hp~f~~~ 690 (707)
..+|+.+||..||++|||++|+++||||...
T Consensus 262 l~~li~~~l~~dp~~Rps~~ell~hp~~~~~ 292 (327)
T 3aln_A 262 FINFVNLCLTKDESKRPKYKELLKHPFILMY 292 (327)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHTTSHHHHHH
T ss_pred HHHHHHHHhhCChhhCcCHHHHHhChHHHHh
Confidence 4579999999999999999999999999643
No 470
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=90.30 E-value=0.019 Score=61.16 Aligned_cols=33 Identities=18% Similarity=0.302 Sum_probs=29.4
Q ss_pred CCCccccCCCCCCCCCCCCCCcCCCCCCCCCCC
Q 005224 659 KTPEFINSEHTSKEETPPSSSSMLKHPYVSSDV 691 (707)
Q Consensus 659 ~~~dll~~~L~~dP~~R~sa~e~L~Hp~f~~~~ 691 (707)
.+.+||.+||..||++|||++|+|+||||....
T Consensus 296 ~~~~li~~~L~~dP~~Rps~~ell~hp~~~~~~ 328 (390)
T 2zmd_A 296 DLQDVLKCCLKRDPKQRISIPELLAHPYVQIQT 328 (390)
T ss_dssp HHHHHHHHHTCSSTTTSCCHHHHHTSHHHHSCC
T ss_pred HHHHHHHHHcccChhhCCCHHHHhhCcCccccC
Confidence 356799999999999999999999999997554
No 471
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=90.18 E-value=0.021 Score=58.35 Aligned_cols=33 Identities=15% Similarity=0.338 Sum_probs=29.1
Q ss_pred CCCCccccCCCCCCCCCCCCCCcCCCCCCCCCC
Q 005224 658 TKTPEFINSEHTSKEETPPSSSSMLKHPYVSSD 690 (707)
Q Consensus 658 ~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f~~~ 690 (707)
+...+++.+||..||++|||++|+|+||||...
T Consensus 258 ~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~ 290 (318)
T 2dyl_A 258 GDFQSFVKDCLTKDHRKRPKYNKLLEHSFIKRY 290 (318)
T ss_dssp HHHHHHHHHHTCSCTTTSCCHHHHTTSHHHHHH
T ss_pred HHHHHHHHHHccCChhHCcCHHHHhhCHHHHhc
Confidence 345679999999999999999999999999653
No 472
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=90.10 E-value=0.21 Score=34.38 Aligned_cols=7 Identities=29% Similarity=0.544 Sum_probs=2.9
Q ss_pred eehhHHH
Q 005224 316 IILGAIA 322 (707)
Q Consensus 316 ii~g~~~ 322 (707)
|+.|++.
T Consensus 13 IA~gVVg 19 (44)
T 2ks1_B 13 IATGMVG 19 (44)
T ss_dssp STHHHHH
T ss_pred EEeehhH
Confidence 3444443
No 473
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=89.95 E-value=0.14 Score=35.12 Aligned_cols=7 Identities=43% Similarity=0.629 Sum_probs=2.9
Q ss_pred eehhHHH
Q 005224 316 IILGAIA 322 (707)
Q Consensus 316 ii~g~~~ 322 (707)
|+.|++.
T Consensus 12 IA~gVVg 18 (44)
T 2l2t_A 12 IAAGVIG 18 (44)
T ss_dssp HHHHHHH
T ss_pred EEEeehH
Confidence 3444443
No 474
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=89.76 E-value=0.035 Score=57.98 Aligned_cols=34 Identities=24% Similarity=0.359 Sum_probs=29.9
Q ss_pred CCCccccCCCCCCCCCCCCCCcCCCCCCCCCCCC
Q 005224 659 KTPEFINSEHTSKEETPPSSSSMLKHPYVSSDVS 692 (707)
Q Consensus 659 ~~~dll~~~L~~dP~~R~sa~e~L~Hp~f~~~~~ 692 (707)
.+.+|+.+||..||++|||++|+|+||||.....
