BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005225
(707 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9C5J8|OEP80_ARATH Outer envelope protein 80, chloroplastic OS=Arabidopsis thaliana
GN=OEP80 PE=1 SV=1
Length = 732
Score = 1098 bits (2841), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 550/737 (74%), Positives = 610/737 (82%), Gaps = 35/737 (4%)
Query: 1 MPLRNDDVRFISSPLKIPPFRPEPPVPF----------FAQTLTKSKNSLSHLIYSLNE- 49
M NDDVRF SS ++I P+ F L+ ++NSL+ ++ SL
Sbjct: 1 MHCHNDDVRFSSSSIRIHSPSPKEQHSLLTNLQSCSKTFVSHLSNTRNSLNQMLQSLKNR 60
Query: 50 ------STRSTEPFTRKLQSFAEHLYGKSVRICSTCLSMTG---------AVDTL--VNF 92
S R T+ L S + + GKS I + + T V+T+ ++
Sbjct: 61 HTPPPRSVRRPNLPTQMLNSVTQLMIGKSSPISLSLIQSTQFNWSESRDENVETIRGLSS 120
Query: 93 PLLCSASLSLNQSSAEFPAQSELSTQLQQKAQQP--HSVSRSDEERVLISEVLVRNKDGE 150
PLLC ASLSL + P +S S + + QQ HSVSR+ EERVLISEVLVR KDGE
Sbjct: 121 PLLCCASLSLTR-----PNESTQSVEGKDTVQQQKGHSVSRNAEERVLISEVLVRTKDGE 175
Query: 151 ELERKDLETEALTALKACRANSALTVREVQEDVHRIIDSGYFCSCMPVAVDTRDGIRLVF 210
ELERKDLE EAL ALKACRANSALT+REVQEDVHRII+SGYFCSC PVAVDTRDGIRL+F
Sbjct: 176 ELERKDLEMEALAALKACRANSALTIREVQEDVHRIIESGYFCSCTPVAVDTRDGIRLMF 235
Query: 211 QVEPNQEFHGLVCEGANVLPTKFVEDAFRDGYGKVVNIRRLDEVITSINGWYMERGLFGM 270
QVEPNQEF GLVCE ANVLP+KF+ +AFRDG+GKV+NI+RL+E ITSINGWYMERGLFG+
Sbjct: 236 QVEPNQEFRGLVCENANVLPSKFIHEAFRDGFGKVINIKRLEEAITSINGWYMERGLFGI 295
Query: 271 VSGVEILSGGIIRLQVAEAEVNNISIRFLDRKTGEPTKGKTRPETILRQLTTKKGQVYSM 330
VS ++ LSGGI+RLQVAEAEVNNISIRFLDRKTGEPTKGKT PETILRQLTTKKGQVYSM
Sbjct: 296 VSDIDTLSGGIVRLQVAEAEVNNISIRFLDRKTGEPTKGKTSPETILRQLTTKKGQVYSM 355
Query: 331 LQGKRDVETVLTMGIMEDVSIIPQPAGDTGKVDLIMNVVERPSGGFSAGGGISSGITSGP 390
LQGKRDV+TVL MGIMEDVSIIPQPAGD+GKVDLIMN VERPSGGFSAGGGISSGITSGP
Sbjct: 356 LQGKRDVDTVLAMGIMEDVSIIPQPAGDSGKVDLIMNCVERPSGGFSAGGGISSGITSGP 415
Query: 391 LSGLIGSFAYSHRNVFGRNQKLNISLERGQIDSIFRINYTDPWIEGDDKRTSRTIMVQNS 450
LSGLIGSFAYSHRN+FGRNQKLN+SLERGQIDSIFRINYTDPWIEGDDKRTSR+IMVQNS
Sbjct: 416 LSGLIGSFAYSHRNLFGRNQKLNVSLERGQIDSIFRINYTDPWIEGDDKRTSRSIMVQNS 475
Query: 451 RTPGTHVHGNQPDNSSLTIGRVTAGMEFSRPIRPKWSGTVGLIFQHSGARDEKGNPIIKD 510
RTPG VHGNQPDNSSLTIGRVTAG+E+SRP RPKW+GT GLIFQH+GARDE+GNPIIKD
Sbjct: 476 RTPGNLVHGNQPDNSSLTIGRVTAGVEYSRPFRPKWNGTAGLIFQHAGARDEQGNPIIKD 535
Query: 511 FYSSPLTASGKTNDEMLIAKFESVYTGSGDQGSSMFVFNMEQGLPVWPEWLFFNRVNARA 570
FYSSPLTASGK +DE ++AK ES+YTGSGDQGS+MF FNMEQGLPV PEWL FNRV RA
Sbjct: 536 FYSSPLTASGKPHDETMLAKLESIYTGSGDQGSTMFAFNMEQGLPVLPEWLCFNRVTGRA 595
Query: 571 RKGVEIGPARLLLSLSGGHVVGNFSPHEAFAIGGTNSVRGYEEGAVGSGRSYVVGSGEIS 630
RKG+ IGPAR L SLSGGHVVG FSPHEAF IGGTNSVRGYEEGAVGSGRSYVVGSGE+S
Sbjct: 596 RKGIHIGPARFLFSLSGGHVVGKFSPHEAFVIGGTNSVRGYEEGAVGSGRSYVVGSGELS 655
Query: 631 FPMLGPVEGVIFSDYGTDLGSGPSVPGDPAGARLKPGSGYGYGFGIRVDSPLGPLRLEYA 690
FP+ GPVEGVIF+DYGTD+GSG +VPGDPAGARLKPGSGYGYG G+RVDSPLGPLRLEYA
Sbjct: 656 FPVRGPVEGVIFTDYGTDMGSGSTVPGDPAGARLKPGSGYGYGLGVRVDSPLGPLRLEYA 715
Query: 691 FNDKQAKRFHFGVGYRN 707
FND+ A RFHFGVG RN
Sbjct: 716 FNDQHAGRFHFGVGLRN 732
>sp|A2X208|OEP80_ORYSI Outer envelope protein 80, chloroplastic OS=Oryza sativa subsp.
