Query 005226
Match_columns 707
No_of_seqs 705 out of 5381
Neff 9.1
Searched_HMMs 29240
Date Mon Mar 25 19:11:25 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005226.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/005226hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4aoj_A High affinity nerve gro 100.0 4.8E-54 1.6E-58 451.0 22.0 256 412-706 46-318 (329)
2 4asz_A BDNF/NT-3 growth factor 100.0 1.4E-54 4.8E-59 448.8 17.1 256 412-706 18-288 (299)
3 4gt4_A Tyrosine-protein kinase 100.0 6.4E-54 2.2E-58 445.8 21.0 256 412-706 31-305 (308)
4 3omv_A RAF proto-oncogene seri 100.0 4.4E-53 1.5E-57 437.6 20.7 255 412-706 41-299 (307)
5 3hmm_A TGF-beta receptor type- 100.0 2.4E-51 8.4E-56 427.3 18.3 269 413-706 9-296 (303)
6 3fpq_A Serine/threonine-protei 100.0 3.6E-50 1.2E-54 412.8 22.1 241 413-700 32-282 (290)
7 4fih_A Serine/threonine-protei 100.0 1.7E-50 5.9E-55 423.3 19.6 243 413-700 80-323 (346)
8 4ase_A Vascular endothelial gr 100.0 9.2E-51 3.2E-55 429.4 17.2 257 411-705 68-345 (353)
9 4g3f_A NF-kappa-beta-inducing 100.0 2.7E-50 9.4E-55 420.6 19.6 250 412-705 63-314 (336)
10 4b9d_A Serine/threonine-protei 100.0 1.8E-50 6.3E-55 423.8 16.6 244 413-700 30-276 (350)
11 4fie_A Serine/threonine-protei 100.0 3.5E-49 1.2E-53 423.6 22.5 243 413-700 157-400 (423)
12 3hyh_A Carbon catabolite-derep 100.0 7.5E-49 2.6E-53 399.4 21.7 240 413-700 19-262 (275)
13 4aw0_A HPDK1, 3-phosphoinositi 100.0 3.6E-49 1.2E-53 407.2 17.5 243 412-699 37-283 (311)
14 3ubd_A Ribosomal protein S6 ki 100.0 2.2E-48 7.6E-53 401.4 15.2 237 412-695 29-271 (304)
15 4g31_A Eukaryotic translation 100.0 3.9E-47 1.3E-51 393.7 22.0 256 412-700 10-279 (299)
16 4b99_A Mitogen-activated prote 100.0 3.4E-45 1.2E-49 393.6 23.4 259 413-700 60-344 (398)
17 4f9c_A Cell division cycle 7-r 100.0 1.4E-44 4.9E-49 384.6 19.7 207 412-631 26-250 (361)
18 3v5w_A G-protein coupled recep 100.0 2.1E-43 7.3E-48 395.1 22.2 243 412-699 194-448 (689)
19 2qkw_B Protein kinase; three-h 100.0 3E-43 1E-47 370.9 22.1 270 412-705 44-313 (321)
20 3uim_A Brassinosteroid insensi 100.0 3.3E-43 1.1E-47 371.5 17.5 285 401-705 19-309 (326)
21 3s95_A LIMK-1, LIM domain kina 100.0 5.5E-42 1.9E-46 359.4 25.5 266 412-706 15-281 (310)
22 3uto_A Twitchin; kinase, muscl 100.0 6.3E-43 2.1E-47 394.3 19.6 246 412-700 162-410 (573)
23 2psq_A Fibroblast growth facto 100.0 4.6E-42 1.6E-46 368.9 23.7 256 412-706 86-363 (370)
24 3soc_A Activin receptor type-2 100.0 1.6E-42 5.3E-47 365.6 18.4 264 412-706 29-317 (322)
25 4hcu_A Tyrosine-protein kinase 100.0 3E-42 1E-46 353.7 17.1 250 412-706 15-265 (269)
26 3kul_A Ephrin type-A receptor 100.0 6.5E-42 2.2E-46 361.3 18.5 252 412-705 54-311 (325)
27 3p86_A Serine/threonine-protei 100.0 2E-41 7E-46 354.8 21.8 251 412-705 42-296 (309)
28 2qol_A Ephrin receptor; recept 100.0 7.9E-42 2.7E-46 367.4 18.9 252 412-705 50-307 (373)
29 2nru_A Interleukin-1 receptor- 100.0 4.4E-41 1.5E-45 352.0 23.5 266 413-707 37-306 (307)
30 3fe3_A MAP/microtubule affinit 100.0 3.3E-41 1.1E-45 355.8 21.8 241 413-700 21-264 (328)
31 3sxs_A Cytoplasmic tyrosine-pr 100.0 8.6E-42 3E-46 350.0 16.9 251 412-707 13-264 (268)
32 3cbl_A C-FES, proto-oncogene t 100.0 3.9E-42 1.3E-46 370.7 14.8 252 412-706 119-373 (377)
33 3fxz_A Serine/threonine-protei 100.0 4.5E-41 1.5E-45 350.2 22.4 243 413-700 26-269 (297)
34 3zgw_A Maternal embryonic leuc 100.0 3E-41 1E-45 358.3 20.8 243 413-700 16-260 (347)
35 3q4u_A Activin receptor type-1 100.0 7.1E-41 2.4E-45 349.2 22.7 258 413-705 14-300 (301)
36 2c30_A Serine/threonine-protei 100.0 1.3E-40 4.3E-45 350.8 24.3 244 412-700 50-294 (321)
37 1qcf_A Haematopoetic cell kina 100.0 1.1E-41 3.6E-46 376.3 16.6 250 412-706 193-443 (454)
38 3tt0_A Basic fibroblast growth 100.0 6.1E-41 2.1E-45 362.1 22.1 255 412-705 74-350 (382)
39 3ugc_A Tyrosine-protein kinase 100.0 2.5E-41 8.4E-46 351.8 18.2 261 413-706 16-290 (295)
40 1opk_A P150, C-ABL, proto-onco 100.0 1.6E-41 5.6E-46 378.5 17.1 250 412-705 225-476 (495)
41 3gen_A Tyrosine-protein kinase 100.0 2.7E-41 9.3E-46 349.2 17.5 250 412-706 29-279 (283)
42 1k9a_A Carboxyl-terminal SRC k 100.0 6.8E-41 2.3E-45 369.3 21.4 245 412-706 198-444 (450)
43 3lb7_A RAF proto-oncogene seri 100.0 1.2E-40 4E-45 348.8 21.3 255 412-706 41-299 (307)
44 3l9p_A Anaplastic lymphoma kin 100.0 3.3E-41 1.1E-45 362.0 17.3 256 412-706 76-344 (367)
45 3poz_A Epidermal growth factor 100.0 6.5E-41 2.2E-45 354.0 18.5 250 413-706 21-277 (327)
46 3t9t_A Tyrosine-protein kinase 100.0 4.2E-41 1.4E-45 344.5 16.5 250 412-706 13-263 (267)
47 1luf_A Muscle-specific tyrosin 100.0 9.5E-41 3.2E-45 355.1 19.5 256 412-706 52-334 (343)
48 3vhe_A Vascular endothelial gr 100.0 5.5E-41 1.9E-45 359.3 17.2 257 412-706 27-354 (359)
49 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 4.5E-41 1.6E-45 370.9 16.9 249 412-705 189-438 (452)
50 1mp8_A Focal adhesion kinase 1 100.0 1.1E-40 3.6E-45 344.5 18.6 249 412-705 20-274 (281)
51 3tki_A Serine/threonine-protei 100.0 9.4E-41 3.2E-45 352.0 18.1 247 413-700 13-261 (323)
52 2ivs_A Proto-oncogene tyrosine 100.0 1E-40 3.5E-45 350.2 18.3 255 412-705 28-309 (314)
53 3niz_A Rhodanese family protei 100.0 6.8E-40 2.3E-44 343.6 24.4 258 413-700 27-300 (311)
54 4eqm_A Protein kinase; transfe 100.0 4.4E-40 1.5E-44 342.2 21.6 252 413-705 17-273 (294)
55 1t46_A HOMO sapiens V-KIT hard 100.0 2.7E-40 9.2E-45 346.8 20.1 256 412-705 28-305 (313)
56 1o6l_A RAC-beta serine/threoni 100.0 8.2E-40 2.8E-44 346.2 23.6 241 413-700 11-260 (337)
57 2yab_A Death-associated protei 100.0 6.7E-40 2.3E-44 350.1 22.5 245 412-700 17-272 (361)
58 3op5_A Serine/threonine-protei 100.0 3.6E-40 1.2E-44 353.8 20.5 264 413-705 41-327 (364)
59 3c1x_A Hepatocyte growth facto 100.0 1.9E-40 6.4E-45 356.3 18.2 253 412-705 94-353 (373)
60 2pvf_A Fibroblast growth facto 100.0 3.1E-40 1.1E-44 350.0 19.7 255 412-705 40-316 (334)
61 1rjb_A FL cytokine receptor; k 100.0 2.8E-40 9.4E-45 351.8 19.3 258 411-706 49-333 (344)
62 2eva_A TAK1 kinase - TAB1 chim 100.0 5.7E-40 2E-44 343.6 21.3 249 412-706 13-262 (307)
63 3qup_A Tyrosine-protein kinase 100.0 2.5E-40 8.6E-45 348.9 18.5 255 412-705 28-296 (323)
64 4f0f_A Serine/threonine-protei 100.0 9.5E-40 3.2E-44 338.4 22.3 246 413-705 25-287 (287)
65 3kex_A Receptor tyrosine-prote 100.0 1.9E-40 6.7E-45 350.1 17.4 250 413-706 19-275 (325)
66 2izr_A Casein kinase I isoform 100.0 5.8E-40 2E-44 347.3 21.0 258 413-705 15-279 (330)
67 3dtc_A Mitogen-activated prote 100.0 3.1E-40 1.1E-44 338.9 18.4 244 413-705 13-271 (271)
68 2ozo_A Tyrosine-protein kinase 100.0 4.3E-40 1.5E-44 375.7 21.4 249 414-705 343-596 (613)
69 3pls_A Macrophage-stimulating 100.0 7.6E-40 2.6E-44 340.9 21.3 254 412-705 26-285 (298)
70 1tki_A Titin; serine kinase, m 100.0 4.4E-40 1.5E-44 346.5 19.6 244 413-700 11-257 (321)
71 4fvq_A Tyrosine-protein kinase 100.0 7.8E-41 2.7E-45 346.8 13.3 246 412-706 13-274 (289)
72 4dc2_A Protein kinase C IOTA t 100.0 1.2E-39 4E-44 351.5 23.0 245 412-695 57-307 (396)
73 2y0a_A Death-associated protei 100.0 1.2E-39 4E-44 344.2 22.5 245 412-700 16-271 (326)
74 2bdw_A Hypothetical protein K1 100.0 1.2E-39 4E-44 349.0 22.4 245 412-700 34-284 (362)
75 1qpc_A LCK kinase; alpha beta 100.0 2.4E-40 8.2E-45 341.4 16.5 249 412-705 18-267 (279)
76 3kfa_A Tyrosine-protein kinase 100.0 2E-40 7E-45 343.5 15.9 250 412-705 18-269 (288)
77 3kmu_A ILK, integrin-linked ki 100.0 6E-40 2.1E-44 336.5 19.3 247 412-707 15-270 (271)
78 1csn_A Casein kinase-1; phosph 100.0 1.6E-39 5.6E-44 338.4 22.7 259 413-705 16-281 (298)
79 4euu_A Serine/threonine-protei 100.0 2E-39 6.8E-44 341.5 23.5 268 413-705 15-307 (319)
80 3og7_A AKAP9-BRAF fusion prote 100.0 9E-40 3.1E-44 339.0 20.5 254 413-706 30-287 (289)
81 3mdy_A Bone morphogenetic prot 100.0 1.2E-39 4E-44 345.7 21.6 262 412-706 42-330 (337)
82 1u59_A Tyrosine-protein kinase 100.0 9.1E-40 3.1E-44 338.6 20.3 249 414-705 17-270 (287)
83 2x4f_A Myosin light chain kina 100.0 5.6E-40 1.9E-44 352.8 19.2 245 413-700 95-342 (373)
84 4fr4_A YANK1, serine/threonine 100.0 1.5E-39 5E-44 349.5 22.2 243 413-699 21-270 (384)
85 3f66_A Hepatocyte growth facto 100.0 1.2E-39 4.3E-44 339.4 21.0 253 412-705 30-289 (298)
86 3gxj_A TGF-beta receptor type- 100.0 3.1E-41 1E-45 352.2 8.7 260 412-706 8-296 (303)
87 1ob3_A PFPK5, cell division co 100.0 7.5E-40 2.6E-44 339.5 18.8 258 413-700 8-280 (288)
88 2h8h_A Proto-oncogene tyrosine 100.0 1.1E-40 3.7E-45 375.3 13.5 249 412-705 272-521 (535)
89 4fl3_A Tyrosine-protein kinase 100.0 4.9E-40 1.7E-44 376.2 18.9 249 413-705 375-629 (635)
90 3a8x_A Protein kinase C IOTA t 100.0 3.3E-39 1.1E-43 343.0 23.8 244 413-695 15-264 (345)
91 3soa_A Calcium/calmodulin-depe 100.0 2.2E-39 7.6E-44 355.2 23.1 246 412-700 16-267 (444)
92 3h4j_B AMPK kdaid, SNF1-like p 100.0 5.6E-40 1.9E-44 347.2 17.6 240 413-700 15-258 (336)
93 1mqb_A Ephrin type-A receptor 100.0 1.3E-39 4.4E-44 345.0 20.4 252 412-705 49-307 (333)
94 2zv2_A Calcium/calmodulin-depe 100.0 9.1E-40 3.1E-44 340.5 18.9 243 413-700 19-292 (298)
95 3qd2_B Eukaryotic translation 100.0 1.2E-39 4E-44 344.7 19.9 256 412-700 11-325 (332)
96 3cc6_A Protein tyrosine kinase 100.0 1.1E-39 3.7E-44 336.9 19.0 249 412-705 17-271 (281)
97 3kn6_A Ribosomal protein S6 ki 100.0 1.5E-39 5E-44 343.2 20.2 249 413-700 17-270 (325)
98 3c0i_A Peripheral plasma membr 100.0 1.4E-39 4.7E-44 347.2 20.1 249 412-700 29-286 (351)
99 2i1m_A Macrophage colony-stimu 100.0 1.4E-39 4.6E-44 344.8 19.1 257 412-706 51-325 (333)
100 3uc3_A Serine/threonine-protei 100.0 9.8E-40 3.3E-44 349.6 18.0 246 413-700 26-274 (361)
101 3o0g_A Cell division protein k 100.0 2.5E-39 8.4E-44 336.2 20.4 259 413-700 8-282 (292)
102 3gni_B Strad alpha; kinase fol 100.0 2.5E-39 8.6E-44 350.5 21.2 205 413-632 31-241 (389)
103 4e5w_A Tyrosine-protein kinase 100.0 7.8E-40 2.7E-44 341.5 16.6 264 413-706 27-301 (302)
104 1xbb_A Tyrosine-protein kinase 100.0 1.1E-39 3.7E-44 338.8 17.5 248 414-705 24-277 (291)
105 3lzb_A Epidermal growth factor 100.0 1.3E-39 4.4E-44 344.0 18.3 250 413-706 21-277 (327)
106 1fot_A TPK1 delta, CAMP-depend 100.0 4.2E-39 1.4E-43 338.2 22.0 238 413-700 12-258 (318)
107 3p1a_A MYT1 kinase, membrane-a 100.0 2.7E-39 9.3E-44 339.1 20.5 239 412-700 62-304 (311)
108 3brb_A Proto-oncogene tyrosine 100.0 2.3E-39 7.7E-44 340.0 19.7 256 412-706 39-307 (313)
109 1kob_A Twitchin; kinase, intra 100.0 2E-39 6.9E-44 349.5 19.5 246 412-700 56-304 (387)
110 3txo_A PKC-L, NPKC-ETA, protei 100.0 1.4E-39 4.8E-44 346.7 18.1 236 413-695 29-269 (353)
111 3lxp_A Non-receptor tyrosine-p 100.0 1.1E-39 3.6E-44 343.4 17.0 262 413-706 37-309 (318)
112 3lxl_A Tyrosine-protein kinase 100.0 4.8E-40 1.7E-44 347.4 14.4 263 412-705 28-301 (327)
113 1b6c_B TGF-B superfamily recep 100.0 5.5E-39 1.9E-43 341.3 22.4 260 412-706 47-335 (342)
114 2pmi_A Negative RE, cyclin-dep 100.0 3.3E-39 1.1E-43 339.4 20.4 261 413-700 11-293 (317)
115 3a62_A Ribosomal protein S6 ki 100.0 7.4E-39 2.5E-43 338.2 22.6 241 413-700 23-276 (327)
116 2v62_A Serine/threonine-protei 100.0 2.4E-39 8.3E-44 344.7 18.9 263 413-705 43-326 (345)
117 1nxk_A MAP kinase-activated pr 100.0 6.4E-39 2.2E-43 347.9 22.4 245 413-700 68-321 (400)
118 1rdq_E PKA C-alpha, CAMP-depen 100.0 5.4E-39 1.8E-43 341.9 21.1 239 412-700 46-293 (350)
119 2xir_A Vascular endothelial gr 100.0 2.8E-39 9.6E-44 339.5 18.7 256 412-705 32-308 (316)
120 1xjd_A Protein kinase C, theta 100.0 2.9E-39 1E-43 342.9 18.8 240 413-699 23-268 (345)
121 1u5q_A Serine/threonine protei 100.0 2.7E-39 9.3E-44 344.2 18.6 241 412-700 59-305 (348)
122 2w4o_A Calcium/calmodulin-depe 100.0 6.5E-39 2.2E-43 341.7 21.6 243 413-700 59-305 (349)
123 2eue_A Carbon catabolite derep 100.0 5.5E-39 1.9E-43 330.5 20.3 240 413-700 19-262 (275)
124 3f3z_A Calcium/calmodulin-depe 100.0 5.7E-39 2E-43 330.7 20.4 244 412-700 14-261 (277)
125 3e7e_A HBUB1, BUB1A, mitotic c 100.0 1.9E-39 6.6E-44 348.2 17.4 246 413-705 71-337 (365)
126 2y94_A 5'-AMP-activated protei 100.0 5.8E-39 2E-43 354.2 21.5 241 413-700 22-266 (476)
127 1t4h_A Serine/threonine-protei 100.0 1E-38 3.4E-43 331.3 22.1 241 413-700 32-282 (290)
128 1p4o_A Insulin-like growth fac 100.0 2.8E-39 9.5E-44 340.7 18.1 255 412-705 30-297 (322)
129 2yex_A Serine/threonine-protei 100.0 7.5E-39 2.6E-43 329.5 20.9 248 412-700 12-261 (276)
130 2w1i_A JAK2; chromosomal rearr 100.0 1.8E-39 6.1E-44 342.9 16.5 262 412-706 46-321 (326)
131 3dbq_A Dual specificity protei 100.0 3.3E-39 1.1E-43 343.4 18.3 245 413-700 15-273 (343)
132 4aw2_A Serine/threonine-protei 100.0 1.3E-39 4.6E-44 355.6 15.7 249 412-700 79-338 (437)
133 1byg_A CSK, protein (C-termina 100.0 1.3E-39 4.6E-44 335.6 14.7 245 412-706 26-272 (278)
134 2zmd_A Dual specificity protei 100.0 5.2E-39 1.8E-43 347.5 19.9 245 413-700 62-320 (390)
135 3ork_A Serine/threonine protei 100.0 1.7E-39 5.9E-44 340.6 15.6 248 413-700 18-273 (311)
136 2buj_A Serine/threonine-protei 100.0 2.9E-39 9.8E-44 339.8 17.3 264 413-706 35-305 (317)
137 2wqm_A Serine/threonine-protei 100.0 8.7E-39 3E-43 335.1 20.7 256 412-706 37-296 (310)
138 3uzp_A CKI-delta, CKID, casein 100.0 1.8E-38 6.3E-43 330.1 23.0 259 413-705 15-278 (296)
139 4agu_A Cyclin-dependent kinase 100.0 1.2E-38 4.2E-43 334.0 21.7 254 413-700 9-284 (311)
140 4hgt_A Casein kinase I isoform 100.0 1.4E-38 4.9E-43 330.8 21.9 259 413-705 15-278 (296)
141 3v8s_A RHO-associated protein 100.0 2.2E-39 7.6E-44 351.2 16.2 246 412-700 74-329 (410)
142 2ac3_A MAP kinase-interacting 100.0 4.3E-39 1.5E-43 338.3 18.0 259 413-700 19-295 (316)
143 2a2a_A Death-associated protei 100.0 1.5E-38 5E-43 335.1 22.1 245 412-700 17-272 (321)
144 3llt_A Serine/threonine kinase 100.0 1.2E-38 4E-43 341.5 21.5 191 413-631 41-262 (360)
145 2jii_A Serine/threonine-protei 100.0 1E-38 3.5E-43 340.8 21.0 277 389-705 31-334 (352)
146 3is5_A Calcium-dependent prote 100.0 4.3E-39 1.5E-43 333.3 17.4 247 412-700 27-278 (285)
147 2yfx_A Tyrosine-protein kinase 100.0 5.2E-39 1.8E-43 339.5 18.1 254 413-705 36-302 (327)
148 2i0e_A Protein kinase C-beta I 100.0 1.3E-38 4.5E-43 339.0 21.3 236 413-695 26-266 (353)
149 1fvr_A Tyrosine-protein kinase 100.0 4.4E-39 1.5E-43 340.1 17.2 252 412-705 30-298 (327)
150 3rgf_A Cyclin-dependent kinase 100.0 3.5E-39 1.2E-43 351.2 16.9 210 404-632 18-240 (405)
151 3fdn_A Serine/threonine-protei 100.0 1.4E-38 4.9E-43 328.2 20.5 239 413-700 15-257 (279)
152 3hko_A Calcium/calmodulin-depe 100.0 6.9E-39 2.4E-43 341.1 18.7 256 412-700 31-330 (345)
153 3kk8_A Calcium/calmodulin depe 100.0 1.6E-38 5.4E-43 328.6 20.9 244 413-700 12-261 (284)
154 3g2f_A Bone morphogenetic prot 100.0 2.9E-39 9.9E-44 342.7 15.7 268 413-705 19-316 (336)
155 2h34_A Serine/threonine-protei 100.0 2.2E-38 7.7E-43 331.8 22.1 250 413-705 40-294 (309)
156 4eut_A Serine/threonine-protei 100.0 6E-39 2.1E-43 348.1 18.2 268 413-705 15-307 (396)
157 2a19_B Interferon-induced, dou 100.0 4.5E-39 1.5E-43 332.5 16.0 241 412-706 16-273 (284)
158 3dls_A PAS domain-containing s 100.0 2.4E-39 8.2E-44 343.0 14.2 237 412-701 29-275 (335)
159 2jam_A Calcium/calmodulin-depe 100.0 2E-38 6.8E-43 331.4 20.9 244 412-700 14-261 (304)
160 3oz6_A Mitogen-activated prote 100.0 1.3E-38 4.5E-43 344.7 20.0 209 413-631 15-234 (388)
161 3cok_A Serine/threonine-protei 100.0 2.3E-38 8E-43 326.3 20.9 242 413-700 17-262 (278)
162 3i6u_A CDS1, serine/threonine- 100.0 1.6E-38 5.4E-43 347.1 20.7 246 412-700 140-399 (419)
163 2vd5_A DMPK protein; serine/th 100.0 3.3E-39 1.1E-43 350.1 14.8 248 412-700 66-327 (412)
164 1vzo_A Ribosomal protein S6 ki 100.0 8.4E-39 2.9E-43 341.7 17.7 249 412-701 59-322 (355)
165 3mtl_A Cell division protein k 100.0 4.8E-39 1.6E-43 339.3 15.2 258 413-700 8-281 (324)
166 2acx_A G protein-coupled recep 100.0 1.4E-38 4.8E-43 355.8 19.7 247 412-700 189-444 (576)
167 1x8b_A WEE1HU, WEE1-like prote 100.0 2.4E-38 8.1E-43 327.5 20.0 241 412-700 16-279 (289)
168 3rp9_A Mitogen-activated prote 100.0 2.4E-38 8.2E-43 350.3 21.0 204 412-624 58-280 (458)
169 2r5t_A Serine/threonine-protei 100.0 1.5E-38 5.2E-43 340.9 18.8 244 412-702 43-291 (373)
170 3ttj_A Mitogen-activated prote 100.0 5.3E-38 1.8E-42 346.9 23.7 253 413-700 68-355 (464)
171 1cm8_A Phosphorylated MAP kina 100.0 3.5E-38 1.2E-42 338.3 21.6 251 413-700 31-307 (367)
172 2rku_A Serine/threonine-protei 100.0 5E-38 1.7E-42 326.6 22.2 241 413-700 21-265 (294)
173 3eqc_A Dual specificity mitoge 100.0 1.3E-38 4.6E-43 341.0 18.2 255 413-700 39-324 (360)
174 3mi9_A Cell division protein k 100.0 3.8E-38 1.3E-42 336.2 21.7 262 413-700 23-311 (351)
175 4ejn_A RAC-alpha serine/threon 100.0 1.1E-38 3.8E-43 351.6 17.8 243 412-700 153-404 (446)
176 2qr7_A Ribosomal protein S6 ki 100.0 1.6E-38 5.5E-43 337.3 18.3 245 412-700 27-277 (342)
177 3nsz_A CK II alpha, casein kin 100.0 4.5E-38 1.5E-42 332.7 21.6 250 413-700 42-319 (330)
178 3bhy_A Death-associated protei 100.0 3.5E-38 1.2E-42 325.8 20.3 245 412-700 10-265 (283)
179 2clq_A Mitogen-activated prote 100.0 3.1E-38 1.1E-42 328.1 20.0 248 413-700 28-278 (295)
180 2h6d_A 5'-AMP-activated protei 100.0 5.4E-38 1.8E-42 323.2 21.3 241 413-700 17-261 (276)
181 4aaa_A Cyclin-dependent kinase 100.0 2.8E-38 9.5E-43 334.5 19.3 258 413-700 31-306 (331)
182 3lm5_A Serine/threonine-protei 100.0 1.5E-38 5E-43 336.0 17.1 247 412-700 34-287 (327)
183 2owb_A Serine/threonine-protei 100.0 4.6E-38 1.6E-42 333.3 21.0 241 413-700 47-291 (335)
184 3gbz_A Kinase, CMGC CDK; ssgci 100.0 1.2E-38 4E-43 337.1 16.3 257 413-700 40-318 (329)
185 3a7i_A MST3 kinase, serine/thr 100.0 3.2E-38 1.1E-42 329.6 19.4 242 413-701 28-271 (303)
186 2y7j_A Phosphorylase B kinase 100.0 4.4E-38 1.5E-42 337.4 20.8 246 412-700 99-359 (365)
187 2j0j_A Focal adhesion kinase 1 100.0 1.4E-38 4.9E-43 365.4 18.2 251 410-705 393-649 (656)
188 3c4z_A Rhodopsin kinase; Ser/T 100.0 7.2E-38 2.5E-42 349.3 23.1 244 413-695 191-438 (543)
189 3ll6_A Cyclin G-associated kin 100.0 9.8E-39 3.4E-43 338.4 15.3 261 412-706 33-307 (337)
190 1ua2_A CAK, cell division prot 100.0 3.6E-38 1.2E-42 335.7 19.3 258 413-700 16-291 (346)
191 3g33_A Cell division protein k 100.0 4E-38 1.4E-42 329.8 19.2 257 413-700 15-296 (308)
192 3fme_A Dual specificity mitoge 100.0 1.8E-38 6.1E-43 329.2 16.3 247 413-700 13-266 (290)
193 3n9x_A Phosphotransferase; mal 100.0 9.3E-38 3.2E-42 342.5 22.4 208 413-629 32-253 (432)
194 3byv_A Rhoptry kinase; malaria 100.0 1.2E-39 4.2E-44 351.3 7.2 238 413-700 79-359 (377)
195 3mwu_A Calmodulin-domain prote 100.0 7.2E-38 2.5E-42 349.0 21.6 244 412-700 27-276 (486)
196 2vgo_A Serine/threonine-protei 100.0 7.9E-38 2.7E-42 323.4 20.4 240 412-700 19-262 (284)
197 2w5a_A Serine/threonine-protei 100.0 6.8E-39 2.3E-43 330.4 12.3 249 413-703 12-270 (279)
198 1ogq_A PGIP-2, polygalacturona 100.0 2E-38 6.9E-43 332.6 15.6 259 18-284 2-312 (313)
199 1wak_A Serine/threonine-protei 100.0 9.7E-38 3.3E-42 338.7 21.5 261 412-700 42-391 (397)
200 3sv0_A Casein kinase I-like; t 100.0 1.4E-37 4.6E-42 343.9 23.0 259 413-705 13-276 (483)
201 2y4i_B KSR2, HKSR2, kinase sup 100.0 8.5E-39 2.9E-43 336.4 12.7 254 412-706 38-301 (319)
202 3qyz_A Mitogen-activated prote 100.0 1.3E-37 4.3E-42 333.9 21.7 259 413-700 33-313 (364)
203 2j7t_A Serine/threonine-protei 100.0 4.1E-38 1.4E-42 328.5 17.4 246 413-700 25-275 (302)
204 3lij_A Calcium/calmodulin depe 100.0 8E-38 2.8E-42 349.2 20.8 244 412-700 42-291 (494)
205 3kvw_A DYRK2, dual specificity 100.0 7.7E-38 2.6E-42 342.6 20.2 191 413-631 103-302 (429)
206 3nyv_A Calmodulin-domain prote 100.0 4.5E-38 1.5E-42 350.6 18.5 244 412-700 31-281 (484)
207 2r3i_A Cell division protein k 100.0 9E-38 3.1E-42 325.5 19.5 258 413-700 9-283 (299)
208 2i6l_A Mitogen-activated prote 100.0 9.5E-38 3.2E-42 328.3 19.6 259 413-700 17-305 (320)
209 1u46_A ACK-1, activated CDC42 100.0 1.6E-38 5.5E-43 329.7 13.3 252 413-706 24-283 (291)
210 2ycf_A Serine/threonine-protei 100.0 9.9E-38 3.4E-42 328.9 19.4 246 412-700 15-274 (322)
211 2b9h_A MAP kinase FUS3, mitoge 100.0 1E-37 3.5E-42 333.2 19.3 266 413-700 17-305 (353)
212 2vwi_A Serine/threonine-protei 100.0 8.7E-39 3E-43 333.6 10.5 262 413-700 21-287 (303)
213 2fst_X Mitogen-activated prote 100.0 6.2E-38 2.1E-42 336.1 17.2 253 413-700 35-311 (367)
214 1phk_A Phosphorylase kinase; g 100.0 1.8E-37 6E-42 323.1 20.2 245 413-700 23-283 (298)
215 3pg1_A Mitogen-activated prote 100.0 8.8E-38 3E-42 334.9 18.0 256 413-700 28-316 (362)
216 2xrw_A Mitogen-activated prote 100.0 3.2E-37 1.1E-41 331.5 22.3 253 413-700 31-318 (371)
217 3q5i_A Protein kinase; CDPK, m 100.0 1.8E-37 6E-42 347.3 20.9 243 413-700 42-301 (504)
218 3an0_A Dual specificity mitoge 100.0 7.2E-38 2.5E-42 332.6 16.7 247 413-700 57-310 (340)
219 4exu_A Mitogen-activated prote 100.0 2.7E-37 9.1E-42 332.2 21.2 253 412-700 47-323 (371)
220 3com_A Serine/threonine-protei 100.0 3.9E-37 1.3E-41 323.1 21.9 243 413-700 35-278 (314)
221 3eb0_A Putative uncharacterize 100.0 1.3E-37 4.6E-42 336.1 18.0 255 413-700 13-321 (383)
222 4e7w_A Glycogen synthase kinas 100.0 1E-37 3.5E-42 338.0 17.1 256 412-700 45-321 (394)
223 1j1b_A Glycogen synthase kinas 100.0 1.4E-37 4.8E-42 339.7 18.4 257 412-700 59-336 (420)
224 1z57_A Dual specificity protei 100.0 2.7E-37 9.4E-42 327.4 20.1 252 413-700 20-328 (339)
225 3q60_A ROP5B; pseudokinase, tr 100.0 4.1E-38 1.4E-42 338.7 13.6 249 412-700 67-352 (371)
226 3e3p_A Protein kinase, putativ 100.0 2.4E-37 8.2E-42 331.2 19.4 257 413-700 29-314 (360)
227 2x7f_A TRAF2 and NCK-interacti 100.0 2.2E-37 7.4E-42 326.8 18.0 245 413-700 30-286 (326)
228 3pfq_A PKC-B, PKC-beta, protei 100.0 3.5E-37 1.2E-41 354.9 21.0 237 412-695 346-587 (674)
229 2wtk_C Serine/threonine-protei 100.0 6.5E-37 2.2E-41 319.9 20.6 246 412-700 10-263 (305)
230 2rio_A Serine/threonine-protei 100.0 2.5E-37 8.7E-42 339.1 18.3 252 413-700 21-295 (434)
231 3cek_A Dual specificity protei 100.0 3.9E-37 1.4E-41 322.9 19.0 245 413-700 34-292 (313)
232 1q8y_A SR protein kinase; tran 100.0 5.3E-37 1.8E-41 330.1 19.4 260 413-700 25-333 (373)
233 2vx3_A Dual specificity tyrosi 100.0 1.1E-36 3.7E-41 328.9 21.4 193 413-631 60-261 (382)
234 1zy4_A Serine/threonine-protei 100.0 7.7E-37 2.6E-41 318.6 19.4 259 412-700 11-283 (303)
235 2wei_A Calmodulin-domain prote 100.0 7.7E-37 2.6E-41 316.6 19.3 244 412-700 27-276 (287)
236 3coi_A Mitogen-activated prote 100.0 9.1E-37 3.1E-41 325.9 20.3 252 413-700 30-305 (353)
