BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005226
(707 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 166 bits (420), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 118/313 (37%), Positives = 172/313 (54%), Gaps = 36/313 (11%)
Query: 402 FELDELLRAS-----AYVLGKSGLGIVYKVVLGNGIPVAVRRLGE----GGEQRHREFVT 452
F L EL AS +LG+ G G VYK L +G VAV+RL E GGE +F T
Sbjct: 28 FSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGEL---QFQT 84
Query: 453 EVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGR-NGQPSTSLSWSTRL 511
EV+ I+ H N+++LR + P E+LL+ +++NG++A+ LR R QP L W R
Sbjct: 85 EVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPP--LDWPKRQ 142
Query: 512 RIAKGTARGLAYLHE-CSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSS 570
RIA G+ARGLAYLH+ C P K +H D+K +NILLD +F+ + DFGL++L++ +
Sbjct: 143 RIALGSARGLAYLHDHCDP-KIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXX 201
Query: 571 SGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELS 630
+ T + APE G + +K DV+ +GV+LLEL+TG+
Sbjct: 202 A---------------VRGTIGHIAPEYLSTG-KSSEKTDVFGYGVMLLELITGQRAFDL 245
Query: 631 PTTSTSIEVPDLVRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPE 690
+ +V L+ WV KG +E L +VD + LQ + +EV + +AL CT++ P
Sbjct: 246 ARLANDDDVM-LLDWV-KGLLKEKKLEALVD-VDLQGNYKDEEVEQLIQVALLCTQSSPM 302
Query: 691 VRPRMKNVSENLE 703
RP+M V LE
Sbjct: 303 ERPKMSEVVRMLE 315
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 165 bits (417), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 112/296 (37%), Positives = 168/296 (56%), Gaps = 31/296 (10%)
Query: 414 VLGKSGLGIVYKVVLGNGIPVAVRRLGE----GGEQRHREFVTEVQAIAKVKHPNIVKLR 469
+LG+ G G VYK L +G VAV+RL E GGE +F TEV+ I+ H N+++LR
Sbjct: 37 ILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGEL---QFQTEVEMISMAVHRNLLRLR 93
Query: 470 AYYWAPDEKLLISDFISNGNLANALRGR-NGQPSTSLSWSTRLRIAKGTARGLAYLHE-C 527
+ P E+LL+ +++NG++A+ LR R QP L W R RIA G+ARGLAYLH+ C
Sbjct: 94 GFCMTPTERLLVYPYMANGSVASCLRERPESQPP--LDWPKRQRIALGSARGLAYLHDHC 151
Query: 528 SPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQT 587
P K +H D+K +NILLD +F+ + DFGL++L++ + + + G + ++
Sbjct: 152 DP-KIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXA---VRGXIGHI----- 202
Query: 588 EKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVRWVK 647
APE G + +K DV+ +GV+LLEL+TG+ + +V L+ WV
Sbjct: 203 -------APEYLSTG-KSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVM-LLDWV- 252
Query: 648 KGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLE 703
KG +E L +VD LQ + +EV + +AL CT++ P RP+M V LE
Sbjct: 253 KGLLKEKKLEALVDVD-LQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 307
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 100/292 (34%), Positives = 146/292 (50%), Gaps = 26/292 (8%)
Query: 413 YVLGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYY 472
+++G G VYK VL +G VA++R Q EF TE++ ++ +HP++V L +
Sbjct: 45 FLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFC 104
Query: 473 WAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKF 532
+E +LI ++ NGNL L G + P+ S+SW RL I G ARGL YLH R
Sbjct: 105 DERNEMILIYKYMENGNLKRHLYGSD-LPTMSMSWEQRLEICIGAARGLHYLH---TRAI 160
Query: 533 VHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNN 592
+H D+K NILLD +F P I+DFG+S+ T + + + G L Y+
Sbjct: 161 IHRDVKSINILLDENFVPKITDFGISK--KGTELDQTHLXXVVKGTLGYID--------- 209
Query: 593 YRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVRWVKKGFEE 652
PE + G R +K DVYSFGVVL E+L +S + S E+ +L W +
Sbjct: 210 ---PEYFIKG-RLTEKSDVYSFGVVLFEVLCARS---AIVQSLPREMVNLAEWAVES-HN 261
Query: 653 ENPLSDMVDAMLLQEVHAKKEVIAVF-HLALACTEADPEVRPRMKNVSENLE 703
L +VD L ++ + E + F A+ C E RP M +V LE
Sbjct: 262 NGQLEQIVDPNLADKI--RPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 101/292 (34%), Positives = 147/292 (50%), Gaps = 26/292 (8%)
Query: 413 YVLGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYY 472
+++G G VYK VL +G VA++R Q EF TE++ ++ +HP++V L +
Sbjct: 45 FLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFC 104
Query: 473 WAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKF 532
+E +LI ++ NGNL L G + P+ S+SW RL I G ARGL YLH R
Sbjct: 105 DERNEMILIYKYMENGNLKRHLYGSD-LPTMSMSWEQRLEICIGAARGLHYLH---TRAI 160
Query: 533 VHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNN 592
+H D+K NILLD +F P I+DFG+S+ G +G ++ V + T
Sbjct: 161 IHRDVKSINILLDENFVPKITDFGISK-----------KGTELGQT--HLXXV-VKGTLG 206
Query: 593 YRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVRWVKKGFEE 652
Y PE + G R +K DVYSFGVVL E+L +S + S E+ +L W +
Sbjct: 207 YIDPEYFIKG-RLTEKSDVYSFGVVLFEVLCARS---AIVQSLPREMVNLAEWAVES-HN 261
Query: 653 ENPLSDMVDAMLLQEVHAKKEVIAVF-HLALACTEADPEVRPRMKNVSENLE 703
L +VD L ++ + E + F A+ C E RP M +V LE
Sbjct: 262 NGQLEQIVDPNLADKI--RPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 95/295 (32%), Positives = 145/295 (49%), Gaps = 33/295 (11%)
Query: 415 LGKSGLGIVYKVVLGNGIPVAVRRLGE----GGEQRHREFVTEVQAIAKVKHPNIVKLRA 470
+G+ G G+VYK + N VAV++L E+ ++F E++ +AK +H N+V+L
Sbjct: 39 MGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLG 97
Query: 471 YYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPR 530
+ D+ L+ ++ NG+L + L +G P LSW R +IA+G A G+ +LHE
Sbjct: 98 FSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPP--LSWHMRCKIAQGAANGINFLHE---N 152
Query: 531 KFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKT 590
+H DIK +NILLD F ISDFGL+R +S F + + T
Sbjct: 153 HHIHRDIKSANILLDEAFTAKISDFGLAR----------ASEKFAQTVM----XXRIVGT 198
Query: 591 NNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVRWVKKGF 650
Y APEA P K D+YSFGVVLLE++TG P E L+ ++
Sbjct: 199 TAYMAPEALRGEITP--KSDIYSFGVVLLEIITG-----LPAVDEHREPQLLLDIKEEIE 251
Query: 651 EEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERI 705
+EE + D +D + E A++ +A C RP +K V + L+ +
Sbjct: 252 DEEKTIEDYIDKKMNDADSTSVE--AMYSVASQCLHEKKNKRPDIKKVQQLLQEM 304
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 95/295 (32%), Positives = 145/295 (49%), Gaps = 33/295 (11%)
Query: 415 LGKSGLGIVYKVVLGNGIPVAVRRLGE----GGEQRHREFVTEVQAIAKVKHPNIVKLRA 470
+G+ G G+VYK + N VAV++L E+ ++F E++ +AK +H N+V+L
Sbjct: 33 MGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLG 91
Query: 471 YYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPR 530
+ D+ L+ ++ NG+L + L +G P LSW R +IA+G A G+ +LHE
Sbjct: 92 FSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPP--LSWHMRCKIAQGAANGINFLHE---N 146
Query: 531 KFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKT 590
+H DIK +NILLD F ISDFGL+R +S F + + T
Sbjct: 147 HHIHRDIKSANILLDEAFTAKISDFGLAR----------ASEKFAQXVM----XXRIVGT 192
Query: 591 NNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVRWVKKGF 650
Y APEA P K D+YSFGVVLLE++TG P E L+ ++
Sbjct: 193 TAYMAPEALRGEITP--KSDIYSFGVVLLEIITG-----LPAVDEHREPQLLLDIKEEIE 245
Query: 651 EEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERI 705
+EE + D +D + E A++ +A C RP +K V + L+ +
Sbjct: 246 DEEKTIEDYIDKKMNDADSTSVE--AMYSVASQCLHEKKNKRPDIKKVQQLLQEM 298
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 119 bits (297), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 94/298 (31%), Positives = 145/298 (48%), Gaps = 39/298 (13%)
Query: 415 LGKSGLGIVYKVVLGNGIPVAVRRLGE----GGEQRHREFVTEVQAIAKVKHPNIVKLRA 470
+G+ G G+VYK + N VAV++L E+ ++F E++ +AK +H N+V+L
Sbjct: 39 MGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLG 97
Query: 471 YYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPR 530
+ D+ L+ ++ NG+L + L +G P LSW R +IA+G A G+ +LHE
Sbjct: 98 FSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPP--LSWHMRCKIAQGAANGINFLHE---N 152
Query: 531 KFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEK- 589
+H DIK +NILLD F ISDFGL+R + + + V +
Sbjct: 153 HHIHRDIKSANILLDEAFTAKISDFGLAR-----------------ASEKFAQTVMXSRI 195
Query: 590 --TNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVRWVK 647
T Y APEA P K D+YSFGVVLLE++TG P E L+ +
Sbjct: 196 VGTTAYMAPEALRGEITP--KSDIYSFGVVLLEIITG-----LPAVDEHREPQLLLDIKE 248
Query: 648 KGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERI 705
+ +EE + D +D + E A++ +A C RP +K V + L+ +
Sbjct: 249 EIEDEEKTIEDYIDKKMNDADSTSVE--AMYSVASQCLHEKKNKRPDIKKVQQLLQEM 304
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/216 (36%), Positives = 112/216 (51%), Gaps = 32/216 (14%)
Query: 416 GKSGLGIVYKVVLGNGIPVAVRRLGE----GGEQRHREFVTEVQAIAKVKHPNIVKLRAY 471
G+ G G+VYK + N VAV++L E+ ++F E++ AK +H N+V+L +
Sbjct: 31 GEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVELLGF 89
Query: 472 YWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRK 531
D+ L+ + NG+L + L +G P LSW R +IA+G A G+ +LHE
Sbjct: 90 SSDGDDLCLVYVYXPNGSLLDRLSCLDGTPP--LSWHXRCKIAQGAANGINFLHE---NH 144
Query: 532 FVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEK-- 589
+H DIK +NILLD F ISDFGL+R + + + V +
Sbjct: 145 HIHRDIKSANILLDEAFTAKISDFGLAR-----------------ASEKFAQXVXXSRIV 187
Query: 590 -TNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTG 624
T Y APEA P K D+YSFGVVLLE++TG
Sbjct: 188 GTTAYXAPEALRGEITP--KSDIYSFGVVLLEIITG 221
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 146/315 (46%), Gaps = 53/315 (16%)
Query: 400 FTFELDELLRASAYVLGKSGLGIVYKVVLGNG-----IPVAVRRLGEGGEQRHR-EFVTE 453
FT E+ V+G G VYK +L +PVA++ L G ++ R +F+ E
Sbjct: 37 FTTEIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGE 96
Query: 454 VQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRI 513
+ + H NI++L ++I++++ NG L LR ++G+ S L LR
Sbjct: 97 AGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSV-LQLVGMLR- 154
Query: 514 AKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGG 573
G A G+ YL + +VH D+ NIL++++ +SDFGLSR++ ++P ++
Sbjct: 155 --GIAAGMKYLANMN---YVHRDLAARNILVNSNLVCKVSDFGLSRVLE---DDPEATYT 206
Query: 574 FMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKSP--ELS 630
GG +P + APEA + + DV+SFG+V+ E++T G+ P ELS
Sbjct: 207 TSGGKIPI----------RWTAPEA-ISYRKFTSASDVWSFGIVMWEVMTYGERPYWELS 255
Query: 631 PTTSTSIEVPDLVRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPE 690
++++ + GF P+ A++ L + C + +
Sbjct: 256 NH--------EVMKAINDGFRLPTPMDCPS---------------AIYQLMMQCWQQERA 292
Query: 691 VRPRMKNVSENLERI 705
RP+ ++ L+++
Sbjct: 293 RRPKFADIVSILDKL 307
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 129/274 (47%), Gaps = 44/274 (16%)
Query: 432 IPVAVRRLGEG-GEQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNL 490
+PVA++ L G E++ R+F++E + + HPNI++L +++++++ NG+L
Sbjct: 78 VPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSL 137
Query: 491 ANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQP 550
LR +GQ + + + +G G+ YL + +VH D+ N+L+D++
Sbjct: 138 DTFLRTHDGQ----FTIMQLVGMLRGVGAGMRYLSDLG---YVHRDLAARNVLVDSNLVC 190
Query: 551 YISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWD 610
+SDFGLSR++ ++P ++ GG +P + APEA + D
Sbjct: 191 KVSDFGLSRVLE---DDPDAAXTTTGGKIPI----------RWTAPEA-IAFRTFSSASD 236
Query: 611 VYSFGVVLLELLT-GKSPELSPTTSTSIEVPDLVRWVKKGFEEENPLSDMVDAMLLQEVH 669
V+SFGVV+ E+L G+ P + T D++ V++G+ P+ H
Sbjct: 237 VWSFGVVMWEVLAYGERPYWNMTNR------DVISSVEEGYRLPAPMGC---------PH 281
Query: 670 AKKEVIAVFHLALACTEADPEVRPRMKNVSENLE 703
A+ L L C D RPR + L+
Sbjct: 282 ------ALHQLMLDCWHKDRAQRPRFSQIVSVLD 309
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 133/276 (48%), Gaps = 44/276 (15%)
Query: 432 IPVAVRRLGEG-GEQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNL 490
I VA++ L G E++ R+F+ E + + HPNI++L +++++++ NG+L
Sbjct: 74 ISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL 133
Query: 491 ANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQP 550
+ LR + Q T + LR G A G+ YL S FVH D+ NIL++++
Sbjct: 134 DSFLRKHDAQ-FTVIQLVGMLR---GIASGMKYL---SDMGFVHRDLAARNILINSNLVC 186
Query: 551 YISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWD 610
+SDFGLSR++ ++P ++ GG +P + +PEA + + D
Sbjct: 187 KVSDFGLSRVLE---DDPEAAYTTRGGKIPI----------RWTSPEA-IAYRKFTSASD 232
Query: 611 VYSFGVVLLELLT-GKSPELSPTTSTSIEVPDLVRWVKKGFEEENPLSDMVDAMLLQEVH 669
V+S+G+VL E+++ G+ P + D+++ V +G+ P+
Sbjct: 233 VWSYGIVLWEVMSYGERPYWEMSNQ------DVIKAVDEGYRLPPPMDCPA--------- 277
Query: 670 AKKEVIAVFHLALACTEADPEVRPRMKNVSENLERI 705
A++ L L C + D RP+ + + L+++
Sbjct: 278 ------ALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 129/274 (47%), Gaps = 44/274 (16%)
Query: 432 IPVAVRRLGEG-GEQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNL 490
+PVA++ L G E++ R+F++E + + HPNI++L +++++++ NG+L
Sbjct: 78 VPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSL 137
Query: 491 ANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQP 550
LR +GQ + + + +G G+ YL + +VH D+ N+L+D++
Sbjct: 138 DTFLRTHDGQ----FTIMQLVGMLRGVGAGMRYLSDLG---YVHRDLAARNVLVDSNLVC 190
Query: 551 YISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWD 610
+SDFGLSR++ ++P ++ GG +P + APEA + D
Sbjct: 191 KVSDFGLSRVLE---DDPDAAYTTTGGKIPI----------RWTAPEA-IAFRTFSSASD 236
Query: 611 VYSFGVVLLELLT-GKSPELSPTTSTSIEVPDLVRWVKKGFEEENPLSDMVDAMLLQEVH 669
V+SFGVV+ E+L G+ P + T D++ V++G+ P+ H
Sbjct: 237 VWSFGVVMWEVLAYGERPYWNMTNR------DVISSVEEGYRLPAPMGC---------PH 281
Query: 670 AKKEVIAVFHLALACTEADPEVRPRMKNVSENLE 703
A+ L L C D RPR + L+
Sbjct: 282 ------ALHQLMLDCWHKDRAQRPRFSQIVSVLD 309
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 134/276 (48%), Gaps = 44/276 (15%)
Query: 432 IPVAVRRLGEG-GEQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNL 490
+PVA++ L G E++ R+F+ E + + HPNI+ L +++++++ NG+L
Sbjct: 51 LPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSL 110
Query: 491 ANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQP 550
L+ +GQ T + LR G + G+ YL S +VH D+ NIL++++
Sbjct: 111 DTFLKKNDGQ-FTVIQLVGMLR---GISAGMKYL---SDMGYVHRDLAARNILINSNLVC 163
Query: 551 YISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWD 610
+SDFGLSR++ ++P ++ GG +P + APEA + + D
Sbjct: 164 KVSDFGLSRVLE---DDPEAAYTTRGGKIPI----------RWTAPEA-IAFRKFTSASD 209
Query: 611 VYSFGVVLLELLT-GKSPELSPTTSTSIEVPDLVRWVKKGFEEENPLSDMVDAMLLQEVH 669
V+S+G+V+ E+++ G+ P T D+++ V++G+ +P+
Sbjct: 210 VWSYGIVMWEVVSYGERPYWEMTNQ------DVIKAVEEGYRLPSPMDCPA--------- 254
Query: 670 AKKEVIAVFHLALACTEADPEVRPRMKNVSENLERI 705
A++ L L C + + RP+ + L+++
Sbjct: 255 ------ALYQLMLDCWQKERNSRPKFDEIVNMLDKL 284
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 133/276 (48%), Gaps = 44/276 (15%)
Query: 432 IPVAVRRLGEG-GEQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNL 490
I VA++ L G E++ R+F+ E + + HPNI++L +++++++ NG+L
Sbjct: 74 ISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL 133
Query: 491 ANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQP 550
+ LR + Q T + LR G A G+ YL S +VH D+ NIL++++
Sbjct: 134 DSFLRKHDAQ-FTVIQLVGMLR---GIASGMKYL---SDMGYVHRDLAARNILINSNLVC 186
Query: 551 YISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWD 610
+SDFGLSR++ ++P ++ GG +P + +PEA + + D
Sbjct: 187 KVSDFGLSRVLE---DDPEAAYTTRGGKIPI----------RWTSPEA-IAYRKFTSASD 232
Query: 611 VYSFGVVLLELLT-GKSPELSPTTSTSIEVPDLVRWVKKGFEEENPLSDMVDAMLLQEVH 669
V+S+G+VL E+++ G+ P + D+++ V +G+ P+
Sbjct: 233 VWSYGIVLWEVMSYGERPYWEMSNQ------DVIKAVDEGYRLPPPMDCPA--------- 277
Query: 670 AKKEVIAVFHLALACTEADPEVRPRMKNVSENLERI 705
A++ L L C + D RP+ + + L+++
Sbjct: 278 ------ALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 133/276 (48%), Gaps = 44/276 (15%)
Query: 432 IPVAVRRLGEG-GEQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNL 490
I VA++ L G E++ R+F+ E + + HPNI++L +++++++ NG+L
Sbjct: 45 ISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL 104
Query: 491 ANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQP 550
+ LR + Q T + LR G A G+ YL S +VH D+ NIL++++
Sbjct: 105 DSFLRKHDAQ-FTVIQLVGMLR---GIASGMKYL---SDMGYVHRDLAARNILINSNLVC 157
Query: 551 YISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWD 610
+SDFGLSR++ ++P ++ GG +P + +PEA + + D
Sbjct: 158 KVSDFGLSRVLE---DDPEAAYTTRGGKIPI----------RWTSPEA-IAYRKFTSASD 203
Query: 611 VYSFGVVLLELLT-GKSPELSPTTSTSIEVPDLVRWVKKGFEEENPLSDMVDAMLLQEVH 669
V+S+G+VL E+++ G+ P + D+++ V +G+ P+
Sbjct: 204 VWSYGIVLWEVMSYGERPYWEMSNQ------DVIKAVDEGYRLPPPMDCPA--------- 248
Query: 670 AKKEVIAVFHLALACTEADPEVRPRMKNVSENLERI 705
A++ L L C + D RP+ + + L+++
Sbjct: 249 ------ALYQLMLDCWQKDRNNRPKFEQIVSILDKL 278
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 133/276 (48%), Gaps = 44/276 (15%)
Query: 432 IPVAVRRLGEG-GEQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNL 490
I VA++ L G E++ R+F+ E + + HPNI++L +++++++ NG+L
Sbjct: 74 ISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL 133
Query: 491 ANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQP 550
+ LR + Q T + LR G A G+ YL S +VH D+ NIL++++
Sbjct: 134 DSFLRKHDAQ-FTVIQLVGMLR---GIASGMKYL---SDMGYVHRDLAARNILINSNLVC 186
Query: 551 YISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWD 610
+SDFGLSR++ ++P ++ GG +P + +PEA + + D
Sbjct: 187 KVSDFGLSRVLE---DDPEAAYTTRGGKIPI----------RWTSPEA-IAYRKFTSASD 232
Query: 611 VYSFGVVLLELLT-GKSPELSPTTSTSIEVPDLVRWVKKGFEEENPLSDMVDAMLLQEVH 669
V+S+G+VL E+++ G+ P + D+++ V +G+ P+
Sbjct: 233 VWSYGIVLWEVMSYGERPYWEMSNQ------DVIKAVDEGYRLPPPMDCPA--------- 277
Query: 670 AKKEVIAVFHLALACTEADPEVRPRMKNVSENLERI 705
A++ L L C + D RP+ + + L+++
Sbjct: 278 ------ALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 133/276 (48%), Gaps = 44/276 (15%)
Query: 432 IPVAVRRLGEG-GEQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNL 490
I VA++ L G E++ R+F+ E + + HPNI++L +++++++ NG+L
Sbjct: 74 ISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL 133
Query: 491 ANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQP 550
+ LR + Q T + LR G A G+ YL S +VH D+ NIL++++
Sbjct: 134 DSFLRKHDAQ-FTVIQLVGMLR---GIASGMKYL---SDMGYVHRDLAARNILINSNLVC 186
Query: 551 YISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWD 610
+SDFGLSR++ ++P ++ GG +P + +PEA + + D
Sbjct: 187 KVSDFGLSRVLE---DDPEAAYTTRGGKIPI----------RWTSPEA-IAYRKFTSASD 232
Query: 611 VYSFGVVLLELLT-GKSPELSPTTSTSIEVPDLVRWVKKGFEEENPLSDMVDAMLLQEVH 669
V+S+G+VL E+++ G+ P + D+++ V +G+ P+
Sbjct: 233 VWSYGIVLWEVMSYGERPYWEMSNQ------DVIKAVDEGYRLPPPMDCPA--------- 277
Query: 670 AKKEVIAVFHLALACTEADPEVRPRMKNVSENLERI 705
A++ L L C + D RP+ + + L+++
Sbjct: 278 ------ALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 133/276 (48%), Gaps = 44/276 (15%)
Query: 432 IPVAVRRLGEG-GEQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNL 490
I VA++ L G E++ R+F+ E + + HPNI++L +++++++ NG+L
Sbjct: 62 ISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL 121
Query: 491 ANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQP 550
+ LR + Q T + LR G A G+ YL + +VH D+ NIL++++
Sbjct: 122 DSFLRKHDAQ-FTVIQLVGMLR---GIASGMKYLSDMG---YVHRDLAARNILINSNLVC 174
Query: 551 YISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWD 610
+SDFGLSR++ ++P ++ GG +P + +PEA + + D
Sbjct: 175 KVSDFGLSRVLE---DDPEAAYTTRGGKIPI----------RWTSPEA-IAYRKFTSASD 220
Query: 611 VYSFGVVLLELLT-GKSPELSPTTSTSIEVPDLVRWVKKGFEEENPLSDMVDAMLLQEVH 669
V+S+G+VL E+++ G+ P + D+++ V +G+ P+
Sbjct: 221 VWSYGIVLWEVMSYGERPYWEMSNQ------DVIKAVDEGYRLPPPMDCPA--------- 265
Query: 670 AKKEVIAVFHLALACTEADPEVRPRMKNVSENLERI 705
A++ L L C + D RP+ + + L+++
Sbjct: 266 ------ALYQLMLDCWQKDRNNRPKFEQIVSILDKL 295
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 133/276 (48%), Gaps = 44/276 (15%)
Query: 432 IPVAVRRLGEG-GEQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNL 490
I VA++ L G E++ R+F+ E + + HPNI++L +++++++ NG+L
Sbjct: 74 ISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL 133
Query: 491 ANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQP 550
+ LR + Q T + LR G A G+ YL S +VH D+ NIL++++
Sbjct: 134 DSFLRKHDAQ-FTVIQLVGMLR---GIASGMKYL---SDMGYVHRDLAARNILINSNLVC 186
Query: 551 YISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWD 610
+SDFGLSR++ ++P ++ GG +P + +PEA + + D
Sbjct: 187 KVSDFGLSRVLE---DDPEAAYTTRGGKIPI----------RWTSPEA-IAYRKFTSASD 232
Query: 611 VYSFGVVLLELLT-GKSPELSPTTSTSIEVPDLVRWVKKGFEEENPLSDMVDAMLLQEVH 669
V+S+G+VL E+++ G+ P + D+++ V +G+ P+
Sbjct: 233 VWSYGIVLWEVMSYGERPYWEMSNQ------DVIKAVDEGYRLPPPMDCPA--------- 277
Query: 670 AKKEVIAVFHLALACTEADPEVRPRMKNVSENLERI 705
A++ L L C + D RP+ + + L+++
Sbjct: 278 ------ALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 133/276 (48%), Gaps = 44/276 (15%)
Query: 432 IPVAVRRLGEG-GEQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNL 490
I VA++ L G E++ R+F+ E + + HPNI++L +++++++ NG+L
Sbjct: 72 ISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL 131
Query: 491 ANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQP 550
+ LR + Q T + LR G A G+ YL S +VH D+ NIL++++
Sbjct: 132 DSFLRKHDAQ-FTVIQLVGMLR---GIASGMKYL---SDMGYVHRDLAARNILINSNLVC 184
Query: 551 YISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWD 610
+SDFGLSR++ ++P ++ GG +P + +PEA + + D
Sbjct: 185 KVSDFGLSRVLE---DDPEAAYTTRGGKIPI----------RWTSPEA-IAYRKFTSASD 230
Query: 611 VYSFGVVLLELLT-GKSPELSPTTSTSIEVPDLVRWVKKGFEEENPLSDMVDAMLLQEVH 669
V+S+G+VL E+++ G+ P + D+++ V +G+ P+
Sbjct: 231 VWSYGIVLWEVMSYGERPYWEMSNQ------DVIKAVDEGYRLPPPMDCPA--------- 275
Query: 670 AKKEVIAVFHLALACTEADPEVRPRMKNVSENLERI 705
A++ L L C + D RP+ + + L+++
Sbjct: 276 ------ALYQLMLDCWQKDRNNRPKFEQIVSILDKL 305
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 132/276 (47%), Gaps = 42/276 (15%)
Query: 432 IPVAVRRLGEG-GEQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNL 490
I VA++ L G E++ R+F++E + + HPN++ L ++I++F+ NG+L
Sbjct: 62 IFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSL 121
Query: 491 ANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQP 550
+ LR +GQ T + LR G A G+ YL + + +VH D+ NIL++++
Sbjct: 122 DSFLRQNDGQ-FTVIQLVGMLR---GIAAGMKYLADMN---YVHRDLAARNILVNSNLVC 174
Query: 551 YISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWD 610
+SDFGLSR + ++P+ + +GG +P + APEA + + D
Sbjct: 175 KVSDFGLSRFLEDDTSDPTYTSA-LGGKIPI----------RWTAPEA-IQYRKFTSASD 222
Query: 611 VYSFGVVLLELLT-GKSPELSPTTSTSIEVPDLVRWVKKGFEEENPLSDMVDAMLLQEVH 669
V+S+G+V+ E+++ G+ P T D++ +++ + P+
Sbjct: 223 VWSYGIVMWEVMSYGERPYWDMTNQ------DVINAIEQDYRLPPPMDCPS--------- 267
Query: 670 AKKEVIAVFHLALACTEADPEVRPRMKNVSENLERI 705
A+ L L C + D RP+ + L+++
Sbjct: 268 ------ALHQLMLDCWQKDRNHRPKFGQIVNTLDKM 297
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 133/276 (48%), Gaps = 44/276 (15%)
Query: 432 IPVAVRRLGEG-GEQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNL 490
I VA++ L G E++ R+F+ E + + HPNI++L +++++++ NG+L
Sbjct: 74 ISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL 133
Query: 491 ANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQP 550
+ LR + Q T + LR G A G+ YL S +VH D+ NIL++++
Sbjct: 134 DSFLRKHDAQ-FTVIQLVGMLR---GIASGMKYL---SDMGYVHRDLAARNILINSNLVC 186
Query: 551 YISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWD 610
+SDFGL+R++ ++P ++ GG +P + +PEA + + D
Sbjct: 187 KVSDFGLARVLE---DDPEAAYTTRGGKIPI----------RWTSPEA-IAYRKFTSASD 232
Query: 611 VYSFGVVLLELLT-GKSPELSPTTSTSIEVPDLVRWVKKGFEEENPLSDMVDAMLLQEVH 669
V+S+G+VL E+++ G+ P + D+++ V +G+ P+
Sbjct: 233 VWSYGIVLWEVMSYGERPYWEMSNQ------DVIKAVDEGYRLPPPMDCPA--------- 277
Query: 670 AKKEVIAVFHLALACTEADPEVRPRMKNVSENLERI 705
A++ L L C + D RP+ + + L+++
Sbjct: 278 ------ALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 132/276 (47%), Gaps = 44/276 (15%)
Query: 432 IPVAVRRLGEG-GEQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNL 490
I VA++ L G E++ R+F+ E + + HPNI++L +++++++ NG+L
Sbjct: 74 ISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL 133
Query: 491 ANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQP 550
+ LR + Q T + LR G A G+ YL S +VH D+ NIL++++
Sbjct: 134 DSFLRKHDAQ-FTVIQLVGMLR---GIASGMKYL---SDMGYVHRDLAARNILINSNLVC 186
Query: 551 YISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWD 610
+SDFGL R++ ++P ++ GG +P + +PEA + + D
Sbjct: 187 KVSDFGLGRVLE---DDPEAAYTTRGGKIPI----------RWTSPEA-IAYRKFTSASD 232
Query: 611 VYSFGVVLLELLT-GKSPELSPTTSTSIEVPDLVRWVKKGFEEENPLSDMVDAMLLQEVH 669
V+S+G+VL E+++ G+ P + D+++ V +G+ P+
Sbjct: 233 VWSYGIVLWEVMSYGERPYWEMSNQ------DVIKAVDEGYRLPPPMDCPA--------- 277
Query: 670 AKKEVIAVFHLALACTEADPEVRPRMKNVSENLERI 705
A++ L L C + D RP+ + + L+++
Sbjct: 278 ------ALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 132/276 (47%), Gaps = 44/276 (15%)
Query: 432 IPVAVRRLGEG-GEQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNL 490
I VA++ L G E++ R+F+ E + + HPNI++L +++++ + NG+L
Sbjct: 45 ISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSL 104
Query: 491 ANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQP 550
+ LR + Q T + LR G A G+ YL S +VH D+ NIL++++
Sbjct: 105 DSFLRKHDAQ-FTVIQLVGMLR---GIASGMKYL---SDMGYVHRDLAARNILINSNLVC 157
Query: 551 YISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWD 610
+SDFGLSR++ ++P ++ GG +P + +PEA + + D
Sbjct: 158 KVSDFGLSRVLE---DDPEAAYTTRGGKIPI----------RWTSPEA-IAYRKFTSASD 203
Query: 611 VYSFGVVLLELLT-GKSPELSPTTSTSIEVPDLVRWVKKGFEEENPLSDMVDAMLLQEVH 669
V+S+G+VL E+++ G+ P + D+++ V +G+ P+
Sbjct: 204 VWSYGIVLWEVMSYGERPYWEMSNQ------DVIKAVDEGYRLPPPMDCPA--------- 248
Query: 670 AKKEVIAVFHLALACTEADPEVRPRMKNVSENLERI 705
A++ L L C + D RP+ + + L+++
Sbjct: 249 ------ALYQLMLDCWQKDRNNRPKFEQIVSILDKL 278
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 100/223 (44%), Gaps = 13/223 (5%)
Query: 414 VLGKSGLGIVYKVV-LGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYY 472
VLGK G KV G + ++ L E+ R F+ EV+ + ++HPN++K
Sbjct: 17 VLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVL 76
Query: 473 WAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKF 532
+ I+++I G L ++ + Q WS R+ AK A G+AYLH +
Sbjct: 77 YKDKRLNFITEYIKGGTLRGIIKSMDSQ----YPWSQRVSFAKDIASGMAYLHSMN---I 129
Query: 533 VHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNN 592
+H D+ N L+ + ++DFGL+RL+ P G P K T N
Sbjct: 130 IHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPE---GLRSLKKPDRKKRYTVVGNP 186
Query: 593 YRAPEARVPGNRPMQKWDVYSFGVVLLELL--TGKSPELSPTT 633
Y + G +K DV+SFG+VL E++ P+ P T
Sbjct: 187 YWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRT 229
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 132/276 (47%), Gaps = 44/276 (15%)
Query: 432 IPVAVRRLGEG-GEQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNL 490
I VA++ L G E++ R+F+ E + + HPNI++L +++++ + NG+L
Sbjct: 74 ISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSL 133
Query: 491 ANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQP 550
+ LR + Q T + LR G A G+ YL S +VH D+ NIL++++
Sbjct: 134 DSFLRKHDAQ-FTVIQLVGMLR---GIASGMKYL---SDMGYVHRDLAARNILINSNLVC 186
Query: 551 YISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWD 610
+SDFGLSR++ ++P ++ GG +P + +PEA + + D
Sbjct: 187 KVSDFGLSRVLE---DDPEAAYTTRGGKIPI----------RWTSPEA-IAYRKFTSASD 232
Query: 611 VYSFGVVLLELLT-GKSPELSPTTSTSIEVPDLVRWVKKGFEEENPLSDMVDAMLLQEVH 669
V+S+G+VL E+++ G+ P + D+++ V +G+ P+
Sbjct: 233 VWSYGIVLWEVMSYGERPYWEMSNQ------DVIKAVDEGYRLPPPMDCPA--------- 277
Query: 670 AKKEVIAVFHLALACTEADPEVRPRMKNVSENLERI 705
A++ L L C + D RP+ + + L+++
Sbjct: 278 ------ALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 104/217 (47%), Gaps = 27/217 (12%)
Query: 415 LGKSGLGIVYKVVLGNGIPVAVRRLGEGG--EQRHREFVTEVQAIAKVKHPNIVKLRAYY 472
+G G V++ +G VAV+ L E +R EF+ EV + +++HPNIV
Sbjct: 45 IGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 473 WAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKF 532
P ++++++S G+L L + L RL +A A+G+ YLH +P
Sbjct: 104 TQPPNLSIVTEYLSRGSLYRLLHKSGAR--EQLDERRRLSMAYDVAKGMNYLHNRNP-PI 160
Query: 533 VHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNN 592
VH ++K N+L+D + + DFGLSRL T + S+ G T
Sbjct: 161 VHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAG----------------TPE 204
Query: 593 YRAPEA--RVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
+ APE P N +K DVYSFGV+L EL T + P
Sbjct: 205 WMAPEVLRDEPSN---EKSDVYSFGVILWELATLQQP 238
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 127/280 (45%), Gaps = 54/280 (19%)
Query: 434 VAVRRLGEG-GEQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLAN 492
VA++ L G E++ REF++E + + +HPNI++L +++++F+ NG L +
Sbjct: 47 VAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDS 106
Query: 493 ALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYI 552
LR +GQ T + LR G A G+ YL E S +VH D+ NIL++++ +
Sbjct: 107 FLRLNDGQ-FTVIQLVGMLR---GIASGMRYLAEMS---YVHRDLAARNILVNSNLVCKV 159
Query: 553 SDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVY 612
SDFGLSR + ++P+ + +GG +P + APEA + + D +
Sbjct: 160 SDFGLSRFLEENSSDPTETSS-LGGKIPI----------RWTAPEA-IAFRKFTSASDAW 207
Query: 613 SFGVVLLELLTGKSPELSPTTSTSIEVPDLVRWVKKGFEEENPLSDMVDAMLLQEVHAKK 672
S+G+V+ E+++ E P DM + ++ +
Sbjct: 208 SYGIVMWEVMSFG---------------------------ERPYWDMSNQDVINAIEQDY 240
Query: 673 EV-------IAVFHLALACTEADPEVRPRMKNVSENLERI 705
+ ++ L L C + D RPR V L+++
Sbjct: 241 RLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVSALDKM 280
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 127/280 (45%), Gaps = 54/280 (19%)
Query: 434 VAVRRLGEG-GEQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLAN 492
VA++ L G E++ REF++E + + +HPNI++L +++++F+ NG L +
Sbjct: 45 VAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDS 104
Query: 493 ALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYI 552
LR +GQ T + LR G A G+ YL E S +VH D+ NIL++++ +
Sbjct: 105 FLRLNDGQ-FTVIQLVGMLR---GIASGMRYLAEMS---YVHRDLAARNILVNSNLVCKV 157
Query: 553 SDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVY 612
SDFGLSR + ++P+ + +GG +P + APEA + + D +
Sbjct: 158 SDFGLSRFLEENSSDPTYTSS-LGGKIPI----------RWTAPEA-IAFRKFTSASDAW 205
Query: 613 SFGVVLLELLTGKSPELSPTTSTSIEVPDLVRWVKKGFEEENPLSDMVDAMLLQEVHAKK 672
S+G+V+ E+++ E P DM + ++ +
Sbjct: 206 SYGIVMWEVMSFG---------------------------ERPYWDMSNQDVINAIEQDY 238
Query: 673 EV-------IAVFHLALACTEADPEVRPRMKNVSENLERI 705
+ ++ L L C + D RPR V L+++
Sbjct: 239 RLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVSALDKM 278
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 102/217 (47%), Gaps = 27/217 (12%)
Query: 415 LGKSGLGIVYKVVLGNGIPVAVRRLGEGG--EQRHREFVTEVQAIAKVKHPNIVKLRAYY 472
+G G V++ +G VAV+ L E +R EF+ EV + +++HPNIV
Sbjct: 45 IGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 473 WAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKF 532
P ++++++S G+L L + L RL +A A+G+ YLH +P
Sbjct: 104 TQPPNLSIVTEYLSRGSLYRLLHKSGAR--EQLDERRRLSMAYDVAKGMNYLHNRNP-PI 160
Query: 533 VHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNN 592
VH D+K N+L+D + + DFGLSRL A ++ T
Sbjct: 161 VHRDLKSPNLLVDKKYTVKVCDFGLSRL----------------KASXFLXSKXAAGTPE 204
Query: 593 YRAPEA--RVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
+ APE P N +K DVYSFGV+L EL T + P
Sbjct: 205 WMAPEVLRDEPSN---EKSDVYSFGVILWELATLQQP 238
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/161 (38%), Positives = 87/161 (54%), Gaps = 7/161 (4%)
Query: 107 GSLPDQLFNATSLHSIFLYGNNLSGSLPPSVCNLPRLQNLDLSNNSFSGSLPDGLKNCKQ 166
G +P L N + L S+ L N LSG++P S+ +L +L++L L N G +P L K
Sbjct: 405 GKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKT 464
Query: 167 LQRLILARNKFSGQIPAGIWPELENLVQLDLSDNDFKGPIPNDLGELQSLSATLNLSYNH 226
L+ LIL N +G+IP+G+ NL + LS+N G IP +G L++L A L LS N
Sbjct: 465 LETLILDFNDLTGEIPSGL-SNCTNLNWISLSNNRLTGEIPKWIGRLENL-AILKLSNNS 522
Query: 227 LSGKIPKSLGNLPVTVSFDLRGNNLSGEIP-----QTGSFA 262
SG IP LG+ + DL N +G IP Q+G A
Sbjct: 523 FSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIA 563
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/154 (40%), Positives = 86/154 (55%), Gaps = 5/154 (3%)
Query: 107 GSLPDQLFN-ATSLHSIFLYGNNLSGSLPPSVCNLPR--LQNLDLSNNSFSGSLPDGLKN 163
G LP+ L N + SL ++ L NN SG + P++C P+ LQ L L NN F+G +P L N
Sbjct: 354 GELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSN 413
Query: 164 CKQLQRLILARNKFSGQIPAGIWPELENLVQLDLSDNDFKGPIPNDLGELQSLSATLNLS 223
C +L L L+ N SG IP+ + L L L L N +G IP +L +++L TL L
Sbjct: 414 CSELVSLHLSFNYLSGTIPSSLG-SLSKLRDLKLWLNMLEGEIPQELMYVKTLE-TLILD 471
Query: 224 YNHLSGKIPKSLGNLPVTVSFDLRGNNLSGEIPQ 257
+N L+G+IP L N L N L+GEIP+
Sbjct: 472 FNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPK 505
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 76/136 (55%), Gaps = 2/136 (1%)
Query: 147 DLSNNSFSGSLPDGLKNCKQLQRLILARNKFSGQIPAGIWPELENLVQLDLSDNDFKGPI 206
++++ + G N + L ++ N SG IP I + L L+L ND G I
Sbjct: 611 NITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIG-SMPYLFILNLGHNDISGSI 669
Query: 207 PNDLGELQSLSATLNLSYNHLSGKIPKSLGNLPVTVSFDLRGNNLSGEIPQTGSFANQGP 266
P+++G+L+ L+ L+LS N L G+IP+++ L + DL NNLSG IP+ G F P
Sbjct: 670 PDEVGDLRGLN-ILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPP 728
Query: 267 TAFLSNPLLCGFPLQK 282
FL+NP LCG+PL +
Sbjct: 729 AKFLNNPGLCGYPLPR 744
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/134 (44%), Positives = 74/134 (55%), Gaps = 4/134 (2%)
Query: 127 NNLSGSLP-PSVCNLPRLQNLDLSNNSFSGSLPDGLKNCK-QLQRLILARNKFSGQIPAG 184
NN SG LP ++ + L+ LDLS N FSG LP+ L N L L L+ N FSG I
Sbjct: 325 NNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPN 384
Query: 185 IWPELENLVQ-LDLSDNDFKGPIPNDLGELQSLSATLNLSYNHLSGKIPKSLGNLPVTVS 243
+ +N +Q L L +N F G IP L L +L+LS+N+LSG IP SLG+L
Sbjct: 385 LCQNPKNTLQELYLQNNGFTGKIPPTLSNCSEL-VSLHLSFNYLSGTIPSSLGSLSKLRD 443
Query: 244 FDLRGNNLSGEIPQ 257
L N L GEIPQ
Sbjct: 444 LKLWLNMLEGEIPQ 457
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 82/166 (49%), Gaps = 26/166 (15%)
Query: 70 RVVGVAISGKNVRGYIPSELGSLIYXXXXXXXXXXXFGSLPDQLFNATSLHSIFLYGNNL 129
+V + +S + G IPS LGSL + L + L+ N L
Sbjct: 416 ELVSLHLSFNYLSGTIPSSLGSL------------------------SKLRDLKLWLNML 451
Query: 130 SGSLPPSVCNLPRLQNLDLSNNSFSGSLPDGLKNCKQLQRLILARNKFSGQIPAGIWPEL 189
G +P + + L+ L L N +G +P GL NC L + L+ N+ +G+IP I L
Sbjct: 452 EGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIG-RL 510
Query: 190 ENLVQLDLSDNDFKGPIPNDLGELQSLSATLNLSYNHLSGKIPKSL 235
ENL L LS+N F G IP +LG+ +SL L+L+ N +G IP ++
Sbjct: 511 ENLAILKLSNNSFSGNIPAELGDCRSL-IWLDLNTNLFNGTIPAAM 555
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/155 (40%), Positives = 88/155 (56%), Gaps = 3/155 (1%)
Query: 107 GSLPDQLFNAT-SLHSIFLYGNNLSGSLPPSVCNLPRLQNLDLSNNSFSGSLP-DGLKNC 164
G +PD L A +L + L GN+ G++PP + L++L LS+N+FSG LP D L
Sbjct: 280 GEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKM 339
Query: 165 KQLQRLILARNKFSGQIPAGIWPELENLVQLDLSDNDFKGPI-PNDLGELQSLSATLNLS 223
+ L+ L L+ N+FSG++P + +L+ LDLS N+F GPI PN ++ L L
Sbjct: 340 RGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQ 399
Query: 224 YNHLSGKIPKSLGNLPVTVSFDLRGNNLSGEIPQT 258
N +GKIP +L N VS L N LSG IP +
Sbjct: 400 NNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSS 434
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 67/131 (51%), Gaps = 4/131 (3%)
Query: 127 NNLSGSLPPSVCNLPRLQNLDLSNNSFSGSLPDGLKNCKQLQRLILARNKFSGQIPAGIW 186
NN S +P + + LQ+LD+S N SG + C +L+ L ++ N+F G IP
Sbjct: 207 NNFSTGIP-FLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPP--- 262
Query: 187 PELENLVQLDLSDNDFKGPIPNDLGELQSLSATLNLSYNHLSGKIPKSLGNLPVTVSFDL 246
L++L L L++N F G IP+ L L+LS NH G +P G+ + S L
Sbjct: 263 LPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLAL 322
Query: 247 RGNNLSGEIPQ 257
NN SGE+P
Sbjct: 323 SSNNFSGELPM 333
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 56/108 (51%)
Query: 81 VRGYIPSELGSLIYXXXXXXXXXXXFGSLPDQLFNATSLHSIFLYGNNLSGSLPPSVCNL 140
+ G IP EL + G +P L N T+L+ I L N L+G +P + L
Sbjct: 451 LEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRL 510
Query: 141 PRLQNLDLSNNSFSGSLPDGLKNCKQLQRLILARNKFSGQIPAGIWPE 188
L L LSNNSFSG++P L +C+ L L L N F+G IPA ++ +
Sbjct: 511 ENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQ 558
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 44/79 (55%)
Query: 81 VRGYIPSELGSLIYXXXXXXXXXXXFGSLPDQLFNATSLHSIFLYGNNLSGSLPPSVCNL 140
+ GYIP E+GS+ Y GS+PD++ + L+ + L N L G +P ++ L
Sbjct: 641 LSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSAL 700
Query: 141 PRLQNLDLSNNSFSGSLPD 159
L +DLSNN+ SG +P+
Sbjct: 701 TMLTEIDLSNNNLSGPIPE 719
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 115/260 (44%), Gaps = 62/260 (23%)
Query: 27 LLSLKSAIDQTDTSVFADWNENDPTPCRWSGISCMNITGFPDPRVVGVAISGKNVRGYIP 86
L+S K + D ++ DW+ N PC + G++C D +V + +S K P
Sbjct: 14 LISFKDVL--PDKNLLPDWSSNK-NPCTFDGVTCR------DDKVTSIDLSSK------P 58
Query: 87 SELGSLIYXXXXXXXXXXXFGSLPDQLFNATSLHSIFLYGNNLSGSLPPSVCNLPRLQNL 146
+G F ++ L + T L S+FL ++++GS+ C+ L +L
Sbjct: 59 LNVG---------------FSAVSSSLLSLTGLESLFLSNSHINGSVSGFKCS-ASLTSL 102
Query: 147 DLSNNSFSGSLP--DGLKNCKQLQRLILARNK--FSGQIPAGIWPELENLVQLDLSDNDF 202
DLS NS SG + L +C L+ L ++ N F G++ G+ +L +L LDLS N
Sbjct: 103 DLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGL--KLNSLEVLDLSANSI 160
Query: 203 KGP------IPNDLGELQSLSAT------------------LNLSYNHLSGKIPKSLGNL 238
G + + GEL+ L+ + L++S N+ S IP LG+
Sbjct: 161 SGANVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIP-FLGDC 219
Query: 239 PVTVSFDLRGNNLSGEIPQT 258
D+ GN LSG+ +
Sbjct: 220 SALQHLDISGNKLSGDFSRA 239
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/161 (38%), Positives = 87/161 (54%), Gaps = 7/161 (4%)
Query: 107 GSLPDQLFNATSLHSIFLYGNNLSGSLPPSVCNLPRLQNLDLSNNSFSGSLPDGLKNCKQ 166
G +P L N + L S+ L N LSG++P S+ +L +L++L L N G +P L K
Sbjct: 408 GKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKT 467
Query: 167 LQRLILARNKFSGQIPAGIWPELENLVQLDLSDNDFKGPIPNDLGELQSLSATLNLSYNH 226
L+ LIL N +G+IP+G+ NL + LS+N G IP +G L++L A L LS N
Sbjct: 468 LETLILDFNDLTGEIPSGL-SNCTNLNWISLSNNRLTGEIPKWIGRLENL-AILKLSNNS 525
Query: 227 LSGKIPKSLGNLPVTVSFDLRGNNLSGEIP-----QTGSFA 262
SG IP LG+ + DL N +G IP Q+G A
Sbjct: 526 FSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIA 566
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/154 (40%), Positives = 86/154 (55%), Gaps = 5/154 (3%)
Query: 107 GSLPDQLFN-ATSLHSIFLYGNNLSGSLPPSVCNLPR--LQNLDLSNNSFSGSLPDGLKN 163
G LP+ L N + SL ++ L NN SG + P++C P+ LQ L L NN F+G +P L N
Sbjct: 357 GELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSN 416
Query: 164 CKQLQRLILARNKFSGQIPAGIWPELENLVQLDLSDNDFKGPIPNDLGELQSLSATLNLS 223
C +L L L+ N SG IP+ + L L L L N +G IP +L +++L TL L
Sbjct: 417 CSELVSLHLSFNYLSGTIPSSLG-SLSKLRDLKLWLNMLEGEIPQELMYVKTLE-TLILD 474
Query: 224 YNHLSGKIPKSLGNLPVTVSFDLRGNNLSGEIPQ 257
+N L+G+IP L N L N L+GEIP+
Sbjct: 475 FNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPK 508
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 76/136 (55%), Gaps = 2/136 (1%)
Query: 147 DLSNNSFSGSLPDGLKNCKQLQRLILARNKFSGQIPAGIWPELENLVQLDLSDNDFKGPI 206
++++ + G N + L ++ N SG IP I + L L+L ND G I
Sbjct: 614 NITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIG-SMPYLFILNLGHNDISGSI 672
Query: 207 PNDLGELQSLSATLNLSYNHLSGKIPKSLGNLPVTVSFDLRGNNLSGEIPQTGSFANQGP 266
P+++G+L+ L+ L+LS N L G+IP+++ L + DL NNLSG IP+ G F P
Sbjct: 673 PDEVGDLRGLN-ILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPP 731
Query: 267 TAFLSNPLLCGFPLQK 282
FL+NP LCG+PL +
Sbjct: 732 AKFLNNPGLCGYPLPR 747
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/134 (44%), Positives = 74/134 (55%), Gaps = 4/134 (2%)
Query: 127 NNLSGSLP-PSVCNLPRLQNLDLSNNSFSGSLPDGLKNCK-QLQRLILARNKFSGQIPAG 184
NN SG LP ++ + L+ LDLS N FSG LP+ L N L L L+ N FSG I
Sbjct: 328 NNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPN 387
Query: 185 IWPELENLVQ-LDLSDNDFKGPIPNDLGELQSLSATLNLSYNHLSGKIPKSLGNLPVTVS 243
+ +N +Q L L +N F G IP L L +L+LS+N+LSG IP SLG+L
Sbjct: 388 LCQNPKNTLQELYLQNNGFTGKIPPTLSNCSEL-VSLHLSFNYLSGTIPSSLGSLSKLRD 446
Query: 244 FDLRGNNLSGEIPQ 257
L N L GEIPQ
Sbjct: 447 LKLWLNMLEGEIPQ 460
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 82/166 (49%), Gaps = 26/166 (15%)
Query: 70 RVVGVAISGKNVRGYIPSELGSLIYXXXXXXXXXXXFGSLPDQLFNATSLHSIFLYGNNL 129
+V + +S + G IPS LGSL + L + L+ N L
Sbjct: 419 ELVSLHLSFNYLSGTIPSSLGSL------------------------SKLRDLKLWLNML 454
Query: 130 SGSLPPSVCNLPRLQNLDLSNNSFSGSLPDGLKNCKQLQRLILARNKFSGQIPAGIWPEL 189
G +P + + L+ L L N +G +P GL NC L + L+ N+ +G+IP I L
Sbjct: 455 EGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIG-RL 513
Query: 190 ENLVQLDLSDNDFKGPIPNDLGELQSLSATLNLSYNHLSGKIPKSL 235
ENL L LS+N F G IP +LG+ +SL L+L+ N +G IP ++
Sbjct: 514 ENLAILKLSNNSFSGNIPAELGDCRSL-IWLDLNTNLFNGTIPAAM 558
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/155 (40%), Positives = 88/155 (56%), Gaps = 3/155 (1%)
Query: 107 GSLPDQLFNAT-SLHSIFLYGNNLSGSLPPSVCNLPRLQNLDLSNNSFSGSLP-DGLKNC 164
G +PD L A +L + L GN+ G++PP + L++L LS+N+FSG LP D L
Sbjct: 283 GEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKM 342
Query: 165 KQLQRLILARNKFSGQIPAGIWPELENLVQLDLSDNDFKGPI-PNDLGELQSLSATLNLS 223
+ L+ L L+ N+FSG++P + +L+ LDLS N+F GPI PN ++ L L
Sbjct: 343 RGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQ 402
Query: 224 YNHLSGKIPKSLGNLPVTVSFDLRGNNLSGEIPQT 258
N +GKIP +L N VS L N LSG IP +
Sbjct: 403 NNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSS 437
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 67/131 (51%), Gaps = 4/131 (3%)
Query: 127 NNLSGSLPPSVCNLPRLQNLDLSNNSFSGSLPDGLKNCKQLQRLILARNKFSGQIPAGIW 186
NN S +P + + LQ+LD+S N SG + C +L+ L ++ N+F G IP
Sbjct: 210 NNFSTGIP-FLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPP--- 265
Query: 187 PELENLVQLDLSDNDFKGPIPNDLGELQSLSATLNLSYNHLSGKIPKSLGNLPVTVSFDL 246
L++L L L++N F G IP+ L L+LS NH G +P G+ + S L
Sbjct: 266 LPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLAL 325
Query: 247 RGNNLSGEIPQ 257
NN SGE+P
Sbjct: 326 SSNNFSGELPM 336
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 56/108 (51%)
Query: 81 VRGYIPSELGSLIYXXXXXXXXXXXFGSLPDQLFNATSLHSIFLYGNNLSGSLPPSVCNL 140
+ G IP EL + G +P L N T+L+ I L N L+G +P + L
Sbjct: 454 LEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRL 513
Query: 141 PRLQNLDLSNNSFSGSLPDGLKNCKQLQRLILARNKFSGQIPAGIWPE 188
L L LSNNSFSG++P L +C+ L L L N F+G IPA ++ +
Sbjct: 514 ENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQ 561
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 44/79 (55%)
Query: 81 VRGYIPSELGSLIYXXXXXXXXXXXFGSLPDQLFNATSLHSIFLYGNNLSGSLPPSVCNL 140
+ GYIP E+GS+ Y GS+PD++ + L+ + L N L G +P ++ L
Sbjct: 644 LSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSAL 703
Query: 141 PRLQNLDLSNNSFSGSLPD 159
L +DLSNN+ SG +P+
Sbjct: 704 TMLTEIDLSNNNLSGPIPE 722
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 115/259 (44%), Gaps = 62/259 (23%)
Query: 27 LLSLKSAIDQTDTSVFADWNENDPTPCRWSGISCMNITGFPDPRVVGVAISGKNVRGYIP 86
L+S K + D ++ DW+ N PC + G++C D +V + +S K P
Sbjct: 17 LISFKDVL--PDKNLLPDWSSNK-NPCTFDGVTCR------DDKVTSIDLSSK------P 61
Query: 87 SELGSLIYXXXXXXXXXXXFGSLPDQLFNATSLHSIFLYGNNLSGSLPPSVCNLPRLQNL 146
+G F ++ L + T L S+FL ++++GS+ C+ L +L
Sbjct: 62 LNVG---------------FSAVSSSLLSLTGLESLFLSNSHINGSVSGFKCS-ASLTSL 105
Query: 147 DLSNNSFSGSLP--DGLKNCKQLQRLILARNK--FSGQIPAGIWPELENLVQLDLSDNDF 202
DLS NS SG + L +C L+ L ++ N F G++ G+ +L +L LDLS N
Sbjct: 106 DLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGL--KLNSLEVLDLSANSI 163
Query: 203 KGP------IPNDLGELQSLSAT------------------LNLSYNHLSGKIPKSLGNL 238
G + + GEL+ L+ + L++S N+ S IP LG+
Sbjct: 164 SGANVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIP-FLGDC 222
Query: 239 PVTVSFDLRGNNLSGEIPQ 257
D+ GN LSG+ +
Sbjct: 223 SALQHLDISGNKLSGDFSR 241
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 132/276 (47%), Gaps = 42/276 (15%)
Query: 432 IPVAVRRLGEG-GEQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNL 490
I VA++ L G E++ R+F++E + + HPN++ L ++I++F+ NG+L
Sbjct: 36 IFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSL 95
Query: 491 ANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQP 550
+ LR +GQ T + LR G A G+ YL + + +VH + NIL++++
Sbjct: 96 DSFLRQNDGQ-FTVIQLVGMLR---GIAAGMKYLADMN---YVHRALAARNILVNSNLVC 148
Query: 551 YISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWD 610
+SDFGLSR + ++P+ + +GG +P + APEA + + D
Sbjct: 149 KVSDFGLSRFLEDDTSDPTYTSA-LGGKIPI----------RWTAPEA-IQYRKFTSASD 196
Query: 611 VYSFGVVLLELLT-GKSPELSPTTSTSIEVPDLVRWVKKGFEEENPLSDMVDAMLLQEVH 669
V+S+G+V+ E+++ G+ P T D++ +++ + P+ D A+
Sbjct: 197 VWSYGIVMWEVMSYGERPYWDMTNQ------DVINAIEQDYRLPPPM-DCPSAL------ 243
Query: 670 AKKEVIAVFHLALACTEADPEVRPRMKNVSENLERI 705
L L C + D RP+ + L+++
Sbjct: 244 --------HQLMLDCWQKDRNHRPKFGQIVNTLDKM 271
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 131/276 (47%), Gaps = 44/276 (15%)
Query: 432 IPVAVRRLGEG-GEQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNL 490
I VA++ L G E++ R+F+ E + + HPNI++L +++++ + NG+L
Sbjct: 74 ISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSL 133
Query: 491 ANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQP 550
+ LR + Q T + LR G A G+ YL + VH D+ NIL++++
Sbjct: 134 DSFLRKHDAQ-FTVIQLVGMLR---GIASGMKYLSDMGA---VHRDLAARNILINSNLVC 186
Query: 551 YISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWD 610
+SDFGLSR++ ++P ++ GG +P + +PEA + + D
Sbjct: 187 KVSDFGLSRVLE---DDPEAAYTTRGGKIPI----------RWTSPEA-IAYRKFTSASD 232
Query: 611 VYSFGVVLLELLT-GKSPELSPTTSTSIEVPDLVRWVKKGFEEENPLSDMVDAMLLQEVH 669
V+S+G+VL E+++ G+ P + D+++ V +G+ P+
Sbjct: 233 VWSYGIVLWEVMSYGERPYWEMSNQ------DVIKAVDEGYRLPPPMDCPA--------- 277
Query: 670 AKKEVIAVFHLALACTEADPEVRPRMKNVSENLERI 705
A++ L L C + D RP+ + + L+++
Sbjct: 278 ------ALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 133/276 (48%), Gaps = 44/276 (15%)
Query: 432 IPVAVRRLGEG-GEQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNL 490
I VA++ L G +++ R+F++E + + HPNI+ L ++I++++ NG+L
Sbjct: 37 ICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSL 96
Query: 491 ANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQP 550
LR +G+ T + LR G G+ YL + S +VH D+ NIL++++
Sbjct: 97 DAFLRKNDGR-FTVIQLVGMLR---GIGSGMKYLSDMS---YVHRDLAARNILVNSNLVC 149
Query: 551 YISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWD 610
+SDFG+SR++ ++P ++ GG +P + APEA + + D
Sbjct: 150 KVSDFGMSRVLE---DDPEAAYTTRGGKIPI----------RWTAPEA-IAYRKFTSASD 195
Query: 611 VYSFGVVLLELLT-GKSPELSPTTSTSIEVPDLVRWVKKGFEEENPLSDMVDAMLLQEVH 669
V+S+G+V+ E+++ G+ P + D+++ +++G+ P+
Sbjct: 196 VWSYGIVMWEVMSYGERPYWDMSNQ------DVIKAIEEGYRLPPPMDC----------- 238
Query: 670 AKKEVIAVFHLALACTEADPEVRPRMKNVSENLERI 705
IA+ L L C + + RP+ + L+++
Sbjct: 239 ----PIALHQLMLDCWQKERSDRPKFGQIVNMLDKL 270
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 145/314 (46%), Gaps = 48/314 (15%)
Query: 398 KGFTFELDELLRASAYVLGKSGLGIV----YKVVLGNGIPVAVRRLGEG-GEQRHREFVT 452
+ F E+D V+G G V KV I VA++ L G +++ R+F++
Sbjct: 5 REFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLS 64
Query: 453 EVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLR 512
E + + HPNI+ L ++I++++ NG+L LR +G+ T + LR
Sbjct: 65 EASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGR-FTVIQLVGMLR 123
Query: 513 IAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSG 572
G G+ YL + S +VH D+ NIL++++ +SDFG+SR++ ++P ++
Sbjct: 124 ---GIGSGMKYLSDMS---YVHRDLAARNILVNSNLVCKVSDFGMSRVLE---DDPEAAY 174
Query: 573 GFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSP 631
GG +P + APEA + + DV+S+G+V+ E+++ G+ P
Sbjct: 175 TTRGGKIPI----------RWTAPEA-IAYRKFTSASDVWSYGIVMWEVMSYGERPYWDM 223
Query: 632 TTSTSIEVPDLVRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEV 691
+ D+++ +++G+ P+ IA+ L L C + +
Sbjct: 224 SNQ------DVIKAIEEGYRLPPPMDC---------------PIALHQLMLDCWQKERSD 262
Query: 692 RPRMKNVSENLERI 705
RP+ + L+++
Sbjct: 263 RPKFGQIVNMLDKL 276
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 144/314 (45%), Gaps = 48/314 (15%)
Query: 398 KGFTFELDELLRASAYVLGKSGLGIV----YKVVLGNGIPVAVRRLGEG-GEQRHREFVT 452
+ F E+D V+G G V KV I VA++ L G +++ R+F++
Sbjct: 20 REFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLS 79
Query: 453 EVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLR 512
E + + HPNI+ L ++I++++ NG+L LR +G+ T + LR
Sbjct: 80 EASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGR-FTVIQLVGMLR 138
Query: 513 IAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSG 572
G G+ YL + S VH D+ NIL++++ +SDFG+SR++ ++P ++
Sbjct: 139 ---GIGSGMKYLSDMSA---VHRDLAARNILVNSNLVCKVSDFGMSRVLE---DDPEAAY 189
Query: 573 GFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSP 631
GG +P + APEA + + DV+S+G+V+ E+++ G+ P
Sbjct: 190 TTRGGKIPI----------RWTAPEA-IAYRKFTSASDVWSYGIVMWEVMSYGERPYWDM 238
Query: 632 TTSTSIEVPDLVRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEV 691
+ D+++ +++G+ P+ IA+ L L C + +
Sbjct: 239 SNQ------DVIKAIEEGYRLPPPMDC---------------PIALHQLMLDCWQKERSD 277
Query: 692 RPRMKNVSENLERI 705
RP+ + L+++
Sbjct: 278 RPKFGQIVNMLDKL 291
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 124/263 (47%), Gaps = 33/263 (12%)
Query: 400 FTFELDELLRASAYVLGKSGLGIV----YKVVLGNGIPVAVRRLGEG-GEQRHREFVTEV 454
F ELD V+G G V K+ + VA++ L G E++ R+F+ E
Sbjct: 36 FAKELDASCIKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEA 95
Query: 455 QAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIA 514
+ + HPN+V L +++ +F+ NG L LR +GQ T + LR
Sbjct: 96 SIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQ-FTVIQLVGMLR-- 152
Query: 515 KGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGF 574
G A G+ YL + +VH D+ NIL++++ +SDFGLSR+I ++P +
Sbjct: 153 -GIAAGMRYLADMG---YVHRDLAARNILVNSNLVCKVSDFGLSRVIE---DDPEAVYTT 205
Query: 575 MGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTT 633
GG +P + APEA + + DV+S+G+V+ E+++ G+ P +
Sbjct: 206 TGGKIPV----------RWTAPEA-IQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN 254
Query: 634 STSIEVPDLVRWVKKGFEEENPL 656
D+++ +++G+ P+
Sbjct: 255 Q------DVIKAIEEGYRLPAPM 271
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 106/225 (47%), Gaps = 27/225 (12%)
Query: 80 NVRGYIPSELGSLIYXXXXXXXXXXXFGSLPDQLFNATSLHSIFLYGNNLSGSLPPSVCN 139
N+ G IP + L G++PD L +L ++ N LSG+LPPS+ +
Sbjct: 88 NLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISS 147
Query: 140 LPRLQNLDLSNNSFSGSLPDGLKNCKQL-QRLILARNKFSGQIPAGIWPELENLVQLDLS 198
LP L + N SG++PD + +L + ++RN+ +G+IP + L NL +DLS
Sbjct: 148 LPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPP-TFANL-NLAFVDLS 205
Query: 199 DNDFKG--------------------PIPNDLGELQSLSATLN---LSYNHLSGKIPKSL 235
N +G + DLG++ LS LN L N + G +P+ L
Sbjct: 206 RNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKV-GLSKNLNGLDLRNNRIYGTLPQGL 264
Query: 236 GNLPVTVSFDLRGNNLSGEIPQTGSFANQGPTAFLSNPLLCGFPL 280
L S ++ NNL GEIPQ G+ +A+ +N LCG PL
Sbjct: 265 TQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLCGSPL 309
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 102/219 (46%), Gaps = 36/219 (16%)
Query: 414 VLGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYW 473
V+G+ G+V K VA++++ E + F+ E++ +++V HPNIVKL
Sbjct: 15 VVGRGAFGVVCKAKW-RAKDVAIKQIE--SESERKAFIVELRQLSRVNHPNIVKLYGACL 71
Query: 474 APDEKLLISDFISNGNLANALRGRNGQP----STSLSWSTRLRIAKGTARGLAYLHECSP 529
P L+ ++ G+L N L G P + ++SW + ++G+AYLH P
Sbjct: 72 NP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQ------CSQGVAYLHSMQP 123
Query: 530 RKFVHGDIKPSNILL-DNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTE 588
+ +H D+KP N+LL I DFG + I N S +M
Sbjct: 124 KALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKGSAAWM------------- 170
Query: 589 KTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
APE G+ +K DV+S+G++L E++T + P
Sbjct: 171 ------APEV-FEGSNYSEKCDVFSWGIILWEVITRRKP 202
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 102/219 (46%), Gaps = 36/219 (16%)
Query: 414 VLGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYW 473
V+G+ G+V K VA++++ E + F+ E++ +++V HPNIVKL
Sbjct: 16 VVGRGAFGVVCKAKW-RAKDVAIKQIE--SESERKAFIVELRQLSRVNHPNIVKLYGACL 72
Query: 474 APDEKLLISDFISNGNLANALRGRNGQP----STSLSWSTRLRIAKGTARGLAYLHECSP 529
P L+ ++ G+L N L G P + ++SW + ++G+AYLH P
Sbjct: 73 NP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQ------CSQGVAYLHSMQP 124
Query: 530 RKFVHGDIKPSNILL-DNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTE 588
+ +H D+KP N+LL I DFG + I N S +M
Sbjct: 125 KALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKGSAAWM------------- 171
Query: 589 KTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
APE G+ +K DV+S+G++L E++T + P
Sbjct: 172 ------APEV-FEGSNYSEKCDVFSWGIILWEVITRRKP 203
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 131/307 (42%), Gaps = 54/307 (17%)
Query: 415 LGKSGLGIVYKVVLGNGIP------VAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKL 468
LG+ G V+ N P VAV+ L + + ++F E + + ++H +IVK
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKF 80
Query: 469 RAYYWAPDEKLLISDFISNGNLANALRGR--------NGQPSTSLSWSTRLRIAKGTARG 520
D +++ +++ +G+L LR G P T L+ S L IA+ A G
Sbjct: 81 YGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAG 140
Query: 521 LAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALP 580
+ YL + + FVH D+ N L+ + I DFG+SR ++ + GG +
Sbjct: 141 MVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSR--DVYSTDYYRVGGHTMLPIR 195
Query: 581 YMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTSIEV 639
+M P ++ YR + + DV+S GVVL E+ T GK P + + IE
Sbjct: 196 WMPP----ESIMYR---------KFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIEC 242
Query: 640 PDLVRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVS 699
+ +G + P + QE V+ L L C + +P +R +K +
Sbjct: 243 ------ITQGRVLQRPRT------CPQE---------VYELMLGCWQREPHMRKNIKGIH 281
Query: 700 ENLERIG 706
L+ +
Sbjct: 282 TLLQNLA 288
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 134/293 (45%), Gaps = 46/293 (15%)
Query: 415 LGKSGLGIVYKVVLGN-GIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYW 473
LG G VY+ V + VAV+ L E + EF+ E + ++KHPN+V+L
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 474 APDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFV 533
+I++F++ GNL + LR N Q +++ L +A + + YL + + F+
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECNRQEVSAV---VLLYMATQISSAMEYLEK---KNFI 133
Query: 534 HGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNY 593
H D+ N L+ + ++DFGLSRL +TG+ ++ G P +
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRL--MTGDTYTAHA---GAKFPI----------KW 178
Query: 594 RAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTSIEVPDLVRWVKKGFEE 652
APE+ + N+ K DV++FGV+L E+ T G SP I++ + ++K +
Sbjct: 179 TAPES-LAYNKFSIKSDVWAFGVLLWEIATYGMSP------YPGIDLSQVYELLEKDYRM 231
Query: 653 ENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERI 705
E P E +K V+ L AC + +P RP + + E +
Sbjct: 232 ERP-----------EGCPEK----VYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 134/301 (44%), Gaps = 53/301 (17%)
Query: 414 VLGKSGLGIVYK-VVLGNG----IPVAVRRLGEG-GEQRHREFVTEVQAIAKVKHPNIVK 467
VLG G VYK + + G IPVA++ L E G + + EF+ E +A + HP++V+
Sbjct: 45 VLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVR 104
Query: 468 LRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHEC 527
L +P +L ++ + +G L + + L + ++IAKG + YL E
Sbjct: 105 LLGVCLSPTIQL-VTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKG----MMYLEE- 158
Query: 528 SPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQT 587
R+ VH D+ N+L+ + I+DFGL+RL+ ++ GG M ++ +
Sbjct: 159 --RRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHY 216
Query: 588 EKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT--GKSPELSPTTSTSIEVPDLVRW 645
K + DV+S+GV + EL+T GK + PT E+PDL
Sbjct: 217 RKFTHQS---------------DVWSYGVTIWELMTFGGKPYDGIPTR----EIPDL--- 254
Query: 646 VKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERI 705
++KG P +D V+ + + C D + RP+ K ++ R+
Sbjct: 255 LEKGERLPQPPICTID---------------VYMVMVKCWMIDADSRPKFKELAAEFSRM 299
Query: 706 G 706
Sbjct: 300 A 300
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 95/202 (47%), Gaps = 26/202 (12%)
Query: 434 VAVRRLG-EGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLAN 492
VA++R+ E + E + E+QA+++ HPNIV + DE L+ +S G++ +
Sbjct: 43 VAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLD 102
Query: 493 ALR---GRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQ 549
++ + S L ST I + GL YLH+ +H D+K NILL D
Sbjct: 103 IIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ---IHRDVKAGNILLGEDGS 159
Query: 550 PYISDFGLSRLI----NITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRP 605
I+DFG+S + +IT N + F+G +M P E+ Y
Sbjct: 160 VQIADFGVSAFLATGGDITRNKVRKT--FVGTPC-WMAPEVMEQVRGYDF---------- 206
Query: 606 MQKWDVYSFGVVLLELLTGKSP 627
K D++SFG+ +EL TG +P
Sbjct: 207 --KADIWSFGITAIELATGAAP 226
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 134/293 (45%), Gaps = 46/293 (15%)
Query: 415 LGKSGLGIVYKVVLGN-GIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYW 473
LG G VY+ V + VAV+ L E + EF+ E + ++KHPN+V+L
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 474 APDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFV 533
+I++F++ GNL + LR N Q +++ L +A + + YL + + F+
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECNRQEVSAV---VLLYMATQISSAMEYLEK---KNFI 138
Query: 534 HGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNY 593
H D+ N L+ + ++DFGLSRL +TG+ ++ G P +
Sbjct: 139 HRDLAARNCLVGENHLVKVADFGLSRL--MTGDTYTAHA---GAKFPI----------KW 183
Query: 594 RAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTSIEVPDLVRWVKKGFEE 652
APE+ + N+ K DV++FGV+L E+ T G SP I++ + ++K +
Sbjct: 184 TAPES-LAYNKFSIKSDVWAFGVLLWEIATYGMSP------YPGIDLSQVYELLEKDYRM 236
Query: 653 ENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERI 705
E P E +K V+ L AC + +P RP + + E +
Sbjct: 237 ERP-----------EGCPEK----VYELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 135/301 (44%), Gaps = 53/301 (17%)
Query: 414 VLGKSGLGIVYK-VVLGNG----IPVAVRRLGEG-GEQRHREFVTEVQAIAKVKHPNIVK 467
VLG G VYK + + G IPVA++ L E G + + EF+ E +A + HP++V+
Sbjct: 22 VLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVR 81
Query: 468 LRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHEC 527
L +P +L ++ + +G L + + L + ++IAKG + YL E
Sbjct: 82 LLGVCLSPTIQL-VTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKG----MMYLEE- 135
Query: 528 SPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQT 587
R+ VH D+ N+L+ + I+DFGL+RL+ ++ GG M ++ +
Sbjct: 136 --RRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHY 193
Query: 588 EKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT--GKSPELSPTTSTSIEVPDLVRW 645
K + + DV+S+GV + EL+T GK + PT E+PDL
Sbjct: 194 RKFTH---------------QSDVWSYGVTIWELMTFGGKPYDGIPTR----EIPDL--- 231
Query: 646 VKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERI 705
++KG P +D V+ + + C D + RP+ K ++ R+
Sbjct: 232 LEKGERLPQPPICTID---------------VYMVMVKCWMIDADSRPKFKELAAEFSRM 276
Query: 706 G 706
Sbjct: 277 A 277
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 134/293 (45%), Gaps = 46/293 (15%)
Query: 415 LGKSGLGIVYKVVLGN-GIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYW 473
LG G VY+ V + VAV+ L E + EF+ E + ++KHPN+V+L
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 474 APDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFV 533
+I++F++ GNL + LR N Q +++ L +A + + YL + + F+
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECNRQEVSAV---VLLYMATQISSAMEYLEK---KNFI 133
Query: 534 HGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNY 593
H D+ N L+ + ++DFGLSRL +TG+ ++ G P +
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRL--MTGDTYTAHA---GAKFPI----------KW 178
Query: 594 RAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTSIEVPDLVRWVKKGFEE 652
APE+ + N+ K DV++FGV+L E+ T G SP I++ + ++K +
Sbjct: 179 TAPES-LAYNKFSIKSDVWAFGVLLWEIATYGMSP------YPGIDLSQVYELLEKDYRM 231
Query: 653 ENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERI 705
E P E +K V+ L AC + +P RP + + E +
Sbjct: 232 ERP-----------EGCPEK----VYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 95/202 (47%), Gaps = 26/202 (12%)
Query: 434 VAVRRLG-EGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLAN 492
VA++R+ E + E + E+QA+++ HPNIV + DE L+ +S G++ +
Sbjct: 38 VAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLD 97
Query: 493 ALR---GRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQ 549
++ + S L ST I + GL YLH+ +H D+K NILL D
Sbjct: 98 IIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ---IHRDVKAGNILLGEDGS 154
Query: 550 PYISDFGLSRLI----NITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRP 605
I+DFG+S + +IT N + F+G +M P E+ Y
Sbjct: 155 VQIADFGVSAFLATGGDITRNKVRKT--FVGTPC-WMAPEVMEQVRGYDF---------- 201
Query: 606 MQKWDVYSFGVVLLELLTGKSP 627
K D++SFG+ +EL TG +P
Sbjct: 202 --KADIWSFGITAIELATGAAP 221
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 133/293 (45%), Gaps = 46/293 (15%)
Query: 415 LGKSGLGIVYKVVLGN-GIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYW 473
LG G VY+ V + VAV+ L E + EF+ E + ++KHPN+V+L
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 474 APDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFV 533
+I++F++ GNL + LR N Q ++ L +A + + YL + + F+
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECNRQEVNAV---VLLYMATQISSAMEYLEK---KNFI 138
Query: 534 HGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNY 593
H D+ N L+ + ++DFGLSRL +TG+ ++ G P +
Sbjct: 139 HRDLAARNCLVGENHLVKVADFGLSRL--MTGDTXTAHA---GAKFPI----------KW 183
Query: 594 RAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTSIEVPDLVRWVKKGFEE 652
APE+ + N+ K DV++FGV+L E+ T G SP I++ + ++K +
Sbjct: 184 TAPES-LAYNKFSIKSDVWAFGVLLWEIATYGMSP------YPGIDLSQVYELLEKDYRM 236
Query: 653 ENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERI 705
E P E +K V+ L AC + +P RP + + E +
Sbjct: 237 ERP-----------EGCPEK----VYELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 133/293 (45%), Gaps = 46/293 (15%)
Query: 415 LGKSGLGIVYKVVLGN-GIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYW 473
LG G VY+ V + VAV+ L E + EF+ E + ++KHPN+V+L
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 474 APDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFV 533
+I++F++ GNL + LR N Q ++ L +A + + YL + + F+
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECNRQEVNAV---VLLYMATQISSAMEYLEK---KNFI 138
Query: 534 HGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNY 593
H D+ N L+ + ++DFGLSRL +TG+ ++ G P +
Sbjct: 139 HRDLAARNCLVGENHLVKVADFGLSRL--MTGDTYTAHA---GAKFPI----------KW 183
Query: 594 RAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTSIEVPDLVRWVKKGFEE 652
APE+ + N+ K DV++FGV+L E+ T G SP I++ + ++K +
Sbjct: 184 TAPES-LAYNKFSIKSDVWAFGVLLWEIATYGMSP------YPGIDLSQVYELLEKDYRM 236
Query: 653 ENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERI 705
E P E +K V+ L AC + +P RP + + E +
Sbjct: 237 ERP-----------EGCPEK----VYELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 133/293 (45%), Gaps = 46/293 (15%)
Query: 415 LGKSGLGIVYKVVLGN-GIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYW 473
LG G VY+ V + VAV+ L E + EF+ E + ++KHPN+V+L
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 474 APDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFV 533
+I++F++ GNL + LR N Q ++ L +A + + YL + + F+
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECNRQEVNAV---VLLYMATQISSAMEYLEK---KNFI 138
Query: 534 HGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNY 593
H D+ N L+ + ++DFGLSRL +TG+ ++ G P +
Sbjct: 139 HRDLAARNCLVGENHLVKVADFGLSRL--MTGDTYTAHA---GAKFPI----------KW 183
Query: 594 RAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTSIEVPDLVRWVKKGFEE 652
APE+ + N+ K DV++FGV+L E+ T G SP I++ + ++K +
Sbjct: 184 TAPES-LAYNKFSIKSDVWAFGVLLWEIATYGMSP------YPGIDLSQVYELLEKDYRM 236
Query: 653 ENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERI 705
E P E +K V+ L AC + +P RP + + E +
Sbjct: 237 ERP-----------EGCPEK----VYELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 133/293 (45%), Gaps = 46/293 (15%)
Query: 415 LGKSGLGIVYKVVLGN-GIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYW 473
LG G VY+ V + VAV+ L E + EF+ E + ++KHPN+V+L
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 92
Query: 474 APDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFV 533
+I++F++ GNL + LR N Q ++ L +A + + YL + + F+
Sbjct: 93 REPPFYIITEFMTYGNLLDYLRECNRQEVNAV---VLLYMATQISSAMEYLEK---KNFI 146
Query: 534 HGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNY 593
H D+ N L+ + ++DFGLSRL +TG+ ++ G P +
Sbjct: 147 HRDLAARNCLVGENHLVKVADFGLSRL--MTGDTYTAHA---GAKFPI----------KW 191
Query: 594 RAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTSIEVPDLVRWVKKGFEE 652
APE+ + N+ K DV++FGV+L E+ T G SP I++ + ++K +
Sbjct: 192 TAPES-LAYNKFSIKSDVWAFGVLLWEIATYGMSP------YPGIDLSQVYELLEKDYRM 244
Query: 653 ENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERI 705
E P E +K V+ L AC + +P RP + + E +
Sbjct: 245 ERP-----------EGCPEK----VYELMRACWQWNPSDRPSFAEIHQAFETM 282
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 133/293 (45%), Gaps = 46/293 (15%)
Query: 415 LGKSGLGIVYKVVLGN-GIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYW 473
LG G VY+ V + VAV+ L E + EF+ E + ++KHPN+V+L
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 474 APDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFV 533
+I++F++ GNL + LR N Q ++ L +A + + YL + + F+
Sbjct: 82 REPPFYIITEFMTYGNLLDYLRECNRQEVNAV---VLLYMATQISSAMEYLEK---KNFI 135
Query: 534 HGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNY 593
H D+ N L+ + ++DFGLSRL +TG+ ++ G P +
Sbjct: 136 HRDLAARNCLVGENHLVKVADFGLSRL--MTGDTYTAHA---GAKFPI----------KW 180
Query: 594 RAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTSIEVPDLVRWVKKGFEE 652
APE+ + N+ K DV++FGV+L E+ T G SP I++ + ++K +
Sbjct: 181 TAPES-LAYNKFSIKSDVWAFGVLLWEIATYGMSP------YPGIDLSQVYELLEKDYRM 233
Query: 653 ENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERI 705
E P E +K V+ L AC + +P RP + + E +
Sbjct: 234 ERP-----------EGCPEK----VYELMRACWQWNPSDRPSFAEIHQAFETM 271
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 133/293 (45%), Gaps = 46/293 (15%)
Query: 415 LGKSGLGIVYKVVLGN-GIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYW 473
LG G VY+ V + VAV+ L E + EF+ E + ++KHPN+V+L
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 474 APDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFV 533
+I++F++ GNL + LR N Q ++ L +A + + YL + + F+
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECNRQEVNAV---VLLYMATQISSAMEYLEK---KNFI 133
Query: 534 HGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNY 593
H D+ N L+ + ++DFGLSRL +TG+ ++ G P +
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRL--MTGDTYTAHA---GAKFPI----------KW 178
Query: 594 RAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTSIEVPDLVRWVKKGFEE 652
APE+ + N+ K DV++FGV+L E+ T G SP I++ + ++K +
Sbjct: 179 TAPES-LAYNKFSIKSDVWAFGVLLWEIATYGMSP------YPGIDLSQVYELLEKDYRM 231
Query: 653 ENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERI 705
E P E +K V+ L AC + +P RP + + E +
Sbjct: 232 ERP-----------EGCPEK----VYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 133/293 (45%), Gaps = 46/293 (15%)
Query: 415 LGKSGLGIVYKVVLGN-GIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYW 473
LG G VY+ V + VAV+ L E + EF+ E + ++KHPN+V+L
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 474 APDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFV 533
+I++F++ GNL + LR N Q ++ L +A + + YL + + F+
Sbjct: 82 REPPFYIITEFMTYGNLLDYLRECNRQEVNAV---VLLYMATQISSAMEYLEK---KNFI 135
Query: 534 HGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNY 593
H D+ N L+ + ++DFGLSRL +TG+ ++ G P +
Sbjct: 136 HRDLAARNCLVGENHLVKVADFGLSRL--MTGDTYTAHA---GAKFPI----------KW 180
Query: 594 RAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTSIEVPDLVRWVKKGFEE 652
APE+ + N+ K DV++FGV+L E+ T G SP I++ + ++K +
Sbjct: 181 TAPES-LAYNKFSIKSDVWAFGVLLWEIATYGMSP------YPGIDLSQVYELLEKDYRM 233
Query: 653 ENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERI 705
E P E +K V+ L AC + +P RP + + E +
Sbjct: 234 ERP-----------EGCPEK----VYELMRACWQWNPSDRPSFAEIHQAFETM 271
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 133/293 (45%), Gaps = 46/293 (15%)
Query: 415 LGKSGLGIVYKVVLGN-GIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYW 473
LG G VY+ V + VAV+ L E + EF+ E + ++KHPN+V+L
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 474 APDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFV 533
+I++F++ GNL + LR N Q ++ L +A + + YL + + F+
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECNRQEVNAV---VLLYMATQISSAMEYLEK---KNFI 133
Query: 534 HGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNY 593
H D+ N L+ + ++DFGLSRL +TG+ ++ G P +
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRL--MTGDTYTAHA---GAKFPI----------KW 178
Query: 594 RAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTSIEVPDLVRWVKKGFEE 652
APE+ + N+ K DV++FGV+L E+ T G SP I++ + ++K +
Sbjct: 179 TAPES-LAYNKFSIKSDVWAFGVLLWEIATYGMSP------YPGIDLSQVYELLEKDYRM 231
Query: 653 ENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERI 705
E P E +K V+ L AC + +P RP + + E +
Sbjct: 232 ERP-----------EGCPEK----VYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 133/293 (45%), Gaps = 46/293 (15%)
Query: 415 LGKSGLGIVYKVVLGN-GIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYW 473
LG G VY+ V + VAV+ L E + EF+ E + ++KHPN+V+L
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 474 APDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFV 533
+I++F++ GNL + LR N Q +++ L +A + + YL + + F+
Sbjct: 78 REPPFYIITEFMTYGNLLDYLRECNRQEVSAV---VLLYMATQISSAMEYLEK---KNFI 131
Query: 534 HGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNY 593
H D+ N L+ + ++DFGLSRL +TG+ ++ G P +
Sbjct: 132 HRDLAARNCLVGENHLVKVADFGLSRL--MTGDTXTAHA---GAKFPI----------KW 176
Query: 594 RAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTSIEVPDLVRWVKKGFEE 652
APE+ + N+ K DV++FGV+L E+ T G SP I+ + ++K +
Sbjct: 177 TAPES-LAYNKFSIKSDVWAFGVLLWEIATYGMSP------YPGIDPSQVYELLEKDYRM 229
Query: 653 ENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERI 705
E P E +K V+ L AC + +P RP + + E +
Sbjct: 230 ERP-----------EGCPEK----VYELMRACWQWNPSDRPSFAEIHQAFETM 267
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 133/293 (45%), Gaps = 46/293 (15%)
Query: 415 LGKSGLGIVYKVVLGN-GIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYW 473
LG G VY+ V + VAV+ L E + EF+ E + ++KHPN+V+L
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 83
Query: 474 APDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFV 533
+I++F++ GNL + LR N Q ++ L +A + + YL + + F+
Sbjct: 84 REPPFYIITEFMTYGNLLDYLRECNRQEVNAV---VLLYMATQISSAMEYLEK---KNFI 137
Query: 534 HGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNY 593
H D+ N L+ + ++DFGLSRL +TG+ ++ G P +
Sbjct: 138 HRDLAARNCLVGENHLVKVADFGLSRL--MTGDTYTAHA---GAKFPI----------KW 182
Query: 594 RAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTSIEVPDLVRWVKKGFEE 652
APE+ + N+ K DV++FGV+L E+ T G SP I++ + ++K +
Sbjct: 183 TAPES-LAYNKFSIKSDVWAFGVLLWEIATYGMSP------YPGIDLSQVYELLEKDYRM 235
Query: 653 ENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERI 705
E P E +K V+ L AC + +P RP + + E +
Sbjct: 236 ERP-----------EGCPEK----VYELMRACWQWNPSDRPSFAEIHQAFETM 273
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 132/293 (45%), Gaps = 46/293 (15%)
Query: 415 LGKSGLGIVYKVVLGN-GIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYW 473
LG G VY+ V + VAV+ L E + EF+ E + ++KHPN+V+L
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 80
Query: 474 APDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFV 533
+I++F++ GNL + LR N Q ++ L +A + + YL + + F+
Sbjct: 81 REPPFYIITEFMTYGNLLDYLRECNRQEVNAV---VLLYMATQISSAMEYLEK---KNFI 134
Query: 534 HGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNY 593
H D+ N L+ + ++DFGLSRL +TG+ Y P + +
Sbjct: 135 HRDLAARNCLVGENHLVKVADFGLSRL--MTGDT-------------YTAPAGAKFPIKW 179
Query: 594 RAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTSIEVPDLVRWVKKGFEE 652
APE+ + N+ K DV++FGV+L E+ T G SP I++ + ++K +
Sbjct: 180 TAPES-LAYNKFSIKSDVWAFGVLLWEIATYGMSP------YPGIDLSQVYELLEKDYRM 232
Query: 653 ENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERI 705
E P E +K V+ L AC + +P RP + + E +
Sbjct: 233 ERP-----------EGCPEK----VYELMRACWQWNPSDRPSFAEIHQAFETM 270
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 132/293 (45%), Gaps = 46/293 (15%)
Query: 415 LGKSGLGIVYKVVLGN-GIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYW 473
LG G VY+ V + VAV+ L E + EF+ E + ++KHPN+V+L
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 474 APDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFV 533
+I++F++ GNL + LR N Q ++ L +A + + YL + + F+
Sbjct: 82 REPPFYIITEFMTYGNLLDYLRECNRQEVNAV---VLLYMATQISSAMEYLEK---KNFI 135
Query: 534 HGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNY 593
H D+ N L+ + ++DFGLSRL +TG+ Y P + +
Sbjct: 136 HRDLAARNCLVGENHLVKVADFGLSRL--MTGDT-------------YTAPAGAKFPIKW 180
Query: 594 RAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTSIEVPDLVRWVKKGFEE 652
APE+ + N+ K DV++FGV+L E+ T G SP I++ + ++K +
Sbjct: 181 TAPES-LAYNKFSIKSDVWAFGVLLWEIATYGMSP------YPGIDLSQVYELLEKDYRM 233
Query: 653 ENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERI 705
E P E +K V+ L AC + +P RP + + E +
Sbjct: 234 ERP-----------EGCPEK----VYELMRACWQWNPSDRPSFAEIHQAFETM 271
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 134/290 (46%), Gaps = 46/290 (15%)
Query: 415 LGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWA 474
LG G V+ VA++ L + G F+ E Q + K+KH +V+L A +
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTL-KPGTMSPESFLEEAQIMKKLKHDKLVQLYAVV-S 74
Query: 475 PDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVH 534
+ +++++++ G+L + L+ G+ +L + +A A G+AY+ + ++H
Sbjct: 75 EEPIYIVTEYMNKGSLLDFLKDGEGR---ALKLPNLVDMAAQVAAGMAYIERMN---YIH 128
Query: 535 GDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYR 594
D++ +NIL+ N I+DFGL+RLI F P++ +
Sbjct: 129 RDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKF---------PIK------WT 173
Query: 595 APEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTSIEVPDLVRWVKKGFEEE 653
APEA + G R K DV+SFG++L EL+T G+ P P + +++ V++G+
Sbjct: 174 APEAALYG-RFTIKSDVWSFGILLTELVTKGRVP--YPGMNNR----EVLEQVERGYRMP 226
Query: 654 NPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLE 703
P + I++ L + C + DPE RP + + LE
Sbjct: 227 CP---------------QDCPISLHELMIHCWKKDPEERPTFEYLQSFLE 261
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 133/293 (45%), Gaps = 46/293 (15%)
Query: 415 LGKSGLGIVYKVVLGN-GIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYW 473
LG G VY+ V + VAV+ L E + EF+ E + ++KHPN+V+L
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 474 APDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFV 533
+I +F++ GNL + LR N Q +++ L +A + + YL + + F+
Sbjct: 80 REPPFYIIIEFMTYGNLLDYLRECNRQEVSAV---VLLYMATQISSAMEYLEK---KNFI 133
Query: 534 HGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNY 593
H D+ N L+ + ++DFGLSRL +TG+ ++ G P +
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRL--MTGDTYTAHA---GAKFPI----------KW 178
Query: 594 RAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTSIEVPDLVRWVKKGFEE 652
APE+ + N+ K DV++FGV+L E+ T G SP I++ + ++K +
Sbjct: 179 TAPES-LAYNKFSIKSDVWAFGVLLWEIATYGMSP------YPGIDLSQVYELLEKDYRM 231
Query: 653 ENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERI 705
E P E +K V+ L AC + +P RP + + E +
Sbjct: 232 ERP-----------EGCPEK----VYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 133/293 (45%), Gaps = 46/293 (15%)
Query: 415 LGKSGLGIVYKVVLGN-GIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYW 473
LG G VY+ V + VAV+ L E + EF+ E + ++KHPN+V+L
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 474 APDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFV 533
+I +F++ GNL + LR N Q +++ L +A + + YL + + F+
Sbjct: 80 REPPFYIIIEFMTYGNLLDYLRECNRQEVSAV---VLLYMATQISSAMEYLEK---KNFI 133
Query: 534 HGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNY 593
H D+ N L+ + ++DFGLSRL +TG+ ++ G P +
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRL--MTGDTYTAHA---GAKFPI----------KW 178
Query: 594 RAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTSIEVPDLVRWVKKGFEE 652
APE+ + N+ K DV++FGV+L E+ T G SP I++ + ++K +
Sbjct: 179 TAPES-LAYNKFSIKSDVWAFGVLLWEIATYGMSP------YPGIDLSQVYELLEKDYRM 231
Query: 653 ENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERI 705
E P E +K V+ L AC + +P RP + + E +
Sbjct: 232 ERP-----------EGCPEK----VYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 85/322 (26%), Positives = 136/322 (42%), Gaps = 46/322 (14%)
Query: 390 EGELVAIDKGFTFELDELLRASAYVLGKSGLGIVYKVVL----GNGIPVAVRRLGEGGEQ 445
+ L+A K + ++ S V+GK G+VY N I A++ L E
Sbjct: 4 DSALLAEVKDVLIPHERVVTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEM 63
Query: 446 RHRE-FVTEVQAIAKVKHPNIVKLRAYYWAPD-EKLLISDFISNGNLANALRGRNGQPST 503
+ E F+ E + + HPN++ L P+ ++ ++ +G+L +R P+
Sbjct: 64 QQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTV 123
Query: 504 SLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINI 563
S L++A RG+ YL E +KFVH D+ N +LD F ++DFGL+R +I
Sbjct: 124 KDLISFGLQVA----RGMEYLAE---QKFVHRDLAARNCMLDESFTVKVADFGLAR--DI 174
Query: 564 TGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT 623
S LP +K E YR K DV+SFGV+L ELLT
Sbjct: 175 LDREYYSVQQHRHARLP-VKWTALESLQTYRF----------TTKSDVWSFGVLLWELLT 223
Query: 624 GKSPELSPTTSTSIEVPDLVRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALA 683
+P I+ DL ++ +G P + +++ +
Sbjct: 224 RGAPPYR-----HIDPFDLTHFLAQGRRLPQP---------------EYCPDSLYQVMQQ 263
Query: 684 CTEADPEVRPRMKNVSENLERI 705
C EADP VRP + + +E+I
Sbjct: 264 CWEADPAVRPTFRVLVGEVEQI 285
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 132/293 (45%), Gaps = 46/293 (15%)
Query: 415 LGKSGLGIVYKVVLGN-GIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYW 473
LG G VY+ V + VAV+ L E + EF+ E + ++KHPN+V+L
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 80
Query: 474 APDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFV 533
+I +F++ GNL + LR N Q ++ L +A + + YL + + F+
Sbjct: 81 REPPFYIIIEFMTYGNLLDYLRECNRQEVNAV---VLLYMATQISSAMEYLEK---KNFI 134
Query: 534 HGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNY 593
H D+ N L+ + ++DFGLSRL +TG+ ++ G P +
Sbjct: 135 HRDLAARNCLVGENHLVKVADFGLSRL--MTGDTXTAHA---GAKFPI----------KW 179
Query: 594 RAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTSIEVPDLVRWVKKGFEE 652
APE+ + N+ K DV++FGV+L E+ T G SP I++ + ++K +
Sbjct: 180 TAPES-LAYNKFSIKSDVWAFGVLLWEIATYGMSP------YPGIDLSQVYELLEKDYRM 232
Query: 653 ENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERI 705
E P E +K V+ L AC + +P RP + + E +
Sbjct: 233 ERP-----------EGCPEK----VYELMRACWQWNPSDRPSFAEIHQAFETM 270
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 132/293 (45%), Gaps = 46/293 (15%)
Query: 415 LGKSGLGIVYKVVLGN-GIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYW 473
LG G VY+ V + VAV+ L E + EF+ E + ++KHPN+V+L
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 474 APDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFV 533
+I +F++ GNL + LR N Q ++ L +A + + YL + + F+
Sbjct: 85 REPPFYIIIEFMTYGNLLDYLRECNRQEVNAV---VLLYMATQISSAMEYLEK---KNFI 138
Query: 534 HGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNY 593
H D+ N L+ + ++DFGLSRL +TG+ ++ G P +
Sbjct: 139 HRDLAARNCLVGENHLVKVADFGLSRL--MTGDTYTAHA---GAKFPI----------KW 183
Query: 594 RAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTSIEVPDLVRWVKKGFEE 652
APE+ + N+ K DV++FGV+L E+ T G SP I++ + ++K +
Sbjct: 184 TAPES-LAYNKFSIKSDVWAFGVLLWEIATYGMSP------YPGIDLSQVYELLEKDYRM 236
Query: 653 ENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERI 705
E P E +K V+ L AC + +P RP + + E +
Sbjct: 237 ERP-----------EGCPEK----VYELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 99/225 (44%), Gaps = 36/225 (16%)
Query: 414 VLGKSGLGIVYKVV-LGNGIPVAVRRLG--EGGEQRHREFVTEVQAIAKVKHPNIVKLRA 470
++G G G VY+ +G+ + V R E Q E + A +KHPNI+ LR
Sbjct: 14 IIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRG 73
Query: 471 YYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPR 530
L+ +F G L L G+ P ++W+ ++ ARG+ YLH+ +
Sbjct: 74 VCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQI------ARGMNYLHDEAIV 127
Query: 531 KFVHGDIKPSNILLDNDFQ--------PYISDFGLSRLINITGNNPSSSGGFMGGALPYM 582
+H D+K SNIL+ + I+DFGL+R + T ++ GA +M
Sbjct: 128 PIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSAA------GAYAWM 181
Query: 583 KPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
P + + DV+S+GV+L ELLTG+ P
Sbjct: 182 APEVIRASMFSKGS-------------DVWSYGVLLWELLTGEVP 213
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 98/217 (45%), Gaps = 28/217 (12%)
Query: 415 LGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWA 474
+G G VYK + V + + Q+ + F EV + K +H NI+ Y A
Sbjct: 32 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA 91
Query: 475 PDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVH 534
P + +++ + +L + L T + IA+ TARG+ YLH + +H
Sbjct: 92 P-QLAIVTQWCEGSSLYHHLHA----SETKFEMKKLIDIARQTARGMDYLH---AKSIIH 143
Query: 535 GDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGF--MGGALPYMKP--VQTEKT 590
D+K +NI L D I DFGL+ + S S F + G++ +M P ++ + +
Sbjct: 144 RDLKSNNIFLHEDNTVKIGDFGLA----TEKSRWSGSHQFEQLSGSILWMAPEVIRMQDS 199
Query: 591 NNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
N Y DVY+FG+VL EL+TG+ P
Sbjct: 200 NPYSFQS------------DVYAFGIVLYELMTGQLP 224
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 133/293 (45%), Gaps = 46/293 (15%)
Query: 415 LGKSGLGIVYKVVLGN-GIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYW 473
LG G VY+ V + VAV+ L E + EF+ E + ++KHPN+V+L
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 474 APDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFV 533
+I++F++ GNL + LR N Q +++ L +A + + YL + + F+
Sbjct: 78 REPPFYIITEFMTYGNLLDYLRECNRQEVSAV---VLLYMATQISSAMEYLEK---KNFI 131
Query: 534 HGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNY 593
H D+ N L+ + ++DFGLSRL +TG+ ++ G P +
Sbjct: 132 HRDLAARNCLVGENHLVKVADFGLSRL--MTGDTFTAHA---GAKFPI----------KW 176
Query: 594 RAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTSIEVPDLVRWVKKGFEE 652
APE+ + N+ K DV++FGV+L E+ T G SP I+ + ++K +
Sbjct: 177 TAPES-LAYNKFSIKSDVWAFGVLLWEIATYGMSP------YPGIDPSQVYELLEKDYRM 229
Query: 653 ENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERI 705
E P E +K V+ L AC + +P RP + + E +
Sbjct: 230 ERP-----------EGCPEK----VYELMRACWQWNPSDRPSFAEIHQAFETM 267
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 132/293 (45%), Gaps = 46/293 (15%)
Query: 415 LGKSGLGIVYKVVLGN-GIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYW 473
LG G VY+ V + VAV+ L E + EF+ E + ++KHPN+V+L
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 474 APDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFV 533
+I +F++ GNL + LR N Q +++ L +A + + YL + + F+
Sbjct: 78 REPPFYIIIEFMTYGNLLDYLRECNRQEVSAV---VLLYMATQISSAMEYLEK---KNFI 131
Query: 534 HGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNY 593
H D+ N L+ + ++DFGLSRL +TG+ ++ G P +
Sbjct: 132 HRDLAARNCLVGENHLVKVADFGLSRL--MTGDTXTAHA---GAKFPI----------KW 176
Query: 594 RAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTSIEVPDLVRWVKKGFEE 652
APE+ + N+ K DV++FGV+L E+ T G SP S E+ ++K +
Sbjct: 177 TAPES-LAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYEL------LEKDYRM 229
Query: 653 ENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERI 705
E P E +K V+ L AC + +P RP + + E +
Sbjct: 230 ERP-----------EGCPEK----VYELMRACWQWNPSDRPSFAEIHQAFETM 267
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 139/306 (45%), Gaps = 46/306 (15%)
Query: 402 FELDELLRASAYVLGKSGLGIVYKVVLGN-GIPVAVRRLGEGGEQRHREFVTEVQAIAKV 460
+E++ + LG G VY+ V + VAV+ L E + EF+ E + ++
Sbjct: 215 WEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEI 273
Query: 461 KHPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARG 520
KHPN+V+L +I++F++ GNL + LR N Q +++ L +A +
Sbjct: 274 KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAV---VLLYMATQISSA 330
Query: 521 LAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALP 580
+ YL + + F+H ++ N L+ + ++DFGLSRL +TG+ ++ G P
Sbjct: 331 MEYLEK---KNFIHRNLAARNCLVGENHLVKVADFGLSRL--MTGDTYTAHA---GAKFP 382
Query: 581 YMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTSIEV 639
+ APE+ + N+ K DV++FGV+L E+ T G SP I++
Sbjct: 383 I----------KWTAPES-LAYNKFSIKSDVWAFGVLLWEIATYGMSP------YPGIDL 425
Query: 640 PDLVRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVS 699
+ ++K + E P E +K V+ L AC + +P RP +
Sbjct: 426 SQVYELLEKDYRMERP-----------EGCPEK----VYELMRACWQWNPSDRPSFAEIH 470
Query: 700 ENLERI 705
+ E +
Sbjct: 471 QAFETM 476
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 106/214 (49%), Gaps = 25/214 (11%)
Query: 415 LGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWA 474
LG+ G V+ VA++ L + G F+ E Q + K++H +V+L A +
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 249
Query: 475 PDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVH 534
+ ++++++S G+L + L+G G+ L + +A A G+AY+ + +VH
Sbjct: 250 EEPIYIVTEYMSKGSLLDFLKGETGK---YLRLPQLVDMAAQIASGMAYVERMN---YVH 303
Query: 535 GDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYR 594
D++ +NIL+ + ++DFGL+RLI F P++ +
Sbjct: 304 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF---------PIK------WT 348
Query: 595 APEARVPGNRPMQKWDVYSFGVVLLELLT-GKSP 627
APEA + G R K DV+SFG++L EL T G+ P
Sbjct: 349 APEAALYG-RFTIKSDVWSFGILLTELTTKGRVP 381
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 106/214 (49%), Gaps = 25/214 (11%)
Query: 415 LGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWA 474
LG+ G V+ VA++ L + G F+ E Q + K++H +V+L A +
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 249
Query: 475 PDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVH 534
+ ++++++S G+L + L+G G+ L + +A A G+AY+ + +VH
Sbjct: 250 EEPIYIVTEYMSKGSLLDFLKGETGK---YLRLPQLVDMAAQIASGMAYVERMN---YVH 303
Query: 535 GDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYR 594
D++ +NIL+ + ++DFGL+RLI F P++ +
Sbjct: 304 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF---------PIK------WT 348
Query: 595 APEARVPGNRPMQKWDVYSFGVVLLELLT-GKSP 627
APEA + G R K DV+SFG++L EL T G+ P
Sbjct: 349 APEAALYG-RFTIKSDVWSFGILLTELTTKGRVP 381
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 106/214 (49%), Gaps = 25/214 (11%)
Query: 415 LGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWA 474
LG+ G V+ VA++ L + G F+ E Q + K++H +V+L A +
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 73
Query: 475 PDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVH 534
+ ++++++S G+L + L+G G+ L + +A A G+AY+ + +VH
Sbjct: 74 EEPIXIVTEYMSKGSLLDFLKGETGK---YLRLPQLVDMAAQIASGMAYVERMN---YVH 127
Query: 535 GDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYR 594
D++ +NIL+ + ++DFGL+RLI F P++ +
Sbjct: 128 RDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKF---------PIK------WT 172
Query: 595 APEARVPGNRPMQKWDVYSFGVVLLELLT-GKSP 627
APEA + G R K DV+SFG++L EL T G+ P
Sbjct: 173 APEAALYG-RFTIKSDVWSFGILLTELTTKGRVP 205
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 106/214 (49%), Gaps = 25/214 (11%)
Query: 415 LGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWA 474
LG+ G V+ VA++ L + G F+ E Q + K++H +V+L A +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKIRHEKLVQLYAVV-S 83
Query: 475 PDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVH 534
+ ++++++S G+L + L+G G+ L + +A A G+AY+ + +VH
Sbjct: 84 EEPIYIVTEYMSKGSLLDFLKGEMGK---YLRLPQLVDMAAQIASGMAYVERMN---YVH 137
Query: 535 GDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYR 594
D++ +NIL+ + ++DFGL+RLI F P++ +
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF---------PIK------WT 182
Query: 595 APEARVPGNRPMQKWDVYSFGVVLLELLT-GKSP 627
APEA + G R K DV+SFG++L EL T G+ P
Sbjct: 183 APEAALYG-RFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 98/217 (45%), Gaps = 28/217 (12%)
Query: 415 LGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWA 474
+G G VYK + V + + Q+ + F EV + K +H NI+ Y
Sbjct: 20 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 79
Query: 475 PDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVH 534
P + +++ + +L + L T + IA+ TARG+ YLH + +H
Sbjct: 80 P-QLAIVTQWCEGSSLYHHLHA----SETKFEMKKLIDIARQTARGMDYLH---AKSIIH 131
Query: 535 GDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGF--MGGALPYMKP--VQTEKT 590
D+K +NI L D I DFGL+ + + S S F + G++ +M P ++ + +
Sbjct: 132 RDLKSNNIFLHEDNTVKIGDFGLATV----KSRWSGSHQFEQLSGSILWMAPEVIRMQDS 187
Query: 591 NNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
N Y DVY+FG+VL EL+TG+ P
Sbjct: 188 NPYSFQS------------DVYAFGIVLYELMTGQLP 212
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 106/214 (49%), Gaps = 25/214 (11%)
Query: 415 LGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWA 474
LG+ G V+ VA++ L + G F+ E Q + K++H +V+L A +
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 76
Query: 475 PDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVH 534
+ ++++++S G+L + L+G G+ L + +A A G+AY+ + +VH
Sbjct: 77 EEPIYIVTEYMSKGSLLDFLKGETGK---YLRLPQLVDMAAQIASGMAYVERMN---YVH 130
Query: 535 GDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYR 594
D++ +NIL+ + ++DFGL+RLI F P++ +
Sbjct: 131 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF---------PIK------WT 175
Query: 595 APEARVPGNRPMQKWDVYSFGVVLLELLT-GKSP 627
APEA + G R K DV+SFG++L EL T G+ P
Sbjct: 176 APEAALYG-RFTIKSDVWSFGILLTELTTKGRVP 208
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 105/214 (49%), Gaps = 25/214 (11%)
Query: 415 LGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWA 474
LG+ G V+ VA++ L + G F+ E Q + K++H +V+L A +
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 249
Query: 475 PDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVH 534
+ ++ +++S G+L + L+G G+ L + +A A G+AY+ + +VH
Sbjct: 250 EEPIYIVGEYMSKGSLLDFLKGETGK---YLRLPQLVDMAAQIASGMAYVERMN---YVH 303
Query: 535 GDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYR 594
D++ +NIL+ + ++DFGL+RLI F P++ +
Sbjct: 304 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF---------PIK------WT 348
Query: 595 APEARVPGNRPMQKWDVYSFGVVLLELLT-GKSP 627
APEA + G R K DV+SFG++L EL T G+ P
Sbjct: 349 APEAALYG-RFTIKSDVWSFGILLTELTTKGRVP 381
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 106/214 (49%), Gaps = 25/214 (11%)
Query: 415 LGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWA 474
LG+ G V+ VA++ L + G F+ E Q + K++H +V+L A +
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 332
Query: 475 PDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVH 534
+ ++++++S G+L + L+G G+ L + +A A G+AY+ + +VH
Sbjct: 333 EEPIYIVTEYMSKGSLLDFLKGETGK---YLRLPQLVDMAAQIASGMAYVERMN---YVH 386
Query: 535 GDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYR 594
D++ +NIL+ + ++DFGL+RLI F P++ +
Sbjct: 387 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF---------PIK------WT 431
Query: 595 APEARVPGNRPMQKWDVYSFGVVLLELLT-GKSP 627
APEA + G R K DV+SFG++L EL T G+ P
Sbjct: 432 APEAALYG-RFTIKSDVWSFGILLTELTTKGRVP 464
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 138/306 (45%), Gaps = 46/306 (15%)
Query: 402 FELDELLRASAYVLGKSGLGIVYKVVLGN-GIPVAVRRLGEGGEQRHREFVTEVQAIAKV 460
+E++ + LG G VY+ V + VAV+ L E + EF+ E + ++
Sbjct: 254 WEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEI 312
Query: 461 KHPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARG 520
KHPN+V+L +I++F++ GNL + LR N Q ++ L +A +
Sbjct: 313 KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV---VLLYMATQISSA 369
Query: 521 LAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALP 580
+ YL + + F+H ++ N L+ + ++DFGLSRL +TG+ ++ G P
Sbjct: 370 MEYLEK---KNFIHRNLAARNCLVGENHLVKVADFGLSRL--MTGDTYTAHA---GAKFP 421
Query: 581 YMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTSIEV 639
+ APE+ + N+ K DV++FGV+L E+ T G SP I++
Sbjct: 422 I----------KWTAPES-LAYNKFSIKSDVWAFGVLLWEIATYGMSP------YPGIDL 464
Query: 640 PDLVRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVS 699
+ ++K + E P E +K V+ L AC + +P RP +
Sbjct: 465 SQVYELLEKDYRMERP-----------EGCPEK----VYELMRACWQWNPSDRPSFAEIH 509
Query: 700 ENLERI 705
+ E +
Sbjct: 510 QAFETM 515
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 97/217 (44%), Gaps = 28/217 (12%)
Query: 415 LGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWA 474
+G G VYK + V + + Q+ + F EV + K +H NI+ Y
Sbjct: 32 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 91
Query: 475 PDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVH 534
P + +++ + +L + L T + IA+ TARG+ YLH + +H
Sbjct: 92 P-QLAIVTQWCEGSSLYHHLHA----SETKFEMKKLIDIARQTARGMDYLH---AKSIIH 143
Query: 535 GDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGF--MGGALPYMKP--VQTEKT 590
D+K +NI L D I DFGL+ + S S F + G++ +M P ++ + +
Sbjct: 144 RDLKSNNIFLHEDNTVKIGDFGLA----TEKSRWSGSHQFEQLSGSILWMAPEVIRMQDS 199
Query: 591 NNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
N Y DVY+FG+VL EL+TG+ P
Sbjct: 200 NPYSFQS------------DVYAFGIVLYELMTGQLP 224
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 138/306 (45%), Gaps = 46/306 (15%)
Query: 402 FELDELLRASAYVLGKSGLGIVYKVVLGN-GIPVAVRRLGEGGEQRHREFVTEVQAIAKV 460
+E++ + LG G VY+ V + VAV+ L E + EF+ E + ++
Sbjct: 212 WEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEI 270
Query: 461 KHPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARG 520
KHPN+V+L +I++F++ GNL + LR N Q ++ L +A +
Sbjct: 271 KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV---VLLYMATQISSA 327
Query: 521 LAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALP 580
+ YL + + F+H ++ N L+ + ++DFGLSRL +TG+ ++ G P
Sbjct: 328 MEYLEK---KNFIHRNLAARNCLVGENHLVKVADFGLSRL--MTGDTYTAHA---GAKFP 379
Query: 581 YMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTSIEV 639
+ APE+ + N+ K DV++FGV+L E+ T G SP I++
Sbjct: 380 I----------KWTAPES-LAYNKFSIKSDVWAFGVLLWEIATYGMSP------YPGIDL 422
Query: 640 PDLVRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVS 699
+ ++K + E P E +K V+ L AC + +P RP +
Sbjct: 423 SQVYELLEKDYRMERP-----------EGCPEK----VYELMRACWQWNPSDRPSFAEIH 467
Query: 700 ENLERI 705
+ E +
Sbjct: 468 QAFETM 473
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 106/214 (49%), Gaps = 25/214 (11%)
Query: 415 LGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWA 474
LG+ G V+ VA++ L + G F+ E Q + K++H +V+L A +
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 72
Query: 475 PDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVH 534
+ ++++++S G+L + L+G G+ L + +A A G+AY+ + +VH
Sbjct: 73 EEPIYIVTEYMSKGSLLDFLKGEMGK---YLRLPQLVDMAAQIASGMAYVERMN---YVH 126
Query: 535 GDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYR 594
D++ +NIL+ + ++DFGL+RLI F P++ +
Sbjct: 127 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF---------PIK------WT 171
Query: 595 APEARVPGNRPMQKWDVYSFGVVLLELLT-GKSP 627
APEA + G R K DV+SFG++L EL T G+ P
Sbjct: 172 APEAALYG-RFTIKSDVWSFGILLTELTTKGRVP 204
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 106/214 (49%), Gaps = 25/214 (11%)
Query: 415 LGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWA 474
LG+ G V+ VA++ L + G F+ E Q + K++H +V+L A +
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 74
Query: 475 PDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVH 534
+ ++++++S G+L + L+G G+ L + +A A G+AY+ + +VH
Sbjct: 75 EEPIYIVTEYMSKGSLLDFLKGEMGK---YLRLPQLVDMAAQIASGMAYVERMN---YVH 128
Query: 535 GDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYR 594
D++ +NIL+ + ++DFGL+RLI F P++ +
Sbjct: 129 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF---------PIK------WT 173
Query: 595 APEARVPGNRPMQKWDVYSFGVVLLELLT-GKSP 627
APEA + G R K DV+SFG++L EL T G+ P
Sbjct: 174 APEAALYG-RFTIKSDVWSFGILLTELTTKGRVP 206
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 106/214 (49%), Gaps = 25/214 (11%)
Query: 415 LGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWA 474
LG+ G V+ VA++ L + G F+ E Q + K++H +V+L A +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 83
Query: 475 PDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVH 534
+ ++++++S G+L + L+G G+ L + +A A G+AY+ + +VH
Sbjct: 84 EEPIYIVTEYMSKGSLLDFLKGEMGK---YLRLPQLVDMAAQIASGMAYVERMN---YVH 137
Query: 535 GDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYR 594
D++ +NIL+ + ++DFGL+RLI F P++ +
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF---------PIK------WT 182
Query: 595 APEARVPGNRPMQKWDVYSFGVVLLELLT-GKSP 627
APEA + G R K DV+SFG++L EL T G+ P
Sbjct: 183 APEAALYG-RFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 105/214 (49%), Gaps = 25/214 (11%)
Query: 415 LGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWA 474
LG+ G V+ VA++ L + G F+ E Q + K++H +V+L A +
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIKTL-KPGNMSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 250
Query: 475 PDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVH 534
+ ++++++S G+L + L+G G+ L + +A A G+AY+ + +VH
Sbjct: 251 EEPIYIVTEYMSKGSLLDFLKGEMGK---YLRLPQLVDMAAQIASGMAYVERMN---YVH 304
Query: 535 GDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYR 594
D++ +NIL+ + ++DFGL RLI F P++ +
Sbjct: 305 RDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKF---------PIK------WT 349
Query: 595 APEARVPGNRPMQKWDVYSFGVVLLELLT-GKSP 627
APEA + G R K DV+SFG++L EL T G+ P
Sbjct: 350 APEAALYG-RFTIKSDVWSFGILLTELTTKGRVP 382
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 127/304 (41%), Gaps = 53/304 (17%)
Query: 406 ELLRASAYVLGKSGLGIVYKVVLGNG---IPVAVRRLGEGGEQRHREFVTEVQAIAKVKH 462
EL R +L + G G V LG VAV+ + EG EF E Q + K+ H
Sbjct: 4 ELKREEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGS-MSEDEFFQEAQTMMKLSH 62
Query: 463 PNIVKLRAYYWAPDEKLLISDFISNGNLANALR--GRNGQPSTSLSWSTRLRIAKGTARG 520
P +VK +++++ISNG L N LR G+ +PS L + G
Sbjct: 63 PKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQ------LLEMCYDVCEG 116
Query: 521 LAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALP 580
+A+L +F+H D+ N L+D D +SDFG++R + + SS G
Sbjct: 117 MAFL---ESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYV-LDDQYVSSVG-------- 164
Query: 581 YMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTSIEV 639
T+ + APE + K DV++FG+++ E+ + GK P T S
Sbjct: 165 ------TKFPVKWSAPEV-FHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNS----- 212
Query: 640 PDLVRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVS 699
++V V +G P H + I + + +C PE RP + +
Sbjct: 213 -EVVLKVSQGHRLYRP-------------HLASDTI--YQIMYSCWHELPEKRPTFQQLL 256
Query: 700 ENLE 703
++E
Sbjct: 257 SSIE 260
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 117/242 (48%), Gaps = 31/242 (12%)
Query: 415 LGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWA 474
LG G V+ VAV+ L +G F+ E + +++H +V+L A
Sbjct: 23 LGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVV-T 80
Query: 475 PDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVH 534
+ +I++++ NG+L + L+ +G L+ + L +A A G+A++ E R ++H
Sbjct: 81 QEPIYIITEYMENGSLVDFLKTPSG---IKLTINKLLDMAAQIAEGMAFIEE---RNYIH 134
Query: 535 GDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYR 594
D++ +NIL+ + I+DFGL+RLI F P++ +
Sbjct: 135 RDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKF---------PIK------WT 179
Query: 595 APEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTSIEVPDLVRWVKKGFEEE 653
APEA G ++ DV+SFG++L E++T G+ P T P++++ +++G+
Sbjct: 180 APEAINYGTFTIKS-DVWSFGILLTEIVTHGRIPYPGMTN------PEVIQNLERGYRMV 232
Query: 654 NP 655
P
Sbjct: 233 RP 234
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 117/242 (48%), Gaps = 31/242 (12%)
Query: 415 LGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWA 474
LG G V+ VAV+ L +G F+ E + +++H +V+L A
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVV-T 78
Query: 475 PDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVH 534
+ +I++++ NG+L + L+ +G L+ + L +A A G+A++ E R ++H
Sbjct: 79 QEPIYIITEYMENGSLVDFLKTPSG---IKLTINKLLDMAAQIAEGMAFIEE---RNYIH 132
Query: 535 GDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYR 594
D++ +NIL+ + I+DFGL+RLI F P++ +
Sbjct: 133 RDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKF---------PIK------WT 177
Query: 595 APEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTSIEVPDLVRWVKKGFEEE 653
APEA G ++ DV+SFG++L E++T G+ P T P++++ +++G+
Sbjct: 178 APEAINYGTFTIKS-DVWSFGILLTEIVTHGRIPYPGMTN------PEVIQNLERGYRMV 230
Query: 654 NP 655
P
Sbjct: 231 RP 232
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 117/242 (48%), Gaps = 31/242 (12%)
Query: 415 LGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWA 474
LG G V+ VAV+ L +G F+ E + +++H +V+L A
Sbjct: 22 LGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVV-T 79
Query: 475 PDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVH 534
+ +I++++ NG+L + L+ +G L+ + L +A A G+A++ E R ++H
Sbjct: 80 QEPIYIITEYMENGSLVDFLKTPSG---IKLTINKLLDMAAQIAEGMAFIEE---RNYIH 133
Query: 535 GDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYR 594
D++ +NIL+ + I+DFGL+RLI F P++ +
Sbjct: 134 RDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKF---------PIK------WT 178
Query: 595 APEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTSIEVPDLVRWVKKGFEEE 653
APEA G ++ DV+SFG++L E++T G+ P T P++++ +++G+
Sbjct: 179 APEAINYGTFTIKS-DVWSFGILLTEIVTHGRIPYPGMTN------PEVIQNLERGYRMV 231
Query: 654 NP 655
P
Sbjct: 232 RP 233
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 136/318 (42%), Gaps = 65/318 (20%)
Query: 414 VLGKS-GLGIVYKVVLGNGI-----------PVAVRRL-GEGGEQRHREFVTEVQAIAKV 460
VLGK G G +VVL I VAV+ L + E+ + ++E++ + +
Sbjct: 31 VLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMI 90
Query: 461 -KHPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGR-----------NGQPSTSLSWS 508
KH NI+ L +I ++ S GNL L+ R + P LS
Sbjct: 91 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSK 150
Query: 509 TRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNP 568
+ A ARG+ YL + +K +H D+ N+L+ D I+DFGL+R I+
Sbjct: 151 DLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXK 207
Query: 569 SSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKSP 627
++ G + PV+ + APEA Q DV+SFGV+L E+ T G SP
Sbjct: 208 KTTNGRL--------PVK------WMAPEALFDRIYTHQS-DVWSFGVLLWEIFTLGGSP 252
Query: 628 ELSPTTSTSIEVPDLVRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEA 687
+ V +L + +K+G + P S+ + + + + C A
Sbjct: 253 ------YPGVPVEELFKLLKEGHRMDKP-SNCTNEL--------------YMMMRDCWHA 291
Query: 688 DPEVRPRMKNVSENLERI 705
P RP K + E+L+RI
Sbjct: 292 VPSQRPTFKQLVEDLDRI 309
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 105/214 (49%), Gaps = 25/214 (11%)
Query: 415 LGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWA 474
LG+ G V+ VA++ L + G F+ E Q + K++H +V+L A +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 83
Query: 475 PDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVH 534
+ ++ +++S G+L + L+G G+ L + +A A G+AY+ + +VH
Sbjct: 84 EEPIYIVCEYMSKGSLLDFLKGEMGK---YLRLPQLVDMAAQIASGMAYVERMN---YVH 137
Query: 535 GDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYR 594
D++ +NIL+ + ++DFGL+RLI F P++ +
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF---------PIK------WT 182
Query: 595 APEARVPGNRPMQKWDVYSFGVVLLELLT-GKSP 627
APEA + G R K DV+SFG++L EL T G+ P
Sbjct: 183 APEAALYG-RFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 131/294 (44%), Gaps = 46/294 (15%)
Query: 415 LGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWA 474
LG G V+ VAV+ L +G F+ E + +++H +V+L A
Sbjct: 30 LGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVV-T 87
Query: 475 PDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVH 534
+ +I++++ NG+L + L+ +G L+ + L +A A G+A++ E R ++H
Sbjct: 88 QEPIYIITEYMENGSLVDFLKTPSG---IKLTINKLLDMAAQIAEGMAFIEE---RNYIH 141
Query: 535 GDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYR 594
D++ +NIL+ + I+DFGL+RLI F P++ +
Sbjct: 142 RDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKF---------PIK------WT 186
Query: 595 APEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTSIEVPDLVRWVKKGFEEE 653
APEA G ++ DV+SFG++L E++T G+ P T P++++ +++G+
Sbjct: 187 APEAINYGTFTIKS-DVWSFGILLTEIVTHGRIPYPGMTN------PEVIQNLERGYRMV 239
Query: 654 NPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERIGT 707
P D L Q L C + PE RP + LE T
Sbjct: 240 RP--DNCPEELYQ-------------LMRLCWKERPEDRPTFDYLRSVLEDFFT 278
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 131/294 (44%), Gaps = 46/294 (15%)
Query: 415 LGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWA 474
LG G V+ VAV+ L +G F+ E + +++H +V+L A
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVV-T 78
Query: 475 PDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVH 534
+ +I++++ NG+L + L+ +G L+ + L +A A G+A++ E R ++H
Sbjct: 79 QEPIYIITEYMENGSLVDFLKTPSG---IKLTINKLLDMAAQIAEGMAFIEE---RNYIH 132
Query: 535 GDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYR 594
D++ +NIL+ + I+DFGL+RLI F P++ +
Sbjct: 133 RDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKF---------PIK------WT 177
Query: 595 APEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTSIEVPDLVRWVKKGFEEE 653
APEA G ++ DV+SFG++L E++T G+ P T P++++ +++G+
Sbjct: 178 APEAINYGTFTIKS-DVWSFGILLTEIVTHGRIPYPGMTN------PEVIQNLERGYRMV 230
Query: 654 NPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERIGT 707
P D L Q L C + PE RP + LE T
Sbjct: 231 RP--DNCPEELYQ-------------LMRLCWKERPEDRPTFDYLRSVLEDFFT 269
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 131/294 (44%), Gaps = 46/294 (15%)
Query: 415 LGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWA 474
LG G V+ VAV+ L +G F+ E + +++H +V+L A
Sbjct: 29 LGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVV-T 86
Query: 475 PDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVH 534
+ +I++++ NG+L + L+ +G L+ + L +A A G+A++ E R ++H
Sbjct: 87 QEPIYIITEYMENGSLVDFLKTPSG---IKLTINKLLDMAAQIAEGMAFIEE---RNYIH 140
Query: 535 GDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYR 594
D++ +NIL+ + I+DFGL+RLI F P++ +
Sbjct: 141 RDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKF---------PIK------WT 185