T Consensus 281 ~l~~li~~~l~~dP~~Rps~~~ll~h~~~~~~~~ 314 (348)
T 1u5q_A 281 YFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRERP 314 (348)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHTTCHHHHSCCC
T ss_pred HHHHHHHHHcccChhhCcCHHHHhhChhhhccCC
Confidence 3457999999999999999999999999976544
No 475
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=89.44 E-value=0.94 Score=48.03 Aligned_cols=28 Identities=36% Similarity=0.475 Sum_probs=24.2
Q ss_pred eEecCCCCCCEEE------cCCCcEEEeeecccc
Q 005224 497 VFHRDIKASNILL------DHKFTAKVADFGLSR 524 (707)
Q Consensus 497 ivH~Dlkp~NILl------~~~~~~kl~DFGla~ 524 (707)
++|+|+.+.|||+ +++..++++||..|.
T Consensus 246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~ 279 (401)
T 3g15_A 246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCE
T ss_pred eEEecCCCCeEEEecCcccCcCCeEEEechHhcc
Confidence 5799999999999 456789999998875
No 476
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=89.06 E-value=0.17 Score=34.62 Aligned_cols=27 Identities=22% Similarity=0.463 Sum_probs=12.5
Q ss_pred ceeeeehhHHHHHHHHHHHHHhhhhhhc
Q 005224 312 ALAGIILGAIAGAVTISAIVSLLIVRAH 339 (707)
Q Consensus 312 ~~~~ii~g~~~~~~~~~~~~~~~~~~~~ 339 (707)
.++++++| ++.++++++++.++++|++
T Consensus 13 ~Ia~~vVG-vll~vi~~l~~~~~~RRR~ 39 (44)
T 2jwa_A 13 SIISAVVG-ILLVVVLGVVFGILIKRRQ 39 (44)
T ss_dssp HHHHHHHH-HHHHHHHHHHHHHHHHHHC
T ss_pred chHHHHHH-HHHHHHHHHHHHhheehhh
Confidence 45666666 3333333333444444443
No 477
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=86.94 E-value=0.027 Score=60.41 Aligned_cols=35 Identities=6% Similarity=-0.000 Sum_probs=30.1
Q ss_pred CCCCCCCccccCCCCCCCCCCCCCCcCCCCCCCCC
Q 005224 655 ESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSS 689 (707)
Q Consensus 655 ~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f~~ 689 (707)
...+...+|+.+||..||++|||+.|+|+||||..
T Consensus 335 ~~~~~~~~li~~~l~~dP~~Rpt~~~~l~~~~~~~ 369 (413)
T 3dzo_A 335 NIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQ 369 (413)
T ss_dssp CCCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHH
T ss_pred cCCHHHHHHHHHHccCChhhCcCHHHHHhCHHHHH
Confidence 34455678999999999999999999999999854
No 478
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=82.10 E-value=0.13 Score=52.69 Aligned_cols=35 Identities=17% Similarity=0.209 Sum_probs=23.5
Q ss_pred CCCCccccCCCCCCCCCCCC-------CCcCCCCCCCCCCCC
Q 005224 658 TKTPEFINSEHTSKEETPPS-------SSSMLKHPYVSSDVS 692 (707)
Q Consensus 658 ~~~~dll~~~L~~dP~~R~s-------a~e~L~Hp~f~~~~~ 692 (707)
....+++.+||..||++||| .+++++|||+.+...