237 2pml_X PFPK7, Ser/Thr protein 100.0 4.1E-37 1.4E-41 327.8 17.3 259 413-700 37-322 (348)
238 3fhr_A MAP kinase-activated pr 100.0 4.7E-37 1.6E-41 325.7 16.7 245 412-700 34-287 (336)
239 1blx_A Cyclin-dependent kinase 100.0 8.2E-37 2.8E-41 322.3 17.8 257 413-700 17-296 (326)
240 3aln_A Dual specificity mitoge 100.0 2.7E-37 9.3E-42 326.3 14.1 252 412-700 27-285 (327)
241 2eu9_A Dual specificity protei 100.0 1.8E-36 6E-41 323.5 19.9 252 413-700 25-333 (355)
242 2iwi_A Serine/threonine-protei 100.0 2.8E-37 9.5E-42 323.9 12.7 235 412-700 36-283 (312)
243 3a99_A Proto-oncogene serine/t 100.0 2.2E-37 7.4E-42 326.0 10.1 234 413-700 49-293 (320)
244 3p23_A Serine/threonine-protei 100.0 2.8E-36 9.5E-41 330.0 19.2 245 413-700 30-283 (432)
245 2dyl_A Dual specificity mitoge 100.0 4.9E-36 1.7E-40 315.1 18.7 246 412-700 30-283 (318)
246 3uqc_A Probable conserved tran 100.0 2E-35 6.8E-40 305.6 19.4 224 413-706 37-264 (286)
247 3qa8_A MGC80376 protein; kinas 100.0 6E-36 2.1E-40 337.7 15.1 255 412-697 19-294 (676)
248 2pzi_A Probable serine/threoni 100.0 2.5E-35 8.4E-40 341.6 17.1 231 413-704 86-325 (681)
249 3m2w_A MAP kinase-activated pr 100.0 9.2E-35 3.1E-39 302.9 19.5 224 413-700 24-256 (299)
250 3dzo_A Rhoptry kinase domain; 100.0 5.2E-35 1.8E-39 318.6 11.0 238 413-700 84-363 (413)
251 2vuw_A Serine/threonine-protei 100.0 2.3E-34 8E-39 305.0 12.7 237 411-699 24-329 (336)
252 4fcg_A Uncharacterized protein 100.0 7E-33 2.4E-37 292.3 12.7 254 17-277 22-292 (328)
253 3rgz_A Protein brassinosteroid 100.0 6.7E-32 2.3E-36 317.4 13.9 242 18-274 8-281 (768)
254 3rgz_A Protein brassinosteroid 100.0 1.9E-31 6.4E-36 313.6 15.4 215 69-286 466-750 (768)
255 4eco_A Uncharacterized protein 100.0 1E-31 3.5E-36 308.9 8.5 243 21-274 29-389 (636)
256 4ecn_A Leucine-rich repeat pro 100.0 2.6E-31 8.8E-36 311.3 10.3 238 21-274 268-631 (876)
257 2o6q_A Variable lymphocyte rec 100.0 5.2E-28 1.8E-32 247.8 18.9 218 51-278 3-221 (270)
258 1ozn_A Reticulon 4 receptor; N 100.0 2.9E-28 1E-32 251.8 16.0 220 58-279 16-242 (285)
259 4azs_A Methyltransferase WBDD; 100.0 1.1E-29 3.8E-34 286.3 4.2 185 414-627 241-437 (569)
260 2z62_A TOLL-like receptor 4, v 99.9 9.8E-27 3.3E-31 239.1 18.6 226 51-279 3-241 (276)
261 3zyi_A Leucine-rich repeat-con 99.9 8E-27 2.7E-31 257.4 19.0 222 55-280 56-308 (452)
262 3zyj_A Leucine-rich repeat-con 99.9 7.6E-27 2.6E-31 256.6 18.7 222 55-280 45-297 (440)
263 2z66_A Variable lymphocyte rec 99.9 4E-27 1.4E-31 245.9 15.1 227 50-277 4-263 (306)
264 3m19_A Variable lymphocyte rec 99.9 2.1E-26 7.1E-31 233.2 17.0 194 51-256 3-196 (251)
265 2o6q_A Variable lymphocyte rec 99.9 1.2E-25 4.1E-30 230.3 19.8 211 43-256 5-222 (270)
266 2z80_A TOLL-like receptor 2, v 99.9 5.1E-27 1.8E-31 250.3 9.8 226 50-278 27-317 (353)
267 1p9a_G Platelet glycoprotein I 99.9 1.9E-25 6.5E-30 231.0 16.9 202 69-278 10-211 (290)
268 4fcg_A Uncharacterized protein 99.9 7.8E-26 2.7E-30 238.3 12.8 183 69-257 104-295 (328)
269 1xku_A Decorin; proteoglycan, 99.9 8.2E-25 2.8E-29 230.9 18.6 219 51-273 29-274 (330)
270 1ozn_A Reticulon 4 receptor; N 99.9 5.7E-26 1.9E-30 234.6 8.7 186 69-256 56-242 (285)
271 2xwt_C Thyrotropin receptor; s 99.9 3E-25 1E-29 222.9 13.6 215 51-272 8-236 (239)
272 3v47_A TOLL-like receptor 5B a 99.9 7.1E-25 2.4E-29 242.0 16.8 162 51-213 6-177 (455)
273 2ft3_A Biglycan; proteoglycan, 99.9 1E-24 3.5E-29 230.4 14.7 216 51-273 31-275 (332)
274 3v47_A TOLL-like receptor 5B a 99.9 9.4E-25 3.2E-29 241.0 14.7 126 152-279 286-412 (455)
275 1wwl_A Monocyte differentiatio 99.9 1.5E-25 5E-30 234.7 7.5 200 69-274 95-308 (312)
276 3en9_A Glycoprotease, O-sialog 99.9 2.1E-25 7.3E-30 249.9 8.7 190 412-629 341-539 (540)
277 3j0a_A TOLL-like receptor 5; m 99.9 3.9E-25 1.3E-29 262.5 11.3 110 69-178 266-375 (844)
278 1p9a_G Platelet glycoprotein I 99.9 2.4E-24 8.2E-29 222.7 15.5 182 67-254 29-210 (290)
279 1ogq_A PGIP-2, polygalacturona 99.9 1.5E-25 5E-30 234.7 6.3 183 69-255 101-308 (313)
280 2o6s_A Variable lymphocyte rec 99.9 1.6E-24 5.4E-29 212.7 12.9 179 50-256 4-182 (208)
281 2id5_A Lingo-1, leucine rich r 99.9 3.2E-24 1.1E-28 238.2 15.9 217 55-273 13-235 (477)
282 3rfs_A Internalin B, repeat mo 99.9 1.1E-23 3.7E-28 215.9 17.6 183 69-257 41-223 (272)
283 3oja_B Anopheles plasmodium-re 99.9 1.9E-24 6.5E-29 246.8 12.8 202 69-274 75-313 (597)
284 3o6n_A APL1; leucine-rich repe 99.9 2.2E-24 7.6E-29 233.1 12.3 201 69-273 69-306 (390)
285 3vq2_A TLR4, TOLL-like recepto 99.9 1.3E-24 4.6E-29 248.8 10.6 210 69-280 350-563 (606)
286 4glp_A Monocyte differentiatio 99.9 3.2E-24 1.1E-28 224.3 12.1 199 70-274 92-306 (310)
287 3m19_A Variable lymphocyte rec 99.9 2.3E-23 8E-28 210.7 16.9 178 51-230 10-194 (251)
288 3t6q_A CD180 antigen; protein- 99.9 1.6E-23 5.4E-28 239.9 16.9 179 55-235 14-199 (606)
289 2z81_A CD282 antigen, TOLL-lik 99.9 2.1E-24 7.1E-29 244.2 9.4 219 52-273 3-234 (549)
290 2id5_A Lingo-1, leucine rich r 99.9 4.9E-24 1.7E-28 236.8 11.8 209 69-279 104-337 (477)
291 3oja_A Leucine-rich immune mol 99.9 1.2E-24 4.1E-29 241.6 6.4 203 69-277 34-252 (487)
292 3rfs_A Internalin B, repeat mo 99.9 1.7E-23 5.7E-28 214.5 12.5 178 69-257 63-240 (272)
293 2z66_A Variable lymphocyte rec 99.9 4.2E-24 1.5E-28 222.9 8.2 184 69-255 78-264 (306)
294 3t6q_A CD180 antigen; protein- 99.9 8.2E-24 2.8E-28 242.3 11.2 209 69-279 350-564 (606)
295 3o6n_A APL1; leucine-rich repe 99.9 2.2E-23 7.4E-28 225.3 13.8 201 69-274 93-330 (390)
296 1ziw_A TOLL-like receptor 3; i 99.9 2.3E-23 8E-28 241.9 14.3 209 69-279 381-626 (680)
297 3vq2_A TLR4, TOLL-like recepto 99.9 4.7E-23 1.6E-27 235.9 16.6 200 51-252 5-217 (606)
298 2ft3_A Biglycan; proteoglycan, 99.9 8.3E-23 2.8E-27 215.7 17.1 202 69-276 78-308 (332)
299 3oja_B Anopheles plasmodium-re 99.9 2.6E-23 8.8E-28 237.4 13.7 201 69-274 99-336 (597)
300 2z62_A TOLL-like receptor 4, v 99.9 2.9E-23 9.9E-28 213.2 12.3 187 69-258 52-243 (276)
301 3a79_B TLR6, VLRB.59, TOLL-lik 99.9 3.4E-23 1.1E-27 234.9 12.4 162 114-279 350-514 (562)
302 1ziw_A TOLL-like receptor 3; i 99.9 9.2E-23 3.2E-27 236.8 16.3 186 51-238 2-194 (680)
303 1xku_A Decorin; proteoglycan, 99.9 2E-22 6.8E-27 212.6 16.9 202 69-276 76-307 (330)
304 3o53_A Protein LRIM1, AGAP0063 99.9 1E-23 3.5E-28 221.2 5.6 199 70-277 35-252 (317)
305 4g8a_A TOLL-like receptor 4; l 99.9 1.5E-22 5.3E-27 232.6 15.6 216 38-254 9-239 (635)
306 2z7x_B TOLL-like receptor 1, v 99.9 5.2E-23 1.8E-27 231.1 11.2 162 114-279 321-485 (520)
307 1wwl_A Monocyte differentiatio 99.9 1.5E-23 5E-28 219.4 5.9 178 69-253 121-310 (312)
308 4ecn_A Leucine-rich repeat pro 99.9 3.1E-23 1.1E-27 242.9 8.7 198 69-273 448-684 (876)
309 4eco_A Uncharacterized protein 99.9 3.7E-22 1.3E-26 229.3 15.8 199 69-274 353-578 (636)
310 4ay9_X Follicle-stimulating ho 99.9 4.1E-22 1.4E-26 212.0 14.4 221 51-276 7-237 (350)
311 3j0a_A TOLL-like receptor 5; m 99.9 4.6E-22 1.6E-26 236.1 16.4 190 67-257 22-222 (844)
312 3zyi_A Leucine-rich repeat-con 99.9 5.6E-22 1.9E-26 218.6 15.0 182 69-254 99-305 (452)
313 3cvr_A Invasion plasmid antige 99.9 1.6E-22 5.6E-27 226.5 10.8 199 41-275 32-243 (571)
314 3zyj_A Leucine-rich repeat-con 99.9 4E-22 1.4E-26 218.9 13.5 182 69-254 88-294 (440)
315 2o6s_A Variable lymphocyte rec 99.9 5.9E-22 2E-26 194.3 13.1 177 53-240 14-190 (208)
316 3e6j_A Variable lymphocyte rec 99.9 1.1E-21 3.6E-26 195.5 14.8 156 51-228 17-172 (229)
317 2z80_A TOLL-like receptor 2, v 99.9 8.8E-23 3E-27 217.4 5.8 187 69-257 76-319 (353)
318 3a79_B TLR6, VLRB.59, TOLL-lik 99.9 1.3E-21 4.4E-26 221.9 15.0 143 64-213 47-194 (562)
319 2z63_A TOLL-like receptor 4, v 99.9 3.4E-22 1.2E-26 227.0 10.0 206 69-279 325-535 (570)
320 1zar_A RIO2 kinase; serine kin 99.9 9.5E-22 3.3E-26 202.0 11.6 129 412-560 95-241 (282)
321 1h6u_A Internalin H; cell adhe 99.9 1.2E-21 4.1E-26 204.4 12.2 189 69-274 41-229 (308)
322 2xot_A Amphoterin-induced prot 99.9 1E-21 3.4E-26 209.8 11.9 177 51-228 16-202 (361)
323 2z7x_B TOLL-like receptor 1, v 99.9 8.1E-22 2.8E-26 221.4 11.6 138 68-212 20-162 (520)
324 2z63_A TOLL-like receptor 4, v 99.9 2.6E-21 9E-26 219.7 15.8 183 64-249 23-210 (570)
325 2v9t_B SLIT homolog 2 protein 99.9 3E-21 1E-25 191.0 13.6 148 77-253 19-166 (220)
326 2v9t_B SLIT homolog 2 protein 99.9 2.8E-21 9.5E-26 191.2 13.0 153 50-203 8-165 (220)
327 2z81_A CD282 antigen, TOLL-lik 99.8 4.1E-22 1.4E-26 225.3 7.0 198 69-279 310-514 (549)
328 2xwt_C Thyrotropin receptor; s 99.8 2.3E-21 8E-26 194.4 11.1 174 69-250 55-237 (239)
329 2v70_A SLIT-2, SLIT homolog 2 99.8 4.9E-21 1.7E-25 189.4 12.5 155 73-256 15-170 (220)
330 4b8c_D Glucose-repressible alc 99.8 2.9E-22 1E-26 232.6 4.3 219 20-249 130-369 (727)
331 1h6u_A Internalin H; cell adhe 99.8 5.3E-21 1.8E-25 199.4 13.0 171 69-255 63-233 (308)
332 3oja_A Leucine-rich immune mol 99.8 2.8E-22 9.7E-27 222.5 3.4 180 69-256 58-255 (487)
333 3e6j_A Variable lymphocyte rec 99.8 1.7E-20 5.8E-25 186.8 15.3 156 95-256 21-176 (229)
334 2v70_A SLIT-2, SLIT homolog 2 99.8 9.1E-21 3.1E-25 187.5 11.6 156 50-206 8-169 (220)
335 2xot_A Amphoterin-induced prot 99.8 3.9E-21 1.3E-25 205.2 9.6 176 73-253 22-203 (361)
336 1h6t_A Internalin B; cell adhe 99.8 1.7E-20 5.9E-25 193.9 12.3 170 69-254 46-215 (291)
337 3o53_A Protein LRIM1, AGAP0063 99.8 5.9E-21 2E-25 200.0 8.5 202 69-278 58-278 (317)
338 4glp_A Monocyte differentiatio 99.8 5.8E-21 2E-25 199.5 7.9 202 69-274 64-284 (310)
339 4fmz_A Internalin; leucine ric 99.8 1.6E-20 5.4E-25 199.4 11.3 192 69-272 132-343 (347)
340 1o6v_A Internalin A; bacterial 99.8 3.6E-20 1.2E-24 204.9 13.2 191 69-274 177-387 (466)
341 4g8a_A TOLL-like receptor 4; l 99.8 2.7E-20 9.2E-25 213.9 11.7 209 69-279 371-584 (635)
342 3bz5_A Internalin-J, INLJ; leu 99.8 2.9E-19 1E-23 196.5 17.2 181 69-273 64-244 (457)
343 3bz5_A Internalin-J, INLJ; leu 99.8 2.8E-19 9.6E-24 196.7 17.1 177 69-269 85-261 (457)
344 3cvr_A Invasion plasmid antige 99.8 1.3E-19 4.5E-24 203.0 13.3 163 68-256 79-247 (571)
345 1m9s_A Internalin B; cell inva 99.8 1.3E-19 4.4E-24 205.3 12.4 172 69-256 43-214 (605)
346 3g06_A SSPH2 (leucine-rich rep 99.8 1.8E-19 6.1E-24 204.4 13.2 180 68-273 60-272 (622)
347 1o6v_A Internalin A; bacterial 99.8 2.2E-19 7.4E-24 198.7 13.3 188 69-274 156-343 (466)
348 1xeu_A Internalin C; cellular 99.8 1.1E-19 3.7E-24 184.9 9.3 169 70-255 20-188 (263)
349 4ezg_A Putative uncharacterize 99.8 1.4E-19 4.6E-24 175.8 9.5 154 90-253 41-195 (197)
350 4fmz_A Internalin; leucine ric 99.8 5.5E-19 1.9E-23 187.4 14.6 189 69-273 66-254 (347)
351 4ezg_A Putative uncharacterize 99.8 2.1E-19 7.1E-24 174.5 9.6 151 69-229 44-195 (197)
352 1h6t_A Internalin B; cell adhe 99.8 2.2E-19 7.6E-24 185.5 10.2 187 72-275 27-213 (291)
353 1m9s_A Internalin B; cell inva 99.8 1.7E-19 5.9E-24 204.3 8.7 188 70-274 22-209 (605)
354 1zth_A RIO1 serine protein kin 99.8 5.2E-19 1.8E-23 179.3 11.4 133 412-561 52-219 (258)
355 1w8a_A SLIT protein; signaling 99.8 2.1E-19 7.1E-24 173.7 7.5 131 73-207 12-143 (192)
356 1jl5_A Outer protein YOPM; leu 99.8 2.2E-19 7.5E-24 197.4 6.7 183 69-273 11-206 (454)
357 2ast_B S-phase kinase-associat 99.8 2.2E-20 7.5E-25 197.3 -2.7 201 69-272 70-282 (336)
358 2o6r_A Variable lymphocyte rec 99.8 3.4E-18 1.2E-22 162.8 12.2 138 50-207 4-141 (177)
359 2ca6_A RAN GTPase-activating p 99.8 9.5E-21 3.2E-25 204.3 -6.3 204 69-273 32-285 (386)
360 1jl5_A Outer protein YOPM; leu 99.8 1E-17 3.6E-22 184.0 17.4 178 69-273 91-268 (454)
361 1w8a_A SLIT protein; signaling 99.7 6.5E-19 2.2E-23 170.2 6.6 129 96-229 11-140 (192)
362 2ast_B S-phase kinase-associat 99.7 6.8E-21 2.3E-25 201.2 -8.6 211 51-273 35-258 (336)
363 2ca6_A RAN GTPase-activating p 99.7 1E-20 3.5E-25 204.0 -8.9 204 69-273 60-314 (386)
364 1dce_A Protein (RAB geranylger 99.7 2.6E-21 8.9E-26 217.9 -14.6 180 70-258 350-552 (567)
365 2wfh_A SLIT homolog 2 protein 99.7 1.1E-17 3.9E-22 161.5 12.4 126 74-204 15-140 (193)
366 3g06_A SSPH2 (leucine-rich rep 99.7 1.1E-17 3.8E-22 189.7 13.9 183 69-274 81-296 (622)
367 2ell_A Acidic leucine-rich nuc 99.7 2.6E-18 8.8E-23 162.2 7.3 132 69-203 24-160 (168)
368 4ay9_X Follicle-stimulating ho 99.7 7.8E-18 2.7E-22 178.8 11.4 196 73-273 13-213 (350)
369 3goz_A Leucine-rich repeat-con 99.7 6.8E-20 2.3E-24 195.7 -4.8 203 69-272 22-263 (362)
370 2ell_A Acidic leucine-rich nuc 99.7 3.8E-18 1.3E-22 161.0 7.8 133 92-228 23-160 (168)
371 1xeu_A Internalin C; cellular 99.7 1.1E-18 3.7E-23 177.5 3.4 170 91-276 17-186 (263)
372 3goz_A Leucine-rich repeat-con 99.7 1.6E-19 5.4E-24 192.9 -3.8 199 73-273 2-236 (362)
373 4b8c_D Glucose-repressible alc 99.7 1.6E-18 5.5E-23 201.2 2.3 175 69-254 224-406 (727)
374 2wfh_A SLIT homolog 2 protein 99.7 4.6E-17 1.6E-21 157.2 11.2 128 96-253 13-140 (193)
375 2je0_A Acidic leucine-rich nuc 99.7 7.4E-18 2.5E-22 155.6 5.2 127 69-198 17-148 (149)
376 2o6r_A Variable lymphocyte rec 99.7 7.9E-17 2.7E-21 153.3 11.4 132 96-256 10-141 (177)
377 2je0_A Acidic leucine-rich nuc 99.7 1.8E-17 6.2E-22 153.0 4.5 127 93-247 17-148 (149)
378 1dce_A Protein (RAB geranylger 99.7 4.1E-19 1.4E-23 200.0 -10.9 177 89-274 345-545 (567)
379 1a9n_A U2A', U2A'; complex (nu 99.6 9.2E-17 3.1E-21 152.8 5.7 132 113-252 15-153 (176)
380 1a9n_A U2A', U2A'; complex (nu 99.6 1.7E-16 5.7E-21 151.0 5.1 134 88-228 14-153 (176)
381 1ds9_A Outer arm dynein; leuci 99.6 9.8E-19 3.4E-23 169.9 -10.7 151 93-252 18-185 (198)
382 1z7x_W Ribonuclease inhibitor; 99.6 2.2E-18 7.7E-23 190.1 -10.0 205 69-274 170-410 (461)
383 4gyi_A RIO2 kinase; protein ki 99.6 1.3E-15 4.5E-20 160.4 11.3 135 411-561 99-265 (397)
384 1ds9_A Outer arm dynein; leuci 99.6 1.1E-18 3.9E-23 169.4 -11.8 151 69-228 18-185 (198)
385 1z7x_W Ribonuclease inhibitor; 99.6 3.4E-18 1.2E-22 188.6 -11.8 203 69-273 142-381 (461)
386 2r9u_A Variable lymphocyte rec 99.6 6.6E-15 2.3E-19 139.5 10.9 113 73-214 16-128 (174)
387 3g39_A Variable lymphocyte rec 99.6 8E-15 2.7E-19 138.4 11.0 103 74-204 14-116 (170)
388 3sb4_A Hypothetical leucine ri 99.5 5.6E-15 1.9E-19 155.3 8.5 183 69-256 49-314 (329)
389 3g39_A Variable lymphocyte rec 99.5 1.3E-14 4.5E-19 136.9 9.5 104 120-228 12-115 (170)
390 2r9u_A Variable lymphocyte rec 99.5 2.2E-14 7.4E-19 135.9 9.4 86 141-228 33-118 (174)
391 3sb4_A Hypothetical leucine ri 99.5 7.5E-14 2.6E-18 146.7 9.5 200 69-273 25-308 (329)
392 2ifg_A High affinity nerve gro 99.4 1.5E-13 5E-18 145.6 8.0 109 52-204 7-117 (347)
393 2ifg_A High affinity nerve gro 99.4 2.3E-13 7.8E-18 144.1 9.1 103 122-229 13-117 (347)
394 3un9_A NLR family member X1; l 99.3 5.9E-15 2E-19 157.3 -13.6 134 69-203 72-224 (372)
395 3un9_A NLR family member X1; l 99.3 2.3E-14 7.7E-19 152.8 -10.7 161 92-254 71-254 (372)
396 4fdw_A Leucine rich hypothetic 99.2 3.1E-11 1.1E-15 129.8 12.5 170 70-247 136-331 (401)
397 3tm0_A Aminoglycoside 3'-phosp 99.2 4.3E-11 1.5E-15 121.1 11.5 135 414-559 21-212 (263)
398 4fdw_A Leucine rich hypothetic 99.2 9.5E-11 3.2E-15 126.0 12.5 178 69-253 157-359 (401)
399 3ogk_B Coronatine-insensitive 99.2 7.3E-13 2.5E-17 150.7 -4.5 175 69-247 164-350 (592)
400 3ogk_B Coronatine-insensitive 99.2 6E-13 2.1E-17 151.4 -5.7 196 70-270 139-350 (592)
401 1nd4_A Aminoglycoside 3'-phosp 99.2 1E-10 3.4E-15 118.0 11.2 127 417-559 30-213 (264)
402 2p1m_B Transport inhibitor res 99.1 5.3E-13 1.8E-17 151.9 -11.0 201 69-273 289-517 (594)
403 2p1m_B Transport inhibitor res 99.0 9.8E-13 3.4E-17 149.7 -13.0 182 69-253 314-520 (594)
404 3dxp_A Putative acyl-COA dehyd 99.0 1.1E-09 3.7E-14 116.3 11.0 139 414-560 45-248 (359)
405 2ra8_A Uncharacterized protein 98.9 7.9E-11 2.7E-15 124.4 -0.5 180 69-253 107-321 (362)
406 3rw6_A Nuclear RNA export fact 98.9 3.5E-12 1.2E-16 128.0 -12.9 120 52-178 77-209 (267)
407 3sg8_A APH(2'')-ID; antibiotic 98.8 1.4E-09 4.8E-14 112.5 3.2 194 414-628 27-287 (304)
408 2ra8_A Uncharacterized protein 98.8 2.4E-10 8.1E-15 120.7 -2.8 176 69-250 139-341 (362)
409 3rw6_A Nuclear RNA export fact 98.6 9.5E-10 3.3E-14 110.2 -5.4 91 89-182 137-237 (267)
410 3r70_A Aminoglycoside phosphot 98.6 3.6E-07 1.2E-11 95.1 13.6 131 413-560 43-237 (320)
411 3d1u_A Putative fructosamine-3 98.5 1.1E-06 3.7E-11 89.8 14.2 141 413-559 21-215 (288)
412 3tdw_A Gentamicin resistance p 98.4 1.9E-06 6.4E-11 88.9 14.5 134 414-560 26-224 (306)
413 1io0_A Tropomodulin; LRR prote 98.4 9.2E-09 3.1E-13 98.0 -4.0 94 85-178 28-136 (185)
414 4gkh_A Aminoglycoside 3'-phosp 98.4 1.3E-06 4.3E-11 88.4 11.4 133 415-559 32-222 (272)
415 1io0_A Tropomodulin; LRR prote 98.3 2.3E-08 7.9E-13 95.2 -3.1 94 109-203 28-136 (185)
416 3ats_A Putative uncharacterize 98.2 2.3E-06 7.8E-11 90.4 9.2 78 414-491 27-121 (357)
417 3ovc_A Hygromycin-B 4-O-kinase 98.2 6.1E-06 2.1E-10 87.2 12.0 141 414-560 48-243 (362)
418 4fs7_A Uncharacterized protein 98.2 5.6E-06 1.9E-10 88.7 10.4 153 87-249 224-376 (394)
419 4fs7_A Uncharacterized protein 98.1 2.8E-06 9.7E-11 91.0 7.5 173 69-252 162-355 (394)
420 4gt6_A Cell surface protein; l 98.1 7.8E-06 2.7E-10 87.5 9.6 113 134-252 258-370 (394)
421 4gt6_A Cell surface protein; l 98.0 1.6E-05 5.5E-10 85.1 11.4 108 158-273 258-368 (394)
422 2q83_A YTAA protein; 2635576, 97.9 2.9E-05 9.9E-10 81.1 10.8 141 414-559 39-251 (346)
423 4h09_A Hypothetical leucine ri 97.9 1.9E-05 6.6E-10 83.9 8.9 154 89-249 190-343 (379)
424 2olc_A MTR kinase, methylthior 97.9 5E-05 1.7E-09 81.3 11.9 74 413-488 36-120 (397)
425 4h09_A Hypothetical leucine ri 97.8 5E-05 1.7E-09 80.7 9.4 165 81-252 146-322 (379)
426 3jr1_A Putative fructosamine-3 97.7 0.00016 5.4E-09 74.3 10.9 138 414-556 43-232 (312)
427 2pyw_A Uncharacterized protein 97.6 0.00035 1.2E-08 75.2 12.1 80 530-625 232-313 (420)
428 3f7w_A Putative fructosamine-3 97.5 0.00045 1.5E-08 70.2 12.0 72 414-489 22-96 (288)
429 3e4g_A ATP synthase subunit S, 97.4 2.8E-05 9.4E-10 72.2 0.4 84 69-152 61-150 (176)
430 3e4g_A ATP synthase subunit S, 97.3 2E-05 6.7E-10 73.2 -1.9 35 93-127 61-95 (176)
431 1zyl_A Hypothetical protein YI 97.3 0.0017 6E-08 67.0 12.8 142 414-559 33-222 (328)
432 2ppq_A HSK, HK, homoserine kin 97.2 0.0019 6.5E-08 66.5 12.2 143 414-559 29-216 (322)
433 3feg_A Choline/ethanolamine ki 97.2 0.0014 4.7E-08 69.2 10.8 142 414-560 57-254 (379)
434 3dxq_A Choline/ethanolamine ki 97.2 0.0015 5E-08 66.8 10.4 138 414-560 25-202 (301)
435 3csv_A Aminoglycoside phosphot 97.1 0.0026 9E-08 65.9 11.9 142 414-560 25-217 (333)
436 3rfe_A Platelet glycoprotein I 97.1 0.00043 1.5E-08 61.1 4.8 36 167-203 33-68 (130)
437 3rfe_A Platelet glycoprotein I 96.9 0.0012 4E-08 58.3 6.2 36 119-154 33-68 (130)
438 1nw1_A Choline kinase (49.2 KD 96.9 0.0054 1.8E-07 66.0 12.4 71 414-490 80-159 (429)
439 2qg7_A Ethanolamine kinase PV0 96.8 0.0048 1.6E-07 66.8 11.3 72 414-490 115-188 (458)
440 1pgv_A TMD-1, tropomodulin TMD 96.8 6E-05 2.1E-09 71.3 -3.5 112 91-203 39-170 (197)
441 3c5i_A Choline kinase; choline 96.8 0.0031 1.1E-07 66.4 9.3 72 414-490 40-121 (369)
442 1pgv_A TMD-1, tropomodulin TMD 96.8 0.00014 4.8E-09 68.8 -1.2 65 114-178 38-111 (197)
443 3i1a_A Spectinomycin phosphotr 96.4 0.0053 1.8E-07 63.8 7.5 31 530-560 206-236 (339)
444 2yle_A Protein spire homolog 1 96.3 0.022 7.6E-07 54.1 10.6 104 488-628 33-136 (229)
445 3f2s_A CK, chetk-alpha, cholin 96.3 0.011 3.6E-07 62.7 9.4 142 414-559 59-279 (401)
446 3mes_A Choline kinase; malaria 95.6 0.019 6.6E-07 61.2 7.8 141 414-560 77-291 (424)
447 3g15_A CK, chetk-alpha, cholin 90.5 0.75 2.6E-05 48.6 9.3 30 531-560 245-280 (401)
448 4ano_A ESSB; membrane protein, 82.9 2.7 9.2E-05 39.9 7.2 83 461-558 48-131 (219)
449 4ann_A ESSB; membrane protein, 80.3 2 6.8E-05 40.6 5.3 116 461-629 43-158 (215)
450 2k1k_A Ephrin type-A receptor 79.9 0.052 1.8E-06 35.8 -4.0 29 307-335 6-34 (38)
451 3cxl_A N-chimerin; SH2, RHO-GA 79.3 0.24 8.3E-06 53.4 -1.6 55 420-474 152-215 (463)
452 2ks1_B Epidermal growth factor 67.3 0.26 8.9E-06 33.5 -3.1 8 334-341 32-39 (44)
453 2l2t_A Receptor tyrosine-prote 62.2 0.27 9.1E-06 33.4 -3.8 8 334-341 31-38 (44)
454 3ls8_A Phosphatidylinositol 3- 57.5 55 0.0019 36.0 11.1 46 506-558 453-500 (614)
455 2lz0_A Uncharacterized protein 48.0 44 0.0015 27.0 6.5 49 78-127 5-53 (100)
456 2lz0_A Uncharacterized protein 36.8 47 0.0016 26.8 5.0 47 104-151 7-53 (100)
457 2x6h_A GH13170P, VPS34, phosph 35.1 2.1E+02 0.0073 31.9 11.4 45 508-559 529-575 (696)
458 1cja_A Protein (actin-fragmin 21.1 1.9E+02 0.0063 29.1 7.0 131 417-560 79-237 (342)
No 1
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=4.8e-54 Score=450.99 Aligned_cols=256 Identities=27% Similarity=0.425 Sum_probs=204.4
Q ss_pred cceecccCeeEEEEEEeC------CCceEEEEEcCCCchhhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCcceEEEEee
Q 005226 412 AYVLGKSGLGIVYKVVLG------NGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFI 485 (707)
Q Consensus 412 ~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~ 485 (707)
.+.||+|+||+||+|++. +++.||||+++.......++|.+|+++|++++|||||+++|+|.+++..++|||||
T Consensus 46 ~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~Ey~ 125 (329)
T 4aoj_A 46 KWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYM 125 (329)
T ss_dssp EEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred EEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcC
Confidence 357999999999999864 47889999998877766789999999999999999999999999999999999999
Q ss_pred cCCChHHHHhCCCCC----------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEecc
Q 005226 486 SNGNLANALRGRNGQ----------PSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDF 555 (707)
Q Consensus 486 ~~gsL~~~l~~~~~~----------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~Df 555 (707)
++|+|.++|+..... ....++|.++++|+.|||.||+|||+ ++||||||||+|||+++++.+||+||
T Consensus 126 ~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~---~~iiHRDLKp~NILl~~~~~~Ki~DF 202 (329)
T 4aoj_A 126 RHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAG---LHFVHRDLATRNCLVGQGLVVKIGDF 202 (329)
T ss_dssp TTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEETTTEEEECCC
T ss_pred CCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhc---CCeecccccHhhEEECCCCcEEEccc
Confidence 999999999865421 12469999999999999999999999 89999999999999999999999999
Q ss_pred cccccccccCCCCCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCC
Q 005226 556 GLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTS 634 (707)
Q Consensus 556 Gla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~ellt-g~~P~~~~~~~ 634 (707)
|+|+.......... .....||+.|||||++.. ..++.++|||||||++|||+| |+.||....