Query: 595 APEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTSIEVPDLVRWVKKGFEEE 653
APEA G ++ DV+SFG++L E++T G+ P T P++++ +++G+
Sbjct: 186 APEAINYGTFTIKS-DVWSFGILLTEIVTHGRIPYPGMTN------PEVIQNLERGYRMV 238
Query: 654 NPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERIGT 707
P D L Q L C + PE RP + LE T
Sbjct: 239 RP--DNCPEELYQ-------------LMRLCWKERPEDRPTFDYLRSVLEDFFT 277
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 131/294 (44%), Gaps = 46/294 (15%)
Query: 415 LGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWA 474
LG G V+ VAV+ L +G F+ E + +++H +V+L A
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVV-T 84
Query: 475 PDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVH 534
+ +I++++ NG+L + L+ +G L+ + L +A A G+A++ E R ++H
Sbjct: 85 QEPIYIITEYMENGSLVDFLKTPSG---IKLTINKLLDMAAQIAEGMAFIEE---RNYIH 138
Query: 535 GDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYR 594
D++ +NIL+ + I+DFGL+RLI F P++ +
Sbjct: 139 RDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKF---------PIK------WT 183
Query: 595 APEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTSIEVPDLVRWVKKGFEEE 653
APEA G ++ DV+SFG++L E++T G+ P T P++++ +++G+
Sbjct: 184 APEAINYGTFTIKS-DVWSFGILLTEIVTHGRIPYPGMTN------PEVIQNLERGYRMV 236
Query: 654 NPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERIGT 707
P D L Q L C + PE RP + LE T
Sbjct: 237 RP--DNCPEELYQ-------------LMRLCWKERPEDRPTFDYLRSVLEDFFT 275
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 126/291 (43%), Gaps = 53/291 (18%)
Query: 431 GIPVAVRRLGEGGEQRH-REFVTEVQAIAKV-KHPNIVKLRAYYWAPDEKLLISDFISNG 488
+ VAV+ L + ++ + V+E++ + + KH NI+ L +I ++ S G
Sbjct: 67 AVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKG 126
Query: 489 NLANALRGR-----------NGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDI 537
NL LR R N P +++ + ARG+ YL + +K +H D+
Sbjct: 127 NLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDL 183
Query: 538 KPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPE 597
N+L+ + I+DFGL+R IN ++ G + PV+ + APE
Sbjct: 184 AARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRL--------PVK------WMAPE 229
Query: 598 ARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTSIEVPDLVRWVKKGFEEENPL 656
A Q DV+SFGV++ E+ T G SP I V +L + +K+G + P
Sbjct: 230 ALFDRVYTHQS-DVWSFGVLMWEIFTLGGSP------YPGIPVEELFKLLKEGHRMDKP- 281
Query: 657 SDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERIGT 707
+ E ++ + C A P RP K + E+L+RI T
Sbjct: 282 -----------ANCTNE---LYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 318
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 117/242 (48%), Gaps = 31/242 (12%)
Query: 415 LGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWA 474
LG G V+ VAV+ L +G F+ E + +++H +V+L A
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVV-T 78
Query: 475 PDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVH 534
+ +I++++ NG+L + L+ +G L+ + L +A A G+A++ E R ++H
Sbjct: 79 QEPIYIITEYMENGSLVDFLKTPSG---IKLTINKLLDMAAQIAEGMAFIEE---RNYIH 132
Query: 535 GDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYR 594
D++ +NIL+ + I+DFGL+RLI F P++ +
Sbjct: 133 RDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKF---------PIK------WT 177
Query: 595 APEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTSIEVPDLVRWVKKGFEEE 653
APEA G ++ DV+SFG++L E++T G+ P T P++++ +++G+
Sbjct: 178 APEAINYGTFTIKS-DVWSFGILLTEIVTHGRIPYPGMTN------PEVIQNLERGYRMV 230
Query: 654 NP 655
P
Sbjct: 231 RP 232
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 117/242 (48%), Gaps = 31/242 (12%)
Query: 415 LGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWA 474
LG G V+ VAV+ L +G F+ E + +++H +V+L A
Sbjct: 16 LGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVV-T 73
Query: 475 PDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVH 534
+ +I++++ NG+L + L+ +G L+ + L +A A G+A++ E R ++H
Sbjct: 74 QEPIYIITEYMENGSLVDFLKTPSG---IKLTINKLLDMAAQIAEGMAFIEE---RNYIH 127
Query: 535 GDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYR 594
D++ +NIL+ + I+DFGL+RLI F P++ +
Sbjct: 128 RDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKF---------PIK------WT 172
Query: 595 APEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTSIEVPDLVRWVKKGFEEE 653
APEA G ++ DV+SFG++L E++T G+ P T P++++ +++G+
Sbjct: 173 APEAINYGTFTIKS-DVWSFGILLTEIVTHGRIPYPGMTN------PEVIQNLERGYRMV 225
Query: 654 NP 655
P
Sbjct: 226 RP 227
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 105/214 (49%), Gaps = 25/214 (11%)
Query: 415 LGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWA 474
LG+ G V+ VA++ L + G F+ E Q + K++H +V+L A +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 83
Query: 475 PDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVH 534
+ ++++++S G L + L+G G+ L + +A A G+AY+ + +VH
Sbjct: 84 EEPIYIVTEYMSKGCLLDFLKGEMGK---YLRLPQLVDMAAQIASGMAYVERMN---YVH 137
Query: 535 GDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYR 594
D++ +NIL+ + ++DFGL+RLI F P++ +
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF---------PIK------WT 182
Query: 595 APEARVPGNRPMQKWDVYSFGVVLLELLT-GKSP 627
APEA + G R K DV+SFG++L EL T G+ P
Sbjct: 183 APEAALYG-RFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 126/291 (43%), Gaps = 53/291 (18%)
Query: 431 GIPVAVRRLGEGGEQRH-REFVTEVQAIAKV-KHPNIVKLRAYYWAPDEKLLISDFISNG 488
+ VAV+ L + ++ + V+E++ + + KH NI+ L +I ++ S G
Sbjct: 67 AVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKG 126
Query: 489 NLANALRGR-----------NGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDI 537
NL LR R N P +++ + ARG+ YL + +K +H D+
Sbjct: 127 NLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDL 183
Query: 538 KPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPE 597
N+L+ + I+DFGL+R IN ++ G + PV+ + APE
Sbjct: 184 AARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRL--------PVK------WMAPE 229
Query: 598 ARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTSIEVPDLVRWVKKGFEEENPL 656
A Q DV+SFGV++ E+ T G SP I V +L + +K+G + P
Sbjct: 230 ALFDRVYTHQS-DVWSFGVLMWEIFTLGGSP------YPGIPVEELFKLLKEGHRMDKP- 281
Query: 657 SDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERIGT 707
+ E ++ + C A P RP K + E+L+RI T
Sbjct: 282 -----------ANCTNE---LYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 318
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 126/291 (43%), Gaps = 53/291 (18%)
Query: 431 GIPVAVRRLGEGGEQRH-REFVTEVQAIAKV-KHPNIVKLRAYYWAPDEKLLISDFISNG 488
+ VAV+ L + ++ + V+E++ + + KH NI+ L +I ++ S G
Sbjct: 56 AVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKG 115
Query: 489 NLANALRGR-----------NGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDI 537
NL LR R N P +++ + ARG+ YL + +K +H D+
Sbjct: 116 NLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDL 172
Query: 538 KPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPE 597
N+L+ + I+DFGL+R IN ++ G + PV+ + APE
Sbjct: 173 AARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRL--------PVK------WMAPE 218
Query: 598 ARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTSIEVPDLVRWVKKGFEEENPL 656
A Q DV+SFGV++ E+ T G SP I V +L + +K+G + P
Sbjct: 219 ALFDRVYTHQS-DVWSFGVLMWEIFTLGGSP------YPGIPVEELFKLLKEGHRMDKP- 270
Query: 657 SDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERIGT 707
+ E ++ + C A P RP K + E+L+RI T
Sbjct: 271 -----------ANCTNE---LYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 307
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 98/217 (45%), Gaps = 28/217 (12%)
Query: 415 LGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWA 474
+G G VYK + V + + Q+ + F EV + K +H NI+ Y A
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA 75
Query: 475 PDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVH 534
P + +++ + +L + L T + IA+ TA+G+ YLH + +H
Sbjct: 76 P-QLAIVTQWCEGSSLYHHLH----IIETKFEMIKLIDIARQTAQGMDYLH---AKSIIH 127
Query: 535 GDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGF--MGGALPYMKP--VQTEKT 590
D+K +NI L D I DFGL+ + + S S F + G++ +M P ++ +
Sbjct: 128 RDLKSNNIFLHEDLTVKIGDFGLATV----KSRWSGSHQFEQLSGSILWMAPEVIRMQDK 183
Query: 591 NNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
N Y DVY+FG+VL EL+TG+ P
Sbjct: 184 NPYSFQS------------DVYAFGIVLYELMTGQLP 208
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 117/242 (48%), Gaps = 31/242 (12%)
Query: 415 LGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWA 474
LG G V+ VAV+ L +G F+ E + +++H +V+L A
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVV-T 84
Query: 475 PDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVH 534
+ +I++++ NG+L + L+ +G L+ + L +A A G+A++ E R ++H
Sbjct: 85 QEPIYIITEYMENGSLVDFLKTPSG---IKLTINKLLDMAAQIAEGMAFIEE---RNYIH 138
Query: 535 GDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYR 594
D++ +NIL+ + I+DFGL+RLI F P++ +
Sbjct: 139 RDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKF---------PIK------WT 183
Query: 595 APEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTSIEVPDLVRWVKKGFEEE 653
APEA G ++ DV+SFG++L E++T G+ P T P++++ +++G+
Sbjct: 184 APEAINYGTFTIKS-DVWSFGILLTEIVTHGRIPYPGMTN------PEVIQNLERGYRMV 236
Query: 654 NP 655
P
Sbjct: 237 RP 238
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 136/318 (42%), Gaps = 65/318 (20%)
Query: 414 VLGKS-GLGIVYKVVLGNGI-----------PVAVRRL-GEGGEQRHREFVTEVQAIAKV 460
VLGK G G +VVL I VAV+ L + E+ + ++E++ + +
Sbjct: 16 VLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMI 75
Query: 461 -KHPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGR-----------NGQPSTSLSWS 508
KH NI+ L +I ++ S GNL L+ R + P LS
Sbjct: 76 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSK 135
Query: 509 TRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNP 568
+ A ARG+ YL + +K +H D+ N+L+ D I+DFGL+R I+
Sbjct: 136 DLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 192
Query: 569 SSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKSP 627
++ G + PV+ + APEA Q DV+SFGV+L E+ T G SP
Sbjct: 193 KTTNGRL--------PVK------WMAPEALFDRIYTHQS-DVWSFGVLLWEIFTLGGSP 237
Query: 628 ELSPTTSTSIEVPDLVRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEA 687
+ V +L + +K+G + P S+ + + + + C A
Sbjct: 238 ------YPGVPVEELFKLLKEGHRMDKP-SNCTNEL--------------YMMMRDCWHA 276
Query: 688 DPEVRPRMKNVSENLERI 705
P RP K + E+L+RI
Sbjct: 277 VPSQRPTFKQLVEDLDRI 294
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 117/242 (48%), Gaps = 31/242 (12%)
Query: 415 LGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWA 474
LG G V+ VAV+ L +G F+ E + +++H +V+L A
Sbjct: 26 LGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVV-T 83
Query: 475 PDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVH 534
+ +I++++ NG+L + L+ +G L+ + L +A A G+A++ E R ++H
Sbjct: 84 QEPIYIITEYMENGSLVDFLKTPSG---IKLTINKLLDMAAQIAEGMAFIEE---RNYIH 137
Query: 535 GDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYR 594
D++ +NIL+ + I+DFGL+RLI F P++ +
Sbjct: 138 RDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKF---------PIK------WT 182
Query: 595 APEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTSIEVPDLVRWVKKGFEEE 653
APEA G ++ DV+SFG++L E++T G+ P T P++++ +++G+
Sbjct: 183 APEAINYGTFTIKS-DVWSFGILLTEIVTHGRIPYPGMTN------PEVIQNLERGYRMV 235
Query: 654 NP 655
P
Sbjct: 236 RP 237
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 126/291 (43%), Gaps = 53/291 (18%)
Query: 431 GIPVAVRRLGEGGEQRH-REFVTEVQAIAKV-KHPNIVKLRAYYWAPDEKLLISDFISNG 488
+ VAV+ L + ++ + V+E++ + + KH NI+ L +I ++ S G
Sbjct: 59 AVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKG 118
Query: 489 NLANALRGR-----------NGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDI 537
NL LR R N P +++ + ARG+ YL + +K +H D+
Sbjct: 119 NLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDL 175
Query: 538 KPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPE 597
N+L+ + I+DFGL+R IN ++ G + PV+ + APE
Sbjct: 176 AARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRL--------PVK------WMAPE 221
Query: 598 ARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTSIEVPDLVRWVKKGFEEENPL 656
A Q DV+SFGV++ E+ T G SP I V +L + +K+G + P
Sbjct: 222 ALFDRVYTHQS-DVWSFGVLMWEIFTLGGSP------YPGIPVEELFKLLKEGHRMDKP- 273
Query: 657 SDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERIGT 707
+ E ++ + C A P RP K + E+L+RI T
Sbjct: 274 -----------ANCTNE---LYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 310
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 131/294 (44%), Gaps = 46/294 (15%)
Query: 415 LGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWA 474
LG G V+ VAV+ L +G F+ E + +++H +V+L A
Sbjct: 31 LGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVV-T 88
Query: 475 PDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVH 534
+ +I++++ NG+L + L+ +G L+ + L +A A G+A++ E R ++H
Sbjct: 89 QEPIYIITEYMENGSLVDFLKTPSG---IKLTINKLLDMAAQIAEGMAFIEE---RNYIH 142
Query: 535 GDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYR 594
D++ +NIL+ + I+DFGL+RLI F P++ +
Sbjct: 143 RDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKF---------PIK------WT 187
Query: 595 APEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTSIEVPDLVRWVKKGFEEE 653
APEA G ++ DV+SFG++L E++T G+ P T P++++ +++G+
Sbjct: 188 APEAINYGTFTIKS-DVWSFGILLTEIVTHGRIPYPGMTN------PEVIQNLERGYRMV 240
Query: 654 NPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERIGT 707
P D L Q L C + PE RP + LE T
Sbjct: 241 RP--DNCPEELYQ-------------LMRLCWKERPEDRPTFDYLRSVLEDFFT 279
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 136/318 (42%), Gaps = 65/318 (20%)
Query: 414 VLGKS-GLGIVYKVVLGNGI-----------PVAVRRL-GEGGEQRHREFVTEVQAIAKV 460
VLGK G G +VVL I VAV+ L + E+ + ++E++ + +
Sbjct: 31 VLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMI 90
Query: 461 -KHPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGR-----------NGQPSTSLSWS 508
KH NI+ L +I ++ S GNL L+ R + P LS
Sbjct: 91 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSK 150
Query: 509 TRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNP 568
+ A ARG+ YL + +K +H D+ N+L+ D I+DFGL+R I+
Sbjct: 151 DLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 207
Query: 569 SSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKSP 627
++ G + PV+ + APEA Q DV+SFGV+L E+ T G SP
Sbjct: 208 KTTNGRL--------PVK------WMAPEALFDRIYTHQS-DVWSFGVLLWEIFTLGGSP 252
Query: 628 ELSPTTSTSIEVPDLVRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEA 687
+ V +L + +K+G + P S+ + + + + C A
Sbjct: 253 ------YPGVPVEELFKLLKEGHRMDKP-SNCTNEL--------------YMMMRDCWHA 291
Query: 688 DPEVRPRMKNVSENLERI 705
P RP K + E+L+RI
Sbjct: 292 VPSQRPTFKQLVEDLDRI 309
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 126/291 (43%), Gaps = 53/291 (18%)
Query: 431 GIPVAVRRLGEGGEQRH-REFVTEVQAIAKV-KHPNIVKLRAYYWAPDEKLLISDFISNG 488
+ VAV+ L + ++ + V+E++ + + KH NI+ L +I ++ S G
Sbjct: 54 AVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKG 113
Query: 489 NLANALRGR-----------NGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDI 537
NL LR R N P +++ + ARG+ YL + +K +H D+
Sbjct: 114 NLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDL 170
Query: 538 KPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPE 597
N+L+ + I+DFGL+R IN ++ G + PV+ + APE
Sbjct: 171 TARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRL--------PVK------WMAPE 216
Query: 598 ARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTSIEVPDLVRWVKKGFEEENPL 656
A Q DV+SFGV++ E+ T G SP I V +L + +K+G + P
Sbjct: 217 ALFDRVYTHQS-DVWSFGVLMWEIFTLGGSP------YPGIPVEELFKLLKEGHRMDKP- 268
Query: 657 SDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERIGT 707
+ E ++ + C A P RP K + E+L+RI T
Sbjct: 269 -----------ANCTNE---LYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 305
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 136/318 (42%), Gaps = 65/318 (20%)
Query: 414 VLGKS-GLGIVYKVVLGNGI-----------PVAVRRL-GEGGEQRHREFVTEVQAIAKV 460
VLGK G G +VVL I VAV+ L + E+ + ++E++ + +
Sbjct: 31 VLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMI 90
Query: 461 -KHPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGR-----------NGQPSTSLSWS 508
KH NI+ L +I ++ S GNL L+ R + P LS
Sbjct: 91 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSK 150
Query: 509 TRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNP 568
+ A ARG+ YL + +K +H D+ N+L+ D I+DFGL+R I+
Sbjct: 151 DLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 207
Query: 569 SSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKSP 627
++ G + PV+ + APEA Q DV+SFGV+L E+ T G SP
Sbjct: 208 KTTNGRL--------PVK------WMAPEALFDRIYTHQS-DVWSFGVLLWEIFTLGGSP 252
Query: 628 ELSPTTSTSIEVPDLVRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEA 687
+ V +L + +K+G + P S+ + + + + C A
Sbjct: 253 ------YPGVPVEELFKLLKEGHRMDKP-SNCTNEL--------------YMMMRDCWHA 291
Query: 688 DPEVRPRMKNVSENLERI 705
P RP K + E+L+RI
Sbjct: 292 VPSQRPTFKQLVEDLDRI 309
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 105/214 (49%), Gaps = 25/214 (11%)
Query: 415 LGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWA 474
LG+ G V+ VA++ L + G F+ E Q + K++H +V+L A +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 83
Query: 475 PDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVH 534
+ ++++++S G+L + L+G G+ L + +A A G+AY+ + +VH
Sbjct: 84 EEPIYIVTEYMSKGSLLDFLKGEMGK---YLRLPQLVDMAAQIASGMAYVERMN---YVH 137
Query: 535 GDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYR 594
D+ +NIL+ + ++DFGL+RLI F P++ +
Sbjct: 138 RDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF---------PIK------WT 182
Query: 595 APEARVPGNRPMQKWDVYSFGVVLLELLT-GKSP 627
APEA + G R K DV+SFG++L EL T G+ P
Sbjct: 183 APEAALYG-RFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 136/318 (42%), Gaps = 65/318 (20%)
Query: 414 VLGKS-GLGIVYKVVLGNGI-----------PVAVRRL-GEGGEQRHREFVTEVQAIAKV 460
VLGK G G +VVL I VAV+ L + E+ + ++E++ + +
Sbjct: 72 VLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMI 131
Query: 461 -KHPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGR-----------NGQPSTSLSWS 508
KH NI+ L +I ++ S GNL L+ R + P LS
Sbjct: 132 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSK 191
Query: 509 TRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNP 568
+ A ARG+ YL + +K +H D+ N+L+ D I+DFGL+R I+
Sbjct: 192 DLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 248
Query: 569 SSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKSP 627
++ G + PV+ + APEA Q DV+SFGV+L E+ T G SP
Sbjct: 249 KTTNGRL--------PVK------WMAPEALFDRIYTHQS-DVWSFGVLLWEIFTLGGSP 293
Query: 628 ELSPTTSTSIEVPDLVRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEA 687
+ V +L + +K+G + P S+ + + + + C A
Sbjct: 294 ------YPGVPVEELFKLLKEGHRMDKP-SNCTNEL--------------YMMMRDCWHA 332
Query: 688 DPEVRPRMKNVSENLERI 705
P RP K + E+L+RI
Sbjct: 333 VPSQRPTFKQLVEDLDRI 350
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 105/214 (49%), Gaps = 25/214 (11%)
Query: 415 LGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWA 474
LG+ G V+ VA++ L + G F+ E Q + K++H +V+L A +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 83
Query: 475 PDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVH 534
+ ++ +++S G+L + L+G G+ L + +A A G+AY+ + +VH
Sbjct: 84 EEPIYIVIEYMSKGSLLDFLKGEMGK---YLRLPQLVDMAAQIASGMAYVERMN---YVH 137
Query: 535 GDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYR 594
D++ +NIL+ + ++DFGL+RLI F P++ +
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKF---------PIK------WT 182
Query: 595 APEARVPGNRPMQKWDVYSFGVVLLELLT-GKSP 627
APEA + G R K DV+SFG++L EL T G+ P
Sbjct: 183 APEAALYG-RFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 126/291 (43%), Gaps = 53/291 (18%)
Query: 431 GIPVAVRRLGEGG-EQRHREFVTEVQAIAKV-KHPNIVKLRAYYWAPDEKLLISDFISNG 488
+ VAV+ L + E+ + V+E++ + + KH NI+ L +I ++ S G
Sbjct: 67 AVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKG 126
Query: 489 NLANALRGR-----------NGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDI 537
NL LR R N P +++ + ARG+ YL + +K +H D+
Sbjct: 127 NLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDL 183
Query: 538 KPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPE 597
N+L+ + I+DFGL+R IN ++ G + PV+ + APE
Sbjct: 184 AARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRL--------PVK------WMAPE 229
Query: 598 ARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTSIEVPDLVRWVKKGFEEENPL 656
A Q DV+SFGV++ E+ T G SP I V +L + +K+G + P
Sbjct: 230 ALFDRVYTHQS-DVWSFGVLMWEIFTLGGSP------YPGIPVEELFKLLKEGHRMDKP- 281
Query: 657 SDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERIGT 707
+ E ++ + C A P RP K + E+L+RI T
Sbjct: 282 -----------ANCTNE---LYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 318
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 136/318 (42%), Gaps = 65/318 (20%)
Query: 414 VLGKS-GLGIVYKVVLGNGI-----------PVAVRRL-GEGGEQRHREFVTEVQAIAKV 460
VLGK G G +VVL I VAV+ L + E+ + ++E++ + +
Sbjct: 20 VLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMI 79
Query: 461 -KHPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGR-----------NGQPSTSLSWS 508
KH NI+ L +I ++ S GNL L+ R + P LS
Sbjct: 80 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSK 139
Query: 509 TRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNP 568
+ A ARG+ YL + +K +H D+ N+L+ D I+DFGL+R I+
Sbjct: 140 DLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 196
Query: 569 SSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKSP 627
++ G + PV+ + APEA Q DV+SFGV+L E+ T G SP
Sbjct: 197 KTTNGRL--------PVK------WMAPEALFDRIYTHQS-DVWSFGVLLWEIFTLGGSP 241
Query: 628 ELSPTTSTSIEVPDLVRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEA 687
+ V +L + +K+G + P S+ + + + + C A
Sbjct: 242 ------YPGVPVEELFKLLKEGHRMDKP-SNCTNEL--------------YMMMRDCWHA 280
Query: 688 DPEVRPRMKNVSENLERI 705
P RP K + E+L+RI
Sbjct: 281 VPSQRPTFKQLVEDLDRI 298
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 127/291 (43%), Gaps = 53/291 (18%)
Query: 431 GIPVAVRRLGEGGEQRH-REFVTEVQAIAKV-KHPNIVKLRAYYWAPDEKLLISDFISNG 488
+ VAV+ L + ++ + V+E++ + + KH NI+ L +I ++ S G
Sbjct: 67 AVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKG 126
Query: 489 NLANALRGR-----------NGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDI 537
NL LR R N P +++ + ARG+ YL + +K +H D+
Sbjct: 127 NLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDL 183
Query: 538 KPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPE 597
N+L+ + I+DFGL+R IN +++ G + PV+ + APE
Sbjct: 184 AARNVLVTENNVMKIADFGLARDINNIDYYKNTTNGRL--------PVK------WMAPE 229
Query: 598 ARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTSIEVPDLVRWVKKGFEEENPL 656
A Q DV+SFGV++ E+ T G SP I V +L + +K+G + P
Sbjct: 230 ALFDRVYTHQS-DVWSFGVLMWEIFTLGGSP------YPGIPVEELFKLLKEGHRMDKP- 281
Query: 657 SDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERIGT 707
+ E ++ + C A P RP K + E+L+RI T
Sbjct: 282 -----------ANCTNE---LYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 318
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 105/214 (49%), Gaps = 25/214 (11%)
Query: 415 LGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWA 474
LG+ G V+ VA++ L + G F+ E Q + K++H +V+L A +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 83
Query: 475 PDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVH 534
+ ++ +++S G+L + L+G G+ L + +A A G+AY+ + +VH
Sbjct: 84 EEPIYIVIEYMSKGSLLDFLKGEMGK---YLRLPQLVDMAAQIASGMAYVERMN---YVH 137
Query: 535 GDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYR 594
D++ +NIL+ + ++DFGL+RLI F P++ +
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF---------PIK------WT 182
Query: 595 APEARVPGNRPMQKWDVYSFGVVLLELLT-GKSP 627
APEA + G R K DV+SFG++L EL T G+ P
Sbjct: 183 APEAALYG-RFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 136/318 (42%), Gaps = 65/318 (20%)
Query: 414 VLGKS-GLGIVYKVVLGNGI-----------PVAVRRL-GEGGEQRHREFVTEVQAIAKV 460
VLGK G G +VVL I VAV+ L + E+ + ++E++ + +
Sbjct: 23 VLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMI 82
Query: 461 -KHPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGR-----------NGQPSTSLSWS 508
KH NI+ L +I ++ S GNL L+ R + P LS
Sbjct: 83 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSK 142
Query: 509 TRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNP 568
+ A ARG+ YL + +K +H D+ N+L+ D I+DFGL+R I+
Sbjct: 143 DLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 199
Query: 569 SSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKSP 627
++ G + PV+ + APEA Q DV+SFGV+L E+ T G SP
Sbjct: 200 KTTNGRL--------PVK------WMAPEALFDRIYTHQS-DVWSFGVLLWEIFTLGGSP 244
Query: 628 ELSPTTSTSIEVPDLVRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEA 687
+ V +L + +K+G + P S+ + + + + C A
Sbjct: 245 ------YPGVPVEELFKLLKEGHRMDKP-SNCTNEL--------------YMMMRDCWHA 283
Query: 688 DPEVRPRMKNVSENLERI 705
P RP K + E+L+RI
Sbjct: 284 VPSQRPTFKQLVEDLDRI 301
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 135/296 (45%), Gaps = 50/296 (16%)
Query: 415 LGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWA 474
LG G V+ VAV+ + + G F+ E + ++H +VKL A
Sbjct: 196 LGAGQFGEVWMATYNKHTKVAVKTM-KPGSMSVEAFLAEANVMKTLQHDKLVKLHAVV-T 253
Query: 475 PDEKLLISDFISNGNLANALRGRNG--QPSTSLSWSTRLRIAKGTARGLAYLHECSPRKF 532
+ +I++F++ G+L + L+ G QP L + + A G+A++ + R +
Sbjct: 254 KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKL-----IDFSAQIAEGMAFIEQ---RNY 305
Query: 533 VHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNN 592
+H D++ +NIL+ I+DFGL+R+I F P++
Sbjct: 306 IHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKF---------PIK------ 350
Query: 593 YRAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTSIEVPDLVRWVKKGFE 651
+ APEA G+ ++ DV+SFG++L+E++T G+ P P S P+++R +++G+
Sbjct: 351 WTAPEAINFGSFTIKS-DVWSFGILLMEIVTYGRIP--YPGMSN----PEVIRALERGYR 403
Query: 652 EENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERIGT 707
P + +E ++++ + C + PE RP + + L+ T
Sbjct: 404 MPRP------------ENCPEE---LYNIMMRCWKNRPEERPTFEYIQSVLDDFYT 444
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 126/291 (43%), Gaps = 53/291 (18%)
Query: 431 GIPVAVRRLGEGGEQRH-REFVTEVQAIAKV-KHPNIVKLRAYYWAPDEKLLISDFISNG 488
+ VAV+ L + ++ + V+E++ + + KH NI+ L +I ++ S G
Sbjct: 67 AVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYASKG 126
Query: 489 NLANALRGR-----------NGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDI 537
NL LR R N P +++ + ARG+ YL + +K +H D+
Sbjct: 127 NLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDL 183
Query: 538 KPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPE 597
N+L+ + I+DFGL+R IN ++ G + PV+ + APE
Sbjct: 184 AARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRL--------PVK------WMAPE 229
Query: 598 ARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTSIEVPDLVRWVKKGFEEENPL 656
A Q DV+SFGV++ E+ T G SP I V +L + +K+G + P
Sbjct: 230 ALFDRVYTHQS-DVWSFGVLMWEIFTLGGSP------YPGIPVEELFKLLKEGHRMDKP- 281
Query: 657 SDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERIGT 707
+ E ++ + C A P RP K + E+L+RI T
Sbjct: 282 -----------ANCTNE---LYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 318
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 126/291 (43%), Gaps = 53/291 (18%)
Query: 431 GIPVAVRRLGEGGEQRH-REFVTEVQAIAKV-KHPNIVKLRAYYWAPDEKLLISDFISNG 488
+ VAV+ L + ++ + V+E++ + + KH NI+ L +I ++ S G
Sbjct: 67 AVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIITLLGACTQDGPLYVIVEYASKG 126
Query: 489 NLANALRGR-----------NGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDI 537
NL LR R N P +++ + ARG+ YL + +K +H D+
Sbjct: 127 NLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDL 183
Query: 538 KPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPE 597
N+L+ + I+DFGL+R IN ++ G + PV+ + APE
Sbjct: 184 AARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRL--------PVK------WMAPE 229
Query: 598 ARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTSIEVPDLVRWVKKGFEEENPL 656
A Q DV+SFGV++ E+ T G SP I V +L + +K+G + P
Sbjct: 230 ALFDRVYTHQS-DVWSFGVLMWEIFTLGGSP------YPGIPVEELFKLLKEGHRMDKP- 281
Query: 657 SDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERIGT 707
+ E ++ + C A P RP K + E+L+RI T
Sbjct: 282 -----------ANCTNE---LYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 318
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 107/238 (44%), Gaps = 38/238 (15%)
Query: 414 VLGKSGLGIVYKVVL----GNGIPVAVR---RLGEGGEQRHREFVTEVQAIAKVKHPNIV 466
V+G+ G VY L G I AV+ R+ + GE +F+TE + HPN++
Sbjct: 36 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS--QFLTEGIIMKDFSHPNVL 93
Query: 467 KLRAYYWAPD-EKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLH 525
L + L++ ++ +G+L N +R P+ L++AKG + YL
Sbjct: 94 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKG----MKYL- 148
Query: 526 ECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPY---- 581
+ +KFVH D+ N +LD F ++DFGL+R ++ S G LP
Sbjct: 149 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR--DMYDKEXXSVHNKTGAKLPVKWMA 204
Query: 582 MKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEV 639
++ +QT+K K DV+SFGV+L EL+T +P + I V
Sbjct: 205 LESLQTQKFTT---------------KSDVWSFGVLLWELMTRGAPPYPDVNTFDITV 247
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 126/291 (43%), Gaps = 53/291 (18%)
Query: 431 GIPVAVRRLGEGGEQRH-REFVTEVQAIAKV-KHPNIVKLRAYYWAPDEKLLISDFISNG 488
+ VAV+ L + ++ + V+E++ + + KH NI+ L +I ++ S G
Sbjct: 67 AVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKG 126
Query: 489 NLANALRGR-----------NGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDI 537
NL LR R N P +++ + ARG+ YL + +K +H D+
Sbjct: 127 NLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDL 183
Query: 538 KPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPE 597
N+L+ + I+DFGL+R IN ++ G + PV+ + APE
Sbjct: 184 AARNVLVTENNVMRIADFGLARDINNIDYYKKTTNGRL--------PVK------WMAPE 229
Query: 598 ARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTSIEVPDLVRWVKKGFEEENPL 656
A Q DV+SFGV++ E+ T G SP I V +L + +K+G + P
Sbjct: 230 ALFDRVYTHQS-DVWSFGVLMWEIFTLGGSP------YPGIPVEELFKLLKEGHRMDKP- 281
Query: 657 SDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERIGT 707
+ E ++ + C A P RP K + E+L+RI T
Sbjct: 282 -----------ANCTNE---LYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 318
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 136/318 (42%), Gaps = 65/318 (20%)
Query: 414 VLGKS-GLGIVYKVVLGNGI-----------PVAVRRL-GEGGEQRHREFVTEVQAIAKV 460
VLGK G G +VVL I VAV+ L + E+ + ++E++ + +
Sbjct: 31 VLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMI 90
Query: 461 -KHPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGR-----------NGQPSTSLSWS 508
KH NI+ L +I ++ S GNL L+ R + P LS
Sbjct: 91 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSK 150
Query: 509 TRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNP 568
+ A ARG+ YL + +K +H D+ N+L+ D I+DFGL+R I+
Sbjct: 151 DLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 207
Query: 569 SSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKSP 627
++ G + PV+ + APEA Q DV+SFGV+L E+ T G SP
Sbjct: 208 KTTNGRL--------PVK------WMAPEALFDRIYTHQS-DVWSFGVLLWEIFTLGGSP 252
Query: 628 ELSPTTSTSIEVPDLVRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEA 687
+ V +L + +K+G + P S+ + + + + C A
Sbjct: 253 ------YPGVPVEELFKLLKEGHRMDKP-SNCTNEL--------------YMMMRDCWHA 291
Query: 688 DPEVRPRMKNVSENLERI 705
P RP K + E+L+RI
Sbjct: 292 VPSQRPTFKQLVEDLDRI 309
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 131/293 (44%), Gaps = 46/293 (15%)
Query: 415 LGKSGLGIVYKVVLGN-GIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYW 473
LG G VY V + VAV+ L E + EF+ E + ++KHPN+V+L
Sbjct: 40 LGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 98
Query: 474 APDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFV 533
++++++ GNL + LR N + T++ L +A + + YL + + F+
Sbjct: 99 LEPPFYIVTEYMPYGNLLDYLRECNREEVTAV---VLLYMATQISSAMEYLEK---KNFI 152
Query: 534 HGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNY 593
H D+ N L+ + ++DFGLSRL +TG+ ++ G P +
Sbjct: 153 HRDLAARNCLVGENHVVKVADFGLSRL--MTGDTYTAHA---GAKFPI----------KW 197
Query: 594 RAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTSIEVPDLVRWVKKGFEE 652
APE+ + N K DV++FGV+L E+ T G SP P S +V DL ++KG+
Sbjct: 198 TAPES-LAYNTFSIKSDVWAFGVLLWEIATYGMSP--YPGIDLS-QVYDL---LEKGYRM 250
Query: 653 ENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERI 705
E P E K V+ L AC + P RP + E +
Sbjct: 251 EQP-----------EGCPPK----VYELMRACWKWSPADRPSFAETHQAFETM 288
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 136/318 (42%), Gaps = 65/318 (20%)
Query: 414 VLGKS-GLGIVYKVVLGNGI-----------PVAVRRL-GEGGEQRHREFVTEVQAIAKV 460
VLGK G G +VVL I VAV+ L + E+ + ++E++ + +
Sbjct: 24 VLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMI 83
Query: 461 -KHPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGR-----------NGQPSTSLSWS 508
KH NI+ L +I ++ S GNL L+ R + P LS
Sbjct: 84 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSK 143
Query: 509 TRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNP 568
+ A ARG+ YL + +K +H D+ N+L+ D I+DFGL+R I+
Sbjct: 144 DLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 200
Query: 569 SSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKSP 627
++ G + PV+ + APEA Q DV+SFGV+L E+ T G SP
Sbjct: 201 KTTNGRL--------PVK------WMAPEALFDRIYTHQS-DVWSFGVLLWEIFTLGGSP 245
Query: 628 ELSPTTSTSIEVPDLVRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEA 687
+ V +L + +K+G + P S+ + + + + C A
Sbjct: 246 ------YPGVPVEELFKLLKEGHRMDKP-SNCTNEL--------------YMMMRDCWHA 284
Query: 688 DPEVRPRMKNVSENLERI 705
P RP K + E+L+RI
Sbjct: 285 VPSQRPTFKQLVEDLDRI 302
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 117/242 (48%), Gaps = 31/242 (12%)
Query: 415 LGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWA 474
LG G V+ VAV+ L +G F+ E + +++H +V+L A
Sbjct: 21 LGAGQAGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVV-T 78
Query: 475 PDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVH 534
+ +I++++ NG+L + L+ +G L+ + L +A A G+A++ E R ++H
Sbjct: 79 QEPIYIITEYMENGSLVDFLKTPSG---IKLTINKLLDMAAQIAEGMAFIEE---RNYIH 132
Query: 535 GDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYR 594
D++ +NIL+ + I+DFGL+RLI F P++ +
Sbjct: 133 RDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKF---------PIK------WT 177
Query: 595 APEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTSIEVPDLVRWVKKGFEEE 653
APEA G ++ DV+SFG++L E++T G+ P T P++++ +++G+
Sbjct: 178 APEAINYGTFTIKS-DVWSFGILLTEIVTHGRIPYPGMTN------PEVIQNLERGYRMV 230
Query: 654 NP 655
P
Sbjct: 231 RP 232
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 106/214 (49%), Gaps = 25/214 (11%)
Query: 415 LGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWA 474
LG+ G V+ VA++ L + G F+ E Q + K++H +V+L A +
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 80
Query: 475 PDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVH 534
+ +++++++ G+L + L+G G+ L + ++ A G+AY+ + +VH
Sbjct: 81 EEPIYIVTEYMNKGSLLDFLKGETGK---YLRLPQLVDMSAQIASGMAYVERMN---YVH 134
Query: 535 GDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYR 594
D++ +NIL+ + ++DFGL+RLI F P++ +
Sbjct: 135 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF---------PIK------WT 179
Query: 595 APEARVPGNRPMQKWDVYSFGVVLLELLT-GKSP 627
APEA + G R K DV+SFG++L EL T G+ P
Sbjct: 180 APEAALYG-RFTIKSDVWSFGILLTELTTKGRVP 212
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 104/214 (48%), Gaps = 25/214 (11%)
Query: 415 LGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWA 474
LG+ G V+ VA++ L + G F+ E Q + K++H +V+L A +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 83
Query: 475 PDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVH 534
+ ++ +++S G L + L+G G+ L + +A A G+AY+ + +VH
Sbjct: 84 EEPIYIVMEYMSKGCLLDFLKGEMGK---YLRLPQLVDMAAQIASGMAYVERMN---YVH 137
Query: 535 GDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYR 594
D++ +NIL+ + ++DFGL+RLI F P++ +
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF---------PIK------WT 182
Query: 595 APEARVPGNRPMQKWDVYSFGVVLLELLT-GKSP 627
APEA + G R K DV+SFG++L EL T G+ P
Sbjct: 183 APEAALYG-RFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 134/292 (45%), Gaps = 50/292 (17%)
Query: 415 LGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWA 474
LG G V+ VAV+ + + G F+ E + ++H +VKL A
Sbjct: 23 LGAGQFGEVWMATYNKHTKVAVKTM-KPGSMSVEAFLAEANVMKTLQHDKLVKLHAVV-T 80
Query: 475 PDEKLLISDFISNGNLANALRGRNG--QPSTSLSWSTRLRIAKGTARGLAYLHECSPRKF 532
+ +I++F++ G+L + L+ G QP L + + A G+A++ + R +
Sbjct: 81 KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKL-----IDFSAQIAEGMAFIEQ---RNY 132
Query: 533 VHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNN 592
+H D++ +NIL+ I+DFGL+R+I F P++
Sbjct: 133 IHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKF---------PIK------ 177
Query: 593 YRAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTSIEVPDLVRWVKKGFE 651
+ APEA G+ ++ DV+SFG++L+E++T G+ P P S P+++R +++G+
Sbjct: 178 WTAPEAINFGSFTIKS-DVWSFGILLMEIVTYGRIP--YPGMSN----PEVIRALERGYR 230
Query: 652 EENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLE 703
P + +E ++++ + C + PE RP + + L+
Sbjct: 231 MPRP------------ENCPEE---LYNIMMRCWKNRPEERPTFEYIQSVLD 267
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 131/310 (42%), Gaps = 57/310 (18%)
Query: 415 LGKSGLGIVYKVVLGNGIP------VAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKL 468
LG+ G V+ N P VAV+ L + ++F E + + ++H +IVK
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKF 82
Query: 469 RAYYWAPDEKLLISDFISNGNLANALRGR--------NGQPSTS---LSWSTRLRIAKGT 517
D +++ +++ +G+L LR +GQP + L S L IA
Sbjct: 83 YGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQI 142
Query: 518 ARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGG 577
A G+ YL + + FVH D+ N L+ + I DFG+SR ++ + GG
Sbjct: 143 ASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSR--DVYSTDYYRVGGHTML 197
Query: 578 ALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTS 636
+ +M P ++ YR + + DV+SFGV+L E+ T GK P + +
Sbjct: 198 PIRWMPP----ESIMYR---------KFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEV 244
Query: 637 IEVPDLVRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMK 696
IE + +G E P KE V+ + L C + +P+ R +K
Sbjct: 245 IEC------ITQGRVLERPRV------------CPKE---VYDVMLGCWQREPQQRLNIK 283
Query: 697 NVSENLERIG 706
+ + L +G
Sbjct: 284 EIYKILHALG 293
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 107/238 (44%), Gaps = 38/238 (15%)
Query: 414 VLGKSGLGIVYKVVL----GNGIPVAVR---RLGEGGEQRHREFVTEVQAIAKVKHPNIV 466
V+G+ G VY L G I AV+ R+ + GE +F+TE + HPN++
Sbjct: 55 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS--QFLTEGIIMKDFSHPNVL 112
Query: 467 KLRAYYWAPD-EKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLH 525
L + L++ ++ +G+L N +R P+ L++AKG + YL
Sbjct: 113 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKG----MKYL- 167
Query: 526 ECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPY---- 581
+ +KFVH D+ N +LD F ++DFGL+R ++ S G LP
Sbjct: 168 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR--DMYDKEYYSVHNKTGAKLPVKWMA 223
Query: 582 MKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEV 639
++ +QT+K K DV+SFGV+L EL+T +P + I V
Sbjct: 224 LESLQTQKFTT---------------KSDVWSFGVLLWELMTRGAPPYPDVNTFDITV 266
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 107/238 (44%), Gaps = 38/238 (15%)
Query: 414 VLGKSGLGIVYKVVL----GNGIPVAVR---RLGEGGEQRHREFVTEVQAIAKVKHPNIV 466
V+G+ G VY L G I AV+ R+ + GE +F+TE + HPN++
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS--QFLTEGIIMKDFSHPNVL 94
Query: 467 KLRAYYWAPD-EKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLH 525
L + L++ ++ +G+L N +R P+ L++AKG + YL
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKG----MKYL- 149
Query: 526 ECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPY---- 581
+ +KFVH D+ N +LD F ++DFGL+R ++ S G LP
Sbjct: 150 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR--DMYDKEYYSVHNKTGAKLPVKWMA 205
Query: 582 MKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEV 639
++ +QT+K K DV+SFGV+L EL+T +P + I V
Sbjct: 206 LESLQTQKFTT---------------KSDVWSFGVLLWELMTRGAPPYPDVNTFDITV 248
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 107/238 (44%), Gaps = 38/238 (15%)
Query: 414 VLGKSGLGIVYKVVL----GNGIPVAVR---RLGEGGEQRHREFVTEVQAIAKVKHPNIV 466
V+G+ G VY L G I AV+ R+ + GE +F+TE + HPN++
Sbjct: 29 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS--QFLTEGIIMKDFSHPNVL 86
Query: 467 KLRAYYWAPD-EKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLH 525
L + L++ ++ +G+L N +R P+ L++AKG + YL
Sbjct: 87 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKG----MKYL- 141
Query: 526 ECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPY---- 581
+ +KFVH D+ N +LD F ++DFGL+R ++ S G LP
Sbjct: 142 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR--DMYDKEYYSVHNKTGAKLPVKWMA 197
Query: 582 MKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEV 639
++ +QT+K K DV+SFGV+L EL+T +P + I V
Sbjct: 198 LESLQTQKFTT---------------KSDVWSFGVLLWELMTRGAPPYPDVNTFDITV 240
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 126/291 (43%), Gaps = 53/291 (18%)
Query: 431 GIPVAVRRLGEGGEQRH-REFVTEVQAIAKV-KHPNIVKLRAYYWAPDEKLLISDFISNG 488
+ VAV+ L + ++ + V+E++ + + KH NI+ L +I ++ S G
Sbjct: 113 AVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKG 172
Query: 489 NLANALRGR-----------NGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDI 537
NL LR R N P +++ + ARG+ YL + +K +H D+
Sbjct: 173 NLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDL 229
Query: 538 KPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPE 597
N+L+ + I+DFGL+R IN ++ G + PV+ + APE
Sbjct: 230 AARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRL--------PVK------WMAPE 275
Query: 598 ARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTSIEVPDLVRWVKKGFEEENPL 656
A Q DV+SFGV++ E+ T G SP I V +L + +K+G + P
Sbjct: 276 ALFDRVYTHQS-DVWSFGVLMWEIFTLGGSP------YPGIPVEELFKLLKEGHRMDKP- 327
Query: 657 SDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERIGT 707
+ E ++ + C A P RP K + E+L+RI T
Sbjct: 328 -----------ANCTNE---LYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 364
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 107/238 (44%), Gaps = 38/238 (15%)
Query: 414 VLGKSGLGIVYKVVL----GNGIPVAVR---RLGEGGEQRHREFVTEVQAIAKVKHPNIV 466
V+G+ G VY L G I AV+ R+ + GE +F+TE + HPN++
Sbjct: 34 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS--QFLTEGIIMKDFSHPNVL 91
Query: 467 KLRAYYWAPD-EKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLH 525
L + L++ ++ +G+L N +R P+ L++AKG + YL
Sbjct: 92 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKG----MKYL- 146
Query: 526 ECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPY---- 581
+ +KFVH D+ N +LD F ++DFGL+R ++ S G LP
Sbjct: 147 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR--DMYDKEYYSVHNKTGAKLPVKWMA 202
Query: 582 MKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEV 639
++ +QT+K K DV+SFGV+L EL+T +P + I V
Sbjct: 203 LESLQTQKFTT---------------KSDVWSFGVLLWELMTRGAPPYPDVNTFDITV 245
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 107/238 (44%), Gaps = 38/238 (15%)
Query: 414 VLGKSGLGIVYKVVL----GNGIPVAVR---RLGEGGEQRHREFVTEVQAIAKVKHPNIV 466
V+G+ G VY L G I AV+ R+ + GE +F+TE + HPN++
Sbjct: 32 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS--QFLTEGIIMKDFSHPNVL 89
Query: 467 KLRAYYWAPD-EKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLH 525
L + L++ ++ +G+L N +R P+ L++AKG + YL
Sbjct: 90 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKG----MKYL- 144
Query: 526 ECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPY---- 581
+ +KFVH D+ N +LD F ++DFGL+R ++ S G LP
Sbjct: 145 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR--DMYDKEYYSVHNKTGAKLPVKWMA 200
Query: 582 MKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEV 639
++ +QT+K K DV+SFGV+L EL+T +P + I V
Sbjct: 201 LESLQTQKFTT---------------KSDVWSFGVLLWELMTRGAPPYPDVNTFDITV 243
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 107/238 (44%), Gaps = 38/238 (15%)
Query: 414 VLGKSGLGIVYKVVL----GNGIPVAVR---RLGEGGEQRHREFVTEVQAIAKVKHPNIV 466
V+G+ G VY L G I AV+ R+ + GE +F+TE + HPN++
Sbjct: 35 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS--QFLTEGIIMKDFSHPNVL 92
Query: 467 KLRAYYWAPD-EKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLH 525
L + L++ ++ +G+L N +R P+ L++AKG + YL
Sbjct: 93 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKG----MKYL- 147
Query: 526 ECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPY---- 581
+ +KFVH D+ N +LD F ++DFGL+R ++ S G LP
Sbjct: 148 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR--DMYDKEYYSVHNKTGAKLPVKWMA 203
Query: 582 MKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEV 639
++ +QT+K K DV+SFGV+L EL+T +P + I V
Sbjct: 204 LESLQTQKFTT---------------KSDVWSFGVLLWELMTRGAPPYPDVNTFDITV 246
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 107/238 (44%), Gaps = 38/238 (15%)
Query: 414 VLGKSGLGIVYKVVL----GNGIPVAVR---RLGEGGEQRHREFVTEVQAIAKVKHPNIV 466
V+G+ G VY L G I AV+ R+ + GE +F+TE + HPN++
Sbjct: 36 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS--QFLTEGIIMKDFSHPNVL 93
Query: 467 KLRAYYWAPD-EKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLH 525
L + L++ ++ +G+L N +R P+ L++AKG + YL
Sbjct: 94 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKG----MKYL- 148
Query: 526 ECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPY---- 581
+ +KFVH D+ N +LD F ++DFGL+R ++ S G LP
Sbjct: 149 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR--DMYDKEYYSVHNKTGAKLPVKWMA 204
Query: 582 MKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEV 639
++ +QT+K K DV+SFGV+L EL+T +P + I V
Sbjct: 205 LESLQTQKFTT---------------KSDVWSFGVLLWELMTRGAPPYPDVNTFDITV 247
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 106/214 (49%), Gaps = 25/214 (11%)
Query: 415 LGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWA 474
LG+ G V+ VA++ L + G F+ E Q + K++H +V+L A +
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 80
Query: 475 PDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVH 534
+ +++++++ G+L + L+G G+ L + ++ A G+AY+ + +VH
Sbjct: 81 EEPIYIVTEYMNKGSLLDFLKGETGK---YLRLPQLVDMSAQIASGMAYVERMN---YVH 134
Query: 535 GDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYR 594
D++ +NIL+ + ++DFGL+RLI F P++ +
Sbjct: 135 RDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKF---------PIK------WT 179
Query: 595 APEARVPGNRPMQKWDVYSFGVVLLELLT-GKSP 627
APEA + G R K DV+SFG++L EL T G+ P
Sbjct: 180 APEAALYG-RFTIKSDVWSFGILLTELTTKGRVP 212
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 107/238 (44%), Gaps = 38/238 (15%)
Query: 414 VLGKSGLGIVYKVVL----GNGIPVAVR---RLGEGGEQRHREFVTEVQAIAKVKHPNIV 466
V+G+ G VY L G I AV+ R+ + GE +F+TE + HPN++
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS--QFLTEGIIMKDFSHPNVL 94
Query: 467 KLRAYYWAPD-EKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLH 525
L + L++ ++ +G+L N +R P+ L++AKG + YL
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKG----MKYL- 149
Query: 526 ECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPY---- 581
+ +KFVH D+ N +LD F ++DFGL+R ++ S G LP
Sbjct: 150 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR--DMYDKEYYSVHNKTGAKLPVKWMA 205
Query: 582 MKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEV 639
++ +QT+K K DV+SFGV+L EL+T +P + I V
Sbjct: 206 LESLQTQKFTT---------------KSDVWSFGVLLWELMTRGAPPYPDVNTFDITV 248
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 107/238 (44%), Gaps = 38/238 (15%)
Query: 414 VLGKSGLGIVYKVVL----GNGIPVAVR---RLGEGGEQRHREFVTEVQAIAKVKHPNIV 466
V+G+ G VY L G I AV+ R+ + GE +F+TE + HPN++
Sbjct: 56 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS--QFLTEGIIMKDFSHPNVL 113
Query: 467 KLRAYYWAPD-EKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLH 525
L + L++ ++ +G+L N +R P+ L++AKG + YL
Sbjct: 114 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKG----MKYL- 168
Query: 526 ECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPY---- 581
+ +KFVH D+ N +LD F ++DFGL+R ++ S G LP
Sbjct: 169 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR--DMYDKEYYSVHNKTGAKLPVKWMA 224
Query: 582 MKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEV 639
++ +QT+K K DV+SFGV+L EL+T +P + I V
Sbjct: 225 LESLQTQKFTT---------------KSDVWSFGVLLWELMTRGAPPYPDVNTFDITV 267
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 125/291 (42%), Gaps = 53/291 (18%)
Query: 431 GIPVAVRRLGEGGEQRH-REFVTEVQAIAKV-KHPNIVKLRAYYWAPDEKLLISDFISNG 488
+ VAV+ L + ++ + V+E++ + + KH NI+ L +I + S G
Sbjct: 67 AVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVGYASKG 126
Query: 489 NLANALRGR-----------NGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDI 537
NL LR R N P +++ + ARG+ YL + +K +H D+
Sbjct: 127 NLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDL 183
Query: 538 KPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPE 597
N+L+ + I+DFGL+R IN ++ G + PV+ + APE
Sbjct: 184 AARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRL--------PVK------WMAPE 229
Query: 598 ARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTSIEVPDLVRWVKKGFEEENPL 656
A Q DV+SFGV++ E+ T G SP I V +L + +K+G + P
Sbjct: 230 ALFDRVYTHQS-DVWSFGVLMWEIFTLGGSP------YPGIPVEELFKLLKEGHRMDKP- 281
Query: 657 SDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERIGT 707
+ E ++ + C A P RP K + E+L+RI T
Sbjct: 282 -----------ANCTNE---LYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 318
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 97/217 (44%), Gaps = 28/217 (12%)
Query: 415 LGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWA 474
+G G VYK + V + + Q+ + F EV + K +H NI+ Y
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 75
Query: 475 PDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVH 534
P + +++ + +L + L T + IA+ TA+G+ YLH + +H
Sbjct: 76 P-QLAIVTQWCEGSSLYHHLH----IIETKFEMIKLIDIARQTAQGMDYLH---AKSIIH 127
Query: 535 GDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGF--MGGALPYMKP--VQTEKT 590
D+K +NI L D I DFGL+ + + S S F + G++ +M P ++ +
Sbjct: 128 RDLKSNNIFLHEDLTVKIGDFGLATV----KSRWSGSHQFEQLSGSILWMAPEVIRMQDK 183
Query: 591 NNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
N Y DVY+FG+VL EL+TG+ P
Sbjct: 184 NPYSFQS------------DVYAFGIVLYELMTGQLP 208
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 97/217 (44%), Gaps = 28/217 (12%)
Query: 415 LGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWA 474
+G G VYK + V + + Q+ + F EV + K +H NI+ Y
Sbjct: 21 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 80
Query: 475 PDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVH 534
P + +++ + +L + L T + IA+ TA+G+ YLH + +H
Sbjct: 81 P-QLAIVTQWCEGSSLYHHLH----IIETKFEMIKLIDIARQTAQGMDYLH---AKSIIH 132
Query: 535 GDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGF--MGGALPYMKP--VQTEKT 590
D+K +NI L D I DFGL+ + + S S F + G++ +M P ++ +
Sbjct: 133 RDLKSNNIFLHEDLTVKIGDFGLATV----KSRWSGSHQFEQLSGSILWMAPEVIRMQDK 188
Query: 591 NNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
N Y DVY+FG+VL EL+TG+ P
Sbjct: 189 NPYSFQS------------DVYAFGIVLYELMTGQLP 213
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 125/291 (42%), Gaps = 53/291 (18%)
Query: 431 GIPVAVRRLGEGGEQRH-REFVTEVQAIAKV-KHPNIVKLRAYYWAPDEKLLISDFISNG 488
+ VAV+ L + ++ + V+E++ + + KH NI+ L +I + S G
Sbjct: 67 AVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVAYASKG 126
Query: 489 NLANALRGR-----------NGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDI 537
NL LR R N P +++ + ARG+ YL + +K +H D+
Sbjct: 127 NLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDL 183
Query: 538 KPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPE 597
N+L+ + I+DFGL+R IN ++ G + PV+ + APE
Sbjct: 184 AARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRL--------PVK------WMAPE 229
Query: 598 ARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTSIEVPDLVRWVKKGFEEENPL 656
A Q DV+SFGV++ E+ T G SP I V +L + +K+G + P
Sbjct: 230 ALFDRVYTHQS-DVWSFGVLMWEIFTLGGSP------YPGIPVEELFKLLKEGHRMDKP- 281
Query: 657 SDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERIGT 707
+ E ++ + C A P RP K + E+L+RI T
Sbjct: 282 -----------ANCTNE---LYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 318
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 97/217 (44%), Gaps = 28/217 (12%)
Query: 415 LGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWA 474
+G G VYK + V + + Q+ + F EV + K +H NI+ Y
Sbjct: 21 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 80
Query: 475 PDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVH 534
P + +++ + +L + L T + IA+ TA+G+ YLH + +H
Sbjct: 81 P-QLAIVTQWCEGSSLYHHLH----IIETKFEMIKLIDIARQTAQGMDYLH---AKSIIH 132
Query: 535 GDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGF--MGGALPYMKP--VQTEKT 590
D+K +NI L D I DFGL+ + + S S F + G++ +M P ++ +
Sbjct: 133 RDLKSNNIFLHEDLTVKIGDFGLATV----KSRWSGSHQFEQLSGSILWMAPEVIRMQDK 188
Query: 591 NNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
N Y DVY+FG+VL EL+TG+ P
Sbjct: 189 NPYSFQS------------DVYAFGIVLYELMTGQLP 213
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 97/217 (44%), Gaps = 28/217 (12%)
Query: 415 LGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWA 474
+G G VYK + V + + Q+ + F EV + K +H NI+ Y
Sbjct: 18 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 77
Query: 475 PDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVH 534
P + +++ + +L + L T + IA+ TA+G+ YLH + +H
Sbjct: 78 P-QLAIVTQWCEGSSLYHHLH----IIETKFEMIKLIDIARQTAQGMDYLH---AKSIIH 129
Query: 535 GDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGF--MGGALPYMKP--VQTEKT 590
D+K +NI L D I DFGL+ + + S S F + G++ +M P ++ +
Sbjct: 130 RDLKSNNIFLHEDLTVKIGDFGLATV----KSRWSGSHQFEQLSGSILWMAPEVIRMQDK 185
Query: 591 NNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
N Y DVY+FG+VL EL+TG+ P
Sbjct: 186 NPYSFQS------------DVYAFGIVLYELMTGQLP 210
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 117/242 (48%), Gaps = 31/242 (12%)
Query: 415 LGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWA 474
LG G V+ VAV+ L +G F+ E + +++H +V+L A
Sbjct: 17 LGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVV-T 74
Query: 475 PDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVH 534
+ +I++++ NG+L + L+ +G L+ + L +A A G+A++ E R ++H
Sbjct: 75 QEPIYIITEYMENGSLVDFLKTPSG---IKLTINKLLDMAAQIAEGMAFIEE---RNYIH 128
Query: 535 GDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYR 594
+++ +NIL+ + I+DFGL+RLI F P++ +
Sbjct: 129 RNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKF---------PIK------WT 173
Query: 595 APEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTSIEVPDLVRWVKKGFEEE 653
APEA G ++ DV+SFG++L E++T G+ P T P++++ +++G+
Sbjct: 174 APEAINYGTFTIKS-DVWSFGILLTEIVTHGRIPYPGMTN------PEVIQNLERGYRMV 226
Query: 654 NP 655
P
Sbjct: 227 RP 228
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 96/217 (44%), Gaps = 28/217 (12%)
Query: 415 LGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWA 474
+G G VYK + V + + Q+ + F EV + K +H NI+ Y
Sbjct: 43 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 102
Query: 475 PDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVH 534
P + +++ + +L + L T + IA+ TA+G+ YLH S +H
Sbjct: 103 P-QLAIVTQWCEGSSLYHHLH----IIETKFEMIKLIDIARQTAQGMDYLHAKS---IIH 154
Query: 535 GDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGF--MGGALPYMKP--VQTEKT 590
D+K +NI L D I DFGL+ + S S F + G++ +M P ++ +
Sbjct: 155 RDLKSNNIFLHEDLTVKIGDFGLA----TVKSRWSGSHQFEQLSGSILWMAPEVIRMQDK 210
Query: 591 NNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
N Y DVY+FG+VL EL+TG+ P
Sbjct: 211 NPYSFQS------------DVYAFGIVLYELMTGQLP 235
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 96/217 (44%), Gaps = 28/217 (12%)
Query: 415 LGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWA 474
+G G VYK + V + + Q+ + F EV + K +H NI+ Y
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 103
Query: 475 PDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVH 534
P + +++ + +L + L T + IA+ TA+G+ YLH S +H
Sbjct: 104 P-QLAIVTQWCEGSSLYHHLH----IIETKFEMIKLIDIARQTAQGMDYLHAKS---IIH 155
Query: 535 GDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGF--MGGALPYMKP--VQTEKT 590
D+K +NI L D I DFGL+ + S S F + G++ +M P ++ +
Sbjct: 156 RDLKSNNIFLHEDLTVKIGDFGLA----TVKSRWSGSHQFEQLSGSILWMAPEVIRMQDK 211
Query: 591 NNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
N Y DVY+FG+VL EL+TG+ P
Sbjct: 212 NPYSFQS------------DVYAFGIVLYELMTGQLP 236
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 122/294 (41%), Gaps = 46/294 (15%)
Query: 415 LGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWA 474
+G G+V+ N VA++ + EG +F+ E + + K+ HP +V+L
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 73
Query: 475 PDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVH 534
L+ +F+ +G L++ LR + G + T L + G+AYL E S +H
Sbjct: 74 QAPICLVFEFMEHGCLSDYLRTQRGLFAA----ETLLGMCLDVCEGMAYLEEAS---VIH 126
Query: 535 GDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYR 594
D+ N L+ + +SDFG++R + + SS+G T+ +
Sbjct: 127 RDLAARNCLVGENQVIKVSDFGMTRFV-LDDQYTSSTG--------------TKFPVKWA 171
Query: 595 APEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTSIEVPDLVRWVKKGFEEE 653
+PE +R K DV+SFGV++ E+ + GK P + + S +E + GF
Sbjct: 172 SPEV-FSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVED------ISTGFRLY 224
Query: 654 NPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERIGT 707
P L H V+ + C + PE RP + L I
Sbjct: 225 KP--------RLASTH-------VYQIMNHCWKERPEDRPAFSRLLRQLAAIAA 263
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 121/293 (41%), Gaps = 46/293 (15%)
Query: 415 LGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWA 474
+G G+V+ N VA++ + EG +F+ E + + K+ HP +V+L
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 74
Query: 475 PDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVH 534
L+++F+ +G L++ LR + G + T L + G+AYL E +H
Sbjct: 75 QAPICLVTEFMEHGCLSDYLRTQRGLFAA----ETLLGMCLDVCEGMAYLEEAC---VIH 127
Query: 535 GDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYR 594
D+ N L+ + +SDFG++R + + SS+G T+ +
Sbjct: 128 RDLAARNCLVGENQVIKVSDFGMTRFV-LDDQYTSSTG--------------TKFPVKWA 172
Query: 595 APEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTSIEVPDLVRWVKKGFEEE 653
+PE +R K DV+SFGV++ E+ + GK P + + S +E + GF
Sbjct: 173 SPEV-FSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVED------ISTGFRLY 225
Query: 654 NPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERIG 706
P L H V+ + C PE RP + L I
Sbjct: 226 KP--------RLASTH-------VYQIMNHCWRERPEDRPAFSRLLRQLAEIA 263
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 96/217 (44%), Gaps = 28/217 (12%)
Query: 415 LGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWA 474
+G G VYK + V + + Q+ + F EV + K +H NI+ Y
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 75
Query: 475 PDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVH 534
P + +++ + +L + L T + IA+ TA+G+ YLH + +H
Sbjct: 76 P-QLAIVTQWCEGSSLYHHLH----IIETKFEMIKLIDIARQTAQGMDYLH---AKSIIH 127
Query: 535 GDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGF--MGGALPYMKP--VQTEKT 590
D+K +NI L D I DFGL+ + S S F + G++ +M P ++ +
Sbjct: 128 RDLKSNNIFLHEDLTVKIGDFGLA----TEKSRWSGSHQFEQLSGSILWMAPEVIRMQDK 183
Query: 591 NNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
N Y DVY+FG+VL EL+TG+ P
Sbjct: 184 NPYSFQS------------DVYAFGIVLYELMTGQLP 208
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 96/217 (44%), Gaps = 28/217 (12%)
Query: 415 LGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWA 474
+G G VYK + V + + Q+ + F EV + K +H NI+ Y
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 103
Query: 475 PDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVH 534
P + +++ + +L + L T + IA+ TA+G+ YLH S +H
Sbjct: 104 P-QLAIVTQWCEGSSLYHHLH----IIETKFEMIKLIDIARQTAQGMDYLHAKS---IIH 155
Query: 535 GDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGF--MGGALPYMKP--VQTEKT 590
D+K +NI L D I DFGL+ + S S F + G++ +M P ++ +
Sbjct: 156 RDLKSNNIFLHEDLTVKIGDFGLA----TEKSRWSGSHQFEQLSGSILWMAPEVIRMQDK 211
Query: 591 NNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
N Y DVY+FG+VL EL+TG+ P
Sbjct: 212 NPYSFQS------------DVYAFGIVLYELMTGQLP 236
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 107/238 (44%), Gaps = 38/238 (15%)
Query: 414 VLGKSGLGIVYKVVL----GNGIPVAVR---RLGEGGEQRHREFVTEVQAIAKVKHPNIV 466
V+G+ G VY L G I AV+ R+ + GE +F+TE + HPN++
Sbjct: 38 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS--QFLTEGIIMKDFSHPNVL 95
Query: 467 KLRAYYWAPD-EKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLH 525
L + L++ ++ +G+L N +R P+ L++AKG + +L
Sbjct: 96 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKG----MKFL- 150
Query: 526 ECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPY---- 581
+ +KFVH D+ N +LD F ++DFGL+R ++ S G LP
Sbjct: 151 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR--DMLDKEFDSVHNKTGAKLPVKWMA 206
Query: 582 MKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEV 639
++ +QT+K K DV+SFGV+L EL+T +P + I V
Sbjct: 207 LESLQTQKFTT---------------KSDVWSFGVLLWELMTRGAPPYPDVNTFDITV 249
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 107/238 (44%), Gaps = 38/238 (15%)
Query: 414 VLGKSGLGIVYKVVL----GNGIPVAVR---RLGEGGEQRHREFVTEVQAIAKVKHPNIV 466
V+G+ G VY L G I AV+ R+ + GE +F+TE + HPN++
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS--QFLTEGIIMKDFSHPNVL 94
Query: 467 KLRAYYWAPD-EKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLH 525
L + L++ ++ +G+L N +R P+ L++AKG + +L
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKG----MKFL- 149
Query: 526 ECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPY---- 581
+ +KFVH D+ N +LD F ++DFGL+R ++ S G LP
Sbjct: 150 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR--DMYDKEFDSVHNKTGAKLPVKWMA 205
Query: 582 MKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEV 639
++ +QT+K K DV+SFGV+L EL+T +P + I V
Sbjct: 206 LESLQTQKFTT---------------KSDVWSFGVLLWELMTRGAPPYPDVNTFDITV 248
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 96/217 (44%), Gaps = 28/217 (12%)
Query: 415 LGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWA 474
+G G VYK + V + + Q+ + F EV + K +H NI+ Y
Sbjct: 36 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 95
Query: 475 PDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVH 534
P + +++ + +L + L T + IA+ TA+G+ YLH S +H
Sbjct: 96 P-QLAIVTQWCEGSSLYHHLH----IIETKFEMIKLIDIARQTAQGMDYLHAKS---IIH 147
Query: 535 GDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGF--MGGALPYMKP--VQTEKT 590
D+K +NI L D I DFGL+ + S S F + G++ +M P ++ +
Sbjct: 148 RDLKSNNIFLHEDLTVKIGDFGLA----TEKSRWSGSHQFEQLSGSILWMAPEVIRMQDK 203
Query: 591 NNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
N Y DVY+FG+VL EL+TG+ P
Sbjct: 204 NPYSFQS------------DVYAFGIVLYELMTGQLP 228
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 107/238 (44%), Gaps = 38/238 (15%)
Query: 414 VLGKSGLGIVYKVVL----GNGIPVAVR---RLGEGGEQRHREFVTEVQAIAKVKHPNIV 466
V+G+ G VY L G I AV+ R+ + GE +F+TE + HPN++
Sbjct: 38 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS--QFLTEGIIMKDFSHPNVL 95
Query: 467 KLRAYYWAPD-EKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLH 525
L + L++ ++ +G+L N +R P+ L++AKG + +L
Sbjct: 96 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKG----MKFL- 150
Query: 526 ECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPY---- 581
+ +KFVH D+ N +LD F ++DFGL+R ++ S G LP
Sbjct: 151 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR--DMYDKEFDSVHNKTGAKLPVKWMA 206
Query: 582 MKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEV 639
++ +QT+K K DV+SFGV+L EL+T +P + I V
Sbjct: 207 LESLQTQKFTT---------------KSDVWSFGVLLWELMTRGAPPYPDVNTFDITV 249
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 107/238 (44%), Gaps = 38/238 (15%)
Query: 414 VLGKSGLGIVYKVVL----GNGIPVAVR---RLGEGGEQRHREFVTEVQAIAKVKHPNIV 466
V+G+ G VY L G I AV+ R+ + GE +F+TE + HPN++
Sbjct: 42 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS--QFLTEGIIMKDFSHPNVL 99
Query: 467 KLRAYYWAPD-EKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLH 525
L + L++ ++ +G+L N +R P+ L++AKG + +L
Sbjct: 100 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKG----MKFL- 154
Query: 526 ECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPY---- 581
+ +KFVH D+ N +LD F ++DFGL+R ++ S G LP
Sbjct: 155 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR--DMYDKEFDSVHNKTGAKLPVKWMA 210
Query: 582 MKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEV 639
++ +QT+K K DV+SFGV+L EL+T +P + I V
Sbjct: 211 LESLQTQKFTT---------------KSDVWSFGVLLWELMTRGAPPYPDVNTFDITV 253
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 107/238 (44%), Gaps = 38/238 (15%)
Query: 414 VLGKSGLGIVYKVVL----GNGIPVAVR---RLGEGGEQRHREFVTEVQAIAKVKHPNIV 466
V+G+ G VY L G I AV+ R+ + GE +F+TE + HPN++
Sbjct: 35 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS--QFLTEGIIMKDFSHPNVL 92
Query: 467 KLRAYYWAPD-EKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLH 525
L + L++ ++ +G+L N +R P+ L++AKG + +L
Sbjct: 93 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKG----MKFL- 147
Query: 526 ECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPY---- 581
+ +KFVH D+ N +LD F ++DFGL+R ++ S G LP
Sbjct: 148 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR--DMYDKEFDSVHNKTGAKLPVKWMA 203
Query: 582 MKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEV 639
++ +QT+K K DV+SFGV+L EL+T +P + I V
Sbjct: 204 LESLQTQKFTT---------------KSDVWSFGVLLWELMTRGAPPYPDVNTFDITV 246
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 107/238 (44%), Gaps = 38/238 (15%)
Query: 414 VLGKSGLGIVYKVVL----GNGIPVAVR---RLGEGGEQRHREFVTEVQAIAKVKHPNIV 466
V+G+ G VY L G I AV+ R+ + GE +F+TE + HPN++
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS--QFLTEGIIMKDFSHPNVL 94
Query: 467 KLRAYYWAPD-EKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLH 525
L + L++ ++ +G+L N +R P+ L++AKG + +L
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKG----MKFL- 149
Query: 526 ECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPY---- 581
+ +KFVH D+ N +LD F ++DFGL+R ++ S G LP
Sbjct: 150 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR--DMYDKEFDSVHNKTGAKLPVKWMA 205
Query: 582 MKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEV 639
++ +QT+K K DV+SFGV+L EL+T +P + I V
Sbjct: 206 LESLQTQKFTT---------------KSDVWSFGVLLWELMTRGAPPYPDVNTFDITV 248
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 107/238 (44%), Gaps = 38/238 (15%)
Query: 414 VLGKSGLGIVYKVVL----GNGIPVAVR---RLGEGGEQRHREFVTEVQAIAKVKHPNIV 466
V+G+ G VY L G I AV+ R+ + GE +F+TE + HPN++
Sbjct: 96 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS--QFLTEGIIMKDFSHPNVL 153
Query: 467 KLRAYYWAPD-EKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLH 525
L + L++ ++ +G+L N +R P+ L++AKG + +L
Sbjct: 154 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKG----MKFL- 208
Query: 526 ECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPY---- 581
+ +KFVH D+ N +LD F ++DFGL+R ++ S G LP
Sbjct: 209 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR--DMYDKEFDSVHNKTGAKLPVKWMA 264
Query: 582 MKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEV 639
++ +QT+K K DV+SFGV+L EL+T +P + I V
Sbjct: 265 LESLQTQKFTT---------------KSDVWSFGVLLWELMTRGAPPYPDVNTFDITV 307
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 124/291 (42%), Gaps = 50/291 (17%)
Query: 415 LGKSGLGIVYKVVLGNGIP------VAVRRLGEGGEQRHR-EFVTEVQAIAKVKHPNIVK 467
LG+ G+VY+ V + VA++ + E R R EF+ E + + ++V+
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 86
Query: 468 LRAYYWAPDEKLLISDFISNGNLANALRG-----RNGQPSTSLSWSTRLRIAKGTARGLA 522
L L+I + ++ G+L + LR N S S +++A A G+A
Sbjct: 87 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 146
Query: 523 YLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYM 582
YL+ KFVH D+ N ++ DF I DFG++R +I + GG G LP
Sbjct: 147 YLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTR--DIXETDXXRKGG--KGLLPV- 198
Query: 583 KPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDL 642
+ +PE+ G DV+SFGVVL E+ T L+ + +
Sbjct: 199 ---------RWMSPESLKDGVFTTYS-DVWSFGVVLWEIAT-----LAEQPYQGLSNEQV 243
Query: 643 VRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRP 693
+R+V +G + P D ML F L C + +P++RP
Sbjct: 244 LRFVMEGGLLDKP--DNCPDML-------------FELMRMCWQYNPKMRP 279
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 135/302 (44%), Gaps = 55/302 (18%)
Query: 414 VLGKSGLGIVYK-VVLGNG----IPVAVRRLGEGGEQR-HREFVTEVQAIAKVKHPNIVK 467
VLG G VYK + + +G IPVA++ L E + ++E + E +A V P + +
Sbjct: 24 VLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSR 83
Query: 468 LRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTS--LSWSTRLRIAKGTARGLAYLH 525
L +L ++ + G L + +R G+ + L+W ++ A+G++YL
Sbjct: 84 LLGICLTSTVQL-VTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQI------AKGMSYLE 136
Query: 526 ECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPV 585
+ + VH D+ N+L+ + I+DFGL+RL++I + GG + P+
Sbjct: 137 DV---RLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKV--------PI 185
Query: 586 QTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTSIEVPDLVR 644
+ + A E+ + R + DV+S+GV + EL+T G P + E+PDL
Sbjct: 186 K------WMALES-ILRRRFTHQSDVWSYGVTVWELMTFGAKPY---DGIPAREIPDL-- 233
Query: 645 WVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLER 704
++KG P +D V+ + + C D E RPR + + R
Sbjct: 234 -LEKGERLPQPPICTID---------------VYMIMVKCWMIDSECRPRFRELVSEFSR 277
Query: 705 IG 706
+
Sbjct: 278 MA 279
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 121/293 (41%), Gaps = 46/293 (15%)
Query: 415 LGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWA 474
+G G+V+ N VA++ + EG +F+ E + + K+ HP +V+L
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 71
Query: 475 PDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVH 534
L+ +F+ +G L++ LR + G + T L + G+AYL E +H
Sbjct: 72 QAPICLVFEFMEHGCLSDYLRTQRGLFAA----ETLLGMCLDVCEGMAYLEEAC---VIH 124
Query: 535 GDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYR 594
D+ N L+ + +SDFG++R + + SS+G T+ +
Sbjct: 125 RDLAARNCLVGENQVIKVSDFGMTRFV-LDDQYTSSTG--------------TKFPVKWA 169
Query: 595 APEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTSIEVPDLVRWVKKGFEEE 653
+PE +R K DV+SFGV++ E+ + GK P + + S +E + GF
Sbjct: 170 SPEV-FSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVED------ISTGFRLY 222
Query: 654 NPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERIG 706
P L H V+ + C + PE RP + L I
Sbjct: 223 KP--------RLASTH-------VYQIMNHCWKERPEDRPAFSRLLRQLAEIA 260
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 121/293 (41%), Gaps = 46/293 (15%)
Query: 415 LGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWA 474
+G G+V+ N VA++ + EG +F+ E + + K+ HP +V+L
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 73
Query: 475 PDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVH 534
L+ +F+ +G L++ LR + G + T L + G+AYL E +H
Sbjct: 74 QAPICLVFEFMEHGCLSDYLRTQRGLFAA----ETLLGMCLDVCEGMAYLEEAC---VIH 126
Query: 535 GDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYR 594
D+ N L+ + +SDFG++R + + SS+G T+ +
Sbjct: 127 RDLAARNCLVGENQVIKVSDFGMTRFV-LDDQYTSSTG--------------TKFPVKWA 171
Query: 595 APEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTSIEVPDLVRWVKKGFEEE 653
+PE +R K DV+SFGV++ E+ + GK P + + S +E + GF
Sbjct: 172 SPEV-FSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVED------ISTGFRLY 224
Query: 654 NPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERIG 706
P L H V+ + C + PE RP + L I
Sbjct: 225 KP--------RLASTH-------VYQIMNHCWKERPEDRPAFSRLLRQLAEIA 262
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 120/293 (40%), Gaps = 46/293 (15%)
Query: 415 LGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWA 474
+G G+V+ N VA++ + EG +F+ E + + K+ HP +V+L
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 76
Query: 475 PDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVH 534
L+ +F+ +G L++ LR + G + T L + G+AYL E +H
Sbjct: 77 QAPICLVFEFMEHGCLSDYLRTQRGLFAA----ETLLGMCLDVCEGMAYLEEAC---VIH 129
Query: 535 GDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYR 594
D+ N L+ + +SDFG++R + + SS+G T+ +
Sbjct: 130 RDLAARNCLVGENQVIKVSDFGMTRFV-LDDQYTSSTG--------------TKFPVKWA 174
Query: 595 APEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTSIEVPDLVRWVKKGFEEE 653
+PE +R K DV+SFGV++ E+ + GK P + + S +E + GF
Sbjct: 175 SPEV-FSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVED------ISTGFRLY 227
Query: 654 NPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERIG 706
P L H V+ + C PE RP + L I
Sbjct: 228 KP--------RLASTH-------VYQIMNHCWRERPEDRPAFSRLLRQLAEIA 265
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/258 (29%), Positives = 119/258 (46%), Gaps = 32/258 (12%)
Query: 386 SGKGEGELVAIDKGFTFELDELLRASAYVLGKSGLGIVYKVV-LGNGIPVAVRRLGEGGE 444
SG+ + + V G T EL EL VL + G VY+ +G+G A++RL E
Sbjct: 11 SGRDQSDFV----GQTVELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEE 66
Query: 445 QRHREFVTEVQAIAKVK-HPNIVKLRAYYWAPDEK--------LLISDFISNGNLANALR 495
+++R + EV + K+ HPNIV+ + E+ LL+++ + G L L+
Sbjct: 67 EKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTE-LCKGQLVEFLK 125
Query: 496 GRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDF 555
+ LS T L+I T R + ++H P +H D+K N+LL N + DF
Sbjct: 126 --KMESRGPLSCDTVLKIFYQTCRAVQHMHRQKP-PIIHRDLKVENLLLSNQGTIKLCDF 182
Query: 556 GLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNN----YRAPE-ARVPGNRPM-QKW 609
G + I+ + P S AL V+ E T N YR PE + N P+ +K
Sbjct: 183 GSATTIS---HYPDYSWSAQRRAL-----VEEEITRNTTPMYRTPEIIDLYSNFPIGEKQ 234
Query: 610 DVYSFGVVLLELLTGKSP 627
D+++ G +L L + P
Sbjct: 235 DIWALGCILYLLCFRQHP 252
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 125/291 (42%), Gaps = 50/291 (17%)
Query: 415 LGKSGLGIVYKVVLGNGIP------VAVRRLGEGGEQRHR-EFVTEVQAIAKVKHPNIVK 467
LG+ G+VY+ V + VA++ + E R R EF+ E + + ++V+
Sbjct: 18 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 77
Query: 468 LRAYYWAPDEKLLISDFISNGNLANALRG-----RNGQPSTSLSWSTRLRIAKGTARGLA 522
L L+I + ++ G+L + LR N S S +++A A G+A
Sbjct: 78 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 137
Query: 523 YLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYM 582
YL+ KFVH D+ N ++ DF I DFG++R +I + GG G LP
Sbjct: 138 YLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTR--DIXETDXXRKGG--KGLLPV- 189
Query: 583 KPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDL 642
+ +PE+ G DV+SFGVVL E+ T L+ + +
Sbjct: 190 ---------RWMSPESLKDGVFTTYS-DVWSFGVVLWEIAT-----LAEQPYQGLSNEQV 234
Query: 643 VRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRP 693
+R+V +G + P D MLL+ L C + +P++RP
Sbjct: 235 LRFVMEGGLLDKP--DNCPDMLLE-------------LMRMCWQYNPKMRP 270
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 132/296 (44%), Gaps = 60/296 (20%)
Query: 415 LGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWA 474
LG G V+ VAV+ + + G F+ E + ++H +VKL A
Sbjct: 190 LGAGQFGEVWMATYNKHTKVAVKTM-KPGSMSVEAFLAEANVMKTLQHDKLVKLHAVV-T 247
Query: 475 PDEKLLISDFISNGNLANALRGRNG--QPSTSLSWSTRLRIAKGTARGLAYLHECSPRKF 532
+ +I++F++ G+L + L+ G QP L + + A G+A++ + R +
Sbjct: 248 KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKL-----IDFSAQIAEGMAFIEQ---RNY 299
Query: 533 VHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNN 592
+H D++ +NIL+ I+DFGL+R+ G P
Sbjct: 300 IHRDLRAANILVSASLVCKIADFGLARV---------------GAKFPI----------K 334
Query: 593 YRAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTSIEVPDLVRWVKKGFE 651
+ APEA G+ ++ DV+SFG++L+E++T G+ P P S P+++R +++G+
Sbjct: 335 WTAPEAINFGSFTIKS-DVWSFGILLMEIVTYGRIP--YPGMSN----PEVIRALERGYR 387
Query: 652 EENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERIGT 707
P + +E ++++ + C + PE RP + + L+ T
Sbjct: 388 MPRP------------ENCPEE---LYNIMMRCWKNRPEERPTFEYIQSVLDDFYT 428
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 130/314 (41%), Gaps = 69/314 (21%)
Query: 414 VLGKSGLGIVYKVVL---GNGIPVAVRRLGE-GGEQRHREFVTEVQAIAKV-KHPNIVKL 468
V+G+ G V K + G + A++R+ E + HR+F E++ + K+ HPNI+ L
Sbjct: 32 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINL 91
Query: 469 ------RAYYWAPDEKLLISDFISNGNLANALRGRN-----------GQPSTSLSWSTRL 511
R Y + L ++ +GNL + LR +++LS L
Sbjct: 92 LGACEHRGYLY------LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLL 145
Query: 512 RIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSS 571
A ARG+ YL S ++F+H D+ NIL+ ++ I+DFGLSR
Sbjct: 146 HFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSR------------ 190
Query: 572 GGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSP 631
G Y+K + A E+ + + DV+S+GV+L E+++ L
Sbjct: 191 -----GQEVYVKKTMGRLPVRWMAIES-LNYSVYTTNSDVWSYGVLLWEIVS-----LGG 239
Query: 632 TTSTSIEVPDLVRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEV 691
T + +L + +G+ E PL+ E V+ L C P
Sbjct: 240 TPYCGMTCAELYEKLPQGYRLEKPLN------------CDDE---VYDLMRQCWREKPYE 284
Query: 692 RPRMKNVSENLERI 705
RP + +L R+
Sbjct: 285 RPSFAQILVSLNRM 298
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 130/314 (41%), Gaps = 69/314 (21%)
Query: 414 VLGKSGLGIVYKVVL---GNGIPVAVRRLGE-GGEQRHREFVTEVQAIAKV-KHPNIVKL 468
V+G+ G V K + G + A++R+ E + HR+F E++ + K+ HPNI+ L
Sbjct: 22 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINL 81
Query: 469 ------RAYYWAPDEKLLISDFISNGNLANALRGRN-----------GQPSTSLSWSTRL 511
R Y + L ++ +GNL + LR +++LS L
Sbjct: 82 LGACEHRGYLY------LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLL 135
Query: 512 RIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSS 571
A ARG+ YL S ++F+H D+ NIL+ ++ I+DFGLSR
Sbjct: 136 HFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSR------------ 180
Query: 572 GGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSP 631
G Y+K + A E+ + + DV+S+GV+L E+++ L
Sbjct: 181 -----GQEVYVKKTMGRLPVRWMAIES-LNYSVYTTNSDVWSYGVLLWEIVS-----LGG 229
Query: 632 TTSTSIEVPDLVRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEV 691
T + +L + +G+ E PL+ E V+ L C P
Sbjct: 230 TPYCGMTCAELYEKLPQGYRLEKPLN------------CDDE---VYDLMRQCWREKPYE 274
Query: 692 RPRMKNVSENLERI 705
RP + +L R+
Sbjct: 275 RPSFAQILVSLNRM 288
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 121/293 (41%), Gaps = 46/293 (15%)
Query: 415 LGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWA 474
+G G+V+ N VA++ + EG +F+ E + + K+ HP +V+L
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIKEGS-MSEDDFIEEAEVMMKLSHPKLVQLYGVCLE 93
Query: 475 PDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVH 534
L+ +F+ +G L++ LR + G + T L + G+AYL E +H
Sbjct: 94 QAPICLVFEFMEHGCLSDYLRTQRGLFAA----ETLLGMCLDVCEGMAYLEEAC---VIH 146
Query: 535 GDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYR 594
D+ N L+ + +SDFG++R + + SS+G T+ +
Sbjct: 147 RDLAARNCLVGENQVIKVSDFGMTRFV-LDDQYTSSTG--------------TKFPVKWA 191
Query: 595 APEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTSIEVPDLVRWVKKGFEEE 653
+PE +R K DV+SFGV++ E+ + GK P + + S +E + GF
Sbjct: 192 SPEV-FSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVED------ISTGFRLY 244
Query: 654 NPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERIG 706
P L H V+ + C + PE RP + L I
Sbjct: 245 KP--------RLASTH-------VYQIMNHCWKERPEDRPAFSRLLRQLAEIA 282
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 124/291 (42%), Gaps = 50/291 (17%)
Query: 415 LGKSGLGIVYKVVLGNGIP------VAVRRLGEGGEQRHR-EFVTEVQAIAKVKHPNIVK 467
LG+ G+VY+ V + VA++ + E R R EF+ E + + ++V+
Sbjct: 24 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 83
Query: 468 LRAYYWAPDEKLLISDFISNGNLANALRG-----RNGQPSTSLSWSTRLRIAKGTARGLA 522
L L+I + ++ G+L + LR N S S +++A A G+A
Sbjct: 84 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 143
Query: 523 YLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYM 582
YL+ KFVH D+ N ++ DF I DFG++R +I + GG G LP
Sbjct: 144 YLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTR--DIYETDYYRKGG--KGLLPV- 195
Query: 583 KPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDL 642
+ +PE+ G DV+SFGVVL E+ T L+ + +
Sbjct: 196 ---------RWMSPESLKDGVFTTYS-DVWSFGVVLWEIAT-----LAEQPYQGLSNEQV 240
Query: 643 VRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRP 693
+R+V +G + P D ML F L C + +P++RP
Sbjct: 241 LRFVMEGGLLDKP--DNCPDML-------------FELMRMCWQYNPKMRP 276
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 102/223 (45%), Gaps = 29/223 (13%)
Query: 430 NGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEK--LLISDFISN 487
G VAV++L G + R+F E+Q + + IVK R + P + L+ +++ +
Sbjct: 39 TGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPS 98
Query: 488 GNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDND 547
G L + L+ + L S L + +G+ YL R+ VH D+ NIL++++
Sbjct: 99 GCLRDFLQRHRAR----LDASRLLLYSSQICKGMEYL---GSRRCVHRDLAARNILVESE 151
Query: 548 FQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQ 607
I+DFGL++L+ + + Y+ + + APE+ + N +
Sbjct: 152 AHVKIADFGLAKLLPLDKDY-------------YVVREPGQSPIFWYAPES-LSDNIFSR 197
Query: 608 KWDVYSFGVVLLELLTGKSPELSPTTS------TSIEVPDLVR 644
+ DV+SFGVVL EL T SP+ +VP L R
Sbjct: 198 QSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALCR 240
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 103/233 (44%), Gaps = 24/233 (10%)
Query: 397 DKGFTFELDELLRASAYVLGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHREFVTEVQA 456
D + +E++ + +G G VYK + V + ++ + ++ + F EV
Sbjct: 26 DSSYYWEIEASEVMLSTRIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAV 85
Query: 457 IAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKG 516
+ K +H NI+ Y D +++ + +L L + T + IA+
Sbjct: 86 LRKTRHVNILLFMGYM-TKDNLAIVTQWCEGSSLYKHLHVQE----TKFQMFQLIDIARQ 140
Query: 517 TARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMG 576
TA+G+ YLH + +H D+K +NI L I DFGL+ + + +
Sbjct: 141 TAQGMDYLH---AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQP--T 195
Query: 577 GALPYMKPVQTEKTNNYRAPEA-RVPGNRPMQ-KWDVYSFGVVLLELLTGKSP 627
G++ +M APE R+ N P + DVYS+G+VL EL+TG+ P
Sbjct: 196 GSVLWM------------APEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELP 236
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 105/234 (44%), Gaps = 39/234 (16%)
Query: 405 DELLRASAYVLGKS-GLGIVYKVVLG----NGIPVAVRRLGEGGEQRHR------EFVTE 453
D ++ Y+LG + G+G KV +G G VAV+ L Q+ R + E
Sbjct: 10 DGRVKIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNR---QKIRSLDVVGKIRRE 66
Query: 454 VQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRI 513
+Q + +HP+I+KL P + ++ +++S G L + + +NG+ L R+
Sbjct: 67 IQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYI-CKNGR----LDEKESRRL 121
Query: 514 AKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGG 573
+ G+ Y C VH D+KP N+LLD I+DFGLS ++ S G
Sbjct: 122 FQQILSGVDY---CHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMM--------SDGE 170
Query: 574 FMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
F+ + + NY APE + D++S GV+L LL G P
Sbjct: 171 FLRXSC---------GSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLP 215
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 124/291 (42%), Gaps = 50/291 (17%)
Query: 415 LGKSGLGIVYKVVLGNGIP------VAVRRLGEGGEQRHR-EFVTEVQAIAKVKHPNIVK 467
LG+ G+VY+ V + VA++ + E R R EF+ E + + ++V+
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 79
Query: 468 LRAYYWAPDEKLLISDFISNGNLANALRG-----RNGQPSTSLSWSTRLRIAKGTARGLA 522
L L+I + ++ G+L + LR N S S +++A A G+A
Sbjct: 80 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 139
Query: 523 YLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYM 582
YL+ KFVH D+ N ++ DF I DFG++R +I + GG G LP
Sbjct: 140 YLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTR--DIYETDYYRKGG--KGLLPV- 191
Query: 583 KPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDL 642
+ +PE+ G DV+SFGVVL E+ T L+ + +
Sbjct: 192 ---------RWMSPESLKDGVFTTYS-DVWSFGVVLWEIAT-----LAEQPYQGLSNEQV 236
Query: 643 VRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRP 693
+R+V +G + P D ML F L C + +P++RP
Sbjct: 237 LRFVMEGGLLDKP--DNCPDML-------------FELMRMCWQYNPKMRP 272
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 124/291 (42%), Gaps = 50/291 (17%)
Query: 415 LGKSGLGIVYKVVLGNGIP------VAVRRLGEGGEQRHR-EFVTEVQAIAKVKHPNIVK 467
LG+ G+VY+ V + VA++ + E R R EF+ E + + ++V+
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 85
Query: 468 LRAYYWAPDEKLLISDFISNGNLANALRG-----RNGQPSTSLSWSTRLRIAKGTARGLA 522
L L+I + ++ G+L + LR N S S +++A A G+A
Sbjct: 86 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 145
Query: 523 YLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYM 582
YL+ KFVH D+ N ++ DF I DFG++R +I + GG G LP
Sbjct: 146 YLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTR--DIYETDYYRKGG--KGLLPV- 197
Query: 583 KPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDL 642
+ +PE+ G DV+SFGVVL E+ T L+ + +
Sbjct: 198 ---------RWMSPESLKDGVFTTYS-DVWSFGVVLWEIAT-----LAEQPYQGLSNEQV 242
Query: 643 VRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRP 693
+R+V +G + P D ML F L C + +P++RP
Sbjct: 243 LRFVMEGGLLDKP--DNCPDML-------------FELMRMCWQYNPKMRP 278
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 124/291 (42%), Gaps = 50/291 (17%)
Query: 415 LGKSGLGIVYKVVLGNGIP------VAVRRLGEGGEQRHR-EFVTEVQAIAKVKHPNIVK 467
LG+ G+VY+ V + VA++ + E R R EF+ E + + ++V+
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 86
Query: 468 LRAYYWAPDEKLLISDFISNGNLANALRG-----RNGQPSTSLSWSTRLRIAKGTARGLA 522
L L+I + ++ G+L + LR N S S +++A A G+A
Sbjct: 87 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 146
Query: 523 YLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYM 582
YL+ KFVH D+ N ++ DF I DFG++R +I + GG G LP
Sbjct: 147 YLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTR--DIYETDYYRKGG--KGLLPV- 198
Query: 583 KPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDL 642
+ +PE+ G DV+SFGVVL E+ T L+ + +
Sbjct: 199 ---------RWMSPESLKDGVFTTYS-DVWSFGVVLWEIAT-----LAEQPYQGLSNEQV 243
Query: 643 VRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRP 693
+R+V +G + P D ML F L C + +P++RP
Sbjct: 244 LRFVMEGGLLDKP--DNCPDML-------------FELMRMCWQYNPKMRP 279
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 124/291 (42%), Gaps = 50/291 (17%)
Query: 415 LGKSGLGIVYKVVLGNGIP------VAVRRLGEGGEQRHR-EFVTEVQAIAKVKHPNIVK 467
LG+ G+VY+ V + VA++ + E R R EF+ E + + ++V+
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 85
Query: 468 LRAYYWAPDEKLLISDFISNGNLANALRG-----RNGQPSTSLSWSTRLRIAKGTARGLA 522
L L+I + ++ G+L + LR N S S +++A A G+A
Sbjct: 86 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 145
Query: 523 YLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYM 582
YL+ KFVH D+ N ++ DF I DFG++R +I + GG G LP
Sbjct: 146 YLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTR--DIYETDYYRKGG--KGLLPV- 197
Query: 583 KPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDL 642
+ +PE+ G DV+SFGVVL E+ T L+ + +
Sbjct: 198 ---------RWMSPESLKDGVFTTYS-DVWSFGVVLWEIAT-----LAEQPYQGLSNEQV 242
Query: 643 VRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRP 693
+R+V +G + P D ML F L C + +P++RP
Sbjct: 243 LRFVMEGGLLDKP--DNCPDML-------------FELMRMCWQYNPKMRP 278
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 107/227 (47%), Gaps = 40/227 (17%)
Query: 415 LGKSGLGIVYK-VVLGNGIPVAVRRLGEG---GE----QRHREFVTEVQAIAKVKHPNIV 466
+GK G G+V+K ++ + VA++ L G GE ++ +EF EV ++ + HPNIV
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 467 KLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHE 526
KL P ++ +F+ G+L + L + + + WS +LR+ A G+ Y+
Sbjct: 87 KLYGLMHNPPR--MVMEFVPCGDLYHRLLDK----AHPIKWSVKLRLMLDIALGIEYMQN 140
Query: 527 CSPRKFVHGDIKPSNILLD--NDFQPY---ISDFGLSRLINITGNNPSSSGGFMGGALPY 581
+P VH D++ NI L ++ P ++DFGLS+ + S G +G
Sbjct: 141 QNP-PIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ------QSVHSVSGLLGNF--- 190
Query: 582 MKPVQTEKTNNYRAPEAR-VPGNRPMQKWDVYSFGVVLLELLTGKSP 627
+ APE +K D YSF ++L +LTG+ P
Sbjct: 191 ----------QWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGP 227
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 104/223 (46%), Gaps = 29/223 (13%)
Query: 430 NGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEK--LLISDFISN 487
G VAV++L G + R+F E+Q + + IVK R + P + L+ +++ +
Sbjct: 38 TGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPS 97
Query: 488 GNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDND 547
G L + L+ + L S L + +G+ YL R+ VH D+ NIL++++
Sbjct: 98 GCLRDFLQRHRAR----LDASRLLLYSSQICKGMEYL---GSRRCVHRDLAARNILVESE 150
Query: 548 FQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQ 607
I+DFGL++L+ + + + P P+ + APE+ + N +
Sbjct: 151 AHVKIADFGLAKLLPLDKD-------YYVVREPGQSPI------FWYAPES-LSDNIFSR 196
Query: 608 KWDVYSFGVVLLELLTGKSPELSPTTS------TSIEVPDLVR 644
+ DV+SFGVVL EL T SP+ + +VP L R
Sbjct: 197 QSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGSERDVPALSR 239
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 97/206 (47%), Gaps = 23/206 (11%)
Query: 430 NGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEK--LLISDFISN 487
G VAV++L G + R+F E+Q + + IVK R + P + L+ +++ +
Sbjct: 51 TGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPS 110
Query: 488 GNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDND 547
G L + L+ + L S L + +G+ YL R+ VH D+ NIL++++
Sbjct: 111 GCLRDFLQRHRAR----LDASRLLLYSSQICKGMEYL---GSRRCVHRDLAARNILVESE 163
Query: 548 FQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQ 607
I+DFGL++L+ + + Y+ + + APE+ + N +
Sbjct: 164 AHVKIADFGLAKLLPLDKDY-------------YVVREPGQSPIFWYAPES-LSDNIFSR 209
Query: 608 KWDVYSFGVVLLELLTGKSPELSPTT 633
+ DV+SFGVVL EL T SP+
Sbjct: 210 QSDVWSFGVVLYELFTYCDKSCSPSA 235
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 124/291 (42%), Gaps = 50/291 (17%)
Query: 415 LGKSGLGIVYKVVLGNGIP------VAVRRLGEGGEQRHR-EFVTEVQAIAKVKHPNIVK 467
LG+ G+VY+ V + VA++ + E R R EF+ E + + ++V+
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 92
Query: 468 LRAYYWAPDEKLLISDFISNGNLANALRG-----RNGQPSTSLSWSTRLRIAKGTARGLA 522
L L+I + ++ G+L + LR N S S +++A A G+A
Sbjct: 93 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 152
Query: 523 YLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYM 582
YL+ KFVH D+ N ++ DF I DFG++R +I + GG G LP
Sbjct: 153 YLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTR--DIYETDYYRKGG--KGLLPV- 204
Query: 583 KPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDL 642
+ +PE+ G DV+SFGVVL E+ T L+ + +
Sbjct: 205 ---------RWMSPESLKDGVFTTYS-DVWSFGVVLWEIAT-----LAEQPYQGLSNEQV 249
Query: 643 VRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRP 693
+R+V +G + P D ML F L C + +P++RP
Sbjct: 250 LRFVMEGGLLDKP--DNCPDML-------------FELMRMCWQYNPKMRP 285
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 96/228 (42%), Gaps = 37/228 (16%)
Query: 414 VLGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHREFVTE--VQAIAKVKHPNIVKL--- 468
++G+ G VYK L PVAV+ Q F+ E + + ++H NI +
Sbjct: 20 LIGRGRYGAVYKGSLDER-PVAVKVFSFANRQ---NFINEKNIYRVPLMEHDNIARFIVG 75
Query: 469 --RAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHE 526
R E LL+ ++ NG+L L W + R+A RGLAYLH
Sbjct: 76 DERVTADGRMEYLLVMEYYPNGSLXKYLSLHTS------DWVSSCRLAHSVTRGLAYLHT 129
Query: 527 CSPR------KFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALP 580
PR H D+ N+L+ ND ISDFGLS + +TGN G A+
Sbjct: 130 ELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLS--MRLTGNRLVRPGEEDNAAIS 187
Query: 581 ------YMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELL 622
YM P E N R E+ +++ D+Y+ G++ E+
Sbjct: 188 EVGTIRYMAPEVLEGAVNLRDXES------ALKQVDMYALGLIYWEIF 229
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 108/247 (43%), Gaps = 43/247 (17%)
Query: 398 KGFTFELDELLRASAYVLGKSGLGIVY-------KVVLGNGIPVAVRRLGEGGEQRHREF 450
+ FT + +++R LGK G VY K ++ + + EG E + R
Sbjct: 9 RKFTIDDFDIVRP----LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRR- 63
Query: 451 VTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTR 510
E++ + ++HPNI+++ Y+ L+ +F G L L+ ++G+ S +
Sbjct: 64 --EIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQ-KHGRFDEQRSATFM 120
Query: 511 LRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSS 570
+A LH C RK +H DIKP N+L+ + I+DFG S + PS
Sbjct: 121 EELADA-------LHYCHERKVIHRDIKPENLLMGYKGELKIADFGWS------VHAPSL 167
Query: 571 SGGFMGGALPYMKPVQTE-KTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPEL 629
M G L Y+ P E KT++ +K D++ GV+ E L G P
Sbjct: 168 RRRXMCGTLDYLPPEMIEGKTHD--------------EKVDLWCAGVLCYEFLVGMPPFD 213
Query: 630 SPTTSTS 636
SP+ + +
Sbjct: 214 SPSHTET 220
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 100/230 (43%), Gaps = 39/230 (16%)
Query: 415 LGKSGLGIVY-------KVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVK 467
LGK G VY K ++ + + EG E + R E++ + ++HPNI++
Sbjct: 23 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRR---EIEIQSHLRHPNILR 79
Query: 468 LRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHEC 527
+ Y+ L+ +F G L L+ ++G+ S + +A LH C
Sbjct: 80 MYNYFHDRKRIYLMLEFAPRGELYKELQ-KHGRFDEQRSATFMEELADA-------LHYC 131
Query: 528 SPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQT 587
RK +H DIKP N+L+ + I+DFG S + PS M G L Y+ P
Sbjct: 132 HERKVIHRDIKPENLLMGYKGELKIADFGWS------VHAPSLRRRXMCGTLDYLPPEMI 185
Query: 588 E-KTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTS 636
E KT++ +K D++ GV+ E L G P SP+ + +
Sbjct: 186 EGKTHD--------------EKVDLWCAGVLCYEFLVGMPPFDSPSHTET 221
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 124/291 (42%), Gaps = 50/291 (17%)
Query: 415 LGKSGLGIVYKVVLGNGIP------VAVRRLGEGGEQRHR-EFVTEVQAIAKVKHPNIVK 467
LG+ G+VY+ V + VA++ + E R R EF+ E + + ++V+
Sbjct: 55 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 114
Query: 468 LRAYYWAPDEKLLISDFISNGNLANALRG-----RNGQPSTSLSWSTRLRIAKGTARGLA 522
L L+I + ++ G+L + LR N S S +++A A G+A
Sbjct: 115 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 174
Query: 523 YLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYM 582
YL+ KFVH D+ N ++ DF I DFG++R +I + GG G LP
Sbjct: 175 YLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTR--DIYETDYYRKGG--KGLLPV- 226
Query: 583 KPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDL 642
+ +PE+ G DV+SFGVVL E+ T L+ + +
Sbjct: 227 ---------RWMSPESLKDGVFTTYS-DVWSFGVVLWEIAT-----LAEQPYQGLSNEQV 271
Query: 643 VRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRP 693
+R+V +G + P D ML F L C + +P++RP
Sbjct: 272 LRFVMEGGLLDKP--DNCPDML-------------FELMRMCWQYNPKMRP 307
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 103/221 (46%), Gaps = 34/221 (15%)
Query: 415 LGKSGLGIVYK-----VVLGNG-IPVAVRRLGEGGEQRHR-EFVTEVQAIAKVKHPNIVK 467
LG+ G+VY+ ++ G VAV+ + E R R EF+ E + ++V+
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 468 LRAYYWAPDEKLLISDFISNGNLANALRGRN-------GQPSTSLSWSTRLRIAKGTARG 520
L L++ + +++G+L + LR G+P +L +++A A G
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQ--EMIQMAAEIADG 142
Query: 521 LAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALP 580
+AYL + +KFVH D+ N ++ +DF I DFG++R +I + GG G LP
Sbjct: 143 MAYL---NAKKFVHRDLAARNCMVAHDFTVKIGDFGMTR--DIXETDXXRKGG--KGLLP 195
Query: 581 YMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLEL 621
+ APE+ G D++SFGVVL E+
Sbjct: 196 V----------RWMAPESLKDGVFTTSS-DMWSFGVVLWEI 225
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 103/221 (46%), Gaps = 34/221 (15%)
Query: 415 LGKSGLGIVYK-----VVLGNG-IPVAVRRLGEGGEQRHR-EFVTEVQAIAKVKHPNIVK 467
LG+ G+VY+ ++ G VAV+ + E R R EF+ E + ++V+
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 81
Query: 468 LRAYYWAPDEKLLISDFISNGNLANALRGRN-------GQPSTSLSWSTRLRIAKGTARG 520
L L++ + +++G+L + LR G+P +L +++A A G
Sbjct: 82 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQ--EMIQMAAEIADG 139
Query: 521 LAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALP 580
+AYL + +KFVH D+ N ++ +DF I DFG++R +I + GG G LP
Sbjct: 140 MAYL---NAKKFVHRDLAARNCMVAHDFTVKIGDFGMTR--DIXETDXXRKGG--KGLLP 192
Query: 581 YMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLEL 621
+ APE+ G D++SFGVVL E+
Sbjct: 193 V----------RWMAPESLKDGVFTTSS-DMWSFGVVLWEI 222
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 100/230 (43%), Gaps = 39/230 (16%)
Query: 415 LGKSGLGIVY-------KVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVK 467
LGK G VY K ++ + + EG E + R E++ + ++HPNI++
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRR---EIEIQSHLRHPNILR 78
Query: 468 LRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHEC 527
+ Y+ L+ +F G L L+ ++G+ S + +A LH C
Sbjct: 79 MYNYFHDRKRIYLMLEFAPRGELYKELQ-KHGRFDEQRSATFMEELADA-------LHYC 130
Query: 528 SPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQT 587
RK +H DIKP N+L+ + I+DFG S + PS M G L Y+ P
Sbjct: 131 HERKVIHRDIKPENLLMGYKGELKIADFGWS------VHAPSLRRRXMCGTLDYLPPEMI 184
Query: 588 E-KTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTS 636
E KT++ +K D++ GV+ E L G P SP+ + +
Sbjct: 185 EGKTHD--------------EKVDLWCAGVLCYEFLVGMPPFDSPSHTET 220
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 102/223 (45%), Gaps = 29/223 (13%)
Query: 430 NGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPD--EKLLISDFISN 487
G VAV++L G + R+F E+Q + + IVK R + P E L+ +++ +
Sbjct: 35 TGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRPELRLVMEYLPS 94
Query: 488 GNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDND 547
G L + L+ + L S L + +G+ YL R+ VH D+ NIL++++
Sbjct: 95 GCLRDFLQRHRAR----LDASRLLLYSSQICKGMEYL---GSRRCVHRDLAARNILVESE 147
Query: 548 FQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQ 607
I+DFGL++L+ + + P P+ + APE+ + N +
Sbjct: 148 AHVKIADFGLAKLLPLDKDXXVVRE-------PGQSPI------FWYAPES-LSDNIFSR 193
Query: 608 KWDVYSFGVVLLELLTGKSPELSPTTS------TSIEVPDLVR 644
+ DV+SFGVVL EL T SP+ +VP L R
Sbjct: 194 QSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALCR 236
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 124/291 (42%), Gaps = 50/291 (17%)
Query: 415 LGKSGLGIVYKVVLGNGIP------VAVRRLGEGGEQRHR-EFVTEVQAIAKVKHPNIVK 467
LG+ G+VY+ V + VA++ + E R R EF+ E + + ++V+
Sbjct: 23 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 82
Query: 468 LRAYYWAPDEKLLISDFISNGNLANALRG-----RNGQPSTSLSWSTRLRIAKGTARGLA 522
L L+I + ++ G+L + LR N S S +++A A G+A
Sbjct: 83 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMA 142
Query: 523 YLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYM 582
YL+ KFVH D+ N ++ DF I DFG++R +I + GG G LP
Sbjct: 143 YLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTR--DIYETDYYRKGG--KGLLPV- 194
Query: 583 KPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDL 642
+ +PE+ G DV+SFGVVL E+ T L+ + +
Sbjct: 195 ---------RWMSPESLKDGVFTTYS-DVWSFGVVLWEIAT-----LAEQPYQGLSNEQV 239
Query: 643 VRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRP 693
+R+V +G + P D ML F L C + +P++RP
Sbjct: 240 LRFVMEGGLLDKP--DNCPDML-------------FELMRMCWQYNPKMRP 275
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 128/310 (41%), Gaps = 58/310 (18%)
Query: 415 LGKSGLGIVYKVVLGNGIP------VAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKL 468
LG+ G V+ N +P VAV+ L E E ++F E + + ++H +IV+
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 469 RAYYWAPDEKLLISDFISNGNLANALR-----------GRNGQPSTSLSWSTRLRIAKGT 517
L++ +++ +G+L LR G + P L L +A
Sbjct: 80 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPG-PLGLGQLLAVASQV 138
Query: 518 ARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGG 577
A G+ YL + FVH D+ N L+ I DFG+SR +I + GG
Sbjct: 139 AAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSR--DIYSTDYYRVGGRTML 193
Query: 578 ALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTS 636
+ +M P ++ YR + + DV+SFGVVL E+ T GK P + + +
Sbjct: 194 PIRWMPP----ESILYR---------KFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEA 240
Query: 637 IEVPDLVRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMK 696
I+ + +G E E P + EV A+ C + +P+ R +K
Sbjct: 241 IDC------ITQGRELERPRA------------CPPEVYAIMR---GCWQREPQQRHSIK 279
Query: 697 NVSENLERIG 706
+V L+ +
Sbjct: 280 DVHARLQALA 289
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 103/221 (46%), Gaps = 34/221 (15%)
Query: 415 LGKSGLGIVYK-----VVLGNG-IPVAVRRLGEGGEQRHR-EFVTEVQAIAKVKHPNIVK 467
LG+ G+VY+ ++ G VAV+ + E R R EF+ E + ++V+
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 468 LRAYYWAPDEKLLISDFISNGNLANALRGRN-------GQPSTSLSWSTRLRIAKGTARG 520
L L++ + +++G+L + LR G+P +L +++A A G
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQ--EMIQMAAEIADG 142
Query: 521 LAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALP 580
+AYL + +KFVH D+ N ++ +DF I DFG++R +I + GG G LP
Sbjct: 143 MAYL---NAKKFVHRDLAARNCMVAHDFTVKIGDFGMTR--DIXETDXXRKGG--KGLLP 195
Query: 581 YMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLEL 621
+ APE+ G D++SFGVVL E+
Sbjct: 196 V----------RWMAPESLKDGVFTTSS-DMWSFGVVLWEI 225
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 126/306 (41%), Gaps = 53/306 (17%)
Query: 414 VLGKSGLGIVYKVVL----GNGIPVAVRRLGEG--GEQRHREFVTEVQAIAKVKHPNIVK 467
+LGK G V + L G+ + VAV+ L EF+ E + + HP++ K
Sbjct: 30 MLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAK 89
Query: 468 LRAYYWAPDEK------LLISDFISNGNL-ANALRGRNGQPSTSLSWSTRLRIAKGTARG 520
L K ++I F+ +G+L A L R G+ +L T +R A G
Sbjct: 90 LVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACG 149
Query: 521 LAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALP 580
+ YL S R F+H D+ N +L D ++DFGLSR I SG +
Sbjct: 150 MEYL---SSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKI--------YSGDYYRQGCA 198
Query: 581 YMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTSIEV 639
PV+ + A E+ + N DV++FGV + E++T G++P IE
Sbjct: 199 SKLPVK------WLALES-LADNLYTVHSDVWAFGVTMWEIMTRGQTP------YAGIEN 245
Query: 640 PDLVRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVS 699
++ ++ G + P M + V+ L C ADP+ RP +
Sbjct: 246 AEIYNYLIGGNRLKQPPECMEE---------------VYDLMYQCWSADPKQRPSFTCLR 290
Query: 700 ENLERI 705
LE I
Sbjct: 291 MELENI 296
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 128/310 (41%), Gaps = 58/310 (18%)
Query: 415 LGKSGLGIVYKVVLGNGIP------VAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKL 468
LG+ G V+ N +P VAV+ L E E ++F E + + ++H +IV+
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 469 RAYYWAPDEKLLISDFISNGNLANALR-----------GRNGQPSTSLSWSTRLRIAKGT 517
L++ +++ +G+L LR G + P L L +A
Sbjct: 86 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPG-PLGLGQLLAVASQV 144
Query: 518 ARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGG 577
A G+ YL + FVH D+ N L+ I DFG+SR +I + GG
Sbjct: 145 AAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSR--DIYSTDYYRVGGRTML 199
Query: 578 ALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTS 636
+ +M P ++ YR + + DV+SFGVVL E+ T GK P + + +
Sbjct: 200 PIRWMPP----ESILYR---------KFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEA 246
Query: 637 IEVPDLVRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMK 696
I+ + +G E E P + EV A+ C + +P+ R +K
Sbjct: 247 IDC------ITQGRELERPRA------------CPPEVYAIMR---GCWQREPQQRHSIK 285
Query: 697 NVSENLERIG 706
+V L+ +
Sbjct: 286 DVHARLQALA 295
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 124/291 (42%), Gaps = 50/291 (17%)
Query: 415 LGKSGLGIVYKVVLGNGIP------VAVRRLGEGGEQRHR-EFVTEVQAIAKVKHPNIVK 467
LG+ G+VY+ V + VA++ + E R R EF+ E + + ++V+
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 92
Query: 468 LRAYYWAPDEKLLISDFISNGNLANALRG-----RNGQPSTSLSWSTRLRIAKGTARGLA 522
L L+I + ++ G+L + LR N S S +++A A G+A
Sbjct: 93 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMA 152
Query: 523 YLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYM 582
YL+ KFVH D+ N ++ DF I DFG++R +I + GG G LP
Sbjct: 153 YLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTR--DIYETDYYRKGG--KGLLPV- 204
Query: 583 KPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDL 642
+ +PE+ G DV+SFGVVL E+ T L+ + +
Sbjct: 205 ---------RWMSPESLKDGVFTTYS-DVWSFGVVLWEIAT-----LAEQPYQGLSNEQV 249
Query: 643 VRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRP 693
+R+V +G + P D ML F L C + +P++RP
Sbjct: 250 LRFVMEGGLLDKP--DNCPDML-------------FELMRMCWQYNPKMRP 285
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 128/310 (41%), Gaps = 58/310 (18%)
Query: 415 LGKSGLGIVYKVVLGNGIP------VAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKL 468
LG+ G V+ N +P VAV+ L E E ++F E + + ++H +IV+
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 469 RAYYWAPDEKLLISDFISNGNLANALR-----------GRNGQPSTSLSWSTRLRIAKGT 517
L++ +++ +G+L LR G + P L L +A
Sbjct: 109 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPG-PLGLGQLLAVASQV 167
Query: 518 ARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGG 577
A G+ YL + FVH D+ N L+ I DFG+SR +I + GG
Sbjct: 168 AAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSR--DIYSTDYYRVGGRTML 222
Query: 578 ALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTS 636
+ +M P ++ YR + + DV+SFGVVL E+ T GK P + + +
Sbjct: 223 PIRWMPP----ESILYR---------KFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEA 269
Query: 637 IEVPDLVRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMK 696
I+ + +G E E P + EV A+ C + +P+ R +K
Sbjct: 270 IDC------ITQGRELERPRA------------CPPEVYAIMR---GCWQREPQQRHSIK 308
Query: 697 NVSENLERIG 706
+V L+ +
Sbjct: 309 DVHARLQALA 318
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 115/261 (44%), Gaps = 49/261 (18%)
Query: 415 LGKSGLGIVYKVVLGNGIP------VAVRRLGE-GGEQRHREFVTEVQAIAKVKHPNIVK 467
+G+ G V++ +P VAV+ L E +F E +A+ +PNIVK
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVK 114