T Consensus 266 ~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~~~~~~~~ 307 (323)
T 3qup_A 266 EEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLSVLSTSQ 307 (323)
T ss_dssp HHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC--------
T ss_pred HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhhhcCCCC
Confidence 44567999999999999999 677889999988655
No 479
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=80.15 E-value=0.11 Score=53.24 Aligned_cols=26 Identities=4% Similarity=-0.023 Sum_probs=23.7
Q ss_pred CCccccCCCCCCCCCCCCCCcCCCCC
Q 005224 660 TPEFINSEHTSKEETPPSSSSMLKHP 685 (707)
Q Consensus 660 ~~dll~~~L~~dP~~R~sa~e~L~Hp 685 (707)
+.+||.+||+.||++|+|++|+|+||
T Consensus 279 l~~ll~~~L~~dP~~R~s~~ell~h~ 304 (319)
T 4euu_A 279 LTPVLANILEADQEKCWGFDQFFAET 304 (319)
T ss_dssp HHHHHHHHSCCCTTTSCCHHHHHHHH
T ss_pred hHHHHHHhccCChhhhccHHHhhhcc
Confidence 34689999999999999999999987
No 480
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=78.79 E-value=4.7 Score=38.31 Aligned_cols=115 Identities=9% Similarity=0.106 Sum_probs=78.4
Q ss_pred CCCcceeEEEEEEeCCeEEEEEecCCCC-CHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCE
Q 005224 429 HHRNLVSLVGYCDEEGEQMLVYEFMSNG-TLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNI 507 (707)
Q Consensus 429 ~H~nIv~l~~~~~~~~~~~lV~E~~~~g-sL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NI 507 (707)
.||+.+.. .+-.+++...+.|+.-+.+ ++.. + ..++...+++++..|+....+++. -+|--+.|+|+
T Consensus 43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~-i-----k~~~~~eKlr~l~ni~~l~~~~~~-----r~tf~L~P~NL 110 (215)
T 4ann_A 43 HSPYFIDA-ELTELRDSFQIHYDINDNHTPFDN-I-----KSFTKNEKLRYLLNIKNLEEVNRT-----RYTFVLAPDEL 110 (215)
T ss_dssp CCTTBCCE-EEEECSSEEEEEECCCTTSEEGGG-G-----GGSCHHHHHHHHHHGGGGGGGGGS-----SEECCCSGGGE
T ss_pred cCCcccce-EEEEcccEEEEEEEcCcccCCHHH-H-----HhcCHHHHHHHHHHHHHHHHHhcC-----ceEEEEecceE
Confidence 58888866 5666667777767654322 2222 2 237788999999999887766554 47889999999
Q ss_pred EEcCCCcEEEeeecccccCCCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCC
Q 005224 508 LLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPIS 584 (707)
Q Consensus 508 Ll~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~elltG~~pf~ 584 (707)
+++.++.+++.=.|+...+. |. .++...=.-.+=|++..+++++..|.
T Consensus 111 ~f~~~~~p~i~~RGik~~l~------------------------P~-----~~~ee~fL~qyKAliiall~~K~~Fe 158 (215)
T 4ann_A 111 FFTRDGLPIAKTRGLQNVVD------------------------PL-----PVSEAEFLTRYKALVICAFNEKQSFD 158 (215)
T ss_dssp EECTTSCEEESCCEETTTBS------------------------CC-----CCCHHHHHHHHHHHHHHHHCTTCCHH
T ss_pred EEcCCCCEEEEEccCccCCC------------------------CC-----CCCHHHHHHHHHHHHHHHHcCCCCHH
Confidence 99999999998777543221 11 11222223357889999999988874
No 481
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=77.50 E-value=0.41 Score=47.77 Aligned_cols=50 Identities=10% Similarity=0.155 Sum_probs=34.6
Q ss_pred CCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCCCC
Q 005224 635 ARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKH 684 (707)
Q Consensus 635 ~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~H 684 (707)
.......................+...+++.+||..||++|||++|+++|
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 269 (289)
T 4fvq_A 220 SALDSQRKLQFYEDRHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRD 269 (289)
T ss_dssp TTSCHHHHHHHHHTTCCCCCCSSCTTHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred cccchHHHHHHhhccCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 33344444444444333344456677889999999999999999998864
No 482