T Consensus 203 Gla~~~~~~~~~~~--------------~~~~~gt~~ymAPE~~~~-~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~-- 265 (329)
T 4aoj_A 203 GMSRDIYSTDYYRV--------------GGRTMLPIRWMPPESILY-RKFTTESDVWSFGVVLWEIFTYGKQPWYQLS-- 265 (329)
T ss_dssp C------------------------------CCCCGGGCCHHHHTT-CCCCHHHHHHHHHHHHHHHHTTSCCTTCSSC--
T ss_pred ccceeccCCCccee--------------cCcccccccccChhhhcC-CCCCccccccchHHHHHHHHcCCCCCCCCCC--
Confidence 99987653321111 123457999999999765 788999999999999999999 899996532
Q ss_pred CCccchhHHHHHHhhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHHhhc
Q 005226 635 TSIEVPDLVRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERIG 706 (707)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~~L~~i~ 706 (707)
..++...+....+...+ .....++.+|+.+||+.||++||||+||++.|+.+.
T Consensus 266 ----~~~~~~~i~~g~~~~~p---------------~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~ 318 (329)
T 4aoj_A 266 ----NTEAIDCITQGRELERP---------------RACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALA 318 (329)
T ss_dssp ----HHHHHHHHHHTCCCCCC---------------TTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHH
T ss_pred ----HHHHHHHHHcCCCCCCc---------------ccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHh
Confidence 23444444443322211 122345789999999999999999999999999874
No 2
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=1.4e-54 Score=448.77 Aligned_cols=256 Identities=27% Similarity=0.462 Sum_probs=209.0
Q ss_pred cceecccCeeEEEEEEeC------CCceEEEEEcCCCchhhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCcceEEEEee
Q 005226 412 AYVLGKSGLGIVYKVVLG------NGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFI 485 (707)
Q Consensus 412 ~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~ 485 (707)
.+.||+|+||+||+|++. ++..||||+++.......++|.+|+++|++++|||||+++|+|.+++..++|||||
T Consensus 18 ~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~Ey~ 97 (299)
T 4asz_A 18 KRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYM 97 (299)
T ss_dssp EEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred eeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEEEEEcC
Confidence 347999999999999864 47889999998877666789999999999999999999999999999999999999
Q ss_pred cCCChHHHHhCCC--------CCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEecccc
Q 005226 486 SNGNLANALRGRN--------GQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGL 557 (707)
Q Consensus 486 ~~gsL~~~l~~~~--------~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGl 557 (707)
++|+|.++|+..+ +.....++|.++++|+.|||.||+|||+ ++||||||||+|||++.++.+||+|||+
T Consensus 98 ~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~---~~iiHRDlKp~NILl~~~~~~Ki~DFGl 174 (299)
T 4asz_A 98 KHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLAS---QHFVHRDLATRNCLVGENLLVKIGDFGM 174 (299)
T ss_dssp TTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCCSC
T ss_pred CCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCccCHhhEEECCCCcEEECCccc
Confidence 9999999997643 2234579999999999999999999999 8999999999999999999999999999
Q ss_pred cccccccCCCCCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCCC
Q 005226 558 SRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTS 636 (707)
Q Consensus 558 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~ellt-g~~P~~~~~~~~~ 636 (707)
|+.......... .....||+.|||||++.. ..++.++|||||||++|||+| |+.||....
T Consensus 175 a~~~~~~~~~~~--------------~~~~~gt~~ymAPE~~~~-~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~---- 235 (299)
T 4asz_A 175 SRDVYSTDYYRV--------------GGHTMLPIRWMPPESIMY-RKFTTESDVWSLGVVLWEIFTYGKQPWYQLS---- 235 (299)
T ss_dssp HHHHTGGGCEEE--------------TTTEEECGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTTCCTTTTSC----
T ss_pred ceecCCCCceee--------------cCceecChhhcCHHHHcC-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCC----
Confidence 987653321110 022457999999999765 678999999999999999999 899997532
Q ss_pred ccchhHHHHHHhhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHHhhc
Q 005226 637 IEVPDLVRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERIG 706 (707)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~~L~~i~ 706 (707)
..++...+........+ .....++.+|+.+||+.||++||||++|++.|+++.
T Consensus 236 --~~~~~~~i~~~~~~~~p---------------~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~ 288 (299)
T 4asz_A 236 --NNEVIECITQGRVLQRP---------------RTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLA 288 (299)
T ss_dssp --HHHHHHHHHHTCCCCCC---------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred --HHHHHHHHHcCCCCCCC---------------ccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence 23444444443322211 122346789999999999999999999999999873
No 3
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=6.4e-54 Score=445.78 Aligned_cols=256 Identities=27% Similarity=0.357 Sum_probs=207.9
Q ss_pred cceecccCeeEEEEEEeC------CCceEEEEEcCCCch-hhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCcceEEEEe
Q 005226 412 AYVLGKSGLGIVYKVVLG------NGIPVAVRRLGEGGE-QRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDF 484 (707)
Q Consensus 412 ~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~ 484 (707)
.+.||+|+||+||+|.+. +++.||||+++.... ...++|.+|+.++++++|||||+++|+|.+++..++||||
T Consensus 31 ~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~Ey 110 (308)
T 4gt4_A 31 MEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSY 110 (308)
T ss_dssp EEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred eeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEEEEEc
Confidence 347999999999999863 568899999976533 3457899999999999999999999999999999999999
Q ss_pred ecCCChHHHHhCCCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEe
Q 005226 485 ISNGNLANALRGRNGQ-----------PSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYIS 553 (707)
Q Consensus 485 ~~~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~ 553 (707)
|++|+|.++|+..... ....++|.++++|+.|||+||+|||+ ++||||||||+|||+++++.+||+
T Consensus 111 ~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~---~~iiHRDLK~~NILl~~~~~~Ki~ 187 (308)
T 4gt4_A 111 CSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSS---HHVVHKDLATRNVLVYDKLNVKIS 187 (308)
T ss_dssp CSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEEC
T ss_pred CCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHh---CCCCCCCccccceEECCCCCEEEC
Confidence 9999999999764311 12469999999999999999999999 899999999999999999999999
Q ss_pred cccccccccccCCCCCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCC
Q 005226 554 DFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPT 632 (707)
Q Consensus 554 DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~ellt-g~~P~~~~~ 632 (707)
|||+|+.......... .....||+.|||||++.. ..++.++|||||||++|||+| |+.||....
T Consensus 188 DFGlar~~~~~~~~~~--------------~~~~~gt~~ymAPE~l~~-~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~ 252 (308)
T 4gt4_A 188 DLGLFREVYAADYYKL--------------LGNSLLPIRWMAPEAIMY-GKFSIDSDIWSYGVVLWEVFSYGLQPYCGYS 252 (308)
T ss_dssp CSCCBCGGGGGGCBCS--------------SSSSCBCGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTTCCTTTTCC
T ss_pred CcccceeccCCCceeE--------------ecccccCCcccCHHHHhC-CCCCccchhhhHHHHHHHHHhCCCCCCCCCC
Confidence 9999987653322111 123457999999999765 678999999999999999999 899996532
Q ss_pred CCCCccchhHHHHHHhhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHHhhc
Q 005226 633 TSTSIEVPDLVRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERIG 706 (707)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~~L~~i~ 706 (707)
..++...+........+ ......+.+|+.+||+.||++||||+||++.|+.+.
T Consensus 253 ------~~~~~~~i~~~~~~~~p---------------~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~~ 305 (308)
T 4gt4_A 253 ------NQDVVEMIRNRQVLPCP---------------DDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAWG 305 (308)
T ss_dssp ------HHHHHHHHHTTCCCCCC---------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred ------HHHHHHHHHcCCCCCCc---------------ccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhcc
Confidence 23455555443322211 123345789999999999999999999999998764
No 4
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=4.4e-53 Score=437.59 Aligned_cols=255 Identities=27% Similarity=0.398 Sum_probs=198.9
Q ss_pred cceecccCeeEEEEEEeCCCceEEEEEcCCC--chhhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCcceEEEEeecCCC
Q 005226 412 AYVLGKSGLGIVYKVVLGNGIPVAVRRLGEG--GEQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGN 489 (707)
Q Consensus 412 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gs 489 (707)
.+.||+|+||+||+|++.+ .||||+++.. .....++|.+|++++++++|||||+++|+|. ++..++|||||++|+
T Consensus 41 ~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~-~~~~~iVmEy~~gGs 117 (307)
T 3omv_A 41 STRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVTQWCEGSS 117 (307)
T ss_dssp EEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEECCSSCB
T ss_pred eeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEE-CCeEEEEEEcCCCCC
Confidence 4579999999999999754 5899998754 3344578999999999999999999999885 467899999999999
Q ss_pred hHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEecccccccccccCCCCC
Q 005226 490 LANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPS 569 (707)
Q Consensus 490 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~ 569 (707)
|.++|+... ..++|.++++|+.|||.||+|||+ ++||||||||+|||+++++.+||+|||+|+..........
T Consensus 118 L~~~l~~~~----~~l~~~~~~~i~~qia~gL~yLH~---~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~ 190 (307)
T 3omv_A 118 LYKHLHVQE----TKFQMFQLIDIARQTAQGMDYLHA---KNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQ 190 (307)
T ss_dssp HHHHHHTSC----CCCCHHHHHHHHHHHHHHHHHHHH---TTCBCSCCCSSSEEEETTEEEEECCCSSCBC---------
T ss_pred HHHHHhhcC----CCCCHHHHHHHHHHHHHHHHHHHH---CCccCCccCHHHEEECCCCcEEEeeccCceecccCCccee
Confidence 999998653 359999999999999999999999 8999999999999999999999999999987643221111
Q ss_pred CCCCCcCCCCCCCCccccccCccccCCCCCCC--CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchhHHHHHH
Q 005226 570 SSGGFMGGALPYMKPVQTEKTNNYRAPEARVP--GNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVRWVK 647 (707)
Q Consensus 570 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~ 647 (707)
.....||+.|||||++.. ...++.++|||||||++|||+||+.||...... ..+...+.
T Consensus 191 --------------~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~-----~~~~~~~~ 251 (307)
T 3omv_A 191 --------------VEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNR-----DQIIFMVG 251 (307)
T ss_dssp -----------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCH-----HHHHHHHH
T ss_pred --------------ecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChH-----HHHHHHHh
Confidence 123468999999998753 346899999999999999999999999753221 12222232
Q ss_pred hhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHHhhc
Q 005226 648 KGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERIG 706 (707)
Q Consensus 648 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~~L~~i~ 706 (707)
........ ... .......+.+|+.+||+.||++||||+||++.|+.++
T Consensus 252 ~~~~~p~~-~~~----------~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~ 299 (307)
T 3omv_A 252 RGYASPDL-SKL----------YKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQ 299 (307)
T ss_dssp TTCCCCCS-TTS----------CTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHH
T ss_pred cCCCCCCc-ccc----------cccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHh
Confidence 22221110 000 1123356789999999999999999999999998874
No 5
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=2.4e-51 Score=427.28 Aligned_cols=269 Identities=21% Similarity=0.260 Sum_probs=196.5
Q ss_pred ceecccCeeEEEEEEeCCCceEEEEEcCCCchhhHHHHHHHHHHHHhcCCCceeeeEEEEEcCC----cceEEEEeecCC
Q 005226 413 YVLGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPD----EKLLISDFISNG 488 (707)
Q Consensus 413 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~----~~~lV~e~~~~g 488 (707)
+.||+|+||+||+|++ +|+.||||+++...... ..+..|+..+.+++|||||+++|+|.+++ ..++|||||++|
T Consensus 9 ~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~~~~-~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~Ey~~~g 86 (303)
T 3hmm_A 9 ESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERS-WFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHG 86 (303)
T ss_dssp EEEEECSSSEEEEEEE-TTEEEEEEEECGGGHHH-HHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTTC
T ss_pred EEEeeCCCeEEEEEEE-CCEEEEEEEECccchhh-HHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEecCCCCC
Confidence 4799999999999998 68899999997643322 23345666677899999999999998764 468999999999
Q ss_pred ChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcC-----CCCceecCCCCCCeEEcCCCCeEEecccccccccc
Q 005226 489 NLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECS-----PRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINI 563 (707)
Q Consensus 489 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~-----~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~ 563 (707)
+|.++|+.. .++|..+.+|+.|+|.||+|||+.+ .++||||||||+|||+|.++++||+|||+|+....
T Consensus 87 sL~~~l~~~------~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~ 160 (303)
T 3hmm_A 87 SLFDYLNRY------TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDS 160 (303)
T ss_dssp BHHHHHHHC------CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEEET
T ss_pred cHHHHHHhC------CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCccccC
Confidence 999999864 4899999999999999999999731 24899999999999999999999999999987654
Q ss_pred cCCCCCCCCCCcCCCCCCCCccccccCccccCCCCCCCC-----CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCC--
Q 005226 564 TGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPG-----NRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTS-- 636 (707)
Q Consensus 564 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~-- 636 (707)
...... .......||+.|||||++.+. ..++.++|||||||++|||+||++|+........
T Consensus 161 ~~~~~~------------~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~ 228 (303)
T 3hmm_A 161 ATDTID------------IAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPY 228 (303)
T ss_dssp TTTEES------------CC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTT
T ss_pred CCCcee------------eecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccc
Confidence 322111 011235689999999997642 1357799999999999999999988754322110
Q ss_pred --c-cchhHHHHHHhhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHHhhc
Q 005226 637 --I-EVPDLVRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERIG 706 (707)
Q Consensus 637 --~-~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~~L~~i~ 706 (707)
. ......+.+........ .++.+.......+....+.+|+.+||+.||++||||+||++.|++|.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~-----~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~ 296 (303)
T 3hmm_A 229 YDLVPSDPSVEEMRKVVCEQK-----LRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLS 296 (303)
T ss_dssp TTTSCSSCCHHHHHHHHTTSC-----CCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHH
T ss_pred hhcccccchHHHHHHHHhccc-----CCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHH
Confidence 0 00001111111111110 01111111112345567889999999999999999999999999874
No 6
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=3.6e-50 Score=412.75 Aligned_cols=241 Identities=23% Similarity=0.369 Sum_probs=191.8
Q ss_pred ceecccCeeEEEEEEeC-CCceEEEEEcCCC--chhhHHHHHHHHHHHHhcCCCceeeeEEEEEc----CCcceEEEEee
Q 005226 413 YVLGKSGLGIVYKVVLG-NGIPVAVRRLGEG--GEQRHREFVTEVQAIAKVKHPNIVKLRAYYWA----PDEKLLISDFI 485 (707)
Q Consensus 413 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~----~~~~~lV~e~~ 485 (707)
..||+|+||+||+|... ++..||+|++... .....+.|.+|++++++++|||||+++++|.+ ++..|+|||||
T Consensus 32 ~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvmEy~ 111 (290)
T 3fpq_A 32 IEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELM 111 (290)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEEECC
T ss_pred eEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEEeCC
Confidence 37999999999999964 6889999998654 33445789999999999999999999999865 24578999999
Q ss_pred cCCChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCC--ceecCCCCCCeEEcC-CCCeEEeccccccccc
Q 005226 486 SNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRK--FVHGDIKPSNILLDN-DFQPYISDFGLSRLIN 562 (707)
Q Consensus 486 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~--iiHrDlk~~NIll~~-~~~~kl~DfGla~~~~ 562 (707)
++|+|.++++... .+++..+..|+.||+.||+|||+ ++ ||||||||+|||++. ++.+||+|||+|+...
T Consensus 112 ~gg~L~~~l~~~~-----~l~~~~~~~~~~qi~~aL~ylH~---~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~ 183 (290)
T 3fpq_A 112 TSGTLKTYLKRFK-----VMKIKVLRSWCRQILKGLQFLHT---RTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR 183 (290)
T ss_dssp CSCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHT---SSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCC
T ss_pred CCCCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHH---CCCCEEecccChhheeEECCCCCEEEEeCcCCEeCC
Confidence 9999999998643 69999999999999999999999 55 999999999999985 7999999999997533
Q ss_pred ccCCCCCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchhH
Q 005226 563 ITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDL 642 (707)
Q Consensus 563 ~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~ 642 (707)
... .....||+.|||||++. ..++.++|||||||++|||+||+.||..... ...+
T Consensus 184 ~~~------------------~~~~~GTp~YmAPE~~~--~~y~~~~DiwSlGvilyelltg~~Pf~~~~~-----~~~~ 238 (290)
T 3fpq_A 184 ASF------------------AKAVIGTPEFMAPEMYE--EKYDESVDVYAFGMCMLEMATSEYPYSECQN-----AAQI 238 (290)
T ss_dssp TTS------------------BEESCSSCCCCCGGGGG--TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSS-----HHHH
T ss_pred CCc------------------cCCcccCccccCHHHcC--CCCCcHHHHHHHHHHHHHHHHCCCCCCCCCc-----HHHH
Confidence 110 02356899999999865 4589999999999999999999999964321 1222
Q ss_pred HHHHHhhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 005226 643 VRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSE 700 (707)
Q Consensus 643 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~ 700 (707)
...+....... .++ .....++.+++.+||+.||++|||++|+++
T Consensus 239 ~~~i~~~~~~~-----~~~---------~~~~~~~~~li~~~L~~dP~~R~s~~e~l~ 282 (290)
T 3fpq_A 239 YRRVTSGVKPA-----SFD---------KVAIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp HHHHTTTCCCG-----GGG---------GCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHHHHcCCCCC-----CCC---------ccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 22222221110 001 111235789999999999999999999975
No 7
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=1.7e-50 Score=423.32 Aligned_cols=243 Identities=21% Similarity=0.316 Sum_probs=200.2
Q ss_pred ceecccCeeEEEEEEeC-CCceEEEEEcCCCchhhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCcceEEEEeecCCChH
Q 005226 413 YVLGKSGLGIVYKVVLG-NGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLA 491 (707)
Q Consensus 413 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL~ 491 (707)
+.||+|+||+||+|... +|+.||||++........+.+.+|+++|++++|||||++++++.+++..|+|||||++|+|.
T Consensus 80 ~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg~L~ 159 (346)
T 4fih_A 80 IKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT 159 (346)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCCTTEEHH
T ss_pred EEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCCCCcHH
Confidence 36999999999999975 78999999997655555577899999999999999999999999999999999999999999
Q ss_pred HHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEecccccccccccCCCCCCC
Q 005226 492 NALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSS 571 (707)
Q Consensus 492 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~ 571 (707)
+++... .+++.++..|+.||+.||+|||+ ++||||||||+|||++.++.+||+|||+|+.........
T Consensus 160 ~~l~~~------~l~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~--- 227 (346)
T 4fih_A 160 DIVTHT------RMNEEQIAAVCLAVLQALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR--- 227 (346)
T ss_dssp HHHHHS------CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCB---
T ss_pred HHHHcC------CCCHHHHHHHHHHHHHHHHHHHH---CCcccccCCHHHEEECCCCCEEEecCcCceecCCCCCcc---
Confidence 999753 49999999999999999999999 899999999999999999999999999998765322111
Q ss_pred CCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchhHHHHHHhhcc
Q 005226 572 GGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVRWVKKGFE 651 (707)
Q Consensus 572 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~ 651 (707)
....||+.|||||++.. ..|+.++|||||||++|||++|++||.... .......+.....
T Consensus 228 -------------~~~~GTp~YmAPEvl~~-~~y~~~~DiWSlGvilyeml~G~~PF~~~~------~~~~~~~i~~~~~ 287 (346)
T 4fih_A 228 -------------KSLVGTPYWMAPELISR-LPYGPEVDIWSLGIMVIEMVDGEPPYFNEP------PLKAMKMIRDNLP 287 (346)
T ss_dssp -------------CCCCSCGGGCCHHHHTT-CCBCTHHHHHHHHHHHHHHHHSSCTTTTSC------HHHHHHHHHHSSC
T ss_pred -------------cccccCcCcCCHHHHCC-CCCCcHHHHHHHHHHHHHHHHCCCCCCCcC------HHHHHHHHHcCCC
Confidence 23468999999999764 678999999999999999999999996532 1223333322221
Q ss_pred ccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 005226 652 EENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSE 700 (707)
Q Consensus 652 ~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~ 700 (707)
.... .......++.+|+.+||..||++|||++|+++
T Consensus 288 ~~~~-------------~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~ 323 (346)
T 4fih_A 288 PRLK-------------NLHKVSPSLKGFLDRLLVRDPAQRATAAELLK 323 (346)
T ss_dssp CCCS-------------CGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred CCCC-------------ccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 1111 01122345789999999999999999999875
No 8
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=9.2e-51 Score=429.43 Aligned_cols=257 Identities=27% Similarity=0.415 Sum_probs=204.9
Q ss_pred ccceecccCeeEEEEEEeCC------CceEEEEEcCCCc-hhhHHHHHHHHHHHHhcCC-CceeeeEEEEEcC-CcceEE
Q 005226 411 SAYVLGKSGLGIVYKVVLGN------GIPVAVRRLGEGG-EQRHREFVTEVQAIAKVKH-PNIVKLRAYYWAP-DEKLLI 481 (707)
Q Consensus 411 ~~~~lG~G~~g~Vy~~~~~~------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H-~niv~l~~~~~~~-~~~~lV 481 (707)
..+.||+|+||.||+|.+.. ++.||||+++... ....++|.+|+++|++++| ||||+++|+|.++ +..++|
T Consensus 68 l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~~~~~iV 147 (353)
T 4ase_A 68 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVI 147 (353)
T ss_dssp EEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCCEEE
T ss_pred EeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecCCEEEEE
Confidence 35689999999999998532 3679999997653 3445789999999999965 9999999999765 567999
Q ss_pred EEeecCCChHHHHhCCCC-----------CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCe
Q 005226 482 SDFISNGNLANALRGRNG-----------QPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQP 550 (707)
Q Consensus 482 ~e~~~~gsL~~~l~~~~~-----------~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~ 550 (707)
||||++|+|.++|+.... .....++|..++.|+.|||+||+|||+ ++||||||||+|||+++++.+
T Consensus 148 ~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~---~~iiHRDLK~~NILl~~~~~v 224 (353)
T 4ase_A 148 VEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVV 224 (353)
T ss_dssp EECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCE
T ss_pred EEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhh---CCeecCccCccceeeCCCCCE
Confidence 999999999999976432 113458999999999999999999999 899999999999999999999
Q ss_pred EEecccccccccccCCCCCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCC
Q 005226 551 YISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPEL 629 (707)
Q Consensus 551 kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~ellt-g~~P~~ 629 (707)
||+|||+|+........ .......||+.|||||++.. ..++.++|||||||++|||+| |+.||.
T Consensus 225 Ki~DFGlar~~~~~~~~--------------~~~~~~~gt~~ymAPE~l~~-~~y~~ksDVwS~Gv~l~El~t~G~~Pf~ 289 (353)
T 4ase_A 225 KICDFGLARDIYKDPDY--------------VRKGDARLPLKWMAPETIFD-RVYTIQSDVWSFGVLLWEIFSLGASPYP 289 (353)
T ss_dssp EECCCGGGSCTTTCTTS--------------EEETTEEECGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHTTTSCCSST
T ss_pred EECcchhhhhcccCCCc--------------eeeccccccccccCHHHHhc-CCCCCcccEeehHHHHHHHHhCCCCCCC
Confidence 99999999876432211 11123467999999999765 788999999999999999998 899997
Q ss_pred CCCCCCCccchhHHHHHHhhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHHhh
Q 005226 630 SPTTSTSIEVPDLVRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERI 705 (707)
Q Consensus 630 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~~L~~i 705 (707)
..... ..+...+....+...+ .....++.+++.+||+.||++||||+||++.|+++
T Consensus 290 ~~~~~-----~~~~~~i~~g~~~~~p---------------~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~l 345 (353)
T 4ase_A 290 GVKID-----EEFCRRLKEGTRMRAP---------------DYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 345 (353)
T ss_dssp TCCCS-----HHHHHHHHHTCCCCCC---------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CCCHH-----HHHHHHHHcCCCCCCC---------------ccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHH
Confidence 54321 2334444443332221 11234577899999999999999999999999876
No 9
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=2.7e-50 Score=420.60 Aligned_cols=250 Identities=21% Similarity=0.253 Sum_probs=197.1
Q ss_pred cceecccCeeEEEEEEeC-CCceEEEEEcCCCchhhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCcceEEEEeecCCCh
Q 005226 412 AYVLGKSGLGIVYKVVLG-NGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNL 490 (707)
Q Consensus 412 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL 490 (707)
.+.||+|+||.||+|+.. +|+.||||+++.... +.+|+.++++++|||||++++++.+++..|+|||||++|+|
T Consensus 63 ~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg~L 137 (336)
T 4g3f_A 63 QPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSL 137 (336)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCCTTCBH
T ss_pred CcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccCCCcH
Confidence 347999999999999964 689999999975422 24699999999999999999999999999999999999999
Q ss_pred HHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCC-CeEEecccccccccccCCCCC
Q 005226 491 ANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDF-QPYISDFGLSRLINITGNNPS 569 (707)
Q Consensus 491 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~-~~kl~DfGla~~~~~~~~~~~ 569 (707)
.++|+..+ .+++..+..|+.||+.||+|||+ ++||||||||+|||++.++ .+||+|||+|+..........