Query: 468 LRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLS---WSTRLR------------ 512
L L+ ++++ G+L LR + SLS STR R
Sbjct: 115 LLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCA 174
Query: 513 ----IAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNP 568
IA+ A G+AYL E RKFVH D+ N L+ + I+DFGLSR NI +
Sbjct: 175 EQLCIARQVAAGMAYLSE---RKFVHRDLATRNCLVGENMVVKIADFGLSR--NIYSADY 229
Query: 569 SSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPE 628
+ G A+P + PE+ + NR + DV+++GVVL E+ S
Sbjct: 230 YKADG--NDAIPI----------RWMPPES-IFYNRYTTESDVWAYGVVLWEIF---SYG 273
Query: 629 LSPTTSTSIEVPDLVRWVKKG 649
L P + E +++ +V+ G
Sbjct: 274 LQPYYGMAHE--EVIYYVRDG 292
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 83/177 (46%), Gaps = 31/177 (17%)
Query: 453 EVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNL---ANALRGRNGQPSTSLSWST 509
EV +A +KHPNIV+ R + ++ D+ G+L NA +G Q L W
Sbjct: 73 EVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFV 132
Query: 510 RLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPS 569
++ +A L ++H+ RK +H DIK NI L D + DFG++R++N T
Sbjct: 133 QICLA------LKHVHD---RKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELAR 183
Query: 570 SSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPM-QKWDVYSFGVVLLELLTGK 625
+ G PY Y +PE + N+P K D+++ G VL EL T K
Sbjct: 184 ACIG-----TPY-----------YLSPE--ICENKPYNNKSDIWALGCVLYELCTLK 222
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 95/221 (42%), Gaps = 39/221 (17%)
Query: 415 LGKSGLGIVY-------KVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVK 467
LGK G VY K +L + + G E + R EV+ + ++HPNI++
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR---EVEIQSHLRHPNILR 77
Query: 468 LRAYYWAPDEKLLISDFISNGNLANALRGRNG-QPSTSLSWSTRLRIAKGTARGLAYLHE 526
L Y+ LI ++ G + L+ + + ++ T L A L+Y
Sbjct: 78 LYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITEL------ANALSY--- 128
Query: 527 CSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQ 586
C ++ +H DIKP N+LL + + I+DFG S + PSS + G L Y+ P
Sbjct: 129 CHSKRVIHRDIKPENLLLGSAGELKIADFGWS------VHAPSSRRXXLXGTLDYLPPEM 182
Query: 587 TEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
E G +K D++S GV+ E L GK P
Sbjct: 183 IE-------------GRMHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 95/221 (42%), Gaps = 39/221 (17%)
Query: 415 LGKSGLGIVY-------KVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVK 467
LGK G VY K +L + + G E + R EV+ + ++HPNI++
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR---EVEIQSHLRHPNILR 77
Query: 468 LRAYYWAPDEKLLISDFISNGNLANALRGRNG-QPSTSLSWSTRLRIAKGTARGLAYLHE 526
L Y+ LI ++ G + L+ + + ++ T L A L+Y
Sbjct: 78 LYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITEL------ANALSY--- 128
Query: 527 CSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQ 586
C ++ +H DIKP N+LL + + I+DFG S + PSS + G L Y+ P
Sbjct: 129 CHSKRVIHRDIKPENLLLGSAGELKIADFGWS------VHAPSSRRTTLCGTLDYLPPEM 182
Query: 587 TEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
E G +K D++S GV+ E L GK P
Sbjct: 183 IE-------------GRMHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 103/224 (45%), Gaps = 28/224 (12%)
Query: 415 LGKSGLGIV----YKVVLGN-GIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLR 469
LGK G V Y + N G VAV++L E+ R+F E++ + ++H NIVK +
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 470 AYYWAPDEK--LLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHEC 527
++ + LI +++ G+L + L+ + + L+ +G+ YL
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ----KHKERIDHIKLLQYTSQICKGMEYL--- 130
Query: 528 SPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQT 587
++++H D+ NIL++N+ + I DFGL++++ F P P+
Sbjct: 131 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVL-------PQDKEFFKVKEPGESPI-- 181
Query: 588 EKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSP 631
+ APE+ + DV+SFGVVL EL T SP
Sbjct: 182 ----FWYAPESLTESKFSVAS-DVWSFGVVLYELFTYIEKSKSP 220
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 130/314 (41%), Gaps = 69/314 (21%)
Query: 414 VLGKSGLGIVYKVVL---GNGIPVAVRRLGE-GGEQRHREFVTEVQAIAKV-KHPNIVKL 468
V+G+ G V K + G + A++R+ E + HR+F E++ + K+ HPNI+ L
Sbjct: 29 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINL 88
Query: 469 ------RAYYWAPDEKLLISDFISNGNLANALRGRN-----------GQPSTSLSWSTRL 511
R Y + L ++ +GNL + LR +++LS L
Sbjct: 89 LGACEHRGYLY------LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLL 142
Query: 512 RIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSS 571
A ARG+ YL S ++F+H ++ NIL+ ++ I+DFGLSR
Sbjct: 143 HFAADVARGMDYL---SQKQFIHRNLAARNILVGENYVAKIADFGLSR------------ 187
Query: 572 GGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSP 631
G Y+K + A E+ + + DV+S+GV+L E+++ L
Sbjct: 188 -----GQEVYVKKTMGRLPVRWMAIES-LNYSVYTTNSDVWSYGVLLWEIVS-----LGG 236
Query: 632 TTSTSIEVPDLVRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEV 691
T + +L + +G+ E PL+ E V+ L C P
Sbjct: 237 TPYCGMTCAELYEKLPQGYRLEKPLN------------CDDE---VYDLMRQCWREKPYE 281
Query: 692 RPRMKNVSENLERI 705
RP + +L R+
Sbjct: 282 RPSFAQILVSLNRM 295
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 95/221 (42%), Gaps = 39/221 (17%)
Query: 415 LGKSGLGIVY-------KVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVK 467
LGK G VY K +L + + G E + R EV+ + ++HPNI++
Sbjct: 16 LGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRR---EVEIQSHLRHPNILR 72
Query: 468 LRAYYWAPDEKLLISDFISNGNLANALRGRNG-QPSTSLSWSTRLRIAKGTARGLAYLHE 526
L Y+ LI ++ G + L+ + + ++ T L A L+Y
Sbjct: 73 LYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSY--- 123
Query: 527 CSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQ 586
C +K +H DIKP N+LL + + I+DFG S + PSS + G L Y+ P
Sbjct: 124 CHSKKVIHRDIKPENLLLGSAGELKIADFGWS------VHAPSSRRAALCGTLDYLPPEM 177
Query: 587 TEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
E G +K D++S GV+ E L GK P
Sbjct: 178 IE-------------GRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 122/311 (39%), Gaps = 79/311 (25%)
Query: 395 AIDKGFTFELDELLRASAYVLGKSGLGIVYKVVLG-NGIPVAVRRLGEGGEQRHREFVTE 453
+DK F + E+ ++G G G V+K +G +RR+ E+ RE
Sbjct: 5 TVDKRFGMDFKEI-----ELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAERE---- 55
Query: 454 VQAIAKVKHPNIVKLR----AYYWAP---DEKLLISD----------------------F 484
V+A+AK+ H NIV + + P D+ L SD F
Sbjct: 56 VKALAKLDHVNIVHYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEF 115
Query: 485 ISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILL 544
G L + R G+ L L + + +G+ Y+H +K +H D+KPSNI L
Sbjct: 116 CDKGTLEQWIEKRRGEK---LDKVLALELFEQITKGVDYIH---SKKLIHRDLKPSNIFL 169
Query: 545 DNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNR 604
+ Q I DFGL + G S G L YM P Q +
Sbjct: 170 VDTKQVKIGDFGLVTSLKNDGKRTRSK-----GTLRYMSPEQ-------------ISSQD 211
Query: 605 PMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVRWVKKGFEEENPLSDMVD--- 661
++ D+Y+ G++L ELL T+ E ++ G +SD+ D
Sbjct: 212 YGKEVDLYALGLILAELL--------HVCDTAFETSKFFTDLRDGI-----ISDIFDKKE 258
Query: 662 AMLLQEVHAKK 672
LLQ++ +KK
Sbjct: 259 KTLLQKLLSKK 269
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 103/221 (46%), Gaps = 34/221 (15%)
Query: 415 LGKSGLGIVYK-----VVLGNG-IPVAVRRLGEGGEQRHR-EFVTEVQAIAKVKHPNIVK 467
LG+ G+VY+ ++ G VAV+ + E R R EF+ E + ++V+
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 468 LRAYYWAPDEKLLISDFISNGNLANALRGRN-------GQPSTSLSWSTRLRIAKGTARG 520
L L++ + +++G+L + LR G+P +L +++A A G
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQ--EMIQMAAEIADG 142
Query: 521 LAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALP 580
+AYL + +KFVH D+ N ++ +DF I DFG++R +I + GG G LP
Sbjct: 143 MAYL---NAKKFVHRDLAARNCMVAHDFTVKIGDFGMTR--DIYETDYYRKGG--KGLLP 195
Query: 581 YMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLEL 621
+ APE+ G D++SFGVVL E+
Sbjct: 196 V----------RWMAPESLKDGVFTTSS-DMWSFGVVLWEI 225
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 124/291 (42%), Gaps = 50/291 (17%)
Query: 415 LGKSGLGIVYKVVLGNGIP------VAVRRLGEGGEQRHR-EFVTEVQAIAKVKHPNIVK 467
LG+ G+VY+ V + VA++ + E R R EF+ E + + ++V+
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 79
Query: 468 LRAYYWAPDEKLLISDFISNGNLANALRG-----RNGQPSTSLSWSTRLRIAKGTARGLA 522
L L+I + ++ G+L + LR N S S +++A A G+A
Sbjct: 80 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 139
Query: 523 YLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYM 582
YL+ KFVH D+ N + DF I DFG++R +I + GG G LP
Sbjct: 140 YLN---ANKFVHRDLAARNCXVAEDFTVKIGDFGMTR--DIYETDYYRKGG--KGLLPV- 191
Query: 583 KPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDL 642
+ +PE+ G DV+SFGVVL E+ T L+ + +
Sbjct: 192 ---------RWMSPESLKDGVFTTYS-DVWSFGVVLWEIAT-----LAEQPYQGLSNEQV 236
Query: 643 VRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRP 693
+R+V +G + P D MLL+ L C + +P++RP
Sbjct: 237 LRFVMEGGLLDKP--DNCPDMLLE-------------LMRMCWQYNPKMRP 272
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 102/221 (46%), Gaps = 34/221 (15%)
Query: 415 LGKSGLGIVYK-----VVLGNG-IPVAVRRLGEGGEQRHR-EFVTEVQAIAKVKHPNIVK 467
LG+ G+VY+ ++ G VAV+ + E R R EF+ E + ++V+
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 468 LRAYYWAPDEKLLISDFISNGNLANALRGRN-------GQPSTSLSWSTRLRIAKGTARG 520
L L++ + +++G+L + LR G+P +L +++A A G
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQ--EMIQMAAEIADG 142
Query: 521 LAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALP 580
+AYL + +KFVH D+ N ++ +DF I DFG++R I T G +
Sbjct: 143 MAYL---NAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLL----- 194
Query: 581 YMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLEL 621
PV+ + APE+ G D++SFGVVL E+
Sbjct: 195 ---PVR------WMAPESLKDGVFTTSS-DMWSFGVVLWEI 225
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 95/221 (42%), Gaps = 39/221 (17%)
Query: 415 LGKSGLGIVY-------KVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVK 467
LGK G VY K +L + + G E + R EV+ + ++HPNI++
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR---EVEIQSHLRHPNILR 73
Query: 468 LRAYYWAPDEKLLISDFISNGNLANALRGRNG-QPSTSLSWSTRLRIAKGTARGLAYLHE 526
L Y+ LI ++ G + L+ + + ++ T L A L+Y
Sbjct: 74 LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSY--- 124
Query: 527 CSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQ 586
C ++ +H DIKP N+LL + + I+DFG S + PSS + G L Y+ P
Sbjct: 125 CHSKRVIHRDIKPENLLLGSAGELKIADFGWS------CHAPSSRRTTLSGTLDYLPPEM 178
Query: 587 TEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
E G +K D++S GV+ E L GK P
Sbjct: 179 IE-------------GRMHDEKVDLWSLGVLCYEFLVGKPP 206
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 106/227 (46%), Gaps = 40/227 (17%)
Query: 415 LGKSGLGIVYK-VVLGNGIPVAVRRLGEG---GE----QRHREFVTEVQAIAKVKHPNIV 466
+GK G G+V+K ++ + VA++ L G GE ++ +EF EV ++ + HPNIV
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 467 KLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHE 526
KL P ++ +F+ G+L + L + + + WS +LR+ A G+ Y+
Sbjct: 87 KLYGLMHNPPR--MVMEFVPCGDLYHRLLDK----AHPIKWSVKLRLMLDIALGIEYMQN 140
Query: 527 CSPRKFVHGDIKPSNILLD--NDFQPY---ISDFGLSRLINITGNNPSSSGGFMGGALPY 581
+P VH D++ NI L ++ P ++DFG S+ + S G +G
Sbjct: 141 QNP-PIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ------QSVHSVSGLLGNF--- 190
Query: 582 MKPVQTEKTNNYRAPEAR-VPGNRPMQKWDVYSFGVVLLELLTGKSP 627
+ APE +K D YSF ++L +LTG+ P
Sbjct: 191 ----------QWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGP 227
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 106/227 (46%), Gaps = 40/227 (17%)
Query: 415 LGKSGLGIVYK-VVLGNGIPVAVRRLGEG---GE----QRHREFVTEVQAIAKVKHPNIV 466
+GK G G+V+K ++ + VA++ L G GE ++ +EF EV ++ + HPNIV
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 467 KLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHE 526
KL P ++ +F+ G+L + L + + + WS +LR+ A G+ Y+
Sbjct: 87 KLYGLMHNPPR--MVMEFVPCGDLYHRLLDK----AHPIKWSVKLRLMLDIALGIEYMQN 140
Query: 527 CSPRKFVHGDIKPSNILLD--NDFQPY---ISDFGLSRLINITGNNPSSSGGFMGGALPY 581
+P VH D++ NI L ++ P ++DF LS+ + S G +G
Sbjct: 141 QNP-PIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ------QSVHSVSGLLGNF--- 190
Query: 582 MKPVQTEKTNNYRAPEAR-VPGNRPMQKWDVYSFGVVLLELLTGKSP 627
+ APE +K D YSF ++L +LTG+ P
Sbjct: 191 ----------QWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGP 227
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 95/221 (42%), Gaps = 39/221 (17%)
Query: 415 LGKSGLGIVY-------KVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVK 467
LGK G VY K +L + + G E + R EV+ + ++HPNI++
Sbjct: 33 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR---EVEIQSHLRHPNILR 89
Query: 468 LRAYYWAPDEKLLISDFISNGNLANALRGRNG-QPSTSLSWSTRLRIAKGTARGLAYLHE 526
L Y+ LI ++ G + L+ + + ++ T L A L+Y
Sbjct: 90 LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSY--- 140
Query: 527 CSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQ 586
C ++ +H DIKP N+LL + + I+DFG S + PSS + G L Y+ P
Sbjct: 141 CHSKRVIHRDIKPENLLLGSAGELKIADFGWS------VHAPSSRRTTLCGTLDYLPPEM 194
Query: 587 TEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
E G +K D++S GV+ E L GK P
Sbjct: 195 IE-------------GRMHDEKVDLWSLGVLCYEFLVGKPP 222
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 95/221 (42%), Gaps = 39/221 (17%)
Query: 415 LGKSGLGIVY-------KVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVK 467
LGK G VY K +L + + G E + R EV+ + ++HPNI++
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR---EVEIQSHLRHPNILR 74
Query: 468 LRAYYWAPDEKLLISDFISNGNLANALRGRNG-QPSTSLSWSTRLRIAKGTARGLAYLHE 526
L Y+ LI ++ G + L+ + + ++ T L A L+Y
Sbjct: 75 LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSY--- 125
Query: 527 CSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQ 586
C ++ +H DIKP N+LL + + I+DFG S + PSS + G L Y+ P
Sbjct: 126 CHSKRVIHRDIKPENLLLGSAGELKIADFGWS------VHAPSSRRXXLCGTLDYLPPEM 179
Query: 587 TEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
E G +K D++S GV+ E L GK P
Sbjct: 180 IE-------------GRMHDEKVDLWSLGVLCYEFLVGKPP 207
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 95/221 (42%), Gaps = 39/221 (17%)
Query: 415 LGKSGLGIVY-------KVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVK 467
LGK G VY K +L + + G E + R EV+ + ++HPNI++
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR---EVEIQSHLRHPNILR 75
Query: 468 LRAYYWAPDEKLLISDFISNGNLANALRGRNG-QPSTSLSWSTRLRIAKGTARGLAYLHE 526
L Y+ LI ++ G + L+ + + ++ T L A L+Y
Sbjct: 76 LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSY--- 126
Query: 527 CSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQ 586
C ++ +H DIKP N+LL + + I+DFG S + PSS + G L Y+ P
Sbjct: 127 CHSKRVIHRDIKPENLLLGSAGELKIADFGWS------VHAPSSRRAALCGTLDYLPPEM 180
Query: 587 TEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
E G +K D++S GV+ E L GK P
Sbjct: 181 IE-------------GRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 103/221 (46%), Gaps = 34/221 (15%)
Query: 415 LGKSGLGIVYK-----VVLGNG-IPVAVRRLGEGGEQRHR-EFVTEVQAIAKVKHPNIVK 467
LG+ G+VY+ ++ G VAV+ + E R R EF+ E + ++V+
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 83
Query: 468 LRAYYWAPDEKLLISDFISNGNLANALRGRN-------GQPSTSLSWSTRLRIAKGTARG 520
L L++ + +++G+L + LR G+P +L +++A A G
Sbjct: 84 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQ--EMIQMAAEIADG 141
Query: 521 LAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALP 580
+AYL + +KFVH D+ N ++ +DF I DFG++R +I + GG G LP
Sbjct: 142 MAYL---NAKKFVHRDLAARNCMVAHDFTVKIGDFGMTR--DIYETDYYRKGG--KGLLP 194
Query: 581 YMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLEL 621
+ APE+ G D++SFGVVL E+
Sbjct: 195 V----------RWMAPESLKDGVFTTSS-DMWSFGVVLWEI 224
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 114/282 (40%), Gaps = 50/282 (17%)
Query: 429 GNGIPVAVRRLGEG-GEQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEK--LLISDFI 485
G G VAV+ L EG G Q + E++ + + H +IVK + EK L+ +++
Sbjct: 35 GTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYV 94
Query: 486 SNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLD 545
G+L + L P + + L A+ G+AYLH + ++H + N+LLD
Sbjct: 95 PLGSLRDYL------PRHCVGLAQLLLFAQQICEGMAYLH---AQHYIHRALAARNVLLD 145
Query: 546 NDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRP 605
ND I DFGL++ + G+ + + P ++ Y A
Sbjct: 146 NDRLVKIGDFGLAKAVP-EGHEYYRVREDGDSPVFWYAPECLKECKFYYAS--------- 195
Query: 606 MQKWDVYSFGVVLLELLT---------GKSPELSPTTSTSIEVPDLVRWVKKGFEEENPL 656
DV+SFGV L ELLT K EL T + V L +++G E P
Sbjct: 196 ----DVWSFGVTLYELLTYCDSNQSPHTKFTELIGHTQGQMTVLRLTELLERG--ERLPR 249
Query: 657 SDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNV 698
D ++HL C E + RP +N+
Sbjct: 250 PDRCPC-------------EIYHLMKNCWETEASFRPTFQNL 278
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 95/221 (42%), Gaps = 39/221 (17%)
Query: 415 LGKSGLGIVY-------KVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVK 467
LGK G VY K +L + + G E + R EV+ + ++HPNI++
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR---EVEIQSHLRHPNILR 75
Query: 468 LRAYYWAPDEKLLISDFISNGNLANALRGRNG-QPSTSLSWSTRLRIAKGTARGLAYLHE 526
L Y+ LI ++ G + L+ + + ++ T L A L+Y
Sbjct: 76 LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSY--- 126
Query: 527 CSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQ 586
C ++ +H DIKP N+LL + + I+DFG S + PSS + G L Y+ P
Sbjct: 127 CHSKRVIHRDIKPENLLLGSAGELKIADFGWS------VHAPSSRRTTLCGTLDYLPPEM 180
Query: 587 TEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
E G +K D++S GV+ E L GK P
Sbjct: 181 IE-------------GRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 95/221 (42%), Gaps = 39/221 (17%)
Query: 415 LGKSGLGIVY-------KVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVK 467
LGK G VY K +L + + G E + R EV+ + ++HPNI++
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR---EVEIQSHLRHPNILR 72
Query: 468 LRAYYWAPDEKLLISDFISNGNLANALRGRNG-QPSTSLSWSTRLRIAKGTARGLAYLHE 526
L Y+ LI ++ G + L+ + + ++ T L A L+Y
Sbjct: 73 LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSY--- 123
Query: 527 CSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQ 586
C ++ +H DIKP N+LL + + I+DFG S + PSS + G L Y+ P
Sbjct: 124 CHSKRVIHRDIKPENLLLGSAGELKIADFGWS------VHAPSSRRAALCGTLDYLPPEM 177
Query: 587 TEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
E G +K D++S GV+ E L GK P
Sbjct: 178 IE-------------GRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 114/282 (40%), Gaps = 50/282 (17%)
Query: 429 GNGIPVAVRRLGEG-GEQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEK--LLISDFI 485
G G VAV+ L EG G Q + E++ + + H +IVK + EK L+ +++
Sbjct: 36 GTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYV 95
Query: 486 SNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLD 545
G+L + L P + + L A+ G+AYLH + ++H + N+LLD
Sbjct: 96 PLGSLRDYL------PRHCVGLAQLLLFAQQICEGMAYLH---AQHYIHRALAARNVLLD 146
Query: 546 NDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRP 605
ND I DFGL++ + G+ + + P ++ Y A
Sbjct: 147 NDRLVKIGDFGLAKAVP-EGHEYYRVREDGDSPVFWYAPECLKECKFYYAS--------- 196
Query: 606 MQKWDVYSFGVVLLELLT---------GKSPELSPTTSTSIEVPDLVRWVKKGFEEENPL 656
DV+SFGV L ELLT K EL T + V L +++G E P
Sbjct: 197 ----DVWSFGVTLYELLTYCDSNQSPHTKFTELIGHTQGQMTVLRLTELLERG--ERLPR 250
Query: 657 SDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNV 698
D ++HL C E + RP +N+
Sbjct: 251 PDRCPC-------------EIYHLMKNCWETEASFRPTFQNL 279
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 95/221 (42%), Gaps = 39/221 (17%)
Query: 415 LGKSGLGIVY-------KVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVK 467
LGK G VY K +L + + G E + R EV+ + ++HPNI++
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR---EVEIQSHLRHPNILR 73
Query: 468 LRAYYWAPDEKLLISDFISNGNLANALRGRNG-QPSTSLSWSTRLRIAKGTARGLAYLHE 526
L Y+ LI ++ G + L+ + + ++ T L A L+Y
Sbjct: 74 LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSY--- 124
Query: 527 CSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQ 586
C ++ +H DIKP N+LL + + I+DFG S + PSS + G L Y+ P
Sbjct: 125 CHSKRVIHRDIKPENLLLGSAGELKIADFGWS------VHAPSSRRDTLCGTLDYLPPEM 178
Query: 587 TEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
E G +K D++S GV+ E L GK P
Sbjct: 179 IE-------------GRMHDEKVDLWSLGVLCYEFLVGKPP 206
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 95/221 (42%), Gaps = 39/221 (17%)
Query: 415 LGKSGLGIVY-------KVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVK 467
LGK G VY K +L + + G E + R EV+ + ++HPNI++
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR---EVEIQSHLRHPNILR 77
Query: 468 LRAYYWAPDEKLLISDFISNGNLANALRGRNG-QPSTSLSWSTRLRIAKGTARGLAYLHE 526
L Y+ LI ++ G + L+ + + ++ T L A L+Y
Sbjct: 78 LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSY--- 128
Query: 527 CSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQ 586
C ++ +H DIKP N+LL + + I+DFG S + PSS + G L Y+ P
Sbjct: 129 CHSKRVIHRDIKPENLLLGSAGELKIADFGWS------VHAPSSRRTTLCGTLDYLPPEX 182
Query: 587 TEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
E G +K D++S GV+ E L GK P
Sbjct: 183 IE-------------GRXHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 111/254 (43%), Gaps = 44/254 (17%)
Query: 384 VESGKGEGELVAIDKGFTFELDELLRASAYVLGKSGLGIVYK-VVLGNGIPVAVRRLGEG 442
E G E +L+ D +E DE VLGK GIVY L N + +A++ + E
Sbjct: 5 TEEGDCESDLLEYD----YEYDE--NGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPER 58
Query: 443 GEQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISN---GNLANALRGRNG 499
+ + E+ +KH NIV+ Y + E I F+ G+L+ LR + G
Sbjct: 59 DSRYSQPLHEEIALHKHLKHKNIVQ---YLGSFSENGFIKIFMEQVPGGSLSALLRSKWG 115
Query: 500 ---QPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPY--ISD 554
++ + T K GL YLH+ + VH DIK N+L+ N + ISD
Sbjct: 116 PLKDNEQTIGFYT-----KQILEGLKYLHD---NQIVHRDIKGDNVLI-NTYSGVLKISD 166
Query: 555 FGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKW-DVYS 613
FG S+ + G NP + G L YM APE G R K D++S
Sbjct: 167 FGTSK--RLAGINPCTET--FTGTLQYM------------APEIIDKGPRGYGKAADIWS 210
Query: 614 FGVVLLELLTGKSP 627
G ++E+ TGK P
Sbjct: 211 LGCTIIEMATGKPP 224
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 95/221 (42%), Gaps = 39/221 (17%)
Query: 415 LGKSGLGIVY-------KVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVK 467
LGK G VY K +L + + G E + R EV+ + ++HPNI++
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR---EVEIQSHLRHPNILR 77
Query: 468 LRAYYWAPDEKLLISDFISNGNLANALRGRNG-QPSTSLSWSTRLRIAKGTARGLAYLHE 526
L Y+ LI ++ G + L+ + + ++ T L A L+Y
Sbjct: 78 LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSY--- 128
Query: 527 CSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQ 586
C ++ +H DIKP N+LL + + I+DFG S + PSS + G L Y+ P
Sbjct: 129 CHSKRVIHRDIKPENLLLGSAGELKIADFGWS------VHAPSSRRTTLCGTLDYLPPEM 182
Query: 587 TEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
E G +K D++S GV+ E L GK P
Sbjct: 183 IE-------------GRMHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 95/221 (42%), Gaps = 39/221 (17%)
Query: 415 LGKSGLGIVY-------KVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVK 467
LGK G VY K +L + + G E + R EV+ + ++HPNI++
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR---EVEIQSHLRHPNILR 98
Query: 468 LRAYYWAPDEKLLISDFISNGNLANALRGRNG-QPSTSLSWSTRLRIAKGTARGLAYLHE 526
L Y+ LI ++ G + L+ + + ++ T L A L+Y
Sbjct: 99 LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSY--- 149
Query: 527 CSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQ 586
C ++ +H DIKP N+LL + + I+DFG S + PSS + G L Y+ P
Sbjct: 150 CHSKRVIHRDIKPENLLLGSAGELKIADFGWS------VHAPSSRRTTLCGTLDYLPPEM 203
Query: 587 TEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
E G +K D++S GV+ E L GK P
Sbjct: 204 IE-------------GRMHDEKVDLWSLGVLCYEFLVGKPP 231
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 95/221 (42%), Gaps = 39/221 (17%)
Query: 415 LGKSGLGIVY-------KVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVK 467
LGK G VY K +L + + G E + R EV+ + ++HPNI++
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR---EVEIQSHLRHPNILR 72
Query: 468 LRAYYWAPDEKLLISDFISNGNLANALRGRNG-QPSTSLSWSTRLRIAKGTARGLAYLHE 526
L Y+ LI ++ G + L+ + + ++ T L A L+Y
Sbjct: 73 LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSY--- 123
Query: 527 CSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQ 586
C ++ +H DIKP N+LL + + I+DFG S + PSS + G L Y+ P
Sbjct: 124 CHSKRVIHRDIKPENLLLGSAGELKIADFGWS------VHAPSSRRTTLCGTLDYLPPEM 177
Query: 587 TEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
E G +K D++S GV+ E L GK P
Sbjct: 178 IE-------------GRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 95/221 (42%), Gaps = 39/221 (17%)
Query: 415 LGKSGLGIVY-------KVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVK 467
LGK G VY K +L + + G E + R EV+ + ++HPNI++
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR---EVEIQSHLRHPNILR 75
Query: 468 LRAYYWAPDEKLLISDFISNGNLANALRGRNG-QPSTSLSWSTRLRIAKGTARGLAYLHE 526
L Y+ LI ++ G + L+ + + ++ T L A L+Y
Sbjct: 76 LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSY--- 126
Query: 527 CSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQ 586
C ++ +H DIKP N+LL + + I+DFG S + PSS + G L Y+ P
Sbjct: 127 CHSKRVIHRDIKPENLLLGSAGELKIADFGWS------VHAPSSRRXXLCGTLDYLPPEM 180
Query: 587 TEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
E G +K D++S GV+ E L GK P
Sbjct: 181 IE-------------GRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 95/221 (42%), Gaps = 39/221 (17%)
Query: 415 LGKSGLGIVY-------KVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVK 467
LGK G VY K +L + + G E + R EV+ + ++HPNI++
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR---EVEIQSHLRHPNILR 75
Query: 468 LRAYYWAPDEKLLISDFISNGNLANALRGRNG-QPSTSLSWSTRLRIAKGTARGLAYLHE 526
L Y+ LI ++ G + L+ + + ++ T L A L+Y
Sbjct: 76 LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSY--- 126
Query: 527 CSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQ 586
C ++ +H DIKP N+LL + + I+DFG S + PSS + G L Y+ P
Sbjct: 127 CHSKRVIHRDIKPENLLLGSAGELKIADFGWS------VHAPSSRRTTLCGTLDYLPPEM 180
Query: 587 TEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
E G +K D++S GV+ E L GK P
Sbjct: 181 IE-------------GRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 126/280 (45%), Gaps = 44/280 (15%)
Query: 406 ELLRASAYVLGKSGLGIVYKVVLG---NGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKH 462
E+ R S ++ K G G +V +G N VAV+ L + G + F+ E + ++H
Sbjct: 8 EIPRESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTL-KPGTMSVQAFLEEANLMKTLQH 66
Query: 463 PNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLA 522
+V+L A + +I++F++ G+L + L+ G + + + A G+A
Sbjct: 67 DKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEG---GKVLLPKLIDFSAQIAEGMA 123
Query: 523 YLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYM 582
Y+ + ++H D++ +N+L+ I+DFGL+R+I F
Sbjct: 124 YIER---KNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKF-------- 172
Query: 583 KPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTSI---- 637
P++ + APEA G ++ +V+SFG++L E++T GK P T + +
Sbjct: 173 -PIK------WTAPEAINFGCFTIKS-NVWSFGILLYEIVTYGKIPYPGRTNADVMSALS 224
Query: 638 -------------EVPDLVRWVKKGFEEENPLSDMVDAML 664
E+ D+++ K EE P D + ++L
Sbjct: 225 QGYRMPRMENCPDELYDIMKMCWKEKAEERPTFDYLQSVL 264
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 95/221 (42%), Gaps = 39/221 (17%)
Query: 415 LGKSGLGIVY-------KVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVK 467
LGK G VY K +L + + G E + R EV+ + ++HPNI++
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR---EVEIQSHLRHPNILR 72
Query: 468 LRAYYWAPDEKLLISDFISNGNLANALRGRNG-QPSTSLSWSTRLRIAKGTARGLAYLHE 526
L Y+ LI ++ G + L+ + + ++ T L A L+Y
Sbjct: 73 LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSY--- 123
Query: 527 CSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQ 586
C ++ +H DIKP N+LL + + I+DFG S + PSS + G L Y+ P
Sbjct: 124 CHSKRVIHRDIKPENLLLGSAGELKIADFGWS------VHAPSSRRTXLCGTLDYLPPEM 177
Query: 587 TEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
E G +K D++S GV+ E L GK P
Sbjct: 178 IE-------------GRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 118/268 (44%), Gaps = 41/268 (15%)
Query: 415 LGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWA 474
LG G V+ N VAV+ L + G + F+ E + ++H +V+L A
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTL-KPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTR 79
Query: 475 PDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVH 534
+ +I+++++ G+L + L+ G + + + A G+AY+ + ++H
Sbjct: 80 EEPIYIITEYMAKGSLLDFLKSDEG---GKVLLPKLIDFSAQIAEGMAYIER---KNYIH 133
Query: 535 GDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYR 594
D++ +N+L+ I+DFGL+R+I F P++ +
Sbjct: 134 RDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKF---------PIK------WT 178
Query: 595 APEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTSI---------------- 637
APEA G ++ DV+SFG++L E++T GK P T + +
Sbjct: 179 APEAINFGCFTIKS-DVWSFGILLYEIVTYGKIPYPGRTNADVMTALSQGYRMPRVENCP 237
Query: 638 -EVPDLVRWVKKGFEEENPLSDMVDAML 664
E+ D+++ K EE P D + ++L
Sbjct: 238 DELYDIMKMCWKEKAEERPTFDYLQSVL 265
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 95/221 (42%), Gaps = 39/221 (17%)
Query: 415 LGKSGLGIVY-------KVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVK 467
LGK G VY K +L + + G E + R EV+ + ++HPNI++
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR---EVEIQSHLRHPNILR 72
Query: 468 LRAYYWAPDEKLLISDFISNGNLANALRGRNG-QPSTSLSWSTRLRIAKGTARGLAYLHE 526
L Y+ LI ++ G + L+ + + ++ T L A L+Y
Sbjct: 73 LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSY--- 123
Query: 527 CSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQ 586
C ++ +H DIKP N+LL + + I+DFG S + PSS + G L Y+ P
Sbjct: 124 CHSKRVIHRDIKPENLLLGSAGELKIADFGWS------VHAPSSRRXXLCGTLDYLPPEM 177
Query: 587 TEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
E G +K D++S GV+ E L GK P
Sbjct: 178 IE-------------GRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 95/221 (42%), Gaps = 39/221 (17%)
Query: 415 LGKSGLGIVY-------KVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVK 467
LGK G VY K +L + + G E + R EV+ + ++HPNI++
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR---EVEIQSHLRHPNILR 72
Query: 468 LRAYYWAPDEKLLISDFISNGNLANALRGRNG-QPSTSLSWSTRLRIAKGTARGLAYLHE 526
L Y+ LI ++ G + L+ + + ++ T L A L+Y
Sbjct: 73 LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSY--- 123
Query: 527 CSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQ 586
C ++ +H DIKP N+LL + + I+DFG S + PSS + G L Y+ P
Sbjct: 124 CHSKRVIHRDIKPENLLLGSAGELKIADFGWS------VHAPSSRRTELCGTLDYLPPEM 177
Query: 587 TEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
E G +K D++S GV+ E L GK P
Sbjct: 178 IE-------------GRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 95/221 (42%), Gaps = 39/221 (17%)
Query: 415 LGKSGLGIVY-------KVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVK 467
LGK G VY K +L + + G E + R EV+ + ++HPNI++
Sbjct: 13 LGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRR---EVEIQSHLRHPNILR 69
Query: 468 LRAYYWAPDEKLLISDFISNGNLANALRGRNG-QPSTSLSWSTRLRIAKGTARGLAYLHE 526
L Y+ LI ++ G + L+ + + ++ T L A L+Y
Sbjct: 70 LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSY--- 120
Query: 527 CSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQ 586
C ++ +H DIKP N+LL + + I+DFG S + PSS + G L Y+ P
Sbjct: 121 CHSKRVIHRDIKPENLLLGSAGELKIADFGWS------VHAPSSRRTTLCGTLDYLPPEM 174
Query: 587 TEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
E G +K D++S GV+ E L GK P
Sbjct: 175 IE-------------GRMHDEKVDLWSLGVLCYEFLVGKPP 202
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 105/250 (42%), Gaps = 46/250 (18%)
Query: 405 DELLRASAYVLGKS-GLGIVYKVVLG----NGIPVAVRRLGEGGEQRHR------EFVTE 453
D ++ YVLG + G+G KV +G G VAV+ L Q+ R + E
Sbjct: 5 DGRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNR---QKIRSLDVVGKIKRE 61
Query: 454 VQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANAL--RGRNGQPSTSLSWSTRL 511
+Q + +HP+I+KL P + ++ +++S G L + + GR +
Sbjct: 62 IQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEAR------- 114
Query: 512 RIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSS 571
R+ + + Y C VH D+KP N+LLD I+DFGLS N S
Sbjct: 115 RLFQQILSAVDY---CHRHMVVHRDLKPENVLLDAHMNAKIADFGLS--------NMMSD 163
Query: 572 GGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP---E 628
G F+ + + NY APE + D++S GV+L LL G P E
Sbjct: 164 GEFLRDSC---------GSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDE 214
Query: 629 LSPTTSTSIE 638
PT I
Sbjct: 215 HVPTLFKKIR 224
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 95/221 (42%), Gaps = 39/221 (17%)
Query: 415 LGKSGLGIVY-------KVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVK 467
LGK G VY K +L + + G E + R EV+ + ++HPNI++
Sbjct: 15 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR---EVEIQSHLRHPNILR 71
Query: 468 LRAYYWAPDEKLLISDFISNGNLANALRGRNG-QPSTSLSWSTRLRIAKGTARGLAYLHE 526
L Y+ LI ++ G + L+ + + ++ T L A L+Y
Sbjct: 72 LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSY--- 122
Query: 527 CSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQ 586
C ++ +H DIKP N+LL + + I+DFG S + PSS + G L Y+ P
Sbjct: 123 CHSKRVIHRDIKPENLLLGSAGELKIADFGWS------VHAPSSRRTTLCGTLDYLPPEM 176
Query: 587 TEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
E G +K D++S GV+ E L GK P
Sbjct: 177 IE-------------GRMHDEKVDLWSLGVLCYEFLVGKPP 204
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 90/220 (40%), Gaps = 37/220 (16%)
Query: 415 LGKSGLGIVY-------KVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVK 467
LGK G VY K +L + + G E + R EV+ + ++HPNI++
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR---EVEIQSHLRHPNILR 98
Query: 468 LRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHEC 527
L Y+ LI ++ G + L+ LS R A L C
Sbjct: 99 LYGYFHDATRVYLILEYAPLGTVYRELQ--------KLSKFDEQRTATYITELANALSYC 150
Query: 528 SPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQT 587
++ +H DIKP N+LL + + I+DFG S + PSS + G L Y+ P
Sbjct: 151 HSKRVIHRDIKPENLLLGSAGELKIADFGWS------VHAPSSRRDDLCGTLDYLPPEMI 204
Query: 588 EKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
E G +K D++S GV+ E L GK P
Sbjct: 205 E-------------GRMHDEKVDLWSLGVLCYEFLVGKPP 231
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 95/221 (42%), Gaps = 39/221 (17%)
Query: 415 LGKSGLGIVY-------KVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVK 467
LGK G VY K +L + + G E + R EV+ + ++HPNI++
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR---EVEIQSHLRHPNILR 72
Query: 468 LRAYYWAPDEKLLISDFISNGNLANALRGRNG-QPSTSLSWSTRLRIAKGTARGLAYLHE 526
L Y+ LI ++ G + L+ + + ++ T L A L+Y
Sbjct: 73 LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSY--- 123
Query: 527 CSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQ 586
C ++ +H DIKP N+LL + + I+DFG S + PSS + G L Y+ P
Sbjct: 124 CHSKRVIHRDIKPENLLLGSAGELKIADFGWS------VHAPSSRRTDLCGTLDYLPPEM 177
Query: 587 TEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
E G +K D++S GV+ E L GK P
Sbjct: 178 IE-------------GRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 95/221 (42%), Gaps = 39/221 (17%)
Query: 415 LGKSGLGIVY-------KVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVK 467
LGK G VY K +L + + G E + R EV+ + ++HPNI++
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR---EVEIQSHLRHPNILR 73
Query: 468 LRAYYWAPDEKLLISDFISNGNLANALRGRNG-QPSTSLSWSTRLRIAKGTARGLAYLHE 526
L Y+ LI ++ G + L+ + + ++ T L A L+Y
Sbjct: 74 LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSY--- 124
Query: 527 CSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQ 586
C ++ +H DIKP N+LL + + I+DFG S + PSS + G L Y+ P
Sbjct: 125 CHSKRVIHRDIKPENLLLGSAGELKIADFGWS------VHAPSSRRTDLCGTLDYLPPEM 178
Query: 587 TEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
E G +K D++S GV+ E L GK P
Sbjct: 179 IE-------------GRMHDEKVDLWSLGVLCYEFLVGKPP 206
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 95/221 (42%), Gaps = 39/221 (17%)
Query: 415 LGKSGLGIVY-------KVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVK 467
LGK G VY K +L + + G E + R EV+ + ++HPNI++
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR---EVEIQSHLRHPNILR 72
Query: 468 LRAYYWAPDEKLLISDFISNGNLANALRGRNG-QPSTSLSWSTRLRIAKGTARGLAYLHE 526
L Y+ LI ++ G + L+ + + ++ T L A L+Y
Sbjct: 73 LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSY--- 123
Query: 527 CSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQ 586
C ++ +H DIKP N+LL + + I+DFG S + PSS + G L Y+ P
Sbjct: 124 CHSKRVIHRDIKPENLLLGSAGELKIADFGWS------VHAPSSRRTDLCGTLDYLPPEM 177
Query: 587 TEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
E G +K D++S GV+ E L GK P
Sbjct: 178 IE-------------GRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 95/221 (42%), Gaps = 39/221 (17%)
Query: 415 LGKSGLGIVY-------KVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVK 467
LGK G VY K +L + + G E + R EV+ + ++HPNI++
Sbjct: 20 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR---EVEIQSHLRHPNILR 76
Query: 468 LRAYYWAPDEKLLISDFISNGNLANALRGRNG-QPSTSLSWSTRLRIAKGTARGLAYLHE 526
L Y+ LI ++ G + L+ + + ++ T L A L+Y
Sbjct: 77 LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSY--- 127
Query: 527 CSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQ 586
C ++ +H DIKP N+LL + + I+DFG S + PSS + G L Y+ P
Sbjct: 128 CHSKRVIHRDIKPENLLLGSAGELKIADFGWS------VHAPSSRRTTLCGTLDYLPPEM 181
Query: 587 TEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
E G +K D++S GV+ E L GK P
Sbjct: 182 IE-------------GRMHDEKVDLWSLGVLCYEFLVGKPP 209
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 92/191 (48%), Gaps = 29/191 (15%)
Query: 449 EFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWS 508
+ + E+Q + + P IV +++ E + + + G+L L+ P L
Sbjct: 60 QIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILG-- 117
Query: 509 TRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLS-RLINITGNN 567
+++ RGLAYL E + +H D+KPSNIL+++ + + DFG+S +LI+ N+
Sbjct: 118 ---KVSIAVLRGLAYLRE--KHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS 172
Query: 568 PSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
F+G T +Y APE R+ G + D++S G+ L+EL G+ P
Sbjct: 173 ------FVG-------------TRSYMAPE-RLQGTHYSVQSDIWSMGLSLVELAVGRYP 212
Query: 628 ELSPTTSTSIE 638
+ P + +E
Sbjct: 213 -IPPPDAKELE 222
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 105/250 (42%), Gaps = 46/250 (18%)
Query: 405 DELLRASAYVLGKS-GLGIVYKVVLG----NGIPVAVRRLGEGGEQRHR------EFVTE 453
D ++ YVLG + G+G KV +G G VAV+ L Q+ R + E
Sbjct: 5 DGRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNR---QKIRSLDVVGKIKRE 61
Query: 454 VQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANAL--RGRNGQPSTSLSWSTRL 511
+Q + +HP+I+KL P + ++ +++S G L + + GR +
Sbjct: 62 IQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEAR------- 114
Query: 512 RIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSS 571
R+ + + Y C VH D+KP N+LLD I+DFGLS N S
Sbjct: 115 RLFQQILSAVDY---CHRHMVVHRDLKPENVLLDAHMNAKIADFGLS--------NMMSD 163
Query: 572 GGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP---E 628
G F+ + + NY APE + D++S GV+L LL G P E
Sbjct: 164 GEFLRTSC---------GSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDE 214
Query: 629 LSPTTSTSIE 638
PT I
Sbjct: 215 HVPTLFKKIR 224
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 95/221 (42%), Gaps = 39/221 (17%)
Query: 415 LGKSGLGIVY-------KVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVK 467
LGK G VY K +L + + G E + R EV+ + ++HPNI++
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR---EVEIQSHLRHPNILR 77
Query: 468 LRAYYWAPDEKLLISDFISNGNLANALRGRNG-QPSTSLSWSTRLRIAKGTARGLAYLHE 526
L Y+ LI ++ G + L+ + + ++ T L A L+Y
Sbjct: 78 LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSY--- 128
Query: 527 CSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQ 586
C ++ +H DIKP N+LL + + I+DFG S + PSS + G L Y+ P
Sbjct: 129 CHSKRVIHRDIKPENLLLGSAGELKIADFGWS------VHAPSSRRTDLCGTLDYLPPEM 182
Query: 587 TEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
E G +K D++S GV+ E L GK P
Sbjct: 183 IE-------------GRMHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 102/229 (44%), Gaps = 38/229 (16%)
Query: 415 LGKSGLGIV----YKVVLGN-GIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLR 469
LGK G V Y + N G VAV++L E+ R+F E++ + ++H NIVK +
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 470 AYYWAPDEK--LLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHEC 527
++ + LI +++ G+L + L+ + + L+ +G+ YL
Sbjct: 81 GVCYSAGRRNLKLIMEYLPYGSLRDYLQAH----AERIDHIKLLQYTSQICKGMEYL--- 133
Query: 528 SPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLI-----NITGNNPSSSGGFMGGALPYM 582
++++H D+ NIL++N+ + I DFGL++++ P S F
Sbjct: 134 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF-------- 185
Query: 583 KPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSP 631
+ APE+ + DV+SFGVVL EL T SP
Sbjct: 186 ----------WYAPESLTESKFSVAS-DVWSFGVVLYELFTYIEKSKSP 223
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 97/222 (43%), Gaps = 41/222 (18%)
Query: 415 LGKSGLGIVY-------KVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVK 467
LGK G VY K +L + + G E + R EV+ + ++HPNI++
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRR---EVEIQSHLRHPNILR 76
Query: 468 LRAYYWAPDEKLLISDFISNGNLANALR--GRNGQPSTSLSWSTRLRIAKGTARGLAYLH 525
L Y+ LI ++ G + L+ R + T+ ++ T L A L+Y
Sbjct: 77 LYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTA-TYITEL------ANALSY-- 127
Query: 526 ECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPV 585
C ++ +H DIKP N+LL ++ + I+DFG S + PSS + G L Y+ P
Sbjct: 128 -CHSKRVIHRDIKPENLLLGSNGELKIADFGWS------VHAPSSRRDTLCGTLDYLPPE 180
Query: 586 QTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
E G +K D++S GV+ E L G P
Sbjct: 181 MIE-------------GRMHDEKVDLWSLGVLCYEFLVGMPP 209
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 97/222 (43%), Gaps = 41/222 (18%)
Query: 415 LGKSGLGIVY-------KVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVK 467
LGK G VY K +L + + G E + R EV+ + ++HPNI++
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRR---EVEIQSHLRHPNILR 76
Query: 468 LRAYYWAPDEKLLISDFISNGNLANALR--GRNGQPSTSLSWSTRLRIAKGTARGLAYLH 525
L Y+ LI ++ G + L+ R + T+ ++ T L A L+Y
Sbjct: 77 LYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTA-TYITEL------ANALSY-- 127
Query: 526 ECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPV 585
C ++ +H DIKP N+LL ++ + I+DFG S + PSS + G L Y+ P
Sbjct: 128 -CHSKRVIHRDIKPENLLLGSNGELKIADFGWS------VHAPSSRRTTLCGTLDYLPPE 180
Query: 586 QTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
E G +K D++S GV+ E L G P
Sbjct: 181 MIE-------------GRMHDEKVDLWSLGVLCYEFLVGMPP 209
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 104/226 (46%), Gaps = 30/226 (13%)
Query: 415 LGKSGLGIVYKVVLGNGIPVAVRRLG--EGGEQRHREFVTEVQAIAKVKHPNIVKLRAYY 472
LG G+V+KV V R+L E + + E+Q + + P IV +
Sbjct: 33 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 92
Query: 473 WAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKF 532
++ E + + + G+L L+ P L +++ +GL YL E K
Sbjct: 93 YSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-----KVSIAVIKGLTYLRE--KHKI 145
Query: 533 VHGDIKPSNILLDNDFQPYISDFGLS-RLINITGNNPSSSGGFMGGALPYMKPVQTEKTN 591
+H D+KPSNIL+++ + + DFG+S +LI+ N+ F+G T
Sbjct: 146 MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS------FVG-------------TR 186
Query: 592 NYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSI 637
+Y +PE R+ G + D++S G+ L+E+ G+ P S + S +I
Sbjct: 187 SYMSPE-RLQGTHYSVQSDIWSMGLSLVEMAVGRYPIGSGSGSMAI 231
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 101/229 (44%), Gaps = 38/229 (16%)
Query: 415 LGKSGLGIV----YKVVLGN-GIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLR 469
LGK G V Y + N G VAV++L E+ R+F E++ + ++H NIVK +
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 470 AYYWAPDEK--LLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHEC 527
++ + LI +F+ G+L L+ + + L+ +G+ YL
Sbjct: 81 GVCYSAGRRNLKLIMEFLPYGSLREYLQ----KHKERIDHIKLLQYTSQICKGMEYL--- 133
Query: 528 SPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLI-----NITGNNPSSSGGFMGGALPYM 582
++++H D+ NIL++N+ + I DFGL++++ P S F
Sbjct: 134 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF-------- 185
Query: 583 KPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSP 631
+ APE+ + DV+SFGVVL EL T SP
Sbjct: 186 ----------WYAPESLTESKFSVAS-DVWSFGVVLYELFTYIEKSKSP 223
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 105/228 (46%), Gaps = 31/228 (13%)
Query: 415 LGKSGLGIVYKVVLGNGIPVAVRRLG--EGGEQRHREFVTEVQAIAKVKHPNIVKLRAYY 472
LG G+V+KV V R+L E + + E+Q + + P IV +
Sbjct: 41 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 100
Query: 473 WAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKF 532
++ E + + + G+L L+ P L +++ +GL YL E K
Sbjct: 101 YSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-----KVSIAVIKGLTYLRE--KHKI 153
Query: 533 VHGDIKPSNILLDNDFQPYISDFGLS-RLINITGNNPSSSGGFMGGALPYMKPVQTEKTN 591
+H D+KPSNIL+++ + + DFG+S +LI+ N+ F+G T
Sbjct: 154 MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS------FVG-------------TR 194
Query: 592 NYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEV 639
+Y +PE R+ G + D++S G+ L+E+ G+ P + P + +E+
Sbjct: 195 SYMSPE-RLQGTHYSVQSDIWSMGLSLVEMAVGRYP-IPPPDAKELEL 240
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 104/247 (42%), Gaps = 30/247 (12%)
Query: 390 EGELVAIDKGFTFELDELLRASAYVLGKSGLGIVYKVV-LGNGIPVAVRRLGEGGEQRHR 448
+G +V ID + +L G+ G V V L +G A++R+ +Q
Sbjct: 20 QGHMVIIDNKHYLFIQKL--------GEGGFSYVDLVEGLHDGHFYALKRILCHEQQDRE 71
Query: 449 EFVTEVQAIAKVKHPNIVKLRAYYW----APDEKLLISDFISNGNLANALRGRNGQPSTS 504
E E HPNI++L AY A E L+ F G L N + R
Sbjct: 72 EAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIE-RLKDKGNF 130
Query: 505 LSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGL--SRLIN 562
L+ L + G RGL +H + + H D+KP+NILL ++ QP + D G I+
Sbjct: 131 LTEDQILWLLLGICRGLEAIH---AKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIH 187
Query: 563 ITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPM--QKWDVYSFGVVLLE 620
+ G+ AL T +YRAPE + + ++ DV+S G VL
Sbjct: 188 VEGSRQ---------ALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYA 238
Query: 621 LLTGKSP 627
++ G+ P
Sbjct: 239 MMFGEGP 245
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 99/224 (44%), Gaps = 30/224 (13%)
Query: 415 LGKSGLGIVYKVV-LGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYW 473
LG G VYK + A + + E+ +++ E+ +A HPNIVKL ++
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 474 APDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFV 533
+ ++ +F + G + +A+ +P T S + K T L YLH+ K +
Sbjct: 105 YENNLWILIEFCAGGAV-DAVMLELERPLTE---SQIQVVCKQTLDALNYLHD---NKII 157
Query: 534 HGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNY 593
H D+K NIL D ++DFG+S T S F+G PY +
Sbjct: 158 HRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDS---FIGT--PY-----------W 201
Query: 594 RAPEA---RVPGNRPMQ-KWDVYSFGVVLLELLTGKSP--ELSP 631
APE +RP K DV+S G+ L+E+ + P EL+P
Sbjct: 202 MAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNP 245
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 105/228 (46%), Gaps = 31/228 (13%)
Query: 415 LGKSGLGIVYKVVLGNGIPVAVRRLG--EGGEQRHREFVTEVQAIAKVKHPNIVKLRAYY 472
LG G+V+KV V R+L E + + E+Q + + P IV +
Sbjct: 76 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 135
Query: 473 WAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKF 532
++ E + + + G+L L+ P L +++ +GL YL E K
Sbjct: 136 YSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-----KVSIAVIKGLTYLRE--KHKI 188
Query: 533 VHGDIKPSNILLDNDFQPYISDFGLS-RLINITGNNPSSSGGFMGGALPYMKPVQTEKTN 591
+H D+KPSNIL+++ + + DFG+S +LI+ N+ F+G T
Sbjct: 189 MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS------FVG-------------TR 229
Query: 592 NYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEV 639
+Y +PE R+ G + D++S G+ L+E+ G+ P + P + +E+
Sbjct: 230 SYMSPE-RLQGTHYSVQSDIWSMGLSLVEMAVGRYP-IPPPDAKELEL 275
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 105/228 (46%), Gaps = 31/228 (13%)
Query: 415 LGKSGLGIVYKVVLGNGIPVAVRRLG--EGGEQRHREFVTEVQAIAKVKHPNIVKLRAYY 472
LG G+V+KV V R+L E + + E+Q + + P IV +
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 473 WAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKF 532
++ E + + + G+L L+ P L +++ +GL YL E K
Sbjct: 74 YSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-----KVSIAVIKGLTYLRE--KHKI 126
Query: 533 VHGDIKPSNILLDNDFQPYISDFGLS-RLINITGNNPSSSGGFMGGALPYMKPVQTEKTN 591
+H D+KPSNIL+++ + + DFG+S +LI+ N+ F+G T
Sbjct: 127 MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS------FVG-------------TR 167
Query: 592 NYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEV 639
+Y +PE R+ G + D++S G+ L+E+ G+ P + P + +E+
Sbjct: 168 SYMSPE-RLQGTHYSVQSDIWSMGLSLVEMAVGRYP-IPPPDAKELEL 213
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 105/228 (46%), Gaps = 31/228 (13%)
Query: 415 LGKSGLGIVYKVVLGNGIPVAVRRLG--EGGEQRHREFVTEVQAIAKVKHPNIVKLRAYY 472
LG G+V+KV V R+L E + + E+Q + + P IV +
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 473 WAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKF 532
++ E + + + G+L L+ P L +++ +GL YL E K
Sbjct: 74 YSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-----KVSIAVIKGLTYLRE--KHKI 126
Query: 533 VHGDIKPSNILLDNDFQPYISDFGLS-RLINITGNNPSSSGGFMGGALPYMKPVQTEKTN 591
+H D+KPSNIL+++ + + DFG+S +LI+ N+ F+G T
Sbjct: 127 MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS------FVG-------------TR 167
Query: 592 NYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEV 639
+Y +PE R+ G + D++S G+ L+E+ G+ P + P + +E+
Sbjct: 168 SYMSPE-RLQGTHYSVQSDIWSMGLSLVEMAVGRYP-IPPPDAKELEL 213
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 105/228 (46%), Gaps = 31/228 (13%)
Query: 415 LGKSGLGIVYKVVLGNGIPVAVRRLG--EGGEQRHREFVTEVQAIAKVKHPNIVKLRAYY 472
LG G+V+KV V R+L E + + E+Q + + P IV +
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 473 WAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKF 532
++ E + + + G+L L+ P L +++ +GL YL E K
Sbjct: 74 YSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-----KVSIAVIKGLTYLRE--KHKI 126
Query: 533 VHGDIKPSNILLDNDFQPYISDFGLS-RLINITGNNPSSSGGFMGGALPYMKPVQTEKTN 591
+H D+KPSNIL+++ + + DFG+S +LI+ N+ F+G T
Sbjct: 127 MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS------FVG-------------TR 167
Query: 592 NYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEV 639
+Y +PE R+ G + D++S G+ L+E+ G+ P + P + +E+
Sbjct: 168 SYMSPE-RLQGTHYSVQSDIWSMGLSLVEMAVGRYP-IPPPDAKELEL 213
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 105/228 (46%), Gaps = 31/228 (13%)
Query: 415 LGKSGLGIVYKVVLGNGIPVAVRRLG--EGGEQRHREFVTEVQAIAKVKHPNIVKLRAYY 472
LG G+V+KV V R+L E + + E+Q + + P IV +
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 473 WAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKF 532
++ E + + + G+L L+ P L +++ +GL YL E K
Sbjct: 74 YSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-----KVSIAVIKGLTYLRE--KHKI 126
Query: 533 VHGDIKPSNILLDNDFQPYISDFGLS-RLINITGNNPSSSGGFMGGALPYMKPVQTEKTN 591
+H D+KPSNIL+++ + + DFG+S +LI+ N+ F+G T
Sbjct: 127 MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS------FVG-------------TR 167
Query: 592 NYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEV 639
+Y +PE R+ G + D++S G+ L+E+ G+ P + P + +E+
Sbjct: 168 SYMSPE-RLQGTHYSVQSDIWSMGLSLVEMAVGRYP-IPPPDAKELEL 213
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 95/221 (42%), Gaps = 39/221 (17%)
Query: 415 LGKSGLGIVY-------KVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVK 467
LGK G VY K +L + + G E + R EV+ + ++HPNI++
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR---EVEIQSHLRHPNILR 75
Query: 468 LRAYYWAPDEKLLISDFISNGNLANALRGRNG-QPSTSLSWSTRLRIAKGTARGLAYLHE 526
L Y+ LI ++ G + L+ + + ++ T L A L+Y
Sbjct: 76 LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSY--- 126
Query: 527 CSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQ 586
C ++ +H DIKP N+LL + + I+DFG S + PSS + G L Y+ P
Sbjct: 127 CHSKRVIHRDIKPENLLLGSAGELKIADFGWS------VHAPSSRRDDLCGTLDYLPPEM 180
Query: 587 TEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
E G +K D++S GV+ E L GK P
Sbjct: 181 IE-------------GRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 103/221 (46%), Gaps = 34/221 (15%)
Query: 415 LGKSGLGIVYK-----VVLGNG-IPVAVRRLGEGGEQRHR-EFVTEVQAIAKVKHPNIVK 467
LG+ G+VY+ ++ G VAV+ + E R R EF+ E + ++V+
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 468 LRAYYWAPDEKLLISDFISNGNLANALRGRN-------GQPSTSLSWSTRLRIAKGTARG 520
L L++ + +++G+L + LR G+P +L +++A A G
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQ--EMIQMAAEIADG 142
Query: 521 LAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALP 580
+AYL + +KFVH ++ N ++ +DF I DFG++R +I + GG G LP
Sbjct: 143 MAYL---NAKKFVHRNLAARNCMVAHDFTVKIGDFGMTR--DIYETDYYRKGG--KGLLP 195
Query: 581 YMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLEL 621
+ APE+ G D++SFGVVL E+
Sbjct: 196 V----------RWMAPESLKDGVFTTSS-DMWSFGVVLWEI 225
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 103/221 (46%), Gaps = 34/221 (15%)
Query: 415 LGKSGLGIVYK-----VVLGNG-IPVAVRRLGEGGEQRHR-EFVTEVQAIAKVKHPNIVK 467
LG+ G+VY+ ++ G VAV+ + E R R EF+ E + ++V+
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 85
Query: 468 LRAYYWAPDEKLLISDFISNGNLANALRGRN-------GQPSTSLSWSTRLRIAKGTARG 520
L L++ + +++G+L + LR G+P +L +++A A G
Sbjct: 86 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQ--EMIQMAAEIADG 143
Query: 521 LAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALP 580
+AYL + +KFVH ++ N ++ +DF I DFG++R +I + GG G LP
Sbjct: 144 MAYL---NAKKFVHRNLAARNCMVAHDFTVKIGDFGMTR--DIYETDYYRKGG--KGLLP 196
Query: 581 YMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLEL 621
+ APE+ G D++SFGVVL E+
Sbjct: 197 V----------RWMAPESLKDGVFTTSS-DMWSFGVVLWEI 226
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 102/229 (44%), Gaps = 38/229 (16%)
Query: 415 LGKSGLGIV----YKVVLGN-GIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLR 469
LGK G V Y + N G VAV++L E+ R+F E++ + ++H NIVK +
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 84
Query: 470 AYYWAPDEK--LLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHEC 527
++ + LI +++ G+L + L+ + + L+ +G+ YL
Sbjct: 85 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ----KHKERIDHIKLLQYTSQICKGMEYL--- 137
Query: 528 SPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLI-----NITGNNPSSSGGFMGGALPYM 582
++++H D+ NIL++N+ + I DFGL++++ P S F
Sbjct: 138 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF-------- 189
Query: 583 KPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSP 631
+ APE+ + DV+SFGVVL EL T SP
Sbjct: 190 ----------WYAPESLTESKFSVAS-DVWSFGVVLYELFTYIEKSKSP 227
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 102/229 (44%), Gaps = 38/229 (16%)
Query: 415 LGKSGLGIV----YKVVLGN-GIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLR 469
LGK G V Y + N G VAV++L E+ R+F E++ + ++H NIVK +
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 470 AYYWAPDEK--LLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHEC 527
++ + LI +++ G+L + L+ + + L+ +G+ YL
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ----KHKERIDHIKLLQYTSQICKGMEYL--- 130
Query: 528 SPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLI-----NITGNNPSSSGGFMGGALPYM 582
++++H D+ NIL++N+ + I DFGL++++ P S F
Sbjct: 131 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF-------- 182
Query: 583 KPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSP 631
+ APE+ + DV+SFGVVL EL T SP
Sbjct: 183 ----------WYAPESLTESKFSVAS-DVWSFGVVLYELFTYIEKSKSP 220
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 102/229 (44%), Gaps = 38/229 (16%)
Query: 415 LGKSGLGIV----YKVVLGN-GIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLR 469
LGK G V Y + N G VAV++L E+ R+F E++ + ++H NIVK +
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 470 AYYWAPDEK--LLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHEC 527
++ + LI +++ G+L + L+ + + L+ +G+ YL
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ----KHKERIDHIKLLQYTSQICKGMEYL--- 130
Query: 528 SPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLI-----NITGNNPSSSGGFMGGALPYM 582
++++H D+ NIL++N+ + I DFGL++++ P S F
Sbjct: 131 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF-------- 182
Query: 583 KPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSP 631
+ APE+ + DV+SFGVVL EL T SP
Sbjct: 183 ----------WYAPESLTESKFSVAS-DVWSFGVVLYELFTYIEKSKSP 220
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 102/229 (44%), Gaps = 38/229 (16%)
Query: 415 LGKSGLGIV----YKVVLGN-GIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLR 469
LGK G V Y + N G VAV++L E+ R+F E++ + ++H NIVK +
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 75
Query: 470 AYYWAPDEK--LLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHEC 527
++ + LI +++ G+L + L+ + + L+ +G+ YL
Sbjct: 76 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ----KHKERIDHIKLLQYTSQICKGMEYL--- 128
Query: 528 SPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLI-----NITGNNPSSSGGFMGGALPYM 582
++++H D+ NIL++N+ + I DFGL++++ P S F
Sbjct: 129 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF-------- 180
Query: 583 KPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSP 631
+ APE+ + DV+SFGVVL EL T SP
Sbjct: 181 ----------WYAPESLTESKFSVAS-DVWSFGVVLYELFTYIEKSKSP 218
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 102/229 (44%), Gaps = 38/229 (16%)
Query: 415 LGKSGLGIV----YKVVLGN-GIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLR 469
LGK G V Y + N G VAV++L E+ R+F E++ + ++H NIVK +
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 82
Query: 470 AYYWAPDEK--LLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHEC 527
++ + LI +++ G+L + L+ + + L+ +G+ YL
Sbjct: 83 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ----KHKERIDHIKLLQYTSQICKGMEYL--- 135
Query: 528 SPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLI-----NITGNNPSSSGGFMGGALPYM 582
++++H D+ NIL++N+ + I DFGL++++ P S F
Sbjct: 136 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF-------- 187
Query: 583 KPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSP 631
+ APE+ + DV+SFGVVL EL T SP
Sbjct: 188 ----------WYAPESLTESKFSVAS-DVWSFGVVLYELFTYIEKSKSP 225
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 102/229 (44%), Gaps = 38/229 (16%)
Query: 415 LGKSGLGIV----YKVVLGN-GIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLR 469
LGK G V Y + N G VAV++L E+ R+F E++ + ++H NIVK +
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 76
Query: 470 AYYWAPDEK--LLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHEC 527
++ + LI +++ G+L + L+ + + L+ +G+ YL
Sbjct: 77 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ----KHKERIDHIKLLQYTSQICKGMEYL--- 129
Query: 528 SPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLI-----NITGNNPSSSGGFMGGALPYM 582
++++H D+ NIL++N+ + I DFGL++++ P S F
Sbjct: 130 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF-------- 181
Query: 583 KPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSP 631
+ APE+ + DV+SFGVVL EL T SP
Sbjct: 182 ----------WYAPESLTESKFSVAS-DVWSFGVVLYELFTYIEKSKSP 219
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 127/303 (41%), Gaps = 54/303 (17%)
Query: 415 LGKSGLGIVYKVVLGNGIP-------VAVRRLGE-GGEQRHREFVTEVQAIAKVKHPNIV 466
LG G VY+ + +G+P VAV+ L E EQ +F+ E I+K+ H NIV
Sbjct: 53 LGHGAFGEVYEGQV-SGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIV 111
Query: 467 KLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPS--TSLSWSTRLRIAKGTARGLAYL 524
+ + ++ + ++ G+L + LR +PS +SL+ L +A+ A G YL
Sbjct: 112 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 171
Query: 525 HECSPRKFVHGDIKPSNILLDND---FQPYISDFGLSRLINITGNNPSSSGGFMGGALPY 581
E F+H DI N LL I DFG++R +I + GG
Sbjct: 172 EE---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR--DIYRASYYRKGGCA------ 220
Query: 582 MKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTSIEVP 640
M PV+ + PEA + G K D +SFGV+L E+ + G P S + +E
Sbjct: 221 MLPVK------WMPPEAFMEGIF-TSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLE-- 271
Query: 641 DLVRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSE 700
+V G + P K V+ + C + PE RP + E
Sbjct: 272 ----FVTSGGRMDPP---------------KNCPGPVYRIMTQCWQHQPEDRPNFAIILE 312
Query: 701 NLE 703
+E
Sbjct: 313 RIE 315
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 102/229 (44%), Gaps = 38/229 (16%)
Query: 415 LGKSGLGIV----YKVVLGN-GIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLR 469
LGK G V Y + N G VAV++L E+ R+F E++ + ++H NIVK +
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 83
Query: 470 AYYWAPDEK--LLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHEC 527
++ + LI +++ G+L + L+ + + L+ +G+ YL
Sbjct: 84 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ----KHKERIDHIKLLQYTSQICKGMEYL--- 136
Query: 528 SPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLI-----NITGNNPSSSGGFMGGALPYM 582
++++H D+ NIL++N+ + I DFGL++++ P S F
Sbjct: 137 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF-------- 188
Query: 583 KPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSP 631
+ APE+ + DV+SFGVVL EL T SP
Sbjct: 189 ----------WYAPESLTESKFSVAS-DVWSFGVVLYELFTYIEKSKSP 226
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 121/298 (40%), Gaps = 66/298 (22%)
Query: 395 AIDKGFTFELDELLRASAYVLGKSGLGIVYKVVLG-NGIPVAVRRLGEGGEQRHREFVTE 453
+DK F + E+ ++G G G V+K +G ++R+ E+ RE
Sbjct: 4 TVDKRFGMDFKEI-----ELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAERE---- 54
Query: 454 VQAIAKVKHPNIVKLRA----YYWAPDEK-----------LLIS-DFISNGNLANALRGR 497
V+A+AK+ H NIV + + P+ L I +F G L + R
Sbjct: 55 VKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKR 114
Query: 498 NGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGL 557
G+ L L + + +G+ Y+H +K ++ D+KPSNI L + Q I DFGL
Sbjct: 115 RGEK---LDKVLALELFEQITKGVDYIH---SKKLINRDLKPSNIFLVDTKQVKIGDFGL 168
Query: 558 SRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVV 617
+ G S G L YM P Q + ++ D+Y+ G++
Sbjct: 169 VTSLKNDGKRXRSK-----GTLRYMSPEQ-------------ISSQDYGKEVDLYALGLI 210
Query: 618 LLELLTGKSPELSPTTSTSIEVPDLVRWVKKGFEEENPLSDMVD---AMLLQEVHAKK 672
L ELL T+ E ++ G +SD+ D LLQ++ +KK
Sbjct: 211 LAELL--------HVCDTAFETSKFFTDLRDGI-----ISDIFDKKEKTLLQKLLSKK 255
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 126/303 (41%), Gaps = 54/303 (17%)
Query: 415 LGKSGLGIVYKVVLGNGIP-------VAVRRLGE-GGEQRHREFVTEVQAIAKVKHPNIV 466
LG G VY+ + +G+P VAV+ L E EQ +F+ E I+K H NIV
Sbjct: 53 LGHGAFGEVYEGQV-SGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIV 111
Query: 467 KLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPS--TSLSWSTRLRIAKGTARGLAYL 524
+ + ++ + ++ G+L + LR +PS +SL+ L +A+ A G YL
Sbjct: 112 RCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 171
Query: 525 HECSPRKFVHGDIKPSNILLDND---FQPYISDFGLSRLINITGNNPSSSGGFMGGALPY 581
E F+H DI N LL I DFG++R +I + GG
Sbjct: 172 EE---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR--DIYRASYYRKGGCA------ 220
Query: 582 MKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTSIEVP 640
M PV+ + PEA + G K D +SFGV+L E+ + G P S + +E
Sbjct: 221 MLPVK------WMPPEAFMEGIF-TSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLE-- 271
Query: 641 DLVRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSE 700
+V G + P K V+ + C + PE RP + E
Sbjct: 272 ----FVTSGGRMDPP---------------KNCPGPVYRIMTQCWQHQPEDRPNFAIILE 312
Query: 701 NLE 703
+E
Sbjct: 313 RIE 315
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 128/303 (42%), Gaps = 54/303 (17%)
Query: 415 LGKSGLGIVYKVVLGNGIP-------VAVRRLGE-GGEQRHREFVTEVQAIAKVKHPNIV 466
LG G VY+ + +G+P VAV+ L E EQ +F+ E I+K H NIV
Sbjct: 79 LGHGAFGEVYEGQV-SGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIV 137
Query: 467 KLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPS--TSLSWSTRLRIAKGTARGLAYL 524
+ + ++ + ++ G+L + LR +PS +SL+ L +A+ A G YL
Sbjct: 138 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 197
Query: 525 HECSPRKFVHGDIKPSNILLDND---FQPYISDFGLSRLINITGNNPSSSGGFMGGALPY 581
E F+H DI N LL I DFG++R I +G + G
Sbjct: 198 EE---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI-------YRAGYYRKGGCA- 246
Query: 582 MKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTSIEVP 640
M PV+ + PEA + G K D +SFGV+L E+ + G P P+ S
Sbjct: 247 MLPVK------WMPPEAFMEGIF-TSKTDTWSFGVLLWEIFSLGYMP--YPSKSNQ---- 293
Query: 641 DLVRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSE 700
+++ +V G + P K V+ + C + PE RP + E
Sbjct: 294 EVLEFVTSGGRMDPP---------------KNCPGPVYRIMTQCWQHQPEDRPNFAIILE 338
Query: 701 NLE 703
+E
Sbjct: 339 RIE 341
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 102/229 (44%), Gaps = 38/229 (16%)
Query: 415 LGKSGLGIV----YKVVLGN-GIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLR 469
LGK G V Y + N G VAV++L E+ R+F E++ + ++H NIVK +
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 470 AYYWAPDEK--LLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHEC 527
++ + LI +++ G+L + L+ + + L+ +G+ YL
Sbjct: 96 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ----KHKERIDHIKLLQYTSQICKGMEYL--- 148
Query: 528 SPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLI-----NITGNNPSSSGGFMGGALPYM 582
++++H D+ NIL++N+ + I DFGL++++ P S F
Sbjct: 149 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF-------- 200
Query: 583 KPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSP 631
+ APE+ + DV+SFGVVL EL T SP
Sbjct: 201 ----------WYAPESLTESKFSVAS-DVWSFGVVLYELFTYIEKSKSP 238
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 102/229 (44%), Gaps = 38/229 (16%)
Query: 415 LGKSGLGIV----YKVVLGN-GIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLR 469
LGK G V Y + N G VAV++L E+ R+F E++ + ++H NIVK +
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 470 AYYWAPDEK--LLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHEC 527
++ + LI +++ G+L + L+ + + L+ +G+ YL
Sbjct: 81 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ----KHKERIDHIKLLQYTSQICKGMEYL--- 133
Query: 528 SPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLI-----NITGNNPSSSGGFMGGALPYM 582
++++H D+ NIL++N+ + I DFGL++++ P S F
Sbjct: 134 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF-------- 185
Query: 583 KPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSP 631
+ APE+ + DV+SFGVVL EL T SP
Sbjct: 186 ----------WYAPESLTESKFSVAS-DVWSFGVVLYELFTYIEKSKSP 223
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 102/229 (44%), Gaps = 38/229 (16%)
Query: 415 LGKSGLGIV----YKVVLGN-GIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLR 469
LGK G V Y + N G VAV++L E+ R+F E++ + ++H NIVK +
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 108
Query: 470 AYYWAPDEK--LLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHEC 527
++ + LI +++ G+L + L+ + + L+ +G+ YL
Sbjct: 109 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ----KHKERIDHIKLLQYTSQICKGMEYL--- 161
Query: 528 SPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLI-----NITGNNPSSSGGFMGGALPYM 582
++++H D+ NIL++N+ + I DFGL++++ P S F
Sbjct: 162 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF-------- 213
Query: 583 KPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSP 631
+ APE+ + DV+SFGVVL EL T SP
Sbjct: 214 ----------WYAPESLTESKFSVAS-DVWSFGVVLYELFTYIEKSKSP 251
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 102/229 (44%), Gaps = 38/229 (16%)
Query: 415 LGKSGLGIV----YKVVLGN-GIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLR 469
LGK G V Y + N G VAV++L E+ R+F E++ + ++H NIVK +
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 81
Query: 470 AYYWAPDEK--LLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHEC 527
++ + LI +++ G+L + L+ + + L+ +G+ YL
Sbjct: 82 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ----KHKERIDHIKLLQYTSQICKGMEYL--- 134
Query: 528 SPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLI-----NITGNNPSSSGGFMGGALPYM 582
++++H D+ NIL++N+ + I DFGL++++ P S F
Sbjct: 135 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF-------- 186
Query: 583 KPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSP 631
+ APE+ + DV+SFGVVL EL T SP
Sbjct: 187 ----------WYAPESLTESKFSVAS-DVWSFGVVLYELFTYIEKSKSP 224
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 95/221 (42%), Gaps = 39/221 (17%)
Query: 415 LGKSGLGIVY-------KVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVK 467
LGK G VY K +L + + G E + R EV+ + ++HPNI++
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR---EVEIQSHLRHPNILR 74
Query: 468 LRAYYWAPDEKLLISDFISNGNLANALRGRNG-QPSTSLSWSTRLRIAKGTARGLAYLHE 526
L Y+ LI ++ G + L+ + + ++ T L A L+Y
Sbjct: 75 LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSY--- 125
Query: 527 CSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQ 586
C ++ +H DIKP N+LL + + I++FG S + PSS + G L Y+ P
Sbjct: 126 CHSKRVIHRDIKPENLLLGSAGELKIANFGWS------VHAPSSRRTTLCGTLDYLPPEM 179
Query: 587 TEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
E G +K D++S GV+ E L GK P
Sbjct: 180 IE-------------GRMHDEKVDLWSLGVLCYEFLVGKPP 207
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 126/303 (41%), Gaps = 54/303 (17%)
Query: 415 LGKSGLGIVYKVVLGNGIP-------VAVRRLGE-GGEQRHREFVTEVQAIAKVKHPNIV 466
LG G VY+ + +G+P VAV+ L E EQ +F+ E I+K H NIV
Sbjct: 30 LGHGAFGEVYEGQV-SGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIV 88
Query: 467 KLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPS--TSLSWSTRLRIAKGTARGLAYL 524
+ + ++ + ++ G+L + LR +PS +SL+ L +A+ A G YL
Sbjct: 89 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 148
Query: 525 HECSPRKFVHGDIKPSNILLDND---FQPYISDFGLSRLINITGNNPSSSGGFMGGALPY 581
E F+H DI N LL I DFG++R +I + GG
Sbjct: 149 EE---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR--DIYRASYYRKGGCA------ 197
Query: 582 MKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTSIEVP 640
M PV+ + PEA + G K D +SFGV+L E+ + G P S + +E
Sbjct: 198 MLPVK------WMPPEAFMEGIF-TSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLE-- 248
Query: 641 DLVRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSE 700
+V G + P K V+ + C + PE RP + E
Sbjct: 249 ----FVTSGGRMDPP---------------KNCPGPVYRIMTQCWQHQPEDRPNFAIILE 289
Query: 701 NLE 703
+E
Sbjct: 290 RIE 292
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 126/303 (41%), Gaps = 54/303 (17%)
Query: 415 LGKSGLGIVYKVVLGNGIP-------VAVRRLGE-GGEQRHREFVTEVQAIAKVKHPNIV 466
LG G VY+ + +G+P VAV+ L E EQ +F+ E I+K H NIV
Sbjct: 38 LGHGAFGEVYEGQV-SGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIV 96
Query: 467 KLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPS--TSLSWSTRLRIAKGTARGLAYL 524
+ + ++ + ++ G+L + LR +PS +SL+ L +A+ A G YL
Sbjct: 97 RCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 156
Query: 525 HECSPRKFVHGDIKPSNILLDND---FQPYISDFGLSRLINITGNNPSSSGGFMGGALPY 581
E F+H DI N LL I DFG++R +I + GG
Sbjct: 157 EE---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR--DIYRASYYRKGGCA------ 205
Query: 582 MKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTSIEVP 640
M PV+ + PEA + G K D +SFGV+L E+ + G P S + +E
Sbjct: 206 MLPVK------WMPPEAFMEGIF-TSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLE-- 256
Query: 641 DLVRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSE 700
+V G + P K V+ + C + PE RP + E
Sbjct: 257 ----FVTSGGRMDPP---------------KNCPGPVYRIMTQCWQHQPEDRPNFAIILE 297
Query: 701 NLE 703
+E
Sbjct: 298 RIE 300
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 127/303 (41%), Gaps = 54/303 (17%)
Query: 415 LGKSGLGIVYKVVLGNGIP-------VAVRRLGE-GGEQRHREFVTEVQAIAKVKHPNIV 466
LG G VY+ + +G+P VAV+ L E EQ +F+ E I+K H NIV
Sbjct: 56 LGHGAFGEVYEGQV-SGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIV 114
Query: 467 KLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPS--TSLSWSTRLRIAKGTARGLAYL 524
+ + ++ + ++ G+L + LR +PS +SL+ L +A+ A G YL
Sbjct: 115 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 174
Query: 525 HECSPRKFVHGDIKPSNILLDN---DFQPYISDFGLSRLINITGNNPSSSGGFMGGALPY 581
E F+H DI N LL I DFG++R I G GG
Sbjct: 175 EE---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGY--YRKGGCA------ 223
Query: 582 MKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTSIEVP 640
M PV+ + PEA + G K D +SFGV+L E+ + G P P+ S
Sbjct: 224 MLPVK------WMPPEAFMEGIF-TSKTDTWSFGVLLWEIFSLGYMP--YPSKSNQ---- 270
Query: 641 DLVRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSE 700
+++ +V G + P K V+ + C + PE RP + E
Sbjct: 271 EVLEFVTSGGRMDPP---------------KNCPGPVYRIMTQCWQHQPEDRPNFAIILE 315
Query: 701 NLE 703
+E
Sbjct: 316 RIE 318
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 127/303 (41%), Gaps = 54/303 (17%)
Query: 415 LGKSGLGIVYKVVLGNGIP-------VAVRRLGE-GGEQRHREFVTEVQAIAKVKHPNIV 466
LG G VY+ + +G+P VAV+ L E EQ +F+ E I+K+ H NIV
Sbjct: 39 LGHGAFGEVYEGQV-SGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIV 97
Query: 467 KLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPS--TSLSWSTRLRIAKGTARGLAYL 524
+ + ++ + ++ G+L + LR +PS +SL+ L +A+ A G YL
Sbjct: 98 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 157
Query: 525 HECSPRKFVHGDIKPSNILLDND---FQPYISDFGLSRLINITGNNPSSSGGFMGGALPY 581
E F+H DI N LL I DFG++R +I + GG
Sbjct: 158 EE---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR--DIYRASYYRKGGCA------ 206
Query: 582 MKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTSIEVP 640
M PV+ + PEA + G K D +SFGV+L E+ + G P S + +E
Sbjct: 207 MLPVK------WMPPEAFMEGIF-TSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLE-- 257
Query: 641 DLVRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSE 700
+V G + P K V+ + C + PE RP + E
Sbjct: 258 ----FVTSGGRMDPP---------------KNCPGPVYRIMTQCWQHQPEDRPNFAIILE 298
Query: 701 NLE 703
+E
Sbjct: 299 RIE 301
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 102/229 (44%), Gaps = 38/229 (16%)
Query: 415 LGKSGLGIV----YKVVLGN-GIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLR 469
LGK G V Y + N G VAV++L E+ R+F E++ + ++H NIVK +
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 470 AYYWAPDEK--LLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHEC 527
++ + LI +++ G+L + L+ + + L+ +G+ YL
Sbjct: 96 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ----KHKERIDHIKLLQYTSQICKGMEYL--- 148
Query: 528 SPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLI-----NITGNNPSSSGGFMGGALPYM 582
++++H D+ NIL++N+ + I DFGL++++ P S F
Sbjct: 149 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF-------- 200
Query: 583 KPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSP 631
+ APE+ + DV+SFGVVL EL T SP
Sbjct: 201 ----------WYAPESLTESKFSVAS-DVWSFGVVLYELFTYIEKSKSP 238
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 87/211 (41%), Gaps = 36/211 (17%)
Query: 417 KSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPD 476
KS + KV+ + I EG E + R E++ A + HPNI++L Y++
Sbjct: 46 KSHFIVALKVLFKSQIE------KEGVEHQLRR---EIEIQAHLHHPNILRLYNYFYDRR 96
Query: 477 EKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGD 536
LI ++ G L L Q S + I + A L Y C +K +H D
Sbjct: 97 RIYLILEYAPRGELYKEL-----QKSCTFDEQRTATIMEELADALMY---CHGKKVIHRD 148
Query: 537 IKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAP 596
IKP N+LL + I+DFG S + PS M G L Y+ P E
Sbjct: 149 IKPENLLLGLKGELKIADFGWS------VHAPSLRRKTMCGTLDYLPPEMIE-------- 194
Query: 597 EARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
G +K D++ GV+ ELL G P
Sbjct: 195 -----GRMHNEKVDLWCIGVLCYELLVGNPP 220
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 95/221 (42%), Gaps = 39/221 (17%)
Query: 415 LGKSGLGIVY-------KVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVK 467
LGK G VY K +L + + G E + R EV+ + ++HPNI++
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR---EVEIQSHLRHPNILR 75
Query: 468 LRAYYWAPDEKLLISDFISNGNLANALRGRNG-QPSTSLSWSTRLRIAKGTARGLAYLHE 526
L Y+ LI ++ G + L+ + + ++ T L A L+Y
Sbjct: 76 LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSY--- 126
Query: 527 CSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQ 586
C ++ +H DIKP N+LL + + I++FG S + PSS + G L Y+ P
Sbjct: 127 CHSKRVIHRDIKPENLLLGSAGELKIANFGWS------VHAPSSRRTTLCGTLDYLPPEM 180
Query: 587 TEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
E G +K D++S GV+ E L GK P
Sbjct: 181 IE-------------GRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 115/282 (40%), Gaps = 50/282 (17%)
Query: 429 GNGIPVAVRRL-GEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEK--LLISDFI 485
G G VAV+ L + G Q + E+ + + H +I+K + EK L+ +++
Sbjct: 41 GTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYV 100
Query: 486 SNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLD 545
G+L + L P S+ + L A+ G+AYLH + ++H ++ N+LLD
Sbjct: 101 PLGSLRDYL------PRHSIGLAQLLLFAQQICEGMAYLHS---QHYIHRNLAARNVLLD 151
Query: 546 NDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRP 605
ND I DFGL++ + P G Y + + APE + +
Sbjct: 152 NDRLVKIGDFGLAKAV------PE-------GHEYYRVREDGDSPVFWYAPEC-LKEYKF 197
Query: 606 MQKWDVYSFGVVLLELLTGKSPELSPTTST---------SIEVPDLVRWVKKGFEEENPL 656
DV+SFGV L ELLT SP T + V L +++G E P
Sbjct: 198 YYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERG--ERLPR 255
Query: 657 SDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNV 698
D K V+HL C E + RP +N+
Sbjct: 256 PD-------------KCPCEVYHLMKNCWETEASFRPTFENL 284
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 99/220 (45%), Gaps = 34/220 (15%)
Query: 414 VLGKSGLGIVYKVVLGN-GIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYY 472
V+G G+VY+ L + G VA++++ +G ++RE +Q + K+ H NIV+LR ++
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRE----LQIMRKLDHCNIVRLRYFF 82
Query: 473 WAPDEKL------LISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHE 526
++ EK L+ D++ + R + T +L + + R LAY+H
Sbjct: 83 YSSGEKKDEVYLNLVLDYVP-ATVYRVARHYSRAKQTLPVIYVKLYMYQ-LFRSLAYIHS 140
Query: 527 CSPRKFVHGDIKPSNILLDNDFQPY-ISDFGLSRLINITGNNPSSSGGFMGGALPYMKPV 585
H DIKP N+LLD D + DFG ++ + P+ V
Sbjct: 141 FG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPN---------------V 180
Query: 586 QTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGK 625
+ YRAPE DV+S G VL ELL G+
Sbjct: 181 SXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 128/303 (42%), Gaps = 54/303 (17%)
Query: 415 LGKSGLGIVYKVVLGNGIP-------VAVRRLGE-GGEQRHREFVTEVQAIAKVKHPNIV 466
LG G VY+ + +G+P VAV+ L E EQ +F+ E I+K H NIV
Sbjct: 55 LGHGAFGEVYEGQV-SGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIV 113
Query: 467 KLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPS--TSLSWSTRLRIAKGTARGLAYL 524
+ + ++ + ++ G+L + LR +PS +SL+ L +A+ A G YL
Sbjct: 114 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 173
Query: 525 HECSPRKFVHGDIKPSNILLDND---FQPYISDFGLSRLINITGNNPSSSGGFMGGALPY 581
E F+H DI N LL I DFG++R +I + GG
Sbjct: 174 EE---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR--DIYRASYYRKGGCA------ 222
Query: 582 MKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTSIEVP 640
M PV+ + PEA + G K D +SFGV+L E+ + G P P+ S
Sbjct: 223 MLPVK------WMPPEAFMEGIF-TSKTDTWSFGVLLWEIFSLGYMP--YPSKSNQ---- 269
Query: 641 DLVRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSE 700
+++ +V G + P K V+ + C + PE RP + E
Sbjct: 270 EVLEFVTSGGRMDPP---------------KNCPGPVYRIMTQCWQHQPEDRPNFAIILE 314
Query: 701 NLE 703
+E
Sbjct: 315 RIE 317
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 131/299 (43%), Gaps = 60/299 (20%)
Query: 415 LGKSGLGIVYKVVLGN--GIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYY 472
+GK G V+LG+ G VAV+ + + + F+ E + +++H N+V+L
Sbjct: 29 IGKGEFG---DVMLGDYRGNKVAVKCIK--NDATAQAFLAEASVMTQLRHSNLVQLLGV- 82
Query: 473 WAPDEK---LLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSP 529
+EK +++++++ G+L + LR R + L L+ + + YL
Sbjct: 83 -IVEEKGGLYIVTEYMAKGSLVDYLRSRG---RSVLGGDCLLKFSLDVCEAMEYL---EG 135
Query: 530 RKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEK 589
FVH D+ N+L+ D +SDFGL++ + T + G LP
Sbjct: 136 NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDT---------GKLPV-------- 178
Query: 590 TNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTSIEVPDLVRWVKK 648
+ APEA + + K DV+SFG++L E+ + G+ P I + D+V V+K
Sbjct: 179 --KWTAPEA-LREKKFSTKSDVWSFGILLWEIYSFGRVP------YPRIPLKDVVPRVEK 229
Query: 649 GFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERIGT 707
G++ + P D AV+ + C D +RP + E LE I T
Sbjct: 230 GYKMDAP--DGCPP-------------AVYEVMKNCWHLDAAMRPSFLQLREQLEHIKT 273
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 99/216 (45%), Gaps = 30/216 (13%)
Query: 415 LGKSGLGIVYKVVLGNGIPVAVRRLG--EGGEQRHREFVTEVQAIAKVKHPNIVKLRAYY 472
LG G+V+KV V R+L E + + E+Q + + P IV +
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 473 WAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKF 532
++ E + + + G+L L+ P L +++ +GL YL E K
Sbjct: 74 YSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-----KVSIAVIKGLTYLRE--KHKI 126
Query: 533 VHGDIKPSNILLDNDFQPYISDFGLS-RLINITGNNPSSSGGFMGGALPYMKPVQTEKTN 591
+H D+KPSNIL+++ + + DFG+S +LI+ N+ F+G T
Sbjct: 127 MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS------FVG-------------TR 167
Query: 592 NYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
+Y +PE R+ G + D++S G+ L+E+ G+ P
Sbjct: 168 SYMSPE-RLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 115/282 (40%), Gaps = 50/282 (17%)
Query: 429 GNGIPVAVRRL-GEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEK--LLISDFI 485
G G VAV+ L + G Q + E+ + + H +I+K + EK L+ +++
Sbjct: 41 GTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYV 100
Query: 486 SNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLD 545
G+L + L P S+ + L A+ G+AYLH + ++H ++ N+LLD
Sbjct: 101 PLGSLRDYL------PRHSIGLAQLLLFAQQICEGMAYLH---AQHYIHRNLAARNVLLD 151
Query: 546 NDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRP 605
ND I DFGL++ + P G Y + + APE + +
Sbjct: 152 NDRLVKIGDFGLAKAV------PE-------GHEYYRVREDGDSPVFWYAPEC-LKEYKF 197
Query: 606 MQKWDVYSFGVVLLELLTGKSPELSPTTST---------SIEVPDLVRWVKKGFEEENPL 656
DV+SFGV L ELLT SP T + V L +++G E P
Sbjct: 198 YYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERG--ERLPR 255
Query: 657 SDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNV 698
D K V+HL C E + RP +N+
Sbjct: 256 PD-------------KCPCEVYHLMKNCWETEASFRPTFENL 284
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 114/284 (40%), Gaps = 54/284 (19%)
Query: 429 GNGIPVAVRRL-GEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKL----LISD 483
G G VAV+ L + G Q + E+ + + H +I+K + D L+ +
Sbjct: 58 GTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKG--CCEDAGAASLQLVME 115
Query: 484 FISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNIL 543
++ G+L + L P S+ + L A+ G+AYLH + ++H D+ N+L
Sbjct: 116 YVPLGSLRDYL------PRHSIGLAQLLLFAQQICEGMAYLH---AQHYIHRDLAARNVL 166
Query: 544 LDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGN 603
LDND I DFGL++ + P G Y + + APE +
Sbjct: 167 LDNDRLVKIGDFGLAKAV------PE-------GHEXYRVREDGDSPVFWYAPEC-LKEY 212
Query: 604 RPMQKWDVYSFGVVLLELLTGKSPELSPTTST---------SIEVPDLVRWVKKGFEEEN 654
+ DV+SFGV L ELLT SP T + V L +++G E
Sbjct: 213 KFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERG--ERL 270
Query: 655 PLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNV 698
P D A V+HL C E + RP +N+
Sbjct: 271 PRPDKCPA-------------EVYHLMKNCWETEASFRPTFENL 301
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 126/303 (41%), Gaps = 54/303 (17%)
Query: 415 LGKSGLGIVYKVVLGNGIP-------VAVRRLGE-GGEQRHREFVTEVQAIAKVKHPNIV 466
LG G VY+ + +G+P VAV+ L E EQ +F+ E I+K H NIV
Sbjct: 39 LGHGAFGEVYEGQV-SGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIV 97
Query: 467 KLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPS--TSLSWSTRLRIAKGTARGLAYL 524
+ + ++ + ++ G+L + LR +PS +SL+ L +A+ A G YL
Sbjct: 98 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 157
Query: 525 HECSPRKFVHGDIKPSNILLDND---FQPYISDFGLSRLINITGNNPSSSGGFMGGALPY 581
E F+H DI N LL I DFG++R +I + GG
Sbjct: 158 EE---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR--DIYRASYYRKGGCA------ 206
Query: 582 MKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTSIEVP 640
M PV+ + PEA + G K D +SFGV+L E+ + G P S + +E
Sbjct: 207 MLPVK------WMPPEAFMEGIF-TSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLE-- 257
Query: 641 DLVRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSE 700
+V G + P K V+ + C + PE RP + E
Sbjct: 258 ----FVTSGGRMDPP---------------KNCPGPVYRIMTQCWQHQPEDRPNFAIILE 298
Query: 701 NLE 703
+E
Sbjct: 299 RIE 301
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 75/187 (40%), Gaps = 30/187 (16%)
Query: 444 EQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPST 503
E+ H E E+ + + HPNI+KL + L+++F G L + R+
Sbjct: 87 EKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDEC 146
Query: 504 SLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDND---FQPYISDFGLSRL 560
+ I K G+ YLH VH DIKP NILL+N I DFGLS
Sbjct: 147 DAA-----NIMKQILSGICYLH---KHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSF 198
Query: 561 INITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLE 620
+ G T Y APE V + +K DV+S GV++
Sbjct: 199 FSKDYKLRDRLG-----------------TAYYIAPE--VLKKKYNEKCDVWSCGVIMYI 239
Query: 621 LLTGKSP 627
LL G P
Sbjct: 240 LLCGYPP 246
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 141/328 (42%), Gaps = 66/328 (20%)
Query: 390 EGELVAIDK----GFTFELDELLRASAYVLGKSGLGIVYKVVLGN--GIPVAVRRLGEGG 443
EG + A D+ G+ + EL +L G G V+LG+ G VAV+ +
Sbjct: 174 EGTVAAQDEFYRSGWALNMKEL-----KLLQTIGKGEFGDVMLGDYRGNKVAVKCIK--N 226
Query: 444 EQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEK---LLISDFISNGNLANALRGRNGQ 500
+ + F+ E + +++H N+V+L +EK +++++++ G+L + LR R
Sbjct: 227 DATAQAFLAEASVMTQLRHSNLVQLLGV--IVEEKGGLYIVTEYMAKGSLVDYLRSRG-- 282
Query: 501 PSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRL 560
+ L L+ + + YL FVH D+ N+L+ D +SDFGL++
Sbjct: 283 -RSVLGGDCLLKFSLDVCEAMEYL---EGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKE 338
Query: 561 INITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLE 620
+ T + G LP + APEA + + K DV+SFG++L E
Sbjct: 339 ASSTQDT---------GKLPV----------KWTAPEA-LREKKFSTKSDVWSFGILLWE 378
Query: 621 LLT-GKSPELSPTTSTSIEVPDLVRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFH 679
+ + G+ P I + D+V V+KG++ + P D AV+
Sbjct: 379 IYSFGRVP------YPRIPLKDVVPRVEKGYKMDAP--DGCPP-------------AVYD 417
Query: 680 LALACTEADPEVRPRMKNVSENLERIGT 707
+ C D RP + E LE I T
Sbjct: 418 VMKNCWHLDAATRPTFLQLREQLEHIRT 445
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 126/303 (41%), Gaps = 54/303 (17%)
Query: 415 LGKSGLGIVYKVVLGNGIP-------VAVRRLGE-GGEQRHREFVTEVQAIAKVKHPNIV 466
LG G VY+ + +G+P VAV+ L E EQ +F+ E I+K H NIV
Sbjct: 38 LGHGAFGEVYEGQV-SGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIV 96
Query: 467 KLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPS--TSLSWSTRLRIAKGTARGLAYL 524
+ + ++ + ++ G+L + LR +PS +SL+ L +A+ A G YL
Sbjct: 97 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 156
Query: 525 HECSPRKFVHGDIKPSNILLDND---FQPYISDFGLSRLINITGNNPSSSGGFMGGALPY 581
E F+H DI N LL I DFG++R +I + GG
Sbjct: 157 EE---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR--DIYRASYYRKGGCA------ 205
Query: 582 MKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTSIEVP 640
M PV+ + PEA + G K D +SFGV+L E+ + G P S + +E
Sbjct: 206 MLPVK------WMPPEAFMEGIF-TSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLE-- 256
Query: 641 DLVRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSE 700
+V G + P K V+ + C + PE RP + E
Sbjct: 257 ----FVTSGGRMDPP---------------KNCPGPVYRIMTQCWQHQPEDRPNFAIILE 297
Query: 701 NLE 703
+E
Sbjct: 298 RIE 300
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 97/224 (43%), Gaps = 30/224 (13%)
Query: 415 LGKSGLGIVYKVV-LGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYW 473
LG G VYK + A + + E+ +++ E+ +A HPNIVKL ++
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 474 APDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFV 533
+ ++ +F + G + +A+ +P T S + K T L YLH+ K +
Sbjct: 105 YENNLWILIEFCAGGAV-DAVMLELERPLTE---SQIQVVCKQTLDALNYLHD---NKII 157
Query: 534 HGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNY 593
H D+K NIL D ++DFG+S F+G PY +
Sbjct: 158 HRDLKAGNILFTLDGDIKLADFGVSAK---NTRXIQRRDSFIGT--PY-----------W 201
Query: 594 RAPEA---RVPGNRPMQ-KWDVYSFGVVLLELLTGKSP--ELSP 631
APE +RP K DV+S G+ L+E+ + P EL+P
Sbjct: 202 MAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNP 245
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 103/224 (45%), Gaps = 28/224 (12%)
Query: 415 LGKSGLGIV----YKVVLGN-GIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLR 469
LGK G V Y + N G VAV++L E+ R+F E++ + ++H NIVK +
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 78
Query: 470 AYYWAPDEK--LLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHEC 527
++ + LI +++ G+L + L+ + + L+ +G+ YL
Sbjct: 79 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ----KHKERIDHIKLLQYTSQICKGMEYL--- 131
Query: 528 SPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQT 587
++++H ++ NIL++N+ + I DFGL++++ + P P+
Sbjct: 132 GTKRYIHRNLATRNILVENENRVKIGDFGLTKVL-------PQDKEYYKVKEPGESPI-- 182
Query: 588 EKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSP 631
+ APE+ + DV+SFGVVL EL T SP
Sbjct: 183 ----FWYAPESLTESKFSVAS-DVWSFGVVLYELFTYIEKSKSP 221
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 131/299 (43%), Gaps = 60/299 (20%)
Query: 415 LGKSGLGIVYKVVLGN--GIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYY 472
+GK G V+LG+ G VAV+ + + + F+ E + +++H N+V+L
Sbjct: 14 IGKGEFG---DVMLGDYRGNKVAVKCIK--NDATAQAFLAEASVMTQLRHSNLVQLLGV- 67
Query: 473 WAPDEK---LLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSP 529
+EK +++++++ G+L + LR R + L L+ + + YL
Sbjct: 68 -IVEEKGGLYIVTEYMAKGSLVDYLRSRG---RSVLGGDCLLKFSLDVCEAMEYL---EG 120
Query: 530 RKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEK 589
FVH D+ N+L+ D +SDFGL++ + T + G LP
Sbjct: 121 NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDT---------GKLPV-------- 163
Query: 590 TNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTSIEVPDLVRWVKK 648
+ APEA + + K DV+SFG++L E+ + G+ P I + D+V V+K
Sbjct: 164 --KWTAPEA-LREKKFSTKSDVWSFGILLWEIYSFGRVP------YPRIPLKDVVPRVEK 214
Query: 649 GFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERIGT 707
G++ + P D AV+ + C D +RP + E LE I T
Sbjct: 215 GYKMDAP--DGCPP-------------AVYEVMKNCWHLDAAMRPSFLQLREQLEHIKT 258
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 105/238 (44%), Gaps = 40/238 (16%)
Query: 400 FTFELDELLRASAYVLGKSGLGIVYK-VVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIA 458
+ +E DE VLGK GIVY L N + +A++ + E + + E+
Sbjct: 3 YDYEYDE--NGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHK 60
Query: 459 KVKHPNIVKLRAYYWAPDEKLLISDFISN---GNLANALRGRNG---QPSTSLSWSTRLR 512
+KH NIV+ Y + E I F+ G+L+ LR + G ++ + T
Sbjct: 61 HLKHKNIVQ---YLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYT--- 114
Query: 513 IAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPY--ISDFGLSRLINITGNNPSS 570
K GL YLH+ + VH DIK N+L+ N + ISDFG S+ + G NP +
Sbjct: 115 --KQILEGLKYLHD---NQIVHRDIKGDNVLI-NTYSGVLKISDFGTSK--RLAGINPCT 166
Query: 571 SGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKW-DVYSFGVVLLELLTGKSP 627
G L YM APE G R K D++S G ++E+ TGK P
Sbjct: 167 ET--FTGTLQYM------------APEIIDKGPRGYGKAADIWSLGCTIIEMATGKPP 210
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 98/216 (45%), Gaps = 30/216 (13%)
Query: 415 LGKSGLGIVYKVVLGNGIPVAVRRLG--EGGEQRHREFVTEVQAIAKVKHPNIVKLRAYY 472
LG G+V+KV V R+L E + + E+Q + + P IV +
Sbjct: 17 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 76
Query: 473 WAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKF 532
++ E + + + G+L L+ P L +++ +GL YL E K
Sbjct: 77 YSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-----KVSIAVIKGLTYLRE--KHKI 129
Query: 533 VHGDIKPSNILLDNDFQPYISDFGLS-RLINITGNNPSSSGGFMGGALPYMKPVQTEKTN 591
+H D+KPSNIL+++ + + DFG+S +LI+ N F+G T
Sbjct: 130 MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMANE------FVG-------------TR 170
Query: 592 NYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
+Y +PE R+ G + D++S G+ L+E+ G+ P
Sbjct: 171 SYMSPE-RLQGTHYSVQSDIWSMGLSLVEMAVGRYP 205
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 126/303 (41%), Gaps = 54/303 (17%)
Query: 415 LGKSGLGIVYKVVLGNGIP-------VAVRRLGE-GGEQRHREFVTEVQAIAKVKHPNIV 466
LG G VY+ + +G+P VAV+ L E EQ +F+ E I+K H NIV
Sbjct: 45 LGHGAFGEVYEGQV-SGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIV 103
Query: 467 KLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPS--TSLSWSTRLRIAKGTARGLAYL 524
+ + ++ + ++ G+L + LR +PS +SL+ L +A+ A G YL
Sbjct: 104 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 163
Query: 525 HECSPRKFVHGDIKPSNILLDND---FQPYISDFGLSRLINITGNNPSSSGGFMGGALPY 581
E F+H DI N LL I DFG++R +I + GG
Sbjct: 164 EE---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR--DIYRASYYRKGGCA------ 212
Query: 582 MKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTSIEVP 640
M PV+ + PEA + G K D +SFGV+L E+ + G P S + +E
Sbjct: 213 MLPVK------WMPPEAFMEGIF-TSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLE-- 263
Query: 641 DLVRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSE 700
+V G + P K V+ + C + PE RP + E
Sbjct: 264 ----FVTSGGRMDPP---------------KNCPGPVYRIMTQCWQHQPEDRPNFAIILE 304
Query: 701 NLE 703
+E
Sbjct: 305 RIE 307
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 101/220 (45%), Gaps = 34/220 (15%)
Query: 414 VLGKSGLGIVYKVVLGN-GIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYY 472
V+G G+VY+ L + G VA++++ +G ++RE +Q + K+ H NIV+LR ++
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRE----LQIMRKLDHCNIVRLRYFF 82
Query: 473 WAPDEKL------LISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHE 526
++ EK L+ D++ + R + T +L + + R LAY+H
Sbjct: 83 YSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQ-LFRSLAYIHS 140
Query: 527 CSPRKFVHGDIKPSNILLDNDFQPY-ISDFGLSRLINITGNNPSSSGGFMGGALPYMKPV 585
H DIKP N+LLD D + DFG ++ + P+ S Y+
Sbjct: 141 FG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVS---------YI--- 183
Query: 586 QTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGK 625
+ YRAPE DV+S G VL ELL G+
Sbjct: 184 ---CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 126/303 (41%), Gaps = 54/303 (17%)
Query: 415 LGKSGLGIVYKVVLGNGIP-------VAVRRLGE-GGEQRHREFVTEVQAIAKVKHPNIV 466
LG G VY+ + +G+P VAV+ L E EQ +F+ E I+K H NIV
Sbjct: 53 LGHGAFGEVYEGQV-SGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIV 111
Query: 467 KLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPS--TSLSWSTRLRIAKGTARGLAYL 524
+ + ++ + ++ G+L + LR +PS +SL+ L +A+ A G YL
Sbjct: 112 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 171
Query: 525 HECSPRKFVHGDIKPSNILLDND---FQPYISDFGLSRLINITGNNPSSSGGFMGGALPY 581
E F+H DI N LL I DFG++R +I + GG
Sbjct: 172 EE---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR--DIYRASYYRKGGCA------ 220
Query: 582 MKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTSIEVP 640
M PV+ + PEA + G K D +SFGV+L E+ + G P S + +E
Sbjct: 221 MLPVK------WMPPEAFMEGIF-TSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLE-- 271
Query: 641 DLVRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSE 700
+V G + P K V+ + C + PE RP + E
Sbjct: 272 ----FVTSGGRMDPP---------------KNCPGPVYRIMTQCWQHQPEDRPNFAIILE 312
Query: 701 NLE 703
+E
Sbjct: 313 RIE 315
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 101/220 (45%), Gaps = 34/220 (15%)
Query: 414 VLGKSGLGIVYKVVLGN-GIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYY 472
V+G G+VY+ L + G VA++++ +G ++RE +Q + K+ H NIV+LR ++
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRE----LQIMRKLDHCNIVRLRYFF 82
Query: 473 WAPDEKL------LISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHE 526
++ EK L+ D++ + R + T +L + + R LAY+H
Sbjct: 83 YSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQ-LFRSLAYIHS 140
Query: 527 CSPRKFVHGDIKPSNILLDNDFQPY-ISDFGLSRLINITGNNPSSSGGFMGGALPYMKPV 585
H DIKP N+LLD D + DFG ++ + P+ S Y+
Sbjct: 141 FG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVS---------YI--- 183
Query: 586 QTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGK 625
+ YRAPE DV+S G VL ELL G+
Sbjct: 184 ---CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 97/224 (43%), Gaps = 30/224 (13%)
Query: 415 LGKSGLGIVYKVV-LGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYW 473
LG G VYK + A + + E+ +++ E+ +A HPNIVKL ++
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 474 APDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFV 533
+ ++ +F + G + +A+ +P T S + K T L YLH+ K +
Sbjct: 105 YENNLWILIEFCAGGAV-DAVMLELERPLTE---SQIQVVCKQTLDALNYLHD---NKII 157
Query: 534 HGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNY 593
H D+K NIL D ++DFG+S F+G PY +
Sbjct: 158 HRDLKAGNILFTLDGDIKLADFGVSAK---NTRXIQRRDXFIGT--PY-----------W 201
Query: 594 RAPEA---RVPGNRPMQ-KWDVYSFGVVLLELLTGKSP--ELSP 631
APE +RP K DV+S G+ L+E+ + P EL+P
Sbjct: 202 MAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNP 245
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 85/180 (47%), Gaps = 27/180 (15%)
Query: 453 EVQAIAKVKHPNIVKL---RAYYWAPDEKL-LISDFISNGNLANALRGRNGQPSTSLSWS 508
EV ++ +KH NI++ + D L LI+ F G+L++ L+ + +SW+
Sbjct: 68 EVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLK------ANVVSWN 121
Query: 509 TRLRIAKGTARGLAYLHECSPR-------KFVHGDIKPSNILLDNDFQPYISDFGLSRLI 561
IA+ ARGLAYLHE P H DIK N+LL N+ I+DFGL+ L
Sbjct: 122 ELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLA-LK 180
Query: 562 NITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLEL 621
G + + G + G YM P E N++ + D+Y+ G+VL EL
Sbjct: 181 FEAGKSAGDTHGQV-GTRRYMAPEVLEGAINFQ--------RDAFLRIDMYAMGLVLWEL 231
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 101/226 (44%), Gaps = 30/226 (13%)
Query: 414 VLGKSG-LGIVYKVV-LGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAY 471
++G+ G G VYK + A + + E+ +++ E+ +A HPNIVKL
Sbjct: 16 IIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDA 75
Query: 472 YWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRK 531
++ + ++ +F + G + +A+ +P T S + K T L YLH+ K
Sbjct: 76 FYYENNLWILIEFCAGGAV-DAVMLELERPLTE---SQIQVVCKQTLDALNYLHD---NK 128
Query: 532 FVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTN 591
+H D+K NIL D ++DFG+S T F+G PY
Sbjct: 129 IIHRDLKAGNILFTLDGDIKLADFGVSA--KNTRTXIQRRDSFIGT--PY---------- 174
Query: 592 NYRAPEA---RVPGNRPMQ-KWDVYSFGVVLLELLTGKSP--ELSP 631
+ APE +RP K DV+S G+ L+E+ + P EL+P
Sbjct: 175 -WMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNP 219
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 128/303 (42%), Gaps = 54/303 (17%)
Query: 415 LGKSGLGIVYKVVLGNGIP-------VAVRRLGE-GGEQRHREFVTEVQAIAKVKHPNIV 466
LG G VY+ + +G+P VAV+ L E EQ +F+ E I+K H NIV
Sbjct: 65 LGHGAFGEVYEGQV-SGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIV 123
Query: 467 KLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPS--TSLSWSTRLRIAKGTARGLAYL 524
+ + ++ + ++ G+L + LR +PS +SL+ L +A+ A G YL
Sbjct: 124 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 183
Query: 525 HECSPRKFVHGDIKPSNILLDND---FQPYISDFGLSRLINITGNNPSSSGGFMGGALPY 581
E F+H DI N LL I DFG++R +I + GG
Sbjct: 184 EE---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR--DIYRASYYRKGGCA------ 232
Query: 582 MKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTSIEVP 640
M PV+ + PEA + G K D +SFGV+L E+ + G P P+ S
Sbjct: 233 MLPVK------WMPPEAFMEGIF-TSKTDTWSFGVLLWEIFSLGYMP--YPSKSNQ---- 279
Query: 641 DLVRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSE 700
+++ +V G + P K V+ + C + PE RP + E
Sbjct: 280 EVLEFVTSGGRMDPP---------------KNCPGPVYRIMTQCWQHQPEDRPNFAIILE 324
Query: 701 NLE 703
+E
Sbjct: 325 RIE 327
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 94/217 (43%), Gaps = 27/217 (12%)
Query: 415 LGKSGLGIVYKVV-LGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYW 473
+G+ G VY + + G VA+R++ + + + E+ + + K+PNIV Y
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 474 APDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFV 533
DE ++ ++++ G+L + + T + + + + L +LH + +
Sbjct: 89 VGDELWVVMEYLAGGSLTDVV------TETCMDEGQIAAVCRECLQALEFLHS---NQVI 139
Query: 534 HGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNY 593
H DIK NILL D ++DFG I P S PY +
Sbjct: 140 HRDIKSDNILLGMDGSVKLTDFGFCAQI-----TPEQSKRSXMVGTPY-----------W 183
Query: 594 RAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELS 630
APE V K D++S G++ +E++ G+ P L+
Sbjct: 184 MAPEV-VTRKAYGPKVDIWSLGIMAIEMIEGEPPYLN 219
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 94/217 (43%), Gaps = 27/217 (12%)
Query: 415 LGKSGLGIVYKVV-LGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYW 473
+G+ G VY + + G VA+R++ + + + E+ + + K+PNIV Y
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 474 APDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFV 533
DE ++ ++++ G+L + + T + + + + L +LH + +
Sbjct: 88 VGDELWVVMEYLAGGSLTDVV------TETCMDEGQIAAVCRECLQALEFLHS---NQVI 138
Query: 534 HGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNY 593
H DIK NILL D ++DFG I P S PY +
Sbjct: 139 HRDIKSDNILLGMDGSVKLTDFGFCAQI-----TPEQSKRSXMVGTPY-----------W 182
Query: 594 RAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELS 630
APE V K D++S G++ +E++ G+ P L+
Sbjct: 183 MAPEV-VTRKAYGPKVDIWSLGIMAIEMIEGEPPYLN 218
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 94/217 (43%), Gaps = 27/217 (12%)
Query: 415 LGKSGLGIVYKVV-LGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYW 473
+G+ G VY + + G VA+R++ + + + E+ + + K+PNIV Y
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 474 APDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFV 533
DE ++ ++++ G+L + + T + + + + L +LH + +
Sbjct: 88 VGDELWVVMEYLAGGSLTDVV------TETCMDEGQIAAVCRECLQALEFLHS---NQVI 138
Query: 534 HGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNY 593
H DIK NILL D ++DFG I P S PY +
Sbjct: 139 HRDIKSDNILLGMDGSVKLTDFGFCAQI-----TPEQSKRSTMVGTPY-----------W 182
Query: 594 RAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELS 630
APE V K D++S G++ +E++ G+ P L+
Sbjct: 183 MAPEV-VTRKAYGPKVDIWSLGIMAIEMIEGEPPYLN 218
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 93/221 (42%), Gaps = 34/221 (15%)
Query: 414 VLGKSGLGIVY---KVVLGNGIPVAVRRLGEGGEQRHRE-FVTEVQAIAKVKHPNIVKLR 469
VLGK G V + G V V + ++ +E + EVQ + ++ HPNI+KL
Sbjct: 33 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 92
Query: 470 AYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSP 529
++ L+ + + G L + + R S RI + G+ Y+H+
Sbjct: 93 EFFEDKGYFYLVGEVYTGGELFDEIISRK-----RFSEVDAARIIRQVLSGITYMHK--- 144
Query: 530 RKFVHGDIKPSNILLDN---DFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQ 586
K VH D+KP N+LL++ D I DFGLS + G
Sbjct: 145 NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIG-------------- 190
Query: 587 TEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
T Y APE V +K DV+S GV+L LL+G P
Sbjct: 191 ---TAYYIAPE--VLHGTYDEKCDVWSTGVILYILLSGCPP 226
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 91/213 (42%), Gaps = 38/213 (17%)
Query: 427 VLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFIS 486
VL I V ++++ ++R ++ V HP I+++ + + +I D+I
Sbjct: 38 VLKKEIVVRLKQVEHTNDER--------LMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIE 89
Query: 487 NGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDN 546
G L + LR P+ + A L YLH + ++ D+KP NILLD
Sbjct: 90 GGELFSLLRKSQRFPNPVAKFY-----AAEVCLALEYLHS---KDIIYRDLKPENILLDK 141
Query: 547 DFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPM 606
+ I+DFG ++ + P + G T +Y APE V +P
Sbjct: 142 NGHIKITDFGFAKYV------PDVTYXLCG-------------TPDYIAPE--VVSTKPY 180
Query: 607 QK-WDVYSFGVVLLELLTGKSPELSPTTSTSIE 638
K D +SFG+++ E+L G +P T + E
Sbjct: 181 NKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYE 213
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 101/234 (43%), Gaps = 33/234 (14%)
Query: 415 LGKSGLGIVY---KVVLGNGIPVAVRRLG---EGGEQRHREFVTEVQAIAKVKHPNIVKL 468
LG G+ VY +L I VA++ + E+ + F EV +++ H NIV +
Sbjct: 19 LGGGGMSTVYLAEDTILN--IKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSM 76
Query: 469 RAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECS 528
D L+ ++I L+ + LS T + G+ + H+
Sbjct: 77 IDVDEEDDCYYLVMEYIEGPTLSEYIESHG-----PLSVDTAINFTNQILDGIKHAHDM- 130
Query: 529 PRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTE 588
+ VH DIKP NIL+D++ I DFG+++ ++ T + + G + Y P Q +
Sbjct: 131 --RIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETS---LTQTNHVLGTVQYFSPEQAK 185
Query: 589 KTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDL 642
G + D+YS G+VL E+L G+ P + T+ SI + +
Sbjct: 186 -------------GEATDECTDIYSIGIVLYEMLVGEPP-FNGETAVSIAIKHI 225
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 94/217 (43%), Gaps = 27/217 (12%)
Query: 415 LGKSGLGIVYKVV-LGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYW 473
+G+ G VY + + G VA+R++ + + + E+ + + K+PNIV Y
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 474 APDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFV 533
DE ++ ++++ G+L + + T + + + + L +LH + +
Sbjct: 88 VGDELWVVMEYLAGGSLTDVV------TETCMDEGQIAAVCRECLQALEFLHS---NQVI 138
Query: 534 HGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNY 593
H DIK NILL D ++DFG I P S PY +
Sbjct: 139 HRDIKSDNILLGMDGSVKLTDFGFCAQI-----TPEQSKRSEMVGTPY-----------W 182
Query: 594 RAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELS 630
APE V K D++S G++ +E++ G+ P L+
Sbjct: 183 MAPEV-VTRKAYGPKVDIWSLGIMAIEMIEGEPPYLN 218
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 99/230 (43%), Gaps = 28/230 (12%)