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=76.09 E-value=1.5 Score=45.35 Aligned_cols=33 Identities=6% Similarity=0.125 Sum_probs=29.8
Q ss_pred CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005224 612 SYPSECVEKFIKLALKCCQDETDARPSMSEVMR 644 (707)
Q Consensus 612 ~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~ 644 (707)
.++..++..+.+++.+|++.+|.+||++.++++
T Consensus 301 ~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 333 (373)
T 1q8y_A 301 KFSKDEAKEISDFLSPMLQLDPRKRADAGGLVN 333 (373)
T ss_dssp CCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHT
T ss_pred cCCcchHHHHHHHHHHHhccCccccCCHHHHhh
Confidence 356788899999999999999999999999875
No 483
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=73.86 E-value=7.6 Score=37.00 Aligned_cols=115 Identities=11% Similarity=0.050 Sum_probs=76.7
Q ss_pred CCCcceeEEEEEEeCCeEEEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHH-HHHhCCCCCeEecCCCCCCE
Q 005224 429 HHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGIL-YLHTEADPPVFHRDIKASNI 507 (707)
Q Consensus 429 ~H~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~-yLH~~~~~~ivH~Dlkp~NI 507 (707)
.||++ -..+-.+++...+.|+.-+++.=...++ .++...+++++..|+.... +++. -+|--+.|+|+
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i~-----~~~~~eKlrll~nl~~L~~~~~~~-----r~tf~l~P~NL 115 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAIR-----KTTLLSRIRAAIHLVSKVKHHSAR-----RLIFIVCPENL 115 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHHH-----TSCHHHHHHHHHHHHHHHSSCCSS-----SEECCCCGGGE
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHHH-----hcCHHHHHHHHHHHHHHHHHhhhC-----ceeEEEeCceE
Confidence 57877 4444567778888787654433233332 2778889999988876655 4443 57889999999
Q ss_pred EEcCCCcEEEeeecccccCCCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCC
Q 005224 508 LLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPIS 584 (707)
Q Consensus 508 Ll~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwS~Gvll~elltG~~pf~ 584 (707)
++|.++.++|.=.|+-..+ +|.- .+..-=.-.+=|++..++.++..|+
T Consensus 116 ~f~~~~~p~i~hRGi~~~l------------------------pP~e-----~~ee~fl~qyKali~all~~K~~Fe 163 (219)
T 4ano_A 116 MFNRALEPFFLHVGVKESL------------------------PPDE-----WDDERLLREVKATVLALTEGEYRFD 163 (219)
T ss_dssp EECTTCCEEESCCEETTTB------------------------SSCS-----CCHHHHHHHHHHHHHHHTTCSSCHH
T ss_pred EEeCCCcEEEEEcCCcccC------------------------CCCC-----CCHHHHHHHHHHHHHHHHcCCCCHH
Confidence 9999999999877754322 2211 1111122357788888888887773
No 484
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=73.30 E-value=1.1 Score=44.92 Aligned_cols=28 Identities=18% Similarity=0.051 Sum_probs=24.6
Q ss_pred HHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005224 617 CVEKFIKLALKCCQDETDARPSMSEVMR 644 (707)
Q Consensus 617 ~~~~l~~l~~~c~~~~p~~RPt~~~v~~ 644 (707)
.+.++.+++.+|++.||++|||+.|+++
T Consensus 235 ~s~~~~~li~~~L~~dP~~R~s~~eil~ 262 (275)
T 3hyh_A 235 LSPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp SCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred CCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence 3456789999999999999999999876
No 485
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=73.20 E-value=0.35 Score=52.50 Aligned_cols=60 Identities=5% Similarity=0.035 Sum_probs=17.5
Q ss_pred ccceEeeeCceEEEEEEeCC-CcEEEE------EEeccCChhh--HHHHHHHHHHHHccCCCcceeEEEEEE
Q 005224 379 SSTQIGQGGYGKVYKGILPD-GTVVAV------KRAQEGSLQG--EKEFLTEIQFLSRLHHRNLVSLVGYCD 441 (707)
Q Consensus 379 ~~~~lG~G~~g~Vy~~~~~~-~~~vav------K~l~~~~~~~--~~~~~~E~~~l~~l~H~nIv~l~~~~~ 441 (707)
..+.|| ||.||+|.+.. ..+||| |..+...... ...+.+|..+++..+|+|+++.+++..