T Consensus 138 ~~~l~~~~-----~l~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~~ 209 (336)
T 4g3f_A 138 GQLIKQMG-----CLPEDRALYYLGQALEGLEYLHT---RRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKS 209 (336)
T ss_dssp HHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHT---TTEECSCCCGGGEEECTTSCCEEECCCTTCEEC--------
T ss_pred HHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHH---CCceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCcccc
Confidence 99998653 59999999999999999999999 8999999999999999987 699999999987753321111
Q ss_pred CCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchhHHHHHHhh
Q 005226 570 SSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVRWVKKG 649 (707)
Q Consensus 570 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~ 649 (707)
. .......||+.|||||++.+ ..++.++|||||||++|||+||++||...... .+...+...
T Consensus 210 ~-----------~~~~~~~GT~~YmAPE~~~~-~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~------~~~~~i~~~ 271 (336)
T 4g3f_A 210 L-----------LTGDYIPGTETHMAPEVVMG-KPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRG------PLCLKIASE 271 (336)
T ss_dssp ---------------CCCCCCGGGCCHHHHTT-CCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCS------CCHHHHHHS
T ss_pred e-----------ecCCccccCccccCHHHHCC-CCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHH------HHHHHHHcC
Confidence 0 01123468999999999765 77899999999999999999999999764332 112222111
Q ss_pred ccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHHhh
Q 005226 650 FEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERI 705 (707)
Q Consensus 650 ~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~~L~~i 705 (707)
..++.+ ........+.+++.+||+.||++|||+.|+++.|...
T Consensus 272 ---~~~~~~----------~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~ 314 (336)
T 4g3f_A 272 ---PPPIRE----------IPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKA 314 (336)
T ss_dssp ---CCGGGG----------SCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred ---CCCchh----------cCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHH
Confidence 111000 0112234578999999999999999999999887653
No 10
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=1.8e-50 Score=423.81 Aligned_cols=244 Identities=25% Similarity=0.331 Sum_probs=193.0
Q ss_pred ceecccCeeEEEEEEeC-CCceEEEEEcCCC--chhhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCcceEEEEeecCCC
Q 005226 413 YVLGKSGLGIVYKVVLG-NGIPVAVRRLGEG--GEQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGN 489 (707)
Q Consensus 413 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gs 489 (707)
+.||+|+||+||+|+.. +|+.||||++... .....+.|.+|++++++++|||||++++++.+++..|+||||+++|+
T Consensus 30 ~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmEy~~gg~ 109 (350)
T 4b9d_A 30 QKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGD 109 (350)
T ss_dssp EEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTCB
T ss_pred EEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEeCCCCCc
Confidence 47999999999999964 7899999998754 33445789999999999999999999999999999999999999999
Q ss_pred hHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEecccccccccccCCCCC
Q 005226 490 LANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPS 569 (707)
Q Consensus 490 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~ 569 (707)
|.++|...+ ...+++.++..|+.||+.||+|||+ ++||||||||+|||++.++.+||+|||+|+........
T Consensus 110 L~~~i~~~~---~~~~~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~-- 181 (350)
T 4b9d_A 110 LFKRINAQK---GVLFQEDQILDWFVQICLALKHVHD---RKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVEL-- 181 (350)
T ss_dssp HHHHHHHTT---TCCCCHHHHHHHHHHHHHHHHHHHH---TTCEETTCCGGGEEECTTCCEEECSTTEESCCCHHHHH--
T ss_pred HHHHHHHcC---CCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCCHHHEEECCCCCEEEcccccceeecCCccc--
Confidence 999997543 2357999999999999999999999 89999999999999999999999999999866422100
Q ss_pred CCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchhHHHHHHhh
Q 005226 570 SSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVRWVKKG 649 (707)
Q Consensus 570 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~ 649 (707)
.....||+.|||||++.+ ..++.++|||||||++|||+||+.||.... ...+...+...
T Consensus 182 --------------~~~~~GT~~YmAPE~l~~-~~y~~~~DiwSlGvilyemltG~~PF~~~~------~~~~~~~i~~~ 240 (350)
T 4b9d_A 182 --------------ARACIGTPYYLSPEICEN-KPYNNKSDIWALGCVLYELCTLKHAFEAGS------MKNLVLKIISG 240 (350)
T ss_dssp --------------HHHHHSCCTTCCHHHHTT-CCCCHHHHHHHHHHHHHHHHHSSCSCCCSS------HHHHHHHHHHT
T ss_pred --------------ccccCCCccccCHHHHCC-CCCCcHHHHHHHHHHHHHHHHCCCCCCCcC------HHHHHHHHHcC
Confidence 023468999999999765 778999999999999999999999996532 12222222221
Q ss_pred ccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 005226 650 FEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSE 700 (707)
Q Consensus 650 ~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~ 700 (707)
... +.. .....++.+|+.+||+.||++|||++|+++
T Consensus 241 ~~~--~~~-------------~~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 276 (350)
T 4b9d_A 241 SFP--PVS-------------LHYSYDLRSLVSQLFKRNPRDRPSVNSILE 276 (350)
T ss_dssp CCC--CCC-------------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred CCC--CCC-------------ccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 110 100 112345789999999999999999999975
No 11
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=3.5e-49 Score=423.55 Aligned_cols=243 Identities=21% Similarity=0.316 Sum_probs=200.5
Q ss_pred ceecccCeeEEEEEEeC-CCceEEEEEcCCCchhhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCcceEEEEeecCCChH
Q 005226 413 YVLGKSGLGIVYKVVLG-NGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLA 491 (707)
Q Consensus 413 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL~ 491 (707)
+.||+|+||.||+|... +|+.||||++........+.+.+|+++|++++|||||++++++.+++..|+|||||++|+|.
T Consensus 157 ~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~~gG~L~ 236 (423)
T 4fie_A 157 IKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT 236 (423)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTEEHH
T ss_pred eEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCCCCCcHH
Confidence 47999999999999964 78999999997665555577999999999999999999999999999999999999999999
Q ss_pred HHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEecccccccccccCCCCCCC
Q 005226 492 NALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSS 571 (707)
Q Consensus 492 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~ 571 (707)
++++.. .+++.++..|+.||+.||+|||+ ++||||||||+|||++.++.+||+|||+|+.+.......
T Consensus 237 ~~i~~~------~l~e~~~~~~~~qil~aL~ylH~---~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~~~--- 304 (423)
T 4fie_A 237 DIVTHT------RMNEEQIAAVCLAVLQALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR--- 304 (423)
T ss_dssp HHHHHS------CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSTTTEEECTTCCEEECCCTTCEECCSSCCCB---
T ss_pred HHHhcc------CCCHHHHHHHHHHHHHHHHHHHH---CCeecccCCHHHEEEcCCCCEEEecCccceECCCCCccc---
Confidence 999754 49999999999999999999999 899999999999999999999999999998765322111
Q ss_pred CCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchhHHHHHHhhcc
Q 005226 572 GGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVRWVKKGFE 651 (707)
Q Consensus 572 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~ 651 (707)
....||+.|||||++.. ..|+.++|||||||++|||++|+.||.... .......+.....
T Consensus 305 -------------~~~~GTp~YmAPEvl~~-~~y~~~~DiWSlGvilyeml~G~~PF~~~~------~~~~~~~i~~~~~ 364 (423)
T 4fie_A 305 -------------KSLVGTPYWMAPELISR-LPYGPEVDIWSLGIMVIEMVDGEPPYFNEP------PLKAMKMIRDNLP 364 (423)
T ss_dssp -------------CCCEECTTTCCHHHHTT-CCBCTHHHHHHHHHHHHHHHHSSCTTTTSC------HHHHHHHHHHSCC
T ss_pred -------------cccccCcCcCCHHHHCC-CCCCcHHHHHHHHHHHHHHHHCCCCCCCcC------HHHHHHHHHcCCC
Confidence 23568999999999765 778999999999999999999999996532 1223333322221
Q ss_pred ccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 005226 652 EENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSE 700 (707)
Q Consensus 652 ~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~ 700 (707)
.... .......++.+|+.+||..||++|||+.|+++
T Consensus 365 ~~~~-------------~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~ 400 (423)
T 4fie_A 365 PRLK-------------NLHKVSPSLKGFLDRLLVRDPAQRATAAELLK 400 (423)
T ss_dssp CCCS-------------CTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred CCCc-------------ccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 1110 00112345789999999999999999999875
No 12
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=7.5e-49 Score=399.41 Aligned_cols=240 Identities=24% Similarity=0.339 Sum_probs=185.5
Q ss_pred ceecccCeeEEEEEEe-CCCceEEEEEcCCCc---hhhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCcceEEEEeecCC
Q 005226 413 YVLGKSGLGIVYKVVL-GNGIPVAVRRLGEGG---EQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNG 488 (707)
Q Consensus 413 ~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~g 488 (707)
+.||+|+||+||+|.. .+|+.||||++++.. ....+.+.+|++++++++|||||++++++.+++..|+||||+ +|
T Consensus 19 ~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmEy~-~g 97 (275)
T 3hyh_A 19 KTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA-GN 97 (275)
T ss_dssp EEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECC-CE
T ss_pred EEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEEeCC-CC
Confidence 4799999999999996 478999999987542 223467999999999999999999999999999999999999 68
Q ss_pred ChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEecccccccccccCCCC
Q 005226 489 NLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNP 568 (707)
Q Consensus 489 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~ 568 (707)
+|.+++...+ .+++.++..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+|+........
T Consensus 98 ~L~~~l~~~~-----~l~e~~~~~~~~qi~~al~ylH~---~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~~~- 168 (275)
T 3hyh_A 98 ELFDYIVQRD-----KMSEQEARRFFQQIISAVEYCHR---HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFL- 168 (275)
T ss_dssp EHHHHHHHSC-----SCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCTTTEEECTTCCEEECCSSCC----------
T ss_pred CHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHH---CCcccccCChHHeEECCCCCEEEeecCCCeecCCCCcc-
Confidence 9999997653 59999999999999999999999 89999999999999999999999999999865432111
Q ss_pred CCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchhHHHHHHh
Q 005226 569 SSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVRWVKK 648 (707)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~ 648 (707)
....||+.|+|||++.+...++.++||||+||++|||+||+.||.... ...+.+.+..
T Consensus 169 ----------------~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~------~~~~~~~i~~ 226 (275)
T 3hyh_A 169 ----------------KTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDES------IPVLFKNISN 226 (275)
T ss_dssp ----------------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHH
T ss_pred ----------------CCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCC------HHHHHHHHHc
Confidence 234689999999998764556789999999999999999999996421 1222222222
Q ss_pred hccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 005226 649 GFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSE 700 (707)
Q Consensus 649 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~ 700 (707)
. ...+.+. ...++.+++.+|++.||++|||++|+++
T Consensus 227 ~---~~~~p~~-------------~s~~~~~li~~~L~~dP~~R~s~~eil~ 262 (275)
T 3hyh_A 227 G---VYTLPKF-------------LSPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp T---CCCCCTT-------------SCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred C---CCCCCCC-------------CCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence 1 1111111 1235678999999999999999999986
No 13
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=3.6e-49 Score=407.17 Aligned_cols=243 Identities=20% Similarity=0.285 Sum_probs=198.0
Q ss_pred cceecccCeeEEEEEEe-CCCceEEEEEcCCCc---hhhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCcceEEEEeecC
Q 005226 412 AYVLGKSGLGIVYKVVL-GNGIPVAVRRLGEGG---EQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISN 487 (707)
Q Consensus 412 ~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~ 487 (707)
.+.||+|+||+||+|+. .+|+.||||++.+.. ....+.+.+|+++|++++|||||++++++.+++..|+||||+++
T Consensus 37 ~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivmEy~~g 116 (311)
T 4aw0_A 37 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKN 116 (311)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCTT
T ss_pred EEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCCC
Confidence 45899999999999996 478999999997542 23346789999999999999999999999999999999999999
Q ss_pred CChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEecccccccccccCCC
Q 005226 488 GNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNN 567 (707)
Q Consensus 488 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~~~ 567 (707)
|+|.+++...+ .+++..+..|+.||+.||+|||+ ++||||||||+|||++.++.+||+|||+|+.+......
T Consensus 117 G~L~~~i~~~~-----~l~e~~~~~~~~qi~~al~ylH~---~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~~ 188 (311)
T 4aw0_A 117 GELLKYIRKIG-----SFDETCTRFYTAEIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 188 (311)
T ss_dssp EEHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTTTC
T ss_pred CCHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCCc
Confidence 99999998653 59999999999999999999999 89999999999999999999999999999876532211
Q ss_pred CCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchhHHHHHH
Q 005226 568 PSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVRWVK 647 (707)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~ 647 (707)
.. .....||+.|||||++.. ..++.++||||+||++|||+||+.||.... ...+...+.
T Consensus 189 ~~--------------~~~~~GTp~YmAPEvl~~-~~y~~~~DiWSlGvilyeml~G~~PF~~~~------~~~~~~~i~ 247 (311)
T 4aw0_A 189 AR--------------ANSFVGTAQYVSPELLTE-KSACKSSDLWALGCIIYQLVAGLPPFRAGN------EGLIFAKII 247 (311)
T ss_dssp CC--------------BCCCCSCGGGCCHHHHHH-SCBCHHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHH
T ss_pred cc--------------ccCcccCcccCCHHHHcC-CCCCcHHHHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHH
Confidence 10 123468999999999765 678999999999999999999999996532 122222222
Q ss_pred hhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHH
Q 005226 648 KGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVS 699 (707)
Q Consensus 648 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~ 699 (707)
.. ...+.+ ....++.+|+.+|++.||++|||++|+.
T Consensus 248 ~~---~~~~p~-------------~~s~~~~dli~~lL~~dp~~R~t~~e~~ 283 (311)
T 4aw0_A 248 KL---EYDFPE-------------KFFPKARDLVEKLLVLDATKRLGCEEME 283 (311)
T ss_dssp HT---CCCCCT-------------TCCHHHHHHHHHHSCSSGGGSTTSGGGT
T ss_pred cC---CCCCCc-------------ccCHHHHHHHHHHccCCHhHCcChHHHc
Confidence 21 111111 1223567999999999999999999863
No 14
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=2.2e-48 Score=401.38 Aligned_cols=237 Identities=25% Similarity=0.266 Sum_probs=185.2
Q ss_pred cceecccCeeEEEEEEeC----CCceEEEEEcCCCc--hhhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCcceEEEEee
Q 005226 412 AYVLGKSGLGIVYKVVLG----NGIPVAVRRLGEGG--EQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFI 485 (707)
Q Consensus 412 ~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~ 485 (707)
.+.||+|+||+||+|+.. .++.||||+++... ......+.+|++++++++|||||++++++.+++..|+||||+
T Consensus 29 ~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivmEy~ 108 (304)
T 3ubd_A 29 LKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFL 108 (304)
T ss_dssp EEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEEEECCC
T ss_pred EEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEEEcC
Confidence 348999999999999852 46789999987642 223356889999999999999999999999999999999999
Q ss_pred cCCChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEecccccccccccC
Q 005226 486 SNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITG 565 (707)
Q Consensus 486 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~ 565 (707)
++|+|.+++...+ .+++.++..++.||+.||+|||+ ++||||||||+|||++.++.+||+|||+|+......
T Consensus 109 ~gg~L~~~l~~~~-----~l~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~ 180 (304)
T 3ubd_A 109 RGGDLFTRLSKEV-----MFTEEDVKFYLAELALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE 180 (304)
T ss_dssp TTCEEHHHHHHHC-----CCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCCGGGEEECTTSCEEEESSEEEEC-----
T ss_pred CCCCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHH---CCCcCCCCCHHHeEEcCCCCEEecccccceeccCCC
Confidence 9999999998653 69999999999999999999999 899999999999999999999999999998654322
Q ss_pred CCCCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchhHHHH
Q 005226 566 NNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVRW 645 (707)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~ 645 (707)
... ....||+.|||||++.. ..++.++||||+||++|||+||+.||..... ..+...
T Consensus 181 ~~~----------------~~~~GT~~YmAPE~~~~-~~y~~~~DiwSlGvilyemltG~~PF~~~~~------~~~~~~ 237 (304)
T 3ubd_A 181 KKA----------------YSFCGTVEYMAPEVVNR-RGHTQSADWWSFGVLMFEMLTGTLPFQGKDR------KETMTM 237 (304)
T ss_dssp CCC----------------CSCCCCGGGCCHHHHHT-SCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHH
T ss_pred ccc----------------cccccCcccCCHHHhcc-CCCCCCCcccchHHHHHHHHhCCCCCCCcCH------HHHHHH
Confidence 111 23467999999999765 7789999999999999999999999975321 222222
Q ss_pred HHhhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCCh
Q 005226 646 VKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRM 695 (707)
Q Consensus 646 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~ 695 (707)
+.. ....+.+ ....++.+++.+||+.||++|||+
T Consensus 238 i~~---~~~~~p~-------------~~s~~~~~li~~~L~~dP~~R~ta 271 (304)
T 3ubd_A 238 ILK---AKLGMPQ-------------FLSPEAQSLLRMLFKRNPANRLGA 271 (304)
T ss_dssp HHH---CCCCCCT-------------TSCHHHHHHHHHHTCSSGGGSTTC
T ss_pred HHc---CCCCCCC-------------cCCHHHHHHHHHHcccCHHHCCCC
Confidence 222 1111111 122456799999999999999985
No 15
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=3.9e-47 Score=393.71 Aligned_cols=256 Identities=24% Similarity=0.354 Sum_probs=182.6
Q ss_pred cceecccCeeEEEEEEeC-CCceEEEEEcCCCc-hhhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCc------------
Q 005226 412 AYVLGKSGLGIVYKVVLG-NGIPVAVRRLGEGG-EQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDE------------ 477 (707)
Q Consensus 412 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~------------ 477 (707)
.+.||+|+||+||+|+.. +|+.||||+++... ....+.+.+|+++|++++|||||++++++.+.+.
T Consensus 10 ~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~~~~~~ 89 (299)
T 4g31_A 10 IQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVY 89 (299)
T ss_dssp EEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC----------CEE
T ss_pred eeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccccCCCcE
Confidence 358999999999999964 78999999986543 3344779999999999999999999999876543
Q ss_pred ceEEEEeecCCChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEecccc
Q 005226 478 KLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGL 557 (707)
Q Consensus 478 ~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGl 557 (707)
.|+||||+++|+|.+++..... ....++..++.|+.||+.||+|||+ ++||||||||+|||++.++.+||+|||+
T Consensus 90 l~ivmE~~~gg~L~~~l~~~~~--~~~~~~~~~~~i~~qi~~al~ylH~---~~IiHRDlKp~NILl~~~~~vKl~DFGl 164 (299)
T 4g31_A 90 LYIQMQLCRKENLKDWMNGRCT--IEERERSVCLHIFLQIAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVKVGDFGL 164 (299)
T ss_dssp EEEEEECCCSCCHHHHHHTCCS--GGGSCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECCCCC
T ss_pred EEEEEecCCCCcHHHHHHhcCC--CChhHHHHHHHHHHHHHHHHHHHHH---CcCccccCcHHHeEECCCCcEEEccCcc
Confidence 5899999999999999986542 2346788899999999999999999 8999999999999999999999999999
Q ss_pred cccccccCCCCCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCc
Q 005226 558 SRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSI 637 (707)
Q Consensus 558 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~ 637 (707)
|+............ .............||+.|||||++.+ ..++.++|||||||++|||++ ||...
T Consensus 165 a~~~~~~~~~~~~~----~~~~~~~~~~~~~GT~~YmAPE~~~~-~~y~~~~DiwSlGvilyell~---Pf~~~------ 230 (299)
T 4g31_A 165 VTAMDQDEEEQTVL----TPMPAYARHTGQVGTKLYMSPEQIHG-NSYSHKVDIFSLGLILFELLY---PFSTQ------ 230 (299)
T ss_dssp C------------------------------CCCTTSCHHHHTT-CCCCTHHHHHHHHHHHHHHHS---CCSSH------
T ss_pred ceecCCCccccccc----cccccccccCCcccCccccCHHHHcC-CCCCCHHHHHHHHHHHHHHcc---CCCCc------
Confidence 98775433211110 00011112234568999999999765 778999999999999999996 76421
Q ss_pred cchhHHHHHHhhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 005226 638 EVPDLVRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSE 700 (707)
Q Consensus 638 ~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~ 700 (707)
.+....+........ .+.. ......+.+++.+||+.||++|||+.|+++
T Consensus 231 --~~~~~~~~~~~~~~~------p~~~------~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 279 (299)
T 4g31_A 231 --MERVRTLTDVRNLKF------PPLF------TQKYPCEYVMVQDMLSPSPMERPEAINIIE 279 (299)
T ss_dssp --HHHHHHHHHHHTTCC------CHHH------HHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred --cHHHHHHHHHhcCCC------CCCC------cccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 111111111111111 0111 122234568999999999999999999986
No 16
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=3.4e-45 Score=393.61 Aligned_cols=259 Identities=18% Similarity=0.265 Sum_probs=194.5
Q ss_pred ceecccCeeEEEEEEe-CCCceEEEEEcCCCc--hhhHHHHHHHHHHHHhcCCCceeeeEEEEEcC------CcceEEEE
Q 005226 413 YVLGKSGLGIVYKVVL-GNGIPVAVRRLGEGG--EQRHREFVTEVQAIAKVKHPNIVKLRAYYWAP------DEKLLISD 483 (707)
Q Consensus 413 ~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~------~~~~lV~e 483 (707)
+.||+|+||+||+|.. .+|+.||||+++... ....+.+.+|+++|++++|||||++++++... +..|+|||
T Consensus 60 ~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~~~ivmE 139 (398)
T 4b99_A 60 ETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLD 139 (398)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCCEEEEEE
T ss_pred EEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCEEEEEEe
Confidence 4899999999999996 479999999997543 33446788999999999999999999998643 56799999
Q ss_pred eecCCChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEecccccccccc
Q 005226 484 FISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINI 563 (707)
Q Consensus 484 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~ 563 (707)
||+ |+|.+++...+ .+++..+..|+.||+.||+|||+ ++||||||||+|||++.++.+||+|||+|+.+..
T Consensus 140 ~~~-g~L~~~i~~~~-----~l~~~~~~~~~~qil~al~ylH~---~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~~~ 210 (398)
T 4b99_A 140 LME-SDLHQIIHSSQ-----PLTLEHVRYFLYQLLRGLKYMHS---AQVIHRDLKPSNLLVNENCELKIGDFGMARGLCT 210 (398)
T ss_dssp CCS-EEHHHHHTSSS-----CCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTCCEEECCCTTCBCC--
T ss_pred CCC-CCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHH---CcCcCCCcCccccccCCCCCEEEeecceeeeccc
Confidence 995 78999998653 69999999999999999999999 8999999999999999999999999999987643
Q ss_pred cCCCCCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchhHH
Q 005226 564 TGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLV 643 (707)
Q Consensus 564 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~~ 643 (707)
....... ......||+.|+|||++.+...++.++||||+||++|||++|++||..... .+..
T Consensus 211 ~~~~~~~------------~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~------~~~l 272 (398)
T 4b99_A 211 SPAEHQY------------FMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNY------VHQL 272 (398)
T ss_dssp -----CC------------CCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSH------HHHH
T ss_pred Ccccccc------------ccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCH------HHHH
Confidence 2211110 113456899999999977656789999999999999999999999975322 1222
Q ss_pred HHHHhhccccCCCchhch--------HHHHhhh---------hhHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 005226 644 RWVKKGFEEENPLSDMVD--------AMLLQEV---------HAKKEVIAVFHLALACTEADPEVRPRMKNVSE 700 (707)
Q Consensus 644 ~~~~~~~~~~~~~~~~~d--------~~l~~~~---------~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~ 700 (707)
..+........ ..... ..+.... .......++.+|+.+||..||++|||++|+++
T Consensus 273 ~~I~~~~g~p~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 344 (398)
T 4b99_A 273 QLIMMVLGTPS--PAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALR 344 (398)
T ss_dssp HHHHHHHCCCC--GGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred HHHHHhcCCCC--hHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence 22211111000 00000 0000000 00012346789999999999999999999875
No 17
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=1.4e-44 Score=384.63 Aligned_cols=207 Identities=20% Similarity=0.278 Sum_probs=165.4
Q ss_pred cceecccCeeEEEEEEeC----CCceEEEEEcCCCchhhHHHHHHHHHHHHhc-CCCceeeeEEEEEcCCcceEEEEeec
Q 005226 412 AYVLGKSGLGIVYKVVLG----NGIPVAVRRLGEGGEQRHREFVTEVQAIAKV-KHPNIVKLRAYYWAPDEKLLISDFIS 486 (707)
Q Consensus 412 ~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lV~e~~~ 486 (707)
.+.||+|+||+||+|+.. .++.||||++..... ..++.+|+++|+++ +|||||++++++.++++.|+||||++
T Consensus 26 ~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~--~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~lvmE~~~ 103 (361)
T 4f9c_A 26 EDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSH--PIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIAMPYLE 103 (361)
T ss_dssp EEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTSC--HHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEEEEEECCC
T ss_pred EEEEecccCcEEEEEEEcccCCCCCEEEEEEEccccC--HHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEEEEEeCCC
Confidence 348999999999999853 578899999866533 25678999999998 79999999999999999999999999
Q ss_pred CCChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCC-CCeEEecccccccccccC
Q 005226 487 NGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDND-FQPYISDFGLSRLINITG 565 (707)
Q Consensus 487 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~-~~~kl~DfGla~~~~~~~ 565 (707)
+|+|.+++. .+++.++..++.||+.||+|||+ ++||||||||+|||++.+ +.+||+|||+|+......
T Consensus 104 g~~L~~~~~--------~l~~~~~~~~~~qll~al~ylH~---~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~~~ 172 (361)
T 4f9c_A 104 HESFLDILN--------SLSFQEVREYMLNLFKALKRIHQ---FGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTK 172 (361)
T ss_dssp CCCHHHHHT--------TCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEETTTTEEEECCCTTCEECTTCS
T ss_pred cccHHHHHc--------CCCHHHHHHHHHHHHHHHHHHHH---CCeEeCcCCHHHeEEeCCCCeEEECcCCCCcccCCcc
Confidence 999999994 38899999999999999999999 899999999999999877 799999999998654321
Q ss_pred CCCCCCC---------CCcCCCC---CCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Q 005226 566 NNPSSSG---------GFMGGAL---PYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSP 631 (707)
Q Consensus 566 ~~~~~~~---------~~~~~~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~ 631 (707)
....... .....+. .........||+.|+|||++.+...++.++||||+||++|||+||+.||...
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~ 250 (361)
T 4f9c_A 173 IELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKA 250 (361)
T ss_dssp CGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSCC
T ss_pred ccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCCC
Confidence 1000000 0000000 0001123468999999999877667899999999999999999999999653
No 18
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=2.1e-43 Score=395.12 Aligned_cols=243 Identities=25% Similarity=0.283 Sum_probs=191.4
Q ss_pred cceecccCeeEEEEEEeC-CCceEEEEEcCCCch---hhHHHH---HHHHHHHHhcCCCceeeeEEEEEcCCcceEEEEe
Q 005226 412 AYVLGKSGLGIVYKVVLG-NGIPVAVRRLGEGGE---QRHREF---VTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDF 484 (707)
Q Consensus 412 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~---~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~ 484 (707)
.++||+|+||.||+|+.. +|+.||||++.+... .....+ ..++.+++.++|||||++++++.+++..|+||||
T Consensus 194 ~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~lylVmEy 273 (689)
T 3v5w_A 194 HRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDL 273 (689)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEEEEECC
T ss_pred EEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEEEEEec
Confidence 468999999999999965 789999999865321 111223 3346677788999999999999999999999999
Q ss_pred ecCCChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEeccccccccccc
Q 005226 485 ISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINIT 564 (707)
Q Consensus 485 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~~ 564 (707)
++||+|.++|...+ .+++..+..++.||+.||+|||+ ++||||||||+|||++.+|++||+|||+|+.....
T Consensus 274 ~~GGdL~~~l~~~~-----~l~E~~a~~y~~qIl~aL~yLH~---~gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~~~ 345 (689)
T 3v5w_A 274 MNGGDLHYHLSQHG-----VFSEADMRFYAAEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK 345 (689)
T ss_dssp CCSCBHHHHHHHHC-----CCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCSGGGEEECTTSCEEECCCTTCEECSSC
T ss_pred CCCCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHH---CCccccCCchHHeEEeCCCCEEecccceeeecCCC
Confidence 99999999998653 69999999999999999999999 89999999999999999999999999999876422
Q ss_pred CCCCCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchhHHH
Q 005226 565 GNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVR 644 (707)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~ 644 (707)
.. ....||+.|||||++..+..++.++||||+||++|||++|++||...... +...+..
T Consensus 346 ~~------------------~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~---~~~~i~~ 404 (689)
T 3v5w_A 346 KP------------------HASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTK---DKHEIDR 404 (689)
T ss_dssp CC------------------CSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCC---CHHHHHH
T ss_pred CC------------------CCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH---HHHHHHH
Confidence 11 23468999999999876567899999999999999999999999753322 1111111
Q ss_pred HHHhhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCC-----hHHHH
Q 005226 645 WVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPR-----MKNVS 699 (707)
Q Consensus 645 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs-----~~~v~ 699 (707)
.+ ......+. .....++.+|+.+|+..||.+|++ ++||.