Query: 415 LGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRH--REFVTEVQAIAKVKHPNIVKLRAYY 472
+G+ G+VYK G VA++R+ E + E+ + ++ HPNIV L
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI 88
Query: 473 WAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKF 532
+ L+ +F+ +L L + T L S RG+A+ H+ +
Sbjct: 89 HSERCLTLVFEFMEK-DLKKVL----DENKTGLQDSQIKIYLYQLLRGVAHCHQ---HRI 140
Query: 533 VHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNN 592
+H D+KP N+L+++D ++DFGL+R I P T
Sbjct: 141 LHRDLKPQNLLINSDGALKLADFGLARAFGI----------------PVRSYTHEVVTLW 184
Query: 593 YRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDL 642
YRAP+ + + D++S G + E++TGK L P + ++P +
Sbjct: 185 YRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKP--LFPGVTDDDQLPKI 232
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 99/230 (43%), Gaps = 28/230 (12%)
Query: 415 LGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRH--REFVTEVQAIAKVKHPNIVKLRAYY 472
+G+ G+VYK G VA++R+ E + E+ + ++ HPNIV L
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI 88
Query: 473 WAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKF 532
+ L+ +F+ +L L + T L S RG+A+ H+ +
Sbjct: 89 HSERCLTLVFEFMEK-DLKKVL----DENKTGLQDSQIKIYLYQLLRGVAHCHQ---HRI 140
Query: 533 VHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNN 592
+H D+KP N+L+++D ++DFGL+R I P T
Sbjct: 141 LHRDLKPQNLLINSDGALKLADFGLARAFGI----------------PVRSYTHEVVTLW 184
Query: 593 YRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDL 642
YRAP+ + + D++S G + E++TGK L P + ++P +
Sbjct: 185 YRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKP--LFPGVTDDDQLPKI 232
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 75/182 (41%), Gaps = 22/182 (12%)
Query: 453 EVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLR 512
E+ A + H N+VK + + + L ++ S G L + + G P R
Sbjct: 55 EICINAMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-----R 109
Query: 513 IAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSG 572
G+ YLH H DIKP N+LLD ISDFGL+ + NN
Sbjct: 110 FFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRY--NNRERLL 164
Query: 573 GFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPT 632
M G LPY+ P ++ + P DV+S G+VL +L G+ P P+
Sbjct: 165 NKMCGTLPYVAPELLKRREFHAEPV------------DVWSCGIVLTAMLAGELPWDQPS 212
Query: 633 TS 634
S
Sbjct: 213 DS 214
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 93/221 (42%), Gaps = 34/221 (15%)
Query: 414 VLGKSGLGIVY---KVVLGNGIPVAVRRLGEGGEQRHRE-FVTEVQAIAKVKHPNIVKLR 469
VLGK G V + G V V + ++ +E + EVQ + ++ HPNI+KL
Sbjct: 56 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 115
Query: 470 AYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSP 529
++ L+ + + G L + + R S RI + G+ Y+H+
Sbjct: 116 EFFEDKGYFYLVGEVYTGGELFDEIISRK-----RFSEVDAARIIRQVLSGITYMHK--- 167
Query: 530 RKFVHGDIKPSNILLDN---DFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQ 586
K VH D+KP N+LL++ D I DFGLS + G
Sbjct: 168 NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIG-------------- 213
Query: 587 TEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
T Y APE V +K DV+S GV+L LL+G P
Sbjct: 214 ---TAYYIAPE--VLHGTYDEKCDVWSTGVILYILLSGCPP 249
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 129/299 (43%), Gaps = 60/299 (20%)
Query: 415 LGKSGLGIVYKVVLGN--GIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYY 472
+GK G V+LG+ G VAV+ + + + F+ E + +++H N+V+L
Sbjct: 20 IGKGEFG---DVMLGDYRGNKVAVKCIK--NDATAQAFLAEASVMTQLRHSNLVQLLGV- 73
Query: 473 WAPDEK---LLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSP 529
+EK +++++++ G+L + LR R + L L+ + + YL
Sbjct: 74 -IVEEKGGLYIVTEYMAKGSLVDYLRSRG---RSVLGGDCLLKFSLDVCEAMEYLE---G 126
Query: 530 RKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEK 589
FVH D+ N+L+ D +SDFGL++ + T + G LP
Sbjct: 127 NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDT---------GKLPV-------- 169
Query: 590 TNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTSIEVPDLVRWVKK 648
+ APEA K DV+SFG++L E+ + G+ P I + D+V V+K
Sbjct: 170 --KWTAPEALREAAFS-TKSDVWSFGILLWEIYSFGRVP------YPRIPLKDVVPRVEK 220
Query: 649 GFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERIGT 707
G++ + P D AV+ + C D +RP + E LE I T
Sbjct: 221 GYKMDAP--DGCPP-------------AVYEVMKNCWHLDAAMRPSFLQLREQLEHIKT 264
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 93/221 (42%), Gaps = 34/221 (15%)
Query: 414 VLGKSGLGIVY---KVVLGNGIPVAVRRLGEGGEQRHRE-FVTEVQAIAKVKHPNIVKLR 469
VLGK G V + G V V + ++ +E + EVQ + ++ HPNI+KL
Sbjct: 57 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 116
Query: 470 AYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSP 529
++ L+ + + G L + + R S RI + G+ Y+H+
Sbjct: 117 EFFEDKGYFYLVGEVYTGGELFDEIISRK-----RFSEVDAARIIRQVLSGITYMHK--- 168
Query: 530 RKFVHGDIKPSNILLDN---DFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQ 586
K VH D+KP N+LL++ D I DFGLS + G
Sbjct: 169 NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIG-------------- 214
Query: 587 TEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
T Y APE V +K DV+S GV+L LL+G P
Sbjct: 215 ---TAYYIAPE--VLHGTYDEKCDVWSTGVILYILLSGCPP 250
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 126/303 (41%), Gaps = 54/303 (17%)
Query: 415 LGKSGLGIVYKVVLGNGIP-------VAVRRLGE-GGEQRHREFVTEVQAIAKVKHPNIV 466
LG G VY+ + +G+P VAV+ L E EQ +F+ E I+K H NIV
Sbjct: 39 LGHGAFGEVYEGQV-SGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIV 97
Query: 467 KLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPS--TSLSWSTRLRIAKGTARGLAYL 524
+ + ++ + ++ G+L + LR +PS +SL+ L +A+ A G YL
Sbjct: 98 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 157
Query: 525 HECSPRKFVHGDIKPSNILLDND---FQPYISDFGLSRLINITGNNPSSSGGFMGGALPY 581
E F+H DI N LL I DFG+++ +I + GG
Sbjct: 158 EE---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQ--DIYRASYYRKGGCA------ 206
Query: 582 MKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTSIEVP 640
M PV+ + PEA + G K D +SFGV+L E+ + G P S + +E
Sbjct: 207 MLPVK------WMPPEAFMEGIF-TSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLE-- 257
Query: 641 DLVRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSE 700
+V G + P K V+ + C + PE RP + E
Sbjct: 258 ----FVTSGGRMDPP---------------KNCPGPVYRIMTQCWQHQPEDRPNFAIILE 298
Query: 701 NLE 703
+E
Sbjct: 299 RIE 301
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 94/214 (43%), Gaps = 23/214 (10%)
Query: 415 LGKSGLGIVYK-VVLGNGIPVAVRRLGEGGEQ-RHREFVTEVQAIAKVKHPNIVKLRAYY 472
LG VYK + G+ VA++ + E+ + E+ + ++KH NIV+L
Sbjct: 13 LGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVI 72
Query: 473 WAPDEKLLISDFISNGNLANALRGRN-GQPSTSLSWSTRLRIAKGTARGLAYLHECSPRK 531
++ L+ +F+ N +L + R G L + +GLA+ HE K
Sbjct: 73 HTENKLTLVFEFMDN-DLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHE---NK 128
Query: 532 FVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTN 591
+H D+KP N+L++ Q + DFGL+R I N SS T
Sbjct: 129 ILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSE----------------VVTL 172
Query: 592 NYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGK 625
YRAP+ + D++S G +L E++TGK
Sbjct: 173 WYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGK 206
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 87/199 (43%), Gaps = 32/199 (16%)
Query: 434 VAVRRLG-EGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLAN 492
VA++ + E E + E+ + K+KHPNIV L Y + LI +S G L +
Sbjct: 46 VAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFD 105
Query: 493 ALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNIL---LDNDFQ 549
+ + S R+ + YLH+ VH D+KP N+L LD D +
Sbjct: 106 RIVEKGFYTERDAS-----RLIFQVLDAVKYLHDLG---IVHRDLKPENLLYYSLDEDSK 157
Query: 550 PYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKW 609
ISDFGLS++ + G+ S++ G T Y APE V +P K
Sbjct: 158 IMISDFGLSKMED-PGSVLSTACG----------------TPGYVAPE--VLAQKPYSKA 198
Query: 610 -DVYSFGVVLLELLTGKSP 627
D +S GV+ LL G P
Sbjct: 199 VDCWSIGVIAYILLCGYPP 217
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 77/180 (42%), Gaps = 25/180 (13%)
Query: 448 REFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSW 507
++ EV+ + + HPNIVKL LI ++ S G + + L +G+ +
Sbjct: 59 QKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVA-HGRMKEKEAR 117
Query: 508 STRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNN 567
S +I + C ++ VH D+K N+LLD D I+DFG S + G
Sbjct: 118 SKFRQIVSA-------VQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKL 170
Query: 568 PSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
+ GA PY P + + Y PE DV+S GV+L L++G P
Sbjct: 171 DA-----FCGAPPYAAP-ELFQGKKYDGPEV-----------DVWSLGVILYTLVSGSLP 213
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 89/213 (41%), Gaps = 43/213 (20%)
Query: 453 EVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANAL--RGRNGQPSTSLSWSTR 510
E+ + K+KH NIV L Y + L+ +S G L + + RG + SL
Sbjct: 56 EIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASL----- 110
Query: 511 LRIAKGTARGLAYLHECSPRKFVHGDIKPSNILL---DNDFQPYISDFGLSRLINITGNN 567
+ + + YLHE VH D+KP N+L + + + I+DFGLS++
Sbjct: 111 --VIQQVLSAVKYLHE---NGIVHRDLKPENLLYLTPEENSKIMITDFGLSKM------- 158
Query: 568 PSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQK-WDVYSFGVVLLELLTGKS 626
G M A T Y APE V +P K D +S GV+ LL G
Sbjct: 159 --EQNGIMSTAC---------GTPGYVAPE--VLAQKPYSKAVDCWSIGVITYILLCGYP 205
Query: 627 PELSPTTSTSIEVPDLVRWVKKGFEE-ENPLSD 658
P T S L +K+G+ E E+P D
Sbjct: 206 PFYEETES------KLFEKIKEGYYEFESPFWD 232
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 92/213 (43%), Gaps = 27/213 (12%)
Query: 415 LGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWA 474
GK L YK + R+L + + H E+ + ++HP+I+KL
Sbjct: 22 FGKVKLATHYKTQQKVALKFISRQLLKKSDM-HMRVEREISYLKLLRHPHIIKLYDVITT 80
Query: 475 PDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVH 534
P + +++ ++ + G L + + + ++ R + + Y C K VH
Sbjct: 81 PTDIVMVIEY-AGGELFDYIVEKK-----RMTEDEGRRFFQQIICAIEY---CHRHKIVH 131
Query: 535 GDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYR 594
D+KP N+LLD++ I+DFGLS ++ GN +S G + NY
Sbjct: 132 RDLKPENLLLDDNLNVKIADFGLSNIMT-DGNFLKTSCG----------------SPNYA 174
Query: 595 APEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
APE + DV+S G+VL +L G+ P
Sbjct: 175 APEVINGKLYAGPEVDVWSCGIVLYVMLVGRLP 207
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 93/221 (42%), Gaps = 34/221 (15%)
Query: 414 VLGKSGLGIVY---KVVLGNGIPVAVRRLGEGGEQRHRE-FVTEVQAIAKVKHPNIVKLR 469
VLGK G V + G V V + ++ +E + EVQ + ++ HPNI+KL
Sbjct: 39 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 98
Query: 470 AYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSP 529
++ L+ + + G L + + R S RI + G+ Y+H+
Sbjct: 99 EFFEDKGYFYLVGEVYTGGELFDEIISRK-----RFSEVDAARIIRQVLSGITYMHK--- 150
Query: 530 RKFVHGDIKPSNILLDN---DFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQ 586
K VH D+KP N+LL++ D I DFGLS + G
Sbjct: 151 NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIG-------------- 196
Query: 587 TEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
T Y APE V +K DV+S GV+L LL+G P
Sbjct: 197 ---TAYYIAPE--VLHGTYDEKCDVWSTGVILYILLSGCPP 232
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 96/225 (42%), Gaps = 25/225 (11%)
Query: 415 LGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWA 474
LG G+V VA++ + EG EF+ E + + + H +V+L
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 75
Query: 475 PDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVH 534
+I+++++NG L N LR + T L + K + YL ++F+H
Sbjct: 76 QRPIFIITEYMANGCLLNYLREMRHRFQT----QQLLEMCKDVCEAMEYL---ESKQFLH 128
Query: 535 GDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYR 594
D+ N L+++ +SDFGLSR + S F PV+
Sbjct: 129 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKF---------PVRW------- 172
Query: 595 APEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTSIE 638
+P + ++ K D+++FGV++ E+ + GK P T S + E
Sbjct: 173 SPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAE 217
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 96/225 (42%), Gaps = 25/225 (11%)
Query: 415 LGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWA 474
LG G+V VA++ + EG EF+ E + + + H +V+L
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 74
Query: 475 PDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVH 534
+I+++++NG L N LR + T L + K + YL ++F+H
Sbjct: 75 QRPIFIITEYMANGCLLNYLREMRHRFQT----QQLLEMCKDVCEAMEYL---ESKQFLH 127
Query: 535 GDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYR 594
D+ N L+++ +SDFGLSR + S F PV+
Sbjct: 128 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKF---------PVRW------- 171
Query: 595 APEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTSIE 638
+P + ++ K D+++FGV++ E+ + GK P T S + E
Sbjct: 172 SPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAE 216
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 96/225 (42%), Gaps = 25/225 (11%)
Query: 415 LGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWA 474
LG G+V VA++ + EG EF+ E + + + H +V+L
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 90
Query: 475 PDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVH 534
+I+++++NG L N LR + T L + K + YL ++F+H
Sbjct: 91 QRPIFIITEYMANGCLLNYLREMRHRFQT----QQLLEMCKDVCEAMEYL---ESKQFLH 143
Query: 535 GDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYR 594
D+ N L+++ +SDFGLSR + S F PV+
Sbjct: 144 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKF---------PVRW------- 187
Query: 595 APEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTSIE 638
+P + ++ K D+++FGV++ E+ + GK P T S + E
Sbjct: 188 SPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAE 232
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 101/220 (45%), Gaps = 34/220 (15%)
Query: 414 VLGKSGLGIVYKVVLGN-GIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYY 472
V+G G+VY+ L + G VA++++ + ++RE +Q + K+ H NIV+LR ++
Sbjct: 55 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIVRLRYFF 110
Query: 473 WAPDEKL------LISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHE 526
++ EK L+ D++ A + + + + +L + + R LAY+H
Sbjct: 111 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMYQ-LFRSLAYIHS 168
Query: 527 CSPRKFVHGDIKPSNILLDNDFQPY-ISDFGLSRLINITGNNPSSSGGFMGGALPYMKPV 585
H DIKP N+LLD D + DFG ++ + P+ S Y+
Sbjct: 169 FG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVS---------YI--- 211
Query: 586 QTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGK 625
+ YRAPE DV+S G VL ELL G+
Sbjct: 212 ---CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 248
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 87/199 (43%), Gaps = 32/199 (16%)
Query: 434 VAVRRLG-EGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLAN 492
VA++ + E E + E+ + K+KHPNIV L Y + LI +S G L +
Sbjct: 46 VAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFD 105
Query: 493 ALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNIL---LDNDFQ 549
+ + S R+ + YLH+ VH D+KP N+L LD D +
Sbjct: 106 RIVEKGFYTERDAS-----RLIFQVLDAVKYLHDLG---IVHRDLKPENLLYYSLDEDSK 157
Query: 550 PYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKW 609
ISDFGLS++ + G+ S++ G T Y APE V +P K
Sbjct: 158 IMISDFGLSKMED-PGSVLSTACG----------------TPGYVAPE--VLAQKPYSKA 198
Query: 610 -DVYSFGVVLLELLTGKSP 627
D +S GV+ LL G P
Sbjct: 199 VDCWSIGVIAYILLCGYPP 217
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 103/236 (43%), Gaps = 36/236 (15%)
Query: 415 LGKSGLGIVYKVVLGNGIP---VAVRRLGEGGEQRHREFVT-EVQAIAKVKHPNIVKLRA 470
LG+ G G+V++ N + A++R+ + RE V EV+A+AK++HP IV+
Sbjct: 13 LGRGGFGVVFEA--KNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVR--- 67
Query: 471 YY--W------------APDEKLLIS-DFISNGNLANALRGRNGQPSTSLSWSTRLRIAK 515
Y+ W +P L I NL + + GR S L I
Sbjct: 68 YFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVC--LHIFL 125
Query: 516 GTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFM 575
A + +LH + +H D+KPSNI D + DFGL +T + +
Sbjct: 126 QIAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVKVGDFGL-----VTAMDQDEEEQTV 177
Query: 576 GGALP-YMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELS 630
+P Y + T Y +PE ++ GN K D++S G++L ELL S ++
Sbjct: 178 LTPMPAYARHTGQVGTKLYMSPE-QIHGNSYSHKVDIFSLGLILFELLYPFSTQME 232
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 98/220 (44%), Gaps = 34/220 (15%)
Query: 414 VLGKSGLGIVYKVVLGN-GIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYY 472
V+G G+VY+ L + G VA++++ + ++RE +Q + K+ H NIV+LR ++
Sbjct: 39 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIVRLRYFF 94
Query: 473 WAPDEKL------LISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHE 526
++ EK L+ D++ + R + T +L + + R LAY+H
Sbjct: 95 YSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQ-LFRSLAYIHS 152
Query: 527 CSPRKFVHGDIKPSNILLDNDFQPY-ISDFGLSRLINITGNNPSSSGGFMGGALPYMKPV 585
H DIKP N+LLD D + DFG ++ + P+ V
Sbjct: 153 FG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPN---------------V 192
Query: 586 QTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGK 625
+ YRAPE DV+S G VL ELL G+
Sbjct: 193 SXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 96/225 (42%), Gaps = 25/225 (11%)
Query: 415 LGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWA 474
LG G+V VA++ + EG EF+ E + + + H +V+L
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 75
Query: 475 PDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVH 534
+I+++++NG L N LR + T L + K + YL ++F+H
Sbjct: 76 QRPIFIITEYMANGCLLNYLREMRHRFQT----QQLLEMCKDVCEAMEYL---ESKQFLH 128
Query: 535 GDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYR 594
D+ N L+++ +SDFGLSR + S F PV+
Sbjct: 129 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKF---------PVRW------- 172
Query: 595 APEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTSIE 638
+P + ++ K D+++FGV++ E+ + GK P T S + E
Sbjct: 173 SPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAE 217
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 91/212 (42%), Gaps = 26/212 (12%)
Query: 415 LGKSGLGIVYKVVLGNGIPVAVR--RLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYY 472
+G+ G+VYK G A++ RL + E + E+ + ++KH NIVKL
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 473 WAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKF 532
+L+ + + +L L G + + S L++ G A C R+
Sbjct: 70 HTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAY-------CHDRRV 121
Query: 533 VHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNN 592
+H D+KP N+L++ + + I+DFGL+R I P K T
Sbjct: 122 LHRDLKPQNLLINREGELKIADFGLARAFGI----------------PVRKYTHEVVTLW 165
Query: 593 YRAPEARVPGNRPMQKWDVYSFGVVLLELLTG 624
YRAP+ + + D++S G + E++ G
Sbjct: 166 YRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 96/225 (42%), Gaps = 25/225 (11%)
Query: 415 LGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWA 474
LG G+V VA++ + EG EF+ E + + + H +V+L
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 70
Query: 475 PDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVH 534
+I+++++NG L N LR + T L + K + YL ++F+H
Sbjct: 71 QRPIFIITEYMANGCLLNYLREMRHRFQT----QQLLEMCKDVCEAMEYL---ESKQFLH 123
Query: 535 GDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYR 594
D+ N L+++ +SDFGLSR + S F PV+
Sbjct: 124 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKF---------PVRW------- 167
Query: 595 APEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTSIE 638
+P + ++ K D+++FGV++ E+ + GK P T S + E
Sbjct: 168 SPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAE 212
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 92/212 (43%), Gaps = 26/212 (12%)
Query: 415 LGKSGLGIVYKVVLGNGIPVAVR--RLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYY 472
+G+ G+VYK G A++ RL + E + E+ + ++KH NIVKL
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 473 WAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKF 532
+L+ + + + +L L G + + S L++ G A C R+
Sbjct: 70 HTKKRLVLVFEHL-DQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAY-------CHDRRV 121
Query: 533 VHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNN 592
+H D+KP N+L++ + + I+DFGL+R I P K T
Sbjct: 122 LHRDLKPQNLLINREGELKIADFGLARAFGI----------------PVRKYTHEVVTLW 165
Query: 593 YRAPEARVPGNRPMQKWDVYSFGVVLLELLTG 624
YRAP+ + + D++S G + E++ G
Sbjct: 166 YRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 98/220 (44%), Gaps = 34/220 (15%)
Query: 414 VLGKSGLGIVYKVVLGN-GIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYY 472
V+G G+VY+ L + G VA++++ + ++RE +Q + K+ H NIV+LR ++
Sbjct: 28 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIVRLRYFF 83
Query: 473 WAPDEKL------LISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHE 526
++ EK L+ D++ + R + T +L + + R LAY+H
Sbjct: 84 YSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQ-LFRSLAYIHS 141
Query: 527 CSPRKFVHGDIKPSNILLDNDFQPY-ISDFGLSRLINITGNNPSSSGGFMGGALPYMKPV 585
H DIKP N+LLD D + DFG ++ + P+ V
Sbjct: 142 FG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPN---------------V 181
Query: 586 QTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGK 625
+ YRAPE DV+S G VL ELL G+
Sbjct: 182 SXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 221
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 98/220 (44%), Gaps = 34/220 (15%)
Query: 414 VLGKSGLGIVYKVVLGN-GIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYY 472
V+G G+VY+ L + G VA++++ + ++RE +Q + K+ H NIV+LR ++
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIVRLRYFF 82
Query: 473 WAPDEKL------LISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHE 526
++ EK L+ D++ + R + T +L + + R LAY+H
Sbjct: 83 YSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQ-LFRSLAYIHS 140
Query: 527 CSPRKFVHGDIKPSNILLDNDFQPY-ISDFGLSRLINITGNNPSSSGGFMGGALPYMKPV 585
H DIKP N+LLD D + DFG ++ + P+ V
Sbjct: 141 FG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPN---------------V 180
Query: 586 QTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGK 625
+ YRAPE DV+S G VL ELL G+
Sbjct: 181 SXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 102/231 (44%), Gaps = 40/231 (17%)
Query: 414 VLGKSGLGIVYKVVLGNG----IPVAVRRLGEGG---EQRHREFVTEVQAIAK-VKHPNI 465
V+GK G KV+L + AV+ L + ++ + ++E + K VKHP +
Sbjct: 45 VIGKGSFG---KVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFL 101
Query: 466 VKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLH 525
V L + D+ + D+I+ G L L+ + L R A+ A L YLH
Sbjct: 102 VGLHFSFQTADKLYFVLDYINGGELFYHLQ----RERCFLEPRARFYAAE-IASALGYLH 156
Query: 526 ECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPV 585
+ V+ D+KP NILLD+ ++DFGL + NI N S++ F G
Sbjct: 157 SLN---IVYRDLKPENILLDSQGHIVLTDFGLCKE-NIEHN--STTSTFCG--------- 201
Query: 586 QTEKTNNYRAPEA--RVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTS 634
T Y APE + P +R + W G VL E+L G P S T+
Sbjct: 202 ----TPEYLAPEVLHKQPYDRTVDWW---CLGAVLYEMLYGLPPFYSRNTA 245
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 87/199 (43%), Gaps = 32/199 (16%)
Query: 434 VAVRRLG-EGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLAN 492
VA++ + E E + E+ + K+KHPNIV L Y + LI +S G L +
Sbjct: 46 VAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFD 105
Query: 493 ALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNIL---LDNDFQ 549
+ + S R+ + YLH+ VH D+KP N+L LD D +
Sbjct: 106 RIVEKGFYTERDAS-----RLIFQVLDAVKYLHDLG---IVHRDLKPENLLYYSLDEDSK 157
Query: 550 PYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKW 609
ISDFGLS++ + G+ S++ G T Y APE V +P K
Sbjct: 158 IMISDFGLSKMED-PGSVLSTACG----------------TPGYVAPE--VLAQKPYSKA 198
Query: 610 -DVYSFGVVLLELLTGKSP 627
D +S GV+ LL G P
Sbjct: 199 VDCWSIGVIAYILLCGYPP 217
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 98/220 (44%), Gaps = 34/220 (15%)
Query: 414 VLGKSGLGIVYKVVLGN-GIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYY 472
V+G G+VY+ L + G VA++++ + ++RE +Q + K+ H NIV+LR ++
Sbjct: 61 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIVRLRYFF 116
Query: 473 WAPDEKL------LISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHE 526
++ EK L+ D++ + R + T +L + + R LAY+H
Sbjct: 117 YSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQ-LFRSLAYIHS 174
Query: 527 CSPRKFVHGDIKPSNILLDNDFQPY-ISDFGLSRLINITGNNPSSSGGFMGGALPYMKPV 585
H DIKP N+LLD D + DFG ++ + P+ V
Sbjct: 175 FG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPN---------------V 214
Query: 586 QTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGK 625
+ YRAPE DV+S G VL ELL G+
Sbjct: 215 SXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 98/220 (44%), Gaps = 34/220 (15%)
Query: 414 VLGKSGLGIVYKVVLGN-GIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYY 472
V+G G+VY+ L + G VA++++ + ++RE +Q + K+ H NIV+LR ++
Sbjct: 31 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIVRLRYFF 86
Query: 473 WAPDEKL------LISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHE 526
++ EK L+ D++ + R + T +L + + R LAY+H
Sbjct: 87 YSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQ-LFRSLAYIHS 144
Query: 527 CSPRKFVHGDIKPSNILLDNDFQPY-ISDFGLSRLINITGNNPSSSGGFMGGALPYMKPV 585
H DIKP N+LLD D + DFG ++ + P+ V
Sbjct: 145 FG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPN---------------V 184
Query: 586 QTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGK 625
+ YRAPE DV+S G VL ELL G+
Sbjct: 185 SXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 224
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 100/220 (45%), Gaps = 34/220 (15%)
Query: 414 VLGKSGLGIVYKVVLGN-GIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYY 472
V+G G+VY+ L + G VA++++ + ++RE +Q + K+ H NIV+LR ++
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIVRLRYFF 82
Query: 473 WAPDEKL------LISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHE 526
++ EK L+ D++ + R + T +L + + R LAY+H
Sbjct: 83 YSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQ-LFRSLAYIHS 140
Query: 527 CSPRKFVHGDIKPSNILLDNDFQPY-ISDFGLSRLINITGNNPSSSGGFMGGALPYMKPV 585
H DIKP N+LLD D + DFG ++ + P+ S Y+
Sbjct: 141 FG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVS---------YI--- 183
Query: 586 QTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGK 625
+ YRAPE DV+S G VL ELL G+
Sbjct: 184 ---CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 71/173 (41%), Gaps = 22/173 (12%)
Query: 462 HPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGL 521
H N+VK + + + L ++ S G L + + G P R G+
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-----RFFHQLMAGV 117
Query: 522 AYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPY 581
YLH H DIKP N+LLD ISDFGL+ + NN M G LPY
Sbjct: 118 VYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRY--NNRERLLNKMCGTLPY 172
Query: 582 MKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTS 634
+ P ++ + P DV+S G+VL +L G+ P P+ S
Sbjct: 173 VAPELLKRREFHAEPV------------DVWSCGIVLTAMLAGELPWDQPSDS 213
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 91/212 (42%), Gaps = 26/212 (12%)
Query: 415 LGKSGLGIVYKVVLGNGIPVAVR--RLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYY 472
+G+ G+VYK G A++ RL + E + E+ + ++KH NIVKL
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 473 WAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKF 532
+L+ + + +L L G + + S L++ G A C R+
Sbjct: 70 HTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAY-------CHDRRV 121
Query: 533 VHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNN 592
+H D+KP N+L++ + + I+DFGL+R I P K T
Sbjct: 122 LHRDLKPQNLLINREGELKIADFGLARAFGI----------------PVRKYTHEIVTLW 165
Query: 593 YRAPEARVPGNRPMQKWDVYSFGVVLLELLTG 624
YRAP+ + + D++S G + E++ G
Sbjct: 166 YRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 71/173 (41%), Gaps = 22/173 (12%)
Query: 462 HPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGL 521
H N+VK + + + L ++ S G L + + G P R G+
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-----RFFHQLMAGV 117
Query: 522 AYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPY 581
YLH H DIKP N+LLD ISDFGL+ + NN M G LPY
Sbjct: 118 VYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRY--NNRERLLNKMXGTLPY 172
Query: 582 MKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTS 634
+ P ++ + P DV+S G+VL +L G+ P P+ S
Sbjct: 173 VAPELLKRREFHAEPV------------DVWSCGIVLTAMLAGELPWDQPSDS 213
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 71/173 (41%), Gaps = 22/173 (12%)
Query: 462 HPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGL 521
H N+VK + + + L ++ S G L + + G P R G+
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-----RFFHQLMAGV 117
Query: 522 AYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPY 581
YLH H DIKP N+LLD ISDFGL+ + NN M G LPY
Sbjct: 118 VYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRY--NNRERLLNKMXGTLPY 172
Query: 582 MKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTS 634
+ P ++ + P DV+S G+VL +L G+ P P+ S
Sbjct: 173 VAPELLKRREFHAEPV------------DVWSCGIVLTAMLAGELPWDQPSDS 213
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 98/220 (44%), Gaps = 34/220 (15%)
Query: 414 VLGKSGLGIVYKVVLGN-GIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYY 472
V+G G+VY+ L + G VA++++ + ++RE +Q + K+ H NIV+LR ++
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIVRLRYFF 82
Query: 473 WAPDEKL------LISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHE 526
++ EK L+ D++ + R + T +L + + R LAY+H
Sbjct: 83 YSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQ-LFRSLAYIHS 140
Query: 527 CSPRKFVHGDIKPSNILLDNDFQPY-ISDFGLSRLINITGNNPSSSGGFMGGALPYMKPV 585
H DIKP N+LLD D + DFG ++ + P+ V
Sbjct: 141 FG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPN---------------V 180
Query: 586 QTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGK 625
+ YRAPE DV+S G VL ELL G+
Sbjct: 181 SXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 98/220 (44%), Gaps = 34/220 (15%)
Query: 414 VLGKSGLGIVYKVVLGN-GIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYY 472
V+G G+VY+ L + G VA++++ + ++RE +Q + K+ H NIV+LR ++
Sbjct: 39 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIVRLRYFF 94
Query: 473 WAPDEKL------LISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHE 526
++ EK L+ D++ + R + T +L + + R LAY+H
Sbjct: 95 YSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQ-LFRSLAYIHS 152
Query: 527 CSPRKFVHGDIKPSNILLDNDFQPY-ISDFGLSRLINITGNNPSSSGGFMGGALPYMKPV 585
H DIKP N+LLD D + DFG ++ + P+ V
Sbjct: 153 FG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPN---------------V 192
Query: 586 QTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGK 625
+ YRAPE DV+S G VL ELL G+
Sbjct: 193 SXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 74/182 (40%), Gaps = 22/182 (12%)
Query: 453 EVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLR 512
E+ + H N+VK + + + L ++ S G L + + G P R
Sbjct: 55 EIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-----R 109
Query: 513 IAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSG 572
G+ YLH H DIKP N+LLD ISDFGL+ + NN
Sbjct: 110 FFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRY--NNRERLL 164
Query: 573 GFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPT 632
M G LPY+ P ++ + P DV+S G+VL +L G+ P P+
Sbjct: 165 NKMXGTLPYVAPELLKRREFHAEPV------------DVWSCGIVLTAMLAGELPWDQPS 212
Query: 633 TS 634
S
Sbjct: 213 DS 214
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 71/173 (41%), Gaps = 22/173 (12%)
Query: 462 HPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGL 521
H N+VK + + + L ++ S G L + + G P R G+
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-----RFFHQLMAGV 117
Query: 522 AYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPY 581
YLH H DIKP N+LLD ISDFGL+ + NN M G LPY
Sbjct: 118 VYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRY--NNRERLLNKMCGTLPY 172
Query: 582 MKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTS 634
+ P ++ + P DV+S G+VL +L G+ P P+ S
Sbjct: 173 VAPELLKRREFHAEPV------------DVWSCGIVLTAMLAGELPWDQPSDS 213
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 71/173 (41%), Gaps = 22/173 (12%)
Query: 462 HPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGL 521
H N+VK + + + L ++ S G L + + G P R G+
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-----RFFHQLMAGV 117
Query: 522 AYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPY 581
YLH H DIKP N+LLD ISDFGL+ + NN M G LPY
Sbjct: 118 VYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRY--NNRERLLNKMCGTLPY 172
Query: 582 MKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTS 634
+ P ++ + P DV+S G+VL +L G+ P P+ S
Sbjct: 173 VAPELLKRREFHAEPV------------DVWSCGIVLTAMLAGELPWDQPSDS 213
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 100/220 (45%), Gaps = 34/220 (15%)
Query: 414 VLGKSGLGIVYKVVLGN-GIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYY 472
V+G G+VY+ L + G VA++++ + ++RE +Q + K+ H NIV+LR ++
Sbjct: 32 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIVRLRYFF 87
Query: 473 WAPDEKL------LISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHE 526
++ EK L+ D++ + R + T +L + + R LAY+H
Sbjct: 88 YSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQ-LFRSLAYIHS 145
Query: 527 CSPRKFVHGDIKPSNILLDNDFQPY-ISDFGLSRLINITGNNPSSSGGFMGGALPYMKPV 585
H DIKP N+LLD D + DFG ++ + P+ S Y+
Sbjct: 146 FG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVS---------YI--- 188
Query: 586 QTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGK 625
+ YRAPE DV+S G VL ELL G+
Sbjct: 189 ---CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 225
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 71/173 (41%), Gaps = 22/173 (12%)
Query: 462 HPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGL 521
H N+VK + + + L ++ S G L + + G P R G+
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-----RFFHQLMAGV 117
Query: 522 AYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPY 581
YLH H DIKP N+LLD ISDFGL+ + NN M G LPY
Sbjct: 118 VYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRY--NNRERLLNKMCGTLPY 172
Query: 582 MKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTS 634
+ P ++ + P DV+S G+VL +L G+ P P+ S
Sbjct: 173 VAPELLKRREFHAEPV------------DVWSCGIVLTAMLAGELPWDQPSDS 213
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 98/220 (44%), Gaps = 34/220 (15%)
Query: 414 VLGKSGLGIVYKVVLGN-GIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYY 472
V+G G+VY+ L + G VA++++ + ++RE +Q + K+ H NIV+LR ++
Sbjct: 35 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIVRLRYFF 90
Query: 473 WAPDEKL------LISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHE 526
++ EK L+ D++ + R + T +L + + R LAY+H
Sbjct: 91 YSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQ-LFRSLAYIHS 148
Query: 527 CSPRKFVHGDIKPSNILLDNDFQPY-ISDFGLSRLINITGNNPSSSGGFMGGALPYMKPV 585
H DIKP N+LLD D + DFG ++ + P+ V
Sbjct: 149 FG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPN---------------V 188
Query: 586 QTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGK 625
+ YRAPE DV+S G VL ELL G+
Sbjct: 189 SXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 228
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 96/225 (42%), Gaps = 25/225 (11%)
Query: 415 LGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWA 474
LG G+V VA++ + EG EF+ E + + + H +V+L
Sbjct: 23 LGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 81
Query: 475 PDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVH 534
+I+++++NG L N LR + T L + K + YL ++F+H
Sbjct: 82 QRPIFIITEYMANGCLLNYLREMRHRFQT----QQLLEMCKDVCEAMEYL---ESKQFLH 134
Query: 535 GDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYR 594
D+ N L+++ +SDFGLSR + S F PV+
Sbjct: 135 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKF---------PVRW------- 178
Query: 595 APEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTSIE 638
+P + ++ K D+++FGV++ E+ + GK P T S + E
Sbjct: 179 SPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAE 223
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 99/220 (45%), Gaps = 34/220 (15%)
Query: 414 VLGKSGLGIVYKVVLGN-GIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYY 472
V+G G+VY+ L + G VA++++ + ++RE +Q + K+ H NIV+LR ++
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIVRLRYFF 82
Query: 473 WAPDEKL------LISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHE 526
++ EK L+ D++ A + + + + +L + + R LAY+H
Sbjct: 83 YSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMYQ-LFRSLAYIHS 140
Query: 527 CSPRKFVHGDIKPSNILLDNDFQPY-ISDFGLSRLINITGNNPSSSGGFMGGALPYMKPV 585
H DIKP N+LLD D + DFG ++ + P+ V
Sbjct: 141 FG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPN---------------V 180
Query: 586 QTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGK 625
+ YRAPE DV+S G VL ELL G+
Sbjct: 181 SXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 71/173 (41%), Gaps = 22/173 (12%)
Query: 462 HPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGL 521
H N+VK + + + L ++ S G L + + G P R G+
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-----RFFHQLMAGV 117
Query: 522 AYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPY 581
YLH H DIKP N+LLD ISDFGL+ + NN M G LPY
Sbjct: 118 VYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRY--NNRERLLNKMCGTLPY 172
Query: 582 MKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTS 634
+ P ++ + P DV+S G+VL +L G+ P P+ S
Sbjct: 173 VAPELLKRREFHAEPV------------DVWSCGIVLTAMLAGELPWDQPSDS 213
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 98/220 (44%), Gaps = 34/220 (15%)
Query: 414 VLGKSGLGIVYKVVLGN-GIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYY 472
V+G G+VY+ L + G VA++++ + ++RE +Q + K+ H NIV+LR ++
Sbjct: 46 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIVRLRYFF 101
Query: 473 WAPDEKL------LISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHE 526
++ EK L+ D++ + R + T +L + + R LAY+H
Sbjct: 102 YSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQ-LFRSLAYIHS 159
Query: 527 CSPRKFVHGDIKPSNILLDNDFQPY-ISDFGLSRLINITGNNPSSSGGFMGGALPYMKPV 585
H DIKP N+LLD D + DFG ++ + P+ V
Sbjct: 160 FG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPN---------------V 199
Query: 586 QTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGK 625
+ YRAPE DV+S G VL ELL G+
Sbjct: 200 SXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 239
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 71/173 (41%), Gaps = 22/173 (12%)
Query: 462 HPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGL 521
H N+VK + + + L ++ S G L + + G P R G+
Sbjct: 62 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-----RFFHQLMAGV 116
Query: 522 AYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPY 581
YLH H DIKP N+LLD ISDFGL+ + NN M G LPY
Sbjct: 117 VYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRY--NNRERLLNKMCGTLPY 171
Query: 582 MKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTS 634
+ P ++ + P DV+S G+VL +L G+ P P+ S
Sbjct: 172 VAPELLKRREFHAEPV------------DVWSCGIVLTAMLAGELPWDQPSDS 212
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 71/173 (41%), Gaps = 22/173 (12%)
Query: 462 HPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGL 521
H N+VK + + + L ++ S G L + + G P R G+
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-----RFFHQLMAGV 118
Query: 522 AYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPY 581
YLH H DIKP N+LLD ISDFGL+ + NN M G LPY
Sbjct: 119 VYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRY--NNRERLLNKMCGTLPY 173
Query: 582 MKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTS 634
+ P ++ + P DV+S G+VL +L G+ P P+ S
Sbjct: 174 VAPELLKRREFHAEPV------------DVWSCGIVLTAMLAGELPWDQPSDS 214
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 71/173 (41%), Gaps = 22/173 (12%)
Query: 462 HPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGL 521
H N+VK + + + L ++ S G L + + G P R G+
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-----RFFHQLMAGV 118
Query: 522 AYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPY 581
YLH H DIKP N+LLD ISDFGL+ + NN M G LPY
Sbjct: 119 VYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRY--NNRERLLNKMCGTLPY 173
Query: 582 MKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTS 634
+ P ++ + P DV+S G+VL +L G+ P P+ S
Sbjct: 174 VAPELLKRREFHAEPV------------DVWSCGIVLTAMLAGELPWDQPSDS 214
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 71/173 (41%), Gaps = 22/173 (12%)
Query: 462 HPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGL 521
H N+VK + + + L ++ S G L + + G P R G+
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-----RFFHQLMAGV 118
Query: 522 AYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPY 581
YLH H DIKP N+LLD ISDFGL+ + NN M G LPY
Sbjct: 119 VYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRY--NNRERLLNKMCGTLPY 173
Query: 582 MKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTS 634
+ P ++ + P DV+S G+VL +L G+ P P+ S
Sbjct: 174 VAPELLKRREFHAEPV------------DVWSCGIVLTAMLAGELPWDQPSDS 214
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 74/182 (40%), Gaps = 22/182 (12%)
Query: 453 EVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLR 512
E+ + H N+VK + + + L ++ S G L + + G P R
Sbjct: 54 EIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-----R 108
Query: 513 IAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSG 572
G+ YLH H DIKP N+LLD ISDFGL+ + NN
Sbjct: 109 FFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRY--NNRERLL 163
Query: 573 GFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPT 632
M G LPY+ P ++ + P DV+S G+VL +L G+ P P+
Sbjct: 164 NKMXGTLPYVAPELLKRREFHAEPV------------DVWSCGIVLTAMLAGELPWDQPS 211
Query: 633 TS 634
S
Sbjct: 212 DS 213
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 74/182 (40%), Gaps = 22/182 (12%)
Query: 453 EVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLR 512
E+ + H N+VK + + + L ++ S G L + + G P R
Sbjct: 54 EIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-----R 108
Query: 513 IAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSG 572
G+ YLH H DIKP N+LLD ISDFGL+ + NN
Sbjct: 109 FFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRY--NNRERLL 163
Query: 573 GFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPT 632
M G LPY+ P ++ + P DV+S G+VL +L G+ P P+
Sbjct: 164 NKMCGTLPYVAPELLKRREFHAEPV------------DVWSCGIVLTAMLAGELPWDQPS 211
Query: 633 TS 634
S
Sbjct: 212 DS 213
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 100/220 (45%), Gaps = 34/220 (15%)
Query: 414 VLGKSGLGIVYKVVLGN-GIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYY 472
V+G G+VY+ L + G VA++++ + ++RE +Q + K+ H NIV+LR ++
Sbjct: 61 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIVRLRYFF 116
Query: 473 WAPDEKL------LISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHE 526
++ EK L+ D++ + R + T +L + + R LAY+H
Sbjct: 117 YSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQ-LFRSLAYIHS 174
Query: 527 CSPRKFVHGDIKPSNILLDNDFQPY-ISDFGLSRLINITGNNPSSSGGFMGGALPYMKPV 585
H DIKP N+LLD D + DFG ++ + P+ S Y+
Sbjct: 175 FG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVS---------YI--- 217
Query: 586 QTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGK 625
+ YRAPE DV+S G VL ELL G+
Sbjct: 218 ---CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 71/173 (41%), Gaps = 22/173 (12%)
Query: 462 HPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGL 521
H N+VK + + + L ++ S G L + + G P R G+
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-----RFFHQLMAGV 117
Query: 522 AYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPY 581
YLH H DIKP N+LLD ISDFGL+ + NN M G LPY
Sbjct: 118 VYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRY--NNRERLLNKMCGTLPY 172
Query: 582 MKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTS 634
+ P ++ + P DV+S G+VL +L G+ P P+ S
Sbjct: 173 VAPELLKRREFHAEPV------------DVWSCGIVLTAMLAGELPWDQPSDS 213
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 71/173 (41%), Gaps = 22/173 (12%)
Query: 462 HPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGL 521
H N+VK + + + L ++ S G L + + G P R G+
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-----RFFHQLMAGV 118
Query: 522 AYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPY 581
YLH H DIKP N+LLD ISDFGL+ + NN M G LPY
Sbjct: 119 VYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRY--NNRERLLNKMCGTLPY 173
Query: 582 MKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTS 634
+ P ++ + P DV+S G+VL +L G+ P P+ S
Sbjct: 174 VAPELLKRREFHAEPV------------DVWSCGIVLTAMLAGELPWDQPSDS 214
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 100/220 (45%), Gaps = 34/220 (15%)
Query: 414 VLGKSGLGIVYKVVLGN-GIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYY 472
V+G G+VY+ L + G VA++++ + ++RE +Q + K+ H NIV+LR ++
Sbjct: 40 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIVRLRYFF 95
Query: 473 WAPDEKL------LISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHE 526
++ EK L+ D++ + R + T +L + + R LAY+H
Sbjct: 96 YSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQ-LFRSLAYIHS 153
Query: 527 CSPRKFVHGDIKPSNILLDNDFQPY-ISDFGLSRLINITGNNPSSSGGFMGGALPYMKPV 585
H DIKP N+LLD D + DFG ++ + P+ S Y+
Sbjct: 154 FG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVS---------YI--- 196
Query: 586 QTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGK 625
+ YRAPE DV+S G VL ELL G+
Sbjct: 197 ---CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 233
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 71/173 (41%), Gaps = 22/173 (12%)
Query: 462 HPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGL 521
H N+VK + + + L ++ S G L + + G P R G+
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-----RFFHQLMAGV 118
Query: 522 AYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPY 581
YLH H DIKP N+LLD ISDFGL+ + NN M G LPY
Sbjct: 119 VYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRY--NNRERLLNKMCGTLPY 173
Query: 582 MKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTS 634
+ P ++ + P DV+S G+VL +L G+ P P+ S
Sbjct: 174 VAPELLKRREFHAEPV------------DVWSCGIVLTAMLAGELPWDQPSDS 214
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 71/173 (41%), Gaps = 22/173 (12%)
Query: 462 HPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGL 521
H N+VK + + + L ++ S G L + + G P R G+
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-----RFFHQLMAGV 117
Query: 522 AYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPY 581
YLH H DIKP N+LLD ISDFGL+ + NN M G LPY
Sbjct: 118 VYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRY--NNRERLLNKMXGTLPY 172
Query: 582 MKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTS 634
+ P ++ + P DV+S G+VL +L G+ P P+ S
Sbjct: 173 VAPELLKRREFHAEPV------------DVWSCGIVLTAMLAGELPWDQPSDS 213
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 96/225 (42%), Gaps = 25/225 (11%)
Query: 415 LGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWA 474
LG G+V VA++ + EG EF+ E + + + H +V+L
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 90
Query: 475 PDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVH 534
+I+++++NG L N LR + T L + K + YL ++F+H
Sbjct: 91 QRPIFIITEYMANGCLLNYLREMRHRFQT----QQLLEMCKDVCEAMEYL---ESKQFLH 143
Query: 535 GDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYR 594
D+ N L+++ +SDFGLSR + S F PV+
Sbjct: 144 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKF---------PVRW------- 187
Query: 595 APEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTSIE 638
+P + ++ K D+++FGV++ E+ + GK P T S + E
Sbjct: 188 SPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAE 232
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 100/220 (45%), Gaps = 34/220 (15%)
Query: 414 VLGKSGLGIVYKVVLGN-GIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYY 472
V+G G+VY+ L + G VA++++ + ++RE +Q + K+ H NIV+LR ++
Sbjct: 63 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIVRLRYFF 118
Query: 473 WAPDEKL------LISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHE 526
++ EK L+ D++ + R + T +L + + R LAY+H
Sbjct: 119 YSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQ-LFRSLAYIHS 176
Query: 527 CSPRKFVHGDIKPSNILLDNDFQPY-ISDFGLSRLINITGNNPSSSGGFMGGALPYMKPV 585
H DIKP N+LLD D + DFG ++ + P+ S Y+
Sbjct: 177 FG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVS---------YI--- 219
Query: 586 QTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGK 625
+ YRAPE DV+S G VL ELL G+
Sbjct: 220 ---CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 256
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 100/220 (45%), Gaps = 34/220 (15%)
Query: 414 VLGKSGLGIVYKVVLGN-GIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYY 472
V+G G+VY+ L + G VA++++ + ++RE +Q + K+ H NIV+LR ++
Sbjct: 106 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIVRLRYFF 161
Query: 473 WAPDEKL------LISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHE 526
++ EK L+ D++ + R + T +L + + R LAY+H
Sbjct: 162 YSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQ-LFRSLAYIHS 219
Query: 527 CSPRKFVHGDIKPSNILLDNDFQPY-ISDFGLSRLINITGNNPSSSGGFMGGALPYMKPV 585
H DIKP N+LLD D + DFG ++ + P+ S Y+
Sbjct: 220 FG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVS---------YI--- 262
Query: 586 QTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGK 625
+ YRAPE DV+S G VL ELL G+
Sbjct: 263 ---CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 299
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 105/223 (47%), Gaps = 23/223 (10%)
Query: 415 LGKSGLGIVYKVV-LGNGIPVAVRRLGEGGEQR---HREFVTEVQAIAKVK-HPNIVKLR 469
LGK GIV+K + G VAV+++ + + R F E+ + ++ H NIV L
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTF-REIMILTELSGHENIVNLL 75
Query: 470 AYYWAPDEK--LLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHEC 527
A +++ L+ D++ +L +R +P + + + + YLH
Sbjct: 76 NVLRADNDRDVYLVFDYMET-DLHAVIRANILEPVH------KQYVVYQLIKVIKYLHSG 128
Query: 528 SPRKFVHGDIKPSNILLDNDFQPYISDFGLSR-LINI--TGNNPSSSGGFMGGALPYMKP 584
+H D+KPSNILL+ + ++DFGLSR +NI NN S +P
Sbjct: 129 G---LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQP 185
Query: 585 VQTE--KTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGK 625
+ T+ T YRAPE + + + D++S G +L E+L GK
Sbjct: 186 ILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 100/220 (45%), Gaps = 34/220 (15%)
Query: 414 VLGKSGLGIVYKVVLGN-GIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYY 472
V+G G+VY+ L + G VA++++ + ++RE +Q + K+ H NIV+LR ++
Sbjct: 65 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIVRLRYFF 120
Query: 473 WAPDEKL------LISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHE 526
++ EK L+ D++ + R + T +L + + R LAY+H
Sbjct: 121 YSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQ-LFRSLAYIHS 178
Query: 527 CSPRKFVHGDIKPSNILLDNDFQPY-ISDFGLSRLINITGNNPSSSGGFMGGALPYMKPV 585
H DIKP N+LLD D + DFG ++ + P+ S Y+
Sbjct: 179 FG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVS---------YI--- 221
Query: 586 QTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGK 625
+ YRAPE DV+S G VL ELL G+
Sbjct: 222 ---CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 258
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 104/238 (43%), Gaps = 31/238 (13%)
Query: 394 VAIDKGFTFELDELLRASAYVLGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHREFVTE 453
V G T E E+ + V+G G+V++ L VA++++ + ++RE
Sbjct: 27 VLASDGKTGEQREIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRFKNRE---- 82
Query: 454 VQAIAKVKHPNIVKLRAYYWAPDEKL------LISDFISNGNLANALRGRNGQPSTSLSW 507
+Q + VKHPN+V L+A++++ +K L+ +++ + A R T
Sbjct: 83 LQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPE-TVYRASRHYAKLKQTMPML 141
Query: 508 STRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNN 567
+L + + R LAY+H H DIKP N+LLD G+ +LI+
Sbjct: 142 LIKLYMYQ-LLRSLAYIHSIG---ICHRDIKPQNLLLD-------PPSGVLKLIDF---- 186
Query: 568 PSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGK 625
S + P + + + YRAPE D++S G V+ EL+ G+
Sbjct: 187 --GSAKILIAGEPNVSXICSR---YYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQ 239
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 71/173 (41%), Gaps = 22/173 (12%)
Query: 462 HPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGL 521
H N+VK + + + L ++ S G L + + G P R G+
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-----RFFHQLMAGV 118
Query: 522 AYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPY 581
YLH H DIKP N+LLD ISDFGL+ + NN M G LPY
Sbjct: 119 VYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRY--NNRERLLNKMCGTLPY 173
Query: 582 MKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTS 634
+ P ++ + P DV+S G+VL +L G+ P P+ S
Sbjct: 174 VAPELLKRREFHAEPV------------DVWSCGIVLTAMLAGELPWDQPSDS 214
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 94/217 (43%), Gaps = 27/217 (12%)
Query: 415 LGKSGLGIVYKVV-LGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYW 473
+G+ G VY + + G VA+R++ + + + E+ + + K+PNIV Y
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 474 APDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFV 533
DE ++ ++++ G+L + + T + + + + L +LH + +
Sbjct: 89 VGDELWVVMEYLAGGSLTDVV------TETCMDEGQIAAVCRECLQALEFLHS---NQVI 139
Query: 534 HGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNY 593
H +IK NILL D ++DFG I P S PY +
Sbjct: 140 HRNIKSDNILLGMDGSVKLTDFGFCAQI-----TPEQSKRSTMVGTPY-----------W 183
Query: 594 RAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELS 630
APE V K D++S G++ +E++ G+ P L+
Sbjct: 184 MAPEV-VTRKAYGPKVDIWSLGIMAIEMIEGEPPYLN 219
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 71/155 (45%), Gaps = 24/155 (15%)
Query: 477 EKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPR------ 530
E LI+ F G+L + L+G ++W+ +A+ +RGL+YLHE P
Sbjct: 87 ELWLITAFHDKGSLTDYLKG------NIITWNELCHVAETMSRGLSYLHEDVPWCRGEGH 140
Query: 531 --KFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTE 588
H D K N+LL +D ++DFGL+ G P + G + G YM P E
Sbjct: 141 KPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFE-PGKPPGDTHGQV-GTRRYMAPEVLE 198
Query: 589 KTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT 623
N++ + D+Y+ G+VL EL++
Sbjct: 199 GAINFQ--------RDAFLRIDMYAMGLVLWELVS 225
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 71/173 (41%), Gaps = 22/173 (12%)
Query: 462 HPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGL 521
H N+VK + + + L ++ S G L + + G P R G+
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-----RFFHQLMAGV 117
Query: 522 AYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPY 581
YLH H DIKP N+LLD ISDFGL+ + NN M G LPY
Sbjct: 118 VYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRY--NNRERLLNKMCGTLPY 172
Query: 582 MKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTS 634
+ P ++ + P DV+S G+VL +L G+ P P+ S
Sbjct: 173 VAPELLKRREFHAEPV------------DVWSCGIVLTAMLAGELPWDQPSDS 213
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 79/179 (44%), Gaps = 31/179 (17%)
Query: 453 EVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLR 512
E+ + K+KHPNIV L Y + LI +S G L + + + S R
Sbjct: 66 EIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS-----R 120
Query: 513 IAKGTARGLAYLHECSPRKFVHGDIKPSNIL---LDNDFQPYISDFGLSRLINITGNNPS 569
+ + YLH+ VH D+KP N+L LD D + ISDFGLS++ + G+ S
Sbjct: 121 LIFQVLDAVKYLHDLG---IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMED-PGSVLS 176
Query: 570 SSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKW-DVYSFGVVLLELLTGKSP 627
++ G T Y APE V +P K D +S GV+ LL G P
Sbjct: 177 TACG----------------TPGYVAPE--VLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 77/180 (42%), Gaps = 25/180 (13%)
Query: 448 REFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSW 507
++ EV+ + + HPNIVKL LI ++ S G + + L +G+ +
Sbjct: 56 QKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVA-HGRMKEKEAR 114
Query: 508 STRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNN 567
S +I + C ++ VH D+K N+LLD D I+DFG S + G
Sbjct: 115 SKFRQIVSA-------VQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKL 167
Query: 568 PSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
+ G+ PY P + + Y PE DV+S GV+L L++G P
Sbjct: 168 DT-----FCGSPPYAAP-ELFQGKKYDGPEV-----------DVWSLGVILYTLVSGSLP 210
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 78/175 (44%), Gaps = 25/175 (14%)
Query: 453 EVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLR 512
E + +V HP IVKL + + LI DF+ G+L L + +
Sbjct: 76 ERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRL----SKEVMFTEEDVKFY 131
Query: 513 IAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSG 572
+A+ A L +LH ++ D+KP NILLD + ++DFGLS+ + ++ +
Sbjct: 132 LAE-LALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKE---SIDHEKKAY 184
Query: 573 GFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
F G T Y APE V Q D +SFGV++ E+LTG P
Sbjct: 185 SFCG-------------TVEYMAPEV-VNRRGHTQSADWWSFGVLMFEMLTGTLP 225
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 78/175 (44%), Gaps = 25/175 (14%)
Query: 453 EVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLR 512
E + +V HP IVKL + + LI DF+ G+L L + +
Sbjct: 77 ERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRL----SKEVMFTEEDVKFY 132
Query: 513 IAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSG 572
+A+ A L +LH ++ D+KP NILLD + ++DFGLS+ + ++ +
Sbjct: 133 LAE-LALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKE---SIDHEKKAY 185
Query: 573 GFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
F G T Y APE V Q D +SFGV++ E+LTG P
Sbjct: 186 SFCG-------------TVEYMAPEV-VNRRGHTQSADWWSFGVLMFEMLTGTLP 226
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 91/221 (41%), Gaps = 34/221 (15%)
Query: 414 VLGKSGLGIVY---KVVLGNGIPVAVRRLGEGGEQRHRE-FVTEVQAIAKVKHPNIVKLR 469
VLGK G V + G V V + ++ +E + EVQ + ++ HPNI KL
Sbjct: 33 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKLY 92
Query: 470 AYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSP 529
++ L+ + + G L + + R S RI + G+ Y H+
Sbjct: 93 EFFEDKGYFYLVGEVYTGGELFDEIISRK-----RFSEVDAARIIRQVLSGITYXHK--- 144
Query: 530 RKFVHGDIKPSNILLDN---DFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQ 586
K VH D+KP N+LL++ D I DFGLS + G
Sbjct: 145 NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKIG-------------- 190
Query: 587 TEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
T Y APE V +K DV+S GV+L LL+G P
Sbjct: 191 ---TAYYIAPE--VLHGTYDEKCDVWSTGVILYILLSGCPP 226
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 78/175 (44%), Gaps = 25/175 (14%)
Query: 453 EVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLR 512
E + +V HP IVKL + + LI DF+ G+L L + +
Sbjct: 76 ERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRL----SKEVMFTEEDVKFY 131
Query: 513 IAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSG 572
+A+ A L +LH ++ D+KP NILLD + ++DFGLS+ + ++ +
Sbjct: 132 LAE-LALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKE---SIDHEKKAY 184
Query: 573 GFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
F G T Y APE V Q D +SFGV++ E+LTG P
Sbjct: 185 SFCG-------------TVEYMAPEV-VNRRGHTQSADWWSFGVLMFEMLTGTLP 225
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 131/324 (40%), Gaps = 70/324 (21%)
Query: 403 ELDELLRASAYVL-GKSGLGIVYKVVLGNGIPVAVRRLGEGGE-QRHREFVTEVQAIAKV 460
E ++++A+A+ L G++G VAV+ L E R+ ++E + +V
Sbjct: 35 EFGKVVKATAFHLKGRAGY-----------TTVAVKMLKENASPSELRDLLSEFNVLKQV 83
Query: 461 KHPNIVKLRAYYWAPDEKLLISDFISNGNLANALR-GRNGQP------------------ 501
HP+++KL LLI ++ G+L LR R P
Sbjct: 84 NHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPD 143
Query: 502 STSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLI 561
+L+ + A ++G+ YL E K VH D+ NIL+ + ISDFGLSR +
Sbjct: 144 ERALTMGDLISFAWQISQGMQYLAEM---KLVHRDLAARNILVAEGRKMKISDFGLSRDV 200
Query: 562 NITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLEL 621
+ Y+K Q + A E+ Q DV+SFGV+L E+
Sbjct: 201 YEEDS--------------YVKRSQGRIPVKWMAIESLFDHIYTTQS-DVWSFGVLLWEI 245
Query: 622 LTGKSPELSPTTSTSIEVPDLVRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLA 681
+T L I L +K G E P + + M + L
Sbjct: 246 VT-----LGGNPYPGIPPERLFNLLKTGHRMERP-DNCSEEM--------------YRLM 285
Query: 682 LACTEADPEVRPRMKNVSENLERI 705
L C + +P+ RP ++S++LE++
Sbjct: 286 LQCWKQEPDKRPVFADISKDLEKM 309
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 92/227 (40%), Gaps = 44/227 (19%)
Query: 425 KVVLGNGIPVAVRRL-----------------------GEGGEQRHREFVTEVQAIAKVK 461
K +LG G+ VRR E ++ + EV + KV
Sbjct: 9 KEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVS 68
Query: 462 -HPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARG 520
HPNI++L+ Y L+ D + G L + L + +LS +I +
Sbjct: 69 GHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEK-----VTLSEKETRKIMRALLEV 123
Query: 521 LAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALP 580
+ LH+ + VH D+KP NILLD+D ++DFG S + +P + G
Sbjct: 124 ICALHKLN---IVHRDLKPENILLDDDMNIKLTDFGFSCQL-----DPGEKLREVCGTPS 175
Query: 581 YMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
Y+ P E + N P ++ D++S GV++ LL G P
Sbjct: 176 YLAPEIIECSMNDNHPGYG-------KEVDMWSTGVIMYTLLAGSPP 215
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 133/324 (41%), Gaps = 70/324 (21%)
Query: 403 ELDELLRASAYVL-GKSGLGIVYKVVLGNGIPVAVRRLGEGGE-QRHREFVTEVQAIAKV 460
E ++++A+A+ L G++G VAV+ L E R+ ++E + +V
Sbjct: 35 EFGKVVKATAFHLKGRAGY-----------TTVAVKMLKENASPSELRDLLSEFNVLKQV 83
Query: 461 KHPNIVKLRAYYWAPDEKLLISDFISNGNLANALR-GRNGQP------------------ 501
HP+++KL LLI ++ G+L LR R P
Sbjct: 84 NHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPD 143
Query: 502 STSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLI 561
+L+ + A ++G+ YL E K VH D+ NIL+ + ISDFGLSR +
Sbjct: 144 ERALTMGDLISFAWQISQGMQYLAEM---KLVHRDLAARNILVAEGRKMKISDFGLSRDV 200
Query: 562 NITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLEL 621
+ S G + PV+ + A E+ Q DV+SFGV+L E+
Sbjct: 201 YEEDSXVKRSQGRI--------PVK------WMAIESLFDHIYTTQS-DVWSFGVLLWEI 245
Query: 622 LTGKSPELSPTTSTSIEVPDLVRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLA 681
+T L I L +K G E P + + M + L
Sbjct: 246 VT-----LGGNPYPGIPPERLFNLLKTGHRMERP-DNCSEEM--------------YRLM 285
Query: 682 LACTEADPEVRPRMKNVSENLERI 705
L C + +P+ RP ++S++LE++
Sbjct: 286 LQCWKQEPDKRPVFADISKDLEKM 309
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 92/227 (40%), Gaps = 44/227 (19%)
Query: 425 KVVLGNGIPVAVRRL-----------------------GEGGEQRHREFVTEVQAIAKVK 461
K +LG G+ VRR E ++ + EV + KV
Sbjct: 22 KEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVS 81
Query: 462 -HPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARG 520
HPNI++L+ Y L+ D + G L + L + +LS +I +
Sbjct: 82 GHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEK-----VTLSEKETRKIMRALLEV 136
Query: 521 LAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALP 580
+ LH+ + VH D+KP NILLD+D ++DFG S + +P + G
Sbjct: 137 ICALHKLN---IVHRDLKPENILLDDDMNIKLTDFGFSCQL-----DPGEKLRSVCGTPS 188
Query: 581 YMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
Y+ P E + N P ++ D++S GV++ LL G P
Sbjct: 189 YLAPEIIECSMNDNHPGYG-------KEVDMWSTGVIMYTLLAGSPP 228
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 133/324 (41%), Gaps = 70/324 (21%)
Query: 403 ELDELLRASAYVL-GKSGLGIVYKVVLGNGIPVAVRRLGEGGE-QRHREFVTEVQAIAKV 460
E ++++A+A+ L G++G VAV+ L E R+ ++E + +V
Sbjct: 35 EFGKVVKATAFHLKGRAGY-----------TTVAVKMLKENASPSELRDLLSEFNVLKQV 83
Query: 461 KHPNIVKLRAYYWAPDEKLLISDFISNGNLANALR-GRNGQP------------------ 501
HP+++KL LLI ++ G+L LR R P
Sbjct: 84 NHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPD 143
Query: 502 STSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLI 561
+L+ + A ++G+ YL E S VH D+ NIL+ + ISDFGLSR +
Sbjct: 144 ERALTMGDLISFAWQISQGMQYLAEMS---LVHRDLAARNILVAEGRKMKISDFGLSRDV 200
Query: 562 NITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLEL 621
+ S G + PV+ + A E+ Q DV+SFGV+L E+
Sbjct: 201 YEEDSXVKRSQGRI--------PVK------WMAIESLFDHIYTTQS-DVWSFGVLLWEI 245
Query: 622 LTGKSPELSPTTSTSIEVPDLVRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLA 681
+T L I L +K G E P + + M + L
Sbjct: 246 VT-----LGGNPYPGIPPERLFNLLKTGHRMERP-DNCSEEM--------------YRLM 285
Query: 682 LACTEADPEVRPRMKNVSENLERI 705
L C + +P+ RP ++S++LE++
Sbjct: 286 LQCWKQEPDKRPVFADISKDLEKM 309
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 92/227 (40%), Gaps = 44/227 (19%)
Query: 425 KVVLGNGIPVAVRRL-----------------------GEGGEQRHREFVTEVQAIAKVK 461
K +LG G+ VRR E ++ + EV + KV
Sbjct: 22 KEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVS 81
Query: 462 -HPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARG 520
HPNI++L+ Y L+ D + G L + L + +LS +I +
Sbjct: 82 GHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEK-----VTLSEKETRKIMRALLEV 136
Query: 521 LAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALP 580
+ LH+ + VH D+KP NILLD+D ++DFG S + +P + G
Sbjct: 137 ICALHKLN---IVHRDLKPENILLDDDMNIKLTDFGFSCQL-----DPGEKLREVCGTPS 188
Query: 581 YMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
Y+ P E + N P ++ D++S GV++ LL G P
Sbjct: 189 YLAPEIIECSMNDNHPGYG-------KEVDMWSTGVIMYTLLAGSPP 228
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 127/303 (41%), Gaps = 57/303 (18%)
Query: 414 VLGKSGLGIVYK-VVLGNG----IPVAVRRL-GEGGEQRHREFVTEVQAIAKVKHPNIVK 467
VLG G V+K V + G IPV ++ + + G Q + + AI + H +IV+
Sbjct: 20 VLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVR 79
Query: 468 LRAYYWAPDEKL-LISDFISNGNLANALRGRNGQ--PSTSLSWSTRLRIAKGTARGLAYL 524
L P L L++ ++ G+L + +R G P L+W ++ A+G+ YL
Sbjct: 80 LLGL--CPGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQI------AKGMYYL 131
Query: 525 HECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKP 584
E VH ++ N+LL + Q ++DFG++ L+ P +
Sbjct: 132 EE---HGMVHRNLAARNVLLKSPSQVQVADFGVADLL------PPDDKQLLYS------- 175
Query: 585 VQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTSIEVPDLV 643
+ + + A E+ G Q DV+S+GV + EL+T G P + EVPDL
Sbjct: 176 -EAKTPIKWMALESIHFGKYTHQS-DVWSYGVTVWELMTFGAEPYAGLRLA---EVPDL- 229
Query: 644 RWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLE 703
++KG P +D V+ + + C D +RP K ++
Sbjct: 230 --LEKGERLAQPQICTID---------------VYMVMVKCWMIDENIRPTFKELANEFT 272
Query: 704 RIG 706
R+
Sbjct: 273 RMA 275
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 87/192 (45%), Gaps = 29/192 (15%)
Query: 462 HPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGL 521
HPNIVKL + L+ + ++ G L ++ + T S+ I + +
Sbjct: 65 HPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASY-----IMRKLVSAV 119
Query: 522 AYLHECSPRKFVHGDIKPSNILL---DNDFQPYISDFGLSRLINITGNNPSSSGGFMGGA 578
+++H+ VH D+KP N+L +++ + I DFG +RL N P + F
Sbjct: 120 SHMHDVG---VVHRDLKPENLLFTDENDNLEIKIIDFGFARL-KPPDNQPLKTPCF---- 171
Query: 579 LPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTS-TSI 637
T +Y APE + N + D++S GV+L +L+G+ P S S T
Sbjct: 172 -----------TLHYAAPEL-LNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCT 219
Query: 638 EVPDLVRWVKKG 649
++++ +KKG
Sbjct: 220 SAVEIMKKIKKG 231
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 127/303 (41%), Gaps = 57/303 (18%)
Query: 414 VLGKSGLGIVYK-VVLGNG----IPVAVRRL-GEGGEQRHREFVTEVQAIAKVKHPNIVK 467
VLG G V+K V + G IPV ++ + + G Q + + AI + H +IV+
Sbjct: 38 VLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVR 97
Query: 468 LRAYYWAPDEKL-LISDFISNGNLANALRGRNGQ--PSTSLSWSTRLRIAKGTARGLAYL 524
L P L L++ ++ G+L + +R G P L+W ++ A+G+ YL
Sbjct: 98 LLGL--CPGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQI------AKGMYYL 149
Query: 525 HECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKP 584
E VH ++ N+LL + Q ++DFG++ L+ P +
Sbjct: 150 EE---HGMVHRNLAARNVLLKSPSQVQVADFGVADLL------PPDDKQLLYS------- 193
Query: 585 VQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTSIEVPDLV 643
+ + + A E+ G Q DV+S+GV + EL+T G P + EVPDL
Sbjct: 194 -EAKTPIKWMALESIHFGKYTHQS-DVWSYGVTVWELMTFGAEPYAGLRLA---EVPDL- 247
Query: 644 RWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLE 703
++KG P +D V+ + + C D +RP K ++
Sbjct: 248 --LEKGERLAQPQICTID---------------VYMVMVKCWMIDENIRPTFKELANEFT 290
Query: 704 RIG 706
R+
Sbjct: 291 RMA 293
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 86/220 (39%), Gaps = 33/220 (15%)
Query: 414 VLGKSGLGIVYKV---VLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRA 470
+LGK G V K + V V + + EV+ + K+ HPNI+KL
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 471 YYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPR 530
++ + + G L + + R S RI K G+ Y+H+
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEIIKRK-----RFSEHDAARIIKQVFSGITYMHK---H 140
Query: 531 KFVHGDIKPSNILLDN---DFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQT 587
VH D+KP NILL++ D I DFGLS G
Sbjct: 141 NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIG--------------- 185
Query: 588 EKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
T Y APE + G +K DV+S GV+L LL+G P
Sbjct: 186 --TAYYIAPEV-LRGTYD-EKCDVWSAGVILYILLSGTPP 221
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 77/183 (42%), Gaps = 34/183 (18%)
Query: 450 FVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANA--LRGRNGQPSTSLSW 507
+ EV + ++ HPNI+KL ++ L+ + G L + LR + + ++
Sbjct: 51 LLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAV-- 108
Query: 508 STRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDN---DFQPYISDFGLSRLINIT 564
I K G YLH+ VH D+KP N+LL++ D I DFGLS +
Sbjct: 109 -----IMKQVLSGTTYLHK---HNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVG 160
Query: 565 GNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTG 624
G G T Y APE V + +K DV+S GV+L LL G
Sbjct: 161 GKMKERLG-----------------TAYYIAPE--VLRKKYDEKCDVWSCGVILYILLCG 201
Query: 625 KSP 627
P
Sbjct: 202 YPP 204
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 95/228 (41%), Gaps = 28/228 (12%)
Query: 414 VLGKSGLGIVYKV-VLGNGIPVAVRRLGEGGEQRH---REFVTEVQAIAKVKHPNIVKLR 469
+LGK VY+ + G+ VA++ + + + + EV+ ++KHP+I++L
Sbjct: 18 LLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELY 77
Query: 470 AYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSP 529
Y+ + L+ + NG + L+ R S + G+ YLH
Sbjct: 78 NYFEDSNYVYLVLEMCHNGEMNRYLKNR----VKPFSENEARHFMHQIITGMLYLHS--- 130
Query: 530 RKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEK 589
+H D+ SN+LL + I+DFGL+ + +P+ K
Sbjct: 131 HGILHRDLTLSNLLLTRNMNIKIADFGLATQLK----------------MPHEKHYTLCG 174
Query: 590 TNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSI 637
T NY +PE ++ DV+S G + LL G+ P + T ++
Sbjct: 175 TPNYISPEIATRSAHGLES-DVWSLGCMFYTLLIGRPPFDTDTVKNTL 221
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 100/215 (46%), Gaps = 29/215 (13%)
Query: 415 LGKSGLGIVYKVVLG-NGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYW 473
LG+ G VYK + G VA++++ E +E + E+ + + P++VK Y+
Sbjct: 37 LGEGSYGSVYKAIHKETGQIVAIKQVP--VESDLQEIIKEISIMQQCDSPHVVKYYGSYF 94
Query: 474 APDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFV 533
+ ++ ++ G++++ +R RN +L+ I + T +GL YLH RK +
Sbjct: 95 KNTDLWIVMEYCGAGSVSDIIRLRN----KTLTEDEIATILQSTLKGLEYLHFM--RK-I 147
Query: 534 HGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKP-VQTEKTNN 592
H DIK NILL+ + ++DFG++ + + + + G +M P V E N
Sbjct: 148 HRDIKAGNILLNTEGHAKLADFGVAGQL----TDXMAKRNXVIGTPFWMAPEVIQEIGYN 203
Query: 593 YRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
A D++S G+ +E+ GK P
Sbjct: 204 CVA--------------DIWSLGITAIEMAEGKPP 224
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 99/219 (45%), Gaps = 34/219 (15%)
Query: 415 LGKSGLGIVYKVV-LGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYW 473
LG G+V++V G A + + E E+Q ++ ++HP +V L +
Sbjct: 59 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFE 118
Query: 474 APDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFV 533
+E ++I +F+S G L + + + +S + + +GL ++HE + +V
Sbjct: 119 DDNEMVMIYEFMSGGELFEKVADEHNK----MSEDEAVEYMRQVCKGLCHMHENN---YV 171
Query: 534 HGDIKPSNILL----DNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEK 589
H D+KP NI+ N+ + + DFGL+ + +P S G
Sbjct: 172 HLDLKPENIMFTTKRSNELK--LIDFGLTAHL-----DPKQSVKVTTG------------ 212
Query: 590 TNNYRAPEARVPGNRPMQKW-DVYSFGVVLLELLTGKSP 627
T + APE V +P+ + D++S GV+ LL+G SP
Sbjct: 213 TAEFAAPE--VAEGKPVGYYTDMWSVGVLSYILLSGLSP 249
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 107/242 (44%), Gaps = 32/242 (13%)
Query: 430 NGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGN 489
G VAV+++ +QR EV + H N+V + + Y DE ++ +F+ G
Sbjct: 69 TGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGA 128
Query: 490 LANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQ 549
L + + T ++ + R L+YLH + +H DIK +ILL +D +
Sbjct: 129 LTDIV------THTRMNEEQIATVCLSVLRALSYLHN---QGVIHRDIKSDSILLTSDGR 179
Query: 550 PYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPE--ARVPGNRPMQ 607
+SDFG ++ P +G PY + APE +R+P +
Sbjct: 180 IKLSDFGFC--AQVSKEVPKRK-XLVGT--PY-----------WMAPEVISRLPYGTEV- 222
Query: 608 KWDVYSFGVVLLELLTGKSPELS-PTTSTSIEVPD-LVRWVKKGFEEENPLSDMVDAMLL 665
D++S G++++E++ G+ P + P + D L VK + + L +D ML+
Sbjct: 223 --DIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDSLPPRVKDLHKVSSVLRGFLDLMLV 280
Query: 666 QE 667
+E
Sbjct: 281 RE 282
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 77/175 (44%), Gaps = 25/175 (14%)
Query: 453 EVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLR 512
E +A V HP +VKL + + LI DF+ G+L L + +
Sbjct: 80 ERDILADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRL----SKEVMFTEEDVKFY 135
Query: 513 IAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSG 572
+A+ A GL +LH ++ D+KP NILLD + ++DFGLS+ ++ +
Sbjct: 136 LAE-LALGLDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSK---EAIDHEKKAY 188
Query: 573 GFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
F G T Y APE V D +S+GV++ E+LTG P
Sbjct: 189 SFCG-------------TVEYMAPEV-VNRQGHSHSADWWSYGVLMFEMLTGSLP 229
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 78/175 (44%), Gaps = 26/175 (14%)
Query: 453 EVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLR 512
E+ + ++HP+I+KL + DE +++ ++ N L + + R+ +S R
Sbjct: 64 EISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGN-ELFDYIVQRD-----KMSEQEARR 117
Query: 513 IAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSG 572
+ + Y C K VH D+KP N+LLD I+DFGLS ++ GN +S
Sbjct: 118 FFQQIISAVEY---CHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMT-DGNFLKTSC 173
Query: 573 GFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
G + NY APE + DV+S GV+L +L + P
Sbjct: 174 G----------------SPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLP 212
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 99/219 (45%), Gaps = 34/219 (15%)
Query: 415 LGKSGLGIVYKVV-LGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYW 473
LG G+V++V G A + + E E+Q ++ ++HP +V L +
Sbjct: 165 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFE 224
Query: 474 APDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFV 533
+E ++I +F+S G L + + + +S + + +GL ++HE + +V
Sbjct: 225 DDNEMVMIYEFMSGGELFEKVADEHNK----MSEDEAVEYMRQVCKGLCHMHENN---YV 277
Query: 534 HGDIKPSNILL----DNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEK 589
H D+KP NI+ N+ + + DFGL+ + +P S G
Sbjct: 278 HLDLKPENIMFTTKRSNELK--LIDFGLTAHL-----DPKQSVKVTTG------------ 318
Query: 590 TNNYRAPEARVPGNRPMQKW-DVYSFGVVLLELLTGKSP 627
T + APE V +P+ + D++S GV+ LL+G SP
Sbjct: 319 TAEFAAPE--VAEGKPVGYYTDMWSVGVLSYILLSGLSP 355
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 85/220 (38%), Gaps = 33/220 (15%)
Query: 414 VLGKSGLGIVYKV---VLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRA 470
+LGK G V K + V V + + EV+ + K+ HPNI+KL
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 471 YYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPR 530
++ + + G L + + R S RI K G+ Y+H+
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEIIKRK-----RFSEHDAARIIKQVFSGITYMHK---H 140
Query: 531 KFVHGDIKPSNILLDN---DFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQT 587
VH D+KP NILL++ D I DFGLS G
Sbjct: 141 NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIG--------------- 185
Query: 588 EKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
T Y APE V +K DV+S GV+L LL+G P
Sbjct: 186 --TAYYIAPE--VLRGTYDEKCDVWSAGVILYILLSGTPP 221
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 78/175 (44%), Gaps = 26/175 (14%)
Query: 453 EVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLR 512
E+ + ++HP+I+KL + DE +++ ++ N L + + R+ +S R
Sbjct: 54 EISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGN-ELFDYIVQRD-----KMSEQEARR 107
Query: 513 IAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSG 572
+ + Y C K VH D+KP N+LLD I+DFGLS ++ GN +S
Sbjct: 108 FFQQIISAVEY---CHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMT-DGNFLKTSC 163
Query: 573 GFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
G + NY APE + DV+S GV+L +L + P
Sbjct: 164 G----------------SPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLP 202
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 78/175 (44%), Gaps = 26/175 (14%)
Query: 453 EVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLR 512
E+ + ++HP+I+KL + DE +++ ++ N L + + R+ +S R
Sbjct: 58 EISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGN-ELFDYIVQRD-----KMSEQEARR 111
Query: 513 IAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSG 572
+ + Y C K VH D+KP N+LLD I+DFGLS ++ GN +S
Sbjct: 112 FFQQIISAVEY---CHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMT-DGNFLKTSC 167
Query: 573 GFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
G + NY APE + DV+S GV+L +L + P
Sbjct: 168 G----------------SPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLP 206
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 78/175 (44%), Gaps = 26/175 (14%)
Query: 453 EVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLR 512
E+ + ++HP+I+KL + DE +++ ++ N L + + R+ +S R
Sbjct: 63 EISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGN-ELFDYIVQRD-----KMSEQEARR 116
Query: 513 IAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSG 572
+ + Y C K VH D+KP N+LLD I+DFGLS ++ GN +S
Sbjct: 117 FFQQIISAVEY---CHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMT-DGNFLKTSC 172
Query: 573 GFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
G + NY APE + DV+S GV+L +L + P
Sbjct: 173 G----------------SPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLP 211
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 86/197 (43%), Gaps = 19/197 (9%)
Query: 430 NGIPVAVRRLGEGGEQRH-REFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNG 488
N + VA+R++ Q + + + E++ + + +H NI+ + AP + + +I
Sbjct: 51 NKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQD 110
Query: 489 NLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDF 548
+ L + LS RGL Y+H + +H D+KPSN+LL+
Sbjct: 111 LMETDLY--KLLKTQHLSNDHICYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTC 165
Query: 549 QPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQK 608
I DFGL+R+ + GF+ + T YRAPE + +
Sbjct: 166 DLKICDFGLARV----ADPDHDHTGFL---------TEYVATRWYRAPEIMLNSKGYTKS 212
Query: 609 WDVYSFGVVLLELLTGK 625
D++S G +L E+L+ +
Sbjct: 213 IDIWSVGCILAEMLSNR 229
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 77/183 (42%), Gaps = 34/183 (18%)
Query: 450 FVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANA--LRGRNGQPSTSLSW 507
+ EV + ++ HPNI+KL ++ L+ + G L + LR + + ++
Sbjct: 68 LLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAV-- 125
Query: 508 STRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDN---DFQPYISDFGLSRLINIT 564
I K G YLH+ VH D+KP N+LL++ D I DFGLS +
Sbjct: 126 -----IMKQVLSGTTYLHK---HNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVG 177
Query: 565 GNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTG 624
G G T Y APE V + +K DV+S GV+L LL G
Sbjct: 178 GKMKERLG-----------------TAYYIAPE--VLRKKYDEKCDVWSCGVILYILLCG 218
Query: 625 KSP 627
P
Sbjct: 219 YPP 221
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 94/216 (43%), Gaps = 33/216 (15%)
Query: 415 LGKSGLGIVYKVV-LGNGIPVAVRRLGEGGEQ--RHREFVTEVQAIAKVKHPNIVKLRAY 471
+G+ G+V+K G VA+++ E + + + E++ + ++KHPN+V L
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEV 70
Query: 472 YWAPDEKLLISDFISNGNLANALRGRNGQPS---TSLSWSTRLRIAKGTARGLAYLHECS 528
+ L+ ++ + L R + G P S++W T A + H C
Sbjct: 71 FRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTL------QAVNFCHKHNC- 123
Query: 529 PRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTE 588
+H D+KP NIL+ + DFG +RL +TG PS Y V
Sbjct: 124 ----IHRDVKPENILITKHSVIKLCDFGFARL--LTG--PSDY---------YDDEV--- 163
Query: 589 KTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTG 624
T YR+PE V + DV++ G V ELL+G
Sbjct: 164 ATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSG 199
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 85/220 (38%), Gaps = 33/220 (15%)
Query: 414 VLGKSGLGIVYKV---VLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRA 470
+LGK G V K + V V + + EV+ + K+ HPNI+KL
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 471 YYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPR 530
++ + + G L + + R S RI K G+ Y+H+
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEIIKRK-----RFSEHDAARIIKQVFSGITYMHK---H 140
Query: 531 KFVHGDIKPSNILLDN---DFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQT 587
VH D+KP NILL++ D I DFGLS G
Sbjct: 141 NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIG--------------- 185
Query: 588 EKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
T Y APE V +K DV+S GV+L LL+G P
Sbjct: 186 --TAYYIAPE--VLRGTYDEKCDVWSAGVILYILLSGTPP 221
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 88/191 (46%), Gaps = 32/191 (16%)
Query: 440 GEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEK----LLISDFISNGNLANALR 495
G E + V+EV + ++KHPNIV R Y D ++ ++ G+LA+ +
Sbjct: 42 GSMTEAEKQMLVSEVNLLRELKHPNIV--RYYDRIIDRTNTTLYIVMEYCEGGDLASVI- 98
Query: 496 GRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRK-----FVHGDIKPSNILLDNDFQP 550
+ + L LR+ T LA L EC R +H D+KP+N+ LD
Sbjct: 99 TKGTKERQYLDEEFVLRVM--TQLTLA-LKECHRRSDGGHTVLHRDLKPANVFLDGKQNV 155
Query: 551 YISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWD 610
+ DFGL+R++N ++ S + F+G YM P Q R+ N +K D
Sbjct: 156 KLGDFGLARILN---HDTSFAKAFVGTPY-YMSPEQMN----------RMSYN---EKSD 198
Query: 611 VYSFGVVLLEL 621
++S G +L EL
Sbjct: 199 IWSLGCLLYEL 209
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 101/218 (46%), Gaps = 33/218 (15%)
Query: 414 VLGKSGLGIVYK-VVLGNG----IPVAVRRLGEGGEQR-HREFVTEVQAIAKVKHPNIVK 467
VLG G VYK + + G IPVA++ L E + ++E + E +A V +P++ +
Sbjct: 22 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 81
Query: 468 LRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTS--LSWSTRLRIAKGTARGLAYLH 525
L +L I+ + G L + +R + L+W ++ A+G+ YL
Sbjct: 82 LLGICLTSTVQL-ITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYLE 134
Query: 526 ECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPV 585
+ R+ VH D+ N+L+ I+DFGL++L+ + GG + P+
Sbjct: 135 D---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--------PI 183
Query: 586 QTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT 623
+ + A E+ + Q DV+S+GV + EL+T
Sbjct: 184 K------WMALESILHRIYTHQS-DVWSYGVTVWELMT 214
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 103/223 (46%), Gaps = 34/223 (15%)
Query: 414 VLGKSGLGIVYK-VVLGNG----IPVAVRRLGEGGEQR-HREFVTEVQAIAKVKHPNIVK 467
VLG G VYK + + G IPVA++ L E + ++E + E +A V +P++ +
Sbjct: 22 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 81
Query: 468 LRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTS--LSWSTRLRIAKGTARGLAYLH 525
L +L I+ + G L + +R + L+W ++ A+G+ YL
Sbjct: 82 LLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYLE 134
Query: 526 ECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPV 585
+ R+ VH D+ N+L+ I+DFGL++L+ + GG + P+
Sbjct: 135 D---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--------PI 183
Query: 586 QTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKSP 627
+ + A E+ + Q DV+S+GV + EL+T G P
Sbjct: 184 K------WMALESILHRIYTHQS-DVWSYGVTVWELMTFGSKP 219
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 103/223 (46%), Gaps = 34/223 (15%)
Query: 414 VLGKSGLGIVYK-VVLGNG----IPVAVRRLGEGGEQR-HREFVTEVQAIAKVKHPNIVK 467
VLG G VYK + + G IPVA++ L E + ++E + E +A V +P++ +
Sbjct: 16 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 75
Query: 468 LRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTS--LSWSTRLRIAKGTARGLAYLH 525
L +L I+ + G L + +R + L+W ++ A+G+ YL
Sbjct: 76 LLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYLE 128
Query: 526 ECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPV 585
+ R+ VH D+ N+L+ I+DFGL++L+ + GG + P+
Sbjct: 129 D---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--------PI 177
Query: 586 QTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKSP 627
+ + A E+ + Q DV+S+GV + EL+T G P
Sbjct: 178 K------WMALESILHRIYTHQS-DVWSYGVTVWELMTFGSKP 213
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 101/218 (46%), Gaps = 33/218 (15%)
Query: 414 VLGKSGLGIVYK-VVLGNG----IPVAVRRLGEGGEQR-HREFVTEVQAIAKVKHPNIVK 467
VLG G VYK + + G IPVA++ L E + ++E + E +A V +P++ +
Sbjct: 32 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 91
Query: 468 LRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTS--LSWSTRLRIAKGTARGLAYLH 525
L +L I+ + G L + +R + L+W ++ A+G+ YL
Sbjct: 92 LLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYLE 144
Query: 526 ECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPV 585
+ R+ VH D+ N+L+ I+DFGL++L+ + GG + P+
Sbjct: 145 D---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--------PI 193
Query: 586 QTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT 623
+ + A E+ + Q DV+S+GV + EL+T
Sbjct: 194 K------WMALESILHRIYTHQS-DVWSYGVTVWELMT 224
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 101/218 (46%), Gaps = 33/218 (15%)
Query: 414 VLGKSGLGIVYK-VVLGNG----IPVAVRRLGEGGEQR-HREFVTEVQAIAKVKHPNIVK 467
VLG G VYK + + G IPVA++ L E + ++E + E +A V +P++ +
Sbjct: 47 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 106
Query: 468 LRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTS--LSWSTRLRIAKGTARGLAYLH 525
L +L I+ + G L + +R + L+W ++ A+G+ YL
Sbjct: 107 LLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYLE 159
Query: 526 ECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPV 585
+ R+ VH D+ N+L+ I+DFGL++L+ + GG + P+
Sbjct: 160 D---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--------PI 208
Query: 586 QTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT 623
+ + A E+ + Q DV+S+GV + EL+T
Sbjct: 209 K------WMALESILHRIYTHQS-DVWSYGVTVWELMT 239
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 119/265 (44%), Gaps = 36/265 (13%)
Query: 397 DKGFTFELDELLRASAYVLGKSGLGIVYKVVL---GNGIPVAVRRLGEGGEQRH-REFVT 452
DK + D LL A LG G V + V I VA++ L +G E+ E +
Sbjct: 1 DKKLFLKRDNLLIADI-ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMR 59
Query: 453 EVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQ-PSTSLSWSTRL 511
E Q + ++ +P IV+L A + +L+ + G L L G+ + P ++++
Sbjct: 60 EAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGPLHKFLVGKREEIPVSNVA----- 113
Query: 512 RIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSS 571
+ + G+ YL E + FVH D+ N+LL N ISDFGLS+ + G + S
Sbjct: 114 ELLHQVSMGMKYLEE---KNFVHRDLAARNVLLVNRHYAKISDFGLSKAL---GADDSYY 167
Query: 572 GGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELS 630
G P + APE + + + DV+S+GV + E L+ G+ P
Sbjct: 168 TARSAGKWPL----------KWYAPEC-INFRKFSSRSDVWSYGVTMWEALSYGQKP--- 213
Query: 631 PTTSTSIEVPDLVRWVKKGFEEENP 655
++ P+++ ++++G E P
Sbjct: 214 ---YKKMKGPEVMAFIEQGKRMECP 235
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 101/218 (46%), Gaps = 33/218 (15%)
Query: 414 VLGKSGLGIVYK-VVLGNG----IPVAVRRLGEGGEQR-HREFVTEVQAIAKVKHPNIVK 467
VLG G VYK + + G IPVA++ L E + ++E + E +A V +P++ +
Sbjct: 22 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 81
Query: 468 LRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTS--LSWSTRLRIAKGTARGLAYLH 525
L +L I+ + G L + +R + L+W ++ A+G+ YL
Sbjct: 82 LLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYLE 134
Query: 526 ECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPV 585
+ R+ VH D+ N+L+ I+DFGL++L+ + GG + P+
Sbjct: 135 D---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--------PI 183
Query: 586 QTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT 623
+ + A E+ + Q DV+S+GV + EL+T
Sbjct: 184 K------WMALESILHRIYTHQS-DVWSYGVTVWELMT 214
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 101/218 (46%), Gaps = 33/218 (15%)
Query: 414 VLGKSGLGIVYK-VVLGNG----IPVAVRRLGEGGEQR-HREFVTEVQAIAKVKHPNIVK 467
VLG G VYK + + G IPVA++ L E + ++E + E +A V +P++ +
Sbjct: 24 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 83
Query: 468 LRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTS--LSWSTRLRIAKGTARGLAYLH 525
L +L I+ + G L + +R + L+W ++ A+G+ YL
Sbjct: 84 LLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYLE 136
Query: 526 ECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPV 585
+ R+ VH D+ N+L+ I+DFGL++L+ + GG + P+
Sbjct: 137 D---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--------PI 185
Query: 586 QTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT 623
+ + A E+ + Q DV+S+GV + EL+T
Sbjct: 186 K------WMALESILHRIYTHQS-DVWSYGVTVWELMT 216
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 101/218 (46%), Gaps = 33/218 (15%)
Query: 414 VLGKSGLGIVYK-VVLGNG----IPVAVRRLGEGGEQR-HREFVTEVQAIAKVKHPNIVK 467
VLG G VYK + + G IPVA++ L E + ++E + E +A V +P++ +
Sbjct: 25 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 84
Query: 468 LRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTS--LSWSTRLRIAKGTARGLAYLH 525
L +L I+ + G L + +R + L+W ++ A+G+ YL
Sbjct: 85 LLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYLE 137
Query: 526 ECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPV 585
+ R+ VH D+ N+L+ I+DFGL++L+ + GG + P+
Sbjct: 138 D---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--------PI 186
Query: 586 QTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT 623
+ + A E+ + Q DV+S+GV + EL+T
Sbjct: 187 K------WMALESILHRIYTHQS-DVWSYGVTVWELMT 217
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 101/218 (46%), Gaps = 33/218 (15%)
Query: 414 VLGKSGLGIVYK-VVLGNG----IPVAVRRLGEGGEQR-HREFVTEVQAIAKVKHPNIVK 467
VLG G VYK + + G IPVA++ L E + ++E + E +A V +P++ +
Sbjct: 25 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 84
Query: 468 LRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTS--LSWSTRLRIAKGTARGLAYLH 525
L +L I+ + G L + +R + L+W ++ A+G+ YL
Sbjct: 85 LLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYLE 137
Query: 526 ECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPV 585
+ R+ VH D+ N+L+ I+DFGL++L+ + GG + P+
Sbjct: 138 D---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--------PI 186
Query: 586 QTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT 623
+ + A E+ + Q DV+S+GV + EL+T
Sbjct: 187 K------WMALESILHRIYTHQS-DVWSYGVTVWELMT 217
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 101/218 (46%), Gaps = 33/218 (15%)
Query: 414 VLGKSGLGIVYK-VVLGNG----IPVAVRRLGEGGEQR-HREFVTEVQAIAKVKHPNIVK 467
VLG G VYK + + G IPVA++ L E + ++E + E +A V +P++ +
Sbjct: 28 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 87
Query: 468 LRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTS--LSWSTRLRIAKGTARGLAYLH 525
L +L I+ + G L + +R + L+W ++ A+G+ YL
Sbjct: 88 LLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYLE 140
Query: 526 ECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPV 585
+ R+ VH D+ N+L+ I+DFGL++L+ + GG + P+
Sbjct: 141 D---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--------PI 189
Query: 586 QTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT 623
+ + A E+ + Q DV+S+GV + EL+T
Sbjct: 190 K------WMALESILHRIYTHQS-DVWSYGVTVWELMT 220
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 101/218 (46%), Gaps = 33/218 (15%)
Query: 414 VLGKSGLGIVYK-VVLGNG----IPVAVRRLGEGGEQR-HREFVTEVQAIAKVKHPNIVK 467
VLG G VYK + + G IPVA++ L E + ++E + E +A V +P++ +
Sbjct: 29 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 88
Query: 468 LRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTS--LSWSTRLRIAKGTARGLAYLH 525
L +L I+ + G L + +R + L+W ++ A+G+ YL
Sbjct: 89 LLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYLE 141
Query: 526 ECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPV 585
+ R+ VH D+ N+L+ I+DFGL++L+ + GG + P+
Sbjct: 142 D---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--------PI 190
Query: 586 QTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT 623
+ + A E+ + Q DV+S+GV + EL+T
Sbjct: 191 K------WMALESILHRIYTHQS-DVWSYGVTVWELMT 221
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 101/218 (46%), Gaps = 33/218 (15%)
Query: 414 VLGKSGLGIVYK-VVLGNG----IPVAVRRLGEGGEQR-HREFVTEVQAIAKVKHPNIVK 467
VLG G VYK + + G IPVA++ L E + ++E + E +A V +P++ +
Sbjct: 25 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 84
Query: 468 LRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTS--LSWSTRLRIAKGTARGLAYLH 525
L +L I+ + G L + +R + L+W ++ A+G+ YL
Sbjct: 85 LLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYLE 137
Query: 526 ECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPV 585
+ R+ VH D+ N+L+ I+DFGL++L+ + GG + P+
Sbjct: 138 D---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--------PI 186
Query: 586 QTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT 623
+ + A E+ + Q DV+S+GV + EL+T
Sbjct: 187 K------WMALESILHRIYTHQS-DVWSYGVTVWELMT 217
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 90/192 (46%), Gaps = 34/192 (17%)
Query: 440 GEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEK-----LLISDFISNGNLANAL 494
G E + V+EV + ++KHPNIV+ YY ++ ++ ++ G+LA+ +
Sbjct: 42 GSMTEAEKQMLVSEVNLLRELKHPNIVR---YYDRIIDRTNTTLYIVMEYCEGGDLASVI 98
Query: 495 RGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRK-----FVHGDIKPSNILLDNDFQ 549
+ + L LR+ T LA L EC R +H D+KP+N+ LD
Sbjct: 99 -TKGTKERQYLDEEFVLRVM--TQLTLA-LKECHRRSDGGHTVLHRDLKPANVFLDGKQN 154
Query: 550 PYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKW 609
+ DFGL+R++N ++ S + F+G YM P Q R+ N +K
Sbjct: 155 VKLGDFGLARILN---HDTSFAKTFVGTPY-YMSPEQMN----------RMSYN---EKS 197
Query: 610 DVYSFGVVLLEL 621
D++S G +L EL
Sbjct: 198 DIWSLGCLLYEL 209
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 76/182 (41%), Gaps = 29/182 (15%)
Query: 448 REFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANAL--RGRNGQPSTSL 505
++ EV+ + + HPNIVKL L+ ++ S G + + L GR +
Sbjct: 59 QKLFREVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARA 118
Query: 506 SWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITG 565
+ + + Y C + VH D+K N+LLD D I+DFG S + G
Sbjct: 119 KF-------RQIVSAVQY---CHQKYIVHRDLKAENLLLDGDMNIKIADFGFSNEFTV-G 167
Query: 566 NNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGK 625
N + G+ PY P + + Y PE DV+S GV+L L++G
Sbjct: 168 NKLDT----FCGSPPYAAP-ELFQGKKYDGPEV-----------DVWSLGVILYTLVSGS 211
Query: 626 SP 627
P
Sbjct: 212 LP 213
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 87/210 (41%), Gaps = 36/210 (17%)
Query: 453 EVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLR 512
E+ + K+KH NIV L Y +P+ L+ +S G L + + + T ST +R
Sbjct: 70 EIAVLRKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFY--TEKDASTLIR 127
Query: 513 IAKGTARGLAYLHECSPRKFVHGDIKPSNILL---DNDFQPYISDFGLSRLINITGNNPS 569
+ YLH VH D+KP N+L D + + ISDFGLS++
Sbjct: 128 ---QVLDAVYYLHRMG---IVHRDLKPENLLYYSQDEESKIMISDFGLSKM--------E 173
Query: 570 SSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKW-DVYSFGVVLLELLTGKSPE 628
G M A T Y APE V +P K D +S GV+ LL G P
Sbjct: 174 GKGDVMSTACG---------TPGYVAPE--VLAQKPYSKAVDCWSIGVIAYILLCGYPPF 222
Query: 629 LSPTTSTSIEVPDLVRWVKKGFEEENPLSD 658
S E + +K +E ++P D
Sbjct: 223 YDENDSKLFE-----QILKAEYEFDSPYWD 247
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 96/219 (43%), Gaps = 36/219 (16%)
Query: 415 LGKSGLGIVYKVVL-GNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYW 473
LG+ IVY+ G P A++ L + +++ TE+ + ++ HPNI+KL+ +
Sbjct: 61 LGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIVR--TEIGVLLRLSHPNIIKLKEIFE 118
Query: 474 APDEKLLISDFISNGNLANAL--RGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRK 531
P E L+ + ++ G L + + +G + + + K +AYLHE
Sbjct: 119 TPTEISLVLELVTGGELFDRIVEKGYYSERDAADA-------VKQILEAVAYLHE---NG 168
Query: 532 FVHGDIKPSNILLDN---DFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTE 588
VH D+KP N+L D I+DFGLS+++ + G
Sbjct: 169 IVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCG---------------- 212
Query: 589 KTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
T Y APE + G + D++S G++ LL G P
Sbjct: 213 -TPGYCAPEI-LRGCAYGPEVDMWSVGIITYILLCGFEP 249
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 96/230 (41%), Gaps = 34/230 (14%)
Query: 415 LGKSGLGIVYKVV-LGNGIPVAVRRLGEGGEQRHREFV-TEVQAIAKVKHPNIVKLRAYY 472
LG G V+ V +G+ ++ + + Q E + E++ + + HPNI+K+ +
Sbjct: 30 LGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVF 89
Query: 473 WAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKF 532
++ + G L + + +LS + K LAY H +
Sbjct: 90 EDYHNMYIVMETCEGGELLERIVSAQAR-GKALSEGYVAELMKQMMNALAYFH---SQHV 145
Query: 533 VHGDIKPSNILLDNDFQPY----ISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTE 588
VH D+KP NIL D P+ I DFGL+ L ++ +++G
Sbjct: 146 VHKDLKPENILF-QDTSPHSPIKIIDFGLAELFKSDEHSTNAAG---------------- 188
Query: 589 KTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIE 638
T Y APE V K D++S GVV+ LLTG P T TS+E
Sbjct: 189 -TALYMAPE--VFKRDVTFKCDIWSAGVVMYFLLTG----CLPFTGTSLE 231
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 84/190 (44%), Gaps = 32/190 (16%)
Query: 453 EVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLR 512
EV + +++HPN++ L Y + +LI + ++ G L + L + SL+
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKE-----SLTEEEATE 118
Query: 513 IAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQP----YISDFGLSRLINITGNNP 568
K G+ YLH + H D+KP NI+L + P I DFGL+ I+ GN
Sbjct: 119 FLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF-GNEF 174
Query: 569 SSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPM-QKWDVYSFGVVLLELLTGKSP 627
+ G T + APE + P+ + D++S GV+ LL+G SP
Sbjct: 175 KNIFG----------------TPEFVAPE--IVNYEPLGLEADMWSIGVITYILLSGASP 216
Query: 628 ELSPTTSTSI 637
L T ++
Sbjct: 217 FLGDTKQETL 226
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 121/275 (44%), Gaps = 35/275 (12%)
Query: 386 SGKGEGELVAIDKGFTFELDELLRASAYVLGKSGLGIVYKVVL-GNGIPVAVRRLGEGG- 443
SGK G L + + E+++L +G G V+K+ G +AV+++ G
Sbjct: 6 SGKQTGYLTIGGQRYQAEINDLENLGE--MGSGTCGQVWKMRFRKTGHVIAVKQMRRSGN 63
Query: 444 EQRHREFVTEVQAIAKVKH-PNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPS 502
++ ++ + ++ + K P IV+ + + + + + G A L+ R P
Sbjct: 64 KEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELM--GTCAEKLKKRMQGP- 120
Query: 503 TSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLS-RLI 561
+ ++ + L YL E +H D+KPSNILLD Q + DFG+S RL+
Sbjct: 121 --IPERILGKMTVAIVKALYYLKE--KHGVIHRDVKPSNILLDERGQIKLCDFGISGRLV 176
Query: 562 NITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLEL 621
+ + S+ G YM P + + + + P+ + + DV+S G+ L+EL
Sbjct: 177 DDKAKDRSA------GCAAYMAPERIDPPDPTK-PDYDI-------RADVWSLGISLVEL 222
Query: 622 LTGKSPELSPTTSTSIEVPDLVRWVKKGFEEENPL 656
TG+ P T EV + K +EE PL
Sbjct: 223 ATGQFP--YKNCKTDFEV------LTKVLQEEPPL 249
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 84/190 (44%), Gaps = 32/190 (16%)
Query: 453 EVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLR 512
EV + +++HPN++ L Y + +LI + ++ G L + L + SL+
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE-----SLTEEEATE 118
Query: 513 IAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQP----YISDFGLSRLINITGNNP 568
K G+ YLH + H D+KP NI+L + P I DFGL+ I+ GN
Sbjct: 119 FLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF-GNEF 174
Query: 569 SSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPM-QKWDVYSFGVVLLELLTGKSP 627
+ G T + APE + P+ + D++S GV+ LL+G SP
Sbjct: 175 KNIFG----------------TPEFVAPE--IVNYEPLGLEADMWSIGVITYILLSGASP 216
Query: 628 ELSPTTSTSI 637
L T ++
Sbjct: 217 FLGDTKQETL 226
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 84/190 (44%), Gaps = 32/190 (16%)
Query: 453 EVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLR 512
EV + +++HPN++ L Y + +LI + ++ G L + L + SL+
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE-----SLTEEEATE 118
Query: 513 IAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQP----YISDFGLSRLINITGNNP 568
K G+ YLH + H D+KP NI+L + P I DFGL+ I+ GN
Sbjct: 119 FLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF-GNEF 174
Query: 569 SSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPM-QKWDVYSFGVVLLELLTGKSP 627
+ G T + APE + P+ + D++S GV+ LL+G SP
Sbjct: 175 KNIFG----------------TPEFVAPE--IVNYEPLGLEADMWSIGVITYILLSGASP 216
Query: 628 ELSPTTSTSI 637
L T ++
Sbjct: 217 FLGDTKQETL 226
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 113/279 (40%), Gaps = 47/279 (16%)
Query: 434 VAVRRLGEGGEQ-RHREFVTEVQAIAKV-KHPNIVKLRAYYWAPDEKLL-ISDFISNGNL 490
VAV+ L EG HR ++E++ + + H N+V L P L+ I +F GNL
Sbjct: 60 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 119
Query: 491 ANALRGRNGQ-------PSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNIL 543
+ LR + + L+ + + A+G+ +L + RK +H D+ NIL
Sbjct: 120 STYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKXIHRDLAARNIL 176
Query: 544 LDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGN 603
L I DFGL+R I +P Y++ + APE
Sbjct: 177 LSEKNVVKICDFGLARDIY---KDPD-----------YVRKGDARLPLKWMAPETIFDRV 222
Query: 604 RPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVRWVKKGFEEENPLSDMVDAM 663
+Q DV+SFGV+L E+ + + SP I+ + R +K+G P D
Sbjct: 223 YTIQS-DVWSFGVLLWEIFSLGA---SPYPGVKID-EEFCRRLKEGTRMRAP--DYTTPE 275
Query: 664 LLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENL 702
+ Q + L C +P RP + E+L
Sbjct: 276 MYQTM-------------LDCWHGEPSQRPTFSELVEHL 301
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 86/197 (43%), Gaps = 19/197 (9%)
Query: 430 NGIPVAVRRLGEGGEQRH-REFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNG 488
N + VA++++ Q + + + E++ + + +H NI+ + AP + + +I
Sbjct: 51 NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQD 110
Query: 489 NLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDF 548
+ L + LS RGL Y+H + +H D+KPSN+LL+
Sbjct: 111 LMETDLY--KLLKTQHLSNDHICYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTX 165
Query: 549 QPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQK 608
I DFGL+R+ + GF+ + T YRAPE + +
Sbjct: 166 DLKICDFGLARV----ADPDHDHTGFL---------TEYVATRWYRAPEIMLNSKGYTKS 212
Query: 609 WDVYSFGVVLLELLTGK 625
D++S G +L E+L+ +
Sbjct: 213 IDIWSVGCILAEMLSNR 229
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 84/190 (44%), Gaps = 32/190 (16%)
Query: 453 EVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLR 512
EV + +++HPN++ L Y + +LI + ++ G L + L + SL+
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE-----SLTEEEATE 118
Query: 513 IAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQP----YISDFGLSRLINITGNNP 568
K G+ YLH + H D+KP NI+L + P I DFGL+ I+ GN
Sbjct: 119 FLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF-GNEF 174
Query: 569 SSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPM-QKWDVYSFGVVLLELLTGKSP 627
+ G T + APE + P+ + D++S GV+ LL+G SP
Sbjct: 175 KNIFG----------------TPEFVAPE--IVNYEPLGLEADMWSIGVITYILLSGASP 216
Query: 628 ELSPTTSTSI 637
L T ++
Sbjct: 217 FLGDTKQETL 226
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/317 (23%), Positives = 133/317 (41%), Gaps = 67/317 (21%)
Query: 406 ELLRASAYVLGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHRE-FVTEVQAIAKV-KHP 463
+++ A+AY + K+G+ I VAV+ L E + RE ++E++ + ++ H
Sbjct: 60 KVMNATAYGISKTGVSI----------QVAVKMLKEKADSSEREALMSELKMMTQLGSHE 109
Query: 464 NIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTS------------------L 505
NIV L LI ++ G+L N LR + + S L
Sbjct: 110 NIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVL 169
Query: 506 SWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITG 565
++ L A A+G+ +L + VH D+ N+L+ + I DFGL+R I ++
Sbjct: 170 TFEDLLCFAYQVAKGMEFLE---FKSCVHRDLAARNVLVTHGKVVKICDFGLARDI-MSD 225
Query: 566 NNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGK 625
+N G LP + APE+ G + K DV+S+G++L E+
Sbjct: 226 SNYVVRG---NARLPV----------KWMAPESLFEGIYTI-KSDVWSYGILLWEIF--- 268
Query: 626 SPELSPTTSTSIEVPDLVRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACT 685
S ++P ++ + + ++ GF+ + P +A +E+ + +C
Sbjct: 269 SLGVNPYPGIPVD-ANFYKLIQNGFKMDQPF------------YATEEIYIIMQ---SCW 312
Query: 686 EADPEVRPRMKNVSENL 702
D RP N++ L
Sbjct: 313 AFDSRKRPSFPNLTSFL 329
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 100/218 (45%), Gaps = 33/218 (15%)
Query: 414 VLGKSGLGIVYK-VVLGNG----IPVAVRRLGEGGEQR-HREFVTEVQAIAKVKHPNIVK 467
VLG G VYK + + G IPVA++ L E + ++E + E +A V +P++ +
Sbjct: 23 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 82
Query: 468 LRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTS--LSWSTRLRIAKGTARGLAYLH 525
L +L I + G L + +R + L+W ++ A+G+ YL
Sbjct: 83 LLGICLTSTVQL-IMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYLE 135
Query: 526 ECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPV 585
+ R+ VH D+ N+L+ I+DFGL++L+ + GG + P+
Sbjct: 136 D---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--------PI 184
Query: 586 QTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT 623
+ + A E+ + Q DV+S+GV + EL+T
Sbjct: 185 K------WMALESILHRIYTHQS-DVWSYGVTVWELMT 215