T Consensus 146 l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~ 214 (463)
T 3cxl_A 146 IYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKV 214 (463)
T ss_dssp STTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEE
T ss_pred ccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEE
Confidence 355676 99999999853 367888 7665433222 246888999999999999999887653
No 486
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=72.74 E-value=1.8 Score=43.87 Aligned_cols=32 Identities=16% Similarity=0.211 Sum_probs=28.4
Q ss_pred CChHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005224 613 YPSECVEKFIKLALKCCQDETDARPSMSEVMR 644 (707)
Q Consensus 613 ~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~ 644 (707)
.+..++..+.+++.+|++.+|.+||++.++++
T Consensus 297 ~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 328 (339)
T 1z57_A 297 SQDVEHERLFDLIQKMLEYDPAKRITLREALK 328 (339)
T ss_dssp CCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred cchhhHHHHHHHHHHHhCcCcccccCHHHHhc
Confidence 35577889999999999999999999999875
No 487
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=72.56 E-value=1.8 Score=45.24 Aligned_cols=28 Identities=21% Similarity=0.437 Sum_probs=26.2
Q ss_pred ccccCCCCCCCCCCCCCCcCCCCCCCCC
Q 005224 662 EFINSEHTSKEETPPSSSSMLKHPYVSS 689 (707)
Q Consensus 662 dll~~~L~~dP~~R~sa~e~L~Hp~f~~ 689 (707)
+||.+||..||++|||++|+|+||||++
T Consensus 370 ~li~~~L~~dP~~Rpt~~e~l~hp~~~~ 397 (397)
T 1wak_A 370 DFLLPMLELIPEKRATAAECLRHPWLNS 397 (397)
T ss_dssp HHHGGGGCSSGGGSCCHHHHHTSGGGGC
T ss_pred HHHHHHhccChhhcCCHHHHhhCccccC
Confidence 6889999999999999999999999974
No 488
>2k9y_A Ephrin type-A receptor 2; receptor tyrosine kinase, membrane protein, dimeric transmembrane domain, ephrin receptor, ATP-binding, glycoprotein; NMR {Homo sapiens}
Probab=71.16 E-value=1.7 Score=29.37 Aligned_cols=16 Identities=25% Similarity=0.304 Sum_probs=8.9
Q ss_pred eeeeehhHHHHHHHHH
Q 005224 313 LAGIILGAIAGAVTIS 328 (707)
Q Consensus 313 ~~~ii~g~~~~~~~~~ 328 (707)
+++|++|+++++++++
T Consensus 12 ~~~I~~~vv~Gv~ll~ 27 (41)
T 2k9y_A 12 NLAVIGGVAVGVVLLL 27 (41)
T ss_dssp STHHHHHHHHHHHHHH
T ss_pred eEEEEeehhHHHHHHH
Confidence 3445666666655544
No 489
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=70.77 E-value=1.2 Score=43.89 Aligned_cols=28 Identities=18% Similarity=0.051 Sum_probs=24.6
Q ss_pred HHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005224 617 CVEKFIKLALKCCQDETDARPSMSEVMR 644 (707)
Q Consensus 617 ~~~~l~~l~~~c~~~~p~~RPt~~~v~~ 644 (707)
++..+.+++.+|++.+|.+||++.|+++
T Consensus 235 ~~~~~~~li~~~l~~dP~~Rps~~e~l~ 262 (275)
T 2eue_A 235 LSPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp SCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred CCHHHHHHHHHHhhcCHhHCCCHHHHhh
Confidence 3456789999999999999999999875
No 490
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=70.27 E-value=0.46 Score=49.10 Aligned_cols=37 Identities=16% Similarity=0.109 Sum_probs=30.5
Q ss_pred CCCCCCCccccCCCCCCCCCCCCCCc-------------CCCCCCCCCCC
Q 005224 655 ESDTKTPEFINSEHTSKEETPPSSSS-------------MLKHPYVSSDV 691 (707)
Q Consensus 655 ~~~~~~~dll~~~L~~dP~~R~sa~e-------------~L~Hp~f~~~~ 691 (707)
..++.+.+||.+||+.||++|||++| +|+|||+....