indica GN=OEP80 PE=3 SV=1
Length = 665
Score = 937 bits (2422), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 462/587 (78%), Positives = 521/587 (88%), Gaps = 1/587 (0%)
Query: 122 KAQQPHSVSRSDEERVLISEVLVRNKDGEELERKDLETEALTALKACRANSALTVREVQE 181
+ Q+ EERVLISEV VR KDGE LER +LE A AL+ACR N+ALTVREVQE
Sbjct: 79 RRQKDGGGGGGGEERVLISEVAVRGKDGEPLERPELEAAAAAALRACRPNAALTVREVQE 138
Query: 182 DVHRIIDSGYFCSCMPVAVDTRDGIRLVFQVEPNQEFHGLVCEGANVLPTKFVEDAFRDG 241
DVHR+++SG F SCMPVAVDTRDGIRLVF+VEPNQ+FHGLVCEGAN+LP+KF+EDAF D
Sbjct: 139 DVHRVVESGLFRSCMPVAVDTRDGIRLVFEVEPNQDFHGLVCEGANMLPSKFLEDAFHDR 198
Query: 242 YGKVVNIRRLDEVITSINGWYMERGLFGMVSGVEILSGGIIRLQVAEAEVNNISIRFLDR 301
+GK++NIR LD+VI S+NGWY ERGL G+VS EILSGGI+RLQV+EAEVNNI+IRFLDR
Sbjct: 199 HGKIINIRHLDQVIKSVNGWYQERGLTGLVSYAEILSGGILRLQVSEAEVNNINIRFLDR 258
Query: 302 KTGEPTKGKTRPETILRQLTTKKGQVYSMLQGKRDVETVLTMGIMEDVSIIPQPAGDTGK 361
+TGEPT GKT+PETILR LTTKKGQ Y+ Q KRDVET+LTMGIMEDV+IIPQP GD+ K
Sbjct: 259 RTGEPTVGKTQPETILRHLTTKKGQAYNRAQVKRDVETILTMGIMEDVTIIPQPVGDSNK 318
Query: 362 VDLIMNVVERPSGGFSAGGGISSGITSGPLSGLIGSFAYSHRNVFGRNQKLNISLERGQI 421
VDL+MN+VERPSGGFSAGGGISSGIT+GPLSGLIGSFAYSHRNVFGRN+KLN+SLERGQI
Sbjct: 319 VDLVMNLVERPSGGFSAGGGISSGITNGPLSGLIGSFAYSHRNVFGRNKKLNLSLERGQI 378
Query: 422 DSIFRINYTDPWIEGDDKRTSRTIMVQNSRTPGTHVH-GNQPDNSSLTIGRVTAGMEFSR 480
DSIFR+NYTDPWI+GD+KRTSRTIMVQNSRTPGT +H G+ PD+ +TIGRVTAG+E+SR
Sbjct: 379 DSIFRLNYTDPWIDGDNKRTSRTIMVQNSRTPGTLIHGGDHPDHGPITIGRVTAGIEYSR 438
Query: 481 PIRPKWSGTVGLIFQHSGARDEKGNPIIKDFYSSPLTASGKTNDEMLIAKFESVYTGSGD 540
P RPKWSGT+GLIFQH+GARD+KGNPII+DFY+S LTASG D+ L+AK ESVYT SGD
Sbjct: 439 PFRPKWSGTLGLIFQHAGARDDKGNPIIRDFYNSQLTASGNAYDDTLLAKLESVYTDSGD 498
Query: 541 QGSSMFVFNMEQGLPVWPEWLFFNRVNARARKGVEIGPARLLLSLSGGHVVGNFSPHEAF 600
+ S+MFVFN+EQGLP+ PEWL FNRV AR R+G EIGPARLLLS SGGHV GNFSPHEAF
Sbjct: 499 RSSTMFVFNIEQGLPILPEWLSFNRVTARLRQGYEIGPARLLLSASGGHVEGNFSPHEAF 558
Query: 601 AIGGTNSVRGYEEGAVGSGRSYVVGSGEISFPMLGPVEGVIFSDYGTDLGSGPSVPGDPA 660
AIGGTNSVRGYEEGAVGSGRSY VGSGE+S M GP+EGV+F DYG+DL SGP VPGDPA
Sbjct: 559 AIGGTNSVRGYEEGAVGSGRSYAVGSGEVSCRMFGPLEGVVFGDYGSDLSSGPKVPGDPA 618
Query: 661 GARLKPGSGYGYGFGIRVDSPLGPLRLEYAFNDKQAKRFHFGVGYRN 707
GAR KPGSGYGYG GIRVDSPLGPLRLEYAFNDKQA+RFHFGVGYRN
Sbjct: 619 GARGKPGSGYGYGVGIRVDSPLGPLRLEYAFNDKQARRFHFGVGYRN 665
>sp|Q6H7M7|OEP80_ORYSJ Outer envelope protein 80, chloroplastic OS=Oryza sativa subsp.
japonica GN=OEP80 PE=3 SV=2
Length = 665
Score = 913 bits (2360), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 460/575 (80%), Positives = 518/575 (90%), Gaps = 1/575 (0%)
Query: 134 EERVLISEVLVRNKDGEELERKDLETEALTALKACRANSALTVREVQEDVHRIIDSGYFC 193
EERVLISEV VR KDGE LER +LE A AL+ACR N+ALTVREVQEDVHR+++SG F
Sbjct: 91 EERVLISEVAVRGKDGEPLERPELEAAAAAALRACRPNAALTVREVQEDVHRVVESGLFR 150
Query: 194 SCMPVAVDTRDGIRLVFQVEPNQEFHGLVCEGANVLPTKFVEDAFRDGYGKVVNIRRLDE 253
SCMPVAVDTRDGIRLVF+VEPNQ+FHGLVCEGAN+LP+KF+EDAF D +GK++NIR LD+
Sbjct: 151 SCMPVAVDTRDGIRLVFEVEPNQDFHGLVCEGANMLPSKFLEDAFHDRHGKIINIRHLDQ 210
Query: 254 VITSINGWYMERGLFGMVSGVEILSGGIIRLQVAEAEVNNISIRFLDRKTGEPTKGKTRP 313
VI S+NGWY ERGL G+VS EILSGGI+RLQV+EAEVNNI+IRFLDR+TGEPT GKT+P
Sbjct: 211 VIKSVNGWYQERGLTGLVSYAEILSGGILRLQVSEAEVNNINIRFLDRRTGEPTVGKTQP 270
Query: 314 ETILRQLTTKKGQVYSMLQGKRDVETVLTMGIMEDVSIIPQPAGDTGKVDLIMNVVERPS 373
ETILR LTTKKGQ Y+ Q KRDVET+LTMGIMEDV+IIPQP GD+ KVDL+MN+VERPS
Sbjct: 271 ETILRHLTTKKGQAYNRAQVKRDVETILTMGIMEDVTIIPQPVGDSNKVDLVMNLVERPS 330
Query: 374 GGFSAGGGISSGITSGPLSGLIGSFAYSHRNVFGRNQKLNISLERGQIDSIFRINYTDPW 433
GGFSAGGGISSGIT+GPLSGLIGSFAYSHRNVFGRN+KLN+SLERGQIDSIFR+NYTDPW
Sbjct: 331 GGFSAGGGISSGITNGPLSGLIGSFAYSHRNVFGRNKKLNLSLERGQIDSIFRLNYTDPW 390
Query: 434 IEGDDKRTSRTIMVQNSRTPGTHVH-GNQPDNSSLTIGRVTAGMEFSRPIRPKWSGTVGL 492
I+GD+KRTSRTIMVQNSRTPGT +H G+ PD+ +TIGRVTAG+E+SRP RPKWSGT+GL
Sbjct: 391 IDGDNKRTSRTIMVQNSRTPGTLIHGGDHPDHGPITIGRVTAGIEYSRPFRPKWSGTLGL 450
Query: 493 IFQHSGARDEKGNPIIKDFYSSPLTASGKTNDEMLIAKFESVYTGSGDQGSSMFVFNMEQ 552
IFQH+GARD+KGNPII+DFY+S LTASG D+ L+AK ESVYT SGD+ S+MFVFN+EQ