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 86/197 (43%), Gaps = 19/197 (9%)
Query: 430 NGIPVAVRRLGEGGEQRH-REFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNG 488
N + VA++++ Q + + + E++ + + +H NI+ + AP + + +I
Sbjct: 47 NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQD 106
Query: 489 NLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDF 548
+ L + LS RGL Y+H + +H D+KPSN+LL+
Sbjct: 107 LMETDLY--KLLKTQHLSNDHICYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTX 161
Query: 549 QPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQK 608
I DFGL+R+ + GF+ + T YRAPE + +
Sbjct: 162 DLKICDFGLARV----ADPDHDHTGFL---------TEYVATRWYRAPEIMLNSKGYTKS 208
Query: 609 WDVYSFGVVLLELLTGK 625
D++S G +L E+L+ +
Sbjct: 209 IDIWSVGCILAEMLSNR 225
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 86/197 (43%), Gaps = 19/197 (9%)
Query: 430 NGIPVAVRRLGEGGEQRH-REFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNG 488
N + VA++++ Q + + + E++ + + +H NI+ + AP + + +I
Sbjct: 45 NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQD 104
Query: 489 NLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDF 548
+ L + LS RGL Y+H + +H D+KPSN+LL+
Sbjct: 105 LMETDLY--KLLKTQHLSNDHICYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTC 159
Query: 549 QPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQK 608
I DFGL+R+ + GF+ + T YRAPE + +
Sbjct: 160 DLKICDFGLARV----ADPDHDHTGFL---------TEYVATRWYRAPEIMLNSKGYTKS 206
Query: 609 WDVYSFGVVLLELLTGK 625
D++S G +L E+L+ +
Sbjct: 207 IDIWSVGCILAEMLSNR 223
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 86/197 (43%), Gaps = 19/197 (9%)
Query: 430 NGIPVAVRRLGEGGEQRH-REFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNG 488
N + VA++++ Q + + + E++ + + +H NI+ + AP + + +I
Sbjct: 55 NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQD 114
Query: 489 NLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDF 548
+ L + LS RGL Y+H + +H D+KPSN+LL+
Sbjct: 115 LMETDLYKL--LKTQHLSNDHICYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTC 169
Query: 549 QPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQK 608
I DFGL+R+ + GF+ + T YRAPE + +
Sbjct: 170 DLKICDFGLARV----ADPDHDHTGFL---------TEYVATRWYRAPEIMLNSKGYTKS 216
Query: 609 WDVYSFGVVLLELLTGK 625
D++S G +L E+L+ +
Sbjct: 217 IDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 86/197 (43%), Gaps = 19/197 (9%)
Query: 430 NGIPVAVRRLGEGGEQRH-REFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNG 488
N + VA++++ Q + + + E++ + + +H NI+ + AP + + +I
Sbjct: 47 NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQD 106
Query: 489 NLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDF 548
+ L + LS RGL Y+H + +H D+KPSN+LL+
Sbjct: 107 LMETDLYKL--LKTQHLSNDHICYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTC 161
Query: 549 QPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQK 608
I DFGL+R+ + GF+ + T YRAPE + +
Sbjct: 162 DLKICDFGLARV----ADPDHDHTGFL---------TEYVATRWYRAPEIMLNSKGYTKS 208
Query: 609 WDVYSFGVVLLELLTGK 625
D++S G +L E+L+ +
Sbjct: 209 IDIWSVGCILAEMLSNR 225
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 86/197 (43%), Gaps = 19/197 (9%)
Query: 430 NGIPVAVRRLGEGGEQRH-REFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNG 488
N + VA++++ Q + + + E++ + + +H NI+ + AP + + +I
Sbjct: 52 NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQD 111
Query: 489 NLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDF 548
+ L + LS RGL Y+H + +H D+KPSN+LL+
Sbjct: 112 LMETDLYKL--LKTQHLSNDHICYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTC 166
Query: 549 QPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQK 608
I DFGL+R+ + GF+ + T YRAPE + +
Sbjct: 167 DLKICDFGLARV----ADPDHDHTGFL---------TEYVATRWYRAPEIMLNSKGYTKS 213
Query: 609 WDVYSFGVVLLELLTGK 625
D++S G +L E+L+ +
Sbjct: 214 IDIWSVGCILAEMLSNR 230
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 86/197 (43%), Gaps = 19/197 (9%)
Query: 430 NGIPVAVRRLGEGGEQRH-REFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNG 488
N + VA++++ Q + + + E++ + + +H NI+ + AP + + +I
Sbjct: 53 NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQD 112
Query: 489 NLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDF 548
+ L + LS RGL Y+H + +H D+KPSN+LL+
Sbjct: 113 LMETDLYKL--LKTQHLSNDHICYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTC 167
Query: 549 QPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQK 608
I DFGL+R+ + GF+ + T YRAPE + +
Sbjct: 168 DLKICDFGLARV----ADPDHDHTGFL---------TEYVATRWYRAPEIMLNSKGYTKS 214
Query: 609 WDVYSFGVVLLELLTGK 625
D++S G +L E+L+ +
Sbjct: 215 IDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 86/197 (43%), Gaps = 19/197 (9%)
Query: 430 NGIPVAVRRLGEGGEQRH-REFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNG 488
N + VA++++ Q + + + E++ + + +H NI+ + AP + + +I
Sbjct: 44 NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQD 103
Query: 489 NLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDF 548
+ L + LS RGL Y+H + +H D+KPSN+LL+
Sbjct: 104 LMETDLYKL--LKTQHLSNDHICYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTC 158
Query: 549 QPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQK 608
I DFGL+R+ + GF+ + T YRAPE + +
Sbjct: 159 DLKICDFGLARV----ADPDHDHTGFL---------TEYVATRWYRAPEIMLNSKGYTKS 205
Query: 609 WDVYSFGVVLLELLTGK 625
D++S G +L E+L+ +
Sbjct: 206 IDIWSVGCILAEMLSNR 222
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 75/182 (41%), Gaps = 29/182 (15%)
Query: 448 REFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANAL--RGRNGQPSTSL 505
++ EV+ + + HPNIVKL L+ ++ S G + + L GR +
Sbjct: 58 QKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARA 117
Query: 506 SWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITG 565
+ + + Y C + VH D+K N+LLD D I+DFG S G
Sbjct: 118 KF-------RQIVSAVQY---CHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTF-G 166
Query: 566 NNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGK 625
N + GA PY P + + Y PE DV+S GV+L L++G
Sbjct: 167 NKLDA----FCGAPPYAAP-ELFQGKKYDGPEV-----------DVWSLGVILYTLVSGS 210
Query: 626 SP 627
P
Sbjct: 211 LP 212
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 86/197 (43%), Gaps = 19/197 (9%)
Query: 430 NGIPVAVRRLGEGGEQRH-REFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNG 488
N + VA++++ Q + + + E++ + + +H NI+ + AP + + +I
Sbjct: 51 NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQD 110
Query: 489 NLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDF 548
+ L + LS RGL Y+H + +H D+KPSN+LL+
Sbjct: 111 LMETDLYKL--LKTQHLSNDHICYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTC 165
Query: 549 QPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQK 608
I DFGL+R+ + GF+ + T YRAPE + +
Sbjct: 166 DLKICDFGLARV----ADPDHDHTGFL---------TEYVATRWYRAPEIMLNSKGYTKS 212
Query: 609 WDVYSFGVVLLELLTGK 625
D++S G +L E+L+ +
Sbjct: 213 IDIWSVGCILAEMLSNR 229
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 84/190 (44%), Gaps = 32/190 (16%)
Query: 453 EVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLR 512
EV + +++HPN++ L Y + +LI + ++ G L + L + SL+
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE-----SLTEEEATE 118
Query: 513 IAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQP----YISDFGLSRLINITGNNP 568
K G+ YLH + H D+KP NI+L + P I DFGL+ I+ GN
Sbjct: 119 FLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF-GNEF 174
Query: 569 SSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPM-QKWDVYSFGVVLLELLTGKSP 627
+ G T + APE + P+ + D++S GV+ LL+G SP
Sbjct: 175 KNIFG----------------TPEFVAPE--IVNYEPLGLEADMWSIGVITYILLSGASP 216
Query: 628 ELSPTTSTSI 637
L T ++
Sbjct: 217 FLGDTKQETL 226
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 86/197 (43%), Gaps = 19/197 (9%)
Query: 430 NGIPVAVRRLGEGGEQRH-REFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNG 488
N + VA++++ Q + + + E++ + + +H NI+ + AP + + +I
Sbjct: 49 NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQD 108
Query: 489 NLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDF 548
+ L + LS RGL Y+H + +H D+KPSN+LL+
Sbjct: 109 LMETDLYKL--LKTQHLSNDHICYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTC 163
Query: 549 QPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQK 608
I DFGL+R+ + GF+ + T YRAPE + +
Sbjct: 164 DLKICDFGLARV----ADPDHDHTGFL---------TEYVATRWYRAPEIMLNSKGYTKS 210
Query: 609 WDVYSFGVVLLELLTGK 625
D++S G +L E+L+ +
Sbjct: 211 IDIWSVGCILAEMLSNR 227
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 86/197 (43%), Gaps = 19/197 (9%)
Query: 430 NGIPVAVRRLGEGGEQRH-REFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNG 488
N + VA++++ Q + + + E++ + + +H NI+ + AP + + +I
Sbjct: 45 NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQD 104
Query: 489 NLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDF 548
+ L + LS RGL Y+H + +H D+KPSN+LL+
Sbjct: 105 LMETDLY--KLLKTQHLSNDHICYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTC 159
Query: 549 QPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQK 608
I DFGL+R+ + GF+ + T YRAPE + +
Sbjct: 160 DLKICDFGLARV----ADPDHDHTGFL---------TEYVATRWYRAPEIMLNSKGYTKS 206
Query: 609 WDVYSFGVVLLELLTGK 625
D++S G +L E+L+ +
Sbjct: 207 IDIWSVGCILAEMLSNR 223
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 84/190 (44%), Gaps = 32/190 (16%)
Query: 453 EVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLR 512
EV + +++HPN++ L Y + +LI + ++ G L + L + SL+
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE-----SLTEEEATE 118
Query: 513 IAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQP----YISDFGLSRLINITGNNP 568
K G+ YLH + H D+KP NI+L + P I DFGL+ I+ GN
Sbjct: 119 FLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF-GNEF 174
Query: 569 SSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPM-QKWDVYSFGVVLLELLTGKSP 627
+ G T + APE + P+ + D++S GV+ LL+G SP
Sbjct: 175 KNIFG----------------TPEFVAPE--IVNYEPLGLEADMWSIGVITYILLSGASP 216
Query: 628 ELSPTTSTSI 637
L T ++
Sbjct: 217 FLGDTKQETL 226
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 86/197 (43%), Gaps = 19/197 (9%)
Query: 430 NGIPVAVRRLGEGGEQRH-REFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNG 488
N + VA++++ Q + + + E++ + + +H NI+ + AP + + +I
Sbjct: 47 NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQD 106
Query: 489 NLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDF 548
+ L + LS RGL Y+H + +H D+KPSN+LL+
Sbjct: 107 LMETDLYKL--LKTQHLSNDHICYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTC 161
Query: 549 QPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQK 608
I DFGL+R+ + GF+ + T YRAPE + +
Sbjct: 162 DLKICDFGLARV----ADPDHDHTGFL---------TEYVATRWYRAPEIMLNSKGYTKS 208
Query: 609 WDVYSFGVVLLELLTGK 625
D++S G +L E+L+ +
Sbjct: 209 IDIWSVGCILAEMLSNR 225
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 86/197 (43%), Gaps = 19/197 (9%)
Query: 430 NGIPVAVRRLGEGGEQRH-REFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNG 488
N + VA++++ Q + + + E++ + + +H NI+ + AP + + +I
Sbjct: 47 NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQD 106
Query: 489 NLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDF 548
+ L + LS RGL Y+H + +H D+KPSN+LL+
Sbjct: 107 LMETDLY--KLLKTQHLSNDHICYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTX 161
Query: 549 QPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQK 608
I DFGL+R+ + GF+ + T YRAPE + +
Sbjct: 162 DLKICDFGLARV----ADPDHDHTGFL---------TEYVATRWYRAPEIMLNSKGYTKS 208
Query: 609 WDVYSFGVVLLELLTGK 625
D++S G +L E+L+ +
Sbjct: 209 IDIWSVGCILAEMLSNR 225
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 84/190 (44%), Gaps = 32/190 (16%)
Query: 453 EVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLR 512
EV + +++HPN++ L Y + +LI + ++ G L + L + SL+
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE-----SLTEEEATE 118
Query: 513 IAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQP----YISDFGLSRLINITGNNP 568
K G+ YLH + H D+KP NI+L + P I DFGL+ I+ GN
Sbjct: 119 FLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF-GNEF 174
Query: 569 SSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPM-QKWDVYSFGVVLLELLTGKSP 627
+ G T + APE + P+ + D++S GV+ LL+G SP
Sbjct: 175 KNIFG----------------TPEFVAPE--IVNYEPLGLEADMWSIGVITYILLSGASP 216
Query: 628 ELSPTTSTSI 637
L T ++
Sbjct: 217 FLGDTKQETL 226
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 86/197 (43%), Gaps = 19/197 (9%)
Query: 430 NGIPVAVRRLGEGGEQRH-REFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNG 488
N + VA++++ Q + + + E++ + + +H NI+ + AP + + +I
Sbjct: 67 NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQD 126
Query: 489 NLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDF 548
+ L + LS RGL Y+H + +H D+KPSN+LL+
Sbjct: 127 LMETDLY--KLLKTQHLSNDHICYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTC 181
Query: 549 QPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQK 608
I DFGL+R+ + GF+ + T YRAPE + +
Sbjct: 182 DLKICDFGLARV----ADPDHDHTGFL---------TEYVATRWYRAPEIMLNSKGYTKS 228
Query: 609 WDVYSFGVVLLELLTGK 625
D++S G +L E+L+ +
Sbjct: 229 IDIWSVGCILAEMLSNR 245
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 84/190 (44%), Gaps = 32/190 (16%)
Query: 453 EVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLR 512
EV + +++HPN++ L Y + +LI + ++ G L + L + SL+
Sbjct: 63 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE-----SLTEEEATE 117
Query: 513 IAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQP----YISDFGLSRLINITGNNP 568
K G+ YLH + H D+KP NI+L + P I DFGL+ I+ GN
Sbjct: 118 FLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF-GNEF 173
Query: 569 SSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPM-QKWDVYSFGVVLLELLTGKSP 627
+ G T + APE + P+ + D++S GV+ LL+G SP
Sbjct: 174 KNIFG----------------TPEFVAPE--IVNYEPLGLEADMWSIGVITYILLSGASP 215
Query: 628 ELSPTTSTSI 637
L T ++
Sbjct: 216 FLGDTKQETL 225
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 86/197 (43%), Gaps = 19/197 (9%)
Query: 430 NGIPVAVRRLGEGGEQRH-REFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNG 488
N + VA++++ Q + + + E++ + + +H NI+ + AP + + +I
Sbjct: 51 NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQD 110
Query: 489 NLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDF 548
+ L + LS RGL Y+H + +H D+KPSN+LL+
Sbjct: 111 LMETDLYKL--LKTQHLSNDHICYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTC 165
Query: 549 QPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQK 608
I DFGL+R+ + GF+ + T YRAPE + +
Sbjct: 166 DLKICDFGLARV----ADPDHDHTGFLX---------EXVATRWYRAPEIMLNSKGYTKS 212
Query: 609 WDVYSFGVVLLELLTGK 625
D++S G +L E+L+ +
Sbjct: 213 IDIWSVGCILAEMLSNR 229
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 84/190 (44%), Gaps = 32/190 (16%)
Query: 453 EVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLR 512
EV + +++HPN++ L Y + +LI + ++ G L + L + SL+
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE-----SLTEEEATE 118
Query: 513 IAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQP----YISDFGLSRLINITGNNP 568
K G+ YLH + H D+KP NI+L + P I DFGL+ I+ GN
Sbjct: 119 FLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF-GNEF 174
Query: 569 SSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPM-QKWDVYSFGVVLLELLTGKSP 627
+ G T + APE + P+ + D++S GV+ LL+G SP
Sbjct: 175 KNIFG----------------TPEFVAPE--IVNYEPLGLEADMWSIGVITYILLSGASP 216
Query: 628 ELSPTTSTSI 637
L T ++
Sbjct: 217 FLGDTKQETL 226
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 86/197 (43%), Gaps = 19/197 (9%)
Query: 430 NGIPVAVRRLGEGGEQRH-REFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNG 488
N + VA++++ Q + + + E++ + + +H NI+ + AP + + +I
Sbjct: 52 NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQD 111
Query: 489 NLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDF 548
+ L + LS RGL Y+H + +H D+KPSN+LL+
Sbjct: 112 LMETDLYKL--LKTQHLSNDHICYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTC 166
Query: 549 QPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQK 608
I DFGL+R+ + GF+ + T YRAPE + +
Sbjct: 167 DLKICDFGLARV----ADPDHDHTGFLX---------EXVATRWYRAPEIMLNSKGYTKS 213
Query: 609 WDVYSFGVVLLELLTGK 625
D++S G +L E+L+ +
Sbjct: 214 IDIWSVGCILAEMLSNR 230
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 100/218 (45%), Gaps = 33/218 (15%)
Query: 414 VLGKSGLGIVYK-VVLGNG----IPVAVRRLGEGGEQR-HREFVTEVQAIAKVKHPNIVK 467
VLG G VYK + + G IPVA++ L E + ++E + E +A V +P++ +
Sbjct: 23 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 82
Query: 468 LRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTS--LSWSTRLRIAKGTARGLAYLH 525
L +L I + G L + +R + L+W ++ A+G+ YL
Sbjct: 83 LLGICLTSTVQL-IMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYLE 135
Query: 526 ECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPV 585
+ R+ VH D+ N+L+ I+DFGL++L+ + GG + P+
Sbjct: 136 D---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--------PI 184
Query: 586 QTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT 623
+ + A E+ + Q DV+S+GV + EL+T
Sbjct: 185 K------WMALESILHRIYTHQS-DVWSYGVTVWELMT 215
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 102/223 (45%), Gaps = 34/223 (15%)
Query: 414 VLGKSGLGIVYK-VVLGNG----IPVAVRRLGEGGEQR-HREFVTEVQAIAKVKHPNIVK 467
VLG G VYK + + G IPVA++ L E + ++E + E +A V +P++ +
Sbjct: 19 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 78
Query: 468 LRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTS--LSWSTRLRIAKGTARGLAYLH 525
L +L I+ + G L + +R + L+W ++ A G+ YL
Sbjct: 79 LLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AEGMNYLE 131
Query: 526 ECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPV 585
+ R+ VH D+ N+L+ I+DFGL++L+ + GG + P+
Sbjct: 132 D---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--------PI 180
Query: 586 QTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKSP 627
+ + A E+ + Q DV+S+GV + EL+T G P
Sbjct: 181 K------WMALESILHRIYTHQS-DVWSYGVTVWELMTFGSKP 216
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 85/193 (44%), Gaps = 30/193 (15%)
Query: 461 KHPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARG 520
+HP + + + + + ++++ G+L + Q S A G
Sbjct: 76 EHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHI-----QSCHKFDLSRATFYAAEIILG 130
Query: 521 LAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALP 580
L +LH + V+ D+K NILLD D I+DFG+ + N+ G+ + + F G
Sbjct: 131 LQFLHS---KGIVYRDLKLDNILLDKDGHIKIADFGMCKE-NMLGD--AKTNXFCG---- 180
Query: 581 YMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP-----ELSPTTST 635
T +Y APE + G + D +SFGV+L E+L G+SP E S
Sbjct: 181 ---------TPDYIAPEILL-GQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSI 230
Query: 636 SIEVPDLVRWVKK 648
++ P RW++K
Sbjct: 231 RMDNPFYPRWLEK 243
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 86/197 (43%), Gaps = 19/197 (9%)
Query: 430 NGIPVAVRRLGEGGEQRH-REFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNG 488
N + VA++++ Q + + + E++ + + +H NI+ + AP + + +I
Sbjct: 51 NKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQD 110
Query: 489 NLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDF 548
+ L + LS RGL Y+H + +H D+KPSN+LL+
Sbjct: 111 LMETDLY--KLLKTQHLSNDHICYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTX 165
Query: 549 QPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQK 608
I DFGL+R+ + GF+ + T YRAPE + +
Sbjct: 166 DLKICDFGLARV----ADPDHDHTGFL---------TEYVATRWYRAPEIMLNSKGYTKS 212
Query: 609 WDVYSFGVVLLELLTGK 625
D++S G +L E+L+ +
Sbjct: 213 IDIWSVGCILAEMLSNR 229
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 100/218 (45%), Gaps = 33/218 (15%)
Query: 414 VLGKSGLGIVYK-VVLGNG----IPVAVRRLGEGGEQR-HREFVTEVQAIAKVKHPNIVK 467
VLG G VYK + + G IPVA++ L E + ++E + E +A V +P++ +
Sbjct: 22 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 81
Query: 468 LRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTS--LSWSTRLRIAKGTARGLAYLH 525
L +L I + G L + +R + L+W ++ A+G+ YL
Sbjct: 82 LLGICLTSTVQL-IMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYLE 134
Query: 526 ECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPV 585
+ R+ VH D+ N+L+ I+DFGL++L+ + GG + P+
Sbjct: 135 D---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--------PI 183
Query: 586 QTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT 623
+ + A E+ + Q DV+S+GV + EL+T
Sbjct: 184 K------WMALESILHRIYTHQS-DVWSYGVTVWELMT 214
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 100/218 (45%), Gaps = 33/218 (15%)
Query: 414 VLGKSGLGIVYK-VVLGNG----IPVAVRRLGEGGEQR-HREFVTEVQAIAKVKHPNIVK 467
VLG G VYK + + G IPVA++ L E + ++E + E +A V +P++ +
Sbjct: 24 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 83
Query: 468 LRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTS--LSWSTRLRIAKGTARGLAYLH 525
L +L I + G L + +R + L+W ++ A+G+ YL
Sbjct: 84 LLGICLTSTVQL-IMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYLE 136
Query: 526 ECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPV 585
+ R+ VH D+ N+L+ I+DFGL++L+ + GG + P+
Sbjct: 137 D---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--------PI 185
Query: 586 QTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT 623
+ + A E+ + Q DV+S+GV + EL+T
Sbjct: 186 K------WMALESILHRIYTHQS-DVWSYGVTVWELMT 216
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 100/218 (45%), Gaps = 33/218 (15%)
Query: 414 VLGKSGLGIVYK-VVLGNG----IPVAVRRLGEGGEQR-HREFVTEVQAIAKVKHPNIVK 467
VLG G VYK + + G IPVA++ L E + ++E + E +A V +P++ +
Sbjct: 26 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 85
Query: 468 LRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTS--LSWSTRLRIAKGTARGLAYLH 525
L +L I + G L + +R + L+W ++ A+G+ YL
Sbjct: 86 LLGICLTSTVQL-IMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYLE 138
Query: 526 ECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPV 585
+ R+ VH D+ N+L+ I+DFGL++L+ + GG + P+
Sbjct: 139 D---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--------PI 187
Query: 586 QTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT 623
+ + A E+ + Q DV+S+GV + EL+T
Sbjct: 188 K------WMALESILHRIYTHQS-DVWSYGVTVWELMT 218
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 84/190 (44%), Gaps = 32/190 (16%)
Query: 453 EVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLR 512
EV + +++HPN++ L Y + +LI + ++ G L + L + SL+
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE-----SLTEEEATE 118
Query: 513 IAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQP----YISDFGLSRLINITGNNP 568
K G+ YLH + H D+KP NI+L + P I DFGL+ I+ GN
Sbjct: 119 FLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF-GNEF 174
Query: 569 SSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPM-QKWDVYSFGVVLLELLTGKSP 627
+ G T + APE + P+ + D++S GV+ LL+G SP
Sbjct: 175 KNIFG----------------TPEFVAPE--IVNYEPLGLEADMWSIGVITYILLSGASP 216
Query: 628 ELSPTTSTSI 637
L T ++
Sbjct: 217 FLGDTKQETL 226
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 100/218 (45%), Gaps = 33/218 (15%)
Query: 414 VLGKSGLGIVYK-VVLGNG----IPVAVRRLGEGGEQR-HREFVTEVQAIAKVKHPNIVK 467
VLG G VYK + + G IPVA++ L E + ++E + E +A V +P++ +
Sbjct: 25 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 84
Query: 468 LRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTS--LSWSTRLRIAKGTARGLAYLH 525
L +L I + G L + +R + L+W ++ A+G+ YL
Sbjct: 85 LLGICLTSTVQL-IMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYLE 137
Query: 526 ECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPV 585
+ R+ VH D+ N+L+ I+DFGL++L+ + GG + P+
Sbjct: 138 D---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--------PI 186
Query: 586 QTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT 623
+ + A E+ + Q DV+S+GV + EL+T
Sbjct: 187 K------WMALESILHRIYTHQS-DVWSYGVTVWELMT 217
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 84/190 (44%), Gaps = 32/190 (16%)
Query: 453 EVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLR 512
EV + +++HPN++ L Y + +LI + ++ G L + L + SL+
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE-----SLTEEEATE 118
Query: 513 IAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQP----YISDFGLSRLINITGNNP 568
K G+ YLH + H D+KP NI+L + P I DFGL+ I+ GN
Sbjct: 119 FLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF-GNEF 174
Query: 569 SSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPM-QKWDVYSFGVVLLELLTGKSP 627
+ G T + APE + P+ + D++S GV+ LL+G SP
Sbjct: 175 KNIFG----------------TPEFVAPE--IVNYEPLGLEADMWSIGVITYILLSGASP 216
Query: 628 ELSPTTSTSI 637
L T ++
Sbjct: 217 FLGDTKQETL 226
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 74/180 (41%), Gaps = 25/180 (13%)
Query: 448 REFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSW 507
++ EV+ + + HPNIVKL L+ ++ S G + + L + W
Sbjct: 51 QKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL--------VAHGW 102
Query: 508 STRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNN 567
+ ++ + C + VH D+K N+LLD D I+DFG S GN
Sbjct: 103 MKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTF-GNK 161
Query: 568 PSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
+ G+ PY P + + Y PE DV+S GV+L L++G P
Sbjct: 162 LDT----FCGSPPYAAP-ELFQGKKYDGPEV-----------DVWSLGVILYTLVSGSLP 205
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 85/193 (44%), Gaps = 30/193 (15%)
Query: 461 KHPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARG 520
+HP + + + + + ++++ G+L + Q S A G
Sbjct: 77 EHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHI-----QSCHKFDLSRATFYAAEIILG 131
Query: 521 LAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALP 580
L +LH + V+ D+K NILLD D I+DFG+ + N+ G+ + + F G
Sbjct: 132 LQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKE-NMLGD--AKTNEFCG---- 181
Query: 581 YMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP-----ELSPTTST 635
T +Y APE + G + D +SFGV+L E+L G+SP E S
Sbjct: 182 ---------TPDYIAPEILL-GQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSI 231
Query: 636 SIEVPDLVRWVKK 648
++ P RW++K
Sbjct: 232 RMDNPFYPRWLEK 244
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 113/279 (40%), Gaps = 47/279 (16%)
Query: 434 VAVRRLGEGGEQ-RHREFVTEVQAIAKV-KHPNIVKLRAYYWAPDEKLL-ISDFISNGNL 490
VAV+ L EG HR ++E++ + + H N+V L P L+ I +F GNL
Sbjct: 60 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 119
Query: 491 ANALRGRNGQ-------PSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNIL 543
+ LR + + L+ + + A+G+ +L + RK +H D+ NIL
Sbjct: 120 STYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVAKGMEFL---ASRKXIHRDLAARNIL 176
Query: 544 LDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGN 603
L I DFGL+R I +P Y++ + APE
Sbjct: 177 LSEKNVVKIXDFGLARDIY---KDPD-----------YVRKGDARLPLKWMAPETIFDRV 222
Query: 604 RPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVRWVKKGFEEENPLSDMVDAM 663
+Q DV+SFGV+L E+ + + SP I+ + R +K+G P D
Sbjct: 223 YTIQS-DVWSFGVLLWEIFSLGA---SPYPGVKID-EEFXRRLKEGTRMRAP--DYTTPE 275
Query: 664 LLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENL 702
+ Q + L C +P RP + E+L
Sbjct: 276 MYQTM-------------LDCWHGEPSQRPTFSELVEHL 301
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 96/219 (43%), Gaps = 34/219 (15%)
Query: 415 LGKSGLGIVYKVV-LGNGIPVAVRRLGEGGEQ---RHREFVTEVQAIAKVKHPNIVKLRA 470
+G G VY + N VA++++ G+Q + ++ + EV+ + K++HPN ++ R
Sbjct: 23 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 82
Query: 471 YYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPR 530
Y L+ ++ A+ L + +P + + + G +GLAYLH
Sbjct: 83 CYLREHTAWLVMEYCLGS--ASDLLEVHKKPLQEVEIAA---VTHGALQGLAYLHS---H 134
Query: 531 KFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKT 590
+H D+K NILL + DFG + ++ + + F+G PY
Sbjct: 135 NMIHRDVKAGNILLSEPGLVKLGDFGSASIM-------APANXFVGT--PY--------- 176
Query: 591 NNYRAPEARVPGNRPMQ--KWDVYSFGVVLLELLTGKSP 627
+ APE + + K DV+S G+ +EL K P
Sbjct: 177 --WMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPP 213
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 84/190 (44%), Gaps = 32/190 (16%)
Query: 453 EVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLR 512
EV + +++HPN++ L Y + +LI + ++ G L + L + SL+
Sbjct: 63 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE-----SLTEEEATE 117
Query: 513 IAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQP----YISDFGLSRLINITGNNP 568
K G+ YLH + H D+KP NI+L + P I DFGL+ I+ GN
Sbjct: 118 FLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF-GNEF 173
Query: 569 SSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPM-QKWDVYSFGVVLLELLTGKSP 627
+ G T + APE + P+ + D++S GV+ LL+G SP
Sbjct: 174 KNIFG----------------TPEFVAPE--IVNYEPLGLEADMWSIGVITYILLSGASP 215
Query: 628 ELSPTTSTSI 637
L T ++
Sbjct: 216 FLGDTKQETL 225
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 114/283 (40%), Gaps = 51/283 (18%)
Query: 434 VAVRRLGEGGEQ-RHREFVTEVQAIAKV-KHPNIVKLRAYYWAPDEKLL-ISDFISNGNL 490
VAV+ L EG HR ++E++ + + H N+V L P L+ I++F GNL
Sbjct: 51 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNL 110
Query: 491 ANALRGRNGQ-----------PSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKP 539
+ LR + + L+ + + A+G+ +L + RK +H D+
Sbjct: 111 STYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAA 167
Query: 540 SNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEAR 599
NILL I DFGL+R I +P Y++ + APE
Sbjct: 168 RNILLSEKNVVKICDFGLARDIY---KDPD-----------YVRKGDARLPLKWMAPETI 213
Query: 600 VPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVRWVKKGFEEENPLSDM 659
+Q DV+SFGV+L E+ + + SP I+ + R +K+G P D
Sbjct: 214 FDRVYTIQS-DVWSFGVLLWEIFSLGA---SPYPGVKID-EEFCRRLKEGTRMRAP--DY 266
Query: 660 VDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENL 702
+ Q + L C +P RP + E+L
Sbjct: 267 TTPEMYQTM-------------LDCWHGEPSQRPTFSELVEHL 296
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 96/219 (43%), Gaps = 34/219 (15%)
Query: 415 LGKSGLGIVYKVV-LGNGIPVAVRRLGEGGEQ---RHREFVTEVQAIAKVKHPNIVKLRA 470
+G G VY + N VA++++ G+Q + ++ + EV+ + K++HPN ++ R
Sbjct: 62 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 121
Query: 471 YYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPR 530
Y L+ ++ A+ L + +P + + + G +GLAYLH
Sbjct: 122 CYLREHTAWLVMEYCLGS--ASDLLEVHKKPLQEVEIAA---VTHGALQGLAYLHS---H 173
Query: 531 KFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKT 590
+H D+K NILL + DFG + ++ + + F+G PY
Sbjct: 174 NMIHRDVKAGNILLSEPGLVKLGDFGSASIM-------APANXFVGT--PY--------- 215
Query: 591 NNYRAPEARVPGNRPMQ--KWDVYSFGVVLLELLTGKSP 627
+ APE + + K DV+S G+ +EL K P
Sbjct: 216 --WMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPP 252
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 86/197 (43%), Gaps = 19/197 (9%)
Query: 430 NGIPVAVRRLGEGGEQRH-REFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNG 488
N + VA++++ Q + + + E++ + + +H NI+ + AP + + +I
Sbjct: 47 NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQD 106
Query: 489 NLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDF 548
+ L + LS RGL Y+H + +H D+KPSN+LL+
Sbjct: 107 LMETDLY--KLLKTQHLSNDHICYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTX 161
Query: 549 QPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQK 608
I DFGL+R+ + GF+ + T YRAPE + +
Sbjct: 162 DLKIXDFGLARV----ADPDHDHTGFL---------TEYVATRWYRAPEIMLNSKGYTKS 208
Query: 609 WDVYSFGVVLLELLTGK 625
D++S G +L E+L+ +
Sbjct: 209 IDIWSVGCILAEMLSNR 225
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 90/201 (44%), Gaps = 26/201 (12%)
Query: 430 NGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGN 489
+G VAV+ + +QR EV + +H N+V++ Y +E ++ +F+ G
Sbjct: 69 SGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGA 128
Query: 490 LANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQ 549
L + + L+ + + + LAYLH + +H DIK +ILL D +
Sbjct: 129 LTDIV------SQVRLNEEQIATVCEAVLQALAYLH---AQGVIHRDIKSDSILLTLDGR 179
Query: 550 PYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKW 609
+SDFG I+ + P +G PY + APE + + +
Sbjct: 180 VKLSDFGFC--AQISKDVPKRK-XLVGT--PY-----------WMAPEV-ISRSLYATEV 222
Query: 610 DVYSFGVVLLELLTGKSPELS 630
D++S G++++E++ G+ P S
Sbjct: 223 DIWSLGIMVIEMVDGEPPYFS 243
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 112/275 (40%), Gaps = 54/275 (19%)
Query: 368 VNGFRNEDSEVEDQEKVESGKGEGELVAIDKGFTFELDELLRASAYVLGKSGLGIVYKVV 427
++ FR ED VED ++ G G+ + K + G G Y
Sbjct: 2 MSTFRQED--VEDHYEMGEELGSGQFAIVRK----------------CRQKGTGKEYAAK 43
Query: 428 LGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISN 487
++ R G E+ RE V + +++HPNI+ L + + +LI + +S
Sbjct: 44 FIKKRRLSSSRRGVSREEIERE----VNILREIRHPNIITLHDIFENKTDVVLILELVSG 99
Query: 488 GNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDND 547
G L + L + SL+ + K G+ YLH ++ H D+KP NI+L +
Sbjct: 100 GELFDFLAEKE-----SLTEDEATQFLKQILDGVHYLH---SKRIAHFDLKPENIMLLDK 151
Query: 548 FQP----YISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGN 603
P + DFG++ I GN + G T + APE +
Sbjct: 152 NVPNPRIKLIDFGIAHKIE-AGNEFKNIFG----------------TPEFVAPE--IVNY 192
Query: 604 RPM-QKWDVYSFGVVLLELLTGKSPELSPTTSTSI 637
P+ + D++S GV+ LL+G SP L T ++
Sbjct: 193 EPLGLEADMWSIGVITYILLSGASPFLGETKQETL 227
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 80/182 (43%), Gaps = 26/182 (14%)
Query: 450 FVTEVQAIAKVKHPNIVKLRAYYWA--PDEKL--LISDFISNGNLANALRGRNGQPSTSL 505
F E Q A + HP IV + A A P L ++ +++ L + + +
Sbjct: 59 FRREAQNAAALNHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG-----PM 113
Query: 506 SWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITG 565
+ + + + L + H+ +H D+KP+NI++ + DFG++R I +G
Sbjct: 114 TPKRAIEVIADACQALNFSHQ---NGIIHRDVKPANIMISATNAVKVMDFGIARAIADSG 170
Query: 566 NNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGK 625
N+ + + +G A Y+ P Q G+ + DVYS G VL E+LTG+
Sbjct: 171 NSVTQTAAVIGTA-QYLSPEQAR-------------GDSVDARSDVYSLGCVLYEVLTGE 216
Query: 626 SP 627
P
Sbjct: 217 PP 218
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 61/128 (47%), Gaps = 24/128 (18%)
Query: 519 RGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGA 578
RGL Y+H +H D+KPSN+ ++ D + I DFGL+R + GF+
Sbjct: 136 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR------HTDDEMAGFVA-- 184
Query: 579 LPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIE 638
T YRAPE + Q D++S G ++ ELLTG++ L P T +
Sbjct: 185 -----------TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT--LFPGTDHIDQ 231
Query: 639 VPDLVRWV 646
+ ++R V
Sbjct: 232 LKLILRLV 239
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 116/259 (44%), Gaps = 36/259 (13%)
Query: 378 VEDQEKVESGKGEGELVAIDKGFTFELDELLRASAYVLGKSGLGIVYK-VVLGNG----I 432
++++E VE GE A ++ L E VLG G VYK + + G I
Sbjct: 22 LQERELVEPLTPSGE--APNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI 79
Query: 433 PVAVRRLGEGGEQR-HREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLA 491
PVA+ L E + ++E + E +A V +P++ +L +L I+ + G L
Sbjct: 80 PVAIMELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLL 138
Query: 492 NALRGRNGQPSTS--LSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQ 549
+ +R + L+W ++ A+G+ YL + R+ VH D+ N+L+
Sbjct: 139 DYVREHKDNIGSQYLLNWCVQI------AKGMNYLED---RRLVHRDLAARNVLVKTPQH 189
Query: 550 PYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKW 609
I+DFGL++L+ + GG + P++ + A E+ + Q
Sbjct: 190 VKITDFGLAKLLGAEEKEYHAEGGKV--------PIK------WMALESILHRIYTHQS- 234
Query: 610 DVYSFGVVLLELLT-GKSP 627
DV+S+GV + EL+T G P
Sbjct: 235 DVWSYGVTVWELMTFGSKP 253
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 61/128 (47%), Gaps = 24/128 (18%)
Query: 519 RGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGA 578
RGL Y+H +H D+KPSN+ ++ D + I DFGL+R + GF+
Sbjct: 136 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR------HTDDEMAGFVA-- 184
Query: 579 LPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIE 638
T YRAPE + Q D++S G ++ ELLTG++ L P T +
Sbjct: 185 -----------TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT--LFPGTDHIDQ 231
Query: 639 VPDLVRWV 646
+ ++R V
Sbjct: 232 LKLILRLV 239
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 122/310 (39%), Gaps = 56/310 (18%)
Query: 415 LGKSGLGIVYKVVLGNGIP------VAVRRLGEGGEQRHRE-FVTEVQAIAKVKHPNIVK 467
LG+ G VYK L P VA++ L + E RE F E A+++HPN+V
Sbjct: 17 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 76
Query: 468 LRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTR-----------LRIAKG 516
L +I + S+G+L L R+ + R + +
Sbjct: 77 LLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQ 136
Query: 517 TARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMG 576
A G+ YL S VH D+ N+L+ + ISD GL R + + +G
Sbjct: 137 IAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREV-----YAADYYKLLG 188
Query: 577 GALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTS 636
+L P++ + APEA + G + D++S+GVVL E+ S L P S
Sbjct: 189 NSL---LPIR------WMAPEAIMYGKFSIDS-DIWSYGVVLWEVF---SYGLQPYCGYS 235
Query: 637 IEVPDLVRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMK 696
+ D+V ++ + P D A V+ L + C P RPR K
Sbjct: 236 NQ--DVVEMIRN--RQVLPCPDDCPAW-------------VYALMIECWNEFPSRRPRFK 278
Query: 697 NVSENLERIG 706
++ L G
Sbjct: 279 DIHSRLRAWG 288
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 103/241 (42%), Gaps = 28/241 (11%)
Query: 389 GEGELVAIDKGFTFELDELLRASAYVLGKSGLGIV---YKVVLGNGIPVAVRRLGEGGEQ 445
GE E+V KG F++ Y+ G+ G+V Y V VA++++ Q
Sbjct: 29 GEVEMV---KGQPFDVGPRYTQLQYI-GEGAYGMVSSAYDHV--RKTRVAIKKISPFEHQ 82
Query: 446 RH-REFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTS 504
+ + + E+Q + + +H N++ +R A + + +I + L S
Sbjct: 83 TYCQRTLREIQILLRFRHENVIGIRDILRASTLEAMRDVYIVQDLMETDLY--KLLKSQQ 140
Query: 505 LSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINIT 564
LS RGL Y+H + +H D+KPSN+L++ I DFGL+R+
Sbjct: 141 LSNDHICYFLYQILRGLKYIHSAN---VLHRDLKPSNLLINTTCDLKICDFGLARI---- 193
Query: 565 GNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTG 624
+ GF+ + T YRAPE + + D++S G +L E+L+
Sbjct: 194 ADPEHDHTGFL---------TEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 244
Query: 625 K 625
+
Sbjct: 245 R 245
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 85/197 (43%), Gaps = 19/197 (9%)
Query: 430 NGIPVAVRRLGEGGEQRH-REFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNG 488
N + VA++++ Q + + + E++ + + +H NI+ + AP + + +I
Sbjct: 51 NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQD 110
Query: 489 NLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDF 548
+ L LS RGL Y+H + +H D+KPSN+LL+
Sbjct: 111 LMETDLY--KLLKCQHLSNDHICYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTC 165
Query: 549 QPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQK 608
I DFGL+R+ + GF+ + T YRAPE + +
Sbjct: 166 DLKICDFGLARV----ADPDHDHTGFL---------TEYVATRWYRAPEIMLNSKGYTKS 212
Query: 609 WDVYSFGVVLLELLTGK 625
D++S G +L E+L+ +
Sbjct: 213 IDIWSVGCILAEMLSNR 229
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 84/190 (44%), Gaps = 32/190 (16%)
Query: 453 EVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLR 512
EV + +++HPN++ L Y + +LI + ++ G L + L + SL+
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE-----SLTEEEATE 118
Query: 513 IAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQP----YISDFGLSRLINITGNNP 568
K G+ YLH + H D+KP NI+L + P I DFGL+ I+ GN
Sbjct: 119 FLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF-GNEF 174
Query: 569 SSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPM-QKWDVYSFGVVLLELLTGKSP 627
+ G T + APE + P+ + D++S GV+ LL+G SP
Sbjct: 175 KNIFG----------------TPEFVAPE--IVNYEPLGLEADMWSIGVITYILLSGASP 216
Query: 628 ELSPTTSTSI 637
L T ++
Sbjct: 217 FLGDTKQETL 226
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 122/310 (39%), Gaps = 56/310 (18%)
Query: 415 LGKSGLGIVYKVVLGNGIP------VAVRRLGEGGEQRHRE-FVTEVQAIAKVKHPNIVK 467
LG+ G VYK L P VA++ L + E RE F E A+++HPN+V
Sbjct: 34 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 93
Query: 468 LRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTR-----------LRIAKG 516
L +I + S+G+L L R+ + R + +
Sbjct: 94 LLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQ 153
Query: 517 TARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMG 576
A G+ YL S VH D+ N+L+ + ISD GL R + + +G
Sbjct: 154 IAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREV-----YAADYYKLLG 205
Query: 577 GALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTS 636
+L P++ + APEA + G + D++S+GVVL E+ S L P S
Sbjct: 206 NSL---LPIR------WMAPEAIMYGKFSIDS-DIWSYGVVLWEVF---SYGLQPYCGYS 252
Query: 637 IEVPDLVRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMK 696
+ D+V ++ + P D A V+ L + C P RPR K
Sbjct: 253 NQ--DVVEMIRN--RQVLPCPDDCPAW-------------VYALMIECWNEFPSRRPRFK 295
Query: 697 NVSENLERIG 706
++ L G
Sbjct: 296 DIHSRLRAWG 305
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 89/201 (44%), Gaps = 27/201 (13%)
Query: 430 NGIPVAVRRLGEGGEQRH-REFVTEVQAIAKVKHPNIVKLRAYYWAPD----EKLLISDF 484
N + VA++++ Q + + + E++ + + +H NI+ + AP + + +
Sbjct: 67 NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYLVTH 126
Query: 485 ISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILL 544
+ +L L+ ++ LS RGL Y+H + +H D+KPSN+LL
Sbjct: 127 LMGADLYKLLKTQH------LSNDHICYFLYQILRGLKYIHSAN---VLHRDLKPSNLLL 177
Query: 545 DNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNR 604
+ I DFGL+R+ + GF+ + T YRAPE +
Sbjct: 178 NTTXDLKICDFGLARV----ADPDHDHTGFL---------TEYVATRWYRAPEIMLNSKG 224
Query: 605 PMQKWDVYSFGVVLLELLTGK 625
+ D++S G +L E+L+ +
Sbjct: 225 YTKSIDIWSVGCILAEMLSNR 245
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 61/128 (47%), Gaps = 24/128 (18%)
Query: 519 RGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGA 578
RGL Y+H +H D+KPSN+ ++ D + I DFGL+R + GF+
Sbjct: 132 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR------HTDDEMAGFVA-- 180
Query: 579 LPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIE 638
T YRAPE + Q D++S G ++ ELLTG++ L P T +
Sbjct: 181 -----------TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT--LFPGTDHIDQ 227
Query: 639 VPDLVRWV 646
+ ++R V
Sbjct: 228 LKLILRLV 235
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 115/288 (39%), Gaps = 50/288 (17%)
Query: 431 GIPVAVRRLG-EGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWAP--DEKLLISDFISN 487
G VAV+ L E G + E++ + + H NIVK + + LI +F+ +
Sbjct: 38 GEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPS 97
Query: 488 GNLANAL-RGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDN 546
G+L L + +N ++ +L+ A +G+ YL R++VH D+ N+L+++
Sbjct: 98 GSLKEYLPKNKN-----KINLKQQLKYAVQICKGMDYL---GSRQYVHRDLAARNVLVES 149
Query: 547 DFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPM 606
+ Q I DFGL++ I + Y APE + +
Sbjct: 150 EHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWY-------------APECLMQSKFYI 196
Query: 607 QKWDVYSFGVVLLELLTGKSPELSPT---------TSTSIEVPDLVRWVKKGFEEENPLS 657
DV+SFGV L ELLT + SP T + V LV +K+G P
Sbjct: 197 AS-DVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGKRLPCP-P 254
Query: 658 DMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERI 705
+ D V+ L C E P R +N+ E E +
Sbjct: 255 NCPD--------------EVYQLMRKCWEFQPSNRTSFQNLIEGFEAL 288
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 114/283 (40%), Gaps = 51/283 (18%)
Query: 434 VAVRRLGEGGEQ-RHREFVTEVQAIAKV-KHPNIVKLRAYYWAPDEKLL-ISDFISNGNL 490
VAV+ L EG HR ++E++ + + H N+V L P L+ I++F GNL
Sbjct: 51 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNL 110
Query: 491 ANALRGRNGQ-----------PSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKP 539
+ LR + + L+ + + A+G+ +L + RK +H D+
Sbjct: 111 STYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAA 167
Query: 540 SNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEAR 599
NILL I DFGL+R I +P Y++ + APE
Sbjct: 168 RNILLSEKNVVKICDFGLARDIY---KDPD-----------YVRKGDARLPLKWMAPETI 213
Query: 600 VPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVRWVKKGFEEENPLSDM 659
+Q DV+SFGV+L E+ + + SP I+ + R +K+G P D
Sbjct: 214 FDRVYTIQS-DVWSFGVLLWEIFSLGA---SPYPGVKID-EEFCRRLKEGTRMRAP--DY 266
Query: 660 VDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENL 702
+ Q + L C +P RP + E+L
Sbjct: 267 TTPEMYQTM-------------LDCWHGEPSQRPTFSELVEHL 296
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 78/190 (41%), Gaps = 37/190 (19%)
Query: 463 PNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLA 522
P IV + + PD+ I D ++ G+L L + + A GL
Sbjct: 252 PFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF-----YAAEIILGLE 306
Query: 523 YLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYM 582
++H R V+ D+KP+NILLD ISD GL+ + + P +S G
Sbjct: 307 HMHN---RFVVYRDLKPANILLDEHGHVRISDLGLA--CDFSKKKPHASVG--------- 352
Query: 583 KPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP----------ELSPT 632
T+ Y APE G D +S G +L +LL G SP E+
Sbjct: 353 -------THGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRM 405
Query: 633 TST-SIEVPD 641
T T ++E+PD
Sbjct: 406 TLTMAVELPD 415
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 78/190 (41%), Gaps = 37/190 (19%)
Query: 463 PNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLA 522
P IV + + PD+ I D ++ G+L L + + A GL
Sbjct: 252 PFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF-----YAAEIILGLE 306
Query: 523 YLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYM 582
++H R V+ D+KP+NILLD ISD GL+ + + P +S G
Sbjct: 307 HMHN---RFVVYRDLKPANILLDEHGHVRISDLGLA--CDFSKKKPHASVG--------- 352
Query: 583 KPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP----------ELSPT 632
T+ Y APE G D +S G +L +LL G SP E+
Sbjct: 353 -------THGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRM 405
Query: 633 TST-SIEVPD 641
T T ++E+PD
Sbjct: 406 TLTMAVELPD 415
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 98/219 (44%), Gaps = 37/219 (16%)
Query: 415 LGKSGLGIV-YKVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYW 473
+G+ GIV V +G VAV+++ +QR EV + +H N+V++ Y
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 96
Query: 474 APDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECS---PR 530
DE ++ +F+ G L T + TR+ + A LA L S +
Sbjct: 97 VGDELWVVMEFLEGGAL------------TDIVTHTRMNEEQIAAVCLAVLQALSVLHAQ 144
Query: 531 KFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKT 590
+H DIK +ILL +D + +SDFG ++ P +G PY
Sbjct: 145 GVIHRDIKSDSILLTHDGRVKLSDFGFC--AQVSKEVPRRK-XLVGT--PY--------- 190
Query: 591 NNYRAPE--ARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
+ APE +R+P + D++S G++++E++ G+ P
Sbjct: 191 --WMAPELISRLPYG---PEVDIWSLGIMVIEMVDGEPP 224
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 98/219 (44%), Gaps = 37/219 (16%)
Query: 415 LGKSGLGIV-YKVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYW 473
+G+ GIV V +G VAV+++ +QR EV + +H N+V++ Y
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 98
Query: 474 APDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECS---PR 530
DE ++ +F+ G L T + TR+ + A LA L S +
Sbjct: 99 VGDELWVVMEFLEGGAL------------TDIVTHTRMNEEQIAAVCLAVLQALSVLHAQ 146
Query: 531 KFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKT 590
+H DIK +ILL +D + +SDFG ++ P +G PY
Sbjct: 147 GVIHRDIKSDSILLTHDGRVKLSDFGFC--AQVSKEVPRRK-XLVGT--PY--------- 192
Query: 591 NNYRAPE--ARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
+ APE +R+P + D++S G++++E++ G+ P
Sbjct: 193 --WMAPELISRLPYG---PEVDIWSLGIMVIEMVDGEPP 226
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 105/221 (47%), Gaps = 33/221 (14%)
Query: 415 LGKSGLGIVYKVV-LGNGIPVAVRRLG--EGGEQRHR-EFVTEVQAIAKVKHPNIVKLRA 470
+G+ VY+ L +G+PVA++++ + + + R + + E+ + ++ HPN++K A
Sbjct: 40 IGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYA 99
Query: 471 YYWAPDEKLLISDFISNGNLANALRGRNGQ----PSTSLSWSTRLRIAKGTARGLAYLHE 526
+ +E ++ + G+L+ ++ Q P ++ W +++ L ++H
Sbjct: 100 SFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTV-WKYFVQLCS----ALEHMHS 154
Query: 527 CSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQ 586
R+ +H DIKP+N+ + + D GL R + + +++ +G PY
Sbjct: 155 ---RRVMHRDIKPANVFITATGVVKLGDLGLGRFFS---SKTTAAHSLVGT--PY----- 201
Query: 587 TEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
Y +PE R+ N K D++S G +L E+ +SP
Sbjct: 202 ------YMSPE-RIHENGYNFKSDIWSLGCLLYEMAALQSP 235
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 83/195 (42%), Gaps = 34/195 (17%)
Query: 449 EFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWS 508
E EV + +V HPNI+ L Y + +LI + +S G L + L + SLS
Sbjct: 61 EIEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKE-----SLSEE 115
Query: 509 TRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNI-LLDNDF-QPYIS--DFGLSRLIN-- 562
K G+ YLH +K H D+KP NI LLD + P+I DFGL+ I
Sbjct: 116 EATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG 172
Query: 563 ITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELL 622
+ N + F+ + +P+ E D++S GV+ LL
Sbjct: 173 VEFKNIFGTPEFVAPEIVNYEPLGLEA--------------------DMWSIGVITYILL 212
Query: 623 TGKSPELSPTTSTSI 637
+G SP L T ++
Sbjct: 213 SGASPFLGDTKQETL 227
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 116/264 (43%), Gaps = 34/264 (12%)
Query: 397 DKGFTFELDELLRASAYVLGKSGLGIVYKVVL---GNGIPVAVRRLGEGGEQRH-REFVT 452
DK + D LL A LG G V + V I VA++ L +G E+ E +
Sbjct: 327 DKKLFLKRDNLLIADI-ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMR 385
Query: 453 EVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLR 512
E Q + ++ +P IV+L A + +L+ + G L L G+ + + S
Sbjct: 386 EAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGPLHKFLVGKREE----IPVSNVAE 440
Query: 513 IAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSG 572
+ + G+ YL E + FVH ++ N+LL N ISDFGLS+ + G + S
Sbjct: 441 LLHQVSMGMKYLEE---KNFVHRNLAARNVLLVNRHYAKISDFGLSKAL---GADDSYYT 494
Query: 573 GFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSP 631
G P + APE + + + DV+S+GV + E L+ G+ P
Sbjct: 495 ARSAGKWPL----------KWYAPEC-INFRKFSSRSDVWSYGVTMWEALSYGQKP---- 539
Query: 632 TTSTSIEVPDLVRWVKKGFEEENP 655
++ P+++ ++++G E P
Sbjct: 540 --YKKMKGPEVMAFIEQGKRMECP 561
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 98/219 (44%), Gaps = 37/219 (16%)
Query: 415 LGKSGLGIV-YKVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYW 473
+G+ GIV V +G VAV+++ +QR EV + +H N+V++ Y
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 87
Query: 474 APDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECS---PR 530
DE ++ +F+ G L T + TR+ + A LA L S +
Sbjct: 88 VGDELWVVMEFLEGGAL------------TDIVTHTRMNEEQIAAVCLAVLQALSVLHAQ 135
Query: 531 KFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKT 590
+H DIK +ILL +D + +SDFG ++ P +G PY
Sbjct: 136 GVIHRDIKSDSILLTHDGRVKLSDFGFC--AQVSKEVPRRK-XLVGT--PY--------- 181
Query: 591 NNYRAPE--ARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
+ APE +R+P + D++S G++++E++ G+ P
Sbjct: 182 --WMAPELISRLPYG---PEVDIWSLGIMVIEMVDGEPP 215
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 98/219 (44%), Gaps = 37/219 (16%)
Query: 415 LGKSGLGIV-YKVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYW 473
+G+ GIV V +G VAV+++ +QR EV + +H N+V++ Y
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 91
Query: 474 APDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECS---PR 530
DE ++ +F+ G L T + TR+ + A LA L S +
Sbjct: 92 VGDELWVVMEFLEGGAL------------TDIVTHTRMNEEQIAAVCLAVLQALSVLHAQ 139
Query: 531 KFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKT 590
+H DIK +ILL +D + +SDFG ++ P +G PY
Sbjct: 140 GVIHRDIKSDSILLTHDGRVKLSDFGFC--AQVSKEVPRRK-XLVGT--PY--------- 185
Query: 591 NNYRAPE--ARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
+ APE +R+P + D++S G++++E++ G+ P
Sbjct: 186 --WMAPELISRLPYG---PEVDIWSLGIMVIEMVDGEPP 219
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 92/210 (43%), Gaps = 33/210 (15%)
Query: 434 VAVRRLGEGGEQRHREFVT-EVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLAN 492
+ RRL RE + EV + +++HPNI+ L + + +LI + +S G L +
Sbjct: 38 IKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFD 97
Query: 493 ALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQP-- 550
L + SL+ + K G+ YLH ++ H D+KP NI+L + P
Sbjct: 98 FLAEKE-----SLTEDEATQFLKQILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNP 149
Query: 551 --YISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPM-Q 607
+ DFG++ I GN + G T + APE + P+
Sbjct: 150 RIKLIDFGIAHKIE-AGNEFKNIFG----------------TPEFVAPE--IVNYEPLGL 190
Query: 608 KWDVYSFGVVLLELLTGKSPELSPTTSTSI 637
+ D++S GV+ LL+G SP L T ++
Sbjct: 191 EADMWSIGVITYILLSGASPFLGETKQETL 220
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 108/237 (45%), Gaps = 45/237 (18%)
Query: 403 ELDELLRASAYVLGKSGLGIVYKV--VLG--NGIPVAVRRLGEGGEQRHREFVTEVQA-- 456
E ELLR VLGK G G V++V V G G A++ L + R+ + +A
Sbjct: 17 ECFELLR----VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAER 72
Query: 457 --IAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNG--QPSTSLSWSTRLR 512
+ +VKHP IV L + + LI +++S G L L R G T+ + +
Sbjct: 73 NILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLE-REGIFMEDTACFYLAEIS 131
Query: 513 IAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSG 572
+A L +LH+ + ++ D+KP NI+L++ ++DFGL + + ++ + +
Sbjct: 132 MA------LGHLHQ---KGIIYRDLKPENIMLNHQGHVKLTDFGLCKE---SIHDGTVTH 179
Query: 573 GFMGGALPYMKPVQTEKTNNYRAPE--ARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
F G T Y APE R NR + W S G ++ ++LTG P
Sbjct: 180 TFCG-------------TIEYMAPEILMRSGHNRAVDWW---SLGALMYDMLTGAPP 220
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 86/194 (44%), Gaps = 32/194 (16%)
Query: 449 EFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWS 508
E EV + +++HPNI+ L + + +LI + +S G L + L + SL+
Sbjct: 75 EIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKE-----SLTED 129
Query: 509 TRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQP----YISDFGLSRLINIT 564
+ K G+ YLH ++ H D+KP NI+L + P + DFG++ I
Sbjct: 130 EATQFLKQILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIE-A 185
Query: 565 GNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPM-QKWDVYSFGVVLLELLT 623
GN + G T + APE + P+ + D++S GV+ LL+
Sbjct: 186 GNEFKNIFG----------------TPEFVAPE--IVNYEPLGLEADMWSIGVITYILLS 227
Query: 624 GKSPELSPTTSTSI 637
G SP L T ++
Sbjct: 228 GASPFLGETKQETL 241
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 124/308 (40%), Gaps = 56/308 (18%)
Query: 415 LGKSGLG-IVYKVVLGNG-----IPVAVRRLGEGGEQRHRE-FVTEVQAIAKV-KHPNIV 466
LG G +V G G + VAV+ L +E ++E++ ++ + +H NIV
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 467 KLRAYYWAPDEKLLISDFISNGNLANALRGR-----------NGQPSTSLSWSTRLRIAK 515
L L+I+++ G+L N LR + + P LS L +
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSS 173
Query: 516 GTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFM 575
A+G+A+L + + +H D+ N+LL N I DFGL+R I N +
Sbjct: 174 QVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL 230
Query: 576 GGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTST 635
PV+ + APE+ +Q DV+S+G++L E+ S L+P
Sbjct: 231 --------PVK------WMAPESIFDCVYTVQS-DVWSYGILLWEIF---SLGLNPYPGI 272
Query: 636 SIEVPDLVRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRM 695
+ + VK G++ P A K + ++ AC +P RP
Sbjct: 273 LVN-SKFYKLVKDGYQMAQP------------AFAPKNIYSIMQ---ACWALEPTHRPTF 316
Query: 696 KNVSENLE 703
+ + L+
Sbjct: 317 QQICSFLQ 324
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 89/192 (46%), Gaps = 34/192 (17%)
Query: 440 GEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEK-----LLISDFISNGNLANAL 494
G E + V+EV + ++KHPNIV+ YY ++ ++ ++ G+LA+ +
Sbjct: 42 GSMTEAEKQMLVSEVNLLRELKHPNIVR---YYDRIIDRTNTTLYIVMEYCEGGDLASVI 98
Query: 495 RGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRK-----FVHGDIKPSNILLDNDFQ 549
+ + L LR+ T LA L EC R +H D+KP+N+ LD
Sbjct: 99 -TKGTKERQYLDEEFVLRVM--TQLTLA-LKECHRRSDGGHTVLHRDLKPANVFLDGKQN 154
Query: 550 PYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKW 609
+ DFGL+R++N ++ + F+G YM P Q R+ N +K
Sbjct: 155 VKLGDFGLARILN---HDEDFAKEFVGTPY-YMSPEQMN----------RMSYN---EKS 197
Query: 610 DVYSFGVVLLEL 621
D++S G +L EL
Sbjct: 198 DIWSLGCLLYEL 209
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 115/289 (39%), Gaps = 50/289 (17%)
Query: 430 NGIPVAVRRLG-EGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWAP--DEKLLISDFIS 486
G VAV+ L E G + E++ + + H NIVK + + LI +F+
Sbjct: 49 TGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLP 108
Query: 487 NGNLANAL-RGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLD 545
+G+L L + +N ++ +L+ A +G+ YL R++VH D+ N+L++
Sbjct: 109 SGSLKEYLPKNKN-----KINLKQQLKYAVQICKGMDYL---GSRQYVHRDLAARNVLVE 160
Query: 546 NDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRP 605
++ Q I DFGL++ I + Y APE +
Sbjct: 161 SEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWY-------------APECLMQSKFY 207
Query: 606 MQKWDVYSFGVVLLELLTGKSPELSPT---------TSTSIEVPDLVRWVKKGFEEENPL 656
+ DV+SFGV L ELLT + SP T + V LV +K+G P
Sbjct: 208 IAS-DVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGKRLPCP- 265
Query: 657 SDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERI 705
+ D V+ L C E P R +N+ E E +
Sbjct: 266 PNCPD--------------EVYQLMRKCWEFQPSNRTSFQNLIEGFEAL 300
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 78/190 (41%), Gaps = 37/190 (19%)
Query: 463 PNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLA 522
P IV + + PD+ I D ++ G+L L + + A GL
Sbjct: 251 PFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF-----YAAEIILGLE 305
Query: 523 YLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYM 582
++H R V+ D+KP+NILLD ISD GL+ + + P +S G
Sbjct: 306 HMHN---RFVVYRDLKPANILLDEHGHVRISDLGLA--CDFSKKKPHASVG--------- 351
Query: 583 KPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP----------ELSPT 632
T+ Y APE G D +S G +L +LL G SP E+
Sbjct: 352 -------THGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRM 404
Query: 633 TST-SIEVPD 641
T T ++E+PD
Sbjct: 405 TLTMAVELPD 414
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 125/305 (40%), Gaps = 56/305 (18%)
Query: 415 LGKSGLG-IVYKVVLGNG-----IPVAVRRLGEGGEQRHRE-FVTEVQAIAKV-KHPNIV 466
LG G +V G G + VAV+ L +E ++E++ ++ + +H NIV
Sbjct: 46 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 105
Query: 467 KLRAYYWAPDEKLLISDFISNGNLANALRGR--------NGQPSTSLSWSTRLRIAKGTA 518
L L+I+++ G+L N LR + +G+P L L + A
Sbjct: 106 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRP---LELRDLLHFSSQVA 162
Query: 519 RGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGA 578
+G+A+L + + +H D+ N+LL N I DFGL+R I N +
Sbjct: 163 QGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL--- 216
Query: 579 LPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIE 638
PV+ + APE+ +Q DV+S+G++L E+ S L+P +
Sbjct: 217 -----PVK------WMAPESIFDCVYTVQS-DVWSYGILLWEIF---SLGLNPYPGILVN 261
Query: 639 VPDLVRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNV 698
+ VK G++ P A K + ++ AC +P RP + +
Sbjct: 262 -SKFYKLVKDGYQMAQP------------AFAPKNIYSIMQ---ACWALEPTHRPTFQQI 305
Query: 699 SENLE 703
L+
Sbjct: 306 CSFLQ 310
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 126/306 (41%), Gaps = 54/306 (17%)
Query: 415 LGKSGLG-IVYKVVLGNG-----IPVAVRRLGEGGEQRHRE-FVTEVQAIAKV-KHPNIV 466
LG G +V G G + VAV+ L +E ++E++ ++ + +H NIV
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 467 KLRAYYWAPDEKLLISDFISNGNLANALRGRN---------GQPSTSLSWSTRLRIAKGT 517
L L+I+++ G+L N LR ++ +++LS L +
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQV 173
Query: 518 ARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGG 577
A+G+A+L + + +H D+ N+LL N I DFGL+R I N +
Sbjct: 174 AQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL-- 228
Query: 578 ALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSI 637
PV+ + APE+ +Q DV+S+G++L E+ S L+P +
Sbjct: 229 ------PVK------WMAPESIFDCVYTVQS-DVWSYGILLWEIF---SLGLNPYPGILV 272
Query: 638 EVPDLVRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKN 697
+ VK G++ P A K + ++ AC +P RP +
Sbjct: 273 N-SKFYKLVKDGYQMAQP------------AFAPKNIYSIMQ---ACWALEPTHRPTFQQ 316
Query: 698 VSENLE 703
+ L+
Sbjct: 317 ICSFLQ 322
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 84/198 (42%), Gaps = 31/198 (15%)
Query: 434 VAVRRLGEGGEQ--RHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLA 491
VAV++L + R E++ + +KH N++ L + I DF S L
Sbjct: 56 VAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDVFTPATS---IEDF-SEVYLV 111
Query: 492 NALRG---RNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDF 548
L G N S +LS + RGL Y+H +H D+KPSN+ ++ D
Sbjct: 112 TTLMGADLNNIVKSQALSDEHVQFLVYQLLRGLKYIHSAG---IIHRDLKPSNVAVNEDS 168
Query: 549 QPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQK 608
+ I DFGL+R + G++ T YRAPE + Q
Sbjct: 169 ELRILDFGLARQAD------EEMTGYVA-------------TRWYRAPEIMLNWMHYNQT 209
Query: 609 WDVYSFGVVLLELLTGKS 626
D++S G ++ ELL GK+
Sbjct: 210 VDIWSVGCIMAELLQGKA 227
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 75/182 (41%), Gaps = 29/182 (15%)
Query: 448 REFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANAL--RGRNGQPSTSL 505
++ EV+ + + HPNIVKL L+ ++ S G + + L GR +
Sbjct: 58 QKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARA 117
Query: 506 SWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITG 565
+ + + Y C + VH D+K N+LLD D I+DFG S G
Sbjct: 118 KF-------RQIVSAVQY---CHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTF-G 166
Query: 566 NNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGK 625
N + G+ PY P + + Y PE DV+S GV+L L++G
Sbjct: 167 NKLDT----FCGSPPYAAP-ELFQGKKYDGPEV-----------DVWSLGVILYTLVSGS 210
Query: 626 SP 627
P
Sbjct: 211 LP 212
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 128/306 (41%), Gaps = 54/306 (17%)
Query: 415 LGKSGLG-IVYKVVLGNG-----IPVAVRRLGEGGEQRHRE-FVTEVQAIAKV-KHPNIV 466
LG G +V G G + VAV+ L +E ++E++ ++ + +H NIV
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 467 KLRAYYWAPDEKLLISDFISNGNLANALRGRN----GQPSTSLSWSTR-----LRIAKGT 517
L L+I+++ G+L N LR ++ P+ +++ ST L +
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQV 173
Query: 518 ARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGG 577
A+G+A+L + + +H D+ N+LL N I DFGL+R I N +
Sbjct: 174 AQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL-- 228
Query: 578 ALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSI 637
PV+ + APE+ +Q DV+S+G++L E+ S L+P +
Sbjct: 229 ------PVK------WMAPESIFDCVYTVQS-DVWSYGILLWEIF---SLGLNPYPGILV 272
Query: 638 EVPDLVRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKN 697
+ VK G++ P A K + ++ AC +P RP +
Sbjct: 273 N-SKFYKLVKDGYQMAQP------------AFAPKNIYSIMQ---ACWALEPTHRPTFQQ 316
Query: 698 VSENLE 703
+ L+
Sbjct: 317 ICSFLQ 322
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 75/182 (41%), Gaps = 29/182 (15%)
Query: 448 REFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANAL--RGRNGQPSTSL 505
++ EV+ + + HPNIVKL L+ ++ S G + + L GR +
Sbjct: 58 QKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARA 117
Query: 506 SWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITG 565
+ + + Y C + VH D+K N+LLD D I+DFG S G
Sbjct: 118 KF-------RQIVSAVQY---CHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTF-G 166
Query: 566 NNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGK 625
N + G+ PY P + + Y PE DV+S GV+L L++G
Sbjct: 167 NKLDT----FCGSPPYAAP-ELFQGKKYDGPEV-----------DVWSLGVILYTLVSGS 210
Query: 626 SP 627
P
Sbjct: 211 LP 212
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 78/190 (41%), Gaps = 37/190 (19%)
Query: 463 PNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLA 522
P IV + + PD+ I D ++ G+L L + + A GL
Sbjct: 252 PFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF-----YAAEIILGLE 306
Query: 523 YLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYM 582
++H R V+ D+KP+NILLD ISD GL+ + + P +S G
Sbjct: 307 HMHN---RFVVYRDLKPANILLDEHGHVRISDLGLA--CDFSKKKPHASVG--------- 352
Query: 583 KPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP----------ELSPT 632
T+ Y APE G D +S G +L +LL G SP E+
Sbjct: 353 -------THGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRM 405
Query: 633 TST-SIEVPD 641
T T ++E+PD
Sbjct: 406 TLTMAVELPD 415
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 85/197 (43%), Gaps = 19/197 (9%)
Query: 430 NGIPVAVRRLGEGGEQRH-REFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNG 488
N + VA++++ Q + + + E++ + +H NI+ + AP + + +I
Sbjct: 49 NKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDIIRAPTIEQMKDVYIVQD 108
Query: 489 NLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDF 548
+ L + LS RGL Y+H + +H D+KPSN+LL+
Sbjct: 109 LMETDLYKL--LKTQHLSNDHICYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTC 163
Query: 549 QPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQK 608
I DFGL+R+ + GF+ + T YRAPE + +
Sbjct: 164 DLKICDFGLARV----ADPDHDHTGFL---------TEYVATRWYRAPEIMLNSKGYTKS 210
Query: 609 WDVYSFGVVLLELLTGK 625
D++S G +L E+L+ +
Sbjct: 211 IDIWSVGCILAEMLSNR 227
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 108/237 (45%), Gaps = 45/237 (18%)
Query: 403 ELDELLRASAYVLGKSGLGIVYKV--VLG--NGIPVAVRRLGEGGEQRHREFVTEVQA-- 456
E ELLR VLGK G G V++V V G G A++ L + R+ + +A
Sbjct: 17 ECFELLR----VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAER 72
Query: 457 --IAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNG--QPSTSLSWSTRLR 512
+ +VKHP IV L + + LI +++S G L L R G T+ + +
Sbjct: 73 NILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLE-REGIFMEDTACFYLAEIS 131
Query: 513 IAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSG 572
+A L +LH+ + ++ D+KP NI+L++ ++DFGL + + ++ + +
Sbjct: 132 MA------LGHLHQ---KGIIYRDLKPENIMLNHQGHVKLTDFGLCKE---SIHDGTVTH 179
Query: 573 GFMGGALPYMKPVQTEKTNNYRAPE--ARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
F G T Y APE R NR + W S G ++ ++LTG P
Sbjct: 180 XFCG-------------TIEYMAPEILMRSGHNRAVDWW---SLGALMYDMLTGAPP 220
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 75/182 (41%), Gaps = 29/182 (15%)
Query: 448 REFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANAL--RGRNGQPSTSL 505
++ EV+ + + HPNIVKL L+ ++ S G + + L GR +
Sbjct: 58 QKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARA 117
Query: 506 SWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITG 565
+ + + Y C + VH D+K N+LLD D I+DFG S G
Sbjct: 118 KF-------RQIVSAVQY---CHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTF-G 166
Query: 566 NNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGK 625
N + G+ PY P + + Y PE DV+S GV+L L++G
Sbjct: 167 NKLDT----FCGSPPYAAP-ELFQGKKYDGPEV-----------DVWSLGVILYTLVSGS 210
Query: 626 SP 627
P
Sbjct: 211 LP 212
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 113/283 (39%), Gaps = 51/283 (18%)
Query: 434 VAVRRLGEGGEQ-RHREFVTEVQAIAKV-KHPNIVKLRAYYWAPDEKLL-ISDFISNGNL 490
VAV+ L EG HR ++E++ + + H N+V L P L+ I +F GNL
Sbjct: 62 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 121
Query: 491 ANALRGRNGQ-----------PSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKP 539
+ LR + + L+ + + A+G+ +L + RK +H D+
Sbjct: 122 STYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAA 178
Query: 540 SNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEAR 599
NILL I DFGL+R I +P Y++ + APE
Sbjct: 179 RNILLSEKNVVKICDFGLARDIY---KDPD-----------YVRKGDARLPLKWMAPETI 224
Query: 600 VPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVRWVKKGFEEENPLSDM 659
+Q DV+SFGV+L E+ + + SP I+ + R +K+G P D
Sbjct: 225 FDRVYTIQS-DVWSFGVLLWEIFSLGA---SPYPGVKID-EEFCRRLKEGTRMRAP--DY 277
Query: 660 VDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENL 702
+ Q + L C +P RP + E+L
Sbjct: 278 TTPEMYQTM-------------LDCWHGEPSQRPTFSELVEHL 307
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 84/190 (44%), Gaps = 32/190 (16%)
Query: 453 EVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLR 512
EV + +++HPN++ L Y + +LI + ++ G L + L + SL+
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE-----SLTEEEATE 118
Query: 513 IAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQP----YISDFGLSRLINITGNNP 568
K G+ YLH + H D+KP NI+L + P I DFGL+ I+ GN
Sbjct: 119 FLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF-GNEF 174
Query: 569 SSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPM-QKWDVYSFGVVLLELLTGKSP 627
+ G T + APE + P+ + D++S GV+ LL+G SP
Sbjct: 175 KNIFG----------------TPAFVAPE--IVNYEPLGLEADMWSIGVITYILLSGASP 216
Query: 628 ELSPTTSTSI 637
L T ++
Sbjct: 217 FLGDTKQETL 226
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 113/283 (39%), Gaps = 51/283 (18%)
Query: 434 VAVRRLGEGGEQ-RHREFVTEVQAIAKV-KHPNIVKLRAYYWAPDEKLL-ISDFISNGNL 490
VAV+ L EG HR ++E++ + + H N+V L P L+ I +F GNL
Sbjct: 60 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 119
Query: 491 ANALRGRNGQ-----------PSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKP 539
+ LR + + L+ + + A+G+ +L + RK +H D+
Sbjct: 120 STYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAA 176
Query: 540 SNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEAR 599
NILL I DFGL+R I +P Y++ + APE
Sbjct: 177 RNILLSEKNVVKICDFGLARDIY---KDPD-----------YVRKGDARLPLKWMAPETI 222
Query: 600 VPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVRWVKKGFEEENPLSDM 659
+Q DV+SFGV+L E+ + + SP I+ + R +K+G P D
Sbjct: 223 FDRVYTIQS-DVWSFGVLLWEIFSLGA---SPYPGVKID-EEFCRRLKEGTRMRAP--DY 275
Query: 660 VDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENL 702
+ Q + L C +P RP + E+L
Sbjct: 276 TTPEMYQTM-------------LDCWHGEPSQRPTFSELVEHL 305
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 61/128 (47%), Gaps = 24/128 (18%)
Query: 519 RGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGA 578
RGL Y+H +H D+KPSN+ ++ D + I DFGL+R + G++
Sbjct: 136 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR------HTDDEMTGYVA-- 184
Query: 579 LPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIE 638
T YRAPE + Q D++S G ++ ELLTG++ L P T +
Sbjct: 185 -----------TRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRT--LFPGTDHIDQ 231
Query: 639 VPDLVRWV 646
+ ++R V
Sbjct: 232 LKLILRLV 239
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 100/218 (45%), Gaps = 33/218 (15%)
Query: 414 VLGKSGLGIVYK-VVLGNG----IPVAVRRLGEGGEQR-HREFVTEVQAIAKVKHPNIVK 467
VL G VYK + + G IPVA++ L E + ++E + E +A V +P++ +
Sbjct: 22 VLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 81
Query: 468 LRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTS--LSWSTRLRIAKGTARGLAYLH 525
L +L I+ + G L + +R + L+W ++ A+G+ YL
Sbjct: 82 LLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYLE 134
Query: 526 ECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPV 585
+ R+ VH D+ N+L+ I+DFGL++L+ + GG + P+
Sbjct: 135 D---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--------PI 183
Query: 586 QTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT 623
+ + A E+ + Q DV+S+GV + EL+T
Sbjct: 184 K------WMALESILHRIYTHQS-DVWSYGVTVWELMT 214
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 113/283 (39%), Gaps = 51/283 (18%)
Query: 434 VAVRRLGEGGEQ-RHREFVTEVQAIAKV-KHPNIVKLRAYYWAPDEKLL-ISDFISNGNL 490
VAV+ L EG HR ++E++ + + H N+V L P L+ I +F GNL
Sbjct: 97 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 156
Query: 491 ANALRGRNGQ-----------PSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKP 539
+ LR + + L+ + + A+G+ +L + RK +H D+
Sbjct: 157 STYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAA 213
Query: 540 SNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEAR 599
NILL I DFGL+R I +P Y++ + APE
Sbjct: 214 RNILLSEKNVVKICDFGLARDIY---KDPD-----------YVRKGDARLPLKWMAPETI 259
Query: 600 VPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVRWVKKGFEEENPLSDM 659
+Q DV+SFGV+L E+ + + SP I+ + R +K+G P D
Sbjct: 260 FDRVYTIQS-DVWSFGVLLWEIFSLGA---SPYPGVKID-EEFCRRLKEGTRMRAP--DY 312
Query: 660 VDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENL 702
+ Q + L C +P RP + E+L
Sbjct: 313 TTPEMYQTM-------------LDCWHGEPSQRPTFSELVEHL 342
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 98/219 (44%), Gaps = 37/219 (16%)
Query: 415 LGKSGLGIV-YKVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYW 473
+G+ GIV V +G VAV+++ +QR EV + +H N+V++ Y
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 218
Query: 474 APDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECS---PR 530
DE ++ +F+ G L T + TR+ + A LA L S +
Sbjct: 219 VGDELWVVMEFLEGGAL------------TDIVTHTRMNEEQIAAVCLAVLQALSVLHAQ 266
Query: 531 KFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKT 590
+H DIK +ILL +D + +SDFG ++ P +G PY
Sbjct: 267 GVIHRDIKSDSILLTHDGRVKLSDFGFC--AQVSKEVPRRK-XLVGT--PY--------- 312
Query: 591 NNYRAPE--ARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
+ APE +R+P + D++S G++++E++ G+ P
Sbjct: 313 --WMAPELISRLPYG---PEVDIWSLGIMVIEMVDGEPP 346
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 100/218 (45%), Gaps = 33/218 (15%)
Query: 414 VLGKSGLGIVYK-VVLGNG----IPVAVRRLGEGGEQR-HREFVTEVQAIAKVKHPNIVK 467
VL G VYK + + G IPVA++ L E + ++E + E +A V +P++ +
Sbjct: 29 VLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 88
Query: 468 LRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTS--LSWSTRLRIAKGTARGLAYLH 525
L +L I+ + G L + +R + L+W ++ A+G+ YL
Sbjct: 89 LLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYLE 141
Query: 526 ECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPV 585
+ R+ VH D+ N+L+ I+DFGL++L+ + GG + P+
Sbjct: 142 D---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--------PI 190
Query: 586 QTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT 623
+ + A E+ + Q DV+S+GV + EL+T
Sbjct: 191 K------WMALESILHRIYTHQS-DVWSYGVTVWELMT 221
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 95/224 (42%), Gaps = 30/224 (13%)
Query: 414 VLGKSGLGIVYKVV-LGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVK---------HP 463
V+G+ +V + V G AV+ + E+ E + EV+ + + HP
Sbjct: 101 VIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHP 160
Query: 464 NIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAY 523
+I+ L Y + L+ D + G L + L + +LS I + +++
Sbjct: 161 HIITLIDSYESSSFMFLVFDLMRKGELFDYLTEK-----VALSEKETRSIMRSLLEAVSF 215
Query: 524 LHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMK 583
LH VH D+KP NILLD++ Q +SDFG S + G G G P +
Sbjct: 216 LH---ANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLE-PGEKLRELCGTPGYLAPEIL 271
Query: 584 PVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
++T+ PG ++ D+++ GV+L LL G P
Sbjct: 272 KCSMDETH---------PGY--GKEVDLWACGVILFTLLAGSPP 304
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 115/282 (40%), Gaps = 50/282 (17%)
Query: 434 VAVRRLGEGGEQ-RHREFVTEVQAIAKV-KHPNIVKLRAYYWAPDEKLL-ISDFISNGNL 490
VAV+ L EG HR ++E++ + + H N+V L P L+ I +F GNL
Sbjct: 61 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 120
Query: 491 ANALRGRNGQ--PSTS--------LSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPS 540
+ LR + + P + L+ + + A+G+ +L + RK +H D+
Sbjct: 121 STYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAAR 177
Query: 541 NILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARV 600
NILL I DFGL+R +I + G L +M APE
Sbjct: 178 NILLSEKNVVKICDFGLAR--DIXKDPDXVRKGDARLPLKWM------------APETIF 223
Query: 601 PGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVRWVKKGFEEENPLSDMV 660
+Q DV+SFGV+L E+ + + SP I+ + R +K+G P D
Sbjct: 224 DRVYTIQS-DVWSFGVLLWEIFSLGA---SPYPGVKID-EEFCRRLKEGTRMRAP--DYT 276
Query: 661 DAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENL 702
+ Q + L C +P RP + E+L
Sbjct: 277 TPEMYQTM-------------LDCWHGEPSQRPTFSELVEHL 305
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 98/219 (44%), Gaps = 37/219 (16%)
Query: 415 LGKSGLGIV-YKVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYW 473
+G+ GIV V +G VAV+++ +QR EV + +H N+V++ Y
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 141
Query: 474 APDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECS---PR 530
DE ++ +F+ G L T + TR+ + A LA L S +
Sbjct: 142 VGDELWVVMEFLEGGAL------------TDIVTHTRMNEEQIAAVCLAVLQALSVLHAQ 189
Query: 531 KFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKT 590
+H DIK +ILL +D + +SDFG ++ P +G PY
Sbjct: 190 GVIHRDIKSDSILLTHDGRVKLSDFGFC--AQVSKEVPRRK-XLVGT--PY--------- 235
Query: 591 NNYRAPE--ARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
+ APE +R+P + D++S G++++E++ G+ P
Sbjct: 236 --WMAPELISRLPYG---PEVDIWSLGIMVIEMVDGEPP 269
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 74/182 (40%), Gaps = 29/182 (15%)
Query: 448 REFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANAL--RGRNGQPSTSL 505
++ EV+ + HPNIVKL L+ ++ S G + + L GR +
Sbjct: 58 QKLFREVRIXKVLNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARA 117
Query: 506 SWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITG 565
+ + + Y C + VH D+K N+LLD D I+DFG S G
Sbjct: 118 KF-------RQIVSAVQY---CHQKFIVHRDLKAENLLLDADXNIKIADFGFSNEFTF-G 166
Query: 566 NNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGK 625
N + GA PY P + + Y PE DV+S GV+L L++G
Sbjct: 167 NKLDA----FCGAPPYAAP-ELFQGKKYDGPEV-----------DVWSLGVILYTLVSGS 210
Query: 626 SP 627
P
Sbjct: 211 LP 212
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 119/288 (41%), Gaps = 52/288 (18%)
Query: 429 GNGIPVAVR--RLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEK-----LLI 481
G + VAV+ +L ++ EF++E + HPN+++L + ++I
Sbjct: 60 GTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVI 119
Query: 482 SDFISNGNLANAL---RGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIK 538
F+ G+L L R G L T L+ A G+ YL S R F+H D+
Sbjct: 120 LPFMKYGDLHTYLLYSRLETGPKHIPLQ--TLLKFMVDIALGMEYL---SNRNFLHRDLA 174
Query: 539 PSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEA 598
N +L +D ++DFGLS+ I S + G + M PV+ + A E+
Sbjct: 175 ARNCMLRDDMTVCVADFGLSKKI-------YSGDYYRQGRIAKM-PVK------WIAIES 220
Query: 599 RVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTSIEVPDLVRWVKKGFEEENPLS 657
+ K DV++FGV + E+ T G +P ++ ++ ++ G + P
Sbjct: 221 -LADRVYTSKSDVWAFGVTMWEIATRGMTP------YPGVQNHEMYDYLLHGHRLKQP-E 272
Query: 658 DMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERI 705
D +D + + + +C DP RP + LE++
Sbjct: 273 DCLDEL--------------YEIMYSCWRTDPLDRPTFSVLRLQLEKL 306
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 113/281 (40%), Gaps = 49/281 (17%)
Query: 434 VAVRRLGEGGEQ-RHREFVTEVQAIAKV-KHPNIVKLRAYYWAPDEKLL-ISDFISNGNL 490
VAV+ L EG HR ++E++ + + H N+V L P L+ I +F GNL
Sbjct: 62 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 121
Query: 491 ANALRGRNGQ---------PSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSN 541
+ LR + + L+ + + A+G+ +L + RK +H D+ N
Sbjct: 122 STYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQVAKGMEFL---ASRKXIHRDLAARN 178
Query: 542 ILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVP 601
ILL I DFGL+R +I + G L +M APE
Sbjct: 179 ILLSEKNVVKICDFGLAR--DIXKDPDXVRKGDARLPLKWM------------APETIFD 224
Query: 602 GNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVRWVKKGFEEENPLSDMVD 661
+Q DV+SFGV+L E+ + + SP I+ + R +K+G P D
Sbjct: 225 RVYTIQS-DVWSFGVLLWEIFSLGA---SPYPGVKID-EEFCRRLKEGTRMRAP--DYTT 277
Query: 662 AMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENL 702
+ Q + L C +P RP + E+L
Sbjct: 278 PEMYQTM-------------LDCWHGEPSQRPTFSELVEHL 305
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 100/218 (45%), Gaps = 33/218 (15%)
Query: 414 VLGKSGLGIVYK-VVLGNG----IPVAVRRLGEGGEQR-HREFVTEVQAIAKVKHPNIVK 467
VLG G VYK + + G IPVA++ L E + ++E + E +A V +P++ +
Sbjct: 22 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 81
Query: 468 LRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTS--LSWSTRLRIAKGTARGLAYLH 525
L +L I+ + G L + +R + L+W ++ A+G+ YL
Sbjct: 82 LLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYLE 134
Query: 526 ECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPV 585
+ R+ VH D+ N+L+ I+DFG ++L+ + GG + P+
Sbjct: 135 D---RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV--------PI 183
Query: 586 QTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT 623
+ + A E+ + Q DV+S+GV + EL+T
Sbjct: 184 K------WMALESILHRIYTHQS-DVWSYGVTVWELMT 214
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 125/305 (40%), Gaps = 56/305 (18%)
Query: 415 LGKSGLG-IVYKVVLGNG-----IPVAVRRLGEGGEQRHRE-FVTEVQAIAKV-KHPNIV 466
LG G +V G G + VAV+ L +E ++E++ ++ + +H NIV
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 467 KLRAYYWAPDEKLLISDFISNGNLANALRGR--------NGQPSTSLSWSTRLRIAKGTA 518
L L+I+++ G+L N LR + +G+P L L + A
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRP---LELRDLLHFSSQVA 170
Query: 519 RGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGA 578
+G+A+L + + +H D+ N+LL N I DFGL+R I N +
Sbjct: 171 QGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL--- 224
Query: 579 LPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIE 638
PV+ + APE+ +Q DV+S+G++L E+ S L+P +
Sbjct: 225 -----PVK------WMAPESIFDCVYTVQS-DVWSYGILLWEIF---SLGLNPYPGILVN 269
Query: 639 VPDLVRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNV 698
+ VK G++ P A K + ++ AC +P RP + +
Sbjct: 270 -SKFYKLVKDGYQMAQP------------AFAPKNIYSIMQ---ACWALEPTHRPTFQQI 313
Query: 699 SENLE 703
L+
Sbjct: 314 CSFLQ 318
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 77/182 (42%), Gaps = 26/182 (14%)
Query: 450 FVTEVQAIAKVKHPNIVKL----RAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSL 505
F E Q A + HP IV + A A ++ +++ L + + +
Sbjct: 59 FRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG-----PM 113
Query: 506 SWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITG 565
+ + + + L + H+ +H D+KP+NIL+ + DFG++R I +G
Sbjct: 114 TPKRAIEVIADACQALNFSHQ---NGIIHRDVKPANILISATNAVKVVDFGIARAIADSG 170
Query: 566 NNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGK 625
N+ + +G A Y+ P Q G+ + DVYS G VL E+LTG+
Sbjct: 171 NSVXQTAAVIGTAQ-YLSPEQAR-------------GDSVDARSDVYSLGCVLYEVLTGE 216
Query: 626 SP 627
P
Sbjct: 217 PP 218
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 78/182 (42%), Gaps = 26/182 (14%)
Query: 450 FVTEVQAIAKVKHPNIVKL----RAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSL 505
F E Q A + HP IV + A A ++ +++ L + + +
Sbjct: 59 FRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG-----PM 113
Query: 506 SWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITG 565
+ + + + L + H+ +H D+KP+NI++ + DFG++R I +G
Sbjct: 114 TPKRAIEVIADACQALNFSHQ---NGIIHRDVKPANIMISATNAVKVMDFGIARAIADSG 170
Query: 566 NNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGK 625
N+ + + +G A Y+ P Q G+ + DVYS G VL E+LTG+
Sbjct: 171 NSVTQTAAVIGTA-QYLSPEQAR-------------GDSVDARSDVYSLGCVLYEVLTGE 216
Query: 626 SP 627
P
Sbjct: 217 PP 218
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 114/283 (40%), Gaps = 51/283 (18%)
Query: 434 VAVRRLGEGGEQ-RHREFVTEVQAIAKV-KHPNIVKLRAYYWAPDEKLL-ISDFISNGNL 490
VAV+ L EG HR ++E++ + + H N+V L P L+ I++F GNL
Sbjct: 51 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNL 110
Query: 491 ANALRGRNGQ-----------PSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKP 539
+ LR + + L+ + + A+G+ +L + RK +H D+
Sbjct: 111 STYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAA 167
Query: 540 SNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEAR 599
NILL I DFGL+R +I + G L +M APE
Sbjct: 168 RNILLSEKNVVKICDFGLAR--DIXKDPDXVRKGDARLPLKWM------------APETI 213
Query: 600 VPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVRWVKKGFEEENPLSDM 659
+Q DV+SFGV+L E+ + + SP I+ + R +K+G P D
Sbjct: 214 FDRVYTIQS-DVWSFGVLLWEIFSLGA---SPYPGVKID-EEFCRRLKEGTRMRAP--DY 266
Query: 660 VDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENL 702
+ Q + L C +P RP + E+L
Sbjct: 267 TTPEMYQTM-------------LDCWHGEPSQRPTFSELVEHL 296
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 100/218 (45%), Gaps = 33/218 (15%)
Query: 414 VLGKSGLGIVYK-VVLGNG----IPVAVRRLGEGGEQR-HREFVTEVQAIAKVKHPNIVK 467
VLG G VYK + + G IPVA++ L E + ++E + E +A V +P++ +
Sbjct: 24 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 83
Query: 468 LRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTS--LSWSTRLRIAKGTARGLAYLH 525
L +L I+ + G L + +R + L+W ++ A+G+ YL
Sbjct: 84 LLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYLE 136
Query: 526 ECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPV 585
+ R+ VH D+ N+L+ I+DFG ++L+ + GG + P+
Sbjct: 137 D---RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV--------PI 185
Query: 586 QTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT 623
+ + A E+ + Q DV+S+GV + EL+T
Sbjct: 186 K------WMALESILHRIYTHQS-DVWSYGVTVWELMT 216
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 78/182 (42%), Gaps = 26/182 (14%)
Query: 450 FVTEVQAIAKVKHPNIVKL----RAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSL 505
F E Q A + HP IV + A A ++ +++ L + + +
Sbjct: 59 FRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG-----PM 113
Query: 506 SWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITG 565
+ + + + L + H+ +H D+KP+NI++ + DFG++R I +G
Sbjct: 114 TPKRAIEVIADACQALNFSHQ---NGIIHRDVKPANIMISATNAVKVMDFGIARAIADSG 170
Query: 566 NNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGK 625
N+ + + +G A Y+ P Q G+ + DVYS G VL E+LTG+
Sbjct: 171 NSVTQTAAVIGTAQ-YLSPEQAR-------------GDSVDARSDVYSLGCVLYEVLTGE 216
Query: 626 SP 627
P
Sbjct: 217 PP 218
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 78/182 (42%), Gaps = 26/182 (14%)
Query: 450 FVTEVQAIAKVKHPNIVKL----RAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSL 505
F E Q A + HP IV + A A ++ +++ L + + +
Sbjct: 59 FRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG-----PM 113
Query: 506 SWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITG 565
+ + + + L + H+ +H D+KP+NI++ + DFG++R I +G
Sbjct: 114 TPKRAIEVIADACQALNFSHQ---NGIIHRDVKPANIMISATNAVKVMDFGIARAIADSG 170
Query: 566 NNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGK 625
N+ + + +G A Y+ P Q G+ + DVYS G VL E+LTG+
Sbjct: 171 NSVTQTAAVIGTAQ-YLSPEQAR-------------GDSVDARSDVYSLGCVLYEVLTGE 216
Query: 626 SP 627
P
Sbjct: 217 PP 218
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 74/182 (40%), Gaps = 29/182 (15%)
Query: 448 REFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANAL--RGRNGQPSTSL 505
++ EV+ + + HPNIVKL L+ ++ S G + + L GR +
Sbjct: 58 QKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARA 117
Query: 506 SWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITG 565
+ + + Y C + VH D+K N+LLD D I+DFG S G
Sbjct: 118 KF-------RQIVSAVQY---CHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTF-G 166
Query: 566 NNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGK 625
N G+ PY P + + Y PE DV+S GV+L L++G
Sbjct: 167 NKLDE----FCGSPPYAAP-ELFQGKKYDGPEV-----------DVWSLGVILYTLVSGS 210
Query: 626 SP 627
P
Sbjct: 211 LP 212
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 85/197 (43%), Gaps = 19/197 (9%)
Query: 430 NGIPVAVRRLGEGGEQRH-REFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNG 488
N + VA++++ Q + + + E++ + +H NI+ + AP + + +I
Sbjct: 49 NKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDIIRAPTIEQMKDVYIVQD 108
Query: 489 NLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDF 548
+ L + LS RGL Y+H + +H D+KPSN+LL+
Sbjct: 109 LMETDLYKL--LKTQHLSNDHICYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTS 163
Query: 549 QPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQK 608
I DFGL+R+ + GF+ + T YRAPE + +
Sbjct: 164 DLKICDFGLARV----ADPDHDHTGFL---------TEYVATRWYRAPEIMLNSKGYTKS 210
Query: 609 WDVYSFGVVLLELLTGK 625
D++S G +L E+L+ +
Sbjct: 211 IDIWSVGCILAEMLSNR 227
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 90/221 (40%), Gaps = 35/221 (15%)
Query: 415 LGKSGLGIV---YKVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAY 471
LGK +V KV+ G + + + H++ E + +KHPNIV+L
Sbjct: 30 LGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 89
Query: 472 YWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRK 531
LI D ++ G L + R S + + A LH C
Sbjct: 90 ISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILE-------AVLH-CHQMG 141
Query: 532 FVHGDIKPSNILLDNDFQ---PYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTE 588
VH D+KP N+LL + + ++DFGL+ I + G + GF G
Sbjct: 142 VVHRDLKPENLLLASKLKGAAVKLADFGLA--IEVEGEQ-QAWFGFAG------------ 186
Query: 589 KTNNYRAPEA--RVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
T Y +PE + P +P+ D+++ GV+L LL G P
Sbjct: 187 -TPGYLSPEVLRKDPYGKPV---DLWACGVILYILLVGYPP 223
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 100/218 (45%), Gaps = 33/218 (15%)
Query: 414 VLGKSGLGIVYK-VVLGNG----IPVAVRRLGEGGEQR-HREFVTEVQAIAKVKHPNIVK 467
VLG G VYK + + G IPVA++ L E + ++E + E +A V +P++ +
Sbjct: 29 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 88
Query: 468 LRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTS--LSWSTRLRIAKGTARGLAYLH 525
L +L I+ + G L + +R + L+W ++ A+G+ YL
Sbjct: 89 LLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYLE 141
Query: 526 ECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPV 585
+ R+ VH D+ N+L+ I+DFG ++L+ + GG + P+
Sbjct: 142 D---RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV--------PI 190
Query: 586 QTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT 623
+ + A E+ + Q DV+S+GV + EL+T
Sbjct: 191 K------WMALESILHRIYTHQS-DVWSYGVTVWELMT 221
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 61/128 (47%), Gaps = 24/128 (18%)
Query: 519 RGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGA 578
RGL Y+H +H D+KPSN+ ++ D + I DFGL+R + G++
Sbjct: 143 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR------HTADEMTGYVA-- 191
Query: 579 LPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIE 638
T YRAPE + Q D++S G ++ ELLTG++ L P T +
Sbjct: 192 -----------TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT--LFPGTDHIDQ 238
Query: 639 VPDLVRWV 646
+ ++R V
Sbjct: 239 LKLILRLV 246
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 61/128 (47%), Gaps = 24/128 (18%)
Query: 519 RGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGA 578
RGL Y+H +H D+KPSN+ ++ D + I DFGL+R + G++
Sbjct: 147 RGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLAR------HTDDEMTGYVA-- 195
Query: 579 LPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIE 638
T YRAPE + Q D++S G ++ ELLTG++ L P T +
Sbjct: 196 -----------TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT--LFPGTDHIDQ 242
Query: 639 VPDLVRWV 646
+ ++R V
Sbjct: 243 LKLILRLV 250
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 128/314 (40%), Gaps = 62/314 (19%)
Query: 406 ELLRASAYVLGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHRE-FVTEVQAIAKV-KHP 463
+++ A+AY L KS + VAV+ L RE ++E++ ++ + H
Sbjct: 38 KVVEATAYGLIKSDAAMT----------VAVKMLKPSAHLTEREALMSELKVLSYLGNHM 87
Query: 464 NIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLR----------- 512
NIV L L+I+++ G+L N LR + S + +
Sbjct: 88 NIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDL 147
Query: 513 --IAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSS 570
+ A+G+A+L + + +H D+ NILL + I DFGL+R I N
Sbjct: 148 LSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK 204
Query: 571 SGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELS 630
+ PV+ + APE+ + DV+S+G+ L EL + S S
Sbjct: 205 GNARL--------PVK------WMAPESIFNCVYTFES-DVWSYGIFLWELFSLGS---S 246
Query: 631 PTTSTSIEVPDLVRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPE 690
P ++ + +K+GF +L HA E ++ + C +ADP
Sbjct: 247 PYPGMPVD-SKFYKMIKEGFR------------MLSPEHAPAE---MYDIMKTCWDADPL 290
Query: 691 VRPRMKNVSENLER 704
RP K + + +E+
Sbjct: 291 KRPTFKQIVQLIEK 304
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 95/222 (42%), Gaps = 33/222 (14%)
Query: 430 NGIPVAVRRLGEGGEQ--RHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISN 487
G+ VAV++L + + E++ + +KH N++ L + P L + ++
Sbjct: 46 TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVF-TPARSL---EEFND 101
Query: 488 GNLANALRG---RNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILL 544
L L G N S L+ + RGL Y+H +H D+KPSN+ +
Sbjct: 102 VYLVTHLMGADLNNIVKSQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAV 158
Query: 545 DNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNR 604
+ D + I DFGL R + G++ T YRAPE +
Sbjct: 159 NEDSELKILDFGLCR------HTDDEMTGYVA-------------TRWYRAPEIMLNWMH 199
Query: 605 PMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVRWV 646
Q D++S G ++ ELLTG++ L P T ++ ++R V
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRT--LFPGTDHIDQLKLILRLV 239
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 89/196 (45%), Gaps = 39/196 (19%)
Query: 452 TEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALRG-RNGQPSTSLSWSTR 510
TE++ + K+ HP I+K++ ++ A D +++ + + G L + + G + + +T + +
Sbjct: 64 TEIEILKKLNHPCIIKIKNFFDAEDYYIVL-ELMEGGELFDKVVGNKRLKEATCKLYFYQ 122
Query: 511 LRIAKGTARGLAYLHECSPRKFVHGDIKPSNILL---DNDFQPYISDFGLSRLINITGNN 567
+ +A + YLHE +H D+KP N+LL + D I+DFG S+++ T
Sbjct: 123 MLLA------VQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLM 173
Query: 568 PSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVP-----GNRPMQKWDVYSFGVVLLELL 622
+ G T Y APE V NR + W S GV+L L
Sbjct: 174 RTLCG-----------------TPTYLAPEVLVSVGTAGYNRAVDCW---SLGVILFICL 213
Query: 623 TGKSPELSPTTSTSIE 638
+G P T S++
Sbjct: 214 SGYPPFSEHRTQVSLK 229
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 61/128 (47%), Gaps = 24/128 (18%)
Query: 519 RGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGA 578
RGL Y+H +H D+KPSN+ ++ D + I DFGL+R + G++
Sbjct: 143 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR------HTADEMTGYVA-- 191
Query: 579 LPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIE 638
T YRAPE + Q D++S G ++ ELLTG++ L P T +
Sbjct: 192 -----------TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT--LFPGTDHIDQ 238
Query: 639 VPDLVRWV 646
+ ++R V
Sbjct: 239 LKLILRLV 246
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 14/96 (14%)
Query: 532 FVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTN 591
+H D+KP+NI++ + DFG++R I +GN+ + + +G A Y+ P Q
Sbjct: 154 IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTA-QYLSPEQAR--- 209
Query: 592 NYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
G+ + DVYS G VL E+LTG+ P
Sbjct: 210 ----------GDSVDARSDVYSLGCVLYEVLTGEPP 235
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 89/196 (45%), Gaps = 39/196 (19%)
Query: 452 TEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALRG-RNGQPSTSLSWSTR 510
TE++ + K+ HP I+K++ ++ A D +++ + + G L + + G + + +T + +
Sbjct: 64 TEIEILKKLNHPCIIKIKNFFDAEDYYIVL-ELMEGGELFDKVVGNKRLKEATCKLYFYQ 122
Query: 511 LRIAKGTARGLAYLHECSPRKFVHGDIKPSNILL---DNDFQPYISDFGLSRLINITGNN 567
+ +A + YLHE +H D+KP N+LL + D I+DFG S+++ T
Sbjct: 123 MLLA------VQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLM 173
Query: 568 PSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVP-----GNRPMQKWDVYSFGVVLLELL 622
+ G T Y APE V NR + W S GV+L L
Sbjct: 174 RTLCG-----------------TPTYLAPEVLVSVGTAGYNRAVDCW---SLGVILFICL 213
Query: 623 TGKSPELSPTTSTSIE 638
+G P T S++
Sbjct: 214 SGYPPFSEHRTQVSLK 229
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 89/196 (45%), Gaps = 39/196 (19%)
Query: 452 TEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALRG-RNGQPSTSLSWSTR 510
TE++ + K+ HP I+K++ ++ A D +++ + + G L + + G + + +T + +
Sbjct: 64 TEIEILKKLNHPCIIKIKNFFDAEDYYIVL-ELMEGGELFDKVVGNKRLKEATCKLYFYQ 122
Query: 511 LRIAKGTARGLAYLHECSPRKFVHGDIKPSNILL---DNDFQPYISDFGLSRLINITGNN 567
+ +A + YLHE +H D+KP N+LL + D I+DFG S+++ T
Sbjct: 123 MLLA------VQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLM 173
Query: 568 PSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVP-----GNRPMQKWDVYSFGVVLLELL 622
+ G T Y APE V NR + W S GV+L L
Sbjct: 174 RTLCG-----------------TPTYLAPEVLVSVGTAGYNRAVDCW---SLGVILFICL 213
Query: 623 TGKSPELSPTTSTSIE 638
+G P T S++
Sbjct: 214 SGYPPFSEHRTQVSLK 229
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 61/128 (47%), Gaps = 24/128 (18%)
Query: 519 RGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGA 578
RGL Y+H +H D+KPSN+ ++ D + I DFGL+R + G++
Sbjct: 141 RGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLAR------HTDDEMTGYVA-- 189
Query: 579 LPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIE 638
T YRAPE + Q D++S G ++ ELLTG++ L P T +
Sbjct: 190 -----------TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT--LFPGTDHIDQ 236
Query: 639 VPDLVRWV 646
+ ++R V
Sbjct: 237 LKLILRLV 244
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 96/222 (43%), Gaps = 33/222 (14%)
Query: 430 NGIPVAVRRLGEGGEQ--RHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISN 487
G+ VAV++L + + + E++ + +KH N++ L + P L + ++
Sbjct: 58 TGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVF-TPARSL---EEFND 113
Query: 488 GNLANALRG---RNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILL 544
L L G N L+ + RGL Y+H +H D+KPSN+ +
Sbjct: 114 VYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAV 170
Query: 545 DNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNR 604
+ D + I DFGL+R + G++ T YRAPE +
Sbjct: 171 NEDCELKILDFGLAR------HTDDEMTGYVA-------------TRWYRAPEIMLNWMH 211
Query: 605 PMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVRWV 646
Q D++S G ++ ELLTG++ L P T ++ ++R V
Sbjct: 212 YNQTVDIWSVGCIMAELLTGRT--LFPGTDHIDQLKLILRLV 251
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 61/128 (47%), Gaps = 24/128 (18%)
Query: 519 RGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGA 578
RGL Y+H +H D+KPSN+ ++ D + I DFGL+R + G++
Sbjct: 143 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR------HTADEMTGYVA-- 191
Query: 579 LPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIE 638
T YRAPE + Q D++S G ++ ELLTG++ L P T +
Sbjct: 192 -----------TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT--LFPGTDHIDQ 238
Query: 639 VPDLVRWV 646
+ ++R V
Sbjct: 239 LKLILRLV 246
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 89/196 (45%), Gaps = 39/196 (19%)
Query: 452 TEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALRG-RNGQPSTSLSWSTR 510
TE++ + K+ HP I+K++ ++ A D +++ + + G L + + G + + +T + +
Sbjct: 70 TEIEILKKLNHPCIIKIKNFFDAEDYYIVL-ELMEGGELFDKVVGNKRLKEATCKLYFYQ 128
Query: 511 LRIAKGTARGLAYLHECSPRKFVHGDIKPSNILL---DNDFQPYISDFGLSRLINITGNN 567
+ +A + YLHE +H D+KP N+LL + D I+DFG S+++ T
Sbjct: 129 MLLA------VQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLM 179
Query: 568 PSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVP-----GNRPMQKWDVYSFGVVLLELL 622
+ G T Y APE V NR + W S GV+L L
Sbjct: 180 RTLCG-----------------TPTYLAPEVLVSVGTAGYNRAVDCW---SLGVILFICL 219
Query: 623 TGKSPELSPTTSTSIE 638
+G P T S++
Sbjct: 220 SGYPPFSEHRTQVSLK 235
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 128/314 (40%), Gaps = 62/314 (19%)
Query: 406 ELLRASAYVLGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHRE-FVTEVQAIAKV-KHP 463
+++ A+AY L KS + VAV+ L RE ++E++ ++ + H
Sbjct: 61 KVVEATAYGLIKSDAAMT----------VAVKMLKPSAHLTEREALMSELKVLSYLGNHM 110
Query: 464 NIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLR----------- 512
NIV L L+I+++ G+L N LR + S + +
Sbjct: 111 NIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDL 170
Query: 513 --IAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSS 570
+ A+G+A+L + + +H D+ NILL + I DFGL+R I N
Sbjct: 171 LSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVK 227
Query: 571 SGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELS 630
+ PV+ + APE+ + DV+S+G+ L EL + S S
Sbjct: 228 GNARL--------PVK------WMAPESIFNCVYTFES-DVWSYGIFLWELFSLGS---S 269
Query: 631 PTTSTSIEVPDLVRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPE 690
P ++ + +K+GF +L HA E ++ + C +ADP
Sbjct: 270 PYPGMPVD-SKFYKMIKEGFR------------MLSPEHAPAE---MYDIMKTCWDADPL 313
Query: 691 VRPRMKNVSENLER 704
RP K + + +E+
Sbjct: 314 KRPTFKQIVQLIEK 327
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 61/128 (47%), Gaps = 24/128 (18%)
Query: 519 RGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGA 578
RGL Y+H +H D+KPSN+ ++ D + I DFGL+R + G++
Sbjct: 141 RGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLAR------HTDDEMTGYVA-- 189
Query: 579 LPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIE 638
T YRAPE + Q D++S G ++ ELLTG++ L P T +
Sbjct: 190 -----------TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT--LFPGTDHIDQ 236
Query: 639 VPDLVRWV 646
+ ++R V
Sbjct: 237 LKLILRLV 244
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 61/128 (47%), Gaps = 24/128 (18%)
Query: 519 RGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGA 578
RGL Y+H +H D+KPSN+ ++ D + I DFGL+R + G++
Sbjct: 136 RGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLAR------HTDDEMTGYVA-- 184
Query: 579 LPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIE 638
T YRAPE + Q D++S G ++ ELLTG++ L P T +
Sbjct: 185 -----------TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT--LFPGTDHIDQ 231
Query: 639 VPDLVRWV 646
+ ++R V
Sbjct: 232 LKLILRLV 239
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 89/196 (45%), Gaps = 39/196 (19%)
Query: 452 TEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALRG-RNGQPSTSLSWSTR 510
TE++ + K+ HP I+K++ ++ A D +++ + + G L + + G + + +T + +
Sbjct: 63 TEIEILKKLNHPCIIKIKNFFDAEDYYIVL-ELMEGGELFDKVVGNKRLKEATCKLYFYQ 121
Query: 511 LRIAKGTARGLAYLHECSPRKFVHGDIKPSNILL---DNDFQPYISDFGLSRLINITGNN 567
+ +A + YLHE +H D+KP N+LL + D I+DFG S+++ T
Sbjct: 122 MLLA------VQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLM 172
Query: 568 PSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVP-----GNRPMQKWDVYSFGVVLLELL 622
+ G T Y APE V NR + W S GV+L L
Sbjct: 173 RTLCG-----------------TPTYLAPEVLVSVGTAGYNRAVDCW---SLGVILFICL 212
Query: 623 TGKSPELSPTTSTSIE 638
+G P T S++
Sbjct: 213 SGYPPFSEHRTQVSLK 228
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 85/204 (41%), Gaps = 36/204 (17%)
Query: 449 EFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWS 508
+ + EV + + HPNI+KL ++ L+ + G L + + R +
Sbjct: 82 KLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHR-----MKFNEV 136
Query: 509 TRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDN---DFQPYISDFGLSRLINITG 565
I K G+ YLH+ VH D+KP N+LL++ D I DFGLS +
Sbjct: 137 DAAVIIKQVLSGVTYLHK---HNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFE--- 190
Query: 566 NNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGK 625
N +G A Y APE V + +K DV+S GV+L LL G
Sbjct: 191 -NQKKMKERLGTAY-------------YIAPE--VLRKKYDEKCDVWSIGVILFILLAGY 234
Query: 626 SPELSPTTSTSIEVPDLVRWVKKG 649
P T +++R V+KG
Sbjct: 235 PPFGGQTDQ------EILRKVEKG 252
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 61/128 (47%), Gaps = 24/128 (18%)
Query: 519 RGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGA 578
RGL Y+H +H D+KPSN+ ++ D + I DFGL+R + G++
Sbjct: 136 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR------HTDDEMTGYVA-- 184
Query: 579 LPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIE 638
T YRAPE + Q D++S G ++ ELLTG++ L P T +
Sbjct: 185 -----------TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT--LFPGTDHIDQ 231
Query: 639 VPDLVRWV 646
+ ++R V
Sbjct: 232 LKLILRLV 239
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 95/222 (42%), Gaps = 33/222 (14%)
Query: 430 NGIPVAVRRLGEGGEQ--RHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISN 487
G+ VAV++L + + E++ + +KH N++ L + P L + ++
Sbjct: 46 TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVF-TPARSL---EEFND 101
Query: 488 GNLANALRG---RNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILL 544
L L G N L+ + RGL Y+H +H D+KPSN+ +
Sbjct: 102 VYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAV 158
Query: 545 DNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNR 604
+ D + I DFGL+R + G++ T YRAPE +
Sbjct: 159 NEDCELKILDFGLAR------HTDDEMTGYVA-------------TRWYRAPEIMLNWMH 199
Query: 605 PMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVRWV 646
Q D++S G ++ ELLTG++ L P T ++ ++R V
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRT--LFPGTDHIDQLKLILRLV 239
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 56/109 (51%), Gaps = 9/109 (8%)
Query: 517 TARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMG 576
T R + LH + +H D+KPSN+L++++ + DFGL+R+I+ + + S G
Sbjct: 121 TLRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQS 177
Query: 577 GALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGK 625
G Y+ T YRAPE + + + DV+S G +L EL +
Sbjct: 178 GMTEYV------ATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 61/128 (47%), Gaps = 24/128 (18%)
Query: 519 RGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGA 578
RGL Y+H +H D+KPSN+ ++ D + I DFGL+R + G++
Sbjct: 136 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR------HTDDEMTGYVA-- 184
Query: 579 LPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIE 638
T YRAPE + Q D++S G ++ ELLTG++ L P T +
Sbjct: 185 -----------TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT--LFPGTDHIDQ 231
Query: 639 VPDLVRWV 646
+ ++R V
Sbjct: 232 LKLILRLV 239
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 61/128 (47%), Gaps = 24/128 (18%)
Query: 519 RGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGA 578
RGL Y+H +H D+KPSN+ ++ D + I DFGL+R + G++
Sbjct: 143 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR------HTDDEMTGYVA-- 191
Query: 579 LPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIE 638
T YRAPE + Q D++S G ++ ELLTG++ L P T +
Sbjct: 192 -----------TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT--LFPGTDHIDQ 238
Query: 639 VPDLVRWV 646
+ ++R V
Sbjct: 239 LKLILRLV 246
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 113/283 (39%), Gaps = 51/283 (18%)
Query: 434 VAVRRLGEGGEQ-RHREFVTEVQAIAKV-KHPNIVKLRAYYWAPDEKLL-ISDFISNGNL 490
VAV+ L EG HR ++E++ + + H N+V L P L+ I +F GNL
Sbjct: 60 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 119
Query: 491 ANALRGRNGQ-----------PSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKP 539
+ LR + + L+ + + A+G+ +L + RK +H D+
Sbjct: 120 STYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAA 176