T Consensus 405 ~i---~~~~~~~p-------------~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~ 448 (689)
T 3v5w_A 405 MT---LTMAVELP-------------DSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVK 448 (689)
T ss_dssp HH---HHCCCCCC-------------TTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHT
T ss_pred hh---cCCCCCCC-------------ccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHh
Confidence 11 11111111 112345689999999999999998 56664
No 19
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=3e-43 Score=370.94 Aligned_cols=270 Identities=35% Similarity=0.561 Sum_probs=218.7
Q ss_pred cceecccCeeEEEEEEeCCCceEEEEEcCCCchhhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCcceEEEEeecCCChH
Q 005226 412 AYVLGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLA 491 (707)
Q Consensus 412 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL~ 491 (707)
.+.||+|+||.||+|...++..||||++........+.+.+|++++++++||||+++++++.+++..++||||+++|+|.
T Consensus 44 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 123 (321)
T 2qkw_B 44 KFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLK 123 (321)
T ss_dssp CCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCEEEEECCTTCBTG
T ss_pred cceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEEcCCCCcHH
Confidence 34799999999999998889999999988776666688999999999999999999999999999999999999999999
Q ss_pred HHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEecccccccccccCCCCCCC
Q 005226 492 NALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSS 571 (707)
Q Consensus 492 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~ 571 (707)
+++.... .....++|..++.++.||+.||+|||+ ++|+||||||+||+++.++.+||+|||+++.........
T Consensus 124 ~~l~~~~-~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~--- 196 (321)
T 2qkw_B 124 RHLYGSD-LPTMSMSWEQRLEICIGAARGLHYLHT---RAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTH--- 196 (321)
T ss_dssp GGSSSSC-CCSCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCSTTEEECTTCCEEECCCTTCEECSSSSCCC---
T ss_pred HHHhccC-CCccccCHHHHHHHHHHHHHHHHHhcC---CCeecCCCCHHHEEECCCCCEEEeecccccccccccccc---
Confidence 9997653 223469999999999999999999999 899999999999999999999999999998654221110
Q ss_pred CCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchhHHHHHHhhcc
Q 005226 572 GGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVRWVKKGFE 651 (707)
Q Consensus 572 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~ 651 (707)
......||+.|+|||++.. ..++.++||||||+++|||+||+.||...... +......|......
T Consensus 197 -----------~~~~~~gt~~y~aPE~~~~-~~~~~~~Di~slG~il~ell~g~~p~~~~~~~---~~~~~~~~~~~~~~ 261 (321)
T 2qkw_B 197 -----------LSTVVKGTLGYIDPEYFIK-GRLTEKSDVYSFGVVLFEVLCARSAIVQSLPR---EMVNLAEWAVESHN 261 (321)
T ss_dssp -----------CBCCCEEETTTCCHHHHHH-CBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSS---SCCCHHHHTHHHHT
T ss_pred -----------cccccCCCccccCHHHhcC-CCCCcccchHhHHHHHHHHHhCCCcccccCcH---HHHHHHHHhhhccc
Confidence 0123457899999998654 57889999999999999999999999865443 23344555443332
Q ss_pred ccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHHhh
Q 005226 652 EENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERI 705 (707)
Q Consensus 652 ~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~~L~~i 705 (707)
... +...+++.+... ........+.+++.+||+.||++|||+.+|++.|+.+
T Consensus 262 ~~~-~~~~~~~~~~~~-~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~ 313 (321)
T 2qkw_B 262 NGQ-LEQIVDPNLADK-IRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYA 313 (321)
T ss_dssp TTC-CCSSSSSSCTTC-SCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred ccc-HHHhcChhhccc-cCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHH
Confidence 221 234444333221 2355677899999999999999999999999999876
No 20
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=3.3e-43 Score=371.50 Aligned_cols=285 Identities=38% Similarity=0.600 Sum_probs=223.3
Q ss_pred ccchHHHHHhc-----cceecccCeeEEEEEEeCCCceEEEEEcCCCch-hhHHHHHHHHHHHHhcCCCceeeeEEEEEc
Q 005226 401 TFELDELLRAS-----AYVLGKSGLGIVYKVVLGNGIPVAVRRLGEGGE-QRHREFVTEVQAIAKVKHPNIVKLRAYYWA 474 (707)
Q Consensus 401 ~~~~~~~~~~~-----~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~ 474 (707)
.|.+.++.... .+.||+|+||.||+|...++..||||++..... .....|.+|++++++++||||+++++++.+
T Consensus 19 ~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~ 98 (326)
T 3uim_A 19 RFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMT 98 (326)
T ss_dssp ECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEECC
T ss_pred eecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEEec
Confidence 34444444433 358999999999999988899999999976532 223478999999999999999999999999
Q ss_pred CCcceEEEEeecCCChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEec
Q 005226 475 PDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISD 554 (707)
Q Consensus 475 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~D 554 (707)
++..++||||+++|+|.++++.... ....++|..+..|+.|++.||+|||+.+..+|+||||||+||+++.++.+||+|
T Consensus 99 ~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~D 177 (326)
T 3uim_A 99 PTERLLVYPYMANGSVASCLRERPE-SQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGD 177 (326)
T ss_dssp SSCCEEEEECCTTCBHHHHHHCCST-TCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEECC
T ss_pred CCceEEEEEeccCCCHHHHHHhccc-cCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEecc
Confidence 9999999999999999999987542 234699999999999999999999993223999999999999999999999999
Q ss_pred ccccccccccCCCCCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCC
Q 005226 555 FGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTS 634 (707)
Q Consensus 555 fGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~ 634 (707)
||+++......... .....||+.|+|||++.. ..++.++||||||+++|||+||+.||......
T Consensus 178 fg~~~~~~~~~~~~---------------~~~~~gt~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~ 241 (326)
T 3uim_A 178 FGLAKLMDYKDTHV---------------TTAVRGTIGHIAPEYLST-GKSSEKTDVFGYGVMLLELITGQRAFDLARLA 241 (326)
T ss_dssp CSSCEECCSSSSCE---------------ECCCCSCGGGCCHHHHHH-SEECHHHHHHHHHHHHHHHHHCCCSBCHHHHT
T ss_pred CccccccCcccccc---------------cccccCCcCccCHHHhcc-CCCCccccchhHHHHHHHHHhCCCcccccccc
Confidence 99998764322111 122347999999998654 56789999999999999999999999632111
Q ss_pred CCccchhHHHHHHhhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHHhh
Q 005226 635 TSIEVPDLVRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERI 705 (707)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~~L~~i 705 (707)
. .......+|+........ ...+++..+.. .........+.+++.+||+.||.+|||+++|++.|+..
T Consensus 242 ~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~ 309 (326)
T 3uim_A 242 N-DDDVMLLDWVKGLLKEKK-LEALVDVDLQG-NYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD 309 (326)
T ss_dssp T-TSCSBHHHHHTTTTSSCC-STTSSCTTCTT-SCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTS
T ss_pred c-ccchhHHHHHHHHhhchh-hhhhcChhhcc-ccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCc
Confidence 1 123356677766555443 24555544432 23456678899999999999999999999999999864
No 21
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=5.5e-42 Score=359.43 Aligned_cols=266 Identities=25% Similarity=0.406 Sum_probs=205.8
Q ss_pred cceecccCeeEEEEEEeC-CCceEEEEEcCCCchhhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCcceEEEEeecCCCh
Q 005226 412 AYVLGKSGLGIVYKVVLG-NGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNL 490 (707)
Q Consensus 412 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL 490 (707)
.+.||+|+||+||+|... ++..||+|++........+.|.+|++++++++||||+++++++.+++..++||||+++|+|
T Consensus 15 ~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L 94 (310)
T 3s95_A 15 GEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTL 94 (310)
T ss_dssp EEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCTTCBH
T ss_pred cceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEecCCCcH
Confidence 358999999999999975 6899999998776666678899999999999999999999999999999999999999999
Q ss_pred HHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEecccccccccccCCCCCC
Q 005226 491 ANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSS 570 (707)
Q Consensus 491 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~~ 570 (707)
.+++.... ..+++.++..|+.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++...........
T Consensus 95 ~~~l~~~~----~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 167 (310)
T 3s95_A 95 RGIIKSMD----SQYPWSQRVSFAKDIASGMAYLHS---MNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEG 167 (310)
T ss_dssp HHHHHHCC----TTSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSTTSEEECTTSCEEECCCTTCEECC--------
T ss_pred HHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCCcCeEEECCCCCEEEeecccceecccccccccc
Confidence 99998643 359999999999999999999999 89999999999999999999999999999876533221110
Q ss_pred CCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchhHHHHHHhhc
Q 005226 571 SGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVRWVKKGF 650 (707)
Q Consensus 571 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~ 650 (707)
.... ............||+.|+|||++.. ..++.++||||||+++|||++|..|+......................
T Consensus 168 ~~~~--~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (310)
T 3s95_A 168 LRSL--KKPDRKKRYTVVGNPYWMAPEMING-RSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDRYC 244 (310)
T ss_dssp --------------CCCCSCGGGCCHHHHTT-CCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHHHHTC
T ss_pred cccc--cccccccccccCCCcceeCHHHhcC-CCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhccccccC
Confidence 0000 0000000113468999999999765 778999999999999999999999986543321111111111111110
Q ss_pred cccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHHhhc
Q 005226 651 EEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERIG 706 (707)
Q Consensus 651 ~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~~L~~i~ 706 (707)
.......+.+++.+||+.||++|||++++++.|+.++
T Consensus 245 -------------------~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~ 281 (310)
T 3s95_A 245 -------------------PPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLR 281 (310)
T ss_dssp -------------------CTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred -------------------CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 1122345788999999999999999999999999874
No 22
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=6.3e-43 Score=394.29 Aligned_cols=246 Identities=24% Similarity=0.329 Sum_probs=200.1
Q ss_pred cceecccCeeEEEEEEeC-CCceEEEEEcCCCchhhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCcceEEEEeecCCCh
Q 005226 412 AYVLGKSGLGIVYKVVLG-NGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNL 490 (707)
Q Consensus 412 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL 490 (707)
.+.||+|+||+||+|... +|+.||+|++........+.+.+|+++|++++|||||++++++.+++..|+|||||++|+|
T Consensus 162 ~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~~~gg~L 241 (573)
T 3uto_A 162 HEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGEL 241 (573)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEECCCCCBH
T ss_pred EEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeecCCCcH
Confidence 458999999999999964 7899999999876666667889999999999999999999999999999999999999999
Q ss_pred HHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCC--CCeEEecccccccccccCCCC
Q 005226 491 ANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDND--FQPYISDFGLSRLINITGNNP 568 (707)
Q Consensus 491 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~--~~~kl~DfGla~~~~~~~~~~ 568 (707)
.++|.... ..+++.++..++.||+.||+|||+ ++|+||||||+|||++.+ +.+||+|||+|+.+.....
T Consensus 242 ~~~i~~~~----~~l~e~~~~~~~~qi~~al~ylH~---~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~~-- 312 (573)
T 3uto_A 242 FEKVADEH----NKMSEDEAVEYMRQVCKGLCHMHE---NNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQS-- 312 (573)
T ss_dssp HHHHTCTT----SCEEHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTSE--
T ss_pred HHHHHHhC----CCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCChhhccccCCCCCCEEEeeccceeEccCCCc--
Confidence 99997543 359999999999999999999999 899999999999999854 8999999999987642211
Q ss_pred CCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchhHHHHHHh
Q 005226 569 SSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVRWVKK 648 (707)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~ 648 (707)
.....||+.|+|||++.. ..++.++||||+||++|||++|+.||..... ......+..
T Consensus 313 ---------------~~~~~GT~~y~APEv~~~-~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~------~~~~~~i~~ 370 (573)
T 3uto_A 313 ---------------VKVTTGTAEFAAPEVAEG-KPVGYYTDMWSVGVLSYILLSGLSPFGGEND------DETLRNVKS 370 (573)
T ss_dssp ---------------EEEECSSGGGCCHHHHTT-CCBCHHHHHHHHHHHHHHHHHSCCSSCCSSH------HHHHHHHHT
T ss_pred ---------------eeeeEECccccCHHHhCC-CCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH------HHHHHHHHh
Confidence 123468999999999765 7789999999999999999999999975321 222222222
Q ss_pred hccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 005226 649 GFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSE 700 (707)
Q Consensus 649 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~ 700 (707)
. ...+..- .......++.+|+.+||+.||++|||+.|+++
T Consensus 371 ~---~~~~~~~---------~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~ 410 (573)
T 3uto_A 371 C---DWNMDDS---------AFSGISEDGKDFIRKLLLADPNTRMTIHQALE 410 (573)
T ss_dssp T---CCCCCSG---------GGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred C---CCCCCcc---------cccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 1 1110000 00112345679999999999999999999976
No 23
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=4.6e-42 Score=368.90 Aligned_cols=256 Identities=29% Similarity=0.448 Sum_probs=205.5
Q ss_pred cceecccCeeEEEEEEe--------CCCceEEEEEcCCCc-hhhHHHHHHHHHHHHhc-CCCceeeeEEEEEcCCcceEE
Q 005226 412 AYVLGKSGLGIVYKVVL--------GNGIPVAVRRLGEGG-EQRHREFVTEVQAIAKV-KHPNIVKLRAYYWAPDEKLLI 481 (707)
Q Consensus 412 ~~~lG~G~~g~Vy~~~~--------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lV 481 (707)
.+.||+|+||.||+|.. .++..||||+++... ....+.+.+|+++++++ +||||++++++|..++..++|
T Consensus 86 ~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~lv 165 (370)
T 2psq_A 86 GKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVI 165 (370)
T ss_dssp EEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSSSSCEEE
T ss_pred eeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccCCCEEEE
Confidence 45899999999999985 245679999997653 34457899999999999 899999999999999999999
Q ss_pred EEeecCCChHHHHhCCCC-----------CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCe
Q 005226 482 SDFISNGNLANALRGRNG-----------QPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQP 550 (707)
Q Consensus 482 ~e~~~~gsL~~~l~~~~~-----------~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~ 550 (707)
|||+++|+|.+++..... .....+++..++.++.||+.||+|||+ ++|+||||||+|||++.++.+
T Consensus 166 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~~~~ 242 (370)
T 2psq_A 166 VEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAARNVLVTENNVM 242 (370)
T ss_dssp EECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTCCE
T ss_pred EEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHh---CCeeccccchhhEEECCCCCE
Confidence 999999999999986531 123468999999999999999999999 899999999999999999999
Q ss_pred EEecccccccccccCCCCCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCC
Q 005226 551 YISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPEL 629 (707)
Q Consensus 551 kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~ellt-g~~P~~ 629 (707)
||+|||+++.......... .....+|+.|+|||++.. ..++.++|||||||++|||+| |+.||.
T Consensus 243 kl~DFG~a~~~~~~~~~~~--------------~~~~~~t~~y~aPE~~~~-~~~~~~~DvwslG~il~ellt~g~~p~~ 307 (370)
T 2psq_A 243 KIADFGLARDINNIDYYKK--------------TTNGRLPVKWMAPEALFD-RVYTHQSDVWSFGVLMWEIFTLGGSPYP 307 (370)
T ss_dssp EECCCSSCEETTCCCTTCT--------------TTTTTSCGGGCCHHHHHT-CCCCHHHHHHHHHHHHHHHHTTSCCSST
T ss_pred EEccccCCcccCcccceec--------------ccCCCcccceECHhHhcC-CCCCcHHHHHHHHHHHHHHHcCCCCCCC
Confidence 9999999986653221111 122345788999998765 678999999999999999999 999986
Q ss_pred CCCCCCCccchhHHHHHHhhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHHhhc
Q 005226 630 SPTTSTSIEVPDLVRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERIG 706 (707)
Q Consensus 630 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~~L~~i~ 706 (707)
... ...+...+........+ ......+.+++.+||+.||++||++.|+++.|+++.
T Consensus 308 ~~~------~~~~~~~~~~~~~~~~~---------------~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il 363 (370)
T 2psq_A 308 GIP------VEELFKLLKEGHRMDKP---------------ANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 363 (370)
T ss_dssp TCC------GGGHHHHHHTTCCCCCC---------------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCC------HHHHHHHHhcCCCCCCC---------------CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 532 22333333333222111 122345789999999999999999999999999863
No 24
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=1.6e-42 Score=365.65 Aligned_cols=264 Identities=26% Similarity=0.352 Sum_probs=201.2
Q ss_pred cceecccCeeEEEEEEeCCCceEEEEEcCCCchhhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCc----ceEEEEeecC
Q 005226 412 AYVLGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDE----KLLISDFISN 487 (707)
Q Consensus 412 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~----~~lV~e~~~~ 487 (707)
.+.||+|+||+||+|... ++.||||++....... ..+.+|+.++++++||||+++++++..... .++||||+++
T Consensus 29 ~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~~~~-~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv~e~~~~ 106 (322)
T 3soc_A 29 LEVKARGRFGCVWKAQLL-NEYVAVKIFPIQDKQS-WQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEK 106 (322)
T ss_dssp EEEEECSTTCEEEEEEET-TEEEEEEEECGGGHHH-HHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTT
T ss_pred hheecccCceEEEEEEEC-CCEEEEEEeecCchHH-HHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEEEecCCC
Confidence 348999999999999985 7899999997654333 556779999999999999999999987554 5999999999
Q ss_pred CChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCC----------CceecCCCCCCeEEcCCCCeEEecccc
Q 005226 488 GNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPR----------KFVHGDIKPSNILLDNDFQPYISDFGL 557 (707)
Q Consensus 488 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~----------~iiHrDlk~~NIll~~~~~~kl~DfGl 557 (707)
|+|.++++.. .++|..+..|+.|++.||+|||+ . +|+||||||+||+++.++.+||+|||+
T Consensus 107 g~L~~~l~~~------~~~~~~~~~i~~qi~~al~~LH~---~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg~ 177 (322)
T 3soc_A 107 GSLSDFLKAN------VVSWNELCHIAETMARGLAYLHE---DIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGL 177 (322)
T ss_dssp CBHHHHHHHC------CBCHHHHHHHHHHHHHHHHHHTC---CEEEETTEEECEEECSCCSGGGEEECTTCCEEECCCTT
T ss_pred CCHHHHHHhc------CCCHHHHHHHHHHHHHHHHHHHh---hccccccccCCCEEeCCCChHhEEECCCCeEEEccCCc
Confidence 9999999764 48999999999999999999999 6 999999999999999999999999999
Q ss_pred cccccccCCCCCCCCCCcCCCCCCCCccccccCccccCCCCCCCC----CCCCchhhHHHHHHHHHHHHhCCCCCCCCCC
Q 005226 558 SRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPG----NRPMQKWDVYSFGVVLLELLTGKSPELSPTT 633 (707)
Q Consensus 558 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~ 633 (707)
++.......... .....||+.|+|||++... ..++.++|||||||++|||+||+.||.....
T Consensus 178 a~~~~~~~~~~~--------------~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~ 243 (322)
T 3soc_A 178 ALKFEAGKSAGD--------------THGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVD 243 (322)
T ss_dssp CEEECTTSCCCC--------------CTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCC
T ss_pred ccccccccCccc--------------cccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcc
Confidence 987653322111 1234579999999987642 2445688999999999999999999976543
Q ss_pred CCCccc-------hhHHHHHHhhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHHhhc
Q 005226 634 STSIEV-------PDLVRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERIG 706 (707)
Q Consensus 634 ~~~~~~-------~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~~L~~i~ 706 (707)
...... .....+......... ...+. ..........++.+++.+||+.||++|||+++|++.|++|.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~----~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 317 (322)
T 3soc_A 244 EYMLPFEEEIGQHPSLEDMQEVVVHKKK--RPVLR----DYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQ 317 (322)
T ss_dssp CCCCTTHHHHCSSCCHHHHHHHHTTSCC--CCCCC----GGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred hhccchhhhhccCCchhhhhhhhhcccC--CCCcc----ccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 211110 011111111111110 00001 11112344567899999999999999999999999999875
No 25
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=3e-42 Score=353.67 Aligned_cols=250 Identities=26% Similarity=0.418 Sum_probs=204.3
Q ss_pred cceecccCeeEEEEEEeCCCceEEEEEcCCCchhhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCcceEEEEeecCCChH
Q 005226 412 AYVLGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLA 491 (707)
Q Consensus 412 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL~ 491 (707)
.+.||+|+||.||+|...++..||+|++....... +++.+|++++++++||||+++++++.+++..++||||+++|+|.
T Consensus 15 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~-~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 93 (269)
T 4hcu_A 15 VQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE-EDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLS 93 (269)
T ss_dssp EEEEEECSSCEEEEEEETTTEEEEEEEECTTSBCH-HHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCTTCBHH
T ss_pred eheecCCCccEEEEEEecCCCeEEEEEecccccCH-HHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeCCCCcHH
Confidence 35899999999999999889999999998764443 67999999999999999999999999999999999999999999
Q ss_pred HHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEecccccccccccCCCCCCC
Q 005226 492 NALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSS 571 (707)
Q Consensus 492 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~ 571 (707)
+++.... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++.........
T Consensus 94 ~~l~~~~----~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~--- 163 (269)
T 4hcu_A 94 DYLRTQR----GLFAAETLLGMCLDVCEGMAYLEE---ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTS--- 163 (269)
T ss_dssp HHHHTTT----TCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHHS---
T ss_pred HHHHhcC----cccCHHHHHHHHHHHHHHHHHHHh---CCeecCCcchheEEEcCCCCEEecccccccccccccccc---
Confidence 9997643 358999999999999999999999 899999999999999999999999999998654221111
Q ss_pred CCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCCCccchhHHHHHHhhc
Q 005226 572 GGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTSIEVPDLVRWVKKGF 650 (707)
Q Consensus 572 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~ 650 (707)
.....++..|+|||.+.. ..++.++||||||+++|||++ |+.||.... .......+....
T Consensus 164 ------------~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~------~~~~~~~~~~~~ 224 (269)
T 4hcu_A 164 ------------STGTKFPVKWASPEVFSF-SRYSSKSDVWSFGVLMWEVFSEGKIPYENRS------NSEVVEDISTGF 224 (269)
T ss_dssp ------------TTSTTCCGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC------HHHHHHHHHTTC
T ss_pred ------------ccCcccccccCCHHHhcC-CCCCchhhhHHHHHHHHHHhcCCCCCCCCCC------HHHHHHHHhcCc
Confidence 122345778999998654 678899999999999999999 999986432 123333333222
Q ss_pred cccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHHhhc
Q 005226 651 EEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERIG 706 (707)
Q Consensus 651 ~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~~L~~i~ 706 (707)
....+ ......+.+++.+||+.||++||+++++++.|+++.
T Consensus 225 ~~~~~---------------~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~ 265 (269)
T 4hcu_A 225 RLYKP---------------RLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIA 265 (269)
T ss_dssp CCCCC---------------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred cCCCC---------------CcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHH
Confidence 11111 112345789999999999999999999999999875
No 26
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=6.5e-42 Score=361.29 Aligned_cols=252 Identities=27% Similarity=0.485 Sum_probs=201.5
Q ss_pred cceecccCeeEEEEEEeC----CCceEEEEEcCCC-chhhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCcceEEEEeec
Q 005226 412 AYVLGKSGLGIVYKVVLG----NGIPVAVRRLGEG-GEQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFIS 486 (707)
Q Consensus 412 ~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~ 486 (707)
.+.||+|+||.||+|... .+..||||+++.. .....+.|.+|++++++++||||+++++++.+++..++||||++
T Consensus 54 ~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 133 (325)
T 3kul_A 54 EKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYME 133 (325)
T ss_dssp EEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEEEEECCT
T ss_pred eeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEEEeeCCC
Confidence 458999999999999974 3456999999765 33445789999999999999999999999999999999999999
Q ss_pred CCChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEecccccccccccCC
Q 005226 487 NGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGN 566 (707)
Q Consensus 487 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~~ 566 (707)
+|+|.++++... ..+++..++.|+.||+.||+|||+ .+|+||||||+||+++.++.+||+|||+++.......
T Consensus 134 ~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 206 (325)
T 3kul_A 134 NGSLDTFLRTHD----GQFTIMQLVGMLRGVGAGMRYLSD---LGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPD 206 (325)
T ss_dssp TCBHHHHHHTTT----TCSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCSSCEECC----
T ss_pred CCcHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHH---CCeeCCCCCcceEEECCCCCEEECCCCcccccccCcc
Confidence 999999997653 359999999999999999999999 8999999999999999999999999999987653321
Q ss_pred CCCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCCCccchhHHHH
Q 005226 567 NPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTSIEVPDLVRW 645 (707)
Q Consensus 567 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~ 645 (707)
... ......+|+.|+|||++.. ..++.++||||||+++|||++ |+.||.... ...+...
T Consensus 207 ~~~-------------~~~~~~~t~~y~aPE~~~~-~~~~~~~Di~slG~il~ell~~g~~p~~~~~------~~~~~~~ 266 (325)
T 3kul_A 207 AAY-------------TTTGGKIPIRWTAPEAIAF-RTFSSASDVWSFGVVMWEVLAYGERPYWNMT------NRDVISS 266 (325)
T ss_dssp CCE-------------ECC---CCGGGSCHHHHHH-CEECHHHHHHHHHHHHHHHHTTSCCTTTTSC------HHHHHHH
T ss_pred cee-------------eccCCCCcccccCHhHhcC-CCCCcHHHHHHHHHHHHHHHcCCCCCcccCC------HHHHHHH
Confidence 111 0012334778999998654 677899999999999999999 999986432 2233333
Q ss_pred HHhhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHHhh
Q 005226 646 VKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERI 705 (707)
Q Consensus 646 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~~L~~i 705 (707)
+........+ ......+.+++..||+.||++||++++|++.|+.+
T Consensus 267 ~~~~~~~~~~---------------~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l 311 (325)
T 3kul_A 267 VEEGYRLPAP---------------MGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDAL 311 (325)
T ss_dssp HHTTCCCCCC---------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHcCCCCCCC---------------CCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 3332221111 12234678999999999999999999999999986
No 27
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=2e-41 Score=354.77 Aligned_cols=251 Identities=29% Similarity=0.425 Sum_probs=194.6
Q ss_pred cceecccCeeEEEEEEeCCCceEEEEEcCCCc--hhhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCcceEEEEeecCCC
Q 005226 412 AYVLGKSGLGIVYKVVLGNGIPVAVRRLGEGG--EQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGN 489 (707)
Q Consensus 412 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gs 489 (707)
.+.||+|+||+||+|.. ++..||||++.... ....++|.+|++++++++||||+++++++...+..++||||+++|+
T Consensus 42 ~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~ 120 (309)
T 3p86_A 42 KEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGS 120 (309)
T ss_dssp EEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEEECCTTCB
T ss_pred eeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEEecCCCCc
Confidence 45899999999999987 68889999987653 3345689999999999999999999999999999999999999999
Q ss_pred hHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCC--ceecCCCCCCeEEcCCCCeEEecccccccccccCCC
Q 005226 490 LANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRK--FVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNN 567 (707)
Q Consensus 490 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~--iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~~~ 567 (707)
|.+++..... ...+++..++.++.||+.||+|||+ .+ |+||||||+||+++.++.+||+|||+++.......
T Consensus 121 L~~~l~~~~~--~~~~~~~~~~~i~~qi~~aL~~LH~---~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~~~- 194 (309)
T 3p86_A 121 LYRLLHKSGA--REQLDERRRLSMAYDVAKGMNYLHN---RNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFL- 194 (309)
T ss_dssp HHHHHHSTTH--HHHSCHHHHHHHHHHHHHHHHHHHT---SSSCCCCTTCCGGGEEECTTCCEEECCCC-----------
T ss_pred HHHHHhhcCC--CCCCCHHHHHHHHHHHHHHHHHHHc---CCCCEECCCCChhhEEEeCCCcEEECCCCCCcccccccc-
Confidence 9999986431 1248999999999999999999999 77 99999999999999999999999999975432211
Q ss_pred CCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchhHHHHHH
Q 005226 568 PSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVRWVK 647 (707)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~ 647 (707)
......||+.|+|||++.. ..++.++||||||+++|||++|+.||..... ......+.
T Consensus 195 ---------------~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~elltg~~Pf~~~~~------~~~~~~~~ 252 (309)
T 3p86_A 195 ---------------SSKSAAGTPEWMAPEVLRD-EPSNEKSDVYSFGVILWELATLQQPWGNLNP------AQVVAAVG 252 (309)
T ss_dssp ----------------------CCTTSCHHHHTT-CCCCTTHHHHHHHHHHHHHHHCCCTTTTSCH------HHHHHHHH
T ss_pred ---------------ccccCCCCccccChhhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCH------HHHHHHHH
Confidence 1123457999999999765 6678999999999999999999999965321 12222221
Q ss_pred hhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHHhh
Q 005226 648 KGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERI 705 (707)
Q Consensus 648 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~~L~~i 705 (707)
...... ... ......+.+++.+||+.||++|||++++++.|+.+
T Consensus 253 ~~~~~~-~~~-------------~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~ 296 (309)
T 3p86_A 253 FKCKRL-EIP-------------RNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPL 296 (309)
T ss_dssp HSCCCC-CCC-------------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred hcCCCC-CCC-------------ccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 111111 001 11224578999999999999999999999999886
No 28
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=7.9e-42 Score=367.38 Aligned_cols=252 Identities=26% Similarity=0.497 Sum_probs=193.1
Q ss_pred cceecccCeeEEEEEEeC----CCceEEEEEcCCC-chhhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCcceEEEEeec
Q 005226 412 AYVLGKSGLGIVYKVVLG----NGIPVAVRRLGEG-GEQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFIS 486 (707)
Q Consensus 412 ~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~ 486 (707)
.+.||+|+||.||+|... ++..||||+++.. .....++|.+|++++++++||||+++++++.+.+..++||||++
T Consensus 50 ~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 129 (373)
T 2qol_A 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYME 129 (373)
T ss_dssp CEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCT
T ss_pred eeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEEEEeCCC
Confidence 458999999999999864 5788999999765 33445789999999999999999999999999999999999999
Q ss_pred CCChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEecccccccccccCC
Q 005226 487 NGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGN 566 (707)
Q Consensus 487 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~~ 566 (707)
+|+|.++++... ..+++.+++.|+.||+.||+|||+ .+|+||||||+||+++.++.+||+|||+++.......