Sbjct: 451 IFQHAGARDDKGNPIIRDFYNSQLTASGNAYDDTLLAKLESVYTDSGDRSSTMFVFNIEQ 510
Query: 553 GLPVWPEWLFFNRVNARARKGVEIGPARLLLSLSGGHVVGNFSPHEAFAIGGTNSVRGYE 612
GLP+ PEWL FNRV AR R+G EIGPARLLLS SGGHV GNFSPHEAFAIGGTNSVRGYE
Sbjct: 511 GLPILPEWLSFNRVTARLRQGYEIGPARLLLSASGGHVEGNFSPHEAFAIGGTNSVRGYE 570
Query: 613 EGAVGSGRSYVVGSGEISFPMLGPVEGVIFSDYGTDLGSGPSVPGDPAGARLKPGSGYGY 672
EGAVGSGRSY VGSGE+S M GP+EGV+F DYG+DL SGP VPGDPAGAR KPGSGYGY
Sbjct: 571 EGAVGSGRSYAVGSGEVSCRMFGPLEGVVFGDYGSDLSSGPKVPGDPAGARGKPGSGYGY 630
Query: 673 GFGIRVDSPLGPLRLEYAFNDKQAKRFHFGVGYRN 707
G G+RVDSPLGPLRLEYAFNDKQA+RFHFGVGYRN
Sbjct: 631 GVGVRVDSPLGPLRLEYAFNDKQARRFHFGVGYRN 665
>sp|Q43715|TOC75_PEA Protein TOC75, chloroplastic OS=Pisum sativum GN=TOC75 PE=1 SV=1
Length = 809
Score = 131 bits (329), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 147/576 (25%), Positives = 246/576 (42%), Gaps = 67/576 (11%)
Query: 182 DVHRIIDSGYFCSCMPVAVD--TRDGIRLVFQVEPNQEFHGLVCEGANVLPTKFVEDAFR 239
D R I+ G PV +D + ++ F +E+ + L V + +
Sbjct: 243 DRFRCINVGLMGQSKPVEMDPDMSEKEKIEFFRRQEREYKRRISSARPCLLPTSVHEEIK 302
Query: 240 DGYGKV--VNIRRLDEVITSINGWYMERGL-------FGMVSGVEILSGGIIRLQVAEAE 290
D + V+ R L ++ + WY E G FG ++ E++ +V E +
Sbjct: 303 DMLAEQGRVSARLLQKIRDRVQSWYHEEGYACAQVVNFGNLNTREVVC------EVVEGD 356
Query: 291 VNNISIRFLDRKTGEPTKGKTRPETILRQLTTK--KGQVYSMLQGKRDVETVLTMGIMED 348
+ +SI++LD K G +G T + R+L + G +++ GK+ + + ++ + +
Sbjct: 357 ITKLSIQYLD-KLGNVVEGNTEGPVVQRELPKQLLPGHTFNIEAGKQALRNINSLALFSN 415
Query: 349 VSIIPQP-AGDTGK--VDLIMNVVERPSGGFSAGGGISSGITSGPLSGLI---GSFAYSH 402
+ + P+P + G V++ + +E+ S S I G P + G+ + H
Sbjct: 416 IEVNPRPDEMNEGSIIVEIKLKELEQKSAEVSTEWSIVPGRGGRPTLASLQPGGTITFEH 475
Query: 403 RNVFGRNQKLNISLERG-----QIDSIFRINYTDPWIEGDDKRTSRTIMVQ--NSRTPGT 455
RN+ G N+ L S+ Q D F++ Y P+++G D +RT+ V NSR
Sbjct: 476 RNLQGLNRSLTGSVTTSNFLNPQDDLAFKMEYAHPYLDGVDNPRNRTLRVSCFNSRKLSP 535
Query: 456 HVHGNQ--PDNSSLTIGRVTAGMEFSRPIRPKWSGTVGLIFQHSGARDE------KGNPI 507
G + S+ + R + + T GL+ + RDE G +
Sbjct: 536 VFTGGPGVDEVPSIWVDRAGVKANITENFSRQSKFTYGLVMEEIITRDESNHICSNGQRV 595
Query: 508 IKDFYSS----PLTASGKTNDEMLIAKF----ESVYTGSGDQGSSMFVFNMEQGLPVWPE 559
+ + S P T SG D M + ++ +G S +F ++QGL V
Sbjct: 596 LPNGAISADGPPTTLSGTGIDRMAFLQANITRDNTRFVNGTIVGSRNMFQVDQGLGVGSN 655
Query: 560 WLFFNRVNARARK-----GVEIG-----PARLLLSLSGGHVVGNFSPHEAFAIGGTNSVR 609
+ FFNR K VE G P L+L G VG+ ++AF +GG SVR
Sbjct: 656 FPFFNRHQLTVTKFLQLMSVEEGAGKSPPPVLVLHGHYGGCVGDLPSYDAFTLGGPYSVR 715
Query: 610 GYEEGAVGSGRSYVVGSGEISFPMLGPVEGVIFSDYGTDLGSGPSVPGDPAGARLKPGSG 669
GY G +G+ R+ + + EI P+ G F+++GTDLGS V G+P + G G
Sbjct: 716 GYNMGEIGAARNILELAAEIRIPIKG-THVYAFAEHGTDLGSSKDVKGNPTVVYRRMGQG 774
Query: 670 YGYGFGIRVDSPLGPLRLEYAFNDKQ---AKRFHFG 702
YG G++ LG +R EYA + A F FG
Sbjct: 775 SSYGAGMK----LGLVRAEYAVDHNSGTGAVFFRFG 806
>sp|Q9STE8|TC753_ARATH Protein TOC75-3, chloroplastic OS=Arabidopsis thaliana GN=TOC75-3
PE=1 SV=1
Length = 818
Score = 119 bits (297), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 147/586 (25%), Positives = 240/586 (40%), Gaps = 81/586 (13%)
Query: 182 DVHRIIDSGYFCSCMPVAVDT--RDGIRLVFQVEPNQEFHGLVCEG-ANVLPTKF---VE 235
D R I+ G P+ +D+ D +L + +++ + +LP V
Sbjct: 252 DRFRCINVGLMVQSKPIEMDSDMTDKEKLEYYRSLEKDYKRRIDRARPCLLPAPVYGEVM 311
Query: 236 DAFRDGYGKVVNIRRLDEVITSINGWYMERGL-------FGMVSGVEILSGGIIRLQVAE 288
RD GKV + R L + + WY + G FG ++ E++ +V E
Sbjct: 312 QMLRD-QGKV-SARLLQRIRDRVQKWYHDEGYACAQVVNFGNLNTKEVVC------EVVE 363
Query: 289 AEVNNISIRFLDRKTGEPTKGKTRPETILRQL--TTKKGQVYSMLQGKRDVETVLTMGIM 346
++ + I+F D K G +G T+ + R+L ++G V+++ GK+ + + ++G+
Sbjct: 364 GDITQLVIQFQD-KLGNVVEGNTQVPVVRRELPKQLRQGYVFNIEAGKKALSNINSLGLF 422
Query: 347 EDVSIIPQPAGDTGK---VDLIMNVVERPSGGFSAGGGISSGITSGPLSGLI---GSFAY 400
++ + P+P V++ + +E+ S S I G P GS +
Sbjct: 423 SNIEVNPRPDEKNEGGIIVEIKLKELEQKSAEVSTEWSIVPGRGGAPTLASFQPGGSVTF 482
Query: 401 SHRNVFGRNQKLNISLERG-----QIDSIFRINYTDPWIEGDDKRTSRTIMVQ--NSR-- 451
HRN+ G N+ L S+ Q D F++ Y P+++G +RT NSR