T Consensus 281 ~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~~~l~hPw~~~~~ 330 (336)
T 4g3f_A 281 SCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEVGGLKSPWKGEYK 330 (336)
T ss_dssp TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTTSSCSCSSSSCC
T ss_pred cCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhhhhccCCCcCCCC
Confidence 34455678999999999999999998 48999997543
No 491
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=69.84 E-value=1.4 Score=44.22 Aligned_cols=29 Identities=17% Similarity=0.350 Sum_probs=25.3
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005224 616 ECVEKFIKLALKCCQDETDARPSMSEVMR 644 (707)
Q Consensus 616 ~~~~~l~~l~~~c~~~~p~~RPt~~~v~~ 644 (707)
.++..+.+++.+||+.+|.+||++.++++
T Consensus 241 ~~~~~~~~li~~~l~~dp~~Rps~~ell~ 269 (297)
T 3fxz_A 241 KLSAIFRDFLNRCLEMDVEKRGSAKELLQ 269 (297)
T ss_dssp GSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred ccCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 34567889999999999999999999875
No 492
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=69.27 E-value=3.1 Score=28.55 Aligned_cols=31 Identities=19% Similarity=0.310 Sum_probs=16.7
Q ss_pred cccceeeeehhHHHHHHHHHHHHHhhhhhhc
Q 005224 309 SKAALAGIILGAIAGAVTISAIVSLLIVRAH 339 (707)
Q Consensus 309 ~~~~~~~ii~g~~~~~~~~~~~~~~~~~~~~ 339 (707)
...+|++-++|-+++++++++++.++++|++
T Consensus 9 ~~~~IA~gVVgGv~~~~ii~~~~~~~~RRr~ 39 (44)
T 2ks1_B 9 KIPSIATGMVGALLLLLVVALGIGLFMRRRH 39 (44)
T ss_dssp CSSSSTHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred CcceEEeehhHHHHHHHHHHHHHHHHhhhhH
Confidence 3455666666655555555544444454443
No 493
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=68.42 E-value=2.1 Score=43.05 Aligned_cols=26 Identities=15% Similarity=0.392 Sum_probs=23.4
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHHH
Q 005224 619 EKFIKLALKCCQDETDARPSMSEVMR 644 (707)
Q Consensus 619 ~~l~~l~~~c~~~~p~~RPt~~~v~~ 644 (707)
.++.+++.+||+.+|++|||+.++++
T Consensus 257 ~~~~~li~~~L~~dP~~R~s~~e~l~ 282 (290)
T 3fpq_A 257 PEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp HHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHHHHHHHHHccCChhHCcCHHHHhc
Confidence 46788999999999999999999875
No 494
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=68.13 E-value=3 Score=43.47 Aligned_cols=30 Identities=13% Similarity=0.151 Sum_probs=26.4
Q ss_pred ccccCCCCCCCCCCCCCCcCCCCCCCCCCC
Q 005224 662 EFINSEHTSKEETPPSSSSMLKHPYVSSDV 691 (707)
Q Consensus 662 dll~~~L~~dP~~R~sa~e~L~Hp~f~~~~ 691 (707)
+||.+||++||++|||++|+|+||||....