Query: 540 SNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEAR 599
NILL I DFGL+R +I + G L +M APE
Sbjct: 177 RNILLSEKNVVKICDFGLAR--DIXKDPDXVRKGDARLPLKWM------------APETI 222
Query: 600 VPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVRWVKKGFEEENPLSDM 659
+Q DV+SFGV+L E+ + + SP I+ + R +K+G P D
Sbjct: 223 FDRVYTIQS-DVWSFGVLLWEIFSLGA---SPYPGVKID-EEFCRRLKEGTRMRAP--DY 275
Query: 660 VDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENL 702
+ Q + L C +P RP + E+L
Sbjct: 276 TTPEMYQTM-------------LDCWHGEPSQRPTFSELVEHL 305
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 128/314 (40%), Gaps = 62/314 (19%)
Query: 406 ELLRASAYVLGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHRE-FVTEVQAIAKV-KHP 463
+++ A+AY L KS + VAV+ L RE ++E++ ++ + H
Sbjct: 54 KVVEATAYGLIKSDAAMT----------VAVKMLKPSAHLTEREALMSELKVLSYLGNHM 103
Query: 464 NIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLR----------- 512
NIV L L+I+++ G+L N LR + S + +
Sbjct: 104 NIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDL 163
Query: 513 --IAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSS 570
+ A+G+A+L + + +H D+ NILL + I DFGL+R I N
Sbjct: 164 LSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK 220
Query: 571 SGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELS 630
+ PV+ + APE+ + DV+S+G+ L EL + S S
Sbjct: 221 GNARL--------PVK------WMAPESIFNCVYTFES-DVWSYGIFLWELFSLGS---S 262
Query: 631 PTTSTSIEVPDLVRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPE 690
P ++ + +K+GF +L HA E ++ + C +ADP
Sbjct: 263 PYPGMPVD-SKFYKMIKEGFR------------MLSPEHAPAE---MYDIMKTCWDADPL 306
Query: 691 VRPRMKNVSENLER 704
RP K + + +E+
Sbjct: 307 KRPTFKQIVQLIEK 320
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 61/128 (47%), Gaps = 24/128 (18%)
Query: 519 RGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGA 578
RGL Y+H +H D+KPSN+ ++ D + I DFGL+R + G++
Sbjct: 136 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR------HTDDEMTGYVA-- 184
Query: 579 LPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIE 638
T YRAPE + Q D++S G ++ ELLTG++ L P T +
Sbjct: 185 -----------TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT--LFPGTDHIDQ 231
Query: 639 VPDLVRWV 646
+ ++R V
Sbjct: 232 LKLILRLV 239
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 61/128 (47%), Gaps = 24/128 (18%)
Query: 519 RGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGA 578
RGL Y+H +H D+KPSN+ ++ D + I DFGL+R + G++
Sbjct: 146 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR------HTDDEMTGYVA-- 194
Query: 579 LPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIE 638
T YRAPE + Q D++S G ++ ELLTG++ L P T +
Sbjct: 195 -----------TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT--LFPGTDHIDQ 241
Query: 639 VPDLVRWV 646
+ ++R V
Sbjct: 242 LKLILRLV 249
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 61/128 (47%), Gaps = 24/128 (18%)
Query: 519 RGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGA 578
RGL Y+H +H D+KPSN+ ++ D + I DFGL+R + G++
Sbjct: 141 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR------HTDDEMTGYVA-- 189
Query: 579 LPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIE 638
T YRAPE + Q D++S G ++ ELLTG++ L P T +
Sbjct: 190 -----------TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT--LFPGTDHIDQ 236
Query: 639 VPDLVRWV 646
+ ++R V
Sbjct: 237 LKLILRLV 244
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 61/128 (47%), Gaps = 24/128 (18%)
Query: 519 RGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGA 578
RGL Y+H +H D+KPSN+ ++ D + I DFGL+R + G++
Sbjct: 135 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR------HTDDEMTGYVA-- 183
Query: 579 LPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIE 638
T YRAPE + Q D++S G ++ ELLTG++ L P T +
Sbjct: 184 -----------TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT--LFPGTDHIDQ 230
Query: 639 VPDLVRWV 646
+ ++R V
Sbjct: 231 LKLILRLV 238
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 85/219 (38%), Gaps = 30/219 (13%)
Query: 452 TEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRL 511
TE+ + +P++V ++ D ++ + +L + R + R
Sbjct: 91 TEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMR- 149
Query: 512 RIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSS 571
T +G+ YLH + +H D+K N+ L++D I DFGL+ I G +
Sbjct: 150 ----QTIQGVQYLHN---NRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTL 202
Query: 572 GGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSP 631
G T NY APE + D++S G +L LL GK P
Sbjct: 203 CG----------------TPNYIAPEVLCKKGHSFE-VDIWSLGCILYTLLVGKPP---- 241
Query: 632 TTSTSIEVPDLVRWVKKGFEEENPLSDMVDAMLLQEVHA 670
TS +R K + ++ + A++ + +HA
Sbjct: 242 -FETSCLKETYIRIKKNEYSVPRHINPVASALIRRMLHA 279
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 61/128 (47%), Gaps = 24/128 (18%)
Query: 519 RGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGA 578
RGL Y+H +H D+KPSN+ ++ D + I DFGL+R + G++
Sbjct: 136 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR------HTDDEMTGYVA-- 184
Query: 579 LPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIE 638
T YRAPE + Q D++S G ++ ELLTG++ L P T +
Sbjct: 185 -----------TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT--LFPGTDHIDQ 231
Query: 639 VPDLVRWV 646
+ ++R V
Sbjct: 232 LKLILRLV 239
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 61/128 (47%), Gaps = 24/128 (18%)
Query: 519 RGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGA 578
RGL Y+H +H D+KPSN+ ++ D + I DFGL+R + G++
Sbjct: 147 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR------HTDDEMTGYVA-- 195
Query: 579 LPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIE 638
T YRAPE + Q D++S G ++ ELLTG++ L P T +
Sbjct: 196 -----------TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT--LFPGTDHIDQ 242
Query: 639 VPDLVRWV 646
+ ++R V
Sbjct: 243 LKLILRLV 250
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 61/128 (47%), Gaps = 24/128 (18%)
Query: 519 RGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGA 578
RGL Y+H +H D+KPSN+ ++ D + I DFGL+R + G++
Sbjct: 136 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR------HTDDEMTGYVA-- 184
Query: 579 LPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIE 638
T YRAPE + Q D++S G ++ ELLTG++ L P T +
Sbjct: 185 -----------TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT--LFPGTDHIDQ 231
Query: 639 VPDLVRWV 646
+ ++R V
Sbjct: 232 LKLILRLV 239
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 61/128 (47%), Gaps = 24/128 (18%)
Query: 519 RGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGA 578
RGL Y+H +H D+KPSN+ ++ D + I DFGL+R + G++
Sbjct: 138 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR------HTDDEMTGYVA-- 186
Query: 579 LPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIE 638
T YRAPE + Q D++S G ++ ELLTG++ L P T +
Sbjct: 187 -----------TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT--LFPGTDHIDQ 233
Query: 639 VPDLVRWV 646
+ ++R V
Sbjct: 234 LKLILRLV 241
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 99/218 (45%), Gaps = 33/218 (15%)
Query: 414 VLGKSGLGIVYK-VVLGNG----IPVAVRRLGEGGEQR-HREFVTEVQAIAKVKHPNIVK 467
VL G VYK + + G IPVA++ L E + ++E + E +A V +P++ +
Sbjct: 29 VLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 88
Query: 468 LRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTS--LSWSTRLRIAKGTARGLAYLH 525
L +L I + G L + +R + L+W ++ A+G+ YL
Sbjct: 89 LLGICLTSTVQL-IMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYLE 141
Query: 526 ECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPV 585
+ R+ VH D+ N+L+ I+DFGL++L+ + GG + P+
Sbjct: 142 D---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--------PI 190
Query: 586 QTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT 623
+ + A E+ + Q DV+S+GV + EL+T
Sbjct: 191 K------WMALESILHRIYTHQS-DVWSYGVTVWELMT 221
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 128/314 (40%), Gaps = 62/314 (19%)
Query: 406 ELLRASAYVLGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHRE-FVTEVQAIAKV-KHP 463
+++ A+AY L KS + VAV+ L RE ++E++ ++ + H
Sbjct: 56 KVVEATAYGLIKSDAAMT----------VAVKMLKPSAHLTEREALMSELKVLSYLGNHM 105
Query: 464 NIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLR----------- 512
NIV L L+I+++ G+L N LR + S + +
Sbjct: 106 NIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDL 165
Query: 513 --IAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSS 570
+ A+G+A+L + + +H D+ NILL + I DFGL+R I N
Sbjct: 166 LSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK 222
Query: 571 SGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELS 630
+ PV+ + APE+ + DV+S+G+ L EL + S S
Sbjct: 223 GNARL--------PVK------WMAPESIFNCVYTFES-DVWSYGIFLWELFSLGS---S 264
Query: 631 PTTSTSIEVPDLVRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPE 690
P ++ + +K+GF +L HA E ++ + C +ADP
Sbjct: 265 PYPGMPVD-SKFYKMIKEGFR------------MLSPEHAPAE---MYDIMKTCWDADPL 308
Query: 691 VRPRMKNVSENLER 704
RP K + + +E+
Sbjct: 309 KRPTFKQIVQLIEK 322
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 61/128 (47%), Gaps = 24/128 (18%)
Query: 519 RGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGA 578
RGL Y+H +H D+KPSN+ ++ D + I DFGL+R + G++
Sbjct: 148 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR------HTDDEMTGYVA-- 196
Query: 579 LPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIE 638
T YRAPE + Q D++S G ++ ELLTG++ L P T +
Sbjct: 197 -----------TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT--LFPGTDHIDQ 243
Query: 639 VPDLVRWV 646
+ ++R V
Sbjct: 244 LKLILRLV 251
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 95/222 (42%), Gaps = 33/222 (14%)
Query: 430 NGIPVAVRRLGEGGEQ--RHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISN 487
G+ VAV++L + + E++ + +KH N++ L + P L + ++
Sbjct: 51 TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVF-TPARSL---EEFND 106
Query: 488 GNLANALRG---RNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILL 544
L L G N L+ + RGL Y+H +H D+KPSN+ +
Sbjct: 107 VYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAV 163
Query: 545 DNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNR 604
+ D + I DFGL+R + G++ T YRAPE +
Sbjct: 164 NEDCELKILDFGLAR------HTDDEMTGYVA-------------TRWYRAPEIMLNWMH 204
Query: 605 PMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVRWV 646
Q D++S G ++ ELLTG++ L P T ++ ++R V
Sbjct: 205 YNQTVDIWSVGCIMAELLTGRT--LFPGTDHIDQLKLILRLV 244
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 61/128 (47%), Gaps = 24/128 (18%)
Query: 519 RGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGA 578
RGL Y+H +H D+KPSN+ ++ D + I DFGL+R + G++
Sbjct: 138 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR------HTDDEMTGYVA-- 186
Query: 579 LPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIE 638
T YRAPE + Q D++S G ++ ELLTG++ L P T +
Sbjct: 187 -----------TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT--LFPGTDHIDQ 233
Query: 639 VPDLVRWV 646
+ ++R V
Sbjct: 234 LKLILRLV 241
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 61/128 (47%), Gaps = 24/128 (18%)
Query: 519 RGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGA 578
RGL Y+H +H D+KPSN+ ++ D + I DFGL+R + G++
Sbjct: 136 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR------HTDDEMTGYVA-- 184
Query: 579 LPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIE 638
T YRAPE + Q D++S G ++ ELLTG++ L P T +
Sbjct: 185 -----------TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT--LFPGTDHIDQ 231
Query: 639 VPDLVRWV 646
+ ++R V
Sbjct: 232 LKLILRLV 239
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 61/128 (47%), Gaps = 24/128 (18%)
Query: 519 RGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGA 578
RGL Y+H +H D+KPSN+ ++ D + I DFGL+R + G++
Sbjct: 148 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR------HTDDEMTGYVA-- 196
Query: 579 LPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIE 638
T YRAPE + Q D++S G ++ ELLTG++ L P T +
Sbjct: 197 -----------TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT--LFPGTDHIDQ 243
Query: 639 VPDLVRWV 646
+ ++R V
Sbjct: 244 LKLILRLV 251
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 61/128 (47%), Gaps = 24/128 (18%)
Query: 519 RGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGA 578
RGL Y+H +H D+KPSN+ ++ D + I DFGL+R + G++
Sbjct: 142 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR------HTDDEMTGYVA-- 190
Query: 579 LPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIE 638
T YRAPE + Q D++S G ++ ELLTG++ L P T +
Sbjct: 191 -----------TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT--LFPGTDHIDQ 237
Query: 639 VPDLVRWV 646
+ ++R V
Sbjct: 238 LKLILRLV 245
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 61/128 (47%), Gaps = 24/128 (18%)
Query: 519 RGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGA 578
RGL Y+H +H D+KPSN+ ++ D + I DFGL+R + G++
Sbjct: 136 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR------HTDDEMTGYVA-- 184
Query: 579 LPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIE 638
T YRAPE + Q D++S G ++ ELLTG++ L P T +
Sbjct: 185 -----------TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT--LFPGTDHIDQ 231
Query: 639 VPDLVRWV 646
+ ++R V
Sbjct: 232 LKLILRLV 239
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 83/198 (41%), Gaps = 31/198 (15%)
Query: 434 VAVRRLGEGGEQ--RHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLA 491
VAV++L + R E++ + +KH N++ L + I DF S L
Sbjct: 48 VAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDVFTPATS---IEDF-SEVYLV 103
Query: 492 NALRG---RNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDF 548
L G N +LS + RGL Y+H +H D+KPSN+ ++ D
Sbjct: 104 TTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHSAG---IIHRDLKPSNVAVNEDC 160
Query: 549 QPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQK 608
+ I DFGL+R + G++ T YRAPE + Q
Sbjct: 161 ELRILDFGLARQAD------EEMTGYVA-------------TRWYRAPEIMLNWMHYNQT 201
Query: 609 WDVYSFGVVLLELLTGKS 626
D++S G ++ ELL GK+
Sbjct: 202 VDIWSVGCIMAELLQGKA 219
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 95/222 (42%), Gaps = 33/222 (14%)
Query: 430 NGIPVAVRRLGEGGEQ--RHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISN 487
G+ VAV++L + + E++ + +KH N++ L + P L + ++
Sbjct: 69 TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVF-TPARSL---EEFND 124
Query: 488 GNLANALRG---RNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILL 544
L L G N L+ + RGL Y+H +H D+KPSN+ +
Sbjct: 125 VYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAV 181
Query: 545 DNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNR 604
+ D + I DFGL+R + G++ T YRAPE +
Sbjct: 182 NEDCELKILDFGLAR------HTDDEMXGYVA-------------TRWYRAPEIMLNWMH 222
Query: 605 PMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVRWV 646
Q D++S G ++ ELLTG++ L P T ++ ++R V
Sbjct: 223 YNQTVDIWSVGCIMAELLTGRT--LFPGTDHIDQLKLILRLV 262
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 84/219 (38%), Gaps = 30/219 (13%)
Query: 452 TEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRL 511
TE+ + +P++V ++ D ++ + +L + R + R
Sbjct: 75 TEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMR- 133
Query: 512 RIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSS 571
T +G+ YLH + +H D+K N+ L++D I DFGL+ I G
Sbjct: 134 ----QTIQGVQYLHN---NRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDL 186
Query: 572 GGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSP 631
G T NY APE + D++S G +L LL GK P
Sbjct: 187 CG----------------TPNYIAPEVLCKKGHSFE-VDIWSLGCILYTLLVGKPP---- 225
Query: 632 TTSTSIEVPDLVRWVKKGFEEENPLSDMVDAMLLQEVHA 670
TS +R K + ++ + A++ + +HA
Sbjct: 226 -FETSCLKETYIRIKKNEYSVPRHINPVASALIRRMLHA 263
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 61/128 (47%), Gaps = 24/128 (18%)
Query: 519 RGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGA 578
RGL Y+H +H D+KPSN+ ++ D + I DFGL+R + G++
Sbjct: 156 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR------HTDDEMTGYVA-- 204
Query: 579 LPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIE 638
T YRAPE + Q D++S G ++ ELLTG++ L P T +
Sbjct: 205 -----------TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT--LFPGTDHIDQ 251
Query: 639 VPDLVRWV 646
+ ++R V
Sbjct: 252 LKLILRLV 259
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 61/128 (47%), Gaps = 24/128 (18%)
Query: 519 RGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGA 578
RGL Y+H +H D+KPSN+ ++ D + I DFGL+R + G++
Sbjct: 159 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR------HTDDEMTGYVA-- 207
Query: 579 LPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIE 638
T YRAPE + Q D++S G ++ ELLTG++ L P T +
Sbjct: 208 -----------TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT--LFPGTDHIDQ 254
Query: 639 VPDLVRWV 646
+ ++R V
Sbjct: 255 LKLILRLV 262
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 61/128 (47%), Gaps = 24/128 (18%)
Query: 519 RGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGA 578
RGL Y+H +H D+KPSN+ ++ D + I DFGL+R + G++
Sbjct: 142 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR------HTDDEMTGYVA-- 190
Query: 579 LPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIE 638
T YRAPE + Q D++S G ++ ELLTG++ L P T +
Sbjct: 191 -----------TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT--LFPGTDHIDQ 237
Query: 639 VPDLVRWV 646
+ ++R V
Sbjct: 238 LKLILRLV 245
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 61/128 (47%), Gaps = 24/128 (18%)
Query: 519 RGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGA 578
RGL Y+H +H D+KPSN+ ++ D + I DFGL+R + G++
Sbjct: 156 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR------HTDDEMTGYVA-- 204
Query: 579 LPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIE 638
T YRAPE + Q D++S G ++ ELLTG++ L P T +
Sbjct: 205 -----------TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT--LFPGTDHIDQ 251
Query: 639 VPDLVRWV 646
+ ++R V
Sbjct: 252 LKLILRLV 259
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 61/128 (47%), Gaps = 24/128 (18%)
Query: 519 RGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGA 578
RGL Y+H +H D+KPSN+ ++ D + I DFGL+R + G++
Sbjct: 136 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR------HTDDEMTGYVA-- 184
Query: 579 LPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIE 638
T YRAPE + Q D++S G ++ ELLTG++ L P T +
Sbjct: 185 -----------TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT--LFPGTDHIDQ 231
Query: 639 VPDLVRWV 646
+ ++R V
Sbjct: 232 LKLILRLV 239
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 61/128 (47%), Gaps = 24/128 (18%)
Query: 519 RGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGA 578
RGL Y+H +H D+KPSN+ ++ D + I DFGL+R + G++
Sbjct: 138 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR------HTDDEMTGYVA-- 186
Query: 579 LPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIE 638
T YRAPE + Q D++S G ++ ELLTG++ L P T +
Sbjct: 187 -----------TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT--LFPGTDHIDQ 233
Query: 639 VPDLVRWV 646
+ ++R V
Sbjct: 234 LKLILRLV 241
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 61/128 (47%), Gaps = 24/128 (18%)
Query: 519 RGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGA 578
RGL Y+H +H D+KPSN+ ++ D + I DFGL+R + G++
Sbjct: 155 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR------HTDDEMTGYVA-- 203
Query: 579 LPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIE 638
T YRAPE + Q D++S G ++ ELLTG++ L P T +
Sbjct: 204 -----------TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT--LFPGTDHIDQ 250
Query: 639 VPDLVRWV 646
+ ++R V
Sbjct: 251 LKLILRLV 258
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 128/314 (40%), Gaps = 62/314 (19%)
Query: 406 ELLRASAYVLGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHRE-FVTEVQAIAKV-KHP 463
+++ A+AY L KS + VAV+ L RE ++E++ ++ + H
Sbjct: 61 KVVEATAYGLIKSDAAMT----------VAVKMLKPSAHLTEREALMSELKVLSYLGNHM 110
Query: 464 NIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLR----------- 512
NIV L L+I+++ G+L N LR + S + +
Sbjct: 111 NIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDL 170
Query: 513 --IAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSS 570
+ A+G+A+L + + +H D+ NILL + I DFGL+R I N
Sbjct: 171 LSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK 227
Query: 571 SGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELS 630
+ PV+ + APE+ + DV+S+G+ L EL + S S
Sbjct: 228 GNARL--------PVK------WMAPESIFNCVYTFES-DVWSYGIFLWELFSLGS---S 269
Query: 631 PTTSTSIEVPDLVRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPE 690
P ++ + +K+GF +L HA E ++ + C +ADP
Sbjct: 270 PYPGMPVD-SKFYKMIKEGFR------------MLSPEHAPAE---MYDIMKTCWDADPL 313
Query: 691 VRPRMKNVSENLER 704
RP K + + +E+
Sbjct: 314 KRPTFKQIVQLIEK 327
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 61/128 (47%), Gaps = 24/128 (18%)
Query: 519 RGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGA 578
RGL Y+H +H D+KPSN+ ++ D + I DFGL+R + G++
Sbjct: 142 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR------HTDDEMTGYVA-- 190
Query: 579 LPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIE 638
T YRAPE + Q D++S G ++ ELLTG++ L P T +
Sbjct: 191 -----------TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT--LFPGTDHIDQ 237
Query: 639 VPDLVRWV 646
+ ++R V
Sbjct: 238 LKLILRLV 245
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 61/128 (47%), Gaps = 24/128 (18%)
Query: 519 RGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGA 578
RGL Y+H +H D+KPSN+ ++ D + I DFGL+R + G++
Sbjct: 155 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR------HTDDEMTGYVA-- 203
Query: 579 LPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIE 638
T YRAPE + Q D++S G ++ ELLTG++ L P T +
Sbjct: 204 -----------TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT--LFPGTDHIDQ 250
Query: 639 VPDLVRWV 646
+ ++R V
Sbjct: 251 LKLILRLV 258
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 61/128 (47%), Gaps = 24/128 (18%)
Query: 519 RGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGA 578
RGL Y+H +H D+KPSN+ ++ D + I DFGL+R + G++
Sbjct: 133 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR------HTDDEMTGYVA-- 181
Query: 579 LPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIE 638
T YRAPE + Q D++S G ++ ELLTG++ L P T +
Sbjct: 182 -----------TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT--LFPGTDHIDQ 228
Query: 639 VPDLVRWV 646
+ ++R V
Sbjct: 229 LKLILRLV 236
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 61/128 (47%), Gaps = 24/128 (18%)
Query: 519 RGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGA 578
RGL Y+H +H D+KPSN+ ++ D + I DFGL+R + G++
Sbjct: 132 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR------HTDDEMTGYVA-- 180
Query: 579 LPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIE 638
T YRAPE + Q D++S G ++ ELLTG++ L P T +
Sbjct: 181 -----------TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT--LFPGTDHIDQ 227
Query: 639 VPDLVRWV 646
+ ++R V
Sbjct: 228 LKLILRLV 235
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 61/128 (47%), Gaps = 24/128 (18%)
Query: 519 RGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGA 578
RGL Y+H +H D+KPSN+ ++ D + I DFGL+R + G++
Sbjct: 133 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR------HTDDEMTGYVA-- 181
Query: 579 LPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIE 638
T YRAPE + Q D++S G ++ ELLTG++ L P T +
Sbjct: 182 -----------TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT--LFPGTDHIDQ 228
Query: 639 VPDLVRWV 646
+ ++R V
Sbjct: 229 LKLILRLV 236
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 61/128 (47%), Gaps = 24/128 (18%)
Query: 519 RGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGA 578
RGL Y+H +H D+KPSN+ ++ D + I DFGL+R + G++
Sbjct: 142 RGLKYIHSAD---IIHRDLKPSNLAVNEDSELKILDFGLAR------HTDDEMTGYVA-- 190
Query: 579 LPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIE 638
T YRAPE + Q D++S G ++ ELLTG++ L P T +
Sbjct: 191 -----------TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT--LFPGTDHIDQ 237
Query: 639 VPDLVRWV 646
+ ++R V
Sbjct: 238 LKLILRLV 245
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 96/217 (44%), Gaps = 32/217 (14%)
Query: 419 GLGIVYKVVLGNGIPVAVRRLGEGGEQRH--RE----FVT-EVQAIAKVKHPNIVKLRAY 471
G G VVL + + + E+RH +E +VT E ++++ HP VKL +
Sbjct: 39 GEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL-YF 97
Query: 472 YWAPDEKLLIS-DFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPR 530
+ DEKL + NG L +R T TR A+ L YLH +
Sbjct: 98 TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC----TRFYTAE-IVSALEYLH---GK 149
Query: 531 KFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKT 590
+H D+KP NILL+ D I+DFG +++++ + + + F+G T
Sbjct: 150 GIIHRDLKPENILLNEDMHIQITDFGTAKVLS-PESKQARANAFVG-------------T 195
Query: 591 NNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
Y +PE + + D+++ G ++ +L+ G P
Sbjct: 196 AQYVSPEL-LTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 113/283 (39%), Gaps = 51/283 (18%)
Query: 434 VAVRRLGEGGEQ-RHREFVTEVQAIAKV-KHPNIVKLRAYYWAPDEKLL-ISDFISNGNL 490
VAV+ L EG HR ++E++ + + H N+V L P L+ I +F GNL
Sbjct: 60 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 119
Query: 491 ANALRGRNGQ-----------PSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKP 539
+ LR + + L+ + + A+G+ +L + RK +H D+
Sbjct: 120 STYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAA 176
Query: 540 SNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEAR 599
NILL I DFGL+R +I + G L +M APE
Sbjct: 177 RNILLSEKNVVKICDFGLAR--DIYKDPDXVRKGDARLPLKWM------------APETI 222
Query: 600 VPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVRWVKKGFEEENPLSDM 659
+Q DV+SFGV+L E+ + + SP I+ + R +K+G P D
Sbjct: 223 FDRVYTIQS-DVWSFGVLLWEIFSLGA---SPYPGVKID-EEFCRRLKEGTRMRAP--DY 275
Query: 660 VDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENL 702
+ Q + L C +P RP + E+L
Sbjct: 276 TTPEMYQTM-------------LDCWHGEPSQRPTFSELVEHL 305
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 61/128 (47%), Gaps = 24/128 (18%)
Query: 519 RGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGA 578
RGL Y+H +H D+KPSN+ ++ D + I DFGL+R + G++
Sbjct: 138 RGLKYIHSAD---IIHRDLKPSNLAVNEDSELKILDFGLAR------HTDDEMTGYVA-- 186
Query: 579 LPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIE 638
T YRAPE + Q D++S G ++ ELLTG++ L P T +
Sbjct: 187 -----------TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT--LFPGTDHIDQ 233
Query: 639 VPDLVRWV 646
+ ++R V
Sbjct: 234 LKLILRLV 241
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 61/128 (47%), Gaps = 24/128 (18%)
Query: 519 RGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGA 578
RGL Y+H +H D+KPSN+ ++ D + I DFGL+R + G++
Sbjct: 132 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR------HTDDEMTGYVA-- 180
Query: 579 LPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIE 638
T YRAPE + Q D++S G ++ ELLTG++ L P T +
Sbjct: 181 -----------TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT--LFPGTDHIDQ 227
Query: 639 VPDLVRWV 646
+ ++R V
Sbjct: 228 LKLILRLV 235
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 61/128 (47%), Gaps = 24/128 (18%)
Query: 519 RGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGA 578
RGL Y+H +H D+KPSN+ ++ D + I DFGL+R + G++
Sbjct: 132 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR------HTDDEMTGYVA-- 180
Query: 579 LPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIE 638
T YRAPE + Q D++S G ++ ELLTG++ L P T +
Sbjct: 181 -----------TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT--LFPGTDHIDQ 227
Query: 639 VPDLVRWV 646
+ ++R V
Sbjct: 228 LKLILRLV 235
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 61/128 (47%), Gaps = 24/128 (18%)
Query: 519 RGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGA 578
RGL Y+H +H D+KPSN+ ++ D + I DFGL+R + G++
Sbjct: 134 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR------HTDDEMTGYVA-- 182
Query: 579 LPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIE 638
T YRAPE + Q D++S G ++ ELLTG++ L P T +
Sbjct: 183 -----------TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT--LFPGTDHIDQ 229
Query: 639 VPDLVRWV 646
+ ++R V
Sbjct: 230 LKLILRLV 237
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 99/218 (45%), Gaps = 33/218 (15%)
Query: 414 VLGKSGLGIVYK-VVLGNG----IPVAVRRLGEGGEQR-HREFVTEVQAIAKVKHPNIVK 467
VLG G VYK + + G IPVA++ L E + ++E + E +A V +P++ +
Sbjct: 24 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 83
Query: 468 LRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTS--LSWSTRLRIAKGTARGLAYLH 525
L +L I + G L + +R + L+W ++ A+G+ YL
Sbjct: 84 LLGICLTSTVQL-IMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYLE 136
Query: 526 ECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPV 585
+ R+ VH D+ N+L+ I+DFG ++L+ + GG + P+
Sbjct: 137 D---RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV--------PI 185
Query: 586 QTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT 623
+ + A E+ + Q DV+S+GV + EL+T
Sbjct: 186 K------WMALESILHRIYTHQS-DVWSYGVTVWELMT 216
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 80/195 (41%), Gaps = 29/195 (14%)
Query: 448 REFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSW 507
R E+Q + ++HP +V L + ++ ++ D + G+L L Q +
Sbjct: 60 RNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHL-----QQNVHFKE 114
Query: 508 STRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNN 567
T L YL ++ +H D+KP NILLD +I+DF ++ ++
Sbjct: 115 ETVKLFICELVMALDYLQN---QRIIHRDMKPDNILLDEHGHVHITDFNIAAML------ 165
Query: 568 PSSSG-GFMGGALPYMKP--VQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTG 624
P + M G PYM P + K Y D +S GV ELL G
Sbjct: 166 PRETQITTMAGTKPYMAPEMFSSRKGAGYSFAV------------DWWSLGVTAYELLRG 213
Query: 625 KSPELSPTTSTSIEV 639
+ P ++++S E+
Sbjct: 214 RRPYHIRSSTSSKEI 228
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 57/109 (52%), Gaps = 9/109 (8%)
Query: 517 TARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMG 576
T R + LH + +H D+KPSN+L++++ + DFGL+R+I+ + + S G
Sbjct: 121 TLRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQS 177
Query: 577 GALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGK 625
G + ++ T YRAPE + + + DV+S G +L EL +
Sbjct: 178 GMVEFV------ATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 90/196 (45%), Gaps = 39/196 (19%)
Query: 452 TEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALRG-RNGQPSTSLSWSTR 510
TE++ + K+ HP I+K++ ++ A D +++ + + G L + + G + + +T + +
Sbjct: 203 TEIEILKKLNHPCIIKIKNFFDAEDYYIVL-ELMEGGELFDKVVGNKRLKEATCKLYFYQ 261
Query: 511 LRIAKGTARGLAYLHECSPRKFVHGDIKPSNILL---DNDFQPYISDFGLSRLINITGNN 567
+ +A + YLHE +H D+KP N+LL + D I+DFG S+++ T
Sbjct: 262 MLLA------VQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLM 312
Query: 568 PSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVP-----GNRPMQKWDVYSFGVVLLELL 622
+ G T Y APE V NR + D +S GV+L L
Sbjct: 313 RTLCG-----------------TPTYLAPEVLVSVGTAGYNRAV---DCWSLGVILFICL 352
Query: 623 TGKSPELSPTTSTSIE 638
+G P T S++
Sbjct: 353 SGYPPFSEHRTQVSLK 368
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 99/218 (45%), Gaps = 33/218 (15%)
Query: 414 VLGKSGLGIVYK-VVLGNG----IPVAVRRLGEGGEQR-HREFVTEVQAIAKVKHPNIVK 467
VLG G VYK + + G IPVA++ L E + ++E + E +A V +P++ +
Sbjct: 26 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 85
Query: 468 LRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTS--LSWSTRLRIAKGTARGLAYLH 525
L +L I + G L + +R + L+W ++ A+G+ YL
Sbjct: 86 LLGICLTSTVQL-IMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYLE 138
Query: 526 ECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPV 585
+ R+ VH D+ N+L+ I+DFG ++L+ + GG + P+
Sbjct: 139 D---RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV--------PI 187
Query: 586 QTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT 623
+ + A E+ + Q DV+S+GV + EL+T
Sbjct: 188 K------WMALESILHRIYTHQS-DVWSYGVTVWELMT 218
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 113/283 (39%), Gaps = 51/283 (18%)
Query: 434 VAVRRLGEGGEQ-RHREFVTEVQAIAKV-KHPNIVKLRAYYWAPDEKLL-ISDFISNGNL 490
VAV+ L EG HR ++E++ + + H N+V L P L+ I +F GNL
Sbjct: 51 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 110
Query: 491 ANALRGRNGQ-----------PSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKP 539
+ LR + + L+ + + A+G+ +L + RK +H D+
Sbjct: 111 STYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAA 167
Query: 540 SNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEAR 599
NILL I DFGL+R +I + G L +M APE
Sbjct: 168 RNILLSEKNVVKICDFGLAR--DIXKDPDXVRKGDARLPLKWM------------APETI 213
Query: 600 VPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVRWVKKGFEEENPLSDM 659
+Q DV+SFGV+L E+ + + SP I+ + R +K+G P D
Sbjct: 214 FDRVYTIQS-DVWSFGVLLWEIFSLGA---SPYPGVKID-EEFCRRLKEGTRMRAP--DY 266
Query: 660 VDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENL 702
+ Q + L C +P RP + E+L
Sbjct: 267 TTPEMYQTM-------------LDCWHGEPSQRPTFSELVEHL 296
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 92/219 (42%), Gaps = 34/219 (15%)
Query: 415 LGKSGLGIVYKV---VLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAY 471
+G+ G+VYK + G + + RL E + E+ + ++ HPNIVKL
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 472 YWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRK 531
++ L+ +F+S + + + T + +GLA+ C +
Sbjct: 74 IHTENKLYLVFEFLS----MDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF---CHSHR 126
Query: 532 FVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEK-- 589
+H D+KP N+L++ + ++DFGL+R + PV+T
Sbjct: 127 VLHRDLKPENLLINTEGAIKLADFGLARAFGV--------------------PVRTYXHE 166
Query: 590 --TNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKS 626
T YRAPE + D++S G + E++T ++
Sbjct: 167 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 205
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 100/218 (45%), Gaps = 33/218 (15%)
Query: 414 VLGKSGLGIVYK-VVLGNG----IPVAVRRLGEGGEQR-HREFVTEVQAIAKVKHPNIVK 467
VLG G VYK + + G IPVA++ L E + ++E + E +A V +P++ +
Sbjct: 24 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 83
Query: 468 LRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTS--LSWSTRLRIAKGTARGLAYLH 525
L +L++ + G L + +R + L+W ++ A+G+ YL
Sbjct: 84 LLGICLTSTVQLIMQ-LMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYLE 136
Query: 526 ECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPV 585
+ R+ VH D+ N+L+ I+DFG ++L+ + GG + P+
Sbjct: 137 D---RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV--------PI 185
Query: 586 QTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT 623
+ + A E+ + Q DV+S+GV + EL+T
Sbjct: 186 K------WMALESILHRIYTHQS-DVWSYGVTVWELMT 216
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 83/198 (41%), Gaps = 31/198 (15%)
Query: 434 VAVRRLGEGGEQ--RHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLA 491
VAV++L + R E++ + +KH N++ L + I DF S L
Sbjct: 56 VAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDVFTPATS---IEDF-SEVYLV 111
Query: 492 NALRG---RNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDF 548
L G N +LS + RGL Y+H +H D+KPSN+ ++ D
Sbjct: 112 TTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHSAG---IIHRDLKPSNVAVNEDS 168
Query: 549 QPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQK 608
+ I DFGL+R + G++ T YRAPE + Q
Sbjct: 169 ELRILDFGLARQAD------EEMTGYVA-------------TRWYRAPEIMLNWMHYNQT 209
Query: 609 WDVYSFGVVLLELLTGKS 626
D++S G ++ ELL GK+
Sbjct: 210 VDIWSVGCIMAELLQGKA 227
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 84/219 (38%), Gaps = 30/219 (13%)
Query: 452 TEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRL 511
TE+ + +P++V ++ D ++ + +L + R + R
Sbjct: 91 TEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMR- 149
Query: 512 RIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSS 571
T +G+ YLH + +H D+K N+ L++D I DFGL+ I G
Sbjct: 150 ----QTIQGVQYLHN---NRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDL 202
Query: 572 GGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSP 631
G T NY APE + D++S G +L LL GK P
Sbjct: 203 CG----------------TPNYIAPEVLCKKGHSFE-VDIWSLGCILYTLLVGKPP---- 241
Query: 632 TTSTSIEVPDLVRWVKKGFEEENPLSDMVDAMLLQEVHA 670
TS +R K + ++ + A++ + +HA
Sbjct: 242 -FETSCLKETYIRIKKNEYSVPRHINPVASALIRRMLHA 279
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 92/219 (42%), Gaps = 34/219 (15%)
Query: 415 LGKSGLGIVYKV---VLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAY 471
+G+ G+VYK + G + + RL E + E+ + ++ HPNIVKL
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 472 YWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRK 531
++ L+ +F+S + + + T + +GLA+ C +
Sbjct: 72 IHTENKLYLVFEFLS----MDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF---CHSHR 124
Query: 532 FVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEK-- 589
+H D+KP N+L++ + ++DFGL+R + PV+T
Sbjct: 125 VLHRDLKPENLLINTEGAIKLADFGLARAFGV--------------------PVRTYXHE 164
Query: 590 --TNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKS 626
T YRAPE + D++S G + E++T ++
Sbjct: 165 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 203
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 90/196 (45%), Gaps = 39/196 (19%)
Query: 452 TEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALRG-RNGQPSTSLSWSTR 510
TE++ + K+ HP I+K++ ++ A D +++ + + G L + + G + + +T + +
Sbjct: 189 TEIEILKKLNHPCIIKIKNFFDAEDYYIVL-ELMEGGELFDKVVGNKRLKEATCKLYFYQ 247
Query: 511 LRIAKGTARGLAYLHECSPRKFVHGDIKPSNILL---DNDFQPYISDFGLSRLINITGNN 567
+ +A + YLHE +H D+KP N+LL + D I+DFG S+++ T
Sbjct: 248 MLLA------VQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLM 298
Query: 568 PSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVP-----GNRPMQKWDVYSFGVVLLELL 622
+ G T Y APE V NR + D +S GV+L L
Sbjct: 299 RTLCG-----------------TPTYLAPEVLVSVGTAGYNRAV---DCWSLGVILFICL 338
Query: 623 TGKSPELSPTTSTSIE 638
+G P T S++
Sbjct: 339 SGYPPFSEHRTQVSLK 354
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 96/217 (44%), Gaps = 32/217 (14%)
Query: 419 GLGIVYKVVLGNGIPVAVRRLGEGGEQRH--RE----FVT-EVQAIAKVKHPNIVKLRAY 471
G G VVL + + + E+RH +E +VT E ++++ HP VKL +
Sbjct: 38 GEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL-YF 96
Query: 472 YWAPDEKLLIS-DFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPR 530
+ DEKL + NG L +R T TR A+ L YLH +
Sbjct: 97 TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC----TRFYTAE-IVSALEYLH---GK 148
Query: 531 KFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKT 590
+H D+KP NILL+ D I+DFG +++++ + + + F+G T
Sbjct: 149 GIIHRDLKPENILLNEDMHIQITDFGTAKVLS-PESKQARANSFVG-------------T 194
Query: 591 NNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
Y +PE + + D+++ G ++ +L+ G P
Sbjct: 195 AQYVSPEL-LTEKSACKSSDLWALGCIIYQLVAGLPP 230
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 57/117 (48%), Gaps = 18/117 (15%)
Query: 512 RIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLS-RLINITGNNPSS 570
+I T + L +L E K +H DIKPSNILLD + DFG+S +L++ +
Sbjct: 129 KITLATVKALNHLKE--NLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDA 186
Query: 571 SGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
G PYM P + + + + + + R DV+S G+ L EL TG+ P
Sbjct: 187 ------GCRPYMAPERIDPSASRQGYDVRS---------DVWSLGITLYELATGRFP 228
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 84/219 (38%), Gaps = 30/219 (13%)
Query: 452 TEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRL 511
TE+ + +P++V ++ D ++ + +L + R + R
Sbjct: 91 TEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMR- 149
Query: 512 RIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSS 571
T +G+ YLH + +H D+K N+ L++D I DFGL+ I G
Sbjct: 150 ----QTIQGVQYLHN---NRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXL 202
Query: 572 GGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSP 631
G T NY APE + D++S G +L LL GK P
Sbjct: 203 CG----------------TPNYIAPEVLCKKGHSFE-VDIWSLGCILYTLLVGKPP---- 241
Query: 632 TTSTSIEVPDLVRWVKKGFEEENPLSDMVDAMLLQEVHA 670
TS +R K + ++ + A++ + +HA
Sbjct: 242 -FETSCLKETYIRIKKNEYSVPRHINPVASALIRRMLHA 279
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 95/217 (43%), Gaps = 32/217 (14%)
Query: 419 GLGIVYKVVLGNGIPVAVRRLGEGGEQRH--RE----FVT-EVQAIAKVKHPNIVKLRAY 471
G G VVL + + + E+RH +E +VT E ++++ HP VKL +
Sbjct: 42 GEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL-YF 100
Query: 472 YWAPDEKLLIS-DFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPR 530
+ DEKL + NG L +R T TR A+ L YLH +
Sbjct: 101 TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC----TRFYTAE-IVSALEYLH---GK 152
Query: 531 KFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKT 590
+H D+KP NILL+ D I+DFG +++++ + + F+G T
Sbjct: 153 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ-ARANSFVG-------------T 198
Query: 591 NNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
Y +PE + + D+++ G ++ +L+ G P
Sbjct: 199 AQYVSPEL-LTEKSACKSSDLWALGCIIYQLVAGLPP 234
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 91/218 (41%), Gaps = 32/218 (14%)
Query: 415 LGKSGLGIVYKVVLG-NGIPVAVRRLGE--GGEQRHREFVTEVQAIAKVKHPNIVKLRAY 471
+G G V V G G VA+++L E + E++ + ++H N++ L
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDV 92
Query: 472 YWAPDEKLLISDFISNGNLANALRGRNG---QPSTSLSWSTRLRIAKGTARGLAYLHECS 528
+ PDE L D ++ L G + L + +GL Y+H
Sbjct: 93 F-TPDETL---DDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAG 148
Query: 529 PRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTE 588
+H D+KP N+ ++ D + I DFGL+R + M G +
Sbjct: 149 ---IIHRDLKPGNLAVNEDCELKILDFGLAR----------QADSEMXGXVV-------- 187
Query: 589 KTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKS 626
T YRAPE + R Q D++S G ++ E++TGK+
Sbjct: 188 -TRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKT 224
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 99/228 (43%), Gaps = 33/228 (14%)
Query: 409 RASAYVLGKS-GLGIVYKVVLGNGIPVAVRRLGEGGEQRH--RE----FVT-EVQAIAKV 460
R + GK G G VVL + + + E+RH +E +VT E ++++
Sbjct: 7 RPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL 66
Query: 461 KHPNIVKLRAYYWAPDEKLLIS-DFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTAR 519
HP VKL + + DEKL + NG L +R T TR A+
Sbjct: 67 DHPFFVKL-YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC----TRFYTAE-IVS 120
Query: 520 GLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGAL 579
L YLH + +H D+KP NILL+ D I+DFG +++++ + + F+G
Sbjct: 121 ALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ-ARANXFVG--- 173
Query: 580 PYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
T Y +PE + + D+++ G ++ +L+ G P
Sbjct: 174 ----------TAQYVSPEL-LTEKSACKSSDLWALGCIIYQLVAGLPP 210
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 94/219 (42%), Gaps = 34/219 (15%)
Query: 415 LGKSGLGIVYKV---VLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAY 471
+G+ G+VYK + G + + RL E + E+ + ++ HPNIVKL
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 472 YWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRK 531
++ L+ +F+S +L + + + T + +GLA+ C +
Sbjct: 74 IHTENKLYLVFEFLSM-DLKDFM---DASALTGIPLPLIKSYLFQLLQGLAF---CHSHR 126
Query: 532 FVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEK-- 589
+H D+KP N+L++ + ++DFGL+R + PV+T
Sbjct: 127 VLHRDLKPQNLLINTEGAIKLADFGLARAFGV--------------------PVRTYXHE 166
Query: 590 --TNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKS 626
T YRAPE + D++S G + E++T ++
Sbjct: 167 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 205
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 100/228 (43%), Gaps = 33/228 (14%)
Query: 409 RASAYVLGKS-GLGIVYKVVLGNGIPVAVRRLGEGGEQRH--RE----FVT-EVQAIAKV 460
R + GK G G VVL + + + E+RH +E +VT E ++++
Sbjct: 6 RPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL 65
Query: 461 KHPNIVKLRAYYWAPDEKLLIS-DFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTAR 519
HP VKL + + DEKL + NG L +R T TR A+
Sbjct: 66 DHPFFVKL-YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC----TRFYTAE-IVS 119
Query: 520 GLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGAL 579
L YLH + +H D+KP NILL+ D I+DFG +++++ + + + F+G
Sbjct: 120 ALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLS-PESKQARANXFVG--- 172
Query: 580 PYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
T Y +PE + + D+++ G ++ +L+ G P
Sbjct: 173 ----------TAQYVSPEL-LTEKSACKSSDLWALGCIIYQLVAGLPP 209
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 95/217 (43%), Gaps = 32/217 (14%)
Query: 419 GLGIVYKVVLGNGIPVAVRRLGEGGEQRH--RE----FVT-EVQAIAKVKHPNIVKLRAY 471
G G VVL + + + E+RH +E +VT E ++++ HP VKL +
Sbjct: 46 GEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL-YF 104
Query: 472 YWAPDEKLLIS-DFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPR 530
+ DEKL + NG L +R T TR A+ L YLH +
Sbjct: 105 CFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC----TRFYTAE-IVSALEYLH---GK 156
Query: 531 KFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKT 590
+H D+KP NILL+ D I+DFG +++++ + + F+G T
Sbjct: 157 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ-ARANXFVG-------------T 202
Query: 591 NNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
Y +PE + + D+++ G ++ +L+ G P
Sbjct: 203 AQYVSPEL-LTEKSACKSSDLWALGCIIYQLVAGLPP 238
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 94/219 (42%), Gaps = 34/219 (15%)
Query: 415 LGKSGLGIVYKV---VLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAY 471
+G+ G+VYK + G + + RL E + E+ + ++ HPNIVKL
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 72
Query: 472 YWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRK 531
++ L+ +F+S +L + + + T + +GLA+ C +
Sbjct: 73 IHTENKLYLVFEFLSM-DLKDFM---DASALTGIPLPLIKSYLFQLLQGLAF---CHSHR 125
Query: 532 FVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEK-- 589
+H D+KP N+L++ + ++DFGL+R + PV+T
Sbjct: 126 VLHRDLKPQNLLINTEGAIKLADFGLARAFGV--------------------PVRTYXHE 165
Query: 590 --TNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKS 626
T YRAPE + D++S G + E++T ++
Sbjct: 166 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 204
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 61/128 (47%), Gaps = 24/128 (18%)
Query: 519 RGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGA 578
RGL Y+H +H D+KPSN+ ++ D + I DFGL+R + M G
Sbjct: 136 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----------HTDDEMTGX 182
Query: 579 LPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIE 638
+ T YRAPE + Q D++S G ++ ELLTG++ L P T +
Sbjct: 183 VA---------TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT--LFPGTDHIDQ 231
Query: 639 VPDLVRWV 646
+ ++R V
Sbjct: 232 LKLILRLV 239
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 96/217 (44%), Gaps = 32/217 (14%)
Query: 419 GLGIVYKVVLGNGIPVAVRRLGEGGEQRH--RE----FVT-EVQAIAKVKHPNIVKLRAY 471
G G VVL + + + E+RH +E +VT E ++++ HP VKL +
Sbjct: 39 GEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL-YF 97
Query: 472 YWAPDEKLLIS-DFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPR 530
+ DEKL + NG L +R T TR A+ L YLH +
Sbjct: 98 TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC----TRFYTAE-IVSALEYLH---GK 149
Query: 531 KFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKT 590
+H D+KP NILL+ D I+DFG +++++ + + + F+G T
Sbjct: 150 GIIHRDLKPENILLNEDMHIQITDFGTAKVLS-PESKQARANXFVG-------------T 195
Query: 591 NNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
Y +PE + + D+++ G ++ +L+ G P
Sbjct: 196 AQYVSPEL-LTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 100/228 (43%), Gaps = 33/228 (14%)
Query: 409 RASAYVLGKS-GLGIVYKVVLGNGIPVAVRRLGEGGEQRH--RE----FVT-EVQAIAKV 460
R + GK G G VVL + + + E+RH +E +VT E ++++
Sbjct: 5 RPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL 64
Query: 461 KHPNIVKLRAYYWAPDEKLLIS-DFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTAR 519
HP VKL + + DEKL + NG L +R T TR A+
Sbjct: 65 DHPFFVKL-YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC----TRFYTAE-IVS 118
Query: 520 GLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGAL 579
L YLH + +H D+KP NILL+ D I+DFG +++++ + + + F+G
Sbjct: 119 ALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLS-PESKQARANXFVG--- 171
Query: 580 PYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
T Y +PE + + D+++ G ++ +L+ G P
Sbjct: 172 ----------TAQYVSPEL-LTEKSACKSSDLWALGCIIYQLVAGLPP 208
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 96/217 (44%), Gaps = 32/217 (14%)
Query: 419 GLGIVYKVVLGNGIPVAVRRLGEGGEQRH--RE----FVT-EVQAIAKVKHPNIVKLRAY 471
G G VVL + + + E+RH +E +VT E ++++ HP VKL +
Sbjct: 23 GEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL-YF 81
Query: 472 YWAPDEKLLIS-DFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPR 530
+ DEKL + NG L +R T TR A+ L YLH +
Sbjct: 82 TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC----TRFYTAE-IVSALEYLH---GK 133
Query: 531 KFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKT 590
+H D+KP NILL+ D I+DFG +++++ + + + F+G T
Sbjct: 134 GIIHRDLKPENILLNEDMHIQITDFGTAKVLS-PESKQARANXFVG-------------T 179
Query: 591 NNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
Y +PE + + D+++ G ++ +L+ G P
Sbjct: 180 AQYVSPEL-LTEKSACKSSDLWALGCIIYQLVAGLPP 215
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 96/217 (44%), Gaps = 32/217 (14%)
Query: 419 GLGIVYKVVLGNGIPVAVRRLGEGGEQRH--RE----FVT-EVQAIAKVKHPNIVKLRAY 471
G G VVL + + + E+RH +E +VT E ++++ HP VKL +
Sbjct: 39 GEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL-YF 97
Query: 472 YWAPDEKLLIS-DFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPR 530
+ DEKL + NG L +R T TR A+ L YLH +
Sbjct: 98 TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC----TRFYTAE-IVSALEYLH---GK 149
Query: 531 KFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKT 590
+H D+KP NILL+ D I+DFG +++++ + + + F+G T
Sbjct: 150 GIIHRDLKPENILLNEDMHIQITDFGTAKVLS-PESKQARANXFVG-------------T 195
Query: 591 NNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
Y +PE + + D+++ G ++ +L+ G P
Sbjct: 196 AQYVSPEL-LTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 96/217 (44%), Gaps = 32/217 (14%)
Query: 419 GLGIVYKVVLGNGIPVAVRRLGEGGEQRH--RE----FVT-EVQAIAKVKHPNIVKLRAY 471
G G VVL + + + E+RH +E +VT E ++++ HP VKL +
Sbjct: 41 GEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL-YF 99
Query: 472 YWAPDEKLLIS-DFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPR 530
+ DEKL + NG L +R T TR A+ L YLH +
Sbjct: 100 TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC----TRFYTAE-IVSALEYLH---GK 151
Query: 531 KFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKT 590
+H D+KP NILL+ D I+DFG +++++ + + + F+G T
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDFGTAKVLS-PESKQARANXFVG-------------T 197
Query: 591 NNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
Y +PE + + D+++ G ++ +L+ G P
Sbjct: 198 AQYVSPEL-LTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 96/217 (44%), Gaps = 32/217 (14%)
Query: 419 GLGIVYKVVLGNGIPVAVRRLGEGGEQRH--RE----FVT-EVQAIAKVKHPNIVKLRAY 471
G G VVL + + + E+RH +E +VT E ++++ HP VKL +
Sbjct: 38 GEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL-YF 96
Query: 472 YWAPDEKLLIS-DFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPR 530
+ DEKL + NG L +R T TR A+ L YLH +
Sbjct: 97 TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC----TRFYTAE-IVSALEYLH---GK 148
Query: 531 KFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKT 590
+H D+KP NILL+ D I+DFG +++++ + + + F+G T
Sbjct: 149 GIIHRDLKPENILLNEDMHIQITDFGTAKVLS-PESKQARANXFVG-------------T 194
Query: 591 NNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
Y +PE + + D+++ G ++ +L+ G P
Sbjct: 195 AQYVSPEL-LTEKSACKSSDLWALGCIIYQLVAGLPP 230
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 99/228 (43%), Gaps = 33/228 (14%)
Query: 409 RASAYVLGKS-GLGIVYKVVLGNGIPVAVRRLGEGGEQRH--RE----FVT-EVQAIAKV 460
R + GK G G VVL + + + E+RH +E +VT E ++++
Sbjct: 8 RPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL 67
Query: 461 KHPNIVKLRAYYWAPDEKLLIS-DFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTAR 519
HP VKL + + DEKL + NG L +R T TR A+
Sbjct: 68 DHPFFVKL-YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC----TRFYTAE-IVS 121
Query: 520 GLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGAL 579
L YLH + +H D+KP NILL+ D I+DFG +++++ + + F+G
Sbjct: 122 ALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ-ARANXFVG--- 174
Query: 580 PYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
T Y +PE + + D+++ G ++ +L+ G P
Sbjct: 175 ----------TAQYVSPEL-LTEKSACKSSDLWALGCIIYQLVAGLPP 211
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 100/218 (45%), Gaps = 34/218 (15%)
Query: 419 GLGIVYKVVLGNGIPVAVRRLGEGGEQRH--RE----FVT-EVQAIAKVKHPNIVKLRAY 471
G G VVL + + + E+RH +E +VT E ++++ HP VKL +
Sbjct: 41 GEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL-YF 99
Query: 472 YWAPDEKLLIS-DFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPR 530
+ DEKL + NG L +R T TR A+ L YLH +
Sbjct: 100 TFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETC----TRFYTAE-IVSALEYLH---GK 151
Query: 531 KFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKP-VQTEK 589
+H D+KP NILL+ D I+DFG +++++ + + + F+G A Y+ P + TEK
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDFGTAKVLS-PESKQARANSFVGTA-QYVSPELLTEK 209
Query: 590 TNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
+ + + D+++ G ++ +L+ G P
Sbjct: 210 SAS--------------KSSDLWALGCIIYQLVAGLPP 233
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 61/128 (47%), Gaps = 24/128 (18%)
Query: 519 RGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGA 578
RGL Y+H +H D+KPSN+ ++ D + I DFGL+R + M G
Sbjct: 156 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----------HTDDEMXGX 202
Query: 579 LPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIE 638
+ T YRAPE + Q D++S G ++ ELLTG++ L P T +
Sbjct: 203 V---------ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT--LFPGTDHIDQ 251
Query: 639 VPDLVRWV 646
+ ++R V
Sbjct: 252 LKLILRLV 259
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 96/217 (44%), Gaps = 32/217 (14%)
Query: 419 GLGIVYKVVLGNGIPVAVRRLGEGGEQRH--RE----FVT-EVQAIAKVKHPNIVKLRAY 471
G G VVL + + + E+RH +E +VT E ++++ HP VKL +
Sbjct: 41 GEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL-YF 99
Query: 472 YWAPDEKLLIS-DFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPR 530
+ DEKL + NG L +R T TR A+ L YLH +
Sbjct: 100 TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC----TRFYTAE-IVSALEYLH---GK 151
Query: 531 KFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKT 590
+H D+KP NILL+ D I+DFG +++++ + + + F+G T
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDFGTAKVLS-PESKQARANXFVG-------------T 197
Query: 591 NNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
Y +PE + + D+++ G ++ +L+ G P
Sbjct: 198 AQYVSPEL-LTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 82/180 (45%), Gaps = 26/180 (14%)
Query: 450 FVT-EVQAIAKVKHPNIVKLRAYYWAPDEKLLIS-DFISNGNLANALRGRNGQPSTSLSW 507
+VT E ++++ HP VKL + + DEKL + NG L +R T
Sbjct: 78 YVTRERDVMSRLDHPFFVKL-YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC--- 133
Query: 508 STRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNN 567
TR A+ L YLH + +H D+KP NILL+ D I+DFG +++++ +
Sbjct: 134 -TRFYTAE-IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLS-PESK 187
Query: 568 PSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
+ + F+G T Y +PE + + D+++ G ++ +L+ G P
Sbjct: 188 QARANXFVG-------------TAQYVSPEL-LTEKSAXKSSDLWALGCIIYQLVAGLPP 233
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 95/217 (43%), Gaps = 32/217 (14%)
Query: 419 GLGIVYKVVLGNGIPVAVRRLGEGGEQRH--RE----FVT-EVQAIAKVKHPNIVKLRAY 471
G G VVL + + + E+RH +E +VT E ++++ HP VKL +
Sbjct: 42 GEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL-YF 100
Query: 472 YWAPDEKLLIS-DFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPR 530
+ DEKL + NG L +R T TR A+ L YLH +
Sbjct: 101 TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC----TRFYTAE-IVSALEYLH---GK 152
Query: 531 KFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKT 590
+H D+KP NILL+ D I+DFG +++++ + + F+G T
Sbjct: 153 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ-ARANXFVG-------------T 198
Query: 591 NNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
Y +PE + + D+++ G ++ +L+ G P
Sbjct: 199 AQYVSPEL-LTEKSACKSSDLWALGCIIYQLVAGLPP 234
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 61/128 (47%), Gaps = 24/128 (18%)
Query: 519 RGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGA 578
RGL Y+H +H D+KPSN+ ++ D + I D+GL+R + G++
Sbjct: 136 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDYGLAR------HTDDEMTGYVA-- 184
Query: 579 LPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIE 638
T YRAPE + Q D++S G ++ ELLTG++ L P T +
Sbjct: 185 -----------TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT--LFPGTDHIDQ 231
Query: 639 VPDLVRWV 646
+ ++R V
Sbjct: 232 LKLILRLV 239
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 82/180 (45%), Gaps = 26/180 (14%)
Query: 450 FVT-EVQAIAKVKHPNIVKLRAYYWAPDEKLLIS-DFISNGNLANALRGRNGQPSTSLSW 507
+VT E ++++ HP VKL + + DEKL + NG L +R T
Sbjct: 76 YVTRERDVMSRLDHPFFVKL-YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC--- 131
Query: 508 STRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNN 567
TR A+ L YLH + +H D+KP NILL+ D I+DFG +++++ +
Sbjct: 132 -TRFYTAE-IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLS-PESK 185
Query: 568 PSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
+ + F+G T Y +PE + + D+++ G ++ +L+ G P
Sbjct: 186 QARANXFVG-------------TAQYVSPEL-LTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 103/228 (45%), Gaps = 39/228 (17%)
Query: 415 LGKSGLGIVYKVVLGN-GIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYW 473
LG G G+V+ V + VA++++ Q + + E++ I ++ H NIVK+
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILG 78
Query: 474 APDEKL--------------LISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTAR 519
+L ++ +++ +LAN L + L RL + + R
Sbjct: 79 PSGSQLTDDVGSLTELNSVYIVQEYMET-DLANVL-----EQGPLLEEHARLFMYQ-LLR 131
Query: 520 GLAYLHECSPRKFVHGDIKPSNILLDN-DFQPYISDFGLSRLINITGNNPSSSGGFMGGA 578
GL Y+H + +H D+KP+N+ ++ D I DFGL+R+++ + S G G
Sbjct: 132 GLKYIHSAN---VLHRDLKPANLFINTEDLVLKIGDFGLARIMD---PHYSHKGHLSEGL 185
Query: 579 LPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKS 626
+ T YR+P + N + D+++ G + E+LTGK+
Sbjct: 186 V----------TKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKT 223
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 95/217 (43%), Gaps = 32/217 (14%)
Query: 419 GLGIVYKVVLGNGIPVAVRRLGEGGEQRH--RE----FVT-EVQAIAKVKHPNIVKLRAY 471
G G VVL + + + E+RH +E +VT E ++++ HP VKL +
Sbjct: 41 GEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL-YF 99
Query: 472 YWAPDEKLLIS-DFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPR 530
+ DEKL + NG L +R T TR A+ L YLH +
Sbjct: 100 TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC----TRFYTAE-IVSALEYLH---GK 151
Query: 531 KFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKT 590
+H D+KP NILL+ D I+DFG +++++ + + F+G T
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ-ARANXFVG-------------T 197
Query: 591 NNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
Y +PE + + D+++ G ++ +L+ G P
Sbjct: 198 AQYVSPEL-LTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 82/180 (45%), Gaps = 26/180 (14%)
Query: 450 FVT-EVQAIAKVKHPNIVKLRAYYWAPDEKLLIS-DFISNGNLANALRGRNGQPSTSLSW 507
+VT E ++++ HP VKL + + DEKL + NG L +R T
Sbjct: 78 YVTRERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC--- 133
Query: 508 STRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNN 567
TR A+ L YLH + +H D+KP NILL+ D I+DFG +++++ +
Sbjct: 134 -TRFYTAE-IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLS-PESK 187
Query: 568 PSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
+ + F+G T Y +PE + + D+++ G ++ +L+ G P
Sbjct: 188 QARANXFVG-------------TAQYVSPEL-LTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 81/180 (45%), Gaps = 26/180 (14%)
Query: 450 FVT-EVQAIAKVKHPNIVKLRAYYWAPDEKLLIS-DFISNGNLANALRGRNGQPSTSLSW 507
+VT E ++++ HP VKL + + DEKL + NG L +R T
Sbjct: 81 YVTRERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC--- 136
Query: 508 STRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNN 567
TR A+ L YLH + +H D+KP NILL+ D I+DFG +++++
Sbjct: 137 -TRFYTAE-IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 191
Query: 568 PSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
+ + F+G T Y +PE + + D+++ G ++ +L+ G P
Sbjct: 192 -ARANXFVG-------------TAQYVSPEL-LTEKSACKSSDLWALGCIIYQLVAGLPP 236
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 104/262 (39%), Gaps = 52/262 (19%)
Query: 449 EFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWS 508
+F+ E + + + HPNIV+L ++ + + G+ LR + L
Sbjct: 158 KFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGAR----LRVK 213
Query: 509 TRLRIAKGTARGLAYLH-ECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNN 567
T L++ A G+ YL +C +H D+ N L+ ISDFG+SR
Sbjct: 214 TLLQMVGDAAAGMEYLESKCC----IHRDLAARNCLVTEKNVLKISDFGMSR--EEADGV 267
Query: 568 PSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKS 626
++SGG PV+ + APEA G R + DV+SFG++L E + G S
Sbjct: 268 XAASGGLR------QVPVK------WTAPEALNYG-RYSSESDVWSFGILLWETFSLGAS 314
Query: 627 PELSPTTSTSIEVPDLVRWVKKGFEEEN---PLSDMVDAMLLQEVHAKKEVIAVFHLALA 683
P P+L + F E+ P ++ AVF L
Sbjct: 315 P-----------YPNLSNQQTREFVEKGGRLPCPELCPD-------------AVFRLMEQ 350
Query: 684 CTEADPEVRPRMKNVSENLERI 705
C +P RP + + L+ I
Sbjct: 351 CWAYEPGQRPSFSTIYQELQSI 372
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 91/219 (41%), Gaps = 34/219 (15%)
Query: 415 LGKSGLGIVYKV---VLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAY 471
+G+ G+VYK + G + + RL E + E+ + ++ HPNIVKL
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 472 YWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRK 531
++ L+ +F+ + + + T + +GLA+ C +
Sbjct: 71 IHTENKLYLVFEFLHQ----DLKKFMDASALTGIPLPLIKSYLFQLLQGLAF---CHSHR 123
Query: 532 FVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEK-- 589
+H D+KP N+L++ + ++DFGL+R + PV+T
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGV--------------------PVRTYXHE 163
Query: 590 --TNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKS 626
T YRAPE + D++S G + E++T ++
Sbjct: 164 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 202
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 88/215 (40%), Gaps = 26/215 (12%)
Query: 415 LGKSGLGIVYKV---VLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAY 471
+G+ G+VYK + G + + RL E + E+ + ++ HPNIVKL
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 472 YWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRK 531
++ L+ +F+ + + + T + +GLA+ C +
Sbjct: 72 IHTENKLYLVFEFLHQ----DLKKFMDASALTGIPLPLIKSYLFQLLQGLAF---CHSHR 124
Query: 532 FVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTN 591
+H D+KP N+L++ + ++DFGL+R + P T
Sbjct: 125 VLHRDLKPQNLLINTEGAIKLADFGLARAFGV----------------PVRTYTHEVVTL 168
Query: 592 NYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKS 626
YRAPE + D++S G + E++T ++
Sbjct: 169 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 203
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 91/219 (41%), Gaps = 34/219 (15%)
Query: 415 LGKSGLGIVYKV---VLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAY 471
+G+ G+VYK + G + + RL E + E+ + ++ HPNIVKL
Sbjct: 15 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 74
Query: 472 YWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRK 531
++ L+ +F+ + + + T + +GLA+ C +
Sbjct: 75 IHTENKLYLVFEFLHQ----DLKKFMDASALTGIPLPLIKSYLFQLLQGLAF---CHSHR 127
Query: 532 FVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEK-- 589
+H D+KP N+L++ + ++DFGL+R + PV+T
Sbjct: 128 VLHRDLKPQNLLINTEGAIKLADFGLARAFGV--------------------PVRTYXHE 167
Query: 590 --TNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKS 626
T YRAPE + D++S G + E++T ++
Sbjct: 168 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 206
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 88/215 (40%), Gaps = 26/215 (12%)
Query: 415 LGKSGLGIVYKV---VLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAY 471
+G+ G+VYK + G + + RL E + E+ + ++ HPNIVKL
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 472 YWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRK 531
++ L+ +F+ + + + T + +GLA+ C +
Sbjct: 71 IHTENKLYLVFEFLHQ----DLKKFMDASALTGIPLPLIKSYLFQLLQGLAF---CHSHR 123
Query: 532 FVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTN 591
+H D+KP N+L++ + ++DFGL+R + P T
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGV----------------PVRTYTHEVVTL 167
Query: 592 NYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKS 626
YRAPE + D++S G + E++T ++
Sbjct: 168 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 202
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 91/219 (41%), Gaps = 34/219 (15%)
Query: 415 LGKSGLGIVYKV---VLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAY 471
+G+ G+VYK + G + + RL E + E+ + ++ HPNIVKL
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 472 YWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRK 531
++ L+ +F+ + + + T + +GLA+ C +
Sbjct: 74 IHTENKLYLVFEFLHQ----DLKKFMDASALTGIPLPLIKSYLFQLLQGLAF---CHSHR 126
Query: 532 FVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEK-- 589
+H D+KP N+L++ + ++DFGL+R + PV+T
Sbjct: 127 VLHRDLKPQNLLINTEGAIKLADFGLARAFGV--------------------PVRTYXHE 166
Query: 590 --TNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKS 626
T YRAPE + D++S G + E++T ++
Sbjct: 167 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 205
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 88/215 (40%), Gaps = 26/215 (12%)
Query: 415 LGKSGLGIVYKV---VLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAY 471
+G+ G+VYK + G + + RL E + E+ + ++ HPNIVKL
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 472 YWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRK 531
++ L+ +F+ + + + T + +GLA+ C +
Sbjct: 70 IHTENKLYLVFEFLHQ----DLKKFMDASALTGIPLPLIKSYLFQLLQGLAF---CHSHR 122
Query: 532 FVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTN 591
+H D+KP N+L++ + ++DFGL+R + P T
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLARAFGV----------------PVRTYTHEVVTL 166
Query: 592 NYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKS 626
YRAPE + D++S G + E++T ++
Sbjct: 167 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 201
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 81/197 (41%), Gaps = 29/197 (14%)
Query: 453 EVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLR 512
E+ + K+ HPN+VKL P+E L F L N LS
Sbjct: 86 EIAILKKLDHPNVVKLVEVLDDPNEDHLYMVF----ELVNQGPVMEVPTLKPLSEDQARF 141
Query: 513 IAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSG 572
+ +G+ YLH +K +H DIKPSN+L+ D I+DFG+S G++ S
Sbjct: 142 YFQDLIKGIEYLHY---QKIIHRDIKPSNLLVGEDGHIKIADFGVSN--EFKGSDALLSN 196
Query: 573 GFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPEL--- 629
G +M P +T + +A DV++ GV L + G+ P +
Sbjct: 197 TV--GTPAFMAPESLSETRKIFSGKA----------LDVWAMGVTLYCFVFGQCPFMDER 244
Query: 630 -----SPTTSTSIEVPD 641
S S ++E PD
Sbjct: 245 IMCLHSKIKSQALEFPD 261
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 84/193 (43%), Gaps = 25/193 (12%)
Query: 431 GIPVAVRRLGEGGEQRHRE-FVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGN 489
+ VA++ RE F+ E + + HP+IVKL + +I + + G
Sbjct: 38 AMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGE 96
Query: 490 LANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQ 549
L + L+ R SL ++ + A + LAYL ++FVH DI N+L+ ++
Sbjct: 97 LRSFLQVRK----FSLDLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDC 149
Query: 550 PYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKW 609
+ DFGLSR + + +S G + +M P E N R A
Sbjct: 150 VKLGDFGLSRYMEDSTXXKASKGKL---PIKWMAP---ESINFRRFTSAS---------- 193
Query: 610 DVYSFGVVLLELL 622
DV+ FGV + E+L
Sbjct: 194 DVWMFGVCMWEIL 206
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 91/219 (41%), Gaps = 34/219 (15%)
Query: 415 LGKSGLGIVYKV---VLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAY 471
+G+ G+VYK + G + + RL E + E+ + ++ HPNIVKL
Sbjct: 18 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 77
Query: 472 YWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRK 531
++ L+ +F+ + + + T + +GLA+ C +
Sbjct: 78 IHTENKLYLVFEFLHQ----DLKKFMDASALTGIPLPLIKSYLFQLLQGLAF---CHSHR 130
Query: 532 FVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEK-- 589
+H D+KP N+L++ + ++DFGL+R + PV+T
Sbjct: 131 VLHRDLKPQNLLINTEGAIKLADFGLARAFGV--------------------PVRTYTHE 170
Query: 590 --TNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKS 626
T YRAPE + D++S G + E++T ++
Sbjct: 171 VVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRA 209
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 88/215 (40%), Gaps = 26/215 (12%)
Query: 415 LGKSGLGIVYKV---VLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAY 471
+G+ G+VYK + G + + RL E + E+ + ++ HPNIVKL
Sbjct: 18 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 77
Query: 472 YWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRK 531
++ L+ +F+ + + + T + +GLA+ C +
Sbjct: 78 IHTENKLYLVFEFLHQ----DLKKFMDASALTGIPLPLIKSYLFQLLQGLAF---CHSHR 130
Query: 532 FVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTN 591
+H D+KP N+L++ + ++DFGL+R + P T
Sbjct: 131 VLHRDLKPQNLLINTEGAIKLADFGLARAFGV----------------PVRTYTHEVVTL 174
Query: 592 NYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKS 626
YRAPE + D++S G + E++T ++
Sbjct: 175 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 209
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 91/219 (41%), Gaps = 34/219 (15%)
Query: 415 LGKSGLGIVYKV---VLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAY 471
+G+ G+VYK + G + + RL E + E+ + ++ HPNIVKL
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 472 YWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRK 531
++ L+ +F+ + + + T + +GLA+ C +
Sbjct: 74 IHTENKLYLVFEFLHQ----DLKKFMDASALTGIPLPLIKSYLFQLLQGLAF---CHSHR 126
Query: 532 FVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEK-- 589
+H D+KP N+L++ + ++DFGL+R + PV+T
Sbjct: 127 VLHRDLKPQNLLINTEGAIKLADFGLARAFGV--------------------PVRTYXHE 166
Query: 590 --TNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKS 626
T YRAPE + D++S G + E++T ++
Sbjct: 167 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 205
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 91/219 (41%), Gaps = 34/219 (15%)
Query: 415 LGKSGLGIVYKV---VLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAY 471
+G+ G+VYK + G + + RL E + E+ + ++ HPNIVKL
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 72
Query: 472 YWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRK 531
++ L+ +F+ + + + T + +GLA+ C +
Sbjct: 73 IHTENKLYLVFEFLHQ----DLKKFMDASALTGIPLPLIKSYLFQLLQGLAF---CHSHR 125
Query: 532 FVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEK-- 589
+H D+KP N+L++ + ++DFGL+R + PV+T
Sbjct: 126 VLHRDLKPQNLLINTEGAIKLADFGLARAFGV--------------------PVRTYXHE 165
Query: 590 --TNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKS 626
T YRAPE + D++S G + E++T ++
Sbjct: 166 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 204
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 105/256 (41%), Gaps = 51/256 (19%)
Query: 370 GFRNEDSEVEDQEKVESGK--GEGELVAIDKGFTFELDELLRASAYVLGKSGLGIVYKVV 427
G D E++ +E++E G+ GEG+ + +G +Y
Sbjct: 27 GSSTRDYEIQ-RERIELGRCIGEGQFGDVHQG-----------------------IYMSP 62
Query: 428 LGNGIPVAVRRLGEGGEQRHRE-FVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFIS 486
+ VA++ RE F+ E + + HP+IVKL + +I + +
Sbjct: 63 ENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCT 121
Query: 487 NGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDN 546
G L + L+ R SL ++ + A + LAYL ++FVH DI N+L+ +
Sbjct: 122 LGELRSFLQVRK----YSLDLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSS 174
Query: 547 DFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPM 606
+ + DFGLSR + + +S G + +M P E N R A
Sbjct: 175 NDCVKLGDFGLSRYMEDSTYYKASKGKL---PIKWMAP---ESINFRRFTSAS------- 221
Query: 607 QKWDVYSFGVVLLELL 622
DV+ FGV + E+L
Sbjct: 222 ---DVWMFGVCMWEIL 234
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 91/219 (41%), Gaps = 34/219 (15%)
Query: 415 LGKSGLGIVYKV---VLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAY 471
+G+ G+VYK + G + + RL E + E+ + ++ HPNIVKL
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 472 YWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRK 531
++ L+ +F+ + + + T + +GLA+ C +
Sbjct: 72 IHTENKLYLVFEFLHQ----DLKKFMDASALTGIPLPLIKSYLFQLLQGLAF---CHSHR 124
Query: 532 FVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEK-- 589
+H D+KP N+L++ + ++DFGL+R + PV+T
Sbjct: 125 VLHRDLKPQNLLINTEGAIKLADFGLARAFGV--------------------PVRTYXHE 164
Query: 590 --TNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKS 626
T YRAPE + D++S G + E++T ++
Sbjct: 165 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 203
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 91/219 (41%), Gaps = 34/219 (15%)
Query: 415 LGKSGLGIVYKV---VLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAY 471
+G+ G+VYK + G + + RL E + E+ + ++ HPNIVKL
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 472 YWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRK 531
++ L+ +F+ + + + T + +GLA+ C +
Sbjct: 70 IHTENKLYLVFEFLHQ----DLKKFMDASALTGIPLPLIKSYLFQLLQGLAF---CHSHR 122
Query: 532 FVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEK-- 589
+H D+KP N+L++ + ++DFGL+R + PV+T
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLARAFGV--------------------PVRTYXHE 162
Query: 590 --TNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKS 626
T YRAPE + D++S G + E++T ++
Sbjct: 163 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 201
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 91/219 (41%), Gaps = 34/219 (15%)
Query: 415 LGKSGLGIVYKV---VLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAY 471
+G+ G+VYK + G + + RL E + E+ + ++ HPNIVKL
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 472 YWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRK 531
++ L+ +F+ + + + T + +GLA+ C +
Sbjct: 71 IHTENKLYLVFEFLHQ----DLKKFMDASALTGIPLPLIKSYLFQLLQGLAF---CHSHR 123
Query: 532 FVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEK-- 589
+H D+KP N+L++ + ++DFGL+R + PV+T
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGV--------------------PVRTYXHE 163
Query: 590 --TNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKS 626
T YRAPE + D++S G + E++T ++
Sbjct: 164 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 202
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 91/219 (41%), Gaps = 34/219 (15%)
Query: 415 LGKSGLGIVYKV---VLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAY 471
+G+ G+VYK + G + + RL E + E+ + ++ HPNIVKL
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 472 YWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRK 531
++ L+ +F+ + + + T + +GLA+ C +
Sbjct: 72 IHTENKLYLVFEFLHQ----DLKKFMDASALTGIPLPLIKSYLFQLLQGLAF---CHSHR 124
Query: 532 FVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEK-- 589
+H D+KP N+L++ + ++DFGL+R + PV+T
Sbjct: 125 VLHRDLKPENLLINTEGAIKLADFGLARAFGV--------------------PVRTYXHE 164
Query: 590 --TNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKS 626
T YRAPE + D++S G + E++T ++
Sbjct: 165 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 203
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 88/215 (40%), Gaps = 26/215 (12%)
Query: 415 LGKSGLGIVYKV---VLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAY 471
+G+ G+VYK + G + + RL E + E+ + ++ HPNIVKL
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 472 YWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRK 531
++ L+ +F+ + + + T + +GLA+ C +
Sbjct: 70 IHTENKLYLVFEFLHQ----DLKKFMDASALTGIPLPLIKSYLFQLLQGLAF---CHSHR 122
Query: 532 FVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTN 591
+H D+KP N+L++ + ++DFGL+R + P T
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLARAFGV----------------PVRTYTHEVVTL 166
Query: 592 NYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKS 626
YRAPE + D++S G + E++T ++
Sbjct: 167 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 201
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 91/219 (41%), Gaps = 34/219 (15%)
Query: 415 LGKSGLGIVYKV---VLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAY 471
+G+ G+VYK + G + + RL E + E+ + ++ HPNIVKL
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 472 YWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRK 531
++ L+ +F+ + + + T + +GLA+ C +
Sbjct: 71 IHTENKLYLVFEFLHQ----DLKKFMDASALTGIPLPLIKSYLFQLLQGLAF---CHSHR 123
Query: 532 FVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEK-- 589
+H D+KP N+L++ + ++DFGL+R + PV+T
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGV--------------------PVRTYTHE 163
Query: 590 --TNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKS 626
T YRAPE + D++S G + E++T ++
Sbjct: 164 VVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRA 202
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 88/215 (40%), Gaps = 26/215 (12%)
Query: 415 LGKSGLGIVYKV---VLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAY 471
+G+ G+VYK + G + + RL E + E+ + ++ HPNIVKL
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 472 YWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRK 531
++ L+ +F+ + + + T + +GLA+ C +
Sbjct: 71 IHTENKLYLVFEFLHQ----DLKKFMDASALTGIPLPLIKSYLFQLLQGLAF---CHSHR 123
Query: 532 FVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTN 591
+H D+KP N+L++ + ++DFGL+R + P T
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGV----------------PVRTYTHEVVTL 167
Query: 592 NYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKS 626
YRAPE + D++S G + E++T ++
Sbjct: 168 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 202
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 88/215 (40%), Gaps = 26/215 (12%)
Query: 415 LGKSGLGIVYKV---VLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAY 471
+G+ G+VYK + G + + RL E + E+ + ++ HPNIVKL
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 472 YWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRK 531
++ L+ +F+ + + + T + +GLA+ C +
Sbjct: 70 IHTENKLYLVFEFLHQ----DLKKFMDASALTGIPLPLIKSYLFQLLQGLAF---CHSHR 122
Query: 532 FVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTN 591
+H D+KP N+L++ + ++DFGL+R + P T
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLARAFGV----------------PVRTYTHEVVTL 166
Query: 592 NYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKS 626
YRAPE + D++S G + E++T ++
Sbjct: 167 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 201
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 94/219 (42%), Gaps = 34/219 (15%)
Query: 415 LGKSGLGIVYKV---VLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAY 471
+G+ G+VYK + G + + RL E + E+ + ++ HPNIVKL
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 472 YWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRK 531
++ L+ +F+ + +L + + + T + +GLA+ C +
Sbjct: 71 IHTENKLYLVFEFL-HQDLKDFM---DASALTGIPLPLIKSYLFQLLQGLAF---CHSHR 123
Query: 532 FVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEK-- 589
+H D+KP N+L++ + ++DFGL+R + PV+T
Sbjct: 124 VLHRDLKPENLLINTEGAIKLADFGLARAFGV--------------------PVRTYXHE 163
Query: 590 --TNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKS 626
T YRAPE + D++S G + E++T ++
Sbjct: 164 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 202
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 91/219 (41%), Gaps = 34/219 (15%)
Query: 415 LGKSGLGIVYKV---VLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAY 471
+G+ G+VYK + G + + RL E + E+ + ++ HPNIVKL
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 72
Query: 472 YWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRK 531
++ L+ +F+ + + + T + +GLA+ C +
Sbjct: 73 IHTENKLYLVFEFLHQ----DLKKFMDASALTGIPLPLIKSYLFQLLQGLAF---CHSHR 125
Query: 532 FVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEK-- 589
+H D+KP N+L++ + ++DFGL+R + PV+T
Sbjct: 126 VLHRDLKPENLLINTEGAIKLADFGLARAFGV--------------------PVRTYXHE 165
Query: 590 --TNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKS 626
T YRAPE + D++S G + E++T ++
Sbjct: 166 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 204
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 105/256 (41%), Gaps = 51/256 (19%)
Query: 370 GFRNEDSEVEDQEKVESGK--GEGELVAIDKGFTFELDELLRASAYVLGKSGLGIVYKVV 427
G D E++ +E++E G+ GEG+ + +G +Y
Sbjct: 4 GSSTRDYEIQ-RERIELGRCIGEGQFGDVHQG-----------------------IYMSP 39
Query: 428 LGNGIPVAVRRLGEGGEQRHRE-FVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFIS 486
+ VA++ RE F+ E + + HP+IVKL + +I + +
Sbjct: 40 ENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCT 98
Query: 487 NGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDN 546
G L + L+ R SL ++ + A + LAYL ++FVH DI N+L+ +
Sbjct: 99 LGELRSFLQVRK----YSLDLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSS 151
Query: 547 DFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPM 606
+ + DFGLSR + + +S G + +M P E N R A
Sbjct: 152 NDCVKLGDFGLSRYMEDSTYYKASKGKL---PIKWMAP---ESINFRRFTSAS------- 198
Query: 607 QKWDVYSFGVVLLELL 622
DV+ FGV + E+L
Sbjct: 199 ---DVWMFGVCMWEIL 211
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 91/219 (41%), Gaps = 34/219 (15%)
Query: 415 LGKSGLGIVYKV---VLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAY 471
+G+ G+VYK + G + + RL E + E+ + ++ HPNIVKL
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 472 YWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRK 531
++ L+ +F+ + + + T + +GLA+ C +
Sbjct: 71 IHTENKLYLVFEFLHQ----DLKKFMDASALTGIPLPLIKSYLFQLLQGLAF---CHSHR 123
Query: 532 FVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEK-- 589
+H D+KP N+L++ + ++DFGL+R + PV+T
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGV--------------------PVRTYXHE 163
Query: 590 --TNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKS 626
T YRAPE + D++S G + E++T ++
Sbjct: 164 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 202
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 91/219 (41%), Gaps = 34/219 (15%)
Query: 415 LGKSGLGIVYKV---VLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAY 471
+G+ G+VYK + G + + RL E + E+ + ++ HPNIVKL
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 472 YWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRK 531
++ L+ +F+ + + + T + +GLA+ C +
Sbjct: 71 IHTENKLYLVFEFLHQ----DLKKFMDASALTGIPLPLIKSYLFQLLQGLAF---CHSHR 123
Query: 532 FVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEK-- 589
+H D+KP N+L++ + ++DFGL+R + PV+T
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGV--------------------PVRTYXHE 163
Query: 590 --TNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKS 626
T YRAPE + D++S G + E++T ++
Sbjct: 164 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 202
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 88/215 (40%), Gaps = 26/215 (12%)
Query: 415 LGKSGLGIVYKV---VLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAY 471
+G+ G+VYK + G + + RL E + E+ + ++ HPNIVKL
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 472 YWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRK 531
++ L+ +F+ + + + T + +GLA+ C +
Sbjct: 71 IHTENKLYLVFEFLHQ----DLKKFMDASALTGIPLPLIKSYLFQLLQGLAF---CHSHR 123
Query: 532 FVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTN 591
+H D+KP N+L++ + ++DFGL+R + P T
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGV----------------PVRTYTHEVVTL 167
Query: 592 NYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKS 626
YRAPE + D++S G + E++T ++
Sbjct: 168 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 202
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 91/219 (41%), Gaps = 34/219 (15%)
Query: 415 LGKSGLGIVYKV---VLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAY 471
+G+ G+VYK + G + + RL E + E+ + ++ HPNIVKL
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 72
Query: 472 YWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRK 531
++ L+ +F+ + + + T + +GLA+ C +
Sbjct: 73 IHTENKLYLVFEFLHQ----DLKKFMDASALTGIPLPLIKSYLFQLLQGLAF---CHSHR 125
Query: 532 FVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEK-- 589
+H D+KP N+L++ + ++DFGL+R + PV+T
Sbjct: 126 VLHRDLKPQNLLINTEGAIKLADFGLARAFGV--------------------PVRTYXHE 165
Query: 590 --TNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKS 626
T YRAPE + D++S G + E++T ++
Sbjct: 166 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 204
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 90/221 (40%), Gaps = 35/221 (15%)
Query: 415 LGKSGLGIV---YKVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAY 471
LGK +V KV+ G + + + H++ E + +KHPNIV+L
Sbjct: 19 LGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 78
Query: 472 YWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRK 531
LI D ++ G L + R S + + A LH C
Sbjct: 79 ISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILE-------AVLH-CHQMG 130
Query: 532 FVHGDIKPSNILLDNDFQ---PYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTE 588
VH ++KP N+LL + + ++DFGL+ I + G + GF G
Sbjct: 131 VVHRNLKPENLLLASKLKGAAVKLADFGLA--IEVEGEQ-QAWFGFAG------------ 175
Query: 589 KTNNYRAPEA--RVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
T Y +PE + P +P+ D+++ GV+L LL G P
Sbjct: 176 -TPGYLSPEVLRKDPYGKPV---DLWACGVILYILLVGYPP 212
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 91/219 (41%), Gaps = 34/219 (15%)
Query: 415 LGKSGLGIVYKV---VLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAY 471
+G+ G+VYK + G + + RL E + E+ + ++ HPNIVKL
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 472 YWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRK 531
++ L+ +F+ + + + T + +GLA+ C +
Sbjct: 72 IHTENKLYLVFEFLHQ----DLKKFMDASALTGIPLPLIKSYLFQLLQGLAF---CHSHR 124
Query: 532 FVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEK-- 589
+H D+KP N+L++ + ++DFGL+R + PV+T
Sbjct: 125 VLHRDLKPQNLLINTEGAIKLADFGLARAFGV--------------------PVRTYXHE 164
Query: 590 --TNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKS 626
T YRAPE + D++S G + E++T ++
Sbjct: 165 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 203
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 91/219 (41%), Gaps = 34/219 (15%)
Query: 415 LGKSGLGIVYKV---VLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAY 471
+G+ G+VYK + G + + RL E + E+ + ++ HPNIVKL
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 472 YWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRK 531
++ L+ +F+ + + + T + +GLA+ C +
Sbjct: 70 IHTENKLYLVFEFLHQ----DLKKFMDASALTGIPLPLIKSYLFQLLQGLAF---CHSHR 122
Query: 532 FVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEK-- 589
+H D+KP N+L++ + ++DFGL+R + PV+T
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLARAFGV--------------------PVRTYXHE 162
Query: 590 --TNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKS 626
T YRAPE + D++S G + E++T ++
Sbjct: 163 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 201
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 105/256 (41%), Gaps = 51/256 (19%)
Query: 370 GFRNEDSEVEDQEKVESGK--GEGELVAIDKGFTFELDELLRASAYVLGKSGLGIVYKVV 427
G D E++ +E++E G+ GEG+ + +G +Y
Sbjct: 1 GASTRDYEIQ-RERIELGRCIGEGQFGDVHQG-----------------------IYMSP 36
Query: 428 LGNGIPVAVRRLGEGGEQRHRE-FVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFIS 486
+ VA++ RE F+ E + + HP+IVKL + +I + +
Sbjct: 37 ENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCT 95
Query: 487 NGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDN 546
G L + L+ R SL ++ + A + LAYL ++FVH DI N+L+ +
Sbjct: 96 LGELRSFLQVRK----YSLDLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSS 148
Query: 547 DFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPM 606
+ + DFGLSR + + +S G + +M P E N R A
Sbjct: 149 NDCVKLGDFGLSRYMEDSTYYKASKGKL---PIKWMAP---ESINFRRFTSAS------- 195
Query: 607 QKWDVYSFGVVLLELL 622
DV+ FGV + E+L
Sbjct: 196 ---DVWMFGVCMWEIL 208
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 84/193 (43%), Gaps = 25/193 (12%)
Query: 431 GIPVAVRRLGEGGEQRHRE-FVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGN 489
+ VA++ RE F+ E + + HP+IVKL + +I + + G
Sbjct: 35 ALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGE 93
Query: 490 LANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQ 549
L + L+ R SL ++ + A + LAYL ++FVH DI N+L+ ++
Sbjct: 94 LRSFLQVRK----YSLDLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDC 146
Query: 550 PYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKW 609
+ DFGLSR + + +S G + +M P E N R A
Sbjct: 147 VKLGDFGLSRYMEDSTYYKASKGKL---PIKWMAP---ESINFRRFTSAS---------- 190
Query: 610 DVYSFGVVLLELL 622
DV+ FGV + E+L
Sbjct: 191 DVWMFGVCMWEIL 203
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 55/109 (50%), Gaps = 9/109 (8%)
Query: 517 TARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMG 576
T R + LH + +H D+KPSN+L++++ + DFGL+R+I+ + + S G
Sbjct: 121 TLRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQS 177
Query: 577 GALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGK 625
G + T YRAPE + + + DV+S G +L EL +
Sbjct: 178 GM------TEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 84/193 (43%), Gaps = 25/193 (12%)
Query: 431 GIPVAVRRLGEGGEQRHRE-FVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGN 489
+ VA++ RE F+ E + + HP+IVKL + +I + + G
Sbjct: 38 ALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGE 96
Query: 490 LANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQ 549
L + L+ R SL ++ + A + LAYL ++FVH DI N+L+ ++
Sbjct: 97 LRSFLQVRK----YSLDLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDC 149
Query: 550 PYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKW 609
+ DFGLSR + + +S G + +M P E N R A
Sbjct: 150 VKLGDFGLSRYMEDSTYYKASKGKL---PIKWMAP---ESINFRRFTSAS---------- 193
Query: 610 DVYSFGVVLLELL 622
DV+ FGV + E+L
Sbjct: 194 DVWMFGVCMWEIL 206
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 88/215 (40%), Gaps = 26/215 (12%)
Query: 415 LGKSGLGIVYKV---VLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAY 471
+G+ G+VYK + G + + RL E + E+ + ++ HPNIVKL
Sbjct: 15 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 74
Query: 472 YWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRK 531
++ L+ +F+ + + + T + +GLA+ C +
Sbjct: 75 IHTENKLYLVFEFLHQ----DLKKFMDASALTGIPLPLIKSYLFQLLQGLAF---CHSHR 127
Query: 532 FVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTN 591
+H D+KP N+L++ + ++DFGL+R + P T
Sbjct: 128 VLHRDLKPQNLLINTEGAIKLADFGLARAFGV----------------PVRTYTHEVVTL 171
Query: 592 NYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKS 626
YRAPE + D++S G + E++T ++
Sbjct: 172 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 206
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 104/262 (39%), Gaps = 52/262 (19%)
Query: 449 EFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWS 508
+F+ E + + + HPNIV+L ++ + + G+ LR + L
Sbjct: 158 KFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGAR----LRVK 213
Query: 509 TRLRIAKGTARGLAYLH-ECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNN 567
T L++ A G+ YL +C +H D+ N L+ ISDFG+SR
Sbjct: 214 TLLQMVGDAAAGMEYLESKCC----IHRDLAARNCLVTEKNVLKISDFGMSR--EEADGV 267
Query: 568 PSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKS 626
++SGG PV+ + APEA G R + DV+SFG++L E + G S
Sbjct: 268 YAASGGLR------QVPVK------WTAPEALNYG-RYSSESDVWSFGILLWETFSLGAS 314
Query: 627 PELSPTTSTSIEVPDLVRWVKKGFEEEN---PLSDMVDAMLLQEVHAKKEVIAVFHLALA 683
P P+L + F E+ P ++ AVF L
Sbjct: 315 P-----------YPNLSNQQTREFVEKGGRLPCPELCPD-------------AVFRLMEQ 350
Query: 684 CTEADPEVRPRMKNVSENLERI 705
C +P RP + + L+ I
Sbjct: 351 CWAYEPGQRPSFSTIYQELQSI 372
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 84/193 (43%), Gaps = 25/193 (12%)
Query: 431 GIPVAVRRLGEGGEQRHRE-FVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGN 489
+ VA++ RE F+ E + + HP+IVKL + +I + + G
Sbjct: 38 AMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGE 96
Query: 490 LANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQ 549
L + L+ R SL ++ + A + LAYL ++FVH DI N+L+ ++
Sbjct: 97 LRSFLQVRK----YSLDLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDC 149
Query: 550 PYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKW 609
+ DFGLSR + + +S G + +M P E N R A
Sbjct: 150 VKLGDFGLSRYMEDSTYYKASKGKL---PIKWMAP---ESINFRRFTSAS---------- 193
Query: 610 DVYSFGVVLLELL 622
DV+ FGV + E+L
Sbjct: 194 DVWMFGVCMWEIL 206
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 71/316 (22%), Positives = 121/316 (38%), Gaps = 63/316 (19%)
Query: 415 LGKSGLG-IVYKVVLGNG-----IPVAVRRLGEGGEQRHRE-FVTEVQAIAKV-KHPNIV 466
LG G +V G G + VAV+ L +E ++E++ ++ + +H NIV
Sbjct: 39 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 98
Query: 467 KLRAYYWAPDEKLLISDFISNGNLANALR------------------GRNGQPSTSLSWS 508
L L+I+++ G+L N LR G + + L
Sbjct: 99 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELR 158
Query: 509 TRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNP 568
L + A+G+A+L + + +H D+ N+LL N I DFGL+R I N
Sbjct: 159 DLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN-- 213
Query: 569 SSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPE 628
Y+ + APE+ +Q DV+S+G++L E+ S
Sbjct: 214 ------------YIVKGNARLPVKWMAPESIFDCVYTVQS-DVWSYGILLWEIF---SLG 257
Query: 629 LSPTTSTSIEVPDLVRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEAD 688
L+P + + VK G++ P A K + ++ AC +
Sbjct: 258 LNPYPGILVN-SKFYKLVKDGYQMAQP------------AFAPKNIYSIMQ---ACWALE 301
Query: 689 PEVRPRMKNVSENLER 704
P RP + + L+
Sbjct: 302 PTHRPTFQQICSFLQE 317
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 84/193 (43%), Gaps = 25/193 (12%)
Query: 431 GIPVAVRRLGEGGEQRHRE-FVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGN 489
+ VA++ RE F+ E + + HP+IVKL + +I + + G
Sbjct: 41 ALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGE 99
Query: 490 LANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQ 549
L + L+ R SL ++ + A + LAYL ++FVH DI N+L+ ++
Sbjct: 100 LRSFLQVRK----YSLDLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDC 152
Query: 550 PYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKW 609
+ DFGLSR + + +S G + +M P E N R A
Sbjct: 153 VKLGDFGLSRYMEDSTYYKASKGKL---PIKWMAP---ESINFRRFTSAS---------- 196
Query: 610 DVYSFGVVLLELL 622
DV+ FGV + E+L
Sbjct: 197 DVWMFGVCMWEIL 209
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 93/219 (42%), Gaps = 34/219 (15%)
Query: 415 LGKSGLGIVYKV---VLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAY 471
+G+ G+VYK + G + + RL E + E+ + ++ HPNIVKL
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 472 YWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRK 531
++ L+ +F+ + +L + + T + +GLA+ C +
Sbjct: 74 IHTENKLYLVFEFL-HQDLKTFM---DASALTGIPLPLIKSYLFQLLQGLAF---CHSHR 126
Query: 532 FVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEK-- 589
+H D+KP N+L++ + ++DFGL+R + PV+T
Sbjct: 127 VLHRDLKPQNLLINTEGAIKLADFGLARAFGV--------------------PVRTYXHE 166
Query: 590 --TNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKS 626
T YRAPE + D++S G + E++T ++
Sbjct: 167 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 205
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 82/195 (42%), Gaps = 34/195 (17%)
Query: 449 EFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWS 508
E EV + +V H N++ L Y + +LI + +S G L + L + SLS
Sbjct: 61 EIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKE-----SLSEE 115
Query: 509 TRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNI-LLDNDF-QPYIS--DFGLSRLIN-- 562
K G+ YLH +K H D+KP NI LLD + P+I DFGL+ I
Sbjct: 116 EATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG 172
Query: 563 ITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELL 622
+ N + F+ + +P+ E D++S GV+ LL
Sbjct: 173 VEFKNIFGTPEFVAPEIVNYEPLGLEA--------------------DMWSIGVITYILL 212
Query: 623 TGKSPELSPTTSTSI 637
+G SP L T ++
Sbjct: 213 SGASPFLGDTKQETL 227
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 82/195 (42%), Gaps = 34/195 (17%)
Query: 449 EFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWS 508
E EV + +V H N++ L Y + +LI + +S G L + L + SLS
Sbjct: 61 EIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKE-----SLSEE 115
Query: 509 TRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNI-LLDNDF-QPYIS--DFGLSRLIN-- 562
K G+ YLH +K H D+KP NI LLD + P+I DFGL+ I
Sbjct: 116 EATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG 172
Query: 563 ITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELL 622
+ N + F+ + +P+ E D++S GV+ LL
Sbjct: 173 VEFKNIFGTPEFVAPEIVNYEPLGLEA--------------------DMWSIGVITYILL 212
Query: 623 TGKSPELSPTTSTSI 637
+G SP L T ++
Sbjct: 213 SGASPFLGDTKQETL 227
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 82/195 (42%), Gaps = 34/195 (17%)
Query: 449 EFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWS 508
E EV + +V H N++ L Y + +LI + +S G L + L + SLS
Sbjct: 61 EIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKE-----SLSEE 115
Query: 509 TRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNI-LLDNDF-QPYIS--DFGLSRLIN-- 562
K G+ YLH +K H D+KP NI LLD + P+I DFGL+ I
Sbjct: 116 EATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG 172
Query: 563 ITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELL 622
+ N + F+ + +P+ E D++S GV+ LL
Sbjct: 173 VEFKNIFGTPEFVAPEIVNYEPLGLEA--------------------DMWSIGVITYILL 212
Query: 623 TGKSPELSPTTSTSI 637
+G SP L T ++
Sbjct: 213 SGASPFLGDTKQETL 227
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 82/195 (42%), Gaps = 34/195 (17%)
Query: 449 EFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWS 508
E EV + +V H N++ L Y + +LI + +S G L + L + SLS
Sbjct: 61 EIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKE-----SLSEE 115
Query: 509 TRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNI-LLDNDF-QPYIS--DFGLSRLIN-- 562
K G+ YLH +K H D+KP NI LLD + P+I DFGL+ I
Sbjct: 116 EATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG 172
Query: 563 ITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELL 622
+ N + F+ + +P+ E D++S GV+ LL
Sbjct: 173 VEFKNIFGTPEFVAPEIVNYEPLGLEA--------------------DMWSIGVITYILL 212
Query: 623 TGKSPELSPTTSTSI 637
+G SP L T ++
Sbjct: 213 SGASPFLGDTKQETL 227
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 82/195 (42%), Gaps = 34/195 (17%)
Query: 449 EFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWS 508
E EV + +V H N++ L Y + +LI + +S G L + L + SLS
Sbjct: 61 EIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKE-----SLSEE 115
Query: 509 TRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNI-LLDNDF-QPYIS--DFGLSRLIN-- 562
K G+ YLH +K H D+KP NI LLD + P+I DFGL+ I
Sbjct: 116 EATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG 172
Query: 563 ITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELL 622
+ N + F+ + +P+ E D++S GV+ LL
Sbjct: 173 VEFKNIFGTPEFVAPEIVNYEPLGLEA--------------------DMWSIGVITYILL 212
Query: 623 TGKSPELSPTTSTSI 637
+G SP L T ++
Sbjct: 213 SGASPFLGDTKQETL 227
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 77/179 (43%), Gaps = 27/179 (15%)
Query: 452 TEVQAIAKVKH-PNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTR 510
TE Q + ++ P +V L + + LI D+I+ G L L R +
Sbjct: 107 TERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEV----- 161
Query: 511 LRIAKG-TARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPS 569
+I G L +LH+ ++ DIK NILLD++ ++DFGLS+ +
Sbjct: 162 -QIYVGEIVLALEHLHKLG---IIYRDIKLENILLDSNGHVVLTDFGLSK--EFVADETE 215
Query: 570 SSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKW-DVYSFGVVLLELLTGKSP 627
+ F G T Y AP+ G+ K D +S GV++ ELLTG SP
Sbjct: 216 RAYDFCG-------------TIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASP 261
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 91/221 (41%), Gaps = 36/221 (16%)
Query: 415 LGKSGLGIVYKVVLGN-GIPVAVRRLGEG--GEQRHREFVTEVQAIAKVKHPNIVKLRAY 471
LGK +V + V G+ A + + + ++ E + K++HPNIV+L
Sbjct: 14 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 73
Query: 472 YWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRK 531
L+ D ++ G L + R S + +AY C
Sbjct: 74 IQEESFHYLVFDLVTGGELFEDIVAREFYSEADAS-----HCIQQILESIAY---CHSNG 125
Query: 532 FVHGDIKPSNILLDNDFQ---PYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTE 588
VH ++KP N+LL + + ++DFGL+ I N+ + GF G
Sbjct: 126 IVHRNLKPENLLLASKAKGAAVKLADFGLA----IEVNDSEAWHGFAG------------ 169
Query: 589 KTNNYRAPEA--RVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
T Y +PE + P ++P+ D+++ GV+L LL G P
Sbjct: 170 -TPGYLSPEVLKKDPYSKPV---DIWACGVILYILLVGYPP 206
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 91/221 (41%), Gaps = 36/221 (16%)
Query: 415 LGKSGLGIVYKVVLGN-GIPVAVRRLGEG--GEQRHREFVTEVQAIAKVKHPNIVKLRAY 471
LGK +V + V G+ A + + + ++ E + K++HPNIV+L
Sbjct: 14 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 73
Query: 472 YWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRK 531
L+ D ++ G L + R S + +AY C
Sbjct: 74 IQEESFHYLVFDLVTGGELFEDIVAREFYSEADAS-----HCIQQILESIAY---CHSNG 125
Query: 532 FVHGDIKPSNILLDNDFQ---PYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTE 588
VH ++KP N+LL + + ++DFGL+ I N+ + GF G
Sbjct: 126 IVHRNLKPENLLLASKAKGAAVKLADFGLA----IEVNDSEAWHGFAG------------ 169
Query: 589 KTNNYRAPEA--RVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
T Y +PE + P ++P+ D+++ GV+L LL G P
Sbjct: 170 -TPGYLSPEVLKKDPYSKPV---DIWACGVILYILLVGYPP 206
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 59/126 (46%), Gaps = 24/126 (19%)
Query: 519 RGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGA 578
RGL Y+H +H D+KPSN+ ++ D + I DFGL+R + G++
Sbjct: 165 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR------HTDDEMTGYVA-- 213
Query: 579 LPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIE 638
T YRAPE + D++S G ++ ELLTG++ L P T +
Sbjct: 214 -----------TRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRT--LFPGTDHINQ 260
Query: 639 VPDLVR 644
+ ++R
Sbjct: 261 LQQIMR 266
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 60/128 (46%), Gaps = 24/128 (18%)
Query: 519 RGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGA 578
RGL Y+H +H D+KPSN+ ++ D + I DF L+R + G++
Sbjct: 136 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFYLAR------HTDDEMTGYVA-- 184
Query: 579 LPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIE 638
T YRAPE + Q D++S G ++ ELLTG++ L P T +
Sbjct: 185 -----------TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT--LFPGTDHIDQ 231
Query: 639 VPDLVRWV 646
+ ++R V
Sbjct: 232 LKLILRLV 239
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 100/229 (43%), Gaps = 34/229 (14%)
Query: 404 LDELLRASAY----VLGKSGLGIVYKVVLGNG---IPVAVRRLGEGGEQR---HREFVTE 453
LD RA Y LG+ VYK N + + +LG E + +R + E
Sbjct: 3 LDVKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALRE 62
Query: 454 VQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRI 513
++ + ++ HPNI+ L + L+ DF+ +L ++ S L+ S
Sbjct: 63 IKLLQELSHPNIIGLLDAFGHKSNISLVFDFMET-DLEVIIKDN----SLVLTPSHIKAY 117
Query: 514 AKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGG 573
T +GL YLH+ +H D+KP+N+LLD + ++DFGL++ + +P+ +
Sbjct: 118 MLMTLQGLEYLHQ---HWILHRDLKPNNLLLDENGVLKLADFGLAK----SFGSPNRA-- 168
Query: 574 FMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELL 622
Y V T YRAPE D+++ G +L ELL
Sbjct: 169 -------YXHQVVTRW---YRAPELLFGARMYGVGVDMWAVGCILAELL 207
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 105/232 (45%), Gaps = 56/232 (24%)
Query: 415 LGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQR-HREFVTEVQAIAKVKHPNIVKLRAYYW 473
+GK G V++ L +G VAV+ EQ RE TE+ ++H NI+ A
Sbjct: 16 VGKGRYGEVWRG-LWHGESVAVKIFSSRDEQSWFRE--TEIYNTVLLRHDNILGFIASDM 72
Query: 474 ----APDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLH---- 525
+ + LI+ + +G+L + L+ + +P +L R+A A GLA+LH
Sbjct: 73 TSRNSSTQLWLITHYHEHGSLYDFLQRQTLEPHLAL------RLAVSAACGLAHLHVEIF 126
Query: 526 --ECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRL-------INITGNNPSSSGGFMG 576
+ P H D K N+L+ ++ Q I+D GL+ + ++I GNNP
Sbjct: 127 GTQGKP-AIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDI-GNNPRV------ 178
Query: 577 GALPYMKP------VQTEKTNNYRAPEARVPGNRPMQKW-DVYSFGVVLLEL 621
G YM P ++T+ +Y KW D+++FG+VL E+
Sbjct: 179 GTKRYMAPEVLDEQIRTDCFESY--------------KWTDIWAFGLVLWEI 216
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 88/215 (40%), Gaps = 26/215 (12%)
Query: 415 LGKSGLGIVYKV---VLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAY 471
+G+ G+VYK + G + + RL E + E+ + ++ HPNIVKL
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 472 YWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRK 531
++ L+ +F+ + + + T + +GL++ C +
Sbjct: 71 IHTENKLYLVFEFLHQ----DLKKFMDASALTGIPLPLIKSYLFQLLQGLSF---CHSHR 123
Query: 532 FVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTN 591
+H D+KP N+L++ + ++DFGL+R + P T
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGV----------------PVRTYTHEVVTL 167
Query: 592 NYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKS 626
YRAPE + D++S G + E++T ++
Sbjct: 168 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 202
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 91/221 (41%), Gaps = 36/221 (16%)