Sbjct: 483 EHRNLQGLNRSLMGSVTTSNFLNPQDDLSFKLEYVHPYLDGVYNPRNRTFKTSCFNSRKL 542
Query: 452 ----TPGTHVHGNQPDNSSLTIGRVTAGMEFSRPIRPKWSGTVGLIFQHSGARDE----- 502
T G V P + + R + + T GL+ + RDE
Sbjct: 543 SPVFTGGPGVEEVPP----IWVDRAGVKANITENFTRQSKFTYGLVMEEITTRDESSHIA 598
Query: 503 -KGNPIIKDFYSS----PLTASGKTNDEML-----IAKFESVYTGSGDQGSSMFVFNMEQ 552
G ++ S P T SG D M I + + + G VF ++Q
Sbjct: 599 ANGQRLLPSGGISADGPPTTLSGTGVDRMAFLQANITRDNTKFVNGAVVGQRT-VFQVDQ 657
Query: 553 GLPVWPEWLFFNRVNARARKGVEIG----------PARLLLSLSGGHVVGNFSPHEAFAI 602
GL + ++ FFNR K +++ P L+L G VG+ ++AF +
Sbjct: 658 GLGIGSKFPFFNRHQLTMTKFIQLREVEQGAGKSPPPVLVLHGHYGGCVGDLPSYDAFVL 717
Query: 603 GGTNSVRGYEEGAVGSGRSYVVGSGEISFPMLGPVEGVIFSDYGTDLGSGPSVPGDPAGA 662
GG SVRGY G +G+ R+ EI P+ F ++G DLGS V G+P
Sbjct: 718 GGPYSVRGYNMGELGAARNIAEVGAEIRIPVKN-THVYAFVEHGNDLGSSKDVKGNPTAV 776
Query: 663 RLKPGSGYGYGFGIRVDSPLGPLRLEYAF---NDKQAKRFHFGVGY 705
+ G G YG G++ LG +R EYA N A F FG Y
Sbjct: 777 YRRTGQGSSYGAGVK----LGLVRAEYAVDHNNGTGALFFRFGERY 818
>sp|Q84Q83|TOC75_ORYSJ Protein TOC75, chloroplastic OS=Oryza sativa subsp. japonica
GN=TOC75 PE=2 SV=2
Length = 817
Score = 114 bits (285), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 123/491 (25%), Positives = 210/491 (42%), Gaps = 57/491 (11%)
Query: 246 VNIRRLDEVITSINGWYMERGLF-GMVSGVEILSGGIIRLQVAEAEVNNISIRFLDRKTG 304
V+ R L + + WY G V L+ + +V E ++ + +F D K G
Sbjct: 318 VSARLLQRIRDHVQKWYHNEGFVCAQVVNFGNLNTSEVVCEVVEGDITKVEYQFQD-KLG 376
Query: 305 EPTKGKTRPETILRQL--TTKKGQVYSMLQGKRDVETVLTMGIMEDVSIIPQPAGDTGK- 361
+G T+ I R+L + G ++++ GK+ ++ + ++ + ++ + P+P D K
Sbjct: 377 NFVEGNTQIPIIDRELPQQLRPGHIFNIGAGKQALKNINSLALFSNIEVNPRP--DETKE 434
Query: 362 ----VDLIMNVVERPSGGFSAGGGISSGITSGPLSGLI---GSFAYSHRNVFGRNQKL-- 412
V++ + +E S S I G P I G+ ++ HRN++G N+ +
Sbjct: 435 GGIVVEIKLKELEPKSAEVSTEWSIVPGREGRPTLASIQPGGTVSFEHRNIYGLNRSIVG 494
Query: 413 ---NISLERGQIDSIFRINYTDPWIEG-DDKRTSRTIMVQ--NSR--TPGTHVHGNQPDN 464
+ +L Q D F++ Y P+++G DD+ +RT N+R +P N +
Sbjct: 495 SVTSSNLLNPQDDLSFKLEYVHPYLDGVDDRNKNRTFKTSCFNTRKLSPVFVAGPNMDEA 554
Query: 465 SSLTIGRVTAGMEFSRPIRPKWSGTVGLIFQHSGARDEKGNPIIK----------DFYSS 514
+ + RV + + T GL+ + RDE +
Sbjct: 555 PPVWVDRVGFKANITESFTRQSKFTYGLVVEEITTRDETNSICTHGSRAMPSGGLSMDGP 614
Query: 515 PLTASGKTNDEML-----IAKFESVYTGSGDQGSSMFVFNMEQGLPVWPEWLFFNRVNAR 569
P T SG D M I + + + G +F ++QGL + + FFNR
Sbjct: 615 PTTLSGTGIDRMAFLQANITRDNTEFVNGAVIGDRC-IFQLDQGLGIGSKNPFFNRHQLT 673
Query: 570 ARKGVEIG----------PARLLLSLSGGHVVGNFSPHEAFAIGGTNSVRGYEEGAVGSG 619
K V + PA L+L VG+ ++AF +GG SVRGY G +G+
Sbjct: 674 LTKFVNLNKQEKGAGKPLPAVLVLHGHYAGCVGDLPSYDAFTLGGPYSVRGYGMGELGAS 733
Query: 620 RSYVVGSGEISFPMLGP-VEGVIFSDYGTDLGSGPSVPGDPAGARLKPGSGYGYGFGIRV 678
R+ + + E+ P+ V G F ++GTDLGS V G+P + G G YG G++
Sbjct: 734 RNVLEVASELRIPVRNTYVYG--FVEHGTDLGSSKDVKGNPTEFFRRVGHGSSYGLGVK- 790
Query: 679 DSPLGPLRLEY 689
LG +R EY
Sbjct: 791 ---LGLVRGEY 798
>sp|P0C891|OEP80_PEA Outer envelope protein 80, chloroplastic (Fragments) OS=Pisum
sativum GN=OEP80 PE=1 SV=1
Length = 158
Score = 91.3 bits (225), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 90/274 (32%), Positives = 100/274 (36%), Gaps = 156/274 (56%)
Query: 283 RLQVAEAEVNNISIRFLDRKTGEPTKGKTRPETILRQLTTKKGQVYSMLQGKRDVETVLT 342
+LQV+EAEVNNISIRFLDRK
Sbjct: 11 KLQVSEAEVNNISIRFLDRK---------------------------------------- 30
Query: 343 MGIMEDVSIIPQPAGDTGKVDLIMNVVERPSGGFSAGGGISSGITSGPLSGLIGSFAYSH 402
SI+PQPA VDLI+ GLIGSFAYSH
Sbjct: 31 -------SIVPQPAQTA--VDLIVR-------------------------GLIGSFAYSH 56
Query: 403 RNVFGRNQKLNISLERGQIDSIFRINYTDPWIEGDDKRTSRTIMVQNSRTPGTHVHGNQP 462
R LN+SLER TPGT VHGNQ
Sbjct: 57 R--------LNLSLER---------------------------------TPGTLVHGNQD 75
Query: 463 DNSSLTIGRVTAGMEFSRPIRPKWSGTVGLIFQHSGARDEKGNPIIKDFYSSPLTASGKT 522
NS+LTIGR WSGT GLIFQ Y+SPLTASG T
Sbjct: 76 GNSNLTIGR--------------WSGTAGLIFQR---------------YNSPLTASGNT 106
Query: 523 NDEMLIAKFESVYTGSGDQGSSMFVFNMEQGLPV 556
+ E L+AK S+ EQGLPV
Sbjct: 107 HTETLLAK------------SATLELTDEQGLPV 128