T Consensus 130 ~~sL~~~l~~~~----~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 202 (373)
T 2qol_A 130 NGSLDSFLRKHD----AQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPE 202 (373)
T ss_dssp TCBHHHHHHTTT----TCSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCC-----------
T ss_pred CCcHHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHHH---CCeeCCCCCcceEEEcCCCCEEECcCccccccccCCc
Confidence 999999998653 358999999999999999999999 8999999999999999999999999999987653221
Q ss_pred CCCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCCCccchhHHHH
Q 005226 567 NPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTSIEVPDLVRW 645 (707)
Q Consensus 567 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~ 645 (707)
.... .....++..|+|||++.. ..++.++||||||+++|||++ |+.||.... ...+.+.
T Consensus 203 ~~~~-------------~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~------~~~~~~~ 262 (373)
T 2qol_A 203 AAYT-------------TRGGKIPIRWTSPEAIAY-RKFTSASDVWSYGIVLWEVMSYGERPYWEMS------NQDVIKA 262 (373)
T ss_dssp ------------------------CTTSCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTC-CTTTTCC------HHHHHHH
T ss_pred ccee-------------ccCCCcCCCccChhhhcc-CCcCchhcHHHHHHHHHHHHhCCCCCCCCCC------HHHHHHH
Confidence 1110 011234678999998664 678899999999999999998 999986432 2233333
Q ss_pred HHhhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHHhh
Q 005226 646 VKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERI 705 (707)
Q Consensus 646 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~~L~~i 705 (707)
+........+ ......+.+++.+||+.||++||++.+|++.|+.+
T Consensus 263 i~~~~~~~~~---------------~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~ 307 (373)
T 2qol_A 263 VDEGYRLPPP---------------MDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307 (373)
T ss_dssp HHTTEECCCC---------------TTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHcCCCCCCC---------------ccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHH
Confidence 3332221111 12235678999999999999999999999999876
No 29
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=4.4e-41 Score=351.97 Aligned_cols=266 Identities=33% Similarity=0.527 Sum_probs=208.2
Q ss_pred ceecccCeeEEEEEEeCCCceEEEEEcCCCc----hhhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCcceEEEEeecCC
Q 005226 413 YVLGKSGLGIVYKVVLGNGIPVAVRRLGEGG----EQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNG 488 (707)
Q Consensus 413 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~g 488 (707)
+.||+|+||.||+|.. ++..||||++.... ....+.|.+|++++++++||||+++++++.+.+..++||||+++|
T Consensus 37 ~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 115 (307)
T 2nru_A 37 NKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNG 115 (307)
T ss_dssp CEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTC
T ss_pred CccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCCeEEEEEEEecCCceEEEEEecCCC
Confidence 5799999999999987 68899999986532 233577999999999999999999999999999999999999999
Q ss_pred ChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEecccccccccccCCCC
Q 005226 489 NLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNP 568 (707)
Q Consensus 489 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~ 568 (707)
+|.+++..... ...++|..+..|+.||+.||+|||+ .+|+||||||+||+++.++.+||+|||+++.........
T Consensus 116 ~L~~~l~~~~~--~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~ 190 (307)
T 2nru_A 116 SLLDRLSCLDG--TPPLSWHMRCKIAQGAANGINFLHE---NHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTV 190 (307)
T ss_dssp BHHHHHHTGGG--CCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTCCEEECCCTTCEECCSCSSCE
T ss_pred cHHHHHHhccC--CCCCCHHHHHHHHHHHHHHHHHHhc---CCeecCCCCHHHEEEcCCCcEEEeecccccccccccccc
Confidence 99999975431 2469999999999999999999999 899999999999999999999999999998654221110
Q ss_pred CCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchhHHHHHHh
Q 005226 569 SSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVRWVKK 648 (707)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~ 648 (707)
......||+.|+|||.+. ..++.++||||||+++|||++|+.||....... .+..+...
T Consensus 191 --------------~~~~~~g~~~y~aPE~~~--~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~-----~~~~~~~~ 249 (307)
T 2nru_A 191 --------------MTSRIVGTTAYMAPEALR--GEITPKSDIYSFGVVLLEIITGLPAVDEHREPQ-----LLLDIKEE 249 (307)
T ss_dssp --------------ECSSCCSCGGGCCHHHHT--TEECTHHHHHHHHHHHHHHHHCCCSBCTTBSSS-----BTTHHHHH
T ss_pred --------------cccccCCCcCcCChHHhc--CCCCccchhHHHHHHHHHHHHCCCCcccCcchH-----HHHHHHHH
Confidence 012245799999999865 357899999999999999999999997643321 11122222
Q ss_pred hccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHHhhcC
Q 005226 649 GFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERIGT 707 (707)
Q Consensus 649 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~~L~~i~~ 707 (707)
.......+.+.+++.+. .........+.+++.+||+.||.+||++++|++.|+++++
T Consensus 250 ~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~~ 306 (307)
T 2nru_A 250 IEDEEKTIEDYIDKKMN--DADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA 306 (307)
T ss_dssp HHTTSCCHHHHSCSSCS--CCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC-
T ss_pred hhhhhhhhhhhcccccc--ccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhc
Confidence 11222222222322221 1234556778999999999999999999999999999863
No 30
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=3.3e-41 Score=355.84 Aligned_cols=241 Identities=23% Similarity=0.313 Sum_probs=196.6
Q ss_pred ceecccCeeEEEEEEe-CCCceEEEEEcCCC--chhhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCcceEEEEeecCCC
Q 005226 413 YVLGKSGLGIVYKVVL-GNGIPVAVRRLGEG--GEQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGN 489 (707)
Q Consensus 413 ~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gs 489 (707)
+.||+|+||.||+|.. .+|+.||||++... .....+.+.+|++++++++||||+++++++.+.+..++||||+++|+
T Consensus 21 ~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~~~~ 100 (328)
T 3fe3_A 21 KTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGE 100 (328)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTTCB
T ss_pred EEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEECCCCCc
Confidence 4799999999999997 58899999998654 33345678899999999999999999999999999999999999999
Q ss_pred hHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEecccccccccccCCCCC
Q 005226 490 LANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPS 569 (707)
Q Consensus 490 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~ 569 (707)
|.+++...+ .+++..+..++.||+.||+|||+ .+|+||||||+||+++.++.+||+|||+++.......
T Consensus 101 L~~~l~~~~-----~l~~~~~~~~~~qi~~al~~lH~---~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~--- 169 (328)
T 3fe3_A 101 VFDYLVAHG-----RMKEKEARSKFRQIVSAVQYCHQ---KRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGK--- 169 (328)
T ss_dssp HHHHHHHHC-----CCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSCG---
T ss_pred HHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHH---CCEeccCCCHHHEEEcCCCCEEEeeccCceecCCCCc---
Confidence 999997643 58999999999999999999999 8999999999999999999999999999976542211
Q ss_pred CCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchhHHHHHHhh
Q 005226 570 SSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVRWVKKG 649 (707)
Q Consensus 570 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~ 649 (707)
.....||+.|+|||++......+.++|||||||++|||++|+.||.... ...+.+.+...
T Consensus 170 --------------~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~------~~~~~~~i~~~ 229 (328)
T 3fe3_A 170 --------------LDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN------LKELRERVLRG 229 (328)
T ss_dssp --------------GGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHC
T ss_pred --------------cccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCC------HHHHHHHHHhC
Confidence 1234579999999997764555689999999999999999999996532 11222222211
Q ss_pred ccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 005226 650 FEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSE 700 (707)
Q Consensus 650 ~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~ 700 (707)
..... ......+.+++.+|+..||.+|||++|+++
T Consensus 230 ---~~~~p-------------~~~s~~~~~li~~~L~~dP~~R~t~~eil~ 264 (328)
T 3fe3_A 230 ---KYRIP-------------FYMSTDCENLLKRFLVLNPIKRGTLEQIMK 264 (328)
T ss_dssp ---CCCCC-------------TTSCHHHHHHHHHHCCSSTTTSCCHHHHTT
T ss_pred ---CCCCC-------------CCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 11111 112245678999999999999999999975
No 31
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=8.6e-42 Score=350.03 Aligned_cols=251 Identities=27% Similarity=0.424 Sum_probs=203.1
Q ss_pred cceecccCeeEEEEEEeCCCceEEEEEcCCCchhhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCcceEEEEeecCCChH
Q 005226 412 AYVLGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLA 491 (707)
Q Consensus 412 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL~ 491 (707)
.+.||+|+||.||+|...++..||+|++....... +++.+|++++++++||||+++++++.+++..++||||+++|+|.
T Consensus 13 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~-~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 91 (268)
T 3sxs_A 13 LKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSE-DEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLL 91 (268)
T ss_dssp EEEEEEETTEEEEEEEETTTEEEEEEEECBTTBCH-HHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCTTCBHH
T ss_pred eeeeccCCCceEEEEEecCceeEEEEEeccCCCcH-HHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEccCCCcHH
Confidence 34799999999999999888899999997654443 67899999999999999999999999999999999999999999
Q ss_pred HHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEecccccccccccCCCCCCC
Q 005226 492 NALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSS 571 (707)
Q Consensus 492 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~ 571 (707)
+++.... ..+++..+..|+.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++.........
T Consensus 92 ~~l~~~~----~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~--- 161 (268)
T 3sxs_A 92 NYLRSHG----KGLEPSQLLEMCYDVCEGMAFLES---HQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVS--- 161 (268)
T ss_dssp HHHHHHG----GGCCHHHHHHHHHHHHHHHHHHHH---TTEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEEE---
T ss_pred HHHHHcC----CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCcCcceEEECCCCCEEEccCccceecchhhhhc---
Confidence 9997643 258999999999999999999999 899999999999999999999999999998654321110
Q ss_pred CCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCCCccchhHHHHHHhhc
Q 005226 572 GGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTSIEVPDLVRWVKKGF 650 (707)
Q Consensus 572 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~ 650 (707)
.....+|+.|+|||.+.. ..++.++||||||+++|||+| |+.||..... ......+....
T Consensus 162 ------------~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~------~~~~~~~~~~~ 222 (268)
T 3sxs_A 162 ------------SVGTKFPVKWSAPEVFHY-FKYSSKSDVWAFGILMWEVFSLGKMPYDLYTN------SEVVLKVSQGH 222 (268)
T ss_dssp ------------CCSCCCCGGGCCHHHHHH-SEEETTHHHHHHHHHHHHHHTTTCCTTTTSCH------HHHHHHHHTTC
T ss_pred ------------ccCCCcCcccCCHHHHhc-cCCchhhhhHHHHHHHHHHHcCCCCCccccCh------HHHHHHHHcCC
Confidence 012334778999998654 567899999999999999999 9999864321 12222222211
Q ss_pred cccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHHhhcC
Q 005226 651 EEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERIGT 707 (707)
Q Consensus 651 ~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~~L~~i~~ 707 (707)
....+ ......+.+++.+||+.||++|||++++++.|+.+++
T Consensus 223 ~~~~~---------------~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~ 264 (268)
T 3sxs_A 223 RLYRP---------------HLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLRE 264 (268)
T ss_dssp CCCCC---------------TTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC
T ss_pred CCCCC---------------CcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhh
Confidence 11111 1112357899999999999999999999999999863
No 32
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=3.9e-42 Score=370.69 Aligned_cols=252 Identities=27% Similarity=0.367 Sum_probs=202.9
Q ss_pred cceecccCeeEEEEEEeC-CCceEEEEEcCCCc-hhhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCcceEEEEeecCCC
Q 005226 412 AYVLGKSGLGIVYKVVLG-NGIPVAVRRLGEGG-EQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGN 489 (707)
Q Consensus 412 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gs 489 (707)
.+.||+|+||.||+|... +++.||||+++... .....+|.+|++++++++||||+++++++..++..++||||+++|+
T Consensus 119 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~g~ 198 (377)
T 3cbl_A 119 GEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGD 198 (377)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCTTCB
T ss_pred eeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEEcCCCCC
Confidence 458999999999999986 78999999987653 3334678999999999999999999999999999999999999999
Q ss_pred hHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEecccccccccccCCCCC
Q 005226 490 LANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPS 569 (707)
Q Consensus 490 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~ 569 (707)
|.++++... ..+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++..........
T Consensus 199 L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~~~ 271 (377)
T 3cbl_A 199 FLTFLRTEG----ARLRVKTLLQMVGDAAAGMEYLES---KCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAAS 271 (377)
T ss_dssp HHHHHHHHG----GGCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEECC
T ss_pred HHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHH---CCcCCcccCHHHEEEcCCCcEEECcCCCceecCCCceeec
Confidence 999997543 258999999999999999999999 8999999999999999999999999999986432110000
Q ss_pred CCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCCCccchhHHHHHHh
Q 005226 570 SSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTSIEVPDLVRWVKK 648 (707)
Q Consensus 570 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~ 648 (707)
.....++..|+|||.+.. ..++.++|||||||++|||+| |+.||.... .....+.+..
T Consensus 272 --------------~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~il~el~t~g~~p~~~~~------~~~~~~~~~~ 330 (377)
T 3cbl_A 272 --------------GGLRQVPVKWTAPEALNY-GRYSSESDVWSFGILLWETFSLGASPYPNLS------NQQTREFVEK 330 (377)
T ss_dssp --------------SSCCEEEGGGSCHHHHHH-CEEEHHHHHHHHHHHHHHHHTTSCCSSTTSC------HHHHHHHHHT
T ss_pred --------------CCCCCCCcCcCCHhHhcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCC------HHHHHHHHHc
Confidence 011234678999998654 567899999999999999999 999986432 2233333333
Q ss_pred hccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHHhhc
Q 005226 649 GFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERIG 706 (707)
Q Consensus 649 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~~L~~i~ 706 (707)
..+...+ ......+.+++.+||+.||++|||+++|++.|++++
T Consensus 331 ~~~~~~~---------------~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~ 373 (377)
T 3cbl_A 331 GGRLPCP---------------ELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIR 373 (377)
T ss_dssp TCCCCCC---------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCCCCC---------------CCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHH
Confidence 2221111 112345789999999999999999999999999874
No 33
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=4.5e-41 Score=350.21 Aligned_cols=243 Identities=23% Similarity=0.362 Sum_probs=196.9
Q ss_pred ceecccCeeEEEEEEe-CCCceEEEEEcCCCchhhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCcceEEEEeecCCChH
Q 005226 413 YVLGKSGLGIVYKVVL-GNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLA 491 (707)
Q Consensus 413 ~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL~ 491 (707)
+.||+|+||+||+|.. .+++.||||++........+.+.+|+.++++++||||+++++++..++..++||||+++|+|.
T Consensus 26 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 105 (297)
T 3fxz_A 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLT 105 (297)
T ss_dssp EEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTCBHH
T ss_pred eeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEECCCCCCHH
Confidence 4799999999999995 578999999987655555577899999999999999999999999999999999999999999
Q ss_pred HHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEecccccccccccCCCCCCC
Q 005226 492 NALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSS 571 (707)
Q Consensus 492 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~ 571 (707)
+++... .+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+++........
T Consensus 106 ~~~~~~------~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~---- 172 (297)
T 3fxz_A 106 DVVTET------CMDEGQIAAVCRECLQALEFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK---- 172 (297)
T ss_dssp HHHHHS------CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCC----
T ss_pred HHHhhc------CCCHHHHHHHHHHHHHHHHHHHh---CCceeCCCCHHHEEECCCCCEEEeeCCCceecCCcccc----
Confidence 999854 48999999999999999999999 89999999999999999999999999999865432211
Q ss_pred CCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchhHHHHHHhhcc
Q 005226 572 GGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVRWVKKGFE 651 (707)
Q Consensus 572 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~ 651 (707)
.....||+.|+|||++.. ..++.++|||||||++|||++|+.||..... ............
T Consensus 173 ------------~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~ell~g~~pf~~~~~------~~~~~~~~~~~~ 233 (297)
T 3fxz_A 173 ------------RSTMVGTPYWMAPEVVTR-KAYGPKVDIWSLGIMAIEMIEGEPPYLNENP------LRALYLIATNGT 233 (297)
T ss_dssp ------------BCCCCSCGGGCCHHHHHC-SCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH------HHHHHHHHHHCS
T ss_pred ------------cCCccCCcCccChhhhcC-CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH------HHHHHHHHhCCC
Confidence 123457999999999765 6789999999999999999999999964321 111111111111
Q ss_pred ccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 005226 652 EENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSE 700 (707)
Q Consensus 652 ~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~ 700 (707)
.... ........+.+++.+||+.||++|||++|+++
T Consensus 234 ~~~~-------------~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 269 (297)
T 3fxz_A 234 PELQ-------------NPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQ 269 (297)
T ss_dssp CCCS-------------CGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred CCCC-------------CccccCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 0000 01122345789999999999999999999975
No 34
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=3e-41 Score=358.35 Aligned_cols=243 Identities=21% Similarity=0.295 Sum_probs=189.8
Q ss_pred ceecccCeeEEEEEEe-CCCceEEEEEcCCCch-hhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCcceEEEEeecCCCh
Q 005226 413 YVLGKSGLGIVYKVVL-GNGIPVAVRRLGEGGE-QRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNL 490 (707)
Q Consensus 413 ~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL 490 (707)
+.||+|+||+||+|.. .+|+.||||++..... .....+.+|++++++++||||+++++++.+.+..++||||+++|+|
T Consensus 16 ~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~E~~~gg~L 95 (347)
T 3zgw_A 16 ETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGGEL 95 (347)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCTTCBH
T ss_pred EEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEEeCCCCCCH
Confidence 4899999999999996 5789999999866532 2346789999999999999999999999999999999999999999
Q ss_pred HHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEecccccccccccCCCCCC
Q 005226 491 ANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSS 570 (707)
Q Consensus 491 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~~ 570 (707)
.+++.... .+++..+..++.||+.||+|||+ .+|+||||||+||+++.++.+||+|||++..........
T Consensus 96 ~~~l~~~~-----~l~~~~~~~i~~qi~~aL~~LH~---~givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~-- 165 (347)
T 3zgw_A 96 FDYIISQD-----RLSEEETRVVFRQIVSAVAYVHS---QGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYH-- 165 (347)
T ss_dssp HHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBC----------
T ss_pred HHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCccHHHEEEcCCCCEEEEeccCcccccCCCCcc--
Confidence 99997643 59999999999999999999999 899999999999999999999999999987654221110
Q ss_pred CCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchhHHHHHHhhc
Q 005226 571 SGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVRWVKKGF 650 (707)
Q Consensus 571 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~ 650 (707)
.....||+.|+|||++.....++.++|||||||++|||++|+.||.... ...+...+...
T Consensus 166 -------------~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~------~~~~~~~i~~~- 225 (347)
T 3zgw_A 166 -------------LQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDN------VMALYKKIMRG- 225 (347)
T ss_dssp -------------------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHT-
T ss_pred -------------ccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCC------HHHHHHHHHcC-
Confidence 1234579999999997764556899999999999999999999996421 12222222221
Q ss_pred cccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 005226 651 EEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSE 700 (707)
Q Consensus 651 ~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~ 700 (707)
...+... ....+.+++.+||+.||++|||++|+++
T Consensus 226 --~~~~p~~-------------~s~~~~~li~~~L~~dP~~Rps~~eil~ 260 (347)
T 3zgw_A 226 --KYDVPKW-------------LSPSSILLLQQMLQVDPKKRISMKNLLN 260 (347)
T ss_dssp --CCCCCTT-------------CCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred --CCCCCCC-------------CCHHHHHHHHHHcccCHhHCcCHHHHhc
Confidence 1111111 1234678999999999999999999985
No 35
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=7.1e-41 Score=349.20 Aligned_cols=258 Identities=24% Similarity=0.334 Sum_probs=194.9
Q ss_pred ceecccCeeEEEEEEeCCCceEEEEEcCCCchhhHHHHHHHHHHHHh--cCCCceeeeEEEEEcC----CcceEEEEeec
Q 005226 413 YVLGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAK--VKHPNIVKLRAYYWAP----DEKLLISDFIS 486 (707)
Q Consensus 413 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~H~niv~l~~~~~~~----~~~~lV~e~~~ 486 (707)
+.||+|+||+||+|.. +++.||||++.... ...+.+|.+++.. ++||||+++++++... ...++||||++
T Consensus 14 ~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~---~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~lv~e~~~ 89 (301)
T 3q4u_A 14 ECVGKGRYGEVWRGSW-QGENVAVKIFSSRD---EKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHE 89 (301)
T ss_dssp EEEEECSSEEEEEEEE-TTEEEEEEEECGGG---HHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEEEECCCT
T ss_pred EeeccCCCcEEEEEEE-CCEEEEEEEecccc---chhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEEehhhcc
Confidence 4799999999999998 78899999986542 2556667777766 7999999999997653 34789999999
Q ss_pred CCChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHh--------hcCCCCceecCCCCCCeEEcCCCCeEEeccccc
Q 005226 487 NGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLH--------ECSPRKFVHGDIKPSNILLDNDFQPYISDFGLS 558 (707)
Q Consensus 487 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH--------~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla 558 (707)
+|+|.++++.. .+++..+++|+.||+.||+||| + ++|+||||||+|||++.++.+||+|||++
T Consensus 90 ~g~L~~~l~~~------~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~---~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a 160 (301)
T 3q4u_A 90 MGSLYDYLQLT------TLDTVSCLRIVLSIASGLAHLHIEIFGTQGK---PAIAHRDLKSKNILVKKNGQCCIADLGLA 160 (301)
T ss_dssp TCBHHHHHTTC------CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCB---CEEECSCCCGGGEEECTTSCEEECCCTTC
T ss_pred CCCHHHHHhhc------ccCHHHHHHHHHHHHHHHHHHHHhhhhccCC---CCeecCCCChHhEEEcCCCCEEEeeCCCe
Confidence 99999999643 5999999999999999999999 6 89999999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCcCCCCCCCCccccccCccccCCCCCCCCC-----CCCchhhHHHHHHHHHHHHhC---------
Q 005226 559 RLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGN-----RPMQKWDVYSFGVVLLELLTG--------- 624 (707)
Q Consensus 559 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-----~~~~~~DV~S~Gv~l~elltg--------- 624 (707)
+........... ......||+.|+|||++.... .++.++|||||||++|||+||
T Consensus 161 ~~~~~~~~~~~~------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~ 228 (301)
T 3q4u_A 161 VMHSQSTNQLDV------------GNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVED 228 (301)
T ss_dssp EEEETTTTEEEC------------CCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCC
T ss_pred eecccccccccc------------cccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCcccccc
Confidence 866533221100 012346799999999976532 334799999999999999999
Q ss_pred -CCCCCCCCCCCCccchhHHHHHHhhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHH
Q 005226 625 -KSPELSPTTSTSIEVPDLVRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLE 703 (707)
Q Consensus 625 -~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~~L~ 703 (707)
+.||........ ....+......... . .... ...........+.+++.+||+.||++|||+.+|++.|+
T Consensus 229 ~~~pf~~~~~~~~-~~~~~~~~~~~~~~-~---~~~~-----~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~ 298 (301)
T 3q4u_A 229 YKPPFYDVVPNDP-SFEDMRKVVCVDQQ-R---PNIP-----NRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLT 298 (301)
T ss_dssp CCCTTTTTSCSSC-CHHHHHHHHTTSCC-C---CCCC-----GGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHH
T ss_pred ccccccccCCCCc-chhhhhHHHhccCC-C---CCCC-----hhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHh
Confidence 777765433211 11111111111100 0 0110 11112345677899999999999999999999999999
Q ss_pred hh
Q 005226 704 RI 705 (707)
Q Consensus 704 ~i 705 (707)
+|
T Consensus 299 ~i 300 (301)
T 3q4u_A 299 KI 300 (301)
T ss_dssp HH
T ss_pred cc
Confidence 86
No 36
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=1.3e-40 Score=350.82 Aligned_cols=244 Identities=22% Similarity=0.323 Sum_probs=198.9
Q ss_pred cceecccCeeEEEEEEeC-CCceEEEEEcCCCchhhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCcceEEEEeecCCCh
Q 005226 412 AYVLGKSGLGIVYKVVLG-NGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNL 490 (707)
Q Consensus 412 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL 490 (707)
.+.||+|+||.||+|... +|+.||||++........+.+.+|+.++++++||||+++++++...+..++||||+++|+|
T Consensus 50 ~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 129 (321)
T 2c30_A 50 YVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGAL 129 (321)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEECCCCSCBH
T ss_pred cEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEecCCCCCH
Confidence 347999999999999976 7999999999766555557899999999999999999999999999999999999999999
Q ss_pred HHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEecccccccccccCCCCCC
Q 005226 491 ANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSS 570 (707)
Q Consensus 491 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~~ 570 (707)
.+++... .+++..+..++.||+.||+|||+ .+|+||||||+||+++.++.+||+|||+++........
T Consensus 130 ~~~l~~~------~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~--- 197 (321)
T 2c30_A 130 TDIVSQV------RLNEEQIATVCEAVLQALAYLHA---QGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPK--- 197 (321)
T ss_dssp HHHHTTC------CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCC---
T ss_pred HHHHHhc------CCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCcEEEeeeeeeeecccCccc---
Confidence 9999753 48999999999999999999999 89999999999999999999999999999865432111
Q ss_pred CCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchhHHHHHHhhc
Q 005226 571 SGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVRWVKKGF 650 (707)
Q Consensus 571 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~ 650 (707)
.....||+.|+|||++.. ..++.++||||||+++|||++|+.||.... .......+....
T Consensus 198 -------------~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~~g~~pf~~~~------~~~~~~~~~~~~ 257 (321)
T 2c30_A 198 -------------RKSLVGTPYWMAPEVISR-SLYATEVDIWSLGIMVIEMVDGEPPYFSDS------PVQAMKRLRDSP 257 (321)
T ss_dssp -------------BCCCCSCGGGCCHHHHTT-CCBCTHHHHHHHHHHHHHHHHSSCTTTTSC------HHHHHHHHHHSS
T ss_pred -------------cccccCCccccCHhhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHhcCC
Confidence 023457999999999764 678899999999999999999999996432 112222222211
Q ss_pred cccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 005226 651 EEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSE 700 (707)
Q Consensus 651 ~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~ 700 (707)
..... ........+.+++.+||+.||++|||+.++++
T Consensus 258 ~~~~~-------------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 294 (321)
T 2c30_A 258 PPKLK-------------NSHKVSPVLRDFLERMLVRDPQERATAQELLD 294 (321)
T ss_dssp CCCCT-------------TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred CCCcC-------------ccccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 11100 00112345778999999999999999999986
No 37
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=1.1e-41 Score=376.35 Aligned_cols=250 Identities=24% Similarity=0.465 Sum_probs=203.4
Q ss_pred cceecccCeeEEEEEEeCCCceEEEEEcCCCchhhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCcceEEEEeecCCChH
Q 005226 412 AYVLGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLA 491 (707)
Q Consensus 412 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL~ 491 (707)
.+.||+|+||.||+|...++..||||+++..... .+.|.+|++++++++||||+++++++. .+..++||||+++|+|.
T Consensus 193 ~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~-~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e~~~~g~L~ 270 (454)
T 1qcf_A 193 EKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMS-VEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEFMAKGSLL 270 (454)
T ss_dssp EEEEECCSSEEEEEEEETTTEEEEEEEECTTSBC-HHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEECCCTTCBHH
T ss_pred EEEcccCCceEEEEEEECCccEEEEEEecCCCcc-HHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEeecCCCcHH
Confidence 4589999999999999988899999999865433 478999999999999999999999986 66789999999999999
Q ss_pred HHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEecccccccccccCCCCCCC
Q 005226 492 NALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSS 571 (707)
Q Consensus 492 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~ 571 (707)
++++... ...+++..++.++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++.........
T Consensus 271 ~~l~~~~---~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~~--- 341 (454)
T 1qcf_A 271 DFLKSDE---GSKQPLPKLIDFSAQIAEGMAFIEQ---RNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTA--- 341 (454)
T ss_dssp HHHHSHH---HHTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHHHT---
T ss_pred HHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCceec---
Confidence 9998542 1258899999999999999999999 899999999999999999999999999998764221100
Q ss_pred CCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCCCccchhHHHHHHhhc
Q 005226 572 GGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTSIEVPDLVRWVKKGF 650 (707)
Q Consensus 572 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~ 650 (707)
.....++..|+|||++.. ..++.++|||||||++|||+| |+.||.... .......+....
T Consensus 342 ------------~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~el~t~g~~P~~~~~------~~~~~~~i~~~~ 402 (454)
T 1qcf_A 342 ------------REGAKFPIKWTAPEAINF-GSFTIKSDVWSFGILLMEIVTYGRIPYPGMS------NPEVIRALERGY 402 (454)
T ss_dssp ------------TCSSSSCGGGSCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC------HHHHHHHHHHTC
T ss_pred ------------cCCCcccccccCHHHhcc-CCCCcHHHHHhHHHHHHHHHhCCCCCCCCCC------HHHHHHHHHcCC
Confidence 012234778999999754 678999999999999999999 999986432 223334443333
Q ss_pred cccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHHhhc
Q 005226 651 EEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERIG 706 (707)
Q Consensus 651 ~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~~L~~i~ 706 (707)
+...+ ......+.+++.+||+.||++||||++|++.|+.+.
T Consensus 403 ~~~~~---------------~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~ 443 (454)
T 1qcf_A 403 RMPRP---------------ENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFY 443 (454)
T ss_dssp CCCCC---------------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSS
T ss_pred CCCCC---------------CCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHH
Confidence 22211 122346789999999999999999999999999873
No 38
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=6.1e-41 Score=362.05 Aligned_cols=255 Identities=29% Similarity=0.446 Sum_probs=205.0
Q ss_pred cceecccCeeEEEEEEe--------CCCceEEEEEcCCCc-hhhHHHHHHHHHHHHhc-CCCceeeeEEEEEcCCcceEE
Q 005226 412 AYVLGKSGLGIVYKVVL--------GNGIPVAVRRLGEGG-EQRHREFVTEVQAIAKV-KHPNIVKLRAYYWAPDEKLLI 481 (707)
Q Consensus 412 ~~~lG~G~~g~Vy~~~~--------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lV 481 (707)
.+.||+|+||.||+|.. .++..||||++.... ....+.+.+|+++++++ +||||+++++++..++..++|
T Consensus 74 ~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~lv 153 (382)
T 3tt0_A 74 GKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVI 153 (382)
T ss_dssp EEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEE
T ss_pred eeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccCCceEEE
Confidence 45899999999999985 234679999987653 34457899999999999 999999999999999999999
Q ss_pred EEeecCCChHHHHhCCCC-----------CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCe
Q 005226 482 SDFISNGNLANALRGRNG-----------QPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQP 550 (707)
Q Consensus 482 ~e~~~~gsL~~~l~~~~~-----------~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~ 550 (707)
|||+++|+|.+++..... .....+++..++.|+.||+.||+|||+ .+|+||||||+|||++.++.+
T Consensus 154 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~ 230 (382)
T 3tt0_A 154 VEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS---KKCIHRDLAARNVLVTEDNVM 230 (382)
T ss_dssp EECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCE
T ss_pred EEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCcceEEEcCCCcE
Confidence 999999999999986542 112469999999999999999999999 899999999999999999999
Q ss_pred EEecccccccccccCCCCCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCC
Q 005226 551 YISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPEL 629 (707)
Q Consensus 551 kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~ellt-g~~P~~ 629 (707)
||+|||+++.......... .....+|+.|+|||++.. ..++.++|||||||++|||++ |+.||.