Query: 415 LGKSGLGIVYKVVLGN-GIPVAVRRLGEG--GEQRHREFVTEVQAIAKVKHPNIVKLRAY 471
LGK +V + V G+ A + + + ++ E + K++HPNIV+L
Sbjct: 13 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 72
Query: 472 YWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRK 531
L+ D ++ G L + R S + +AY C
Sbjct: 73 IQEESFHYLVFDLVTGGELFEDIVAREFYSEADAS-----HCIQQILESIAY---CHSNG 124
Query: 532 FVHGDIKPSNILLDNDFQ---PYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTE 588
VH ++KP N+LL + + ++DFGL+ I N+ + GF G
Sbjct: 125 IVHRNLKPENLLLASKAKGAAVKLADFGLA----IEVNDSEAWHGFAG------------ 168
Query: 589 KTNNYRAPEA--RVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
T Y +PE + P ++P+ D+++ GV+L LL G P
Sbjct: 169 -TPGYLSPEVLKKDPYSKPV---DIWACGVILYILLVGYPP 205
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 60/128 (46%), Gaps = 24/128 (18%)
Query: 519 RGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGA 578
RGL Y+H +H D+KPSN+ ++ D + I FGL+R + G++
Sbjct: 136 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILGFGLAR------HTDDEMTGYVA-- 184
Query: 579 LPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIE 638
T YRAPE + Q D++S G ++ ELLTG++ L P T +
Sbjct: 185 -----------TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT--LFPGTDHIDQ 231
Query: 639 VPDLVRWV 646
+ ++R V
Sbjct: 232 LKLILRLV 239
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 60/128 (46%), Gaps = 24/128 (18%)
Query: 519 RGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGA 578
RGL Y+H +H D+KPSN+ ++ D + I D GL+R + G++
Sbjct: 136 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDAGLAR------HTDDEMTGYVA-- 184
Query: 579 LPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIE 638
T YRAPE + Q D++S G ++ ELLTG++ L P T +
Sbjct: 185 -----------TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT--LFPGTDHIDQ 231
Query: 639 VPDLVRWV 646
+ ++R V
Sbjct: 232 LKLILRLV 239
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 76/180 (42%), Gaps = 23/180 (12%)
Query: 449 EFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWS 508
+F+ EV A+ + H N+++L P K+ +++ G+L + LR G
Sbjct: 67 DFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGH----FLLG 121
Query: 509 TRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNP 568
T R A A G+ YL ++F+H D+ N+LL I DFGL R + ++
Sbjct: 122 TLSRYAVQVAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH- 177
Query: 569 SSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKSP 627
Y+ + + APE+ + D + FGV L E+ T G+ P
Sbjct: 178 ------------YVMQEHRKVPFAWCAPES-LKTRTFSHASDTWMFGVTLWEMFTYGQEP 224
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 92/224 (41%), Gaps = 30/224 (13%)
Query: 415 LGKSGLGIVYKVV-LGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYW 473
LG G VYK G A + + E+ +++ E++ +A HP IVKL Y+
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 78
Query: 474 APDEKLLISDFISNGNLANAL----RGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSP 529
+ ++ +F G + + RG +P + + + L +LH
Sbjct: 79 HDGKLWIMIEFCPGGAVDAIMLELDRGLT-EPQIQV-------VCRQMLEALNFLHS--- 127
Query: 530 RKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEK 589
++ +H D+K N+L+ + ++DFG+S T S G P + +T K
Sbjct: 128 KRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMK 187
Query: 590 TNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP--ELSP 631
Y K D++S G+ L+E+ + P EL+P
Sbjct: 188 DTPYD------------YKADIWSLGITLIEMAQIEPPHHELNP 219
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 86/193 (44%), Gaps = 25/193 (12%)
Query: 431 GIPVAVRRLGEGGEQRHRE-FVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGN 489
+ VA++ RE F+ E + + HP+IVKL + +I + + G
Sbjct: 418 AMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGE 476
Query: 490 LANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQ 549
L + L+ R SL ++ + A + LAYL ++FVH DI N+L+ ++
Sbjct: 477 LRSFLQVRK----FSLDLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDC 529
Query: 550 PYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKW 609
+ DFGLSR + + +S G P++ + APE+ + R
Sbjct: 530 VKLGDFGLSRYMEDSTYYKASKGKL---------PIK------WMAPES-INFRRFTSAS 573
Query: 610 DVYSFGVVLLELL 622
DV+ FGV + E+L
Sbjct: 574 DVWMFGVCMWEIL 586
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 76/180 (42%), Gaps = 23/180 (12%)
Query: 449 EFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWS 508
+F+ EV A+ + H N+++L P K+ +++ G+L + LR G
Sbjct: 61 DFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGH----FLLG 115
Query: 509 TRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNP 568
T R A A G+ YL ++F+H D+ N+LL I DFGL R + ++
Sbjct: 116 TLSRYAVQVAEGMGYL---ESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH- 171
Query: 569 SSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKSP 627
Y+ + + APE+ + D + FGV L E+ T G+ P
Sbjct: 172 ------------YVMQEHRKVPFAWCAPES-LKTRTFSHASDTWMFGVTLWEMFTYGQEP 218
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 60/128 (46%), Gaps = 24/128 (18%)
Query: 519 RGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGA 578
RGL Y+H +H D+KPSN+ ++ D + I D GL+R + G++
Sbjct: 136 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDRGLAR------HTDDEMTGYVA-- 184
Query: 579 LPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIE 638
T YRAPE + Q D++S G ++ ELLTG++ L P T +
Sbjct: 185 -----------TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT--LFPGTDHIDQ 231
Query: 639 VPDLVRWV 646
+ ++R V
Sbjct: 232 LKLILRLV 239
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 92/223 (41%), Gaps = 28/223 (12%)
Query: 415 LGKSGLGIVYKVV-LGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYW 473
LG G VYK G A + + E+ +++ E++ +A HP IVKL Y+
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 86
Query: 474 APDEKLLISDFISNGNL-ANALRGRNG--QPSTSLSWSTRLRIAKGTARGLAYLHECSPR 530
+ ++ +F G + A L G +P + + + L +LH +
Sbjct: 87 HDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQV-------VCRQMLEALNFLHS---K 136
Query: 531 KFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKT 590
+ +H D+K N+L+ + ++DFG+S T S G P + +T K
Sbjct: 137 RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKD 196
Query: 591 NNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP--ELSP 631
Y K D++S G+ L+E+ + P EL+P
Sbjct: 197 TPYD------------YKADIWSLGITLIEMAQIEPPHHELNP 227
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 79/205 (38%), Gaps = 38/205 (18%)
Query: 434 VAVRRLGEGG---EQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNL 490
VAV+ + G E RE + ++HPNIV+ + P +I ++ S G L
Sbjct: 48 VAVKYIERGAAIDENVQREIINH----RSLRHPNIVRFKEVILTPTHLAIIMEYASGGEL 103
Query: 491 ANAL--RGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDF 548
+ GR + + L G++Y C + H D+K N LLD
Sbjct: 104 YERICNAGRFSEDEARFFFQQLL-------SGVSY---CHSMQICHRDLKLENTLLDGSP 153
Query: 549 QPY--ISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPM 606
P I DFG S+ ++ + +P T T Y APE +
Sbjct: 154 APRLKICDFGYSK-----------------SSVLHSQPKSTVGTPAYIAPEVLLRQEYDG 196
Query: 607 QKWDVYSFGVVLLELLTGKSPELSP 631
+ DV+S GV L +L G P P
Sbjct: 197 KIADVWSCGVTLYVMLVGAYPFEDP 221
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 76/180 (42%), Gaps = 23/180 (12%)
Query: 449 EFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWS 508
+F+ EV A+ + H N+++L P K+ +++ G+L + LR G
Sbjct: 57 DFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGH----FLLG 111
Query: 509 TRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNP 568
T R A A G+ YL ++F+H D+ N+LL I DFGL R + ++
Sbjct: 112 TLSRYAVQVAEGMGYL---ESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH- 167
Query: 569 SSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKSP 627
Y+ + + APE+ + D + FGV L E+ T G+ P
Sbjct: 168 ------------YVMQEHRKVPFAWCAPES-LKTRTFSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 122/299 (40%), Gaps = 53/299 (17%)
Query: 414 VLGKSGLGIVYKVVL----GNGIPVAVRRLGEGGEQRHRE-FVTEVQAIAKVKHPNIVKL 468
+LG+ G VY+ V G I VAV+ + ++E F++E + + HP+IVKL
Sbjct: 31 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 90
Query: 469 RAYYWAPDEKLLISDFISNGNLANAL-RGRNGQPSTSLSWSTRLRIAKGTARGLAYLHEC 527
+ +I + G L + L R +N SL T + + + +AYL
Sbjct: 91 IGII-EEEPTWIIMELYPYGELGHYLERNKN-----SLKVLTLVLYSLQICKAMAYLESI 144
Query: 528 SPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQT 587
+ VH DI NIL+ + + DFGLSR I Y K T
Sbjct: 145 N---CVHRDIAVRNILVASPECVKLGDFGLSRYIEDED---------------YYKASVT 186
Query: 588 EKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTSIEVPDLVRWV 646
+ +PE+ + R DV+ F V + E+L+ GK P +E D++ +
Sbjct: 187 RLPIKWMSPES-INFRRFTTASDVWMFAVCMWEILSFGKQPFF------WLENKDVIGVL 239
Query: 647 KKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERI 705
+KG + P D+ +L + L C + DP RPR + +L +
Sbjct: 240 EKG--DRLPKPDLCPPVL-------------YTLMTRCWDYDPSDRPRFTELVCSLSDV 283
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 82/193 (42%), Gaps = 25/193 (12%)
Query: 431 GIPVAVRRLGEGGEQRHRE-FVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGN 489
+ VA++ RE F+ E + + HP+IVKL + +I + + G
Sbjct: 38 AMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGE 96
Query: 490 LANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQ 549
L + L+ R SL ++ + A + LAYL ++FVH DI N+L+
Sbjct: 97 LRSFLQVRK----FSLDLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSATDC 149
Query: 550 PYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKW 609
+ DFGLSR + + +S G + +M P E N R A
Sbjct: 150 VKLGDFGLSRYMEDSTYYKASKGKL---PIKWMAP---ESINFRRFTSAS---------- 193
Query: 610 DVYSFGVVLLELL 622
DV+ FGV + E+L
Sbjct: 194 DVWMFGVCMWEIL 206
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 76/180 (42%), Gaps = 23/180 (12%)
Query: 449 EFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWS 508
+F+ EV A+ + H N+++L P K+ +++ G+L + LR G
Sbjct: 61 DFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGH----FLLG 115
Query: 509 TRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNP 568
T R A A G+ YL ++F+H D+ N+LL I DFGL R + ++
Sbjct: 116 TLSRYAVQVAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH- 171
Query: 569 SSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKSP 627
Y+ + + APE+ + D + FGV L E+ T G+ P
Sbjct: 172 ------------YVMQEHRKVPFAWCAPES-LKTRTFSHASDTWMFGVTLWEMFTYGQEP 218
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 91/221 (41%), Gaps = 36/221 (16%)
Query: 415 LGKSGLGIVYKVVLGN-GIPVAVRRLGEG--GEQRHREFVTEVQAIAKVKHPNIVKLRAY 471
LGK +V + V G+ A + + + ++ E + K++HPNIV+L
Sbjct: 37 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 96
Query: 472 YWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRK 531
L+ D ++ G L + R S + +AY C
Sbjct: 97 IQEESFHYLVFDLVTGGELFEDIVAREFYSEADAS-----HCIQQILESIAY---CHSNG 148
Query: 532 FVHGDIKPSNILLDNDFQ---PYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTE 588
VH ++KP N+LL + + ++DFGL+ I N+ + GF G
Sbjct: 149 IVHRNLKPENLLLASKAKGAAVKLADFGLA----IEVNDSEAWHGFAG------------ 192
Query: 589 KTNNYRAPEA--RVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
T Y +PE + P ++P+ D+++ GV+L LL G P
Sbjct: 193 -TPGYLSPEVLKKDPYSKPV---DIWACGVILYILLVGYPP 229
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 54/108 (50%), Gaps = 15/108 (13%)
Query: 519 RGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGA 578
RGL Y+H + +H D+KPSN+L++ + + I DFG++R + +P+ FM
Sbjct: 169 RGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMARGL---CTSPAEHQYFM--- 219
Query: 579 LPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKS 626
+ T YRAPE + + Q D++S G + E+L +
Sbjct: 220 ------TEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 261
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 76/180 (42%), Gaps = 23/180 (12%)
Query: 449 EFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWS 508
+F+ EV A+ + H N+++L P K+ +++ G+L + LR G
Sbjct: 57 DFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGH----FLLG 111
Query: 509 TRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNP 568
T R A A G+ YL ++F+H D+ N+LL I DFGL R + ++
Sbjct: 112 TLSRYAVQVAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH- 167
Query: 569 SSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKSP 627
Y+ + + APE+ + D + FGV L E+ T G+ P
Sbjct: 168 ------------YVMQEHRKVPFAWCAPES-LKTRTFSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 122/299 (40%), Gaps = 53/299 (17%)
Query: 414 VLGKSGLGIVYKVVL----GNGIPVAVRRLGEGGEQRHRE-FVTEVQAIAKVKHPNIVKL 468
+LG+ G VY+ V G I VAV+ + ++E F++E + + HP+IVKL
Sbjct: 19 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 78
Query: 469 RAYYWAPDEKLLISDFISNGNLANAL-RGRNGQPSTSLSWSTRLRIAKGTARGLAYLHEC 527
+ +I + G L + L R +N SL T + + + +AYL
Sbjct: 79 IGII-EEEPTWIIMELYPYGELGHYLERNKN-----SLKVLTLVLYSLQICKAMAYLESI 132
Query: 528 SPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQT 587
+ VH DI NIL+ + + DFGLSR I Y K T
Sbjct: 133 N---CVHRDIAVRNILVASPECVKLGDFGLSRYIEDED---------------YYKASVT 174
Query: 588 EKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTSIEVPDLVRWV 646
+ +PE+ + R DV+ F V + E+L+ GK P +E D++ +
Sbjct: 175 RLPIKWMSPES-INFRRFTTASDVWMFAVCMWEILSFGKQPFF------WLENKDVIGVL 227
Query: 647 KKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERI 705
+KG + P D+ +L + L C + DP RPR + +L +
Sbjct: 228 EKG--DRLPKPDLCPPVL-------------YTLMTRCWDYDPSDRPRFTELVCSLSDV 271
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 89/206 (43%), Gaps = 36/206 (17%)
Query: 434 VAVRRLGEGGEQRHREFVTEVQAIAKVK----HPNIVKLRAYYWAPDEKLLISDFISNGN 489
V VRR+ E E VT +Q V HPNIV RA + A +E +++ F++ G+
Sbjct: 39 VTVRRINL--EACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGS 96
Query: 490 LANAL--RGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDND 547
+ + +G ++++ I +G + L Y+H +VH +K S+IL+ D
Sbjct: 97 AKDLICTHFMDGMNELAIAY-----ILQGVLKALDYIHHMG---YVHRSVKASHILISVD 148
Query: 548 FQPYISDFGLSRLINITGNNPSSS-----GGFMGGALPYMKP-VQTEKTNNYRAPEARVP 601
+ Y+S GL +++ + + LP++ P V + Y A
Sbjct: 149 GKVYLS--GLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDA------ 200
Query: 602 GNRPMQKWDVYSFGVVLLELLTGKSP 627
K D+YS G+ EL G P
Sbjct: 201 ------KSDIYSVGITACELANGHVP 220
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 54/107 (50%), Gaps = 15/107 (14%)
Query: 519 RGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGA 578
RGL Y+H + +H D+KPSN+L++ + + I DFG++R + +P+ FM
Sbjct: 170 RGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMARGL---CTSPAEHQYFM--- 220
Query: 579 LPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGK 625
+ T YRAPE + + Q D++S G + E+L +
Sbjct: 221 ------TEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARR 261
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 103/259 (39%), Gaps = 54/259 (20%)
Query: 414 VLGKSGLGIVYKVVLGNGIP---VAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRA 470
VLG+ G V K N + A++++ E++ ++EV +A + H +V+
Sbjct: 13 VLGQGAFGQVVKA--RNALDSRYYAIKKI-RHTEEKLSTILSEVMLLASLNHQYVVR--- 66
Query: 471 YYWAPDEK---------------LLIS-DFISNGNLANALRGRNGQPSTSLSWSTRLRIA 514
YY A E+ L I ++ NG L + + N W R+
Sbjct: 67 YYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYW----RLF 122
Query: 515 KGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSR-------LINITGNN 567
+ L+Y+H + +H D+KP NI +D I DFGL++ ++ + N
Sbjct: 123 RQILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQN 179
Query: 568 PSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELL----T 623
S + A+ T Y A E +K D+YS G++ E++ T
Sbjct: 180 LPGSSDNLTSAIG---------TAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYPFST 230
Query: 624 G--KSPELSPTTSTSIEVP 640
G + L S SIE P
Sbjct: 231 GMERVNILKKLRSVSIEFP 249
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 89/206 (43%), Gaps = 36/206 (17%)
Query: 434 VAVRRLGEGGEQRHREFVTEVQAIAKVK----HPNIVKLRAYYWAPDEKLLISDFISNGN 489
V VRR+ E E VT +Q V HPNIV RA + A +E +++ F++ G+
Sbjct: 55 VTVRRINL--EACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGS 112
Query: 490 LANAL--RGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDND 547
+ + +G ++++ I +G + L Y+H +VH +K S+IL+ D
Sbjct: 113 AKDLICTHFMDGMNELAIAY-----ILQGVLKALDYIHHMG---YVHRSVKASHILISVD 164
Query: 548 FQPYISDFGLSRLINITGNNPSSS-----GGFMGGALPYMKP-VQTEKTNNYRAPEARVP 601
+ Y+S GL +++ + + LP++ P V + Y A
Sbjct: 165 GKVYLS--GLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDA------ 216
Query: 602 GNRPMQKWDVYSFGVVLLELLTGKSP 627
K D+YS G+ EL G P
Sbjct: 217 ------KSDIYSVGITACELANGHVP 236
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 90/221 (40%), Gaps = 35/221 (15%)
Query: 415 LGKSGLGIV---YKVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAY 471
LGK +V K+ G + + + H++ E + +KHPNIV+L
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 71
Query: 472 YWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRK 531
L+ D ++ G L + R S + + L ++ C
Sbjct: 72 ISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQ--------QILESVNHCHLNG 123
Query: 532 FVHGDIKPSNILLDNDFQ---PYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTE 588
VH D+KP N+LL + + ++DFGL+ I + G+ + GF G
Sbjct: 124 IVHRDLKPENLLLASKSKGAAVKLADFGLA--IEVQGDQ-QAWFGFAG------------ 168
Query: 589 KTNNYRAPEA--RVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
T Y +PE + P +P+ D+++ GV+L LL G P
Sbjct: 169 -TPGYLSPEVLRKDPYGKPV---DMWACGVILYILLVGYPP 205
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 90/221 (40%), Gaps = 35/221 (15%)
Query: 415 LGKSGLGIV---YKVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAY 471
LGK +V K+ G + + + H++ E + +KHPNIV+L
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 71
Query: 472 YWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRK 531
L+ D ++ G L + R S + + L ++ C
Sbjct: 72 ISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQ--------QILESVNHCHLNG 123
Query: 532 FVHGDIKPSNILLDNDFQ---PYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTE 588
VH D+KP N+LL + + ++DFGL+ I + G+ + GF G
Sbjct: 124 IVHRDLKPENLLLASKSKGAAVKLADFGLA--IEVQGDQ-QAWFGFAG------------ 168
Query: 589 KTNNYRAPEA--RVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
T Y +PE + P +P+ D+++ GV+L LL G P
Sbjct: 169 -TPGYLSPEVLRKDPYGKPV---DMWACGVILYILLVGYPP 205
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 60/128 (46%), Gaps = 24/128 (18%)
Query: 519 RGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGA 578
RGL Y+H +H D+KPSN+ ++ D + I D GL+R + G++
Sbjct: 136 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDGGLAR------HTDDEMTGYVA-- 184
Query: 579 LPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIE 638
T YRAPE + Q D++S G ++ ELLTG++ L P T +
Sbjct: 185 -----------TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT--LFPGTDHIDQ 231
Query: 639 VPDLVRWV 646
+ ++R V
Sbjct: 232 LKLILRLV 239
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 80/202 (39%), Gaps = 32/202 (15%)
Query: 434 VAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANA 493
VAV+ + E GE+ E+ ++HPNIV+ + P ++ ++ S G L
Sbjct: 46 VAVKYI-ERGEKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFER 104
Query: 494 L--RGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPY 551
+ GR + + + G++Y C + H D+K N LLD P
Sbjct: 105 ICNAGRFSEDEARFFFQQLI-------SGVSY---CHAMQVCHRDLKLENTLLDGSPAPR 154
Query: 552 --ISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKW 609
I DFG S+ ++ + +P T T Y APE + +
Sbjct: 155 LKICDFGYSK-----------------SSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKVA 197
Query: 610 DVYSFGVVLLELLTGKSPELSP 631
DV+S GV L +L G P P
Sbjct: 198 DVWSCGVTLYVMLVGAYPFEDP 219
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 122/299 (40%), Gaps = 53/299 (17%)
Query: 414 VLGKSGLGIVYKVVL----GNGIPVAVRRLGEGGEQRHRE-FVTEVQAIAKVKHPNIVKL 468
+LG+ G VY+ V G I VAV+ + ++E F++E + + HP+IVKL
Sbjct: 15 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 74
Query: 469 RAYYWAPDEKLLISDFISNGNLANAL-RGRNGQPSTSLSWSTRLRIAKGTARGLAYLHEC 527
+ +I + G L + L R +N SL T + + + +AYL
Sbjct: 75 IGII-EEEPTWIIMELYPYGELGHYLERNKN-----SLKVLTLVLYSLQICKAMAYLESI 128
Query: 528 SPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQT 587
+ VH DI NIL+ + + DFGLSR I Y K T
Sbjct: 129 NC---VHRDIAVRNILVASPECVKLGDFGLSRYIEDED---------------YYKASVT 170
Query: 588 EKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTSIEVPDLVRWV 646
+ +PE+ + R DV+ F V + E+L+ GK P +E D++ +
Sbjct: 171 RLPIKWMSPES-INFRRFTTASDVWMFAVCMWEILSFGKQPFF------WLENKDVIGVL 223
Query: 647 KKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERI 705
+KG + P D+ +L + L C + DP RPR + +L +
Sbjct: 224 EKG--DRLPKPDLCPPVL-------------YTLMTRCWDYDPSDRPRFTELVCSLSDV 267
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 90/219 (41%), Gaps = 34/219 (15%)
Query: 415 LGKSGLGIVYKV---VLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAY 471
+G+ G+VYK + G + + RL E + E+ + ++ HPNIVKL
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 472 YWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRK 531
++ L+ + + + + + T + +GLA+ C +
Sbjct: 74 IHTENKLYLVFEHVDQ----DLKKFMDASALTGIPLPLIKSYLFQLLQGLAF---CHSHR 126
Query: 532 FVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEK-- 589
+H D+KP N+L++ + ++DFGL+R + PV+T
Sbjct: 127 VLHRDLKPQNLLINTEGAIKLADFGLARAFGV--------------------PVRTYXHE 166
Query: 590 --TNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKS 626
T YRAPE + D++S G + E++T ++
Sbjct: 167 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 205
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 51/108 (47%), Gaps = 22/108 (20%)
Query: 519 RGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGA 578
+GL Y+H VH D+KP N+ ++ D + I DFGL+R + M G
Sbjct: 137 KGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLAR----------HADAEMTGY 183
Query: 579 LPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKS 626
+ T YRAPE + Q D++S G ++ E+LTGK+
Sbjct: 184 VV---------TRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKT 222
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 101/245 (41%), Gaps = 46/245 (18%)
Query: 397 DKGFTFELDELLRASAYVLGKSGLGIVYK-VVLGNGIPVAVRRLGEGGEQRHREFVTEVQ 455
D FEL EL+ G G VYK + G A++ + G++ E E+
Sbjct: 21 DPAGIFELVELV-------GNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEE-EEIKQEIN 72
Query: 456 AIAKVKHPNIVKLRAYYWA---------PDEKLLISDFISNGNLANALRGRNGQPSTSLS 506
+ K H + YY A D+ L+ +F G++ + ++ G +L
Sbjct: 73 MLKKYSHHR--NIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKG---NTLK 127
Query: 507 WSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGN 566
I + RGL++LH+ K +H DIK N+LL + + + DFG+S ++ T
Sbjct: 128 EEWIAYICREILRGLSHLHQ---HKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVG 184
Query: 567 NPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKW----DVYSFGVVLLELL 622
++ F+G PY + APE P + D++S G+ +E+
Sbjct: 185 RRNT---FIG--TPY-----------WMAPEVIACDENPDATYDFKSDLWSLGITAIEMA 228
Query: 623 TGKSP 627
G P
Sbjct: 229 EGAPP 233
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 72/178 (40%), Gaps = 27/178 (15%)
Query: 451 VTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANAL-RGRNGQPSTSLSWST 509
VTE + + +HP + L+ + D + ++ + G L L R R + +
Sbjct: 53 VTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGA 112
Query: 510 RLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPS 569
+ L YLH R V+ DIK N++LD D I+DFGL + G +
Sbjct: 113 EI------VSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK----EGISDG 159
Query: 570 SSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
++ G Y+ P E + RA D + GVV+ E++ G+ P
Sbjct: 160 ATMKXFCGTPEYLAPEVLEDNDYGRAV-------------DWWGLGVVMYEMMCGRLP 204
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 72/178 (40%), Gaps = 27/178 (15%)
Query: 451 VTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANAL-RGRNGQPSTSLSWST 509
VTE + + +HP + L+ + D + ++ + G L L R R + +
Sbjct: 58 VTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGA 117
Query: 510 RLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPS 569
+ L YLH R V+ DIK N++LD D I+DFGL + G +
Sbjct: 118 EI------VSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK----EGISDG 164
Query: 570 SSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
++ G Y+ P E + RA D + GVV+ E++ G+ P
Sbjct: 165 ATMKXFCGTPEYLAPEVLEDNDYGRAV-------------DWWGLGVVMYEMMCGRLP 209
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 52/108 (48%), Gaps = 22/108 (20%)
Query: 519 RGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGA 578
+GL Y+H VH D+KP N+ ++ D + I DFGL+R + + G++
Sbjct: 155 KGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLAR------HADAEMTGYVV-- 203
Query: 579 LPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKS 626
T YRAPE + Q D++S G ++ E+LTGK+
Sbjct: 204 -----------TRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKT 240
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 82/202 (40%), Gaps = 32/202 (15%)
Query: 434 VAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANA 493
VAV+ + E GE+ E+ ++HPNIV+ + P ++ ++ S G L
Sbjct: 47 VAVKYI-ERGEKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFER 105
Query: 494 L--RGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPY 551
+ GR + + + G++Y H + H D+K N LLD P
Sbjct: 106 ICNAGRFSEDEARFFFQQLI-------SGVSYAHAM---QVAHRDLKLENTLLDGSPAPR 155
Query: 552 --ISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKW 609
I+DFG S+ ++ + P S+ G T Y APE + +
Sbjct: 156 LKIADFGYSKA-SVLHSQPKSAVG----------------TPAYIAPEVLLKKEYDGKVA 198
Query: 610 DVYSFGVVLLELLTGKSPELSP 631
DV+S GV L +L G P P
Sbjct: 199 DVWSCGVTLYVMLVGAYPFEDP 220
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 53/113 (46%), Gaps = 8/113 (7%)
Query: 449 EFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWS 508
+F+ EV A+ + H N+++L P K+ +++ G+L + LR G
Sbjct: 67 DFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGH----FLLG 121
Query: 509 TRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLI 561
T R A A G+ YL ++F+H D+ N+LL I DFGL R +
Sbjct: 122 TLSRYAVQVAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRAL 171
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 89/215 (41%), Gaps = 26/215 (12%)
Query: 415 LGKSGLGIVYKV---VLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAY 471
+G+ G+VYK + G + + RL E + E+ + ++ HPNIVKL
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 472 YWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRK 531
++ L+ + + + +L + + T + +GLA+ C +
Sbjct: 70 IHTENKLYLVFEHV-HQDLKTFM---DASALTGIPLPLIKSYLFQLLQGLAF---CHSHR 122
Query: 532 FVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTN 591
+H D+KP N+L++ + ++DFGL+R + P T
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLARAFGV----------------PVRTYTHEVVTL 166
Query: 592 NYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKS 626
YRAPE + D++S G + E++T ++
Sbjct: 167 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 201
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 84/193 (43%), Gaps = 25/193 (12%)
Query: 431 GIPVAVRRLGEGGEQRHRE-FVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGN 489
+ VA++ RE F+ E + + HP+IVKL + +I + + G
Sbjct: 418 AMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGE 476
Query: 490 LANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQ 549
L + L+ R SL ++ + A + LAYL ++FVH DI N+L+
Sbjct: 477 LRSFLQVRK----FSLDLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSATDC 529
Query: 550 PYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKW 609
+ DFGLSR + + +S G P++ + APE+ + R
Sbjct: 530 VKLGDFGLSRYMEDSTYYKASKGKL---------PIK------WMAPES-INFRRFTSAS 573
Query: 610 DVYSFGVVLLELL 622
DV+ FGV + E+L
Sbjct: 574 DVWMFGVCMWEIL 586
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 72/178 (40%), Gaps = 27/178 (15%)
Query: 451 VTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANAL-RGRNGQPSTSLSWST 509
VTE + + +HP + L+ + D + ++ + G L L R R + +
Sbjct: 53 VTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGA 112
Query: 510 RLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPS 569
+ L YLH R V+ DIK N++LD D I+DFGL + G +
Sbjct: 113 EI------VSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK----EGISDG 159
Query: 570 SSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
++ G Y+ P E + RA D + GVV+ E++ G+ P
Sbjct: 160 ATMKXFCGTPEYLAPEVLEDNDYGRAV-------------DWWGLGVVMYEMMCGRLP 204
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 110/276 (39%), Gaps = 71/276 (25%)
Query: 415 LGKSGLGIVYKVVLGNGIP---VAVRRLGEGGEQRHREFVT-EVQAIAKVKHPNIVK-LR 469
+G+ G G+V++ N + A++R+ + RE V EV+A+AK++HP IV+
Sbjct: 14 MGRGGFGVVFEA--KNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFN 71
Query: 470 AYYWAPDEK-------LLISDFISNGNL-------ANALRGRNGQPSTSLS--------- 506
A+ P EK + + D ++ L A +++ R P ++ +
Sbjct: 72 AWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSS 131
Query: 507 -------------------WSTR------------LRIAKGTARGLAYLHECSPRKFVHG 535
W R L I A + +LH + +H
Sbjct: 132 PKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHS---KGLMHR 188
Query: 536 DIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALP-YMKPVQTEKTNNYR 594
D+KPSNI D + DFGL +T + + +P Y T Y
Sbjct: 189 DLKPSNIFFTMDDVVKVGDFGL-----VTAMDQDEEEQTVLTPMPAYATHXGQVGTKLYM 243
Query: 595 APEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELS 630
+PE ++ GN K D++S G++L ELL S ++
Sbjct: 244 SPE-QIHGNNYSHKVDIFSLGLILFELLYSFSTQME 278
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 53/113 (46%), Gaps = 8/113 (7%)
Query: 449 EFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWS 508
+F+ EV A+ + H N+++L P K+ +++ G+L + LR G
Sbjct: 57 DFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGH----FLLG 111
Query: 509 TRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLI 561
T R A A G+ YL ++F+H D+ N+LL I DFGL R +
Sbjct: 112 TLSRYAVQVAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRAL 161
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 80/202 (39%), Gaps = 32/202 (15%)
Query: 434 VAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANA 493
VAV+ + E GE+ E+ ++HPNIV+ + P ++ ++ S G L
Sbjct: 47 VAVKYI-ERGEKIAANVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFER 105
Query: 494 L--RGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPY 551
+ GR + + + G++Y C + H D+K N LLD P
Sbjct: 106 ICNAGRFSEDEARFFFQQLIS-------GVSY---CHAMQVCHRDLKLENTLLDGSPAPR 155
Query: 552 --ISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKW 609
I DFG S+ ++ + +P T T Y APE + +
Sbjct: 156 LKICDFGYSK-----------------SSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKVA 198
Query: 610 DVYSFGVVLLELLTGKSPELSP 631
DV+S GV L +L G P P
Sbjct: 199 DVWSCGVTLYVMLVGAYPFEDP 220
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 72/178 (40%), Gaps = 27/178 (15%)
Query: 451 VTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANAL-RGRNGQPSTSLSWST 509
VTE + + +HP + L+ + D + ++ + G L L R R + +
Sbjct: 53 VTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGA 112
Query: 510 RLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPS 569
+ L YLH R V+ DIK N++LD D I+DFGL + G +
Sbjct: 113 EI------VSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK----EGISDG 159
Query: 570 SSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
++ G Y+ P E + RA D + GVV+ E++ G+ P
Sbjct: 160 ATMKXFCGTPEYLAPEVLEDNDYGRAV-------------DWWGLGVVMYEMMCGRLP 204
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 75/167 (44%), Gaps = 27/167 (16%)
Query: 462 HPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLS-WSTRLRIAKGTARG 520
HP +V L + + + ++++ G+L ++ + P +S + +A
Sbjct: 80 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLA------ 133
Query: 521 LAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALP 580
L YLHE R ++ D+K N+LLD++ ++D+G+ + G P + G
Sbjct: 134 LNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCK----EGLRPGDTTSXFCG--- 183
Query: 581 YMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
T NY APE + G D ++ GV++ E++ G+SP
Sbjct: 184 ---------TPNYIAPEI-LRGEDYGFSVDWWALGVLMFEMMAGRSP 220
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 72/178 (40%), Gaps = 27/178 (15%)
Query: 451 VTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANAL-RGRNGQPSTSLSWST 509
VTE + + +HP + L+ + D + ++ + G L L R R + +
Sbjct: 56 VTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGA 115
Query: 510 RLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPS 569
+ L YLH R V+ DIK N++LD D I+DFGL + G +
Sbjct: 116 EI------VSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK----EGISDG 162
Query: 570 SSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
++ G Y+ P E + RA D + GVV+ E++ G+ P
Sbjct: 163 ATMKTFCGTPEYLAPEVLEDNDYGRAV-------------DWWGLGVVMYEMMCGRLP 207
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 72/178 (40%), Gaps = 27/178 (15%)
Query: 451 VTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANAL-RGRNGQPSTSLSWST 509
VTE + + +HP + L+ + D + ++ + G L L R R + +
Sbjct: 53 VTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGA 112
Query: 510 RLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPS 569
+ L YLH R V+ DIK N++LD D I+DFGL + G +
Sbjct: 113 EI------VSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK----EGISDG 159
Query: 570 SSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
++ G Y+ P E + RA D + GVV+ E++ G+ P
Sbjct: 160 ATMKTFCGTPEYLAPEVLEDNDYGRAV-------------DWWGLGVVMYEMMCGRLP 204
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 72/178 (40%), Gaps = 27/178 (15%)
Query: 451 VTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANAL-RGRNGQPSTSLSWST 509
VTE + + +HP + L+ + D + ++ + G L L R R + +
Sbjct: 53 VTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGA 112
Query: 510 RLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPS 569
+ L YLH R V+ DIK N++LD D I+DFGL + G +
Sbjct: 113 EI------VSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK----EGISDG 159
Query: 570 SSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
++ G Y+ P E + RA D + GVV+ E++ G+ P
Sbjct: 160 ATMKTFCGTPEYLAPEVLEDNDYGRAV-------------DWWGLGVVMYEMMCGRLP 204
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 101/238 (42%), Gaps = 34/238 (14%)
Query: 394 VAIDKGFTFELDELLRASAYVLGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHREFVT- 452
V + +G ++ ++L LG G+V++ V V V + + V
Sbjct: 42 VEVKQGSVYDYYDILEE----LGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKN 97
Query: 453 EVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLR 512
E+ + ++ HP ++ L + E +LI +F+S G L + + + + +S + +
Sbjct: 98 EISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYK----MSEAEVIN 153
Query: 513 IAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYIS--DFGLSRLINITGNNPSS 570
+ GL ++HE S VH DIKP NI+ + + DFGL+ T NP
Sbjct: 154 YMRQACEGLKHMHEHS---IVHLDIKPENIMCETKKASSVKIIDFGLA-----TKLNPDE 205
Query: 571 SGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKW-DVYSFGVVLLELLTGKSP 627
T T + APE + P+ + D+++ GV+ LL+G SP
Sbjct: 206 IVKV------------TTATAEFAAPE--IVDREPVGFYTDMWAIGVLGYVLLSGLSP 249
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 76/167 (45%), Gaps = 27/167 (16%)
Query: 462 HPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLS-WSTRLRIAKGTARG 520
HP +V L + + + ++++ G+L ++ + P +S + +A
Sbjct: 112 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLA------ 165
Query: 521 LAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALP 580
L YLHE R ++ D+K N+LLD++ ++D+G+ + G+ S+ G
Sbjct: 166 LNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCG------- 215
Query: 581 YMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
T NY APE + G D ++ GV++ E++ G+SP
Sbjct: 216 ---------TPNYIAPEI-LRGEDYGFSVDWWALGVLMFEMMAGRSP 252
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 75/167 (44%), Gaps = 27/167 (16%)
Query: 462 HPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLS-WSTRLRIAKGTARG 520
HP +V L + + + ++++ G+L ++ + P +S + +A
Sbjct: 65 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLA------ 118
Query: 521 LAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALP 580
L YLHE R ++ D+K N+LLD++ ++D+G+ + G P + G
Sbjct: 119 LNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCK----EGLRPGDTTSXFCG--- 168
Query: 581 YMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
T NY APE + G D ++ GV++ E++ G+SP
Sbjct: 169 ---------TPNYIAPEI-LRGEDYGFSVDWWALGVLMFEMMAGRSP 205
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 96/222 (43%), Gaps = 44/222 (19%)
Query: 415 LGKSGLGIV---YKVVLGNGIPVAVRRLGEGGE-QRH-REFVTEVQAIAKVKHPNIVKLR 469
+G GIV + VLG I VAV++L + Q H + E+ + V H NI+ L
Sbjct: 30 IGSGAQGIVCAAFDTVLG--INVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLL 87
Query: 470 AYYWAPDEKL-------LISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLA 522
+ P + L L+ + + + NL + S L G+
Sbjct: 88 NVF-TPQKTLEEFQDVYLVMELM-DANLCQVIHMELDHERMSYLLYQMLC-------GIK 138
Query: 523 YLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYM 582
+LH +H D+KPSNI++ +D I DFGL+R ++S FM PY+
Sbjct: 139 HLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---------TASTNFM--MTPYV 184
Query: 583 KPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTG 624
T YRAPE + G + D++S G ++ EL+ G
Sbjct: 185 ------VTRYYRAPEV-ILGMGYKENVDIWSVGCIMGELVKG 219
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 75/167 (44%), Gaps = 27/167 (16%)
Query: 462 HPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLS-WSTRLRIAKGTARG 520
HP +V L + + + ++++ G+L ++ + P +S + +A
Sbjct: 69 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLA------ 122
Query: 521 LAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALP 580
L YLHE R ++ D+K N+LLD++ ++D+G+ + G P + G
Sbjct: 123 LNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCK----EGLRPGDTTSXFCG--- 172
Query: 581 YMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
T NY APE + G D ++ GV++ E++ G+SP
Sbjct: 173 ---------TPNYIAPEI-LRGEDYGFSVDWWALGVLMFEMMAGRSP 209
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 86/218 (39%), Gaps = 25/218 (11%)
Query: 438 RLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGR 497
RL + E + E+ + ++KH NIV+L + D+KL + + +L
Sbjct: 36 RLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHS-DKKLTLVFEFCDQDLKKYFDSC 94
Query: 498 NGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGL 557
NG + S ++ KG L C R +H D+KP N+L++ + + ++DFGL
Sbjct: 95 NGDLDPEIVKSFLFQLLKG-------LGFCHSRNVLHRDLKPQNLLINRNGELKLADFGL 147
Query: 558 SRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVV 617
+R I S+ T YR P+ D++S G +
Sbjct: 148 ARAFGIPVRCYSAEVV----------------TLWYRPPDVLFGAKLYSTSIDMWSAGCI 191
Query: 618 LLELLTGKSPELSPTTSTSIEVPDLVRWVKKGFEEENP 655
EL P L P ++ + R + EE+ P
Sbjct: 192 FAELANAARP-LFPGNDVDDQLKRIFRLLGTPTEEQWP 228
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 94/222 (42%), Gaps = 16/222 (7%)
Query: 413 YVLGKSGLGIVYKVVLGNGIP-VAVRRLGEGGEQ--RHREFVTEVQAIAKVKHPNIVKLR 469
+++G+ G VY N VA++++ E + + E+ + ++K I++L
Sbjct: 34 HLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLH 93
Query: 470 AYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSP 529
P++ L + +A++ + + L+ I G ++HE
Sbjct: 94 DLI-IPEDLLKFDELYIVLEIADSDLKKLFKTPIFLTEQHVKTILYNLLLGEKFIHESG- 151
Query: 530 RKFVHGDIKPSNILLDNDFQPYISDFGLSRLIN----ITGNNPSSSGGFMGGALPYMKPV 585
+H D+KP+N LL+ D I DFGL+R IN I N P+ K +
Sbjct: 152 --IIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEKEENEEPGPHNKNL 209
Query: 586 QTEKTNN-----YRAPEARVPGNRPMQKWDVYSFGVVLLELL 622
+ + T++ YRAPE + D++S G + ELL
Sbjct: 210 KKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELL 251
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 76/187 (40%), Gaps = 39/187 (20%)
Query: 517 TARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMG 576
ARG+ +L S RK +H D+ NILL + I DFGL+R I NP
Sbjct: 208 VARGMEFL---SSRKCIHRDLAARNILLSENNVVKICDFGLARDIY---KNPD------- 254
Query: 577 GALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTST 635
Y++ T + APE+ + K DV+S+GV+L E+ + G SP P
Sbjct: 255 ----YVRKGDTRLPLKWMAPES-IFDKIYSTKSDVWSYGVLLWEIFSLGGSP--YPGVQM 307
Query: 636 SIEVPDLVRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRM 695
D +++G P + ++ + L C DP+ RPR
Sbjct: 308 D---EDFCSRLREGMRMRAP---------------EYSTPEIYQIMLDCWHRDPKERPRF 349
Query: 696 KNVSENL 702
+ E L
Sbjct: 350 AELVEKL 356
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 106/250 (42%), Gaps = 56/250 (22%)
Query: 408 LRASAYVLGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHREF----VTEVQAIAKVK-H 462
L S +LG G V G PVAV+R+ +F + E++ + + H
Sbjct: 16 LVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLI-------DFCDIALMEIKLLTESDDH 68
Query: 463 PNIVKLRAYYWA--PDEKLLISDFISNGNLANALRGRN-GQPSTSLSWSTR-LRIAKGTA 518
PN+++ YY + D L I+ + N NL + + +N + L + + + A
Sbjct: 69 PNVIR---YYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIA 125
Query: 519 RGLAYLHECSPRKFVHGDIKPSNILLDN-------------DFQPYISDFGLSRLIN--- 562
G+A+LH K +H D+KP NIL+ + + ISDFGL + ++
Sbjct: 126 SGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQ 182
Query: 563 ----ITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVL 618
NNPS + G+ P E++NN + R + D++S G V
Sbjct: 183 SSFRTNLNNPSGTSGWRA-------PELLEESNNLQTKR------RLTRSIDIFSMGCVF 229
Query: 619 LELLT-GKSP 627
+L+ GK P
Sbjct: 230 YYILSKGKHP 239
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 80/171 (46%), Gaps = 33/171 (19%)
Query: 461 KHPNIVKLRAYYWAPDEKLLISDFISNGNLANALR--GRNGQPSTSLSWSTRLRIAKGTA 518
K P + +L + + D + ++++ G+L ++ G+ +P ++ ++ + I
Sbjct: 78 KPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQ-AVFYAAEISI----- 131
Query: 519 RGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGA 578
GL +LH+ R ++ D+K N++LD++ I+DFG+ + + G G
Sbjct: 132 -GLFFLHK---RGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTREFCG----- 182
Query: 579 LPYMKPVQTEKTNNYRAPE--ARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
T +Y APE A P + + W ++GV+L E+L G+ P
Sbjct: 183 -----------TPDYIAPEIIAYQPYGKSVDWW---AYGVLLYEMLAGQPP 219
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 95/233 (40%), Gaps = 48/233 (20%)
Query: 415 LGKSGLGIVYKVVLGN-GIPVAVRRLGEGGEQRHRE-FVTEVQAIAKVKHPNIVKLRAY- 471
LG G G V + + + G VA+++ + ++RE + E+Q + K+ HPN+V R
Sbjct: 22 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVP 81
Query: 472 ----YWAP-DEKLLISDFISNGNLANALRG-------RNGQPSTSLSWSTRLRIAKGTAR 519
AP D LL ++ G+L L + G T LS +
Sbjct: 82 DGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLS---------DISS 132
Query: 520 GLAYLHECSPRKFVHGDIKPSNILLDNDFQPYIS---DFGLSRLINITGNNPSSSGGFMG 576
L YLHE + +H D+KP NI+L Q I D G ++ + + F+G
Sbjct: 133 ALRYLHE---NRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL----DQGELCTEFVG 185
Query: 577 GALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPEL 629
T Y APE + + D +SFG + E +TG P L
Sbjct: 186 -------------TLQYLAPEL-LEQKKYTVTVDYWSFGTLAFECITGFRPFL 224
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 95/233 (40%), Gaps = 48/233 (20%)
Query: 415 LGKSGLGIVYKVVLGN-GIPVAVRRLGEGGEQRHRE-FVTEVQAIAKVKHPNIVKLRAY- 471
LG G G V + + + G VA+++ + ++RE + E+Q + K+ HPN+V R
Sbjct: 23 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVP 82
Query: 472 ----YWAP-DEKLLISDFISNGNLANALRG-------RNGQPSTSLSWSTRLRIAKGTAR 519
AP D LL ++ G+L L + G T LS +
Sbjct: 83 DGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLS---------DISS 133
Query: 520 GLAYLHECSPRKFVHGDIKPSNILLDNDFQPYIS---DFGLSRLINITGNNPSSSGGFMG 576
L YLHE + +H D+KP NI+L Q I D G ++ + + F+G
Sbjct: 134 ALRYLHE---NRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL----DQGELCTEFVG 186
Query: 577 GALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPEL 629
T Y APE + + D +SFG + E +TG P L
Sbjct: 187 -------------TLQYLAPEL-LEQKKYTVTVDYWSFGTLAFECITGFRPFL 225
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 106/250 (42%), Gaps = 56/250 (22%)
Query: 408 LRASAYVLGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHREF----VTEVQAIAKVK-H 462
L S +LG G V G PVAV+R+ +F + E++ + + H
Sbjct: 16 LVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLI-------DFCDIALMEIKLLTESDDH 68
Query: 463 PNIVKLRAYYWA--PDEKLLISDFISNGNLANALRGRN-GQPSTSLSWSTR-LRIAKGTA 518
PN+++ YY + D L I+ + N NL + + +N + L + + + A
Sbjct: 69 PNVIR---YYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIA 125
Query: 519 RGLAYLHECSPRKFVHGDIKPSNILLDN-------------DFQPYISDFGLSRLIN--- 562
G+A+LH K +H D+KP NIL+ + + ISDFGL + ++
Sbjct: 126 SGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQ 182
Query: 563 ----ITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVL 618
NNPS + G+ P E++NN + R + D++S G V
Sbjct: 183 XXFRXNLNNPSGTSGWRA-------PELLEESNNLQTKR------RLTRSIDIFSMGCVF 229
Query: 619 LELLT-GKSP 627
+L+ GK P
Sbjct: 230 YYILSKGKHP 239
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 102/259 (39%), Gaps = 54/259 (20%)
Query: 414 VLGKSGLGIVYKVVLGNGIP---VAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRA 470
VLG+ G V K N + A++++ E++ ++EV +A + H +V+
Sbjct: 13 VLGQGAFGQVVKA--RNALDSRYYAIKKI-RHTEEKLSTILSEVMLLASLNHQYVVR--- 66
Query: 471 YYWAPDEK---------------LLIS-DFISNGNLANALRGRNGQPSTSLSWSTRLRIA 514
YY A E+ L I ++ N L + + N W R+
Sbjct: 67 YYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYW----RLF 122
Query: 515 KGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSR-------LINITGNN 567
+ L+Y+H + +H D+KP NI +D I DFGL++ ++ + N
Sbjct: 123 RQILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQN 179
Query: 568 PSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELL----T 623
S + A+ T Y A E +K D+YS G++ E++ T
Sbjct: 180 LPGSSDNLTSAIG---------TAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYPFST 230
Query: 624 G--KSPELSPTTSTSIEVP 640
G + L S SIE P
Sbjct: 231 GMERVNILKKLRSVSIEFP 249
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 86/215 (40%), Gaps = 27/215 (12%)
Query: 414 VLGKSGLGIVYKVV-LGNGIPVAVRRLGEGGEQRHREFVT--EVQAIAKVKHPNIVKLRA 470
++G+ G+V K G VA+++ E + + + + E++ + +++H N+V L
Sbjct: 32 LVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLE 91
Query: 471 YYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPR 530
L+ +F+ + L + NG L + + G+ + C
Sbjct: 92 VCKKKKRWYLVFEFVDHTILDDLELFPNG-----LDYQVVQKYLFQIINGIGF---CHSH 143
Query: 531 KFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKT 590
+H DIKP NIL+ + DFG +R + G T
Sbjct: 144 NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVA----------------T 187
Query: 591 NNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGK 625
YRAPE V + + DV++ G ++ E+ G+
Sbjct: 188 RWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGE 222
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 64/175 (36%), Gaps = 25/175 (14%)
Query: 453 EVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLR 512
E+ + H ++V ++ D ++ + +L + R + R
Sbjct: 67 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR-- 124
Query: 513 IAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSG 572
G YLH + +H D+K N+ L+ D + I DFGL+ + G +
Sbjct: 125 ---QIVLGCQYLHR---NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLC 178
Query: 573 GFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
G T NY APE + DV+S G ++ LL GK P
Sbjct: 179 G----------------TPNYIAPEVLSKKGHSFE-VDVWSIGCIMYTLLVGKPP 216
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 64/175 (36%), Gaps = 25/175 (14%)
Query: 453 EVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLR 512
E+ + H ++V ++ D ++ + +L + R + R
Sbjct: 67 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR-- 124
Query: 513 IAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSG 572
G YLH + +H D+K N+ L+ D + I DFGL+ + G +
Sbjct: 125 ---QIVLGCQYLHR---NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLC 178
Query: 573 GFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
G T NY APE + DV+S G ++ LL GK P
Sbjct: 179 G----------------TPNYIAPEVLSKKGHSFE-VDVWSIGCIMYTLLVGKPP 216
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 82/205 (40%), Gaps = 29/205 (14%)
Query: 451 VTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANAL--RGRNGQPSTSLSWS 508
+ E Q + KV +V L Y D L+ ++ G+L + G+ G P +
Sbjct: 232 LNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVF- 290
Query: 509 TRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNP 568
A GL LH + V+ D+KP NILLD+ ISD GL+ + G
Sbjct: 291 ----YAAEICCGLEDLHR---ERIVYRDLKPENILLDDHGHIRISDLGLAVHVP-EGQTI 342
Query: 569 SSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP- 627
G +G Y APE V R D ++ G +L E++ G+SP
Sbjct: 343 KGRVGTVG----------------YMAPEV-VKNERYTFSPDWWALGCLLYEMIAGQSPF 385
Query: 628 ELSPTTSTSIEVPDLVRWVKKGFEE 652
+ EV LV+ V + + E
Sbjct: 386 QQRKKKIKREEVERLVKEVPEEYSE 410
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 53/105 (50%), Gaps = 21/105 (20%)
Query: 520 GLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGAL 579
G+ +LH +H D+KPSNI++ +D I DFGL+R ++ FM
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR---------TAGTSFM--MT 183
Query: 580 PYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTG 624
PY+ T YRAPE + G + D++S GV++ E++ G
Sbjct: 184 PYV------VTRYYRAPEV-ILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 64/175 (36%), Gaps = 25/175 (14%)
Query: 453 EVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLR 512
E+ + H ++V ++ D ++ + +L + R + R
Sbjct: 71 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR-- 128
Query: 513 IAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSG 572
G YLH + +H D+K N+ L+ D + I DFGL+ + G +
Sbjct: 129 ---QIVLGCQYLHR---NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLC 182
Query: 573 GFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
G T NY APE + DV+S G ++ LL GK P
Sbjct: 183 G----------------TPNYIAPEVLSKKGHSFE-VDVWSIGCIMYTLLVGKPP 220
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 53/105 (50%), Gaps = 21/105 (20%)
Query: 520 GLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGAL 579
G+ +LH +H D+KPSNI++ +D I DFGL+R ++ FM
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR---------TAGTSFM--MT 183
Query: 580 PYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTG 624
PY+ T YRAPE + G + D++S GV++ E++ G
Sbjct: 184 PYV------VTRYYRAPEV-ILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 77/186 (41%), Gaps = 32/186 (17%)
Query: 447 HREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLS 506
H++ E + +KHPNIV+L L+ D ++ G L + R S
Sbjct: 74 HQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADAS 133
Query: 507 WSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQ---PYISDFGLSRLINI 563
+ ++H+ VH D+KP N+LL + + ++DFGL+ I +
Sbjct: 134 -----HCIHQILESVNHIHQ---HDIVHRDLKPENLLLASKCKGAAVKLADFGLA--IEV 183
Query: 564 TGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEA--RVPGNRPMQKWDVYSFGVVLLEL 621
G + GF G T Y +PE + P +P+ D+++ GV+L L
Sbjct: 184 QGEQ-QAWFGFAG-------------TPGYLSPEVLRKDPYGKPV---DIWACGVILYIL 226
Query: 622 LTGKSP 627
L G P
Sbjct: 227 LVGYPP 232
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 79/202 (39%), Gaps = 32/202 (15%)
Query: 434 VAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANA 493
VAV+ + E GE+ E+ ++HPNIV+ + P ++ ++ S G L
Sbjct: 47 VAVKYI-ERGEKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFER 105
Query: 494 L--RGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPY 551
+ GR + + + G++Y C + H D+K N LLD P
Sbjct: 106 ICNAGRFSEDEARFFFQQLI-------SGVSY---CHAMQVCHRDLKLENTLLDGSPAPR 155
Query: 552 --ISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKW 609
I FG S+ ++ + +P T T Y APE + +
Sbjct: 156 LKICAFGYSK-----------------SSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKVA 198
Query: 610 DVYSFGVVLLELLTGKSPELSP 631
DV+S GV L +L G P P
Sbjct: 199 DVWSCGVTLYVMLVGAYPFEDP 220
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 79/202 (39%), Gaps = 32/202 (15%)
Query: 434 VAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANA 493
VAV+ + E GE+ E+ ++HPNIV+ + P ++ ++ S G L
Sbjct: 47 VAVKYI-ERGEKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFER 105
Query: 494 L--RGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPY 551
+ GR + + + G++Y C + H D+K N LLD P
Sbjct: 106 ICNAGRFSEDEARFFFQQLI-------SGVSY---CHAMQVCHRDLKLENTLLDGSPAPR 155
Query: 552 --ISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKW 609
I FG S+ ++ + +P T T Y APE + +
Sbjct: 156 LKICAFGYSK-----------------SSVLHSQPKDTVGTPAYIAPEVLLKKEYDGKVA 198
Query: 610 DVYSFGVVLLELLTGKSPELSP 631
DV+S GV L +L G P P
Sbjct: 199 DVWSCGVTLYVMLVGAYPFEDP 220
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 79/182 (43%), Gaps = 28/182 (15%)
Query: 452 TEVQAIAKVKHPNIVKLRAY------YWAPDEKLLISDFISNGNLANALRGRNGQPSTSL 505
TE+ ++H NI+ A W + LI+D+ NG+L + L+ ST+L
Sbjct: 80 TEIYQTVLMRHENILGFIAADIKGTGSWT--QLYLITDYHENGSLYDYLK------STTL 131
Query: 506 SWSTRLRIAKGTARGLAYLH------ECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSR 559
+ L++A + GL +LH + P H D+K NIL+ + I+D GL+
Sbjct: 132 DAKSMLKLAYSSVSGLCHLHTEIFSTQGKP-AIAHRDLKSKNILVKKNGTCCIADLGLAV 190
Query: 560 LINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLL 619
N G YM P +++ N ++ + D+YSFG++L
Sbjct: 191 KFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMA-------DMYSFGLILW 243
Query: 620 EL 621
E+
Sbjct: 244 EV 245
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 82/205 (40%), Gaps = 29/205 (14%)
Query: 451 VTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANAL--RGRNGQPSTSLSWS 508
+ E Q + KV +V L Y D L+ ++ G+L + G+ G P +
Sbjct: 232 LNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVF- 290
Query: 509 TRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNP 568
A GL LH + V+ D+KP NILLD+ ISD GL+ + G
Sbjct: 291 ----YAAEICCGLEDLHR---ERIVYRDLKPENILLDDHGHIRISDLGLAVHVP-EGQTI 342
Query: 569 SSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP- 627
G +G Y APE V R D ++ G +L E++ G+SP
Sbjct: 343 KGRVGTVG----------------YMAPEV-VKNERYTFSPDWWALGCLLYEMIAGQSPF 385
Query: 628 ELSPTTSTSIEVPDLVRWVKKGFEE 652
+ EV LV+ V + + E
Sbjct: 386 QQRKKKIKREEVERLVKEVPEEYSE 410
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 96/219 (43%), Gaps = 13/219 (5%)
Query: 413 YVLGKSGLGIVYKVVLGNGIP-VAVRRLGEGGEQ--RHREFVTEVQAIAKVKHPNIVKLR 469
+++G+ G VY N VA++++ E + + E+ + ++K I++L
Sbjct: 32 HLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLY 91
Query: 470 AYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSP 529
PD+ L + +A++ + + L+ I G ++HE
Sbjct: 92 DLI-IPDDLLKFDELYIVLEIADSDLKKLFKTPIFLTEEHIKTILYNLLLGENFIHESG- 149
Query: 530 RKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGN-NPSSSGGFMGGALPYMKPVQTE 588
+H D+KP+N LL+ D + DFGL+R IN + N + P+ K ++ +
Sbjct: 150 --IIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQ 207
Query: 589 KTNN-----YRAPEARVPGNRPMQKWDVYSFGVVLLELL 622
T++ YRAPE + + D++S G + ELL
Sbjct: 208 LTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELL 246
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 94/222 (42%), Gaps = 44/222 (19%)
Query: 415 LGKSGLGIV---YKVVLGNGIPVAVRRLGEGGE-QRH-REFVTEVQAIAKVKHPNIVKLR 469
+G GIV + VLG I VAV++L + Q H + E+ + V H NI+ L
Sbjct: 32 IGSGAQGIVCAAFDTVLG--INVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLL 89
Query: 470 AYYWAPDEKL-------LISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLA 522
+ P + L L+ + + + NL + S L G+
Sbjct: 90 NVF-TPQKTLEEFQDVYLVMELM-DANLCQVIHMELDHERMSYLLYQMLC-------GIK 140
Query: 523 YLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYM 582
+LH +H D+KPSNI++ +D I DFGL+R ++ FM PY+
Sbjct: 141 HLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---------TACTNFM--MTPYV 186
Query: 583 KPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTG 624
T YRAPE + G D++S G ++ EL+ G
Sbjct: 187 ------VTRYYRAPEV-ILGMGYAANVDIWSVGCIMGELVKG 221
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 78/175 (44%), Gaps = 32/175 (18%)
Query: 460 VKHPNIVKLRAYYWAPDEKLLISDFISNGNLANAL--RGRNGQPSTSLSWSTRLRIAKGT 517
+KHP+IV+L Y + ++ +F+ +L + R G + S +R
Sbjct: 83 LKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMR----- 137
Query: 518 ARGLAYLHECSPRKFVHGDIKPSNILL---DNDFQPYISDFGLSRLINITGNNPSSSGGF 574
+ L L C +H D+KP N+LL +N + DFG++ + G + +GG
Sbjct: 138 -QILEALRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQL---GESGLVAGGR 193
Query: 575 MGGALPYMKPVQTEKTNNYRAPEA--RVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
+G T ++ APE R P +P+ DV+ GV+L LL+G P
Sbjct: 194 VG-------------TPHFMAPEVVKREPYGKPV---DVWGCGVILFILLSGCLP 232
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 63/175 (36%), Gaps = 25/175 (14%)
Query: 453 EVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLR 512
E+ + H ++V ++ D ++ + +L + R + R
Sbjct: 65 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR-- 122
Query: 513 IAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSG 572
G YLH + +H D+K N+ L+ D + I DFGL+ + G
Sbjct: 123 ---QIVLGCQYLHR---NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLC 176
Query: 573 GFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
G T NY APE + DV+S G ++ LL GK P
Sbjct: 177 G----------------TPNYIAPEVLSKKGHSFE-VDVWSIGCIMYTLLVGKPP 214
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 87/206 (42%), Gaps = 35/206 (16%)
Query: 429 GNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWAP--DEKLLISDFIS 486
GN I V V ++ + ++ R+F E + HPN++ + +P LI+ ++
Sbjct: 33 GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMP 92
Query: 487 NGNLANALR-GRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLD 545
G+L N L G N + S ++ A ARG+A+LH P H + ++++D
Sbjct: 93 YGSLYNVLHEGTN----FVVDQSQAVKFALDMARGMAFLHTLEPLIPRHA-LNSRSVMID 147
Query: 546 NDFQPYIS--DFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEA--RVP 601
D IS D S S G A + APEA + P
Sbjct: 148 EDMTARISMADVKFSF---------QSPGRMYAPA--------------WVAPEALQKKP 184
Query: 602 GNRPMQKWDVYSFGVVLLELLTGKSP 627
+ + D++SF V+L EL+T + P
Sbjct: 185 EDTNRRSADMWSFAVLLWELVTREVP 210
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 71/167 (42%), Gaps = 27/167 (16%)
Query: 462 HPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGL 521
HP + +L + PD + +F++ G+L + Q S + A L
Sbjct: 83 HPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHI-----QKSRRFDEARARFYAAEIISAL 137
Query: 522 AYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPY 581
+LH+ + ++ D+K N+LLD++ ++DFG+ + G ++ G
Sbjct: 138 MFLHD---KGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCG-------- 186
Query: 582 MKPVQTEKTNNYRAPEA-RVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
T +Y APE + P W ++ GV+L E+L G +P
Sbjct: 187 --------TPDYIAPEILQEMLYGPAVDW--WAMGVLLYEMLCGHAP 223
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 90/221 (40%), Gaps = 33/221 (14%)
Query: 415 LGKSGLGIVYKVV---LGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKH-PNIVKLRA 470
LG+ +V + + G + G+ E + E+ + K P ++ L
Sbjct: 37 LGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHE 96
Query: 471 YYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPR 530
Y E +LI ++ + G + + + + +S + +R+ K G+ YLH+
Sbjct: 97 VYENTSEIILILEYAAGGEIFSLCLP---ELAEMVSENDVIRLIKQILEGVYYLHQ---N 150
Query: 531 KFVHGDIKPSNILLDNDF---QPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQT 587
VH D+KP NILL + + I DFG+SR I + MG
Sbjct: 151 NIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKI----GHACELREIMG----------- 195
Query: 588 EKTNNYRAPEARVPGNRPMQK-WDVYSFGVVLLELLTGKSP 627
T Y APE + P+ D+++ G++ LLT SP
Sbjct: 196 --TPEYLAPE--ILNYDPITTATDMWNIGIIAYMLLTHTSP 232
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 78/157 (49%), Gaps = 19/157 (12%)
Query: 395 AIDKGFTFELDELLRASAYVLGKSGLGIVYKVVLG-NGIPVAVRRLGE--GGEQRHREFV 451
A+ +T E EL + +G G V+K V +G A++R + G + +
Sbjct: 2 AMKSRYTTEFHELEK-----IGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNAL 56
Query: 452 TEVQAIAKV-KHPNIVKLRAYY--WAPDEKLLI-SDFISNGNLANALRGRNGQPSTSLSW 507
EV A A + +H ++V+ Y+ WA D+ +LI +++ + G+LA+A+ N + +
Sbjct: 57 REVYAHAVLGQHSHVVR---YFSAWAEDDHMLIQNEYCNGGSLADAI-SENYRIMSYFKE 112
Query: 508 STRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILL 544
+ + RGL Y+H S VH DIKPSNI +
Sbjct: 113 AELKDLLLQVGRGLRYIHSMS---LVHMDIKPSNIFI 146
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 63/175 (36%), Gaps = 25/175 (14%)
Query: 453 EVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLR 512
E+ + H ++V ++ D ++ + +L + R + R
Sbjct: 89 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR-- 146
Query: 513 IAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSG 572
G YLH + +H D+K N+ L+ D + I DFGL+ + G
Sbjct: 147 ---QIVLGCQYLHR---NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLC 200
Query: 573 GFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
G T NY APE + DV+S G ++ LL GK P
Sbjct: 201 G----------------TPNYIAPEVLSKKGHSFE-VDVWSIGCIMYTLLVGKPP 238
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 63/175 (36%), Gaps = 25/175 (14%)
Query: 453 EVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLR 512
E+ + H ++V ++ D ++ + +L + R + R
Sbjct: 91 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR-- 148
Query: 513 IAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSG 572
G YLH + +H D+K N+ L+ D + I DFGL+ + G
Sbjct: 149 ---QIVLGCQYLHR---NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLC 202
Query: 573 GFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
G T NY APE + DV+S G ++ LL GK P
Sbjct: 203 G----------------TPNYIAPEVLSKKGHSFE-VDVWSIGCIMYTLLVGKPP 240
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 89/221 (40%), Gaps = 35/221 (15%)
Query: 415 LGKSGLGIVYKVV---LGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAY 471
+GK +V + V G+ + + + H++ E + +KH NIV+L
Sbjct: 12 IGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHSNIVRLHDS 71
Query: 472 YWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRK 531
L+ D ++ G L + R S + + A LH C
Sbjct: 72 ISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILE-------AVLH-CHQMG 123
Query: 532 FVHGDIKPSNILLDNDFQ---PYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTE 588
VH D+KP N+LL + + ++DFGL+ I + G+ + GF G
Sbjct: 124 VVHRDLKPENLLLASKCKGAAVKLADFGLA--IEVQGDQ-QAWFGFAG------------ 168
Query: 589 KTNNYRAPEA--RVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
T Y +PE + +P+ D+++ GV+L LL G P
Sbjct: 169 -TPGYLSPEVLRKEAYGKPV---DIWACGVILYILLVGYPP 205
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 86/218 (39%), Gaps = 25/218 (11%)
Query: 438 RLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGR 497
RL + E + E+ + ++KH NIV+L + D+KL + + +L
Sbjct: 36 RLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHS-DKKLTLVFEFCDQDLKKYFDSC 94
Query: 498 NGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGL 557
NG + S ++ KG L C R +H D+KP N+L++ + + +++FGL
Sbjct: 95 NGDLDPEIVKSFLFQLLKG-------LGFCHSRNVLHRDLKPQNLLINRNGELKLANFGL 147
Query: 558 SRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVV 617
+R I S+ T YR P+ D++S G +
Sbjct: 148 ARAFGIPVRCYSAEV----------------VTLWYRPPDVLFGAKLYSTSIDMWSAGCI 191
Query: 618 LLELLTGKSPELSPTTSTSIEVPDLVRWVKKGFEEENP 655
EL P L P ++ + R + EE+ P
Sbjct: 192 FAELANAGRP-LFPGNDVDDQLKRIFRLLGTPTEEQWP 228
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 87/192 (45%), Gaps = 24/192 (12%)
Query: 443 GEQRHREFVTEVQAIAKVK-HPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQP 501
G R R F EV+ + + + H N+++L ++ D L+ + + G++ + + R
Sbjct: 51 GHIRSRVF-REVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFN 109
Query: 502 STSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLD--NDFQPY-ISDFGLS 558
S + + A L +LH + H D+KP NIL + N P I DFGL
Sbjct: 110 ELEAS-----VVVQDVASALDFLHN---KGIAHRDLKPENILCEHPNQVSPVKICDFGLG 161
Query: 559 RLINITGN-NPSSSGGFMG--GALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFG 615
I + G+ +P S+ + G+ YM P E + EA + R D++S G
Sbjct: 162 SGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSE----EASIYDKR----CDLWSLG 213
Query: 616 VVLLELLTGKSP 627
V+L LL+G P
Sbjct: 214 VILYILLSGYPP 225
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 72/178 (40%), Gaps = 26/178 (14%)
Query: 451 VTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANAL-RGRNGQPSTSLSWST 509
+TE + + +HP + L+ + D + ++ + G L L R R + +
Sbjct: 56 LTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGA 115
Query: 510 RLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPS 569
+ L YLH S + V+ D+K N++LD D I+DFGL + G
Sbjct: 116 EI------VSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK----EGIKDG 163
Query: 570 SSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
++ G Y+ P E + RA D + GVV+ E++ G+ P
Sbjct: 164 ATMKXFCGTPEYLAPEVLEDNDYGRAV-------------DWWGLGVVMYEMMCGRLP 208
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 57/117 (48%), Gaps = 18/117 (15%)
Query: 512 RIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLS-RLINITGNNPSS 570
+IA + L +LH S +H D+KPSN+L++ Q + DFG+S L++ S
Sbjct: 157 KIAVSIVKALEHLH--SKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVD------SV 208
Query: 571 SGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
+ G PYM P E+ N PE G K D++S G+ ++EL + P
Sbjct: 209 AKTIDAGCKPYMAP---ERIN----PELNQKGYS--VKSDIWSLGITMIELAILRFP 256
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 52/114 (45%), Gaps = 14/114 (12%)
Query: 520 GLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSS------SGG 573
G+ Y+H +H D+KP+N L++ D + DFGL+R ++ N S
Sbjct: 168 GVKYVHSAG---ILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDD 224
Query: 574 FMGGALPYMKPVQTEKTNN-----YRAPEARVPGNRPMQKWDVYSFGVVLLELL 622
P+ K ++ + T + YRAPE + + DV+S G + ELL
Sbjct: 225 MNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELL 278
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 72/178 (40%), Gaps = 26/178 (14%)
Query: 451 VTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANAL-RGRNGQPSTSLSWST 509
+TE + + +HP + L+ + D + ++ + G L L R R + +
Sbjct: 57 LTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGA 116
Query: 510 RLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPS 569
+ L YLH S + V+ D+K N++LD D I+DFGL + G
Sbjct: 117 EI------VSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK----EGIKDG 164
Query: 570 SSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
++ G Y+ P E + RA D + GVV+ E++ G+ P
Sbjct: 165 ATMKXFCGTPEYLAPEVLEDNDYGRAV-------------DWWGLGVVMYEMMCGRLP 209
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 57/117 (48%), Gaps = 18/117 (15%)
Query: 512 RIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLS-RLINITGNNPSS 570
+IA + L +LH S +H D+KPSN+L++ Q + DFG+S L++ + +
Sbjct: 113 KIAVSIVKALEHLH--SKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDA 170
Query: 571 SGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
G PYM P E+ N PE G K D++S G+ ++EL + P
Sbjct: 171 ------GCKPYMAP---ERIN----PELNQKGYS--VKSDIWSLGITMIELAILRFP 212
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 72/178 (40%), Gaps = 26/178 (14%)
Query: 451 VTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANAL-RGRNGQPSTSLSWST 509
+TE + + +HP + L+ + D + ++ + G L L R R + +
Sbjct: 58 LTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGA 117
Query: 510 RLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPS 569
+ L YLH S + V+ D+K N++LD D I+DFGL + G
Sbjct: 118 EI------VSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK----EGIKDG 165
Query: 570 SSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
++ G Y+ P E + RA D + GVV+ E++ G+ P
Sbjct: 166 ATMKXFCGTPEYLAPEVLEDNDYGRAV-------------DWWGLGVVMYEMMCGRLP 210
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 73/210 (34%), Gaps = 45/210 (21%)
Query: 452 TEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLAN------------------- 492
TEV+ + K+ HPNI +L Y L+ + G+L +
Sbjct: 77 TEVRLMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVK 136
Query: 493 ------------ALRGRNGQPSTSLSWSTRLRIAKGTARGL-AYLHECSPRKFVHGDIKP 539
A+ G SL + R ++ R + + LH + H DIKP
Sbjct: 137 TQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKP 196
Query: 540 SNILLDND--FQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPE 597
N L + F+ + DFGLS+ N G ++ P TN P
Sbjct: 197 ENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGP- 255
Query: 598 ARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
K D +S GV+L LL G P
Sbjct: 256 ----------KCDAWSAGVLLHLLLMGAVP 275
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 72/178 (40%), Gaps = 26/178 (14%)
Query: 451 VTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANAL-RGRNGQPSTSLSWST 509
+TE + + +HP + L+ + D + ++ + G L L R R + +
Sbjct: 199 LTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGA 258
Query: 510 RLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPS 569
+ L YLH S + V+ D+K N++LD D I+DFGL + G
Sbjct: 259 EI------VSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK----EGIKDG 306
Query: 570 SSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
++ G Y+ P E + RA D + GVV+ E++ G+ P
Sbjct: 307 ATMKTFCGTPEYLAPEVLEDNDYGRAV-------------DWWGLGVVMYEMMCGRLP 351
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 75/176 (42%), Gaps = 23/176 (13%)
Query: 452 TEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRL 511
TE++A+ ++H +I +L ++ ++ ++ G L + + ++ LS
Sbjct: 57 TEIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQD-----RLSEEETR 111
Query: 512 RIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSS 571
+ + +AY+H + + H D+KP N+L D + + DFGL N
Sbjct: 112 VVFRQIVSAVAYVHS---QGYAHRDLKPENLLFDEYHKLKLIDFGLC---AKPKGNKDYH 165
Query: 572 GGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
G+L Y P + + +Y EA DV+S G++L L+ G P
Sbjct: 166 LQTCCGSLAYAAP-ELIQGKSYLGSEA-----------DVWSMGILLYVLMCGFLP 209
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 96/218 (44%), Gaps = 28/218 (12%)
Query: 415 LGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQR-HREFVTEVQAIAKVKHPNIVKLRAY-- 471
+GK G V++ G VAV+ E+ RE TE+ ++H NI+ A
Sbjct: 45 VGKGRYGEVWRGSW-QGENVAVKIFSSRDEKSWFRE--TELYNTVMLRHENILGFIASDM 101
Query: 472 --YWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLH---- 525
+ + LI+ + G+L + L+ T+L + LRI A GLA+LH
Sbjct: 102 TSRHSSTQLWLITHYHEMGSLYDYLQ------LTTLDTVSCLRIVLSIASGLAHLHIEIF 155
Query: 526 --ECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMK 583
+ P H D+K NIL+ + Q I+D GL+ + + + N G YM
Sbjct: 156 GTQGKP-AIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMA 214
Query: 584 PVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLEL 621
P ++T +V ++ D+++FG+VL E+
Sbjct: 215 PEVLDET-------IQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 72/178 (40%), Gaps = 26/178 (14%)
Query: 451 VTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANAL-RGRNGQPSTSLSWST 509
+TE + + +HP + L+ + D + ++ + G L L R R + +
Sbjct: 196 LTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGA 255
Query: 510 RLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPS 569
+ L YLH S + V+ D+K N++LD D I+DFGL + G
Sbjct: 256 EI------VSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK----EGIKDG 303
Query: 570 SSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
++ G Y+ P E + RA D + GVV+ E++ G+ P
Sbjct: 304 ATMKTFCGTPEYLAPEVLEDNDYGRAV-------------DWWGLGVVMYEMMCGRLP 348
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 76/152 (50%), Gaps = 19/152 (12%)
Query: 400 FTFELDELLRASAYVLGKSGLGIVYKVVLG-NGIPVAVRRLGE--GGEQRHREFVTEVQA 456
+T E EL + +G G V+K V +G A++R + G + + EV A
Sbjct: 7 YTTEFHELEK-----IGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYA 61
Query: 457 IAKV-KHPNIVKLRAYY--WAPDEKLLI-SDFISNGNLANALRGRNGQPSTSLSWSTRLR 512
A + +H ++V+ Y+ WA D+ +LI +++ + G+LA+A+ N + + +
Sbjct: 62 HAVLGQHSHVVR---YFSAWAEDDHMLIQNEYCNGGSLADAI-SENYRIMSYFKEAELKD 117
Query: 513 IAKGTARGLAYLHECSPRKFVHGDIKPSNILL 544
+ RGL Y+H S VH DIKPSNI +
Sbjct: 118 LLLQVGRGLRYIHSMS---LVHMDIKPSNIFI 146
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 79/171 (46%), Gaps = 33/171 (19%)
Query: 461 KHPNIVKLRAYYWAPDEKLLISDFISNGNLANALR--GRNGQPSTSLSWSTRLRIAKGTA 518
K P + +L + + D + ++++ G+L ++ GR +P A A
Sbjct: 79 KPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVF-------YAAEIA 131
Query: 519 RGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGA 578
GL +L + ++ D+K N++LD++ I+DFG+ + NI + ++ F G
Sbjct: 132 IGLFFLQS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKE-NIW--DGVTTKXFCG-- 183
Query: 579 LPYMKPVQTEKTNNYRAPE--ARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
T +Y APE A P + + W +FGV+L E+L G++P
Sbjct: 184 -----------TPDYIAPEIIAYQPYGKSVDWW---AFGVLLYEMLAGQAP 220
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 76/152 (50%), Gaps = 19/152 (12%)
Query: 400 FTFELDELLRASAYVLGKSGLGIVYKVVLG-NGIPVAVRRLGE--GGEQRHREFVTEVQA 456
+T E EL + +G G V+K V +G A++R + G + + EV A
Sbjct: 9 YTTEFHELEK-----IGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYA 63
Query: 457 IAKV-KHPNIVKLRAYY--WAPDEKLLI-SDFISNGNLANALRGRNGQPSTSLSWSTRLR 512
A + +H ++V+ Y+ WA D+ +LI +++ + G+LA+A+ N + + +
Sbjct: 64 HAVLGQHSHVVR---YFSAWAEDDHMLIQNEYCNGGSLADAI-SENYRIMSYFKEAELKD 119
Query: 513 IAKGTARGLAYLHECSPRKFVHGDIKPSNILL 544
+ RGL Y+H S VH DIKPSNI +
Sbjct: 120 LLLQVGRGLRYIHSMS---LVHMDIKPSNIFI 148
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 77/171 (45%), Gaps = 33/171 (19%)
Query: 461 KHPNIVKLRAYYWAPDEKLLISDFISNGNLANALR--GRNGQPSTSLSWSTRLRIAKGTA 518
K P + +L + + D + ++++ G+L ++ GR +P A A
Sbjct: 400 KPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVF-------YAAEIA 452
Query: 519 RGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGA 578
GL +L + ++ D+K N++LD++ I+DFG+ + G ++ F G
Sbjct: 453 IGLFFLQS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDG---VTTKXFCG-- 504
Query: 579 LPYMKPVQTEKTNNYRAPE--ARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
T +Y APE A P + + W +FGV+L E+L G++P
Sbjct: 505 -----------TPDYIAPEIIAYQPYGKSVDWW---AFGVLLYEMLAGQAP 541
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 76/152 (50%), Gaps = 19/152 (12%)
Query: 400 FTFELDELLRASAYVLGKSGLGIVYKVVLG-NGIPVAVRRLGE--GGEQRHREFVTEVQA 456
+T E EL + +G G V+K V +G A++R + G + + EV A
Sbjct: 5 YTTEFHELEK-----IGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYA 59
Query: 457 IAKV-KHPNIVKLRAYY--WAPDEKLLI-SDFISNGNLANALRGRNGQPSTSLSWSTRLR 512
A + +H ++V+ Y+ WA D+ +LI +++ + G+LA+A+ N + + +
Sbjct: 60 HAVLGQHSHVVR---YFSAWAEDDHMLIQNEYCNGGSLADAI-SENYRIMSYFKEAELKD 115
Query: 513 IAKGTARGLAYLHECSPRKFVHGDIKPSNILL 544
+ RGL Y+H S VH DIKPSNI +
Sbjct: 116 LLLQVGRGLRYIHSMS---LVHMDIKPSNIFI 144
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 74/171 (43%), Gaps = 29/171 (16%)
Query: 461 KHPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARG 520
+HPNI+ L+ Y L+++ + G L + + + S+ + +
Sbjct: 79 QHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASF-----VLHTIGKT 133
Query: 521 LAYLHECSPRKFVHGDIKPSNIL-LDNDFQP---YISDFGLSRLINITGNNPSSSGGFMG 576
+ YLH + VH D+KPSNIL +D P I DFG ++ + + G +
Sbjct: 134 VEYLHS---QGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLR-------AENGLL- 182
Query: 577 GALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
M P T N+ APE + + D++S G++L +L G +P
Sbjct: 183 -----MTPCYTA---NFVAPEV-LKRQGYDEGCDIWSLGILLYTMLAGYTP 224
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 94/223 (42%), Gaps = 44/223 (19%)
Query: 415 LGKSGLGIV---YKVVLGNGIPVAVRRLGEGGE-QRH-REFVTEVQAIAKVKHPNIVKLR 469
+G GIV Y VL VA+++L + Q H + E+ + V H NI+ L
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLL 89
Query: 470 AYYWAPDEKL-------LISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLA 522
+ P + L L+ + + + NL ++ S L G+
Sbjct: 90 NVF-TPQKTLEEFQDVYLVMELM-DANLXQVIQMELDHERMSYLLYQMLX-------GIK 140
Query: 523 YLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYM 582
+LH +H D+KPSNI++ +D I DFGL+R ++ FM PY+
Sbjct: 141 HLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR---------TAGTSFM--MTPYV 186
Query: 583 KPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGK 625
T YRAPE + G + D++S G ++ E++ K
Sbjct: 187 ------VTRYYRAPEV-ILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 96/218 (44%), Gaps = 28/218 (12%)
Query: 415 LGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQR-HREFVTEVQAIAKVKHPNIVKLRAY-- 471
+GK G V++ G VAV+ E+ RE TE+ ++H NI+ A
Sbjct: 16 VGKGRYGEVWRGSW-QGENVAVKIFSSRDEKSWFRE--TELYNTVMLRHENILGFIASDM 72
Query: 472 --YWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLH---- 525
+ + LI+ + G+L + L+ T+L + LRI A GLA+LH
Sbjct: 73 TSRHSSTQLWLITHYHEMGSLYDYLQ------LTTLDTVSCLRIVLSIASGLAHLHIEIF 126
Query: 526 --ECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMK 583
+ P H D+K NIL+ + Q I+D GL+ + + + N G YM
Sbjct: 127 GTQGKP-AIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMA 185
Query: 584 PVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLEL 621
P ++T +V ++ D+++FG+VL E+
Sbjct: 186 PEVLDET-------IQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 96/218 (44%), Gaps = 28/218 (12%)
Query: 415 LGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQR-HREFVTEVQAIAKVKHPNIVKLRAY-- 471
+GK G V++ G VAV+ E+ RE TE+ ++H NI+ A
Sbjct: 16 VGKGRYGEVWRGSW-QGENVAVKIFSSRDEKSWFRE--TELYNTVMLRHENILGFIASDM 72
Query: 472 --YWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLH---- 525
+ + LI+ + G+L + L+ T+L + LRI A GLA+LH
Sbjct: 73 TSRHSSTQLWLITHYHEMGSLYDYLQ------LTTLDTVSCLRIVLSIASGLAHLHIEIF 126
Query: 526 --ECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMK 583
+ P H D+K NIL+ + Q I+D GL+ + + + N G YM
Sbjct: 127 GTQGKP-AIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMA 185
Query: 584 PVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLEL 621
P ++T +V ++ D+++FG+VL E+
Sbjct: 186 PEVLDET-------IQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 52/105 (49%), Gaps = 21/105 (20%)
Query: 520 GLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGAL 579
G+ +LH +H D+KPSNI++ +D I DFGL+R ++ FM
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR---------TAGTSFM--MT 183
Query: 580 PYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTG 624
PY+ T YRAPE + G + D++S G ++ E++ G
Sbjct: 184 PYV------VTRYYRAPEV-ILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 52/105 (49%), Gaps = 21/105 (20%)
Query: 520 GLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGAL 579
G+ +LH +H D+KPSNI++ +D I DFGL+R ++ FM
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR---------TAGTSFM--MT 183
Query: 580 PYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTG 624
PY+ T YRAPE + G + D++S G ++ E++ G
Sbjct: 184 PYV------VTRYYRAPEV-ILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 52/105 (49%), Gaps = 21/105 (20%)
Query: 520 GLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGAL 579
G+ +LH +H D+KPSNI++ +D I DFGL+R ++ FM
Sbjct: 139 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---------TAGTSFM--MT 184
Query: 580 PYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTG 624
PY+ T YRAPE + G + D++S G ++ E++ G
Sbjct: 185 PYV------VTRYYRAPEV-ILGMGYKENVDIWSVGCIMGEMIKG 222
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 52/105 (49%), Gaps = 21/105 (20%)
Query: 520 GLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGAL 579
G+ +LH +H D+KPSNI++ +D I DFGL+R ++ FM
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---------TAGTSFM--MT 183
Query: 580 PYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTG 624
PY+ T YRAPE + G + D++S G ++ E++ G
Sbjct: 184 PYV------VTRYYRAPEV-ILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 74/171 (43%), Gaps = 29/171 (16%)
Query: 461 KHPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARG 520
+HPNI+ L+ Y L+++ + G L + + + S+ + +
Sbjct: 79 QHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASF-----VLHTIGKT 133
Query: 521 LAYLHECSPRKFVHGDIKPSNIL-LDNDFQP---YISDFGLSRLINITGNNPSSSGGFMG 576
+ YLH + VH D+KPSNIL +D P I DFG ++ + + G +
Sbjct: 134 VEYLHS---QGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLR-------AENGLL- 182
Query: 577 GALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
M P T N+ APE + + D++S G++L +L G +P
Sbjct: 183 -----MTPCYTA---NFVAPEV-LKRQGYDEGCDIWSLGILLYTMLAGYTP 224
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 89/222 (40%), Gaps = 33/222 (14%)
Query: 414 VLGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHRE----FVTEVQAIAKVKHPNIVKLR 469
V+G+ G V V + V +L E R F E +A P +V+L
Sbjct: 76 VIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQL- 134
Query: 470 AYYWAPDEKLL--ISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHEC 527
+Y D++ L + +++ G+L N + + + ++ + +A +
Sbjct: 135 -FYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMG----- 188
Query: 528 SPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKP--V 585
F+H D+KP N+LLD ++DFG +N G + G Y+ P +
Sbjct: 189 ----FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTA---VGTPDYISPEVL 241
Query: 586 QTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
+++ + Y E D +S GV L E+L G +P
Sbjct: 242 KSQGGDGYYGREC-----------DWWSVGVFLYEMLVGDTP 272
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 52/105 (49%), Gaps = 21/105 (20%)
Query: 520 GLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGAL 579
G+ +LH +H D+KPSNI++ +D I DFGL+R ++ FM
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---------TAGTSFM--MT 183
Query: 580 PYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTG 624
PY+ T YRAPE + G + D++S G ++ E++ G
Sbjct: 184 PYV------VTRYYRAPEV-ILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 52/105 (49%), Gaps = 21/105 (20%)
Query: 520 GLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGAL 579
G+ +LH +H D+KPSNI++ +D I DFGL+R ++ FM
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---------TAGTSFM--MT 183
Query: 580 PYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTG 624
PY+ T YRAPE + G + D++S G ++ E++ G
Sbjct: 184 PYV------VTRYYRAPEV-ILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 52/105 (49%), Gaps = 21/105 (20%)
Query: 520 GLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGAL 579
G+ +LH +H D+KPSNI++ +D I DFGL+R ++ FM
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR---------TAGTSFM--MT 183
Query: 580 PYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTG 624
PY+ T YRAPE + G + D++S G ++ E++ G
Sbjct: 184 PYV------VTRYYRAPEV-ILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 89/222 (40%), Gaps = 33/222 (14%)
Query: 414 VLGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHRE----FVTEVQAIAKVKHPNIVKLR 469
V+G+ G V V + V +L E R F E +A P +V+L
Sbjct: 81 VIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQL- 139
Query: 470 AYYWAPDEKLL--ISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHEC 527
+Y D++ L + +++ G+L N + + + ++ + +A +
Sbjct: 140 -FYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMG----- 193
Query: 528 SPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKP--V 585
F+H D+KP N+LLD ++DFG +N G + G Y+ P +
Sbjct: 194 ----FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTA---VGTPDYISPEVL 246
Query: 586 QTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
+++ + Y E D +S GV L E+L G +P
Sbjct: 247 KSQGGDGYYGREC-----------DWWSVGVFLYEMLVGDTP 277
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 89/222 (40%), Gaps = 33/222 (14%)
Query: 414 VLGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHRE----FVTEVQAIAKVKHPNIVKLR 469
V+G+ G V V + V +L E R F E +A P +V+L
Sbjct: 81 VIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQL- 139
Query: 470 AYYWAPDEKLL--ISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHEC 527
+Y D++ L + +++ G+L N + + + ++ + +A +
Sbjct: 140 -FYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMG----- 193
Query: 528 SPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKP--V 585
F+H D+KP N+LLD ++DFG +N G + G Y+ P +
Sbjct: 194 ----FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTA---VGTPDYISPEVL 246
Query: 586 QTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
+++ + Y E D +S GV L E+L G +P
Sbjct: 247 KSQGGDGYYGREC-----------DWWSVGVFLYEMLVGDTP 277
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 103/252 (40%), Gaps = 64/252 (25%)
Query: 408 LRASAYVLGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHREF----VTEVQAIAKVK-H 462
L S +LG G V G PVAV+R+ +F + E++ + + H
Sbjct: 34 LVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLI-------DFCDIALMEIKLLTESDDH 86
Query: 463 PNIVKLRAYYWA--PDEKLLISDFISNGNLANALRGRN-GQPSTSLSWSTR-LRIAKGTA 518
PN+++ YY + D L I+ + N NL + + +N + L + + + A
Sbjct: 87 PNVIR---YYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIA 143
Query: 519 RGLAYLHECSPRKFVHGDIKPSNILLDN-------------DFQPYISDFGLSRLIN--- 562
G+A+LH K +H D+KP NIL+ + + ISDFGL + ++
Sbjct: 144 SGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQ 200
Query: 563 ----ITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPE--ARVPGNRPMQKWDVYSFGV 616
NNPS + G +RAPE R + D++S G
Sbjct: 201 XXFRXNLNNPSGTSG-------------------WRAPELLEESTKRRLTRSIDIFSMGC 241
Query: 617 VLLELLT-GKSP 627
V +L+ GK P
Sbjct: 242 VFYYILSKGKHP 253
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 82/183 (44%), Gaps = 27/183 (14%)
Query: 453 EVQAIAKVKHPNIVKLRAYYWA-PDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRL 511
E+ + ++KHPN++ L+ + + D K+ + + +L + ++ + +
Sbjct: 68 EIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANK----KPV 123
Query: 512 RIAKGTARGLAY-----LHECSPRKFVHGDIKPSNILLDNDF----QPYISDFGLSRLIN 562
++ +G + L Y +H +H D+KP+NIL+ + + I+D G +RL N
Sbjct: 124 QLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFN 183
Query: 563 ITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELL 622
+P L + PV T YRAPE + + D+++ G + ELL
Sbjct: 184 ----SPLK-------PLADLDPVVV--TFWYRAPELLLGARHYTKAIDIWAIGCIFAELL 230
Query: 623 TGK 625
T +
Sbjct: 231 TSE 233
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 103/252 (40%), Gaps = 64/252 (25%)
Query: 408 LRASAYVLGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHREF----VTEVQAIAKVK-H 462
L S +LG G V G PVAV+R+ +F + E++ + + H
Sbjct: 34 LVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLI-------DFCDIALMEIKLLTESDDH 86
Query: 463 PNIVKLRAYYWA--PDEKLLISDFISNGNLANALRGRN-GQPSTSLSWSTR-LRIAKGTA 518
PN+++ YY + D L I+ + N NL + + +N + L + + + A
Sbjct: 87 PNVIR---YYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIA 143
Query: 519 RGLAYLHECSPRKFVHGDIKPSNILLDN-------------DFQPYISDFGLSRLIN--- 562
G+A+LH K +H D+KP NIL+ + + ISDFGL + ++
Sbjct: 144 SGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQ 200
Query: 563 ----ITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPE--ARVPGNRPMQKWDVYSFGV 616
NNPS + G +RAPE R + D++S G
Sbjct: 201 XXFRXNLNNPSGTSG-------------------WRAPELLEESTKRRLTRSIDIFSMGC 241
Query: 617 VLLELLT-GKSP 627
V +L+ GK P
Sbjct: 242 VFYYILSKGKHP 253
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 53/105 (50%), Gaps = 21/105 (20%)
Query: 520 GLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGAL 579
G+ +LH +H D+KPSNI++ +D I DFGL+R ++ FM +
Sbjct: 140 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---------TAGTSFM--MV 185
Query: 580 PYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTG 624
P++ T YRAPE + G + D++S G ++ E++ G
Sbjct: 186 PFV------VTRYYRAPEV-ILGMGYKENVDIWSVGCIMGEMIKG 223
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 94/223 (42%), Gaps = 44/223 (19%)
Query: 415 LGKSGLGIV---YKVVLGNGIPVAVRRLGEGGE-QRH-REFVTEVQAIAKVKHPNIVKLR 469
+G GIV Y VL VA+++L + Q H + E+ + V H NI+ L
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLL 89
Query: 470 AYYWAPDEKL-------LISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLA 522
+ P + L L+ + + + NL ++ S L G+
Sbjct: 90 NVF-TPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSYLLYQMLC-------GIK 140
Query: 523 YLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYM 582
+LH +H D+KPSNI++ +D I DFGL+R ++ FM PY+
Sbjct: 141 HLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR---------TAGTSFM--MTPYV 186
Query: 583 KPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGK 625
T YRAPE + G + D++S G ++ E++ K
Sbjct: 187 ------VTRYYRAPEV-ILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 94/223 (42%), Gaps = 44/223 (19%)
Query: 415 LGKSGLGIV---YKVVLGNGIPVAVRRLGEGGE-QRH-REFVTEVQAIAKVKHPNIVKLR 469
+G GIV Y VL VA+++L + Q H + E+ + V H NI+ L
Sbjct: 70 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 127
Query: 470 AYYWAPDEKL-------LISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLA 522
+ P + L L+ + + + NL ++ S L G+
Sbjct: 128 NVF-TPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSYLLYQMLC-------GIK 178
Query: 523 YLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYM 582
+LH +H D+KPSNI++ +D I DFGL+R ++ FM PY+
Sbjct: 179 HLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---------TAGTSFM--MTPYV 224
Query: 583 KPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGK 625
T YRAPE + G + D++S G ++ E++ K
Sbjct: 225 ------VTRYYRAPEV-ILGMGYKENVDIWSVGCIMGEMVRHK 260
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 94/223 (42%), Gaps = 44/223 (19%)
Query: 415 LGKSGLGIV---YKVVLGNGIPVAVRRLGEGGE-QRH-REFVTEVQAIAKVKHPNIVKLR 469
+G GIV Y VL VA+++L + Q H + E+ + V H NI+ L
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 89
Query: 470 AYYWAPDEKL-------LISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLA 522
+ P + L L+ + + + NL ++ S L G+
Sbjct: 90 NVF-TPQKTLEEFQDVYLVMELM-DANLXQVIQMELDHERMSYLLYQMLX-------GIK 140
Query: 523 YLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYM 582
+LH +H D+KPSNI++ +D I DFGL+R ++ FM PY+
Sbjct: 141 HLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR---------TAGTSFM--MTPYV 186
Query: 583 KPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGK 625
T YRAPE + G + D++S G ++ E++ K
Sbjct: 187 ------VTRYYRAPEV-ILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 94/223 (42%), Gaps = 44/223 (19%)
Query: 415 LGKSGLGIV---YKVVLGNGIPVAVRRLGEGGE-QRH-REFVTEVQAIAKVKHPNIVKLR 469
+G GIV Y VL VA+++L + Q H + E+ + V H NI+ L
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLL 89
Query: 470 AYYWAPDEKL-------LISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLA 522
+ P + L L+ + + + NL ++ S L G+
Sbjct: 90 NVF-TPQKTLEEFQDVYLVMELM-DANLXQVIQMELDHERMSYLLYQMLC-------GIK 140
Query: 523 YLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYM 582
+LH +H D+KPSNI++ +D I DFGL+R ++ FM PY+
Sbjct: 141 HLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR---------TAGTSFM--MTPYV 186
Query: 583 KPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGK 625
T YRAPE + G + D++S G ++ E++ K
Sbjct: 187 ------VTRYYRAPEV-ILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 84/200 (42%), Gaps = 42/200 (21%)
Query: 437 RRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYY--WAPDEK-----LLISDFISNGN 489
R+L + QR +E E + + ++HPNIV+ +Y W K +L+++ ++G
Sbjct: 62 RKLTKSERQRFKE---EAEXLKGLQHPNIVR---FYDSWESTVKGKKCIVLVTELXTSGT 115
Query: 490 LANAL-RGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDF 548
L L R + + SW ++ +GL +LH +P +H D+K NI +
Sbjct: 116 LKTYLKRFKVXKIKVLRSWCRQI------LKGLQFLHTRTP-PIIHRDLKCDNIFITGPT 168
Query: 549 -QPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQ 607
I D GL+ L S + +G T + APE + +
Sbjct: 169 GSVKIGDLGLATL-----KRASFAKAVIG-------------TPEFXAPEXY--EEKYDE 208
Query: 608 KWDVYSFGVVLLELLTGKSP 627
DVY+FG LE T + P
Sbjct: 209 SVDVYAFGXCXLEXATSEYP 228
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 94/223 (42%), Gaps = 44/223 (19%)
Query: 415 LGKSGLGIV---YKVVLGNGIPVAVRRLGEGGE-QRH-REFVTEVQAIAKVKHPNIVKLR 469
+G GIV Y VL VA+++L + Q H + E+ + V H NI+ L
Sbjct: 25 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 82
Query: 470 AYYWAPDEKL-------LISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLA 522
+ P + L L+ + + + NL ++ S L G+
Sbjct: 83 NVF-TPQKTLEEFQDVYLVMELM-DANLXQVIQMELDHERMSYLLYQMLX-------GIK 133
Query: 523 YLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYM 582
+LH +H D+KPSNI++ +D I DFGL+R ++ FM PY+
Sbjct: 134 HLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR---------TAGTSFM--MTPYV 179
Query: 583 KPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGK 625
T YRAPE + G + D++S G ++ E++ K
Sbjct: 180 ------VTRYYRAPEV-ILGMGYKENVDIWSVGCIMGEMVRHK 215
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 94/223 (42%), Gaps = 44/223 (19%)
Query: 415 LGKSGLGIV---YKVVLGNGIPVAVRRLGEGGE-QRH-REFVTEVQAIAKVKHPNIVKLR 469
+G GIV Y VL VA+++L + Q H + E+ + V H NI+ L
Sbjct: 70 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 127
Query: 470 AYYWAPDEKL-------LISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLA 522
+ P + L L+ + + + NL ++ S L G+
Sbjct: 128 NVF-TPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSYLLYQMLC-------GIK 178
Query: 523 YLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYM 582
+LH +H D+KPSNI++ +D I DFGL+R ++ FM PY+
Sbjct: 179 HLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---------TAGTSFM--MTPYV 224
Query: 583 KPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGK 625
T YRAPE + G + D++S G ++ E++ K
Sbjct: 225 ------VTRYYRAPEV-ILGMGYKENVDIWSVGCIMGEMVRHK 260
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 51/105 (48%), Gaps = 21/105 (20%)
Query: 520 GLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGAL 579
G+ +LH +H D+KPSNI++ +D I DFGL+R ++ FM
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---------TAGTSFM---- 181
Query: 580 PYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTG 624
M P T YRAPE + G + D++S G ++ E++ G
Sbjct: 182 --MTPEVV--TRYYRAPEV-ILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 99/259 (38%), Gaps = 54/259 (20%)
Query: 414 VLGKSGLGIVYKVVLGNGIP---VAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRA 470
VLG+ G V K N + A++++ E++ ++EV +A + H +V+
Sbjct: 13 VLGQGAFGQVVKA--RNALDSRYYAIKKI-RHTEEKLSTILSEVXLLASLNHQYVVR--- 66
Query: 471 YYWAPDEK----------------LLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIA 514
YY A E+ + ++ N L + + N W R+
Sbjct: 67 YYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYW----RLF 122
Query: 515 KGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSR-------LINITGNN 567
+ L+Y+H + +H ++KP NI +D I DFGL++ ++ + N
Sbjct: 123 RQILEALSYIH---SQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQN 179
Query: 568 PSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELL----T 623
S + A+ T Y A E +K D YS G++ E + T
Sbjct: 180 LPGSSDNLTSAIG---------TAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXIYPFST 230
Query: 624 G--KSPELSPTTSTSIEVP 640
G + L S SIE P
Sbjct: 231 GXERVNILKKLRSVSIEFP 249
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 94/223 (42%), Gaps = 44/223 (19%)
Query: 415 LGKSGLGIV---YKVVLGNGIPVAVRRLGEGGE-QRH-REFVTEVQAIAKVKHPNIVKLR 469
+G GIV Y VL VA+++L + Q H + E+ + V H NI+ L
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 89
Query: 470 AYYWAPDEKL-------LISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLA 522
+ P + L L+ + + + NL ++ S L G+
Sbjct: 90 NVF-TPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSYLLYQMLC-------GIK 140
Query: 523 YLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYM 582
+LH +H D+KPSNI++ +D I DFGL+R ++ FM PY+
Sbjct: 141 HLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---------TAGTSFM--MTPYV 186
Query: 583 KPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGK 625
T YRAPE + G + D++S G ++ E++ K
Sbjct: 187 ------VTRYYRAPEV-ILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 94/223 (42%), Gaps = 44/223 (19%)
Query: 415 LGKSGLGIV---YKVVLGNGIPVAVRRLGEGGE-QRH-REFVTEVQAIAKVKHPNIVKLR 469
+G GIV Y VL VA+++L + Q H + E+ + V H NI+ L
Sbjct: 31 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 88
Query: 470 AYYWAPDEKL-------LISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLA 522
+ P + L L+ + + + NL ++ S L G+
Sbjct: 89 NVF-TPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSYLLYQMLC-------GIK 139
Query: 523 YLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYM 582
+LH +H D+KPSNI++ +D I DFGL+R ++ FM PY+
Sbjct: 140 HLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---------TAGTSFM--MTPYV 185
Query: 583 KPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGK 625
T YRAPE + G + D++S G ++ E++ K
Sbjct: 186 ------VTRYYRAPEV-ILGMGYKENVDIWSVGCIMGEMVRHK 221
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 94/223 (42%), Gaps = 44/223 (19%)
Query: 415 LGKSGLGIV---YKVVLGNGIPVAVRRLGEGGE-QRH-REFVTEVQAIAKVKHPNIVKLR 469
+G GIV Y VL VA+++L + Q H + E+ + V H NI+ L
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 89
Query: 470 AYYWAPDEKL-------LISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLA 522
+ P + L L+ + + + NL ++ S L G+
Sbjct: 90 NVF-TPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSYLLYQMLC-------GIK 140
Query: 523 YLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYM 582
+LH +H D+KPSNI++ +D I DFGL+R ++ FM PY+
Sbjct: 141 HLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---------TAGTSFM--MTPYV 186
Query: 583 KPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGK 625
T YRAPE + G + D++S G ++ E++ K
Sbjct: 187 ------VTRYYRAPEV-ILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 94/223 (42%), Gaps = 44/223 (19%)
Query: 415 LGKSGLGIV---YKVVLGNGIPVAVRRLGEGGE-QRH-REFVTEVQAIAKVKHPNIVKLR 469
+G GIV Y VL VA+++L + Q H + E+ + V H NI+ L
Sbjct: 33 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 90
Query: 470 AYYWAPDEKL-------LISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLA 522
+ P + L L+ + + + NL ++ S L G+
Sbjct: 91 NVF-TPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSYLLYQMLC-------GIK 141
Query: 523 YLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYM 582
+LH +H D+KPSNI++ +D I DFGL+R ++ FM PY+
Sbjct: 142 HLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---------TAGTSFM--MTPYV 187
Query: 583 KPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGK 625
T YRAPE + G + D++S G ++ E++ K
Sbjct: 188 ------VTRYYRAPEV-ILGMGYKENVDIWSVGCIMGEMVRHK 223
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 94/223 (42%), Gaps = 44/223 (19%)
Query: 415 LGKSGLGIV---YKVVLGNGIPVAVRRLGEGGE-QRH-REFVTEVQAIAKVKHPNIVKLR 469
+G GIV Y VL VA+++L + Q H + E+ + V H NI+ L
Sbjct: 33 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 90
Query: 470 AYYWAPDEKL-------LISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLA 522
+ P + L L+ + + + NL ++ S L G+
Sbjct: 91 NVF-TPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSYLLYQMLC-------GIK 141
Query: 523 YLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYM 582
+LH +H D+KPSNI++ +D I DFGL+R ++ FM PY+
Sbjct: 142 HLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---------TAGTSFM--MTPYV 187
Query: 583 KPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGK 625
T YRAPE + G + D++S G ++ E++ K
Sbjct: 188 ------VTRYYRAPEV-ILGMGYKENVDIWSVGCIMGEMVRHK 223
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 86/192 (44%), Gaps = 24/192 (12%)
Query: 443 GEQRHREFVTEVQAIAKVK-HPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQP 501
G R R F EV+ + + + H N+++L ++ D L+ + + G++ + + R
Sbjct: 51 GHIRSRVF-REVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFN 109
Query: 502 STSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLD--NDFQPY-ISDFGLS 558
S + + A L +LH + H D+KP NIL + N P I DF L
Sbjct: 110 ELEAS-----VVVQDVASALDFLHN---KGIAHRDLKPENILCEHPNQVSPVKICDFDLG 161
Query: 559 RLINITGN-NPSSSGGFMG--GALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFG 615
I + G+ +P S+ + G+ YM P E + EA + R D++S G
Sbjct: 162 SGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSE----EASIYDKR----CDLWSLG 213
Query: 616 VVLLELLTGKSP 627
V+L LL+G P
Sbjct: 214 VILYILLSGYPP 225
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 94/223 (42%), Gaps = 44/223 (19%)
Query: 415 LGKSGLGIV---YKVVLGNGIPVAVRRLGEGGE-QRH-REFVTEVQAIAKVKHPNIVKLR 469
+G GIV Y VL VA+++L + Q H + E+ + V H NI+ L
Sbjct: 26 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 83
Query: 470 AYYWAPDEKL-------LISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLA 522
+ P + L L+ + + + NL ++ S L G+
Sbjct: 84 NVF-TPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSYLLYQMLC-------GIK 134
Query: 523 YLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYM 582
+LH +H D+KPSNI++ +D I DFGL+R ++ FM PY+
Sbjct: 135 HLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---------TAGTSFM--MTPYV 180
Query: 583 KPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGK 625
T YRAPE + G + D++S G ++ E++ K
Sbjct: 181 ------VTRYYRAPEV-ILGMGYKENVDIWSVGCIMGEMVRHK 216
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 94/223 (42%), Gaps = 44/223 (19%)
Query: 415 LGKSGLGIV---YKVVLGNGIPVAVRRLGEGGE-QRH-REFVTEVQAIAKVKHPNIVKLR 469
+G GIV Y VL VA+++L + Q H + E+ + V H NI+ L
Sbjct: 26 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 83
Query: 470 AYYWAPDEKL-------LISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLA 522
+ P + L L+ + + + NL ++ S L G+
Sbjct: 84 NVF-TPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSYLLYQMLC-------GIK 134
Query: 523 YLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYM 582
+LH +H D+KPSNI++ +D I DFGL+R ++ FM PY+
Sbjct: 135 HLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---------TAGTSFM--MTPYV 180
Query: 583 KPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGK 625
T YRAPE + G + D++S G ++ E++ K
Sbjct: 181 ------VTRYYRAPEV-ILGMGYKENVDIWSVGCIMGEMVRHK 216
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 95/221 (42%), Gaps = 34/221 (15%)
Query: 415 LGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWA 474
+GK G V++ G VAV+ + E+R E+ ++H NI+ + A
Sbjct: 50 IGKGRFGEVWRGKW-RGEEVAVK-IFSSREERSWFREAEIYQTVMLRHENILG----FIA 103
Query: 475 PDEK--------LLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLH- 525
D K L+SD+ +G+L + L +++ +++A TA GLA+LH
Sbjct: 104 ADNKDNGTWTQLWLVSDYHEHGSLFDYLN------RYTVTVEGMIKLALSTASGLAHLHM 157
Query: 526 -----ECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALP 580
+ P H D+K NIL+ + I+D GL+ + + + G
Sbjct: 158 EIVGTQGKP-AIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKR 216
Query: 581 YMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLEL 621
YM P + + N + E+ ++ D+Y+ G+V E+
Sbjct: 217 YMAPEVLDDSINMKHFES-------FKRADIYAMGLVFWEI 250
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 94/223 (42%), Gaps = 44/223 (19%)
Query: 415 LGKSGLGIV---YKVVLGNGIPVAVRRLGEGGE-QRH-REFVTEVQAIAKVKHPNIVKLR 469
+G GIV Y VL VA+++L + Q H + E+ + V H NI+ L
Sbjct: 25 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 82
Query: 470 AYYWAPDEKL-------LISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLA 522
+ P + L L+ + + + NL ++ S L G+
Sbjct: 83 NVF-TPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSYLLYQMLC-------GIK 133
Query: 523 YLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYM 582
+LH +H D+KPSNI++ +D I DFGL+R ++ FM PY+
Sbjct: 134 HLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---------TAGTSFM--MTPYV 179
Query: 583 KPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGK 625
T YRAPE + G + D++S G ++ E++ K
Sbjct: 180 ------VTRYYRAPEV-ILGMGYKENVDIWSVGCIMGEMVRHK 215
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 95/221 (42%), Gaps = 34/221 (15%)
Query: 415 LGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWA 474
+GK G V++ G VAV+ + E+R E+ ++H NI+ + A
Sbjct: 37 IGKGRFGEVWRGKW-RGEEVAVK-IFSSREERSWFREAEIYQTVMLRHENILG----FIA 90
Query: 475 PDEK--------LLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLH- 525
D K L+SD+ +G+L + L +++ +++A TA GLA+LH
Sbjct: 91 ADNKDNGTWTQLWLVSDYHEHGSLFDYLN------RYTVTVEGMIKLALSTASGLAHLHM 144
Query: 526 -----ECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALP 580
+ P H D+K NIL+ + I+D GL+ + + + G
Sbjct: 145 EIVGTQGKP-AIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKR 203
Query: 581 YMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLEL 621
YM P + + N + E+ ++ D+Y+ G+V E+
Sbjct: 204 YMAPEVLDDSINMKHFES-------FKRADIYAMGLVFWEI 237
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 93/221 (42%), Gaps = 39/221 (17%)
Query: 415 LGKSGLGIVYKVV-LGNGIPVAVRRLGEGGEQRHREF-VTEVQAIAKVKHPNIVKLRAYY 472
LG+ G V+++ G AV+++ R F E+ A A + P IV L Y
Sbjct: 101 LGRGSFGEVHRMEDKQTGFQCAVKKV------RLEVFRAEELMACAGLTSPRIVPL---Y 151
Query: 473 WAPDEKLLISDF---ISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTA-RGLAYLHECS 528
A E ++ F + G+L ++ + P R G A GL YLH
Sbjct: 152 GAVREGPWVNIFMELLEGGSLGQLVKEQGCLPED------RALYYLGQALEGLEYLHS-- 203
Query: 529 PRKFVHGDIKPSNILLDND-FQPYISDFGLSRLINITGNNPS-SSGGFMGGALPYMKPVQ 586
R+ +HGD+K N+LL +D + DFG + + G S +G ++ G
Sbjct: 204 -RRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPG--------- 253
Query: 587 TEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
T + APE V G K DV+S ++L +L G P
Sbjct: 254 ---TETHMAPEV-VLGRSCDAKVDVWSSCCMMLHMLNGCHP 290
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 92/220 (41%), Gaps = 37/220 (16%)
Query: 415 LGKSGLGIVYKVV-LGNGIPVAVRRLGEGGEQRHREF-VTEVQAIAKVKHPNIVKLRAYY 472
LG+ G V+++ G AV+++ R F V E+ A A + P IV L Y
Sbjct: 80 LGRGSFGEVHRMKDKQTGFQCAVKKV------RLEVFRVEELVACAGLSSPRIVPL---Y 130
Query: 473 WAPDEKLLISDF---ISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSP 529
A E ++ F + G+L ++ P L GL YLH
Sbjct: 131 GAVREGPWVNIFMELLEGGSLGQLIKQMGCLPE-----DRALYYLGQALEGLEYLH---T 182
Query: 530 RKFVHGDIKPSNILLDND-FQPYISDFGLSRLINITGNNPS-SSGGFMGGALPYMKPVQT 587
R+ +HGD+K N+LL +D + + DFG + + G S +G ++ G
Sbjct: 183 RRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPG---------- 232
Query: 588 EKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
T + APE V G K D++S ++L +L G P
Sbjct: 233 --TETHMAPEV-VMGKPCDAKVDIWSSCCMMLHMLNGCHP 269
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 95/221 (42%), Gaps = 34/221 (15%)
Query: 415 LGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWA 474
+GK G V++ G VAV+ + E+R E+ ++H NI+ + A
Sbjct: 12 IGKGRFGEVWRGKW-RGEEVAVK-IFSSREERSWFREAEIYQTVMLRHENILG----FIA 65