>sp|Q5IZC8|TC754_ARATH Protein TOC75-4, chloroplastic OS=Arabidopsis thaliana GN=TOC75-4
PE=2 SV=1
Length = 396
Score = 75.5 bits (184), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 76/154 (49%), Gaps = 15/154 (9%)
Query: 547 VFNMEQGLPVWPEWLFFNRVNARAR-----KGVEIG-----PARLLLSLSGGHVVGNFSP 596
+F ++QGL + + FNR K VE G P L+L G +G+
Sbjct: 230 IFQVDQGLGIGNNFPLFNRHQLSLTSFIQLKQVEEGSDKPQPPVLVLHGRYGGCIGDLPS 289
Query: 597 HEAFAIGGTNSVRGYEEGAVGSGRSYVVGSGEISFPMLGPVEGVIFSDYGTDLGSGPSVP 656
++ FA+GG NSVRGY G +G+ ++ + EI P+ F+++G DLGS V
Sbjct: 290 YDVFALGGPNSVRGYSMGELGAAKNILELGAEIRIPVKN-THVYAFAEHGNDLGSSKDVK 348
Query: 657 GDPAGARLKPGSGYGYGFGIRVDSPLGPLRLEYA 690
G+P G K G G YG G++ LG +R EY
Sbjct: 349 GNPTGLYRKMGHGSSYGLGVK----LGMVRAEYT 378
>sp|Q9K1H0|BAMA_NEIMB Outer membrane protein assembly factor BamA OS=Neisseria
meningitidis serogroup B (strain MC58) GN=bamA PE=1 SV=1
Length = 797
Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 112/470 (23%), Positives = 168/470 (35%), Gaps = 109/470 (23%)
Query: 310 KTRPETILRQLTTKKGQVYSMLQGKRDVETVLTMGIMEDVSIIPQP-AGDTGKVDLIMNV 368
KTR E + R+L + Y + +R E V +G ++V P AG KVDL M++
Sbjct: 359 KTRDEVVRRELRQMESAPYDTSKLQRSKERVELLGYFDNVQFDAVPLAGTPDKVDLNMSL 418
Query: 369 VERPSGGFSAGGGISSGITSGPLSGLIGSFAYSHRNVFGRNQKLNISLERGQIDSIFRIN 428
ER +G G +GL+ S S N+FG + + R + ++
Sbjct: 419 TERSTGSLDLSAGWVQD------TGLVMSAGVSQDNLFGTGKSAALRASRSKTTLNGSLS 472
Query: 429 YTDPWIEGDDKRTSRTIMVQNSRTPGTHVHGN--QPDNSSLTIGRVT-----AGMEFSRP 481
+TDP+ D + G V+G P +S +I + AG+ S P
Sbjct: 473 FTDPYFTAD------------GVSLGYDVYGKAFDPRKASTSIKQYKTTTAGAGIRMSVP 520
Query: 482 IRPKWSGTVGLIFQHSGARDEKGNPIIKDFYSSPLTASGKTNDEMLIAKFESVYTGSGDQ 541
+ GL+ +H P Y+ + GKT+ + + G +
Sbjct: 521 VTEYDRVNFGLVAEHLTVNTYNKAP---KHYADFIKKYGKTDGT------DGSFKGWLYK 571
Query: 542 GSSMFVFNMEQGLPVWPEWLFFNRVNARARKGVEIG-PARLLLSLSGGHVVGNFSP---- 596
G+ + N +WP + VNA EI P L S H F P
Sbjct: 572 GTVGWGRNKTDS-ALWPTRGYLTGVNA------EIALPGSKLQYYSATHNQTWFFPLSKT 624
Query: 597 -----------------------HEAFAIGGTNSVRGYEEGAVG-------------SGR 620
E F GG SVRGYE G +G G
Sbjct: 625 FTLMLGGEVGIAGGYGRTKEIPFFENFYGGGLGSVRGYESGTLGPKVYDEYGEKISYGGN 684
Query: 621 SYVVGSGEISFPMLGP-----VEGVIFSDYGT--DLGSGPSVPGDPAGARLKP--GSG-- 669
S E+ FPM G V +F+D G+ D + G R++ G+G
Sbjct: 685 KKANVSAELLFPMPGAKDARTVRLSLFADAGSVWDGKTYDDNSSSATGGRVQNIYGAGNT 744
Query: 670 ----------YGYGFGIRVDSPLGPLRLEYAFNDKQA-----KRFHFGVG 704
Y G + SPLGP++ YA+ K+ +RF F +G
Sbjct: 745 HKSTFTNELRYSAGGAVTWLSPLGPMKFSYAYPLKKKPEDEIQRFQFQLG 794
Score = 38.5 bits (88), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 81/205 (39%), Gaps = 47/205 (22%)
Query: 280 GIIRLQVAEAEVNNISIRFLDRKTGEPTKGKTRPETILRQLTTKKGQVYSMLQGKRDVET 339
GI L +A+ + +I + L R T P T+ L K G Y+ G +++
Sbjct: 14 GISPLALADFTIQDIRVEGLQR---------TEPSTVFNYLPVKVGDTYNDTHGSAIIKS 64
Query: 340 VLTMGIMEDVSIIPQPAGDTGKVDLIMNVVERPS-GGFSAGGGISSGITSGPLSGLIGSF 398
+ G +DV + +T L++ V+ERP+ G + G + + + + + SF
Sbjct: 65 LYATGFFDDVRV------ETADGQLLLTVIERPTIGSLNITG--AKMLQNDAIKKNLESF 116
Query: 399 AYSHRNVFGR---NQ-------------KLNI-------SLERGQIDSIFRIN------Y 429
+ F + NQ KLNI L R ++D I+
Sbjct: 117 GLAQSQYFNQATLNQAVAGLKEEYLGRGKLNIQITPKVTKLARNRVDIDITIDEGKSAKI 176
Query: 430 TDPWIEGDDKRTSRTIMVQNSRTPG 454
TD EG+ + R +M Q S T G
Sbjct: 177 TDIEFEGNQVYSDRKLMRQMSLTEG 201
>sp|P0ADE4|TAMA_ECOLI Translocation and assembly module TamA OS=Escherichia coli (strain
K12) GN=tamA PE=1 SV=1
Length = 577
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 56/122 (45%), Gaps = 24/122 (19%)
Query: 596 PHEAFAIGGTNSVRGYE---------EGAVGSGRSYVVGSGEISFPMLGPVEGVIFSDYG 646
P F GG S+RGY+ G + + GS E + + G G +F D
Sbjct: 464 PDLRFFAGGDRSIRGYKYKSIAPKYANGDLKGASKLITGSLEYQYNVTGKWWGAVFVD-- 521
Query: 647 TDLGSGPSVPGDPAGARLKPGSGYGYGFGIRVDSPLGPLRLEYAF----NDKQAKRFHFG 702
SG +V D + K G+G G+R +SP+GP++L++A D+ +F+ G
Sbjct: 522 ----SGEAV-SDIRRSDFKTGTG----VGVRWESPVGPIKLDFAVPVADKDEHGLQFYIG 572
Query: 703 VG 704
+G
Sbjct: 573 LG 574
>sp|P0ADE5|TAMA_ECO57 Translocation and assembly module TamA OS=Escherichia coli O157:H7