T Consensus 231 kL~DFG~a~~~~~~~~~~~--------------~~~~~~t~~y~aPE~~~~-~~~~~~~DiwslG~il~ellt~g~~p~~ 295 (382)
T 3tt0_A 231 KIADFGLARDIHHIDYYKK--------------TTNGRLPVKWMAPEALFD-RIYTHQSDVWSFGVLLWEIFTLGGSPYP 295 (382)
T ss_dssp EECSCSCCCCSSCCCTTCC--------------CTTCCCGGGGSCHHHHHS-CCCCHHHHHHHHHHHHHHHHTTSCCSST
T ss_pred EEcccCccccccccccccc--------------ccCCCCCcceeCHHHhcC-CCCCchhHHHHHHHHHHHHHhCCCCCCC
Confidence 9999999986643221111 122345789999998764 778999999999999999999 999986
Q ss_pred CCCCCCCccchhHHHHHHhhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHHhh
Q 005226 630 SPTTSTSIEVPDLVRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERI 705 (707)
Q Consensus 630 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~~L~~i 705 (707)
... ...+.+.+........+ .....++.+++.+||+.||++||++++|++.|+++
T Consensus 296 ~~~------~~~~~~~~~~~~~~~~~---------------~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~ 350 (382)
T 3tt0_A 296 GVP------VEELFKLLKEGHRMDKP---------------SNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 350 (382)
T ss_dssp TCC------HHHHHHHHHTTCCCCCC---------------SSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CCC------HHHHHHHHHcCCCCCCC---------------ccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 432 22334444333222211 11234578999999999999999999999999887
No 39
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=2.5e-41 Score=351.82 Aligned_cols=261 Identities=24% Similarity=0.420 Sum_probs=198.5
Q ss_pred ceecccCeeEEEEEEe-----CCCceEEEEEcCCCchhhHHHHHHHHHHHHhcCCCceeeeEEEEEcC--CcceEEEEee
Q 005226 413 YVLGKSGLGIVYKVVL-----GNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWAP--DEKLLISDFI 485 (707)
Q Consensus 413 ~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~~~lV~e~~ 485 (707)
+.||+|+||+||+|++ .+++.||||++........+.|.+|++++++++||||+++++++... ...++||||+
T Consensus 16 ~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~ 95 (295)
T 3ugc_A 16 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 95 (295)
T ss_dssp EEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSCEEEEECC
T ss_pred heeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCceEEEEEeC
Confidence 4799999999999984 36889999999877666668899999999999999999999999654 5589999999
Q ss_pred cCCChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEecccccccccccC
Q 005226 486 SNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITG 565 (707)
Q Consensus 486 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~ 565 (707)
++|+|.+++.... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++......
T Consensus 96 ~~~~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 168 (295)
T 3ugc_A 96 PYGSLRDYLQKHK----ERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK 168 (295)
T ss_dssp TTCBHHHHHHHCG----GGCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECCCCSCC------
T ss_pred CCCCHHHHHHhcc----cccCHHHHHHHHHHHHHHHHHHhc---CCcccCCCCHhhEEEcCCCeEEEccCcccccccCCc
Confidence 9999999998653 258999999999999999999999 899999999999999999999999999998765322
Q ss_pred CCCCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchhHHHH
Q 005226 566 NNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVRW 645 (707)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~ 645 (707)
.... ......++..|+|||.+.. ..++.++||||||+++|||+||..|+.... ......
T Consensus 169 ~~~~-------------~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~~l~~g~~~~~~~~-------~~~~~~ 227 (295)
T 3ugc_A 169 EFFK-------------VKEPGESPIFWYAPESLTE-SKFSVASDVWSFGVVLYELFTYIEKSKSPP-------AEFMRM 227 (295)
T ss_dssp --------------------CTTCGGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHHHTTCTTCSHH-------HHHHHH
T ss_pred ceee-------------eccCCCCccceeCcHHhcC-CCCChHHHHHHHHHHHHHHHhcccccCCCh-------HHHHhh
Confidence 1111 0122345778999998664 678999999999999999999999986421 011111
Q ss_pred HHhhccccCCCchhchHHHHh----h---hhhHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHHhhc
Q 005226 646 VKKGFEEENPLSDMVDAMLLQ----E---VHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERIG 706 (707)
Q Consensus 646 ~~~~~~~~~~~~~~~d~~l~~----~---~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~~L~~i~ 706 (707)
... .. ........+.. . .........+.+++.+||+.||++|||++++++.|+++.
T Consensus 228 ~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~ 290 (295)
T 3ugc_A 228 IGN----DK-QGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIR 290 (295)
T ss_dssp HCT----TC-CTHHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred hcC----cc-ccchhHHHHHHHHhccCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHH
Confidence 000 00 00110000000 0 001223456889999999999999999999999999874
No 40
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=1.6e-41 Score=378.50 Aligned_cols=250 Identities=28% Similarity=0.447 Sum_probs=204.8
Q ss_pred cceecccCeeEEEEEEeCC-CceEEEEEcCCCchhhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCcceEEEEeecCCCh
Q 005226 412 AYVLGKSGLGIVYKVVLGN-GIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNL 490 (707)
Q Consensus 412 ~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL 490 (707)
.+.||+|+||.||+|.+.. +..||||+++..... .++|.+|++++++++||||++++++|...+..++||||+++|+|
T Consensus 225 ~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~-~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~~~~g~L 303 (495)
T 1opk_A 225 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNL 303 (495)
T ss_dssp EEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSSC-HHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBH
T ss_pred eeEecCCCCeEEEEEEEcCCCeEEEEEEecCcccc-hHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEccCCCCH
Confidence 4589999999999999764 789999999865443 47899999999999999999999999999999999999999999
Q ss_pred HHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEecccccccccccCCCCCC
Q 005226 491 ANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSS 570 (707)
Q Consensus 491 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~~ 570 (707)
.++++... ...+++..++.|+.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++........
T Consensus 304 ~~~l~~~~---~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~--- 374 (495)
T 1opk_A 304 LDYLRECN---RQEVSAVVLLYMATQISSAMEYLEK---KNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYT--- 374 (495)
T ss_dssp HHHHHHSC---TTTSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECGGGCEEECCTTCEECCTTCCEE---
T ss_pred HHHHHhcC---cCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCChhhEEECCCCcEEEeecccceeccCCcee---
Confidence 99998643 2358999999999999999999999 89999999999999999999999999999876422110
Q ss_pred CCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCCCccchhHHHHHHhh
Q 005226 571 SGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTSIEVPDLVRWVKKG 649 (707)
Q Consensus 571 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~ 649 (707)
......++..|+|||++.. ..++.++|||||||++|||+| |+.||.... ...+.+.+...
T Consensus 375 ------------~~~~~~~~~~y~aPE~~~~-~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~------~~~~~~~~~~~ 435 (495)
T 1opk_A 375 ------------AHAGAKFPIKWTAPESLAY-NKFSIKSDVWAFGVLLWEIATYGMSPYPGID------LSQVYELLEKD 435 (495)
T ss_dssp ------------CCTTCCCCGGGCCHHHHHH-CEECHHHHHHHHHHHHHHHHTTSCCSSTTCC------GGGHHHHHHTT
T ss_pred ------------ecCCCcCCcceeCHhHHhc-CCCCcHHhHHhHHHHHHHHHhCCCCCCCCCC------HHHHHHHHHcC
Confidence 1122334778999998654 668899999999999999999 999986532 22344444333
Q ss_pred ccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHHhh
Q 005226 650 FEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERI 705 (707)
Q Consensus 650 ~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~~L~~i 705 (707)
.+...+ ......+.+++.+||+.||++||||.+|++.|+.+
T Consensus 436 ~~~~~~---------------~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~ 476 (495)
T 1opk_A 436 YRMERP---------------EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 476 (495)
T ss_dssp CCCCCC---------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred CCCCCC---------------CCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHH
Confidence 322211 12234578999999999999999999999999886
No 41
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=2.7e-41 Score=349.24 Aligned_cols=250 Identities=23% Similarity=0.389 Sum_probs=201.0
Q ss_pred cceecccCeeEEEEEEeCCCceEEEEEcCCCchhhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCcceEEEEeecCCChH
Q 005226 412 AYVLGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLA 491 (707)
Q Consensus 412 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL~ 491 (707)
.+.||+|+||+||++...++..||+|++....... +++.+|++++++++||||+++++++.+++..++||||+++|+|.
T Consensus 29 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~-~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 107 (283)
T 3gen_A 29 LKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLL 107 (283)
T ss_dssp EEECC---CEEEEEEEETTTEEEEEEEECTTSBCH-HHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCCTTCBHH
T ss_pred HhhcCCCCCceEEEEEEcCCCeEEEEEecCCCCCH-HHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEeccCCCcHH
Confidence 35899999999999999888899999998765443 67999999999999999999999999999999999999999999
Q ss_pred HHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEecccccccccccCCCCCCC
Q 005226 492 NALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSS 571 (707)
Q Consensus 492 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~ 571 (707)
+++.... ..+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+++.........
T Consensus 108 ~~l~~~~----~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~--- 177 (283)
T 3gen_A 108 NYLREMR----HRFQTQQLLEMCKDVCEAMEYLES---KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTS--- 177 (283)
T ss_dssp HHHHCGG----GCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHHS---
T ss_pred HHHHHhc----cCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCCccceEEEcCCCCEEEcccccccccccccccc---
Confidence 9998632 359999999999999999999999 899999999999999999999999999998664321110
Q ss_pred CCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCCCccchhHHHHHHhhc
Q 005226 572 GGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTSIEVPDLVRWVKKGF 650 (707)
Q Consensus 572 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~ 650 (707)
.....+|+.|+|||.+.. ..++.++||||||+++|||+| |+.||.... .......+....
T Consensus 178 ------------~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~------~~~~~~~~~~~~ 238 (283)
T 3gen_A 178 ------------SVGSKFPVRWSPPEVLMY-SKFSSKSDIWAFGVLMWEIYSLGKMPYERFT------NSETAEHIAQGL 238 (283)
T ss_dssp ------------TTSTTSCGGGCCHHHHHH-CCCSHHHHHHHHHHHHHHHHTTTCCTTTTSC------HHHHHHHHHTTC
T ss_pred ------------ccCCccCcccCCHHHhcc-CCCCchhhHHHHHHHHHHHHhCCCCCccccC------hhHHHHHHhccc
Confidence 012335778999998664 568899999999999999999 999986532 122333333222
Q ss_pred cccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHHhhc
Q 005226 651 EEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERIG 706 (707)
Q Consensus 651 ~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~~L~~i~ 706 (707)
....+ ......+.+++.+||+.||++|||++++++.|+++.
T Consensus 239 ~~~~~---------------~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~ 279 (283)
T 3gen_A 239 RLYRP---------------HLASEKVYTIMYSCWHEKADERPTFKILLSNILDVM 279 (283)
T ss_dssp CCCCC---------------TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCCC---------------CcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHh
Confidence 21111 111245789999999999999999999999998863
No 42
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=6.8e-41 Score=369.28 Aligned_cols=245 Identities=27% Similarity=0.449 Sum_probs=200.4
Q ss_pred cceecccCeeEEEEEEeCCCceEEEEEcCCCchhhHHHHHHHHHHHHhcCCCceeeeEEEEEcCC-cceEEEEeecCCCh
Q 005226 412 AYVLGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPD-EKLLISDFISNGNL 490 (707)
Q Consensus 412 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~~lV~e~~~~gsL 490 (707)
.+.||+|+||.||+|... +..||||+++... ..+.|.+|++++++++||||+++++++...+ ..++||||+++|+|
T Consensus 198 ~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~~~~g~L 274 (450)
T 1k9a_A 198 LQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSL 274 (450)
T ss_dssp EEEEEECSSEEEEEEEET-TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEECCTTCBH
T ss_pred EeeecCcCCeeEEEEEec-CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEecCCCcH
Confidence 458999999999999984 7799999997654 3478999999999999999999999987765 68999999999999
Q ss_pred HHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEecccccccccccCCCCCC
Q 005226 491 ANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSS 570 (707)
Q Consensus 491 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~~ 570 (707)
.++++... ...+++..++.++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++......
T Consensus 275 ~~~l~~~~---~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~----- 343 (450)
T 1k9a_A 275 VDYLRSRG---RSVLGGDCLLKFSLDVCEAMEYLEG---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ----- 343 (450)
T ss_dssp HHHHHHHC---TTTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTSCEEECCCTTCEECC--------
T ss_pred HHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCCHhhEEECCCCCEEEeeCCCcccccccc-----
Confidence 99998653 2347999999999999999999999 899999999999999999999999999998543211
Q ss_pred CCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCCCccchhHHHHHHhh
Q 005226 571 SGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTSIEVPDLVRWVKKG 649 (707)
Q Consensus 571 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~ 649 (707)
....++..|+|||++.. ..++.++|||||||++|||+| |+.||...... +....+...
T Consensus 344 --------------~~~~~~~~y~aPE~~~~-~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~------~~~~~i~~~ 402 (450)
T 1k9a_A 344 --------------DTGKLPVKWTAPEALRE-KKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK------DVVPRVEKG 402 (450)
T ss_dssp -----------------CCCTTTSCHHHHHS-SCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTT------THHHHHHTT
T ss_pred --------------cCCCCCcceeCHHHhcC-CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH------HHHHHHHcC
Confidence 11234778999999765 678999999999999999999 99999754322 333334333
Q ss_pred ccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHHhhc
Q 005226 650 FEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERIG 706 (707)
Q Consensus 650 ~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~~L~~i~ 706 (707)
.+...+ ......+.+++.+||+.||++|||+.++++.|+.|.
T Consensus 403 ~~~~~p---------------~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~ 444 (450)
T 1k9a_A 403 YKMDAP---------------DGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIR 444 (450)
T ss_dssp CCCCCC---------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCCCC---------------CcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence 322211 122346789999999999999999999999999874
No 43
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=1.2e-40 Score=348.75 Aligned_cols=255 Identities=27% Similarity=0.402 Sum_probs=195.8
Q ss_pred cceecccCeeEEEEEEeCCCceEEEEEcCCC--chhhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCcceEEEEeecCCC
Q 005226 412 AYVLGKSGLGIVYKVVLGNGIPVAVRRLGEG--GEQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGN 489 (707)
Q Consensus 412 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gs 489 (707)
.+.||+|+||.||+|...+ .+|+|.++.. .....+.|.+|++++++++||||+++++++. .+..++||||+++|+
T Consensus 41 ~~~lG~G~~g~Vy~~~~~~--~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv~e~~~~~~ 117 (307)
T 3lb7_A 41 STRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVTQWCEGSS 117 (307)
T ss_dssp EEEEEECSSCEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEECCSSCB
T ss_pred EeEecCCCCeEEEEEEECC--EEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-cCcEEEEEecCCCCc
Confidence 4589999999999998643 5888887654 3344578999999999999999999999864 566899999999999
Q ss_pred hHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEecccccccccccCCCCC
Q 005226 490 LANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPS 569 (707)
Q Consensus 490 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~ 569 (707)
|.+++.... ..+++.++..|+.||+.||+|||+ .+|+||||||+||+++.++.+||+|||+++.........
T Consensus 118 L~~~l~~~~----~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~~~~~- 189 (307)
T 3lb7_A 118 LYKHLHVQE----TKFQMFQLIDIARQTAQGMDYLHA---KNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQ- 189 (307)
T ss_dssp HHHHHHTSC----CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCSSSEEECTTSCEEECCCCSSCC---------
T ss_pred HHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHh---CCEeeCCCChhhEEEcCCCCEEEccCCCceecccccccc-
Confidence 999997543 369999999999999999999999 899999999999999999999999999997654211110
Q ss_pred CCCCCcCCCCCCCCccccccCccccCCCCCC--CCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchhHHHHHH
Q 005226 570 SSGGFMGGALPYMKPVQTEKTNNYRAPEARV--PGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVRWVK 647 (707)
Q Consensus 570 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~ 647 (707)
......||+.|+|||++. .+..++.++||||||+++|||++|+.||...... ..+...+.
T Consensus 190 -------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~-----~~~~~~~~ 251 (307)
T 3lb7_A 190 -------------QVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNR-----DQIIFMVG 251 (307)
T ss_dssp -----------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCH-----HHHHHHHH
T ss_pred -------------cccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcH-----HHHHHHHh
Confidence 012345799999999864 2456788999999999999999999999753321 12222222
Q ss_pred hhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHHhhc
Q 005226 648 KGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERIG 706 (707)
Q Consensus 648 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~~L~~i~ 706 (707)
........ ... .......+.+++.+||+.||++||++.+|++.|+.+.
T Consensus 252 ~~~~~~~~-~~~----------~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~ 299 (307)
T 3lb7_A 252 RGYASPDL-SKL----------YKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQ 299 (307)
T ss_dssp HTCCCCCS-TTS----------CSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHH
T ss_pred cCCCCcch-hhh----------hcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHHH
Confidence 22211110 111 0122346789999999999999999999999998874
No 44
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=3.3e-41 Score=362.00 Aligned_cols=256 Identities=29% Similarity=0.403 Sum_probs=203.3
Q ss_pred cceecccCeeEEEEEEeC------CCceEEEEEcCCC-chhhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCcceEEEEe
Q 005226 412 AYVLGKSGLGIVYKVVLG------NGIPVAVRRLGEG-GEQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDF 484 (707)
Q Consensus 412 ~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~ 484 (707)
.+.||+|+||.||+|.+. ++..||||++... ......++.+|+.++++++||||+++++++...+..++||||
T Consensus 76 ~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~ 155 (367)
T 3l9p_A 76 IRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLEL 155 (367)
T ss_dssp EEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred eeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCEEEEEe
Confidence 347999999999999853 4678999999765 334456789999999999999999999999999999999999
Q ss_pred ecCCChHHHHhCCCC--CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCC---CeEEecccccc
Q 005226 485 ISNGNLANALRGRNG--QPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDF---QPYISDFGLSR 559 (707)
Q Consensus 485 ~~~gsL~~~l~~~~~--~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~---~~kl~DfGla~ 559 (707)
+++|+|.+++..... .....+++..++.|+.||+.||+|||+ ++|+||||||+|||++.++ .+||+|||+++
T Consensus 156 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~~~~~~~kL~DFG~a~ 232 (367)
T 3l9p_A 156 MAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 232 (367)
T ss_dssp CTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESCSSTTCCEEECCCHHHH
T ss_pred CCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChhhEEEecCCCCceEEECCCcccc
Confidence 999999999976432 123469999999999999999999999 8999999999999999554 59999999998
Q ss_pred cccccCCCCCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCCCcc
Q 005226 560 LINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTSIE 638 (707)
Q Consensus 560 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~ellt-g~~P~~~~~~~~~~~ 638 (707)
.......... .....+|+.|+|||++.. ..++.++|||||||++|||+| |+.||....
T Consensus 233 ~~~~~~~~~~--------------~~~~~~t~~y~aPE~~~~-~~~~~~~DvwslG~il~ellt~g~~pf~~~~------ 291 (367)
T 3l9p_A 233 DIYRAGYYRK--------------GGCAMLPVKWMPPEAFME-GIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS------ 291 (367)
T ss_dssp HHHHHSSCTT--------------CCGGGSCGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC------
T ss_pred cccccccccc--------------CCCcCCcccEECHHHhcC-CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCC------
Confidence 6643322111 123456889999998664 678999999999999999998 999986532
Q ss_pred chhHHHHHHhhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHHhhc
Q 005226 639 VPDLVRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERIG 706 (707)
Q Consensus 639 ~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~~L~~i~ 706 (707)
...+.+.+........+ ......+.+++.+||+.||++||++.+|++.|+.+.
T Consensus 292 ~~~~~~~i~~~~~~~~~---------------~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~ 344 (367)
T 3l9p_A 292 NQEVLEFVTSGGRMDPP---------------KNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCT 344 (367)
T ss_dssp HHHHHHHHHTTCCCCCC---------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCCCC---------------ccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHh
Confidence 22333333332221111 122345789999999999999999999999998763
No 45
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=6.5e-41 Score=354.03 Aligned_cols=250 Identities=25% Similarity=0.431 Sum_probs=194.3
Q ss_pred ceecccCeeEEEEEEeC-CCc----eEEEEEcCCCc-hhhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCcceEEEEeec
Q 005226 413 YVLGKSGLGIVYKVVLG-NGI----PVAVRRLGEGG-EQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFIS 486 (707)
Q Consensus 413 ~~lG~G~~g~Vy~~~~~-~~~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~ 486 (707)
+.||+|+||+||+|... ++. .||+|.+.... ....++|.+|+.++++++||||++++++|.++ ..++|+||++
T Consensus 21 ~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-~~~~v~e~~~ 99 (327)
T 3poz_A 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQLITQLMP 99 (327)
T ss_dssp EEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESS-SEEEEEECCT
T ss_pred eEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecC-CeEEEEEecC
Confidence 48999999999999954 443 36888886542 33457899999999999999999999999875 4789999999
Q ss_pred CCChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEecccccccccccCC
Q 005226 487 NGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGN 566 (707)
Q Consensus 487 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~~ 566 (707)
+|+|.+++.... ..+++..++.|+.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++.......
T Consensus 100 ~g~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~LH~---~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 172 (327)
T 3poz_A 100 FGCLLDYVREHK----DNIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK 172 (327)
T ss_dssp TCBHHHHHHHST----TSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEEETTEEEECCTTHHHHHTTTCC
T ss_pred CCcHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHhh---CCeeCCCCChheEEECCCCCEEEccCcceeEccCCcc
Confidence 999999998653 359999999999999999999999 8999999999999999999999999999987653322
Q ss_pred CCCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCCCccchhHHHH
Q 005226 567 NPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTSIEVPDLVRW 645 (707)
Q Consensus 567 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~ 645 (707)
... .....+|..|+|||++.. ..++.++|||||||++|||+| |+.||..... ..+...
T Consensus 173 ~~~--------------~~~~~~t~~y~aPE~~~~-~~~~~~~Di~slG~il~ellt~g~~p~~~~~~------~~~~~~ 231 (327)
T 3poz_A 173 EYH--------------AEGGKVPIKWMALESILH-RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA------SEISSI 231 (327)
T ss_dssp ---------------------CCCGGGSCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCG------GGHHHH
T ss_pred ccc--------------ccCCCccccccChHHhcc-CCCCchhhhhhhHHHHHHHHhcCCCCccCCCH------HHHHHH
Confidence 111 022345789999999765 678999999999999999999 9999975322 233333
Q ss_pred HHhhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHHhhc
Q 005226 646 VKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERIG 706 (707)
Q Consensus 646 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~~L~~i~ 706 (707)
+........+ ......+.+++.+||+.||++||+++++++.|+.+.
T Consensus 232 ~~~~~~~~~~---------------~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~ 277 (327)
T 3poz_A 232 LEKGERLPQP---------------PICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMA 277 (327)
T ss_dssp HHTTCCCCCC---------------TTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHH
T ss_pred HHcCCCCCCC---------------ccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHH
Confidence 3332221111 122345788999999999999999999999998763
No 46
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=4.2e-41 Score=344.51 Aligned_cols=250 Identities=26% Similarity=0.423 Sum_probs=203.7
Q ss_pred cceecccCeeEEEEEEeCCCceEEEEEcCCCchhhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCcceEEEEeecCCChH
Q 005226 412 AYVLGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLA 491 (707)
Q Consensus 412 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL~ 491 (707)
.+.||+|+||.||+|...++..||+|++....... +.+.+|++++++++||||+++++++.+++..++||||+++|+|.
T Consensus 13 ~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~~~-~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 91 (267)
T 3t9t_A 13 VQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE-EDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLS 91 (267)
T ss_dssp EEEEEEETTEEEEEEEETTTEEEEEEEECTTTBCH-HHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCCTTCBHH
T ss_pred eeEecCCCceeEEEEEecCCCeEEEEEccccCCCH-HHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCCCCCcHH
Confidence 35799999999999999888999999998764443 67899999999999999999999999999999999999999999
Q ss_pred HHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEecccccccccccCCCCCCC
Q 005226 492 NALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSS 571 (707)
Q Consensus 492 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~ 571 (707)
+++.... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++.........
T Consensus 92 ~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~--- 161 (267)
T 3t9t_A 92 DYLRTQR----GLFAAETLLGMCLDVCEGMAYLEE---ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTS--- 161 (267)
T ss_dssp HHHHHTT----TCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHHS---
T ss_pred HHHhhCc----ccCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCchheEEECCCCCEEEcccccccccccccccc---
Confidence 9998653 358999999999999999999999 899999999999999999999999999998654221100
Q ss_pred CCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCCCccchhHHHHHHhhc
Q 005226 572 GGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTSIEVPDLVRWVKKGF 650 (707)
Q Consensus 572 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~ 650 (707)
.....++..|+|||++.. ..++.++||||||+++|||++ |+.||.... .......+....
T Consensus 162 ------------~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~~g~~p~~~~~------~~~~~~~i~~~~ 222 (267)
T 3t9t_A 162 ------------STGTKFPVKWASPEVFSF-SRYSSKSDVWSFGVLMWEVFSEGKIPYENRS------NSEVVEDISTGF 222 (267)
T ss_dssp ------------TTSTTCCGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC------HHHHHHHHHTTC
T ss_pred ------------cccccccccccChhhhcC-CCccchhchhhhHHHHHHHhccCCCCCCCCC------HHHHHHHHhcCC
Confidence 012345778999998654 667899999999999999999 899986432 222333333322
Q ss_pred cccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHHhhc
Q 005226 651 EEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERIG 706 (707)
Q Consensus 651 ~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~~L~~i~ 706 (707)
....+ ......+.+++.+||+.||++||+++++++.|+++.
T Consensus 223 ~~~~~---------------~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~ 263 (267)
T 3t9t_A 223 RLYKP---------------RLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIA 263 (267)
T ss_dssp CCCCC---------------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred cCCCC---------------ccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 21111 112245778999999999999999999999999874
No 47
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=9.5e-41 Score=355.11 Aligned_cols=256 Identities=28% Similarity=0.410 Sum_probs=203.4
Q ss_pred cceecccCeeEEEEEEeC------CCceEEEEEcCCCc-hhhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCcceEEEEe
Q 005226 412 AYVLGKSGLGIVYKVVLG------NGIPVAVRRLGEGG-EQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDF 484 (707)
Q Consensus 412 ~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~ 484 (707)
.+.||+|+||.||+|... ++..||||+++... ....+.|.+|++++++++||||+++++++.+++..++||||
T Consensus 52 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 131 (343)
T 1luf_A 52 VRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEY 131 (343)
T ss_dssp EEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred eeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCCceEEEEec
Confidence 357999999999999974 35889999998653 33457899999999999999999999999999999999999
Q ss_pred ecCCChHHHHhCCCCC-------------------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEc
Q 005226 485 ISNGNLANALRGRNGQ-------------------PSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLD 545 (707)
Q Consensus 485 ~~~gsL~~~l~~~~~~-------------------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~ 545 (707)
+++|+|.+++...... ....+++.+++.|+.||+.||+|||+ ++|+||||||+||+++
T Consensus 132 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~---~~ivH~Dlkp~NIl~~ 208 (343)
T 1luf_A 132 MAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSE---RKFVHRDLATRNCLVG 208 (343)
T ss_dssp CTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEC
T ss_pred CCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCcceEEEC
Confidence 9999999999764311 11469999999999999999999999 8999999999999999
Q ss_pred CCCCeEEecccccccccccCCCCCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHh-C
Q 005226 546 NDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT-G 624 (707)
Q Consensus 546 ~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~ellt-g 624 (707)
.++.+||+|||+++.......... .....+|..|+|||++.. ..++.++||||||+++|||+| |
T Consensus 209 ~~~~~kl~Dfg~~~~~~~~~~~~~--------------~~~~~~t~~y~aPE~~~~-~~~~~~~Di~slG~il~el~t~g 273 (343)
T 1luf_A 209 ENMVVKIADFGLSRNIYSADYYKA--------------DGNDAIPIRWMPPESIFY-NRYTTESDVWAYGVVLWEIFSYG 273 (343)
T ss_dssp GGGCEEECCCSCHHHHTGGGCBC------------------CCBCGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTT
T ss_pred CCCeEEEeecCCCcccccCccccc--------------cCCCcccceecChhhhcc-CCcCcccccHHHHHHHHHHHhcC
Confidence 999999999999987643221110 122346889999998664 568899999999999999999 9
Q ss_pred CCCCCCCCCCCCccchhHHHHHHhhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHHh
Q 005226 625 KSPELSPTTSTSIEVPDLVRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLER 704 (707)
Q Consensus 625 ~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~~L~~ 704 (707)
+.||.... ...+...+........ .......+.+++.+||+.||++||++.+|++.|++
T Consensus 274 ~~p~~~~~------~~~~~~~~~~~~~~~~---------------~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~ 332 (343)
T 1luf_A 274 LQPYYGMA------HEEVIYYVRDGNILAC---------------PENCPLELYNLMRLCWSKLPADRPSFCSIHRILQR 332 (343)
T ss_dssp CCTTTTSC------HHHHHHHHHTTCCCCC---------------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred CCcCCCCC------hHHHHHHHhCCCcCCC---------------CCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHH
Confidence 99986432 1223332222211110 01223457899999999999999999999999998
Q ss_pred hc
Q 005226 705 IG 706 (707)
Q Consensus 705 i~ 706 (707)
+.