T Consensus 351 dli~~mL~~dP~~Rpta~e~L~hp~f~~~~ 380 (382)
T 2vx3_A 351 DLILRMLDYDPKTRIQPYYALQHSFFKKTA 380 (382)
T ss_dssp HHHHHHTCSCTTTSCCHHHHTTSGGGCC--
T ss_pred HHHHHhcCCChhhCCCHHHHhcCcccccCC
Confidence 688899999999999999999999998643
No 495
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=67.93 E-value=2.7 Score=42.97 Aligned_cols=31 Identities=13% Similarity=0.104 Sum_probs=27.2
Q ss_pred ChHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005224 614 PSECVEKFIKLALKCCQDETDARPSMSEVMR 644 (707)
Q Consensus 614 ~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~ 644 (707)
.......+.+++.+|++.+|.+|||+.++++
T Consensus 303 ~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~ 333 (355)
T 2eu9_A 303 DSLEHVQLFDLMRRMLEFDPAQRITLAEALL 333 (355)
T ss_dssp CSHHHHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred cchhHHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 3456778999999999999999999999874
No 496
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=66.75 E-value=2.2 Score=42.63 Aligned_cols=29 Identities=14% Similarity=0.306 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005224 616 ECVEKFIKLALKCCQDETDARPSMSEVMR 644 (707)
Q Consensus 616 ~~~~~l~~l~~~c~~~~p~~RPt~~~v~~ 644 (707)
.++..+.+++..|++.+|.+||++.++++
T Consensus 247 ~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 275 (302)
T 2j7t_A 247 KWSVEFRDFLKIALDKNPETRPSAAQLLE 275 (302)
T ss_dssp GSCHHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred ccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 34567889999999999999999998865
No 497
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=66.59 E-value=3.1 Score=41.77 Aligned_cols=28 Identities=11% Similarity=0.177 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005224 617 CVEKFIKLALKCCQDETDARPSMSEVMR 644 (707)
Q Consensus 617 ~~~~l~~l~~~c~~~~p~~RPt~~~v~~ 644 (707)
.+..+.+++.+|++.+|.+|||+.++++
T Consensus 257 ~~~~~~~li~~~L~~dP~~Rpt~~ell~ 284 (311)
T 4agu_A 257 ISYPALGLLKGCLHMDPTERLTCEQLLH 284 (311)
T ss_dssp CCHHHHHHHHHHCCSSTTTSCCHHHHHT
T ss_pred ccHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 4566889999999999999999999976
No 498
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=66.02 E-value=3.3 Score=41.09 Aligned_cols=26 Identities=19% Similarity=0.397 Sum_probs=23.4
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHHH
Q 005224 619 EKFIKLALKCCQDETDARPSMSEVMR 644 (707)
Q Consensus 619 ~~l~~l~~~c~~~~p~~RPt~~~v~~ 644 (707)
..+.+++.+|++.+|.+||++.++++
T Consensus 253 ~~~~~li~~~L~~dP~~Rps~~e~l~ 278 (285)
T 3is5_A 253 PQAVDLLKQMLTKDPERRPSAAQVLH 278 (285)
T ss_dssp HHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred HHHHHHHHHHccCChhhCcCHHHHhc
Confidence 56778999999999999999999875
No 499
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=64.97 E-value=1.7 Score=43.43 Aligned_cols=34 Identities=24% Similarity=0.456 Sum_probs=0.0
Q ss_pred CCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005224 611 GSYPSECVEKFIKLALKCCQDETDARPSMSEVMR 644 (707)
Q Consensus 611 ~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~ 644 (707)
......++..+.+++.+||+.+|.+||++.++++
T Consensus 254 ~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 287 (303)
T 2vwi_A 254 KEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLR 287 (303)
T ss_dssp -CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred chhhhhhhHHHHHHHHHHccCChhhCcCHHHHhh
No 500
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=64.63 E-value=2.1 Score=44.82 Aligned_cols=33 Identities=30% Similarity=0.532 Sum_probs=0.0
Q ss_pred CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005224 612 SYPSECVEKFIKLALKCCQDETDARPSMSEVMR 644 (707)
Q Consensus 612 ~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~ 644 (707)
..+..++..+.+++.+||+.+|.+|||+.++++
T Consensus 301 ~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~ 333 (389)
T 3gni_B 301 PYHRTFSPHFHHFVEQCLQRNPDARPSASTLLN 333 (389)
T ss_dssp -----CCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred ccccccCHHHHHHHHHHhhcCcccCCCHHHHhc
Done!