GN=tamA PE=3 SV=1
Length = 577
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 56/122 (45%), Gaps = 24/122 (19%)
Query: 596 PHEAFAIGGTNSVRGYE---------EGAVGSGRSYVVGSGEISFPMLGPVEGVIFSDYG 646
P F GG S+RGY+ G + + GS E + + G G +F D
Sbjct: 464 PDLRFFAGGDRSIRGYKYKSIAPKYANGDLKGASKLITGSLEYQYNVTGKWWGAVFVD-- 521
Query: 647 TDLGSGPSVPGDPAGARLKPGSGYGYGFGIRVDSPLGPLRLEYAF----NDKQAKRFHFG 702
SG +V D + K G+G G+R +SP+GP++L++A D+ +F+ G
Sbjct: 522 ----SGEAV-SDIRRSDFKTGTG----VGVRWESPVGPIKLDFAVPVADKDEHGLQFYIG 572
Query: 703 VG 704
+G
Sbjct: 573 LG 574
>sp|C6V5K2|BAMA_NEORI Outer membrane protein assembly factor BamA OS=Neorickettsia
risticii (strain Illinois) GN=bamA PE=3 SV=1
Length = 738
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 90/421 (21%), Positives = 160/421 (38%), Gaps = 70/421 (16%)
Query: 301 RKTGEPTKGKTRPETILRQLTTKKGQVYSMLQGKRDVETVLTMGIMEDVSIIPQPAGDTG 360
RK +T+ I R++ + +Y + +L +G ++V I + D
Sbjct: 335 RKINISGNTRTKDTVIRREMLLSENDLYQPSKVADSRRRILNLGFFDEV-YIEEHKIDGQ 393
Query: 361 KVDLIMNVVERPSGGFSAGGGISSGITSGPLSGLIGSFAYSHRNVFGRNQKLNISLERGQ 420
+ L + V ERP+G + GG S + G G+F++ N+FG + +L + L++
Sbjct: 394 NLILEVRVKERPTGTLNLSGGYGSDV------GFFGNFSFVENNLFGTSDRLVVELQKAS 447
Query: 421 IDSIFRINYTDPWIEGDDKRTSRTIMVQNSRTPGTHV---HGNQPDNSSLTIGRVTAGME 477
+ S NY+ +E KR T + T G V + N+ N V
Sbjct: 448 LGS----NYS---MEFQRKRIFDTFI-----TAGASVFYKNRNEKANGLYKFSSVGGDGS 495
Query: 478 FSRPIRPKWSGTVGLIFQHSGARDEKGNPIIKDFYSSPLTASGKTNDEMLIAKFESVYTG 537
S +R +G D +G+ +P + ++L A S++
Sbjct: 496 VSYSLRDDLRLHLGYSLSFDKIFDVEGD--------APESVKSSAGTKILSAVSYSLFLN 547
Query: 538 SGDQGSSMFVFNMEQGLPVWPEW------LFFNRVNARARKGVEIGPARLLLSL--SGGH 589
D + FV G+ ++ + F R + +A V + +LSL G+
Sbjct: 548 KLD---NYFVPRYGYGVRFGNKFAGIGGDVKFLRSDFKAGGFVSVFDQSAVLSLIVRAGN 604
Query: 590 VVG----NFSPHEAFAIGGTNSVRGYEEGAVG----------SGRSYVVGSGEISFPMLG 635
+ G F + N +RG++ +G G +++G+ E+ PM
Sbjct: 605 IFGYSGQGVDVANRFFL---NEMRGFDNLGIGPRDVETDDALGGNFFILGTAEVQVPMRL 661
Query: 636 PVE----GVIFSDYGTDLGSGPSVPG--DPAGARLKPGSGYGYGFGIRVDSPLGPLRLEY 689
PVE F + GT G + D R G+G + +SP G LR++
Sbjct: 662 PVELDLKAAFFYEVGTLTGVDVTTEKVYDSHALRSSVGAGLVW------NSPFGVLRVDV 715
Query: 690 A 690
A
Sbjct: 716 A 716
>sp|E1WAU4|TAMA_SALTS Translocation and assembly module TamA OS=Salmonella typhimurium
(strain SL1344) GN=tamA PE=3 SV=1
Length = 577
Score = 43.1 bits (100), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 55/122 (45%), Gaps = 24/122 (19%)
Query: 596 PHEAFAIGGTNSVRGYE---------EGAVGSGRSYVVGSGEISFPMLGPVEGVIFSDYG 646
P F GG S+RGY+ +G + GS E + + G G +F D
Sbjct: 464 PDLRFFAGGDRSIRGYKYKSISPKDSDGNLKGASKLATGSLEYQYNVTGKWWGAVFVD-- 521
Query: 647 TDLGSGPSVPGDPAGARLKPGSGYGYGFGIRVDSPLGPLRLEYAF----NDKQAKRFHFG 702
SG +V D + K G+G G+R SP+GP++L++A D+ +F+ G
Sbjct: 522 ----SGEAV-SDIRRSDFKTGTG----VGVRWASPVGPVKLDFAVPVGDKDEHGLQFYIG 572
Query: 703 VG 704
+G
Sbjct: 573 LG 574
>sp|D2TN56|TAMA_CITRI Translocation and assembly module TamA OS=Citrobacter rodentium
(strain ICC168) GN=tamA PE=1 SV=1
Length = 577
Score = 42.4 bits (98), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 54/122 (44%), Gaps = 24/122 (19%)
Query: 596 PHEAFAIGGTNSVRGYE---------EGAVGSGRSYVVGSGEISFPMLGPVEGVIFSDYG 646
P F GG S+RGY+ G + GS E + + G G +F D
Sbjct: 464 PDLRFFAGGDRSIRGYKYKSISPKDSNGDLKGASKLATGSLEYQYNVTGKWWGAVFVD-- 521
Query: 647 TDLGSGPSVPGDPAGARLKPGSGYGYGFGIRVDSPLGPLRLEYAF----NDKQAKRFHFG 702
SG +V D + K G+G G+R SP+GP++L++A D+ +F+ G
Sbjct: 522 ----SGEAV-SDIRRSDFKTGAG----VGVRWQSPVGPIKLDFAAPIGDKDEHGLQFYIG 572
Query: 703 VG 704
+G
Sbjct: 573 LG 574
>sp|P46278|CCNB2_MEDSV G2/mitotic-specific cyclin-2 OS=Medicago sativa subsp. varia PE=2
SV=1
Length = 434
Score = 35.4 bits (80), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 57/124 (45%), Gaps = 13/124 (10%)
Query: 150 EELERKDLETEALTALKACRANSALTVREVQEDVHRIIDSGYFCSCM-PVAVDTRDGIRL 208
EE+E +D+E E + + +C AN++L V E ED+H + C+ P +D
Sbjct: 147 EEVEMEDIEGEMILDIDSCDANNSLAVVEYIEDLHAYYRKIEYLGCVSPTYMDE------ 200