Query: 475 PDEK--------LLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLH- 525
D K L+SD+ +G+L + L +++ +++A TA GLA+LH
Sbjct: 66 ADNKDNGTWTQLWLVSDYHEHGSLFDYLN------RYTVTVEGMIKLALSTASGLAHLHM 119
Query: 526 -----ECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALP 580
+ P H D+K NIL+ + I+D GL+ + + + G
Sbjct: 120 EIVGTQGKP-AIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKR 178
Query: 581 YMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLEL 621
YM P + + N + E+ ++ D+Y+ G+V E+
Sbjct: 179 YMAPEVLDDSINMKHFES-------FKRADIYAMGLVFWEI 212
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 52/106 (49%), Gaps = 21/106 (19%)
Query: 520 GLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGAL 579
G+ +LH +H D+KPSNI++ +D I DFGL+R ++ FM
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---------TAGTSFM---- 181
Query: 580 PYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGK 625
M+P T YRAPE + G + D++S G ++ E++ K
Sbjct: 182 --MEPEVV--TRYYRAPEV-ILGMGYKENVDIWSVGCIMGEMVCHK 222
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 95/221 (42%), Gaps = 34/221 (15%)
Query: 415 LGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWA 474
+GK G V++ G VAV+ + E+R E+ ++H NI+ + A
Sbjct: 14 IGKGRFGEVWRGKW-RGEEVAVK-IFSSREERSWFREAEIYQTVMLRHENILG----FIA 67
Query: 475 PDEK--------LLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLH- 525
D K L+SD+ +G+L + L +++ +++A TA GLA+LH
Sbjct: 68 ADNKDNGTWTQLWLVSDYHEHGSLFDYLN------RYTVTVEGMIKLALSTASGLAHLHM 121
Query: 526 -----ECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALP 580
+ P H D+K NIL+ + I+D GL+ + + + G
Sbjct: 122 EIVGTQGKP-AIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKR 180
Query: 581 YMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLEL 621
YM P + + N + E+ ++ D+Y+ G+V E+
Sbjct: 181 YMAPEVLDDSINMKHFES-------FKRADIYAMGLVFWEI 214
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 102/241 (42%), Gaps = 40/241 (16%)
Query: 403 ELDELLRASAYVLGKSGLGIVYKVV-LGNGIPVAVRRL-GEGGEQRHREFVTEVQAIAKV 460
+ +++ + ++ +LG+ V V L NG AV+ + + G R R F EV+ + +
Sbjct: 9 KFEDMYKLTSELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVF-REVETLYQC 67
Query: 461 K-HPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTAR 519
+ + NI++L ++ L+ + + G++ + Q + R+ + A
Sbjct: 68 QGNKNILELIEFFEDDTRFYLVFEKLQGGSILAHI-----QKQKHFNEREASRVVRDVAA 122
Query: 520 GLAYLHECSPRKFVHGDIKPSNILLDN--DFQPY-ISDFGLSRLINITGN---------- 566
L +LH + H D+KP NIL ++ P I DF L + + +
Sbjct: 123 ALDFLH---TKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELT 179
Query: 567 NPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKS 626
P S +M P + V T++ Y ++ D++S GVVL +L+G
Sbjct: 180 TPCGSAEYMA---PEVVEVFTDQATFYD------------KRCDLWSLGVVLYIMLSGYP 224
Query: 627 P 627
P
Sbjct: 225 P 225
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 78/183 (42%), Gaps = 31/183 (16%)
Query: 451 VTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDF---ISNGNLANALRGRNGQPSTSLSW 507
V E+ A A + P IV L Y A E ++ F + G+L ++ P
Sbjct: 98 VEELVACAGLSSPRIVPL---YGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPED---- 150
Query: 508 STRLRIAKGTA-RGLAYLHECSPRKFVHGDIKPSNILLDND-FQPYISDFGLSRLINITG 565
R G A GL YLH R+ +HGD+K N+LL +D + + DFG + + G
Sbjct: 151 --RALYYLGQALEGLEYLHT---RRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDG 205
Query: 566 NNPS-SSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTG 624
S +G ++ G T + APE V G K D++S ++L +L G
Sbjct: 206 LGKSLLTGDYIPG------------TETHMAPEV-VMGKPCDAKVDIWSSCCMMLHMLNG 252
Query: 625 KSP 627
P
Sbjct: 253 CHP 255
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 79/181 (43%), Gaps = 28/181 (15%)
Query: 453 EVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLR 512
E+ +++ P + K Y + +I +++ G+ AL P +T LR
Sbjct: 75 EITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGS---ALDLLEPGPLDETQIATILR 131
Query: 513 IAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSG 572
+GL YLH K +H DIK +N+LL + ++DFG++ + T ++
Sbjct: 132 ---EILKGLDYLHS---EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNT-- 183
Query: 573 GFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP--ELS 630
F+G T + APE + + K D++S G+ +EL G+ P EL
Sbjct: 184 -FVG-------------TPFWMAPEV-IKQSAYDSKADIWSLGITAIELARGEPPHSELH 228
Query: 631 P 631
P
Sbjct: 229 P 229
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 95/221 (42%), Gaps = 34/221 (15%)
Query: 415 LGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWA 474
+GK G V++ G VAV+ + E+R E+ ++H NI+ + A
Sbjct: 11 IGKGRFGEVWRGKW-RGEEVAVK-IFSSREERSWFREAEIYQTVMLRHENILG----FIA 64
Query: 475 PDEK--------LLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLH- 525
D K L+SD+ +G+L + L +++ +++A TA GLA+LH
Sbjct: 65 ADNKDNGTWTQLWLVSDYHEHGSLFDYLN------RYTVTVEGMIKLALSTASGLAHLHM 118
Query: 526 -----ECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALP 580
+ P H D+K NIL+ + I+D GL+ + + + G
Sbjct: 119 EIVGTQGKP-AIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKR 177
Query: 581 YMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLEL 621
YM P + + N + E+ ++ D+Y+ G+V E+
Sbjct: 178 YMAPEVLDDSINMKHFES-------FKRADIYAMGLVFWEI 211
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 75/177 (42%), Gaps = 21/177 (11%)
Query: 451 VTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTR 510
+ E + +AKV IV L + + L+ ++ G++ + + + +
Sbjct: 233 MVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVD-EDNPGFQEPRA 291
Query: 511 LRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSS 570
+ GL +LH+ R ++ D+KP N+LLD+D ISD GL+ + + +
Sbjct: 292 IFYTAQIVSGLEHLHQ---RNIIYRDLKPENVLLDDDGNVRISDLGLA--VELKAGQ-TK 345
Query: 571 SGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
+ G+ G T + APE + G D ++ GV L E++ + P
Sbjct: 346 TKGYAG-------------TPGFMAPELLL-GEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 78/183 (42%), Gaps = 31/183 (16%)
Query: 451 VTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDF---ISNGNLANALRGRNGQPSTSLSW 507
V E+ A A + P IV L Y A E ++ F + G+L ++ P
Sbjct: 114 VEELVACAGLSSPRIVPL---YGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPED---- 166
Query: 508 STRLRIAKGTA-RGLAYLHECSPRKFVHGDIKPSNILLDND-FQPYISDFGLSRLINITG 565
R G A GL YLH R+ +HGD+K N+LL +D + + DFG + + G
Sbjct: 167 --RALYYLGQALEGLEYLHT---RRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDG 221
Query: 566 NNPS-SSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTG 624
S +G ++ G T + APE V G K D++S ++L +L G
Sbjct: 222 LGKSLLTGDYIPG------------TETHMAPEV-VMGKPCDAKVDIWSSCCMMLHMLNG 268
Query: 625 KSP 627
P
Sbjct: 269 CHP 271
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 95/221 (42%), Gaps = 34/221 (15%)
Query: 415 LGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWA 474
+GK G V++ G VAV+ + E+R E+ ++H NI+ + A
Sbjct: 17 IGKGRFGEVWRGKW-RGEEVAVK-IFSSREERSWFREAEIYQTVMLRHENILG----FIA 70
Query: 475 PDEK--------LLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLH- 525
D K L+SD+ +G+L + L +++ +++A TA GLA+LH
Sbjct: 71 ADNKDNGTWTQLWLVSDYHEHGSLFDYLN------RYTVTVEGMIKLALSTASGLAHLHM 124
Query: 526 -----ECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALP 580
+ P H D+K NIL+ + I+D GL+ + + + G
Sbjct: 125 EIVGTQGKP-AIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKR 183
Query: 581 YMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLEL 621
YM P + + N + E+ ++ D+Y+ G+V E+
Sbjct: 184 YMAPEVLDDSINMKHFES-------FKRADIYAMGLVFWEI 217
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 52/106 (49%), Gaps = 21/106 (19%)
Query: 520 GLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGAL 579
G+ +LH +H D+KPSNI++ +D I DFGL+R ++ FM
Sbjct: 143 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---------TAGTSFM--MT 188
Query: 580 PYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGK 625
PY+ T YRAPE + G + D++S G ++ E++ K
Sbjct: 189 PYV------VTRYYRAPEV-ILGMGYKENVDLWSVGCIMGEMVCHK 227
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 75/177 (42%), Gaps = 21/177 (11%)
Query: 451 VTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTR 510
+ E + +AKV IV L + + L+ ++ G++ + + + +
Sbjct: 233 MVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVD-EDNPGFQEPRA 291
Query: 511 LRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSS 570
+ GL +LH+ R ++ D+KP N+LLD+D ISD GL+ + + +
Sbjct: 292 IFYTAQIVSGLEHLHQ---RNIIYRDLKPENVLLDDDGNVRISDLGLA--VELKAGQ-TK 345
Query: 571 SGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
+ G+ G T + APE + G D ++ GV L E++ + P
Sbjct: 346 TKGYAG-------------TPGFMAPELLL-GEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 84/189 (44%), Gaps = 30/189 (15%)
Query: 444 EQRHREFVTEVQAIAKV-KHPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPS 502
++ R+ E++ + + +HPNI+ L+ Y ++++ + G L + + R S
Sbjct: 56 DKSKRDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKIL-RQKFFS 114
Query: 503 TSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNIL-LDNDFQP---YISDFGLS 558
+ + I K + YLH + VH D+KPSNIL +D P I DFG +
Sbjct: 115 EREASAVLFTITKT----VEYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFA 167
Query: 559 RLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVL 618
+ + + G + M P T N+ APE + D++S GV+L
Sbjct: 168 KQLR-------AENGLL------MTPCYTA---NFVAPEV-LERQGYDAACDIWSLGVLL 210
Query: 619 LELLTGKSP 627
+LTG +P
Sbjct: 211 YTMLTGYTP 219
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 80/183 (43%), Gaps = 33/183 (18%)
Query: 451 VTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNG-----NLANALRGRNG-QPSTS 504
+ E + +AKV IV L AY + L + I NG ++ N G Q +
Sbjct: 233 MVEKKILAKVHSRFIVSL-AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRA 291
Query: 505 LSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINIT 564
+ ++ ++ GL +LH+ R ++ D+KP N+LLD+D ISD GL+ + +
Sbjct: 292 IFYTAQI------VSGLEHLHQ---RNIIYRDLKPENVLLDDDGNVRISDLGLA--VELK 340
Query: 565 GNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTG 624
+ + G+ G T + APE + G D ++ GV L E++
Sbjct: 341 AGQ-TKTKGYAG-------------TPGFMAPELLL-GEEYDFSVDYFALGVTLYEMIAA 385
Query: 625 KSP 627
+ P
Sbjct: 386 RGP 388
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 75/177 (42%), Gaps = 21/177 (11%)
Query: 451 VTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTR 510
+ E + +AKV IV L + + L+ ++ G++ + + + +
Sbjct: 233 MVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVD-EDNPGFQEPRA 291
Query: 511 LRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSS 570
+ GL +LH+ R ++ D+KP N+LLD+D ISD GL+ + + +
Sbjct: 292 IFYTAQIVSGLEHLHQ---RNIIYRDLKPENVLLDDDGNVRISDLGLA--VELKAGQ-TK 345
Query: 571 SGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
+ G+ G T + APE + G D ++ GV L E++ + P
Sbjct: 346 TKGYAG-------------TPGFMAPELLL-GEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 52/106 (49%), Gaps = 21/106 (19%)
Query: 520 GLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGAL 579
G+ +LH +H D+KPSNI++ +D I DFGL+R ++ FM
Sbjct: 132 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---------TAGTSFM--MT 177
Query: 580 PYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGK 625
PY+ T YRAPE + G + D++S G ++ E++ K
Sbjct: 178 PYV------VTRYYRAPEV-ILGMGYKENVDLWSVGCIMGEMVCHK 216
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 95/223 (42%), Gaps = 39/223 (17%)
Query: 418 SGLGIVYKVVLG----NGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYW 473
+G G V LG G+ VA++++ + R+RE +Q +A + HPNIV+L++Y++
Sbjct: 31 AGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQI-MQDLAVLHHPNIVQLQSYFY 89
Query: 474 APDEKL-------LISDFISNGNLANALRG---RNGQPSTSLSWSTRLRIAKGTARGLAY 523
E+ ++ +++ + L R R P L ++ R +
Sbjct: 90 TLGERDRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQL----IRSIGC 144
Query: 524 LHECSPRKFVHGDIKPSNILLDN-DFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYM 582
LH S H DIKP N+L++ D + DFG ++ ++ + N
Sbjct: 145 LHLPSV-NVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPN--------------- 188
Query: 583 KPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGK 625
V + YRAPE D++S G + E++ G+
Sbjct: 189 --VAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGE 229
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 76/180 (42%), Gaps = 24/180 (13%)
Query: 449 EFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWS 508
E + E + ++ +P IV++ A + +L+ + G L L Q + +
Sbjct: 58 ELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAELGPLNKYL-----QQNRHVKDK 111
Query: 509 TRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNP 568
+ + + G+ YL E + FVH D+ N+LL ISDFGLS+ + N
Sbjct: 112 NIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXY 168
Query: 569 SSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKSP 627
+ G P +K E N Y+ K DV+SFGV++ E + G+ P
Sbjct: 169 KAQ---THGKWP-VKWYAPECINYYKFS----------SKSDVWSFGVLMWEAFSYGQKP 214
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 43/95 (45%), Gaps = 18/95 (18%)
Query: 534 HGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQ-TEKTNN 592
H D+KP NIL+ D Y+ DFG++ + T + + G G L Y P + +E
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIA---SATTDEKLTQLGNTVGTLYYXAPERFSESHAT 213
Query: 593 YRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
YRA D+Y+ VL E LTG P
Sbjct: 214 YRA--------------DIYALTCVLYECLTGSPP 234
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 79/181 (43%), Gaps = 28/181 (15%)
Query: 453 EVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLR 512
E+ +++ P + K Y + +I +++ G+ + L P +T LR
Sbjct: 55 EITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL---EPGPLDETQIATILR 111
Query: 513 IAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSG 572
+GL YLH K +H DIK +N+LL + ++DFG++ + T ++
Sbjct: 112 ---EILKGLDYLHS---EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNT-- 163
Query: 573 GFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP--ELS 630
F+G T + APE + + K D++S G+ +EL G+ P EL
Sbjct: 164 -FVG-------------TPFWMAPEV-IKQSAYDSKADIWSLGITAIELARGEPPHSELH 208
Query: 631 P 631
P
Sbjct: 209 P 209
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 77/184 (41%), Gaps = 42/184 (22%)
Query: 451 VTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISN---------GNLANALRGRNGQP 501
+ EV + +KH NIV L L+ +++ GN+ N
Sbjct: 48 IREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLDKDLKQYLDDCGNIINM-------- 99
Query: 502 STSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLI 561
+ +L + + RGLAY C +K +H D+KP N+L++ + ++DFGL+R
Sbjct: 100 -----HNVKLFLFQ-LLRGLAY---CHRQKVLHRDLKPQNLLINERGELKLADFGLARAK 150
Query: 562 NITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLEL 621
+I P+ + Y V T YR P+ + + D++ G + E+
Sbjct: 151 SI----PTKT---------YDNEVVTLW---YRPPDILLGSTDYSTQIDMWGVGCIFYEM 194
Query: 622 LTGK 625
TG+
Sbjct: 195 ATGR 198
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 76/184 (41%), Gaps = 32/184 (17%)
Query: 449 EFVTEVQAIAKVKHPNIVKL----RAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTS 504
E + E + ++ +P IV++ A W +L+ + G L L Q +
Sbjct: 64 ELLAEANVMQQLDNPYIVRMIGICEAESW-----MLVMEMAELGPLNKYL-----QQNRH 113
Query: 505 LSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINIT 564
+ + + + G+ YL E + FVH D+ N+LL ISDFGLS+ +
Sbjct: 114 VKDKNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRAD 170
Query: 565 GNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT- 623
N + G P +K E N Y+ K DV+SFGV++ E +
Sbjct: 171 ENYYKAQ---THGKWP-VKWYAPECINYYKFS----------SKSDVWSFGVLMWEAFSY 216
Query: 624 GKSP 627
G+ P
Sbjct: 217 GQKP 220
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/220 (20%), Positives = 84/220 (38%), Gaps = 29/220 (13%)
Query: 414 VLGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHRE----FVTEVQAIAKVKHPNIVKLR 469
V+G+ G V V V +L E R F E +A P +V+L
Sbjct: 82 VIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLF 141
Query: 470 AYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSP 529
+ ++ +++ G+L N + + + ++ + +A +
Sbjct: 142 CAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWAKFYTAEVVLALDAIHSMG------- 194
Query: 530 RKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKP--VQT 587
+H D+KP N+LLD ++DFG ++ TG + G Y+ P +++
Sbjct: 195 --LIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTA---VGTPDYISPEVLKS 249
Query: 588 EKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
+ + Y E D +S GV L E+L G +P
Sbjct: 250 QGGDGYYGREC-----------DWWSVGVFLFEMLVGDTP 278
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 76/184 (41%), Gaps = 32/184 (17%)
Query: 449 EFVTEVQAIAKVKHPNIVKL----RAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTS 504
E + E + ++ +P IV++ A W +L+ + G L L Q +
Sbjct: 72 ELLAEANVMQQLDNPYIVRMIGICEAESW-----MLVMEMAELGPLNKYL-----QQNRH 121
Query: 505 LSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINIT 564
+ + + + G+ YL E + FVH D+ N+LL ISDFGLS+ +
Sbjct: 122 VKDKNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRAD 178
Query: 565 GNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT- 623
N + G P +K E N Y+ K DV+SFGV++ E +
Sbjct: 179 ENYYKAQ---THGKWP-VKWYAPECINYYKFS----------SKSDVWSFGVLMWEAFSY 224
Query: 624 GKSP 627
G+ P
Sbjct: 225 GQKP 228
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 76/180 (42%), Gaps = 24/180 (13%)
Query: 449 EFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWS 508
E + E + ++ +P IV++ A + +L+ + G L L Q + +
Sbjct: 52 ELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAELGPLNKYL-----QQNRHVKDK 105
Query: 509 TRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNP 568
+ + + G+ YL E + FVH D+ N+LL ISDFGLS+ + N
Sbjct: 106 NIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 162
Query: 569 SSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKSP 627
+ G P +K E N Y+ K DV+SFGV++ E + G+ P
Sbjct: 163 KAQ---THGKWP-VKWYAPECINYYKFS----------SKSDVWSFGVLMWEAFSYGQKP 208
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 76/180 (42%), Gaps = 24/180 (13%)
Query: 449 EFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWS 508
E + E + ++ +P IV++ A + +L+ + G L L Q + +
Sbjct: 417 ELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAELGPLNKYL-----QQNRHVKDK 470
Query: 509 TRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNP 568
+ + + G+ YL E + FVH D+ N+LL ISDFGLS+ + N
Sbjct: 471 NIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 527
Query: 569 SSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKSP 627
+ G P +K E N Y+ K DV+SFGV++ E + G+ P
Sbjct: 528 KAQ---THGKWP-VKWYAPECINYYKFS----------SKSDVWSFGVLMWEAFSYGQKP 573
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 76/180 (42%), Gaps = 24/180 (13%)
Query: 449 EFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWS 508
E + E + ++ +P IV++ A + +L+ + G L L Q + +
Sbjct: 416 ELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAELGPLNKYL-----QQNRHVKDK 469
Query: 509 TRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNP 568
+ + + G+ YL E + FVH D+ N+LL ISDFGLS+ + N
Sbjct: 470 NIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 526
Query: 569 SSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKSP 627
+ G P +K E N Y+ K DV+SFGV++ E + G+ P
Sbjct: 527 KAQ---THGKWP-VKWYAPECINYYKFS----------SKSDVWSFGVLMWEAFSYGQKP 572
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 76/184 (41%), Gaps = 32/184 (17%)
Query: 449 EFVTEVQAIAKVKHPNIVKL----RAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTS 504
E + E + ++ +P IV++ A W +L+ + G L L+ +
Sbjct: 74 ELLAEANVMQQLDNPYIVRMIGICEAESW-----MLVMEMAELGPLNKYLQQNRHVKDKN 128
Query: 505 LSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINIT 564
+ + + + G+ YL E + FVH D+ N+LL ISDFGLS+ +
Sbjct: 129 I-----IELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRAD 180
Query: 565 GNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT- 623
N + G P +K E N Y+ K DV+SFGV++ E +
Sbjct: 181 ENYYKAQT---HGKWP-VKWYAPECINYYKFS----------SKSDVWSFGVLMWEAFSY 226
Query: 624 GKSP 627
G+ P
Sbjct: 227 GQKP 230
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 76/184 (41%), Gaps = 32/184 (17%)
Query: 449 EFVTEVQAIAKVKHPNIVKL----RAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTS 504
E + E + ++ +P IV++ A W +L+ + G L L+ +
Sbjct: 74 ELLAEANVMQQLDNPYIVRMIGICEAESW-----MLVMEMAELGPLNKYLQQNRHVKDKN 128
Query: 505 LSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINIT 564
+ + + + G+ YL E + FVH D+ N+LL ISDFGLS+ +
Sbjct: 129 I-----IELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRAD 180
Query: 565 GNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT- 623
N + G P +K E N Y+ K DV+SFGV++ E +
Sbjct: 181 ENYYKAQT---HGKWP-VKWYAPECINYYKFS----------SKSDVWSFGVLMWEAFSY 226
Query: 624 GKSP 627
G+ P
Sbjct: 227 GQKP 230
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 86/222 (38%), Gaps = 30/222 (13%)
Query: 414 VLGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHRE----FVTEVQAIAKVKHPNIVKLR 469
V+G+ G V V + N + ++ E R F E + I L
Sbjct: 97 VIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQWITALH 156
Query: 470 AYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSP 529
+ + L+ D+ G+L L + ++ R I + + +H+
Sbjct: 157 YAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMA---RFYIGE-MVLAIDSIHQL-- 210
Query: 530 RKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEK 589
+VH DIKP N+LLD + ++DFG +N G SS +G
Sbjct: 211 -HYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVA--VG------------- 254
Query: 590 TNNYRAPEARVPGNRPMQKW----DVYSFGVVLLELLTGKSP 627
T +Y +PE M K+ D +S GV + E+L G++P
Sbjct: 255 TPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETP 296
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 86/222 (38%), Gaps = 30/222 (13%)
Query: 414 VLGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHRE----FVTEVQAIAKVKHPNIVKLR 469
V+G+ G V V + N + ++ E R F E + I L
Sbjct: 81 VIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQWITALH 140
Query: 470 AYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSP 529
+ + L+ D+ G+L L + ++ R I + + +H+
Sbjct: 141 YAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMA---RFYIGE-MVLAIDSIHQL-- 194
Query: 530 RKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEK 589
+VH DIKP N+LLD + ++DFG +N G SS +G
Sbjct: 195 -HYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVA--VG------------- 238
Query: 590 TNNYRAPEARVPGNRPMQKW----DVYSFGVVLLELLTGKSP 627
T +Y +PE M K+ D +S GV + E+L G++P
Sbjct: 239 TPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETP 280
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 52/106 (49%), Gaps = 21/106 (19%)
Query: 520 GLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGAL 579
G+ +LH +H D+KPSNI++ +D I DFGL+R ++ FM
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---------TAGTSFM---- 181
Query: 580 PYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGK 625
M+P T YRAPE + G + D++S G ++ E++ K
Sbjct: 182 --MEPEVV--TRYYRAPEV-ILGMGYKENVDLWSVGCIMGEMVCHK 222
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 76/184 (41%), Gaps = 32/184 (17%)
Query: 449 EFVTEVQAIAKVKHPNIVKL----RAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTS 504
E + E + ++ +P IV++ A W +L+ + G L L Q +
Sbjct: 54 ELLAEANVMQQLDNPYIVRMIGICEAESW-----MLVMEMAELGPLNKYL-----QQNRH 103
Query: 505 LSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINIT 564
+ + + + G+ YL E + FVH D+ N+LL ISDFGLS+ +
Sbjct: 104 VKDKNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRAD 160
Query: 565 GNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT- 623
N + G P +K E N Y+ K DV+SFGV++ E +
Sbjct: 161 ENYYKAQT---HGKWP-VKWYAPECINYYKFS----------SKSDVWSFGVLMWEAFSY 206
Query: 624 GKSP 627
G+ P
Sbjct: 207 GQKP 210
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 76/180 (42%), Gaps = 24/180 (13%)
Query: 449 EFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWS 508
E + E + ++ +P IV++ A + +L+ + G L L Q + +
Sbjct: 58 ELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAELGPLNKYL-----QQNRHVKDK 111
Query: 509 TRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNP 568
+ + + G+ YL E + FVH D+ N+LL ISDFGLS+ + N
Sbjct: 112 NIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 168
Query: 569 SSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKSP 627
+ G P +K E N Y+ K DV+SFGV++ E + G+ P
Sbjct: 169 KAQ---THGKWP-VKWYAPECINYYKFS----------SKSDVWSFGVLMWEAFSYGQKP 214
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 77/181 (42%), Gaps = 28/181 (15%)
Query: 453 EVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLR 512
E+ +++ P + K Y + +I +++ G+ + L P +T LR
Sbjct: 55 EITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL---EPGPLDETQIATILR 111
Query: 513 IAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSG 572
+GL YLH K +H DIK +N+LL + ++DFG++ + +
Sbjct: 112 ---EILKGLDYLHS---EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLT---DTQIKRN 162
Query: 573 GFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP--ELS 630
F+G T + APE + + K D++S G+ +EL G+ P EL
Sbjct: 163 XFVG-------------TPFWMAPEV-IKQSAYDSKADIWSLGITAIELARGEPPHSELH 208
Query: 631 P 631
P
Sbjct: 209 P 209
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 77/181 (42%), Gaps = 28/181 (15%)
Query: 453 EVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLR 512
E+ +++ P + K Y + +I +++ G+ + L P +T LR
Sbjct: 70 EITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL---EPGPLDETQIATILR 126
Query: 513 IAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSG 572
+GL YLH K +H DIK +N+LL + ++DFG++ + +
Sbjct: 127 ---EILKGLDYLHS---EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLT---DTQIKRN 177
Query: 573 GFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP--ELS 630
F+G T + APE + + K D++S G+ +EL G+ P EL
Sbjct: 178 XFVG-------------TPFWMAPEV-IKQSAYDSKADIWSLGITAIELARGEPPHSELH 223
Query: 631 P 631
P
Sbjct: 224 P 224
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 75/175 (42%), Gaps = 26/175 (14%)
Query: 453 EVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLR 512
E+ +++ + K Y + +I +++ G+ + LR P +T L
Sbjct: 71 EITVLSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRA---GPFDEFQIATML- 126
Query: 513 IAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSG 572
K +GL YLH K +H DIK +N+LL ++DFG++ + T ++
Sbjct: 127 --KEILKGLDYLHS---EKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNT-- 179
Query: 573 GFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
F+G T + APE + + K D++S G+ +EL G+ P
Sbjct: 180 -FVG-------------TPFWMAPEV-IQQSAYDSKADIWSLGITAIELAKGEPP 219
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 88/209 (42%), Gaps = 35/209 (16%)
Query: 434 VAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANA 493
V ++ L + F ++K+ H ++V + DE +L+ +F+ G+L
Sbjct: 43 VLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCFCGDENILVQEFVKFGSLDTY 102
Query: 494 LRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILL--DNDFQ-- 549
L + + ++ W +L +AK A + +L E + +HG++ NILL + D +
Sbjct: 103 L--KKNKNCINILW--KLEVAKQLAWAMHFLEENT---LIHGNVCAKNILLIREEDRKTG 155
Query: 550 --PYI--SDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRP 605
P+I SD G+S I + + + +P++ P E N N
Sbjct: 156 NPPFIKLSDPGIS--ITVLPKD------ILQERIPWVPPECIENPKNL---------NLA 198
Query: 606 MQKWDVYSFGVVLLELLTGKSPELSPTTS 634
KW SFG L E+ +G LS S
Sbjct: 199 TDKW---SFGTTLWEICSGGDKPLSALDS 224
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 90/220 (40%), Gaps = 37/220 (16%)
Query: 415 LGKSGLGIVYKVV-LGNGIPVAVRRLGEGGEQRHREF-VTEVQAIAKVKHPNIVKLRAYY 472
LG+ G V+++ G AV+++ R F E+ A A + P IV L Y
Sbjct: 82 LGRGSFGEVHRMEDKQTGFQCAVKKV------RLEVFRAEELMACAGLTSPRIVPL---Y 132
Query: 473 WAPDEKLLISDF---ISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSP 529
A E ++ F + G+L ++ + P L GL YLH
Sbjct: 133 GAVREGPWVNIFMELLEGGSLGQLVKEQGCLPE-----DRALYYLGQALEGLEYLHS--- 184
Query: 530 RKFVHGDIKPSNILLDND-FQPYISDFGLSRLINITG-NNPSSSGGFMGGALPYMKPVQT 587
R+ +HGD+K N+LL +D + DFG + + G +G ++ G
Sbjct: 185 RRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPG---------- 234
Query: 588 EKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
T + APE V G K DV+S ++L +L G P
Sbjct: 235 --TETHMAPEV-VLGRSCDAKVDVWSSCCMMLHMLNGCHP 271
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 96/225 (42%), Gaps = 37/225 (16%)
Query: 414 VLGKSGLG-IVYKVVLGNGIPVAVRR-LGEGGEQRHREFVTEVQAIAKV-KHPNIVKLRA 470
VLG G IVY+ + N VAV+R L E RE VQ + + +HPN+++
Sbjct: 31 VLGHGAEGTIVYRGMFDNR-DVAVKRILPECFSFADRE----VQLLRESDEHPNVIR--- 82
Query: 471 YYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPR 530
Y+ ++ +I+ A L+ Q + + + + T GLA+LH +
Sbjct: 83 YFCTEKDRQF--QYIAIELCAATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLN-- 138
Query: 531 KFVHGDIKPSNILL-----DNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPV 585
VH D+KP NIL+ + ISDFGL + + + ++ S G G
Sbjct: 139 -IVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPG--------- 188
Query: 586 QTEKTNNYRAPEARVPGNR--PMQKWDVYSFGVVLLELLT-GKSP 627
T + APE + P D++S G V +++ G P
Sbjct: 189 ----TEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHP 229
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 47/107 (43%), Gaps = 21/107 (19%)
Query: 519 RGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGA 578
RGL +LH + VH D+KP NIL+ + Q ++DFGL+R+ +
Sbjct: 131 RGLDFLHS---HRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQ-------------- 173
Query: 579 LPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGK 625
M T YRAPE + + D++S G + E+ K
Sbjct: 174 ---MALTSVVVTLWYRAPEVLLQSSYAT-PVDLWSVGCIFAEMFRRK 216
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 47/107 (43%), Gaps = 21/107 (19%)
Query: 519 RGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGA 578
RGL +LH + VH D+KP NIL+ + Q ++DFGL+R+ +
Sbjct: 131 RGLDFLHS---HRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQ-------------- 173
Query: 579 LPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGK 625
M T YRAPE + + D++S G + E+ K
Sbjct: 174 ---MALTSVVVTLWYRAPEVLLQSSYAT-PVDLWSVGCIFAEMFRRK 216
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 47/107 (43%), Gaps = 21/107 (19%)
Query: 519 RGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGA 578
RGL +LH + VH D+KP NIL+ + Q ++DFGL+R+ +
Sbjct: 131 RGLDFLHS---HRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQ-------------- 173
Query: 579 LPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGK 625
M T YRAPE + + D++S G + E+ K
Sbjct: 174 ---MALTSVVVTLWYRAPEVLLQSSYAT-PVDLWSVGCIFAEMFRRK 216
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 81/220 (36%), Gaps = 26/220 (11%)
Query: 414 VLGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHRE----FVTEVQAIAKVKHPNIVKLR 469
V+G+ G V V L N V ++ E R F E + I L
Sbjct: 81 VIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLH 140
Query: 470 AYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLS--WSTRLRIAKGTARGLAYLHEC 527
+ + L+ D+ G+L L + ++ + + IA + L Y
Sbjct: 141 YAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHY---- 196
Query: 528 SPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQT 587
VH DIKP NIL+D + ++DFG + G SS G Y+ P
Sbjct: 197 -----VHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVA---VGTPDYISP--- 245
Query: 588 EKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
+A E P W +S GV + E+L G++P
Sbjct: 246 ---EILQAMEGGKGRYGPECDW--WSLGVCMYEMLYGETP 280
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 57/128 (44%), Gaps = 22/128 (17%)
Query: 451 VTEVQAIAKVKHPNIVKL--------RAYYWAPDEKLLISDFISN---GNLANALRGRNG 499
+ E++ + +KH N+V L Y L+ DF + G L+N L
Sbjct: 65 LREIKILQLLKHENVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVL----- 119
Query: 500 QPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSR 559
+ S R+ + GL Y+H K +H D+K +N+L+ D ++DFGL+R
Sbjct: 120 ---VKFTLSEIKRVMQMLLNGLYYIHR---NKILHRDMKAANVLITRDGVLKLADFGLAR 173
Query: 560 LINITGNN 567
++ N+
Sbjct: 174 AFSLAKNS 181
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 57/128 (44%), Gaps = 22/128 (17%)
Query: 451 VTEVQAIAKVKHPNIVKL--------RAYYWAPDEKLLISDFISN---GNLANALRGRNG 499
+ E++ + +KH N+V L Y L+ DF + G L+N L
Sbjct: 65 LREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVL----- 119
Query: 500 QPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSR 559
+ S R+ + GL Y+H K +H D+K +N+L+ D ++DFGL+R
Sbjct: 120 ---VKFTLSEIKRVMQMLLNGLYYIHR---NKILHRDMKAANVLITRDGVLKLADFGLAR 173
Query: 560 LINITGNN 567
++ N+
Sbjct: 174 AFSLAKNS 181
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 57/128 (44%), Gaps = 22/128 (17%)
Query: 451 VTEVQAIAKVKHPNIVKL--------RAYYWAPDEKLLISDFISN---GNLANALRGRNG 499
+ E++ + +KH N+V L Y L+ DF + G L+N L
Sbjct: 65 LREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVL----- 119
Query: 500 QPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSR 559
+ S R+ + GL Y+H K +H D+K +N+L+ D ++DFGL+R
Sbjct: 120 ---VKFTLSEIKRVMQMLLNGLYYIHR---NKILHRDMKAANVLITRDGVLKLADFGLAR 173
Query: 560 LINITGNN 567
++ N+
Sbjct: 174 AFSLAKNS 181
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 57/128 (44%), Gaps = 22/128 (17%)
Query: 451 VTEVQAIAKVKHPNIVKL--------RAYYWAPDEKLLISDFISN---GNLANALRGRNG 499
+ E++ + +KH N+V L Y L+ DF + G L+N L
Sbjct: 64 LREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVL----- 118
Query: 500 QPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSR 559
+ S R+ + GL Y+H K +H D+K +N+L+ D ++DFGL+R
Sbjct: 119 ---VKFTLSEIKRVMQMLLNGLYYIHR---NKILHRDMKAANVLITRDGVLKLADFGLAR 172
Query: 560 LINITGNN 567
++ N+
Sbjct: 173 AFSLAKNS 180
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 77/182 (42%), Gaps = 32/182 (17%)
Query: 453 EVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANAL--RGRNGQPSTSLSWSTR 510
E +KHP+IV+L Y + ++ +F+ +L + R G + S
Sbjct: 76 EASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHY 135
Query: 511 LRIAKGTARGLAYLHECSPRKFVHGDIKPSNILL---DNDFQPYISDFGLSRLINITGNN 567
+R + L L C +H D+KP +LL +N + FG++ + G +
Sbjct: 136 MR------QILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQL---GES 186
Query: 568 PSSSGGFMGGALPYMKPVQTEKTNNYRAPEA--RVPGNRPMQKWDVYSFGVVLLELLTGK 625
+GG +G T ++ APE R P +P+ DV+ GV+L LL+G
Sbjct: 187 GLVAGGRVG-------------TPHFMAPEVVKREPYGKPV---DVWGCGVILFILLSGC 230
Query: 626 SP 627
P
Sbjct: 231 LP 232
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 77/182 (42%), Gaps = 32/182 (17%)
Query: 453 EVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANAL--RGRNGQPSTSLSWSTR 510
E +KHP+IV+L Y + ++ +F+ +L + R G + S
Sbjct: 78 EASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHY 137
Query: 511 LRIAKGTARGLAYLHECSPRKFVHGDIKPSNILL---DNDFQPYISDFGLSRLINITGNN 567
+R + L L C +H D+KP +LL +N + FG++ + G +
Sbjct: 138 MR------QILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQL---GES 188
Query: 568 PSSSGGFMGGALPYMKPVQTEKTNNYRAPEA--RVPGNRPMQKWDVYSFGVVLLELLTGK 625
+GG +G T ++ APE R P +P+ DV+ GV+L LL+G
Sbjct: 189 GLVAGGRVG-------------TPHFMAPEVVKREPYGKPV---DVWGCGVILFILLSGC 232
Query: 626 SP 627
P
Sbjct: 233 LP 234
>pdb|3E7E|A Chain A, Structure And Substrate Recruitment Of The Human Spindle
Checkpoint Kinase Bub
Length = 365
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 67/165 (40%), Gaps = 9/165 (5%)
Query: 390 EGELVAIDKGFTFELDELLRASAYVLGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHR- 448
+ +L AI F+L L ++LG+ VY+ G+ ++ Q+
Sbjct: 48 QCKLPAIKPKTEFQLGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN 107
Query: 449 --EFVTEVQAIAKVK---HPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPST 503
EF Q + ++K +K + + + +L+ + S G L NA+ P
Sbjct: 108 PWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEK 167
Query: 504 SLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDF 548
+ + A + +H+C + +HGDIKP N +L N F
Sbjct: 168 VMPQGLVISFAMRMLYMIEQVHDC---EIIHGDIKPDNFILGNGF 209
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 87/209 (41%), Gaps = 35/209 (16%)
Query: 434 VAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANA 493
V ++ L + F ++K+ H ++V DE +L+ +F+ G+L
Sbjct: 43 VLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTY 102
Query: 494 LRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILL--DNDFQ-- 549
L + + ++ W +L +AK A + +L E + +HG++ NILL + D +
Sbjct: 103 L--KKNKNCINILW--KLEVAKQLAAAMHFLEENT---LIHGNVCAKNILLIREEDRKTG 155
Query: 550 --PYI--SDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRP 605
P+I SD G+S I + + + +P++ P E N N
Sbjct: 156 NPPFIKLSDPGIS--ITVLPKD------ILQERIPWVPPECIENPKNL---------NLA 198
Query: 606 MQKWDVYSFGVVLLELLTGKSPELSPTTS 634
KW SFG L E+ +G LS S
Sbjct: 199 TDKW---SFGTTLWEICSGGDKPLSALDS 224
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 82/204 (40%), Gaps = 31/204 (15%)
Query: 429 GNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWAP--DEKLLISDFIS 486
GN I V V ++ + ++ R+F E + HPN++ + +P LI+ +
Sbjct: 33 GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWXP 92
Query: 487 NGNLANALR-GRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLD 545
G+L N L G N + S ++ A ARG A+LH P H + ++ +D
Sbjct: 93 YGSLYNVLHEGTN----FVVDQSQAVKFALDXARGXAFLHTLEPLIPRHA-LNSRSVXID 147
Query: 546 NDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEA--RVPGN 603
D IS + G + + + APEA + P +
Sbjct: 148 EDXTARISXADVKFSFQSPGRXYAPA---------------------WVAPEALQKKPED 186
Query: 604 RPMQKWDVYSFGVVLLELLTGKSP 627
+ D +SF V+L EL+T + P
Sbjct: 187 TNRRSADXWSFAVLLWELVTREVP 210
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 74/186 (39%), Gaps = 37/186 (19%)
Query: 517 TARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMG 576
A+G+ +L + RK +H D+ NILL I DFGL+R I +P
Sbjct: 200 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIY---KDPD------- 246
Query: 577 GALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTS 636
Y++ + APE +Q DV+SFGV+L E+ + + SP
Sbjct: 247 ----YVRKGDARLPLKWMAPETIFDRVYTIQS-DVWSFGVLLWEIFSLGA---SPYPGVK 298
Query: 637 IEVPDLVRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMK 696
I+ + R +K+G P D + Q + L C +P RP
Sbjct: 299 ID-EEFCRRLKEGTRMRAP--DYTTPEMYQTM-------------LDCWHGEPSQRPTFS 342
Query: 697 NVSENL 702
+ E+L
Sbjct: 343 ELVEHL 348
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 74/186 (39%), Gaps = 37/186 (19%)
Query: 517 TARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMG 576
A+G+ +L + RK +H D+ NILL I DFGL+R I +P
Sbjct: 202 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIY---KDPD------- 248
Query: 577 GALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTS 636
Y++ + APE +Q DV+SFGV+L E+ + + SP
Sbjct: 249 ----YVRKGDARLPLKWMAPETIFDRVYTIQS-DVWSFGVLLWEIFSLGA---SPYPGVK 300
Query: 637 IEVPDLVRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMK 696
I+ + R +K+G P D + Q + L C +P RP
Sbjct: 301 ID-EEFCRRLKEGTRMRAP--DYTTPEMYQTM-------------LDCWHGEPSQRPTFS 344
Query: 697 NVSENL 702
+ E+L
Sbjct: 345 ELVEHL 350
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 87/219 (39%), Gaps = 30/219 (13%)
Query: 415 LGKSGLGIVYKVV---LGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVK---HPNIVKL 468
+G G VYK G+ + + R+ G E V EV + +++ HPN+V+L
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRL 71
Query: 469 RAYYWAPDEKLLISDFISNGNLANALRGR-NGQPSTSLSWSTRLRIAKGTARGLAYLHE- 526
I + ++ LR + P L T + + RGL +LH
Sbjct: 72 MDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHAN 131
Query: 527 CSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQ 586
C VH D+KP NIL+ + ++DFGL+R+ + + PV
Sbjct: 132 C----IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA---------------LDPVV 172
Query: 587 TEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGK 625
T YRAPE + D++S G + E+ K
Sbjct: 173 V--TLWYRAPEVLLQSTY-ATPVDMWSVGCIFAEMFRRK 208
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 87/219 (39%), Gaps = 30/219 (13%)
Query: 415 LGKSGLGIVYKVV---LGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVK---HPNIVKL 468
+G G VYK G+ + + R+ G E V EV + +++ HPN+V+L
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRL 71
Query: 469 RAYYWAPDEKLLISDFISNGNLANALRGR-NGQPSTSLSWSTRLRIAKGTARGLAYLHE- 526
I + ++ LR + P L T + + RGL +LH
Sbjct: 72 MDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHAN 131
Query: 527 CSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQ 586
C VH D+KP NIL+ + ++DFGL+R+ + + PV
Sbjct: 132 C----IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA---------------LAPVV 172
Query: 587 TEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGK 625
T YRAPE + D++S G + E+ K
Sbjct: 173 V--TLWYRAPEVLLQSTY-ATPVDMWSVGCIFAEMFRRK 208
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 74/186 (39%), Gaps = 37/186 (19%)
Query: 517 TARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMG 576
A+G+ +L + RK +H D+ NILL I DFGL+R I +P
Sbjct: 209 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIY---KDPD------- 255
Query: 577 GALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTS 636
Y++ + APE +Q DV+SFGV+L E+ + + SP
Sbjct: 256 ----YVRKGDARLPLKWMAPETIFDRVYTIQS-DVWSFGVLLWEIFSLGA---SPYPGVK 307
Query: 637 IEVPDLVRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMK 696
I+ + R +K+G P D + Q + L C +P RP
Sbjct: 308 ID-EEFCRRLKEGTRMRAP--DYTTPEMYQTM-------------LDCWHGEPSQRPTFS 351
Query: 697 NVSENL 702
+ E+L
Sbjct: 352 ELVEHL 357
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 74/175 (42%), Gaps = 26/175 (14%)
Query: 453 EVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLR 512
E+ +++ P I + Y + +I +++ G+ + L+ P +T LR
Sbjct: 67 EITVLSQCDSPYITRYFGSYLKSTKLWIIMEYLGGGSALDLLKP---GPLEETYIATILR 123
Query: 513 IAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSG 572
+GL YLH S RK +H DIK +N+LL ++DFG++ + +
Sbjct: 124 ---EILKGLDYLH--SERK-IHRDIKAANVLLSEQGDVKLADFGVAGQLT---DTQIKRN 174
Query: 573 GFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
F+G V + +++A D++S G+ +EL G+ P
Sbjct: 175 XFVGTPFWMAPEVIKQSAYDFKA--------------DIWSLGITAIELAKGEPP 215
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 87/222 (39%), Gaps = 36/222 (16%)
Query: 415 LGKSGLGIVYK---VVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAY 471
LG+ G VYK V + + RL E + EV + +++H NI++L++
Sbjct: 42 LGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSV 101
Query: 472 YWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAY-LHECSPR 530
LI ++ N + + + P S+ R+ K L ++ C R
Sbjct: 102 IHHNHRLHLIFEYAEN----DLKKYMDKNPDVSM------RVIKSFLYQLINGVNFCHSR 151
Query: 531 KFVHGDIKPSNILL---DNDFQPY--ISDFGLSRLINITGNNPSSSGGFMGGALPYMKPV 585
+ +H D+KP N+LL D P I DFGL+R I P +
Sbjct: 152 RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGI----------------PIRQFT 195
Query: 586 QTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
T YR PE + D++S + E+L K+P
Sbjct: 196 HEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLM-KTP 236
>pdb|2O6S|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors B59
pdb|2O6S|B Chain B, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors B59
Length = 208
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 53/99 (53%), Gaps = 6/99 (6%)
Query: 108 SLPDQLFNA-TSLHSIFLYGNNLSGSLPPSVCN-LPRLQNLDLSNNSFSGSLPDGL-KNC 164
SLP+ +F+ TSL ++L GN L SLP V N L L L+LS N SLP+G+
Sbjct: 42 SLPNGVFDELTSLTQLYLGGNKLQ-SLPNGVFNKLTSLTYLNLSTNQLQ-SLPNGVFDKL 99
Query: 165 KQLQRLILARNKFSGQIPAGIWPELENLVQLDLSDNDFK 203
QL+ L L N+ +P G++ +L L L L N K
Sbjct: 100 TQLKELALNTNQLQS-LPDGVFDKLTQLKDLRLYQNQLK 137
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 74/186 (39%), Gaps = 37/186 (19%)
Query: 517 TARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMG 576
A+G+ +L + RK +H D+ NILL I DFGL+R I +P
Sbjct: 207 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIY---KDPD------- 253
Query: 577 GALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTS 636
Y++ + APE +Q DV+SFGV+L E+ + + SP
Sbjct: 254 ----YVRKGDARLPLKWMAPETIFDRVYTIQS-DVWSFGVLLWEIFSLGA---SPYPGVK 305
Query: 637 IEVPDLVRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMK 696
I+ + R +K+G P D + Q + L C +P RP
Sbjct: 306 ID-EEFCRRLKEGTRMRAP--DYTTPEMYQTM-------------LDCWHGEPSQRPTFS 349
Query: 697 NVSENL 702
+ E+L
Sbjct: 350 ELVEHL 355
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 87/219 (39%), Gaps = 30/219 (13%)
Query: 415 LGKSGLGIVYKVV---LGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVK---HPNIVKL 468
+G G VYK G+ + + R+ G E V EV + +++ HPN+V+L
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRL 71
Query: 469 RAYYWAPDEKLLISDFISNGNLANALRGR-NGQPSTSLSWSTRLRIAKGTARGLAYLHE- 526
I + ++ LR + P L T + + RGL +LH
Sbjct: 72 MDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHAN 131
Query: 527 CSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQ 586
C VH D+KP NIL+ + ++DFGL+R+ + + P +
Sbjct: 132 C----IVHRDLKPENILVTSGGTVKLADFGLARIYS-----------YQMALFPVV---- 172
Query: 587 TEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGK 625
T YRAPE + D++S G + E+ K
Sbjct: 173 --VTLWYRAPEVLLQSTY-ATPVDMWSVGCIFAEMFRRK 208
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 54/117 (46%), Gaps = 18/117 (15%)
Query: 512 RIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLS-RLINITGNNPSS 570
+IA + L +LH S +H D+KPSN+L++ Q DFG+S L++ + +
Sbjct: 140 KIAVSIVKALEHLH--SKLSVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDA 197
Query: 571 SGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
G PY P E+ N PE G K D++S G+ +EL + P
Sbjct: 198 ------GCKPYXAP---ERIN----PELNQKGYS--VKSDIWSLGITXIELAILRFP 239
>pdb|3B2D|A Chain A, Crystal Structure Of Human Rp105MD-1 Complex
pdb|3B2D|B Chain B, Crystal Structure Of Human Rp105MD-1 Complex
Length = 603
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 61/143 (42%), Gaps = 28/143 (19%)
Query: 142 RLQNLDLSNNSFSGSLPDGLKNCKQLQRLILARNKFSG--QIPAGIWPELE--------- 190
+LQ LDL+ G LP G+K L++L+L+ N F QI A +P L
Sbjct: 276 QLQELDLTATHLKG-LPSGMKGLNLLKKLVLSVNHFDQLCQISAANFPSLTHLYIRGNVK 334
Query: 191 -------------NLVQLDLSDNDFKGPIPNDLGELQSLS--ATLNLSYNHLSGKIPKSL 235
NL LDLS ND + L +L++LS TLNLS+N G ++
Sbjct: 335 KLHLGVGCLEKLGNLQTLDLSHNDIEASDCCSL-QLKNLSHLQTLNLSHNEPLGLQSQAF 393
Query: 236 GNLPVTVSFDLRGNNLSGEIPQT 258
P DL L PQ+
Sbjct: 394 KECPQLELLDLAFTRLHINAPQS 416
Score = 33.9 bits (76), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 49/133 (36%), Gaps = 26/133 (19%)
Query: 139 NLPRLQNLDLSNNSFSGSLPDGLKNCKQLQRLILARNKFSGQIPAGIWPELENLVQLDLS 198
NL LQ L+LS+N G K C QL+ L LA + P
Sbjct: 371 NLSHLQTLNLSHNEPLGLQSQAFKECPQLELLDLAFTRLHINAP---------------- 414
Query: 199 DNDFKGPIPNDLGELQSLSATLNLSYNHLSGKIPKSLGNLPVTVSFDLRGNNLS-GEIPQ 257
+ P N L LQ LNL+Y L L LPV +L+GN+ G I +
Sbjct: 415 ----QSPFQN-LHFLQ----VLNLTYCFLDTSNQHLLAGLPVLRHLNLKGNHFQDGTITK 465
Query: 258 TGSFANQGPTAFL 270
T G L
Sbjct: 466 TNLLQTVGSLEVL 478
>pdb|2V62|A Chain A, Structure Of Vaccinia-Related Kinase 2
pdb|2V62|B Chain B, Structure Of Vaccinia-Related Kinase 2
Length = 345
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 42/76 (55%), Gaps = 9/76 (11%)
Query: 494 LRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILL--DNDFQPY 551
+ G+NG + ST L++ L Y+HE ++VHGDIK +N+LL N Q Y
Sbjct: 141 ISGQNG----TFKKSTVLQLGIRMLDVLEYIHE---NEYVHGDIKAANLLLGYKNPDQVY 193
Query: 552 ISDFGLSRLINITGNN 567
++D+GLS GN+
Sbjct: 194 LADYGLSYRYCPNGNH 209
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 71/181 (39%), Gaps = 36/181 (19%)
Query: 451 VTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALR--GRNGQPSTSLSWS 508
+ E + + V P +VKL + ++ ++++ G + + LR GR +P
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF--- 145
Query: 509 TRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNP 568
A YLH ++ D+KP N+L+D ++DFG ++ + G
Sbjct: 146 ----YAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGRTW 196
Query: 569 SSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPG--NRPMQKWDVYSFGVVLLELLTGKS 626
+G T Y APE + N+ + W + GV++ E+ G
Sbjct: 197 XLAG-----------------TPEYLAPEIILSKGYNKAVDWW---ALGVLIYEMAAGYP 236
Query: 627 P 627
P
Sbjct: 237 P 237
>pdb|1W8A|A Chain A, Third Lrr Domain Of Drosophila Slit
Length = 192
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 41/86 (47%), Gaps = 2/86 (2%)
Query: 140 LPRLQNLDLSNNSFSGSLPDGLKNCKQLQRLILARNKFSGQIPAGIWPELENLVQLDLSD 199
LP L L+L N +G P+ + +Q L L NK +I ++ L L L+L D
Sbjct: 53 LPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIK-EISNKMFLGLHQLKTLNLYD 111
Query: 200 NDFKGPIPNDLGELQSLSATLNLSYN 225
N +P L SL+ +LNL+ N
Sbjct: 112 NQISCVMPGSFEHLNSLT-SLNLASN 136
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 71/181 (39%), Gaps = 36/181 (19%)
Query: 451 VTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALR--GRNGQPSTSLSWS 508
+ E + + V P +VKL + ++ ++++ G + + LR GR +P
Sbjct: 110 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF--- 166
Query: 509 TRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNP 568
A YLH ++ D+KP N+L+D ++DFG ++ + G
Sbjct: 167 ----YAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGATW 217
Query: 569 SSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPG--NRPMQKWDVYSFGVVLLELLTGKS 626
+ G T Y APE + N+ + W + GV++ E+ G
Sbjct: 218 TLCG-----------------TPEYLAPEIILSKGYNKAVDWW---ALGVLIYEMAAGYP 257
Query: 627 P 627
P
Sbjct: 258 P 258
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 70/181 (38%), Gaps = 36/181 (19%)
Query: 451 VTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALR--GRNGQPSTSLSWS 508
+ E + + V P +VKL + ++ ++++ G + + LR GR +P
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARF--- 145
Query: 509 TRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNP 568
A YLH ++ D+KP N+L+D ++DFG ++ + G
Sbjct: 146 ----YAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGRTW 196
Query: 569 SSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPG--NRPMQKWDVYSFGVVLLELLTGKS 626
G T Y APE + N+ + W + GV++ E+ G
Sbjct: 197 XLCG-----------------TPEYLAPEIILSKGYNKAVDWW---ALGVLIYEMAAGYP 236
Query: 627 P 627
P
Sbjct: 237 P 237
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 44/109 (40%), Gaps = 13/109 (11%)
Query: 532 FVHGDIKPSNILLDNDFQPY-ISDFGLS-----------RLINITGNNPSSSGGFMGGAL 579
VH D+KPSN L + + Y + DFGL+ + + S L
Sbjct: 138 IVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICL 197
Query: 580 PYMKPVQTEK-TNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
+ V T +RAPE D++S GV+ L LL+G+ P
Sbjct: 198 SRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYP 246
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 83/223 (37%), Gaps = 43/223 (19%)
Query: 421 GIVYKVVLGNGIPVAVRRLGEGGEQRH-----------REFVTEVQAIAKVKHPNIVKLR 469
G V V GIPVA++R+ + + E++ + HPNI+ LR
Sbjct: 36 GAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLR 95
Query: 470 AYYWAPDE----KLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLH 525
+ +E KL + + +LA + + +S GL LH
Sbjct: 96 DIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQR----IVISPQHIQYFMYHILLGLHVLH 151
Query: 526 ECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPV 585
E VH D+ P NILL ++ I DF L+R N
Sbjct: 152 EAG---VVHRDLHPGNILLADNNDITICDFNLAREDTADAN------------------- 189
Query: 586 QTEKTNN--YRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKS 626
+T + YRAPE + + D++S G V+ E+ K+
Sbjct: 190 KTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKA 232
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 70/181 (38%), Gaps = 36/181 (19%)
Query: 451 VTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALR--GRNGQPSTSLSWS 508
+ E + + V P +VKL + ++ ++++ G + + LR GR +P
Sbjct: 76 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF--- 132
Query: 509 TRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNP 568
A YLH ++ D+KP N+L+D ++DFG ++ + G
Sbjct: 133 ----YAAQIVLTFEYLHSLD---LIYRDLKPENLLIDEQGYIQVTDFGFAK--RVKGRTW 183
Query: 569 SSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPG--NRPMQKWDVYSFGVVLLELLTGKS 626
G T Y APE + N+ + W + GV++ E+ G
Sbjct: 184 XLCG-----------------TPEYLAPEIILSKGYNKAVDWW---ALGVLIYEMAAGYP 223
Query: 627 P 627
P
Sbjct: 224 P 224
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 77/202 (38%), Gaps = 44/202 (21%)
Query: 453 EVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRL- 511
E+ +++V+H NI+K + D N + ++G ++ R
Sbjct: 79 EIAILSRVEHANIIK-------------VLDIFENQGFFQLVMEKHGSGLDLFAFIDRHP 125
Query: 512 --------RIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINI 563
I + + YL + +H DIK NI++ DF + DFG + +
Sbjct: 126 RLDEPLASYIFRQLVSAVGYLR---LKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLE- 181
Query: 564 TGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT 623
G + G + Y P + N YR PE +++S GV L L+
Sbjct: 182 RGKLFYT----FCGTIEYCAP-EVLMGNPYRGPEL-----------EMWSLGVTLYTLVF 225
Query: 624 GKSP--ELSPTTSTSIEVPDLV 643
++P EL T +I P LV
Sbjct: 226 EENPFCELEETVEAAIHPPYLV 247
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 70/181 (38%), Gaps = 36/181 (19%)
Query: 451 VTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALR--GRNGQPSTSLSWS 508
+ E + + V P +VKL + ++ ++++ G + + LR GR +P
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF--- 145
Query: 509 TRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNP 568
A YLH ++ D+KP N+L+D ++DFG ++ + G
Sbjct: 146 ----YAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGRTW 196
Query: 569 SSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPG--NRPMQKWDVYSFGVVLLELLTGKS 626
G T Y APE + N+ + W + GV++ E+ G
Sbjct: 197 XLXG-----------------TPEYLAPEIILSKGYNKAVDWW---ALGVLIYEMAAGYP 236
Query: 627 P 627
P
Sbjct: 237 P 237
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 83/223 (37%), Gaps = 43/223 (19%)
Query: 421 GIVYKVVLGNGIPVAVRRLGEGGEQRH-----------REFVTEVQAIAKVKHPNIVKLR 469
G V V GIPVA++R+ + + E++ + HPNI+ LR
Sbjct: 36 GAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLR 95
Query: 470 AYYWAPDE----KLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLH 525
+ +E KL + + +LA + + +S GL LH
Sbjct: 96 DIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQR----IVISPQHIQYFMYHILLGLHVLH 151
Query: 526 ECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPV 585
E VH D+ P NILL ++ I DF L+R N
Sbjct: 152 EAG---VVHRDLHPGNILLADNNDITICDFNLAREDTADAN------------------- 189
Query: 586 QTEKTNN--YRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKS 626
+T + YRAPE + + D++S G V+ E+ K+
Sbjct: 190 KTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKA 232
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 70/181 (38%), Gaps = 36/181 (19%)
Query: 451 VTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALR--GRNGQPSTSLSWS 508
+ E + + V P +VKL + ++ ++++ G + + LR GR +P
Sbjct: 90 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF--- 146
Query: 509 TRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNP 568
A YLH ++ D+KP N+L+D ++DFG ++ + G
Sbjct: 147 ----YAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGRTW 197
Query: 569 SSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPG--NRPMQKWDVYSFGVVLLELLTGKS 626
G T Y APE + N+ + W + GV++ E+ G
Sbjct: 198 XLCG-----------------TPEYLAPEIILSKGYNKAVDWW---ALGVLIYEMAAGYP 237
Query: 627 P 627
P
Sbjct: 238 P 238
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 70/181 (38%), Gaps = 36/181 (19%)
Query: 451 VTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALR--GRNGQPSTSLSWS 508
+ E + + V P +VKL + ++ ++++ G + + LR GR +P
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF--- 145
Query: 509 TRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNP 568
A YLH ++ D+KP N+L+D ++DFG ++ + G
Sbjct: 146 ----YAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGRTW 196
Query: 569 SSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPG--NRPMQKWDVYSFGVVLLELLTGKS 626
G T Y APE + N+ + W + GV++ E+ G
Sbjct: 197 XLCG-----------------TPEYLAPEIILSKGYNKAVDWW---ALGVLIYEMAAGYP 236
Query: 627 P 627
P
Sbjct: 237 P 237
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 70/181 (38%), Gaps = 36/181 (19%)
Query: 451 VTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALR--GRNGQPSTSLSWS 508
+ E + + V P +VKL + ++ ++++ G + + LR GR +P
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF--- 145
Query: 509 TRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNP 568
A YLH ++ D+KP N+L+D ++DFG ++ + G
Sbjct: 146 ----YAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGRTW 196
Query: 569 SSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPG--NRPMQKWDVYSFGVVLLELLTGKS 626
G T Y APE + N+ + W + GV++ E+ G
Sbjct: 197 XLCG-----------------TPEYLAPEIILSKGYNKAVDWW---ALGVLIYEMAAGYP 236
Query: 627 P 627
P
Sbjct: 237 P 237
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 70/181 (38%), Gaps = 36/181 (19%)
Query: 451 VTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALR--GRNGQPSTSLSWS 508
+ E + + V P +VKL + ++ ++++ G + + LR GR +P
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF--- 145
Query: 509 TRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNP 568
A YLH ++ D+KP N+L+D ++DFG ++ + G
Sbjct: 146 ----YAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGRTW 196
Query: 569 SSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPG--NRPMQKWDVYSFGVVLLELLTGKS 626
G T Y APE + N+ + W + GV++ E+ G
Sbjct: 197 XLCG-----------------TPEYLAPEIILSKGYNKAVDWW---ALGVLIYEMAAGYP 236
Query: 627 P 627
P
Sbjct: 237 P 237
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 70/181 (38%), Gaps = 36/181 (19%)
Query: 451 VTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALR--GRNGQPSTSLSWS 508
+ E + + V P +VKL + ++ ++++ G + + LR GR +P
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF--- 145
Query: 509 TRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNP 568
A YLH ++ D+KP N+L+D ++DFG ++ + G
Sbjct: 146 ----YAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGRTW 196
Query: 569 SSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPG--NRPMQKWDVYSFGVVLLELLTGKS 626
G T Y APE + N+ + W + GV++ E+ G
Sbjct: 197 XLCG-----------------TPEYLAPEIILSKGYNKAVDWW---ALGVLIYEMAAGYP 236
Query: 627 P 627
P
Sbjct: 237 P 237
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 70/181 (38%), Gaps = 36/181 (19%)
Query: 451 VTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALR--GRNGQPSTSLSWS 508
+ E + + V P +VKL + ++ ++++ G + + LR GR +P
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF--- 145
Query: 509 TRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNP 568
A YLH ++ D+KP N+L+D ++DFG ++ + G
Sbjct: 146 ----YAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGRTW 196
Query: 569 SSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPG--NRPMQKWDVYSFGVVLLELLTGKS 626
G T Y APE + N+ + W + GV++ E+ G
Sbjct: 197 XLCG-----------------TPEYLAPEIILSKGYNKAVDWW---ALGVLIYEMAAGYP 236
Query: 627 P 627
P
Sbjct: 237 P 237
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 54/129 (41%), Gaps = 16/129 (12%)
Query: 502 STSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILL---DNDFQPYISDFGLS 558
S LS T L +A + ++H S F+H DIKP N L+ Q YI DFGL+
Sbjct: 97 SRKLSLKTVLMLADQMINRVEFVHSKS---FLHRDIKPDNFLMGLGRRANQVYIIDFGLA 153
Query: 559 RLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVL 618
+ T + +PY + T Y + + G ++ D+ S G VL
Sbjct: 154 KKYRDTSTHQH---------IPYRENKNLTGTARYASVNTHL-GIEQSRRDDLESLGYVL 203
Query: 619 LELLTGKSP 627
+ L G P
Sbjct: 204 MYFLRGSLP 212
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 70/181 (38%), Gaps = 36/181 (19%)
Query: 451 VTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALR--GRNGQPSTSLSWS 508
+ E + + V P +VKL + ++ ++++ G + + LR GR +P
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF--- 145
Query: 509 TRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNP 568
A YLH ++ D+KP N+L+D ++DFG ++ + G
Sbjct: 146 ----YAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGRTW 196
Query: 569 SSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPG--NRPMQKWDVYSFGVVLLELLTGKS 626
G T Y APE + N+ + W + GV++ E+ G
Sbjct: 197 XLCG-----------------TPEYLAPEIILSKGYNKAVDWW---ALGVLIYEMAAGYP 236
Query: 627 P 627
P
Sbjct: 237 P 237
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 70/181 (38%), Gaps = 36/181 (19%)
Query: 451 VTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALR--GRNGQPSTSLSWS 508
+ E + + V P +VKL + ++ ++++ G + + LR GR +P
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF--- 145
Query: 509 TRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNP 568
A YLH ++ D+KP N+L+D ++DFG ++ + G
Sbjct: 146 ----YAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGRTW 196
Query: 569 SSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPG--NRPMQKWDVYSFGVVLLELLTGKS 626
G T Y APE + N+ + W + GV++ E+ G
Sbjct: 197 XLCG-----------------TPEYLAPEIILSKGYNKAVDWW---ALGVLIYEMAAGYP 236
Query: 627 P 627
P
Sbjct: 237 P 237
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 70/181 (38%), Gaps = 36/181 (19%)
Query: 451 VTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALR--GRNGQPSTSLSWS 508
+ E + + V P +VKL + ++ ++++ G + + LR GR +P
Sbjct: 84 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF--- 140
Query: 509 TRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNP 568
A YLH ++ D+KP N+L+D ++DFG ++ + G
Sbjct: 141 ----YAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGRTW 191
Query: 569 SSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPG--NRPMQKWDVYSFGVVLLELLTGKS 626
G T Y APE + N+ + W + GV++ E+ G
Sbjct: 192 XLCG-----------------TPEYLAPEIILSKGYNKAVDWW---ALGVLIYEMAAGYP 231
Query: 627 P 627
P
Sbjct: 232 P 232
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/181 (20%), Positives = 70/181 (38%), Gaps = 36/181 (19%)
Query: 451 VTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALR--GRNGQPSTSLSWS 508
+ E + + V P +VKL + ++ ++++ G + + LR GR +P
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF--- 145
Query: 509 TRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNP 568
A YLH ++ D+KP N+++D ++DFG ++ + G
Sbjct: 146 ----YAAQIVLTFEYLHSLD---LIYRDLKPENLIIDQQGYIQVTDFGFAK--RVKGRTW 196
Query: 569 SSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPG--NRPMQKWDVYSFGVVLLELLTGKS 626
G T Y APE + N+ + W + GV++ E+ G
Sbjct: 197 XLCG-----------------TPEYLAPEIIISKGYNKAVDWW---ALGVLIYEMAAGYP 236
Query: 627 P 627
P
Sbjct: 237 P 237
>pdb|2R9U|A Chain A, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
pdb|2R9U|B Chain B, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
pdb|2R9U|C Chain C, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
pdb|2R9U|D Chain D, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
Length = 174
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Query: 144 QNLDLSNNSFSGSLPDGLKNCKQLQRLILARNKFSGQIPAGIWPELENLVQLDLSDNDFK 203
Q L L+NN + P + LQ+L NK + IP G++ +L L QLDL+DN K
Sbjct: 36 QRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTA-IPTGVFDKLTQLTQLDLNDNHLK 94
Query: 204 GPIPNDLGELQSLS 217
L+SL+
Sbjct: 95 SIPRGAFDNLKSLT 108
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 70/181 (38%), Gaps = 36/181 (19%)
Query: 451 VTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALR--GRNGQPSTSLSWS 508
+ E + + V P +VKL + ++ +++ G + + LR GR +P
Sbjct: 75 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF--- 131
Query: 509 TRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNP 568
A YLH ++ D+KP N+L+D ++DFG ++ + G
Sbjct: 132 ----YAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGRTW 182
Query: 569 SSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPG--NRPMQKWDVYSFGVVLLELLTGKS 626
+ G T Y APE + N+ + W + GV++ E+ G
Sbjct: 183 TLCG-----------------TPEYLAPEIILSKGYNKAVDWW---ALGVLIYEMAAGYP 222
Query: 627 P 627
P
Sbjct: 223 P 223
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 79/207 (38%), Gaps = 30/207 (14%)
Query: 429 GNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNG 488
G I A +++ + + F E++ + + HPNI++L + + L+ + + G
Sbjct: 32 GTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGG 91
Query: 489 NLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILL--DN 546
L + + S RI K +AY H+ + H D+KP N L D+
Sbjct: 92 ELFERVVHKR-----VFRESDAARIMKDVLSAVAYCHKLN---VAHRDLKPENFLFLTDS 143
Query: 547 DFQPY-ISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRP 605
P + DFGL+ P G Y+ P E PE
Sbjct: 144 PDSPLKLIDFGLAARF-----KPGKMMRTKVGTPYYVSPQVLE---GLYGPEC------- 188
Query: 606 MQKWDVYSFGVVLLELLTGKSPELSPT 632
D +S GV++ LL G P +PT
Sbjct: 189 ----DEWSAGVMMYVLLCGYPPFSAPT 211
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 70/181 (38%), Gaps = 36/181 (19%)
Query: 451 VTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALR--GRNGQPSTSLSWS 508
+ E + + V P +VKL + ++ ++++ G + + LR GR +P
Sbjct: 110 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF--- 166
Query: 509 TRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNP 568
A YLH ++ D+KP N+L+D ++DFG ++ + G
Sbjct: 167 ----YAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGRTW 217
Query: 569 SSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPG--NRPMQKWDVYSFGVVLLELLTGKS 626
G T Y APE + N+ + W + GV++ E+ G
Sbjct: 218 XLCG-----------------TPEYLAPEIILSKGYNKAVDWW---ALGVLIYEMAAGYP 257
Query: 627 P 627
P
Sbjct: 258 P 258
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/121 (22%), Positives = 54/121 (44%), Gaps = 5/121 (4%)
Query: 444 EQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLAN---ALRGRNGQ 500
+ ++ +F E+Q I +K+ + DE +I +++ N ++ +
Sbjct: 84 KSKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKN 143
Query: 501 PSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRL 560
+ + I K +Y+H + + H D+KPSNIL+D + + +SDFG S
Sbjct: 144 YTCFIPIQVIKCIIKSVLNSFSYIH--NEKNICHRDVKPSNILMDKNGRVKLSDFGESEY 201
Query: 561 I 561
+
Sbjct: 202 M 202
>pdb|3RFS|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
pdb|3RFS|B Chain B, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
Length = 272
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 47/90 (52%), Gaps = 5/90 (5%)
Query: 117 TSLHSIFLYGNNLSGSLPPSVCN-LPRLQNLDLSNNSFSGSLPDGL-KNCKQLQRLILAR 174
T+L + L GN L SLP V + L L+ L L N SLPDG+ L L LA
Sbjct: 85 TNLTYLILTGNQLQ-SLPNGVFDKLTNLKELVLVENQLQ-SLPDGVFDKLTNLTYLNLAH 142
Query: 175 NKFSGQIPAGIWPELENLVQLDLSDNDFKG 204
N+ +P G++ +L NL +LDLS N +
Sbjct: 143 NQLQS-LPKGVFDKLTNLTELDLSYNQLQS 171
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 70/181 (38%), Gaps = 36/181 (19%)
Query: 451 VTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALR--GRNGQPSTSLSWS 508
+ E + + V P +VKL + ++ ++++ G + + LR GR +P
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF--- 145
Query: 509 TRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNP 568
A YLH ++ D+KP N+L+D ++DFG ++ + G
Sbjct: 146 ----YAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGRTW 196
Query: 569 SSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPG--NRPMQKWDVYSFGVVLLELLTGKS 626
G T Y APE + N+ + W + GV++ E+ G
Sbjct: 197 XLCG-----------------TPEYLAPEIILSKGYNKAVDWW---ALGVLIYEMAAGYP 236
Query: 627 P 627
P
Sbjct: 237 P 237
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 70/181 (38%), Gaps = 36/181 (19%)
Query: 451 VTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALR--GRNGQPSTSLSWS 508
+ E + + V P +VKL + ++ ++++ G + + LR GR +P
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF--- 145
Query: 509 TRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNP 568
A YLH ++ D+KP N+L+D ++DFG ++ + G
Sbjct: 146 ----YAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGRTW 196
Query: 569 SSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPG--NRPMQKWDVYSFGVVLLELLTGKS 626
G T Y APE + N+ + W + GV++ E+ G
Sbjct: 197 XLCG-----------------TPEYLAPEIILSKGYNKAVDWW---ALGVLIYEMAAGYP 236
Query: 627 P 627
P
Sbjct: 237 P 237
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 79/207 (38%), Gaps = 30/207 (14%)
Query: 429 GNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNG 488
G I A +++ + + F E++ + + HPNI++L + + L+ + + G
Sbjct: 49 GTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGG 108
Query: 489 NLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILL--DN 546
L + + S RI K +AY H+ + H D+KP N L D+
Sbjct: 109 ELFERVVHKR-----VFRESDAARIMKDVLSAVAYCHKLN---VAHRDLKPENFLFLTDS 160
Query: 547 DFQPY-ISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRP 605
P + DFGL+ P G Y+ P E PE
Sbjct: 161 PDSPLKLIDFGLAARF-----KPGKMMRTKVGTPYYVSPQVLE---GLYGPEC------- 205
Query: 606 MQKWDVYSFGVVLLELLTGKSPELSPT 632
D +S GV++ LL G P +PT
Sbjct: 206 ----DEWSAGVMMYVLLCGYPPFSAPT 228
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 70/181 (38%), Gaps = 36/181 (19%)
Query: 451 VTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALR--GRNGQPSTSLSWS 508
+ E + + V P +VKL + ++ +++ G + + LR GR +P
Sbjct: 90 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF--- 146
Query: 509 TRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNP 568
A YLH ++ D+KP N+L+D ++DFG ++ + G
Sbjct: 147 ----YAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGRTW 197
Query: 569 SSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPG--NRPMQKWDVYSFGVVLLELLTGKS 626
+ G T Y APE + N+ + W + GV++ E+ G
Sbjct: 198 TLCG-----------------TPEYLAPEIILSKGYNKAVDWW---ALGVLIYEMAAGYP 237
Query: 627 P 627
P
Sbjct: 238 P 238
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 76/183 (41%), Gaps = 25/183 (13%)
Query: 453 EVQAIAKVKHPNIVKLRAY--YWAPDEKLLISDFISNGNLANALRGRNGQPSTS--LSWS 508
E + + K+ H NIVKL A K+LI +F G+L L +PS + L S
Sbjct: 57 EFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLE----EPSNAYGLPES 112
Query: 509 TRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNIL--LDNDFQPY--ISDFGLSRLINIT 564
L + + G+ +L E VH +IKP NI+ + D Q ++DFG +R +
Sbjct: 113 EFLIVLRDVVGGMNHLRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDD 169
Query: 565 GNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTG 624
S + G Y+ P E RA + + D++S GV TG
Sbjct: 170 EQFVS-----LYGTEEYLHPDMYE-----RAVLRKDHQKKYGATVDLWSIGVTFYHAATG 219
Query: 625 KSP 627
P
Sbjct: 220 SLP 222
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 76/185 (41%), Gaps = 25/185 (13%)
Query: 451 VTEVQAIAKVKHPNIVKLRAY--YWAPDEKLLISDFISNGNLANALRGRNGQPSTS--LS 506
+ E + + K+ H NIVKL A K+LI +F G+L L +PS + L
Sbjct: 55 MREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLE----EPSNAYGLP 110
Query: 507 WSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNIL--LDNDFQPY--ISDFGLSRLIN 562
S L + + G+ +L E VH +IKP NI+ + D Q ++DFG +R +
Sbjct: 111 ESEFLIVLRDVVGGMNHLRE---NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAREL- 166
Query: 563 ITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELL 622
+ G Y+ P E RA + + D++S GV
Sbjct: 167 ----EDDEQFVXLYGTEEYLHPDMYE-----RAVLRKDHQKKYGATVDLWSIGVTFYHAA 217
Query: 623 TGKSP 627
TG P
Sbjct: 218 TGSLP 222
>pdb|3T6Q|A Chain A, Crystal Structure Of Mouse Rp105MD-1 Complex
pdb|3T6Q|B Chain B, Crystal Structure Of Mouse Rp105MD-1 Complex
Length = 606
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 53/109 (48%), Gaps = 28/109 (25%)
Query: 143 LQNLDLSNNSFSGSLPDGLKNCKQLQRLILARNKFSG--QIPAGIWPEL----------- 189
LQ LDL+ S LP GL L++L+L+ NKF QI A +P L
Sbjct: 280 LQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKR 338
Query: 190 -----------ENLVQLDLSDNDFKGPIPNDLGELQSLS--ATLNLSYN 225
ENL +LDLS +D + +L +L++LS +LNLSYN
Sbjct: 339 LELGTGCLENLENLRELDLSHDDIETSDCCNL-QLRNLSHLQSLNLSYN 386
Score = 33.9 bits (76), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 55/113 (48%), Gaps = 6/113 (5%)
Query: 140 LPRLQNLDLSNNSF-SGSL--PDGLKNCKQLQRLILARNKFSGQIPAGIWPELENLVQLD 196
LP LQ+L+L N F G++ + L+ +L+ L+L+ S I + L+ + +D
Sbjct: 448 LPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSS-IDQHAFTSLKMMNHVD 506
Query: 197 LSDNDFKGPIPNDLGELQSLSATLNLSYNHLSGKIPKSLGNLPVTVSFDLRGN 249
LS N L L+ + LNL+ NH+S +P L L + +LR N
Sbjct: 507 LSHNRLTSSSIEALSHLKGI--YLNLASNHISIILPSLLPILSQQRTINLRQN 557
Score = 29.3 bits (64), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 49/133 (36%), Gaps = 26/133 (19%)
Query: 139 NLPRLQNLDLSNNSFSGSLPDGLKNCKQLQRLILARNKFSGQIPAGIWPELENLVQLDLS 198
NL LQ+L+LS N + K C QL+ L LA + L
Sbjct: 374 NLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTR--------------------LK 413
Query: 199 DNDFKGPIPNDLGELQSLSATLNLSYNHLSGKIPKSLGNLPVTVSFDLRGNNL-SGEIPQ 257
D + P N L LNLS++ L + LP +L+GN+ G I +
Sbjct: 414 VKDAQSPFQN-----LHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQK 468
Query: 258 TGSFANQGPTAFL 270
T S G L
Sbjct: 469 TNSLQTLGRLEIL 481
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 71/177 (40%), Gaps = 24/177 (13%)
Query: 451 VTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGR-NGQPSTSLSWST 509
V ++ + +HPN+V+L I + ++ LR + P L T
Sbjct: 62 VALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAET 121
Query: 510 RLRIAKGTARGLAYLHE-CSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNP 568
+ + RGL +LH C VH D+KP NIL+ + ++DFGL+R+ +
Sbjct: 122 IKDLMRQFLRGLDFLHANC----IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA-- 175
Query: 569 SSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGK 625
+ PV T YRAPE + D++S G + E+ K
Sbjct: 176 -------------LTPVVV--TLWYRAPEVLLQSTY-ATPVDMWSVGCIFAEMFRRK 216
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/113 (22%), Positives = 49/113 (43%), Gaps = 12/113 (10%)
Query: 451 VTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALR--GRNGQPSTSLSWS 508
+ E + + V P +VKL + ++ ++++ G + + LR GR +P
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF--- 145
Query: 509 TRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLI 561
A YLH ++ D+KP N+L+D ++DFG ++ +
Sbjct: 146 ----YAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/113 (22%), Positives = 49/113 (43%), Gaps = 12/113 (10%)
Query: 451 VTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALR--GRNGQPSTSLSWS 508
+ E + + V P +VKL + ++ ++++ G + + LR GR +P
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF--- 145
Query: 509 TRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLI 561
A YLH ++ D+KP N+L+D ++DFG ++ +
Sbjct: 146 ----YAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/113 (22%), Positives = 49/113 (43%), Gaps = 12/113 (10%)
Query: 451 VTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALR--GRNGQPSTSLSWS 508
+ E + + V P +VKL + ++ ++++ G + + LR GR +P
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF--- 145
Query: 509 TRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLI 561
A YLH ++ D+KP N+L+D ++DFG ++ +
Sbjct: 146 ----YAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 69/181 (38%), Gaps = 36/181 (19%)
Query: 451 VTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALR--GRNGQPSTSLSWS 508
+ E + + V P +VKL + ++ +++ G + + LR GR +P
Sbjct: 82 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF--- 138
Query: 509 TRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNP 568
A YLH ++ D+KP N+L+D ++DFG ++ + G
Sbjct: 139 ----YAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGRTW 189
Query: 569 SSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPG--NRPMQKWDVYSFGVVLLELLTGKS 626
G T Y APE + N+ + W + GV++ E+ G
Sbjct: 190 XLCG-----------------TPEYLAPEIILSKGYNKAVDWW---ALGVLIYEMAAGYP 229
Query: 627 P 627
P
Sbjct: 230 P 230
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 69/181 (38%), Gaps = 36/181 (19%)
Query: 451 VTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALR--GRNGQPSTSLSWS 508
+ E + + V P +VKL + ++ +++ G + + LR GR +P
Sbjct: 89 LNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF--- 145
Query: 509 TRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNP 568
A YLH ++ D+KP N+L+D ++DFG ++ + G
Sbjct: 146 ----YAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGRTW 196
Query: 569 SSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPG--NRPMQKWDVYSFGVVLLELLTGKS 626
G T Y APE + N+ + W + GV++ E+ G
Sbjct: 197 XLCG-----------------TPEYLAPEIILSKGYNKAVDWW---ALGVLIYEMAAGYP 236
Query: 627 P 627
P
Sbjct: 237 P 237
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 69/181 (38%), Gaps = 36/181 (19%)
Query: 451 VTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALR--GRNGQPSTSLSWS 508
+ E + + V P +VKL + ++ +++ G + + LR GR +P
Sbjct: 89 LNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF--- 145
Query: 509 TRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNP 568
A YLH ++ D+KP N+L+D ++DFG ++ + G
Sbjct: 146 ----YAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGRTW 196
Query: 569 SSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPG--NRPMQKWDVYSFGVVLLELLTGKS 626
G T Y APE + N+ + W + GV++ E+ G
Sbjct: 197 XLCG-----------------TPEYLAPEIILSKGYNKAVDWW---ALGVLIYEMAAGYP 236
Query: 627 P 627
P
Sbjct: 237 P 237
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 69/181 (38%), Gaps = 36/181 (19%)
Query: 451 VTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALR--GRNGQPSTSLSWS 508
+ E + + V P +VKL + ++ +++ G + + LR GR +P
Sbjct: 89 LNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF--- 145
Query: 509 TRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNP 568
A YLH ++ D+KP N+L+D ++DFG ++ + G
Sbjct: 146 ----YAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGRTW 196
Query: 569 SSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPG--NRPMQKWDVYSFGVVLLELLTGKS 626
G T Y APE + N+ + W + GV++ E+ G
Sbjct: 197 XLCG-----------------TPEYLAPEIILSKGYNKAVDWW---ALGVLIYEMAAGYP 236
Query: 627 P 627
P
Sbjct: 237 P 237
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 69/181 (38%), Gaps = 36/181 (19%)
Query: 451 VTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALR--GRNGQPSTSLSWS 508
+ E + + V P +VKL + ++ +++ G + + LR GR +P
Sbjct: 90 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF--- 146
Query: 509 TRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNP 568
A YLH ++ D+KP N+L+D ++DFG ++ + G
Sbjct: 147 ----YAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGRTW 197
Query: 569 SSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPG--NRPMQKWDVYSFGVVLLELLTGKS 626
G T Y APE + N+ + W + GV++ E+ G
Sbjct: 198 XLCG-----------------TPEYLAPEIILSKGYNKAVDWW---ALGVLIYEMAAGYP 237
Query: 627 P 627
P
Sbjct: 238 P 238
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 69/181 (38%), Gaps = 36/181 (19%)
Query: 451 VTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALR--GRNGQPSTSLSWS 508
+ E + + V P +VKL + ++ +++ G + + LR GR +P
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF--- 145
Query: 509 TRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNP 568
A YLH ++ D+KP N+L+D ++DFG ++ + G
Sbjct: 146 ----YAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGRTW 196
Query: 569 SSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPG--NRPMQKWDVYSFGVVLLELLTGKS 626
G T Y APE + N+ + W + GV++ E+ G
Sbjct: 197 XLCG-----------------TPEYLAPEIILSKGYNKAVDWW---ALGVLIYEMAAGYP 236
Query: 627 P 627
P
Sbjct: 237 P 237
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 69/181 (38%), Gaps = 36/181 (19%)
Query: 451 VTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALR--GRNGQPSTSLSWS 508
+ E + + V P +VKL + ++ +++ G + + LR GR +P
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF--- 145
Query: 509 TRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNP 568
A YLH ++ D+KP N+L+D ++DFG ++ + G
Sbjct: 146 ----YAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGRTW 196
Query: 569 SSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPG--NRPMQKWDVYSFGVVLLELLTGKS 626
G T Y APE + N+ + W + GV++ E+ G
Sbjct: 197 XLCG-----------------TPEYLAPEIILSKGYNKAVDWW---ALGVLIYEMAAGYP 236
Query: 627 P 627
P
Sbjct: 237 P 237
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 69/181 (38%), Gaps = 36/181 (19%)
Query: 451 VTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALR--GRNGQPSTSLSWS 508
+ E + + V P +VKL + ++ +++ G + + LR GR +P
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF--- 145
Query: 509 TRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNP 568
A YLH ++ D+KP N+L+D ++DFG ++ + G
Sbjct: 146 ----YAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGRTW 196
Query: 569 SSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPG--NRPMQKWDVYSFGVVLLELLTGKS 626
G T Y APE + N+ + W + GV++ E+ G
Sbjct: 197 XLCG-----------------TPEYLAPEIILSKGYNKAVDWW---ALGVLIYEMAAGYP 236
Query: 627 P 627
P
Sbjct: 237 P 237
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 69/181 (38%), Gaps = 36/181 (19%)
Query: 451 VTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALR--GRNGQPSTSLSWS 508
+ E + + V P +VKL + ++ +++ G + + LR GR +P
Sbjct: 110 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF--- 166
Query: 509 TRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNP 568
A YLH ++ D+KP N+L+D ++DFG ++ + G
Sbjct: 167 ----YAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGRTW 217
Query: 569 SSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPG--NRPMQKWDVYSFGVVLLELLTGKS 626
G T Y APE + N+ + W + GV++ E+ G
Sbjct: 218 XLCG-----------------TPEYLAPEIILSKGYNKAVDWW---ALGVLIYEMAAGYP 257
Query: 627 P 627
P
Sbjct: 258 P 258
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 69/181 (38%), Gaps = 36/181 (19%)
Query: 451 VTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALR--GRNGQPSTSLSWS 508
+ E + + V P +VKL + ++ +++ G + + LR GR +P
Sbjct: 90 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF--- 146
Query: 509 TRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNP 568
A YLH ++ D+KP N+L+D ++DFG ++ + G
Sbjct: 147 ----YAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGRTW 197
Query: 569 SSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPG--NRPMQKWDVYSFGVVLLELLTGKS 626
G T Y APE + N+ + W + GV++ E+ G
Sbjct: 198 XLCG-----------------TPEYLAPEIILSKGYNKAVDWW---ALGVLIYEMAAGYP 237
Query: 627 P 627
P
Sbjct: 238 P 238
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 69/181 (38%), Gaps = 36/181 (19%)
Query: 451 VTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALR--GRNGQPSTSLSWS 508
+ E + + V P +VKL + ++ +++ G + + LR GR +P
Sbjct: 90 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF--- 146
Query: 509 TRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNP 568
A YLH ++ D+KP N+L+D ++DFG ++ + G
Sbjct: 147 ----YAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGRTW 197
Query: 569 SSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPG--NRPMQKWDVYSFGVVLLELLTGKS 626
G T Y APE + N+ + W + GV++ E+ G
Sbjct: 198 XLCG-----------------TPEYLAPEIILSKGYNKAVDWW---ALGVLIYEMAAGYP 237
Query: 627 P 627
P
Sbjct: 238 P 238
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 69/181 (38%), Gaps = 36/181 (19%)
Query: 451 VTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALR--GRNGQPSTSLSWS 508
+ E + + V P +VKL + ++ +++ G + + LR GR +P
Sbjct: 90 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF--- 146
Query: 509 TRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNP 568
A YLH ++ D+KP N+L+D ++DFG ++ + G
Sbjct: 147 ----YAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGRTW 197
Query: 569 SSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPG--NRPMQKWDVYSFGVVLLELLTGKS 626
G T Y APE + N+ + W + GV++ E+ G
Sbjct: 198 XLCG-----------------TPEYLAPEIILSKGYNKAVDWW---ALGVLIYEMAAGYP 237
Query: 627 P 627
P
Sbjct: 238 P 238
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 70/181 (38%), Gaps = 36/181 (19%)
Query: 451 VTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALR--GRNGQPSTSLSWS 508
+ E + + V P +VKL + ++ +++ G++ + LR GR +P
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARF--- 145
Query: 509 TRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNP 568
A YLH ++ D+KP N+L+D ++DFG ++ + G
Sbjct: 146 ----YAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIKVADFGFAK--RVKGRTW 196
Query: 569 SSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPG--NRPMQKWDVYSFGVVLLELLTGKS 626
G T Y APE + N+ + W + GV++ E+ G
Sbjct: 197 XLCG-----------------TPEYLAPEIILSKGYNKAVDWW---ALGVLIYEMAAGYP 236
Query: 627 P 627
P
Sbjct: 237 P 237
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 72/171 (42%), Gaps = 29/171 (16%)
Query: 461 KHPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARG 520
+HPNI+ L+ Y ++++ G L + + R S + + I K
Sbjct: 74 QHPNIITLKDVYDDGKYVYVVTELXKGGELLDKIL-RQKFFSEREASAVLFTITKT---- 128
Query: 521 LAYLHECSPRKFVHGDIKPSNIL-LDNDFQP---YISDFGLSRLINITGNNPSSSGGFMG 576
+ YLH + VH D+KPSNIL +D P I DFG ++ + + G +
Sbjct: 129 VEYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLR-------AENGLL- 177
Query: 577 GALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627
P T N+ APE + D++S GV+L LTG +P
Sbjct: 178 -----XTPCYTA---NFVAPEV-LERQGYDAACDIWSLGVLLYTXLTGYTP 219
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 69/181 (38%), Gaps = 36/181 (19%)
Query: 451 VTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALR--GRNGQPSTSLSWS 508
+ E + + V P +VKL + ++ +++ G + + LR GR +P
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF--- 145
Query: 509 TRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNP 568
A YLH ++ D+KP N+L+D ++DFG ++ + G
Sbjct: 146 ----YAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGRTW 196
Query: 569 SSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPG--NRPMQKWDVYSFGVVLLELLTGKS 626
G T Y APE + N+ + W + GV++ E+ G
Sbjct: 197 XLCG-----------------TPEYLAPEIILSKGYNKAVDWW---ALGVLIYEMAAGYP 236
Query: 627 P 627
P
Sbjct: 237 P 237
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 69/181 (38%), Gaps = 36/181 (19%)
Query: 451 VTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALR--GRNGQPSTSLSWS 508
+ E + + V P +VKL + ++ +++ G + + LR GR +P
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF--- 145
Query: 509 TRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNP 568
A YLH ++ D+KP N+L+D ++DFG ++ + G
Sbjct: 146 ----YAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIKVADFGFAK--RVKGRTW 196
Query: 569 SSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPG--NRPMQKWDVYSFGVVLLELLTGKS 626
G T Y APE + N+ + W + GV++ E+ G
Sbjct: 197 XLCG-----------------TPEYLAPEIILSKGYNKAVDWW---ALGVLIYEMAAGYP 236
Query: 627 P 627
P
Sbjct: 237 P 237
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 69/181 (38%), Gaps = 36/181 (19%)
Query: 451 VTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALR--GRNGQPSTSLSWS 508
+ E + + V P +VKL + ++ +++ G + + LR GR +P
Sbjct: 82 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF--- 138
Query: 509 TRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNP 568
A YLH ++ D+KP N+L+D ++DFG ++ + G
Sbjct: 139 ----YAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGRTW 189
Query: 569 SSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPG--NRPMQKWDVYSFGVVLLELLTGKS 626
G T Y APE + N+ + W + GV++ E+ G
Sbjct: 190 XLCG-----------------TPEYLAPEIILSKGYNKAVDWW---ALGVLIYEMAAGYP 229
Query: 627 P 627
P
Sbjct: 230 P 230
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 70/181 (38%), Gaps = 36/181 (19%)
Query: 451 VTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALR--GRNGQPSTSLSWS 508
+ E + + V P +VKL + ++ +++ G++ + LR GR +P
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARF--- 145
Query: 509 TRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNP 568
A YLH ++ D+KP N+L+D ++DFG ++ + G
Sbjct: 146 ----YAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIKVADFGFAK--RVKGRTW 196
Query: 569 SSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPG--NRPMQKWDVYSFGVVLLELLTGKS 626
G T Y APE + N+ + W + GV++ E+ G
Sbjct: 197 XLCG-----------------TPEYLAPEIILSKGYNKAVDWW---ALGVLIYEMAAGYP 236
Query: 627 P 627
P
Sbjct: 237 P 237
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 69/181 (38%), Gaps = 36/181 (19%)
Query: 451 VTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALR--GRNGQPSTSLSWS 508
+ E + + V P +VKL + ++ +++ G + + LR GR +P
Sbjct: 90 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF--- 146
Query: 509 TRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNP 568
A YLH ++ D+KP N+L+D ++DFG ++ + G
Sbjct: 147 ----YAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGRTW 197
Query: 569 SSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPG--NRPMQKWDVYSFGVVLLELLTGKS 626
G T Y APE + N+ + W + GV++ E+ G
Sbjct: 198 XLCG-----------------TPEYLAPEIILSKGYNKAVDWW---ALGVLIYEMAAGYP 237
Query: 627 P 627
P
Sbjct: 238 P 238
>pdb|3OP5|A Chain A, Human Vaccinia-Related Kinase 1
pdb|3OP5|B Chain B, Human Vaccinia-Related Kinase 1
pdb|3OP5|C Chain C, Human Vaccinia-Related Kinase 1
pdb|3OP5|D Chain D, Human Vaccinia-Related Kinase 1
Length = 364
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 28/40 (70%), Gaps = 5/40 (12%)
Query: 521 LAYLHECSPRKFVHGDIKPSNILLD--NDFQPYISDFGLS 558
L Y+HE ++VHGDIK SN+LL+ N Q Y+ D+GL+
Sbjct: 165 LEYIHE---HEYVHGDIKASNLLLNYKNPDQVYLVDYGLA 201
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 69/181 (38%), Gaps = 36/181 (19%)
Query: 451 VTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALR--GRNGQPSTSLSWS 508
+ E + + V P +VKL + ++ +++ G + + LR GR +P
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF--- 145
Query: 509 TRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNP 568
A YLH ++ D+KP N+L+D ++DFG ++ + G
Sbjct: 146 ----YAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGRTW 196
Query: 569 SSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPG--NRPMQKWDVYSFGVVLLELLTGKS 626
G T Y APE + N+ + W + GV++ E+ G
Sbjct: 197 XLCG-----------------TPEYLAPEIILSKGYNKAVDWW---ALGVLIYEMAAGYP 236
Query: 627 P 627
P
Sbjct: 237 P 237
>pdb|2KTY|A Chain A, Solution Structure Of Human Vaccinia Related Kinase-1
pdb|2KUL|A Chain A, Solution Structure Of Human Vaccinia Related Kinase
1(Vrk1)
Length = 368
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 35/59 (59%), Gaps = 5/59 (8%)
Query: 502 STSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLD--NDFQPYISDFGLS 558
+ S T L+++ L Y+HE ++VHGDIK SN+LL+ N Q Y+ D+GL+
Sbjct: 146 AKRFSRKTVLQLSLRILDILEYIHE---HEYVHGDIKASNLLLNYKNPDQVYLVDYGLA 201
>pdb|2LAV|A Chain A, Nmr Solution Structure Of Human Vaccinia-Related Kinase 1
Length = 361
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 35/59 (59%), Gaps = 5/59 (8%)
Query: 502 STSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLD--NDFQPYISDFGLS 558
+ S T L+++ L Y+HE ++VHGDIK SN+LL+ N Q Y+ D+GL+
Sbjct: 146 AKRFSRKTVLQLSLRILDILEYIHE---HEYVHGDIKASNLLLNYKNPDQVYLVDYGLA 201
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 111/292 (38%), Gaps = 74/292 (25%)
Query: 414 VLGKSGLGIVYK-VVLGNGIPVAVR-----RLGEGGEQRHREFV-TEVQAIAKVK--HPN 464
+LG G G VY + + + +PVA++ R+ + GE + V EV + KV
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 90
Query: 465 IVKLRAYYWAPDEKLLI----------SDFIS-NGNLANALRGRNGQPSTSLSWSTRLRI 513
+++L ++ PD +LI DFI+ G L L + S W
Sbjct: 91 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL-------ARSFFWQV---- 139
Query: 514 AKGTARGLAYLHECSPRKFVHGDIKPSNILLD-NDFQPYISDFGLSRLINITGNNPSSSG 572
+ + H C +H DIK NIL+D N + + DFG L+ T
Sbjct: 140 ----LEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYT----- 187
Query: 573 GFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP----- 627
F G + P + + + Y A V+S G++L +++ G P
Sbjct: 188 DFDGTRV--YSPPEWIRYHRYHGRSAA-----------VWSLGILLYDMVCGDIPFEHDE 234
Query: 628 -----ELSPTTSTSIEVPDLVRWV-------KKGFEEENPLSDMVDAMLLQE 667
++ S E L+RW + FEE M D +L QE
Sbjct: 235 EIIRGQVFFRQRVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQE 286
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 110/292 (37%), Gaps = 74/292 (25%)
Query: 414 VLGKSGLGIVYK-VVLGNGIPVAVR-----RLGEGGEQRHREFV-TEVQAIAKVK--HPN 464
+LG G G VY + + + +PVA++ R+ + GE + V EV + KV
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 465 IVKLRAYYWAPDEKLLI----------SDFIS-NGNLANALRGRNGQPSTSLSWSTRLRI 513
+++L ++ PD +LI DFI+ G L L + S W
Sbjct: 103 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL-------ARSFFWQV---- 151
Query: 514 AKGTARGLAYLHECSPRKFVHGDIKPSNILLD-NDFQPYISDFGLSRLINITGNNPSSSG 572
+ + H C +H DIK NIL+D N + + DFG L+ T
Sbjct: 152 ----LEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD---- 200
Query: 573 GFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP----- 627
G Y P + + + Y A V+S G++L +++ G P
Sbjct: 201 --FDGTRVYSPP-EWIRYHRYHGRSAA-----------VWSLGILLYDMVCGDIPFEHDE 246
Query: 628 -----ELSPTTSTSIEVPDLVRWV-------KKGFEEENPLSDMVDAMLLQE 667
++ S E L+RW + FEE M D +L QE
Sbjct: 247 EIIGGQVFFRQRVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQE 298
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 110/292 (37%), Gaps = 74/292 (25%)
Query: 414 VLGKSGLGIVYK-VVLGNGIPVAVR-----RLGEGGEQRHREFV-TEVQAIAKVK--HPN 464
+LG G G VY + + + +PVA++ R+ + GE + V EV + KV
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 465 IVKLRAYYWAPDEKLLI----------SDFIS-NGNLANALRGRNGQPSTSLSWSTRLRI 513
+++L ++ PD +LI DFI+ G L L + S W
Sbjct: 104 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL-------ARSFFWQV---- 152
Query: 514 AKGTARGLAYLHECSPRKFVHGDIKPSNILLD-NDFQPYISDFGLSRLINITGNNPSSSG 572
+ + H C +H DIK NIL+D N + + DFG L+ T
Sbjct: 153 ----LEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD---- 201
Query: 573 GFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP----- 627
G Y P + + + Y A V+S G++L +++ G P
Sbjct: 202 --FDGTRVYSPP-EWIRYHRYHGRSAA-----------VWSLGILLYDMVCGDIPFEHDE 247
Query: 628 -----ELSPTTSTSIEVPDLVRWV-------KKGFEEENPLSDMVDAMLLQE 667
++ S E L+RW + FEE M D +L QE
Sbjct: 248 EIIGGQVFFRQRVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQE 299
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 110/292 (37%), Gaps = 74/292 (25%)
Query: 414 VLGKSGLGIVYK-VVLGNGIPVAVR-----RLGEGGEQRHREFV-TEVQAIAKVK--HPN 464
+LG G G VY + + + +PVA++ R+ + GE + V EV + KV
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 465 IVKLRAYYWAPDEKLLI----------SDFIS-NGNLANALRGRNGQPSTSLSWSTRLRI 513
+++L ++ PD +LI DFI+ G L L + S W
Sbjct: 104 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL-------ARSFFWQV---- 152
Query: 514 AKGTARGLAYLHECSPRKFVHGDIKPSNILLD-NDFQPYISDFGLSRLINITGNNPSSSG 572
+ + H C +H DIK NIL+D N + + DFG L+ T
Sbjct: 153 ----LEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD---- 201
Query: 573 GFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP----- 627
G Y P + + + Y A V+S G++L +++ G P
Sbjct: 202 --FDGTRVYSPP-EWIRYHRYHGRSAA-----------VWSLGILLYDMVCGDIPFEHDE 247
Query: 628 -----ELSPTTSTSIEVPDLVRWV-------KKGFEEENPLSDMVDAMLLQE 667
++ S E L+RW + FEE M D +L QE
Sbjct: 248 EIIGGQVFFRQRVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQE 299
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 110/292 (37%), Gaps = 74/292 (25%)
Query: 414 VLGKSGLGIVYK-VVLGNGIPVAVR-----RLGEGGEQRHREFV-TEVQAIAKVK--HPN 464
+LG G G VY + + + +PVA++ R+ + GE + V EV + KV
Sbjct: 63 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 122
Query: 465 IVKLRAYYWAPDEKLLI----------SDFIS-NGNLANALRGRNGQPSTSLSWSTRLRI 513
+++L ++ PD +LI DFI+ G L L + S W
Sbjct: 123 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL-------ARSFFWQV---- 171
Query: 514 AKGTARGLAYLHECSPRKFVHGDIKPSNILLD-NDFQPYISDFGLSRLINITGNNPSSSG 572
+ + H C +H DIK NIL+D N + + DFG L+ T
Sbjct: 172 ----LEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD---- 220
Query: 573 GFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP----- 627
G Y P + + + Y A V+S G++L +++ G P
Sbjct: 221 --FDGTRVYSPP-EWIRYHRYHGRSAA-----------VWSLGILLYDMVCGDIPFEHDE 266
Query: 628 -----ELSPTTSTSIEVPDLVRWV-------KKGFEEENPLSDMVDAMLLQE 667
++ S E L+RW + FEE M D +L QE
Sbjct: 267 EIIRGQVFFRQRVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQE 318
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 111/292 (38%), Gaps = 74/292 (25%)
Query: 414 VLGKSGLGIVYK-VVLGNGIPVAVR-----RLGEGGEQRHREFV-TEVQAIAKVK--HPN 464
+LG G G VY + + + +PVA++ R+ + GE + V EV + KV
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 90
Query: 465 IVKLRAYYWAPDEKLLI----------SDFIS-NGNLANALRGRNGQPSTSLSWSTRLRI 513
+++L ++ PD +LI DFI+ G L L + S W
Sbjct: 91 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL-------ARSFFWQV---- 139
Query: 514 AKGTARGLAYLHECSPRKFVHGDIKPSNILLD-NDFQPYISDFGLSRLINITGNNPSSSG 572
+ + H C +H DIK NIL+D N + + DFG L+ T
Sbjct: 140 ----LEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYT----- 187
Query: 573 GFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP----- 627
F G + P + + + Y A V+S G++L +++ G P
Sbjct: 188 DFDGTRV--YSPPEWIRYHRYHGRSAA-----------VWSLGILLYDMVCGDIPFEHDE 234
Query: 628 -----ELSPTTSTSIEVPDLVRWV-------KKGFEEENPLSDMVDAMLLQE 667
++ S E L+RW + FEE M D +L QE
Sbjct: 235 EIIRGQVFFRQRVSXECQHLIRWCLALRPXDRPTFEEIQNHPWMQDVLLPQE 286
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 111/292 (38%), Gaps = 74/292 (25%)
Query: 414 VLGKSGLGIVYK-VVLGNGIPVAVR-----RLGEGGEQRHREFV-TEVQAIAKVK--HPN 464
+LG G G VY + + + +PVA++ R+ + GE + V EV + KV
Sbjct: 30 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 89
Query: 465 IVKLRAYYWAPDEKLLI----------SDFIS-NGNLANALRGRNGQPSTSLSWSTRLRI 513
+++L ++ PD +LI DFI+ G L L + S W
Sbjct: 90 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL-------ARSFFWQV---- 138
Query: 514 AKGTARGLAYLHECSPRKFVHGDIKPSNILLD-NDFQPYISDFGLSRLINITGNNPSSSG 572
+ + H C +H DIK NIL+D N + + DFG L+ T
Sbjct: 139 ----LEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYT----- 186
Query: 573 GFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP----- 627
F G + P + + + Y A V+S G++L +++ G P
Sbjct: 187 DFDGTRV--YSPPEWIRYHRYHGRSAA-----------VWSLGILLYDMVCGDIPFEHDE 233
Query: 628 -----ELSPTTSTSIEVPDLVRWV-------KKGFEEENPLSDMVDAMLLQE 667
++ S E L+RW + FEE M D +L QE
Sbjct: 234 EIIRGQVFFRQRVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQE 285
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 91/215 (42%), Gaps = 41/215 (19%)
Query: 415 LGKSGLGIVYKVVLGN--GIPVAVRRLGEGGEQRHREFVTEV-QAIAKVKHPNIVKLRAY 471
+ GLG +Y + N G PV ++ L G+ + Q +A+V HP+IV++ +
Sbjct: 88 IAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNF 147
Query: 472 YWAPDEK-----LLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHE 526
D ++ +++ +L + +G+ + ++++ + A L+YLH
Sbjct: 148 VEHTDRHGDPVGYIVMEYVGGQSLKRS-KGQKLPVAEAIAYLLEILPA------LSYLHS 200
Query: 527 CSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQ 586
V+ D+KP NI+L + Q + D G IN S G++ G
Sbjct: 201 IG---LVYNDLKPENIMLTEE-QLKLIDLGAVSRIN--------SFGYLYG--------- 239
Query: 587 TEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLEL 621
T ++APE G P D+Y+ G L L
Sbjct: 240 ---TPGFQAPEIVRTG--PTVATDIYTVGRTLAAL 269
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 69/181 (38%), Gaps = 36/181 (19%)
Query: 451 VTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALR--GRNGQPSTSLSWS 508
+ E + + V P +VKL + ++ ++ G + + LR GR +P
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF--- 145
Query: 509 TRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNP 568
A YLH ++ D+KP N+++D ++DFGL++ + G
Sbjct: 146 ----YAAQIVLTFEYLHSLD---LIYRDLKPENLMIDQQGYIQVTDFGLAK--RVKGRTW 196
Query: 569 SSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPG--NRPMQKWDVYSFGVVLLELLTGKS 626
G T Y APE + N+ + W + GV++ E+ G
Sbjct: 197 XLCG-----------------TPEYLAPEIILSKGYNKAVDWW---ALGVLIYEMAAGYP 236
Query: 627 P 627
P
Sbjct: 237 P 237
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 37.7 bits (86), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 110/292 (37%), Gaps = 74/292 (25%)
Query: 414 VLGKSGLGIVYK-VVLGNGIPVAVR-----RLGEGGEQRHREFV-TEVQAIAKVK--HPN 464
+LG G G VY + + + +PVA++ R+ + GE + V EV + KV
Sbjct: 58 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 117
Query: 465 IVKLRAYYWAPDEKLLI----------SDFIS-NGNLANALRGRNGQPSTSLSWSTRLRI 513
+++L ++ PD +LI DFI+ G L L + S W
Sbjct: 118 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL-------ARSFFWQV---- 166
Query: 514 AKGTARGLAYLHECSPRKFVHGDIKPSNILLD-NDFQPYISDFGLSRLINITGNNPSSSG 572
+ + H C +H DIK NIL+D N + + DFG L+ T
Sbjct: 167 ----LEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD---- 215
Query: 573 GFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP----- 627
G Y P + + + Y A V+S G++L +++ G P
Sbjct: 216 --FDGTRVYSPP-EWIRYHRYHGRSAA-----------VWSLGILLYDMVCGDIPFEHDE 261
Query: 628 -----ELSPTTSTSIEVPDLVRWV-------KKGFEEENPLSDMVDAMLLQE 667
++ S E L+RW + FEE M D +L QE
Sbjct: 262 EIIRGQVFFRQRVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQE 313
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 37.7 bits (86), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 109/292 (37%), Gaps = 74/292 (25%)
Query: 414 VLGKSGLGIVYK-VVLGNGIPVAVR-----RLGEGGEQRHREFV-TEVQAIAKVK--HPN 464
+LG G G VY + + + +PVA++ R+ + GE + V EV + KV
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 465 IVKLRAYYWAPDEKLLI----------SDFIS-NGNLANALRGRNGQPSTSLSWSTRLRI 513
+++L ++ PD +LI DFI+ G L L + S W
Sbjct: 71 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL-------ARSFFWQV---- 119
Query: 514 AKGTARGLAYLHECSPRKFVHGDIKPSNILLD-NDFQPYISDFGLSRLINITGNNPSSSG 572
L + C +H DIK NIL+D N + + DFG L+ T
Sbjct: 120 -------LEAVRHCHNXGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD---- 168
Query: 573 GFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP----- 627
G Y P + + + Y A V+S G++L +++ G P
Sbjct: 169 --FDGTRVYSPP-EWIRYHRYHGRSAA-----------VWSLGILLYDMVCGDIPFEHDE 214
Query: 628 -----ELSPTTSTSIEVPDLVRWV-------KKGFEEENPLSDMVDAMLLQE 667
++ S E L+RW + FEE M D +L QE
Sbjct: 215 EIIRGQVFFRQRVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQE 266
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 37.7 bits (86), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 104/258 (40%), Gaps = 30/258 (11%)
Query: 415 LGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWA 474
LG+ GIV++ V + + + + E+ + +H NI+ L + +
Sbjct: 13 LGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFES 72
Query: 475 PDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVH 534
+E ++I +FIS ++ R + L+ + L +LH H
Sbjct: 73 MEELVMIFEFISGLDIFE----RINTSAFELNEREIVSYVHQVCEALQFLH---SHNIGH 125
Query: 535 GDIKPSNILLDNDFQPYIS--DFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNN 592
DI+P NI+ I +FG +R + G+N L + P
Sbjct: 126 FDIRPENIIYQTRRSSTIKIIEFGQARQLK-PGDNFR---------LLFTAP-------E 168
Query: 593 YRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIE--VPDLVRWVKKGF 650
Y APE + D++S G ++ LL+G +P L+ T IE + + ++ F
Sbjct: 169 YYAPEVH-QHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAF 227
Query: 651 EEEN-PLSDMVDAMLLQE 667
+E + D VD +L++E
Sbjct: 228 KEISIEAMDFVDRLLVKE 245
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 69/181 (38%), Gaps = 36/181 (19%)
Query: 451 VTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALR--GRNGQPSTSLSWS 508
+ E + + V P +VKL + ++ ++ G + + LR GR +P
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF--- 145
Query: 509 TRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNP 568
A YLH ++ D+KP N+++D ++DFGL++ + G
Sbjct: 146 ----YAAQIVLTFEYLHSLD---LIYRDLKPENLMIDQQGYIKVTDFGLAK--RVKGRTW 196
Query: 569 SSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPG--NRPMQKWDVYSFGVVLLELLTGKS 626
G T Y APE + N+ + W + GV++ E+ G
Sbjct: 197 XLCG-----------------TPEYLAPEIILSKGYNKAVDWW---ALGVLIYEMAAGYP 236
Query: 627 P 627
P
Sbjct: 237 P 237
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 110/292 (37%), Gaps = 74/292 (25%)
Query: 414 VLGKSGLGIVYK-VVLGNGIPVAVR-----RLGEGGEQRHREFV-TEVQAIAKVK--HPN 464
+LG G G VY + + + +PVA++ R+ + GE + V EV + KV
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 465 IVKLRAYYWAPDEKLLI----------SDFIS-NGNLANALRGRNGQPSTSLSWSTRLRI 513
+++L ++ PD +LI DFI+ G L L + S W
Sbjct: 104 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL-------ARSFFWQV---- 152
Query: 514 AKGTARGLAYLHECSPRKFVHGDIKPSNILLD-NDFQPYISDFGLSRLINITGNNPSSSG 572
+ + H C +H DIK NIL+D N + + DFG L+ T
Sbjct: 153 ----LEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD---- 201
Query: 573 GFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP----- 627
G Y P + + + Y A V+S G++L +++ G P
Sbjct: 202 --FDGTRVYSPP-EWIRYHRYHGRSAA-----------VWSLGILLYDMVCGDIPFEHDE 247
Query: 628 -----ELSPTTSTSIEVPDLVRWV-------KKGFEEENPLSDMVDAMLLQE 667
++ S E L+RW + FEE M D +L QE
Sbjct: 248 EIIGGQVFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQE 299
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 110/292 (37%), Gaps = 74/292 (25%)
Query: 414 VLGKSGLGIVYK-VVLGNGIPVAVR-----RLGEGGEQRHREFV-TEVQAIAKVK--HPN 464
+LG G G VY + + + +PVA++ R+ + GE + V EV + KV
Sbjct: 38 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 97
Query: 465 IVKLRAYYWAPDEKLLI----------SDFIS-NGNLANALRGRNGQPSTSLSWSTRLRI 513
+++L ++ PD +LI DFI+ G L L + S W
Sbjct: 98 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL-------ARSFFWQV---- 146
Query: 514 AKGTARGLAYLHECSPRKFVHGDIKPSNILLD-NDFQPYISDFGLSRLINITGNNPSSSG 572
+ + H C +H DIK NIL+D N + + DFG L+ T
Sbjct: 147 ----LEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD---- 195
Query: 573 GFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP----- 627
G Y P + + + Y A V+S G++L +++ G P
Sbjct: 196 --FDGTRVYSPP-EWIRYHRYHGRSAA-----------VWSLGILLYDMVCGDIPFEHDE 241
Query: 628 -----ELSPTTSTSIEVPDLVRWV-------KKGFEEENPLSDMVDAMLLQE 667
++ S E L+RW + FEE M D +L QE
Sbjct: 242 EIIRGQVFFRQRVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQE 293
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.315 0.135 0.403
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,925,970
Number of Sequences: 62578
Number of extensions: 915927
Number of successful extensions: 3760
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 708
Number of HSP's successfully gapped in prelim test: 410
Number of HSP's that attempted gapping in prelim test: 1610
Number of HSP's gapped (non-prelim): 1311
length of query: 707
length of database: 14,973,337
effective HSP length: 106
effective length of query: 601
effective length of database: 8,340,069
effective search space: 5012381469
effective search space used: 5012381469
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 55 (25.8 bits)