Query: 209 VFQVEPNQEFHGLVCEGANVLPTKFVEDAFRDGYGKVVNIRRLDEVITSINGWYMERGLF 268
Q++ N+ ++ + + KF D ++ VN+ +D + N + L
Sbjct: 201 --QLDLNERMRAILVDWLIEVHDKF--DLMQETLFLTVNL--IDRFLAKQNVVRKKLQLV 254
Query: 269 GMVS 272
G+V+
Sbjct: 255 GLVA 258
>sp|Q729H8|BAMA_DESVH Outer membrane protein assembly factor BamA OS=Desulfovibrio
vulgaris (strain Hildenborough / ATCC 29579 / NCIMB
8303) GN=bamA PE=3 SV=1
Length = 791
Score = 35.0 bits (79), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 38/90 (42%)
Query: 179 VQEDVHRIIDSGYFCSCMPVAVDTRDGIRLVFQVEPNQEFHGLVCEGANVLPTKFVEDAF 238
+ +++ RI D GYF DG LV+ V +V EG++ + + A
Sbjct: 94 INKEIKRIWDLGYFSDVQASVEQGGDGTVLVYTVTEKPRIDNIVIEGSDKVGHDDILAAM 153
Query: 239 RDGYGKVVNIRRLDEVITSINGWYMERGLF 268
G V+N + L + + + Y + G +
Sbjct: 154 SSKTGSVLNDKLLAQDLQKVTELYRKEGFY 183
Score = 34.7 bits (78), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 102/435 (23%), Positives = 163/435 (37%), Gaps = 84/435 (19%)
Query: 310 KTRPETILRQLTTKKGQVYSMLQGKRDVETVLTMGIMEDVSIIPQPAGDTGKVDLIMNVV 369
KTR +LR++ G ++ + +R E + V P +VDL + V
Sbjct: 398 KTRDNVVLREMRIADGDMFEGAKLRRSNERLNRTRYFSQVDTELVPTQKEDEVDLKVKVK 457
Query: 370 ERPSGGFSAGGGISSGITSGPLSGLIGSFAYSHRNVFGRNQKLNISLERGQIDSIFRINY 429
E+ +G G G S+ G +SG I RN+FG+ ++ + F ++
Sbjct: 458 EQNTGALIGGVGYSTFYQFG-VSGTI-----MERNLFGKGYYASLQAFFSGKRNSFIASF 511
Query: 430 TDPWIE------GDDKRTSRTIMVQNSRTPGTHVHGNQPDNSSLTIGRVTAGMEFSRPIR 483
T+P + G+D SR D S TIG + F+ P+
Sbjct: 512 TNPRVNDGDLSFGNDAYISREYF---------------DDFSKNTIGDT---IRFALPV- 552
Query: 484 PKWSGTVGLIFQHSGAR----DEKGNPIIKDFYSSPLTASGKTNDEMLIAKFESVYTGSG 539
++S TVG ++ D+ IIK+ G+ + +F T S
Sbjct: 553 GEYS-TVGWGYRLDRYELYDIDDDAAKIIKE-------REGENISSVAHVRFTRDTTDSK 604
Query: 540 D---QGSSMFVFNMEQGLPVWPEWLFFNRVNARARKGVEIGPARLLLSLSGGHVV----- 591
+ +G+ FN G P+ + F V + ++ P +L + G V
Sbjct: 605 EKPTKGTIFKTFNEFGGGPIGGDDDFIKPV-VEFQAYHQLAPNHVLHGRTRGGAVLENGQ 663
Query: 592 GNFSPHEAFAIGGTNSVRGYEEGAVG-----SGRSYVVGSGEISF----------PMLGP 636
G+ E F IGG +S+RGY + SG +G ++F P LG
Sbjct: 664 GDVPVFERFYIGGIDSIRGYNSRDISPRDPESGDR--IGGDRMAFVNLEYIWVFKPDLG- 720
Query: 637 VEGVIFSDYGTDLGSGPSVPGDPAGARLKPGSGYGYGFGIRVDSPLGPLRLEYAF----- 691
+ V F D G + S D LK G +R SP+G LR Y F
Sbjct: 721 LALVPFFDMGINYDSSAEFNWDD---ELKKSV----GLEMRWRSPMGDLRFAYGFPLDEG 773
Query: 692 --NDKQAKRFHFGVG 704
++ + RF F +G
Sbjct: 774 RDGEQHSGRFEFSMG 788
>sp|Q8K9S5|BAMA_BUCAP Outer membrane protein assembly factor BamA OS=Buchnera aphidicola
subsp. Schizaphis graminum (strain Sg) GN=bamA PE=3 SV=1
Length = 799
Score = 34.3 bits (77), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 68/343 (19%), Positives = 130/343 (37%), Gaps = 53/343 (15%)
Query: 311 TRPETILRQLTTKKGQVYSMLQGKRDVETVLTMGIMEDVSIIPQPAGDTGK-VDLIMNVV 369
T+ + R++ +G+ +++ + ++++ + + D+++ + + VD+ +
Sbjct: 360 TQDIVLRREMKQIEGEWFNLKLIELGIKSLEKLKFLSDITVQKEILFNKENGVDITYTLK 419
Query: 370 ERPSGGFSAGGGISSGITSGPLSGLIGSFAYSHRNVFGRNQKLNISLERGQIDSIFRINY 429
E+P+G + G G G SGL + + S N+FG L S+ + I+
Sbjct: 420 EQPTGTLNFGLG------YGRDSGLSFNASISQDNLFGSGNSLKASIIKNDNQKYADISI 473
Query: 430 TDPWIEGDDKRTSRTIMVQNSRTPGTHVHGNQPDNSSLTIGRVTAGME--FSRPIRPKWS 487
P+ D I + + NS I + T+G E S I
Sbjct: 474 MHPYFIDDGTNLDTRIFYNDFKYNI---------NSFYNIVKTTSGFESDLSFLINAFNR 524
Query: 488 GTVGLIFQHSGA--RDEK-----GNPIIKDFYSSPLTASGKTNDEMLIAKFESVYT-GSG 539
+G + H+G ++EK GN F + L N + + Y SG
Sbjct: 525 VNIGFGYTHNGLLNKEEKFFSKNGNKSSDKFLKTSLVDDFTLNYSLTHDTLKYFYFPISG 584
Query: 540 DQ----------GSS----MFVFNMEQGLPVWPEWLFFNRVNARARKGVEIGPARLLLSL 585
+Q GS F+F+ EQ +P+ E F + RA G + +L
Sbjct: 585 NQTYISGKNTIPGSDNKFYKFLFDSEQYIPLEEEKKFIFLTHIRAGIGNSLNKEKLPF-- 642
Query: 586 SGGHVVGNFSPHEAFAIGGTNSVRGYEEGAVGSGRSYVVGSGE 628
+E F +N++RG+ +G + Y+ + E
Sbjct: 643 -----------YENFHAIDSNNIRGFRANTIGPKKIYINSNLE 674
>sp|P30278|CCNB2_MEDSA G2/mitotic-specific cyclin-2 (Fragment) OS=Medicago sativa PE=2
SV=1
Length = 328
Score = 34.3 bits (77), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 148 DGEELERKDLETEALTALKACRANSALTVREVQEDVHRIIDSGYFCSCM-PVAVDTR 203
+ EE+E +D+E E + + +C AN++L V E ED+H + C+ P +D +
Sbjct: 39 EMEEVEMEDIEGEMILDIDSCDANNSLAVVEYIEDLHAYYRKIEYLGCVSPTYMDEQ 95
>sp|C4Y3C1|VPS10_CLAL4 Vacuolar protein sorting/targeting protein 10 OS=Clavispora
lusitaniae (strain ATCC 42720) GN=VPS10 PE=3 SV=1
Length = 1525
Score = 33.9 bits (76), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 38/87 (43%), Gaps = 12/87 (13%)
Query: 578 PARLLLSLSGGHVVGNFSPHEAFAIGGTNSVRGYEEGAV----GSGRSYVVG-------- 625
P+ + + SPH F T+S G+E+GA+ +G YV+
Sbjct: 915 PSDFKIEAQTAFTILESSPHSIFMHVTTDSTSGHEKGAILKSNSNGTYYVLSLSDVNRNE 974
Query: 626 SGEISFPMLGPVEGVIFSDYGTDLGSG 652
G + + LG +EGV+ ++ TD G
Sbjct: 975 VGYVDYDRLGLLEGVLIANTATDSKEG 1001
>sp|P34616|CADH3_CAEEL Cadherin-3 OS=Caenorhabditis elegans GN=cdh-3 PE=2 SV=1
Length = 3343
Score = 33.1 bits (74), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 56/126 (44%), Gaps = 12/126 (9%)
Query: 251 LDEVITSINGWYMERGLFGMVSGVEILSGGIIRLQVAEAEVNNISIRFLDRKTGEPTKGK 310
LD + + ++ ++ +FG +EI G+I L E N +IR D + P K
Sbjct: 1390 LDAIASDVSFSIVDGDVFG---NLEIEDSGVISLNSIPNESFNATIRIYDNR--PPFKVH 1444
Query: 311 TRPETILRQLTTKKGQV------YSMLQGKRDVETVLTMGIMEDVSIIPQPAGDTGKVDL 364
TI Q+T K V + M G DV ++ I+ I+PQ D+ K+D
Sbjct: 1445 FDDVTIEFQVTQKLRAVTCEDAEFWMFFGNEDVGMLIASEIVT-WRIVPQIGSDSFKIDP 1503
Query: 365 IMNVVE 370
I +++
Sbjct: 1504 ITGIIQ 1509
>sp|Q3AFC6|HPPA_CARHZ Putative K(+)-stimulated pyrophosphate-energized sodium pump
OS=Carboxydothermus hydrogenoformans (strain Z-2901 /
DSM 6008) GN=hppA PE=1 SV=1
Length = 686
Score = 32.7 bits (73), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 40/91 (43%), Gaps = 14/91 (15%)
Query: 344 GIMEDVSIIPQPAGDTGKVDLIMNVVERPSGGFSAGGGISSGITSGPLSGLIGSFAYSHR 403
GI E + P+ T K+D + N + GF+ G S L+ L AY+
Sbjct: 434 GIAEMAELGPEIRNKTDKLDAVGNTTAAVAKGFAIG--------SAALTALALFSAYTDL 485
Query: 404 NVFGRNQKLNISLERGQIDSIFRINYTDPWI 434
K N +L++ ++ F +N TDPW+
Sbjct: 486 ------AKTNPNLQKYLVNGKFDLNITDPWV 510
>sp|Q21TN3|AROC_RHOFD Chorismate synthase OS=Rhodoferax ferrireducens (strain DSM 15236 /
ATCC BAA-621 / T118) GN=aroC PE=3 SV=1
Length = 364
Score = 32.7 bits (73), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 56/135 (41%), Gaps = 13/135 (9%)
Query: 494 FQHSGARDEKGNPIIKDFYSSPLTASGKTNDEMLIAKFESVYTGSGDQ-GSSMFVFNMEQ 552
+Q G RD +G ++P+ A+G + L + +V+ G Q G F
Sbjct: 112 YQKYGIRDPRGGGRSSARLTAPMVAAGAVAKKWLFEHYGTVFRGCMTQIGELPITFESWD 171
Query: 553 GLPVWPEWLFFNRVNARA------RKGVEIGPARLLLSLS------GGHVVGNFSPHEAF 600
+P P + V+A A RK + AR+ +S S G + A+
Sbjct: 172 FVPDNPFFAPIADVSALASYMEVLRKAGDSCGARIRVSASNVPVGLGEPLFDKLDADIAY 231
Query: 601 AIGGTNSVRGYEEGA 615
A+ G N+V+G E GA
Sbjct: 232 AMMGINAVKGVEIGA 246
>sp|A9XE49|IL17L_CRAGI Interleukin 17-like protein OS=Crassostrea gigas PE=2 SV=1
Length = 200
Score = 32.7 bits (73), Expect = 9.9, Method: Composition-based stats.
Identities = 19/72 (26%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
Query: 68 LYGKSVRICSTCLSMTGAVDTLVNFPLLCSASLSLNQSSAEFPAQSELSTQLQQKAQQPH 127
L+ ++ +CS + +TG D+ V +CS +L + +++ A + +S L+
Sbjct: 6 LFAMTLVVCSVIVLLTGVADSAV----ICSEPTNLAEQYSQYMANATVSNMLEYLESSTA 61
Query: 128 SVSRSDEERVLI 139
SDEE LI
Sbjct: 62 GGVASDEEEQLI 73
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.136 0.399
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 274,954,890
Number of Sequences: 539616
Number of extensions: 12707465
Number of successful extensions: 34213
Number of sequences better than 100.0: 43
Number of HSP's better than 100.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 31
Number of HSP's that attempted gapping in prelim test: 33855
Number of HSP's gapped (non-prelim): 333
length of query: 707
length of database: 191,569,459
effective HSP length: 125
effective length of query: 582
effective length of database: 124,117,459
effective search space: 72236361138
effective search space used: 72236361138
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 65 (29.6 bits)