T Consensus 333 ~~ 334 (343)
T 1luf_A 333 MC 334 (343)
T ss_dssp TT
T ss_pred HH
Confidence 74
No 48
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=5.5e-41 Score=359.32 Aligned_cols=257 Identities=27% Similarity=0.425 Sum_probs=201.5
Q ss_pred cceecccCeeEEEEEEe------CCCceEEEEEcCCCc-hhhHHHHHHHHHHHHhc-CCCceeeeEEEEEcCCc-ceEEE
Q 005226 412 AYVLGKSGLGIVYKVVL------GNGIPVAVRRLGEGG-EQRHREFVTEVQAIAKV-KHPNIVKLRAYYWAPDE-KLLIS 482 (707)
Q Consensus 412 ~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~-~~lV~ 482 (707)
.+.||+|+||.||+|.+ .+++.||||+++... ....+.+.+|+++++++ +||||+++++++.+.+. .++||
T Consensus 27 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~~iv~ 106 (359)
T 3vhe_A 27 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIV 106 (359)
T ss_dssp EEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTSCCEEEE
T ss_pred ceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecCCCceEEEE
Confidence 45899999999999973 356889999997653 33457799999999999 89999999999988655 89999
Q ss_pred EeecCCChHHHHhCCCCCC-------------------------------------------------------------
Q 005226 483 DFISNGNLANALRGRNGQP------------------------------------------------------------- 501 (707)
Q Consensus 483 e~~~~gsL~~~l~~~~~~~------------------------------------------------------------- 501 (707)
||+++|+|.++++......
T Consensus 107 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (359)
T 3vhe_A 107 EFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLY 186 (359)
T ss_dssp ECCTTEEHHHHHHTTTTSBCSCC------------------------------------------------------CTT
T ss_pred EecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchhhhcccccchh
Confidence 9999999999998754210
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEecccccccccccCCCCCCCCCCcCCCCCC
Q 005226 502 STSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPY 581 (707)
Q Consensus 502 ~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~ 581 (707)
...+++..++.|+.||+.||+|||+ ++|+||||||+||+++.++.+||+|||+++........
T Consensus 187 ~~~l~~~~~~~~~~ql~~aL~~LH~---~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~-------------- 249 (359)
T 3vhe_A 187 KDFLTLEHLICYSFQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY-------------- 249 (359)
T ss_dssp TTCBCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTC--------------
T ss_pred ccccCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChhhEEEcCCCcEEEEeccceeeecccccc--------------
Confidence 1228999999999999999999999 89999999999999999999999999999865422211
Q ss_pred CCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCCCccchhHHHHHHhhccccCCCchhc
Q 005226 582 MKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTSIEVPDLVRWVKKGFEEENPLSDMV 660 (707)
Q Consensus 582 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 660 (707)
.......||..|+|||++.. ..++.++||||||+++|||+| |+.||...... ..+...+........+
T Consensus 250 ~~~~~~~~t~~y~aPE~~~~-~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~----- 318 (359)
T 3vhe_A 250 VRKGDARLPLKWMAPETIFD-RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID-----EEFCRRLKEGTRMRAP----- 318 (359)
T ss_dssp EEC--CEECGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCS-----HHHHHHHHHTCCCCCC-----
T ss_pred hhccccCCCceeEChhhhcC-CCCCchhhhhhHHHHHHHHHhcCCCCCCccchh-----HHHHHHHHcCCCCCCC-----
Confidence 01123456889999998664 678899999999999999999 99999654322 1222222222111111
Q ss_pred hHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHHhhc
Q 005226 661 DAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERIG 706 (707)
Q Consensus 661 d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~~L~~i~ 706 (707)
......+.+++.+||+.||.+|||+++|++.|+++.
T Consensus 319 ----------~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~ 354 (359)
T 3vhe_A 319 ----------DYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 354 (359)
T ss_dssp ----------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ----------CCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHH
Confidence 112245788999999999999999999999999863
No 49
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=4.5e-41 Score=370.92 Aligned_cols=249 Identities=27% Similarity=0.454 Sum_probs=198.2
Q ss_pred cceecccCeeEEEEEEeCCCceEEEEEcCCCchhhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCcceEEEEeecCCChH
Q 005226 412 AYVLGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLA 491 (707)
Q Consensus 412 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL~ 491 (707)
.+.||+|+||.||+|.+.++..||||+++..... .++|.+|++++++++||||+++++++.+ +..++||||+++|+|.
T Consensus 189 ~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~~~~gsL~ 266 (452)
T 1fmk_A 189 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS-PEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLL 266 (452)
T ss_dssp EEEEEECSSCEEEEEEETTTEEEEEEECCTTSSC-HHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCTTCBHH
T ss_pred eeeecCCCCeEEEEEEECCCceEEEEEeccCCCC-HHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehhhcCCCHH
Confidence 4589999999999999988888999999865433 3789999999999999999999999866 7789999999999999
Q ss_pred HHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEecccccccccccCCCCCCC
Q 005226 492 NALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSS 571 (707)
Q Consensus 492 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~ 571 (707)
++++... ...+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++.........
T Consensus 267 ~~l~~~~---~~~~~~~~~~~i~~qi~~~l~~LH~---~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~--- 337 (452)
T 1fmk_A 267 DFLKGET---GKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA--- 337 (452)
T ss_dssp HHHSHHH---HTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCCCTTC------------
T ss_pred HHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChhhEEECCCCCEEECCCccceecCCCceec---
Confidence 9997532 1258999999999999999999999 899999999999999999999999999998664221110
Q ss_pred CCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCCCccchhHHHHHHhhc
Q 005226 572 GGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTSIEVPDLVRWVKKGF 650 (707)
Q Consensus 572 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~ 650 (707)
.....++..|+|||.+.. ..++.++|||||||++|||+| |+.||.... ..+....+....
T Consensus 338 ------------~~~~~~~~~y~aPE~~~~-~~~~~~sDvwslG~~l~el~t~g~~P~~~~~------~~~~~~~i~~~~ 398 (452)
T 1fmk_A 338 ------------RQGAKFPIKWTAPEAALY-GRFTIKSDVWSFGILLTELTTKGRVPYPGMV------NREVLDQVERGY 398 (452)
T ss_dssp -----------------CCGGGSCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTTCCSSTTCC------HHHHHHHHHTTC
T ss_pred ------------ccCCcccccccCHhHHhc-CCCCccccHHhHHHHHHHHHhCCCCCCCCCC------HHHHHHHHHcCC
Confidence 122345788999998664 678999999999999999999 999986432 223333333332
Q ss_pred cccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHHhh
Q 005226 651 EEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERI 705 (707)
Q Consensus 651 ~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~~L~~i 705 (707)
+...+ ......+.+++.+||+.||++|||+++|++.|+.+
T Consensus 399 ~~~~~---------------~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~ 438 (452)
T 1fmk_A 399 RMPCP---------------PECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY 438 (452)
T ss_dssp CCCCC---------------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTT
T ss_pred CCCCC---------------CCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 22111 12234678999999999999999999999999986
No 50
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=1.1e-40 Score=344.55 Aligned_cols=249 Identities=25% Similarity=0.382 Sum_probs=189.8
Q ss_pred cceecccCeeEEEEEEeCC----CceEEEEEcCCCc-hhhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCcceEEEEeec
Q 005226 412 AYVLGKSGLGIVYKVVLGN----GIPVAVRRLGEGG-EQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFIS 486 (707)
Q Consensus 412 ~~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~ 486 (707)
.+.||+|+||.||+|.... +..||+|++.... ....+.|.+|+.++++++||||+++++++ .++..++||||++
T Consensus 20 ~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e~~~ 98 (281)
T 1mp8_A 20 GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCT 98 (281)
T ss_dssp EEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEE-CSSSCEEEEECCT
T ss_pred EeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEE-ccCccEEEEecCC
Confidence 4589999999999998642 4579999987643 33457899999999999999999999998 4567899999999
Q ss_pred CCChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEecccccccccccCC
Q 005226 487 NGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGN 566 (707)
Q Consensus 487 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~~ 566 (707)
+|+|.+++.... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++.......
T Consensus 99 ~~~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 171 (281)
T 1mp8_A 99 LGELRSFLQVRK----YSLDLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTY 171 (281)
T ss_dssp TEEHHHHHHHTT----TTSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECC------------
T ss_pred CCCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHh---CCeecccccHHHEEECCCCCEEECccccccccCcccc
Confidence 999999998643 358999999999999999999999 8999999999999999999999999999987643221
Q ss_pred CCCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCCCccchhHHHH
Q 005226 567 NPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTSIEVPDLVRW 645 (707)
Q Consensus 567 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~ 645 (707)
.. .....+++.|+|||++.. ..++.++||||||+++|||++ |+.||..... .+....
T Consensus 172 ~~---------------~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~------~~~~~~ 229 (281)
T 1mp8_A 172 YK---------------ASKGKLPIKWMAPESINF-RRFTSASDVWMFGVCMWEILMHGVKPFQGVKN------NDVIGR 229 (281)
T ss_dssp ----------------------CCGGGCCHHHHHH-CCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCG------GGHHHH
T ss_pred cc---------------cccCCCcccccChhhccc-CCCCCccCchHHHHHHHHHHhcCCCCCCcCCH------HHHHHH
Confidence 11 122345778999998654 678899999999999999997 9999875322 233333
Q ss_pred HHhhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHHhh
Q 005226 646 VKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERI 705 (707)
Q Consensus 646 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~~L~~i 705 (707)
+........ . ......+.+++.+||+.||++||++.++++.|+++
T Consensus 230 i~~~~~~~~--~-------------~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~ 274 (281)
T 1mp8_A 230 IENGERLPM--P-------------PNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 274 (281)
T ss_dssp HHTTCCCCC--C-------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHcCCCCCC--C-------------CCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 332211110 0 12234577999999999999999999999999987
No 51
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=9.4e-41 Score=352.04 Aligned_cols=247 Identities=25% Similarity=0.304 Sum_probs=195.2
Q ss_pred ceecccCeeEEEEEEeC-CCceEEEEEcCCCch-hhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCcceEEEEeecCCCh
Q 005226 413 YVLGKSGLGIVYKVVLG-NGIPVAVRRLGEGGE-QRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNL 490 (707)
Q Consensus 413 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL 490 (707)
+.||+|+||+||+|... +++.||||++..... ...+.+.+|+.++++++||||+++++++.+++..++||||+++|+|
T Consensus 13 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~~~~L 92 (323)
T 3tki_A 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL 92 (323)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCTTEEG
T ss_pred eEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEEcCCCCcH
Confidence 47999999999999975 789999999865432 2336788999999999999999999999999999999999999999
Q ss_pred HHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEecccccccccccCCCCCC
Q 005226 491 ANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSS 570 (707)
Q Consensus 491 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~~ 570 (707)
.+++.... .+++..+..++.||+.||+|||+ .+|+||||||+||+++.++.+||+|||+++..........
T Consensus 93 ~~~l~~~~-----~~~~~~~~~i~~qi~~aL~~LH~---~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~- 163 (323)
T 3tki_A 93 FDRIEPDI-----GMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL- 163 (323)
T ss_dssp GGGSBTTT-----BCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECC-
T ss_pred HHHHhhcC-----CCCHHHHHHHHHHHHHHHHHHHH---CCccccccchHHEEEeCCCCEEEEEeeccceeccCCcccc-
Confidence 99997543 59999999999999999999999 8999999999999999999999999999986542221110
Q ss_pred CCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchhHHHHHHhhc
Q 005226 571 SGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVRWVKKGF 650 (707)
Q Consensus 571 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~ 650 (707)
.....||+.|+|||++......+.++|||||||++|||++|+.||...... ......|.....
T Consensus 164 -------------~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~----~~~~~~~~~~~~ 226 (323)
T 3tki_A 164 -------------LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDS----CQEYSDWKEKKT 226 (323)
T ss_dssp -------------BCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTT----SHHHHHHHTTCT
T ss_pred -------------cCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchH----HHHHHHHhcccc
Confidence 023457999999999766445578999999999999999999999754332 122233322211
Q ss_pred cccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 005226 651 EEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSE 700 (707)
Q Consensus 651 ~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~ 700 (707)
... . .......+.+++.+||+.||++|||+.|+++
T Consensus 227 ~~~-~--------------~~~~~~~~~~li~~~L~~dP~~R~t~~eil~ 261 (323)
T 3tki_A 227 YLN-P--------------WKKIDSAPLALLHKILVENPSARITIPDIKK 261 (323)
T ss_dssp TST-T--------------GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred cCC-c--------------cccCCHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 100 0 0122345678999999999999999999875
No 52
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=1e-40 Score=350.20 Aligned_cols=255 Identities=29% Similarity=0.436 Sum_probs=203.9
Q ss_pred cceecccCeeEEEEEEe------CCCceEEEEEcCCCc-hhhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCcceEEEEe
Q 005226 412 AYVLGKSGLGIVYKVVL------GNGIPVAVRRLGEGG-EQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDF 484 (707)
Q Consensus 412 ~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~ 484 (707)
.+.||+|+||.||+|.. .++..||||++.... ....+.+.+|++++++++||||+++++++.+++..++||||
T Consensus 28 ~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 107 (314)
T 2ivs_A 28 GKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEY 107 (314)
T ss_dssp EEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred eeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCceEEEEee
Confidence 45899999999999985 345889999997653 34457899999999999999999999999999999999999
Q ss_pred ecCCChHHHHhCCCCC-------------------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEc
Q 005226 485 ISNGNLANALRGRNGQ-------------------PSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLD 545 (707)
Q Consensus 485 ~~~gsL~~~l~~~~~~-------------------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~ 545 (707)
+++|+|.+++...... ....+++..+++++.||+.||+|||+ ++|+||||||+||+++
T Consensus 108 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dikp~NIli~ 184 (314)
T 2ivs_A 108 AKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAE---MKLVHRDLAARNILVA 184 (314)
T ss_dssp CTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEE
T ss_pred cCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHH---CCCcccccchheEEEc
Confidence 9999999999865421 12348999999999999999999999 8999999999999999
Q ss_pred CCCCeEEecccccccccccCCCCCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHh-C
Q 005226 546 NDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT-G 624 (707)
Q Consensus 546 ~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~ellt-g 624 (707)
.++.+||+|||+++......... ......+++.|+|||.+.. ..++.++||||||+++|||+| |
T Consensus 185 ~~~~~kl~Dfg~~~~~~~~~~~~--------------~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~el~t~g 249 (314)
T 2ivs_A 185 EGRKMKISDFGLSRDVYEEDSYV--------------KRSQGRIPVKWMAIESLFD-HIYTTQSDVWSFGVLLWEIVTLG 249 (314)
T ss_dssp TTTEEEECCCTTCEECTTTSCEE--------------CSSCCCSCGGGCCHHHHHH-CEECHHHHHHHHHHHHHHHHTTS
T ss_pred CCCCEEEccccccccccccccce--------------eccCCCCcccccChhhhcC-CCcCchhhHHHHHHHHHHHHhCC
Confidence 99999999999998664322111 1122345788999998654 667899999999999999999 9
Q ss_pred CCCCCCCCCCCCccchhHHHHHHhhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHHh
Q 005226 625 KSPELSPTTSTSIEVPDLVRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLER 704 (707)
Q Consensus 625 ~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~~L~~ 704 (707)
+.||..... ..+...+........+ ......+.+++.+||+.||++||++.++++.|++
T Consensus 250 ~~p~~~~~~------~~~~~~~~~~~~~~~~---------------~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~ 308 (314)
T 2ivs_A 250 GNPYPGIPP------ERLFNLLKTGHRMERP---------------DNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEK 308 (314)
T ss_dssp CCSSTTCCG------GGHHHHHHTTCCCCCC---------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred CCCCCCCCH------HHHHHHhhcCCcCCCC---------------ccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 999865332 2333333332211111 1223457899999999999999999999999998
Q ss_pred h
Q 005226 705 I 705 (707)
Q Consensus 705 i 705 (707)
+
T Consensus 309 ~ 309 (314)
T 2ivs_A 309 M 309 (314)
T ss_dssp H
T ss_pred H
Confidence 6
No 53
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=6.8e-40 Score=343.64 Aligned_cols=258 Identities=24% Similarity=0.311 Sum_probs=196.1
Q ss_pred ceecccCeeEEEEEEeCCCceEEEEEcCCCch--hhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCcceEEEEeecCCCh
Q 005226 413 YVLGKSGLGIVYKVVLGNGIPVAVRRLGEGGE--QRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNL 490 (707)
Q Consensus 413 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL 490 (707)
+.||+|+||+||+|...+++.||+|++..... .....+.+|++++++++||||+++++++.+++..++||||++ |+|
T Consensus 27 ~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~-~~l 105 (311)
T 3niz_A 27 EKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEFME-KDL 105 (311)
T ss_dssp EEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEECCS-EEH
T ss_pred hhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEcCCC-CCH
Confidence 37999999999999998899999999875432 234678899999999999999999999999999999999997 589
Q ss_pred HHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEecccccccccccCCCCCC
Q 005226 491 ANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSS 570 (707)
Q Consensus 491 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~~ 570 (707)
.+++.... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++.........
T Consensus 106 ~~~~~~~~----~~~~~~~~~~~~~qi~~~l~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~-- 176 (311)
T 3niz_A 106 KKVLDENK----TGLQDSQIKIYLYQLLRGVAHCHQ---HRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSY-- 176 (311)
T ss_dssp HHHHHTCT----TCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEETTSCCC----
T ss_pred HHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCchHhEEECCCCCEEEccCcCceecCCCcccc--
Confidence 98887643 358999999999999999999999 899999999999999999999999999998664221111
Q ss_pred CCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchhHHHHHHhhc
Q 005226 571 SGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVRWVKKGF 650 (707)
Q Consensus 571 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~ 650 (707)
....+|+.|+|||++.....++.++|||||||++|||++|+.||...... +....+....
T Consensus 177 --------------~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~------~~~~~i~~~~ 236 (311)
T 3niz_A 177 --------------THEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDD------DQLPKIFSIL 236 (311)
T ss_dssp ---------------CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTT------THHHHHHHHH
T ss_pred --------------cCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChH------HHHHHHHHHH
Confidence 22356899999999776567899999999999999999999999764432 1111121111
Q ss_pred cccCC--CchhchHHHHh------------hhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 005226 651 EEENP--LSDMVDAMLLQ------------EVHAKKEVIAVFHLALACTEADPEVRPRMKNVSE 700 (707)
Q Consensus 651 ~~~~~--~~~~~d~~l~~------------~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~ 700 (707)
....+ .....+..... .........++.+++.+|++.||++|||++|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 300 (311)
T 3niz_A 237 GTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN 300 (311)
T ss_dssp CCCCTTTSGGGTTSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred CCCChHHhhhhhccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 11100 00000000000 0000112346789999999999999999999986
No 54
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=4.4e-40 Score=342.24 Aligned_cols=252 Identities=26% Similarity=0.361 Sum_probs=196.8
Q ss_pred ceecccCeeEEEEEEeC-CCceEEEEEcCCC---chhhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCcceEEEEeecCC
Q 005226 413 YVLGKSGLGIVYKVVLG-NGIPVAVRRLGEG---GEQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNG 488 (707)
Q Consensus 413 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~g 488 (707)
+.||+|+||.||+|... ++..||+|++... .....+.|.+|+.++++++||||+++++++.+++..++||||+++|
T Consensus 17 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~g~ 96 (294)
T 4eqm_A 17 DKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGP 96 (294)
T ss_dssp EEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEEEECCCSC
T ss_pred EEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEEEeCCCCC
Confidence 47999999999999964 6889999988543 2334578999999999999999999999999999999999999999
Q ss_pred ChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEecccccccccccCCCC
Q 005226 489 NLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNP 568 (707)
Q Consensus 489 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~ 568 (707)
+|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++.........
T Consensus 97 ~L~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 168 (294)
T 4eqm_A 97 TLSEYIESHG-----PLSVDTAINFTNQILDGIKHAHD---MRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQ 168 (294)
T ss_dssp BHHHHHHHHC-----SCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCSSSTTC-------
T ss_pred CHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEEeCCCccccccccccc
Confidence 9999997643 58999999999999999999999 899999999999999999999999999998654321111
Q ss_pred CCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchhHHHHHHh
Q 005226 569 SSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVRWVKK 648 (707)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~ 648 (707)
.....||+.|+|||.+.. ..++.++||||||+++|||+||+.||..... ......
T Consensus 169 ---------------~~~~~gt~~y~aPE~~~~-~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~---------~~~~~~ 223 (294)
T 4eqm_A 169 ---------------TNHVLGTVQYFSPEQAKG-EATDECTDIYSIGIVLYEMLVGEPPFNGETA---------VSIAIK 223 (294)
T ss_dssp ---------------------CCSSCCHHHHHT-CCCCTTHHHHHHHHHHHHHHHSSCSSCSSCH---------HHHHHH
T ss_pred ---------------cCccccCccccCHhHhcC-CCCCchHhHHHHHHHHHHHHhCCCCCCCCCh---------HHHHHH
Confidence 123457999999998765 6778999999999999999999999965321 111111
Q ss_pred hccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCC-ChHHHHHHHHhh
Q 005226 649 GFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRP-RMKNVSENLERI 705 (707)
Q Consensus 649 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-s~~~v~~~L~~i 705 (707)
......+ .. ... ........+.+++.+|++.||++|| +++++.+.|+.+
T Consensus 224 ~~~~~~~--~~-~~~-----~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~ 273 (294)
T 4eqm_A 224 HIQDSVP--NV-TTD-----VRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSV 273 (294)
T ss_dssp HHSSCCC--CH-HHH-----SCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTS
T ss_pred HhhccCC--Cc-chh-----cccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHH
Confidence 1111111 00 000 0112335678999999999999999 999999999875
No 55
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=2.7e-40 Score=346.81 Aligned_cols=256 Identities=26% Similarity=0.420 Sum_probs=203.6
Q ss_pred cceecccCeeEEEEEEe------CCCceEEEEEcCCCch-hhHHHHHHHHHHHHhc-CCCceeeeEEEEEcCCcceEEEE
Q 005226 412 AYVLGKSGLGIVYKVVL------GNGIPVAVRRLGEGGE-QRHREFVTEVQAIAKV-KHPNIVKLRAYYWAPDEKLLISD 483 (707)
Q Consensus 412 ~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lV~e 483 (707)
.+.||+|+||.||+|.. .++..||||++..... ...+.+.+|+++++++ +||||+++++++..++..++|||
T Consensus 28 ~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e 107 (313)
T 1t46_A 28 GKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITE 107 (313)
T ss_dssp EEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred HHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCCcEEEEe
Confidence 45899999999999984 3578899999976533 3457899999999999 99999999999999999999999
Q ss_pred eecCCChHHHHhCCCCC-------------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCe
Q 005226 484 FISNGNLANALRGRNGQ-------------PSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQP 550 (707)
Q Consensus 484 ~~~~gsL~~~l~~~~~~-------------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~ 550 (707)
|+++|+|.+++...... ....+++..+++++.||+.||+|||+ ++|+||||||+||+++.++.+
T Consensus 108 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~ 184 (313)
T 1t46_A 108 YCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLAS---KNCIHRDLAARNILLTHGRIT 184 (313)
T ss_dssp CCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEETTTEE
T ss_pred cCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCccceEEEcCCCCE
Confidence 99999999999865421 12358999999999999999999999 899999999999999999999
Q ss_pred EEecccccccccccCCCCCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCC
Q 005226 551 YISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPEL 629 (707)
Q Consensus 551 kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~ellt-g~~P~~ 629 (707)
||+|||+++......... ......+|..|+|||.+.. ..++.++||||||+++|||+| |+.||.
T Consensus 185 kl~Dfg~~~~~~~~~~~~--------------~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~ellt~g~~p~~ 249 (313)
T 1t46_A 185 KICDFGLARDIKNDSNYV--------------VKGNARLPVKWMAPESIFN-CVYTFESDVWSYGIFLWELFSLGSSPYP 249 (313)
T ss_dssp EECCCGGGSCTTSCTTSE--------------ECSSSEECGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTTCCSST
T ss_pred EEccccccccccccccce--------------eccCCCCcceeeChHHhcC-CCCChHHHHHHHHHHHHHHHhCCCCCCC
Confidence 999999998665322110 0122345788999998654 678899999999999999999 999986
Q ss_pred CCCCCCCccchhHHHHHHhhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHHhh
Q 005226 630 SPTTSTSIEVPDLVRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERI 705 (707)
Q Consensus 630 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~~L~~i 705 (707)
..... ..+...+........+ ......+.+++.+||+.||.+||++.++++.|+++
T Consensus 250 ~~~~~-----~~~~~~~~~~~~~~~~---------------~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~ 305 (313)
T 1t46_A 250 GMPVD-----SKFYKMIKEGFRMLSP---------------EHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQ 305 (313)
T ss_dssp TCCSS-----HHHHHHHHHTCCCCCC---------------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred cccch-----hHHHHHhccCCCCCCc---------------ccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHH
Confidence 54321 1222222222211110 12234578999999999999999999999999876
No 56
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=8.2e-40 Score=346.19 Aligned_cols=241 Identities=25% Similarity=0.298 Sum_probs=194.8
Q ss_pred ceecccCeeEEEEEEeC-CCceEEEEEcCCCc---hhhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCcceEEEEeecCC
Q 005226 413 YVLGKSGLGIVYKVVLG-NGIPVAVRRLGEGG---EQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNG 488 (707)
Q Consensus 413 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~g 488 (707)
+.||+|+||.||+|... +|+.||+|++++.. ......+.+|++++++++||||+++++++.+.+..++||||+++|
T Consensus 11 ~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~E~~~gg 90 (337)
T 1o6l_A 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG 90 (337)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEEECCTTC
T ss_pred EEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEEeCCCCC
Confidence 48999999999999975 68999999987542 233467889999999999999999999999999999999999999
Q ss_pred ChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEecccccccccccCCCC
Q 005226 489 NLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNP 568 (707)
Q Consensus 489 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~ 568 (707)
+|.+++.... .+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++........
T Consensus 91 ~L~~~l~~~~-----~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~- 161 (337)
T 1o6l_A 91 ELFFHLSRER-----VFTEERARFYGAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT- 161 (337)
T ss_dssp BHHHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTCC-
T ss_pred cHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHH---CCeecCcCCHHHEEECCCCCEEEeeccchhhcccCCCc-
Confidence 9999997543 58999999999999999999999 89999999999999999999999999999754321110
Q ss_pred CCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchhHHHHHHh
Q 005226 569 SSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVRWVKK 648 (707)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~ 648 (707)
.....||+.|+|||++.. ..++.++|||||||++|||++|+.||.... ...+.+.+..
T Consensus 162 ---------------~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~ell~g~~Pf~~~~------~~~~~~~i~~ 219 (337)
T 1o6l_A 162 ---------------MKTFCGTPEYLAPEVLED-NDYGRAVDWWGLGVVMYEMMCGRLPFYNQD------HERLFELILM 219 (337)
T ss_dssp ---------------BCCCEECGGGCCGGGGSS-SCBCTTHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHH
T ss_pred ---------------ccccccChhhCChhhhcC-CCCCchhhcccchhHHHHHhcCCCCCCCCC------HHHHHHHHHc
Confidence 123467999999999765 678999999999999999999999996432 1122222111
Q ss_pred hccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCC-----ChHHHHH
Q 005226 649 GFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRP-----RMKNVSE 700 (707)
Q Consensus 649 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~~v~~ 700 (707)
....+. ......+.+++.+||+.||++|| ++++|++
T Consensus 220 ---~~~~~p-------------~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~ 260 (337)
T 1o6l_A 220 ---EEIRFP-------------RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME 260 (337)
T ss_dssp ---CCCCCC-------------TTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred ---CCCCCC-------------CCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHc
Confidence 111111 11234578999999999999999 8888864
No 57
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=6.7e-40 Score=350.10 Aligned_cols=245 Identities=25% Similarity=0.297 Sum_probs=196.3
Q ss_pred cceecccCeeEEEEEEeC-CCceEEEEEcCCCchh------hHHHHHHHHHHHHhcCCCceeeeEEEEEcCCcceEEEEe
Q 005226 412 AYVLGKSGLGIVYKVVLG-NGIPVAVRRLGEGGEQ------RHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDF 484 (707)
Q Consensus 412 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~ 484 (707)
.+.||+|+||.||+|... +|..||+|.+...... ..+.+.+|+.++++++||||+++++++.+.+..++||||
T Consensus 17 ~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~e~ 96 (361)
T 2yab_A 17 GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDVVLILEL 96 (361)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred eeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEEEEEEEc
Confidence 348999999999999975 6899999998754321 246789999999999999999999999999999999999
Q ss_pred ecCCChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCC----CeEEeccccccc
Q 005226 485 ISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDF----QPYISDFGLSRL 560 (707)
Q Consensus 485 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~----~~kl~DfGla~~ 560 (707)
+++|+|.+++.... .+++..+..++.||+.||+|||+ .+|+||||||+||+++.++ .+||+|||+++.
T Consensus 97 ~~gg~L~~~l~~~~-----~l~~~~~~~i~~qi~~aL~~LH~---~givHrDlkp~NIll~~~~~~~~~vkl~DFG~a~~ 168 (361)
T 2yab_A 97 VSGGELFDFLAQKE-----SLSEEEATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHE 168 (361)
T ss_dssp CCSCBHHHHHTTCS-----CCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESCTTSSSCCEEECCCSSCEE
T ss_pred CCCCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEeCCCCCccCEEEEecCCceE
Confidence 99999999997543 69999999999999999999999 8999999999999998877 799999999987
Q ss_pred ccccCCCCCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccch
Q 005226 561 INITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVP 640 (707)
Q Consensus 561 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~ 640 (707)
....... ....||+.|+|||++.. ..++.++|||||||++|||++|+.||..... .
T Consensus 169 ~~~~~~~-----------------~~~~gt~~y~aPE~~~~-~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~------~ 224 (361)
T 2yab_A 169 IEDGVEF-----------------KNIFGTPEFVAPEIVNY-EPLGLEADMWSIGVITYILLSGASPFLGDTK------Q 224 (361)
T ss_dssp CCTTCCC-----------------CCCCSCGGGCCHHHHTT-CCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH------H
T ss_pred cCCCCcc-----------------ccCCCCccEECchHHcC-CCCCccccHHHHHHHHHHHHhCCCCCCCCCH------H
Confidence 6532111 22457999999999664 6789999999999999999999999965321 1
Q ss_pred hHHHHHHhhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 005226 641 DLVRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSE 700 (707)
Q Consensus 641 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~ 700 (707)
.....+... ... ++... .......+.+++.+|+..||++|||+.|+++
T Consensus 225 ~~~~~i~~~---~~~----~~~~~-----~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 272 (361)
T 2yab_A 225 ETLANITAV---SYD----FDEEF-----FSQTSELAKDFIRKLLVKETRKRLTIQEALR 272 (361)
T ss_dssp HHHHHHHTT---CCC----CCHHH-----HTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred HHHHHHHhc---CCC----CCchh-----ccCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 222222111 110 01111 0122345789999999999999999999874
No 58
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=3.6e-40 Score=353.75 Aligned_cols=264 Identities=21% Similarity=0.282 Sum_probs=198.9
Q ss_pred ceecccCeeEEEEEEeCC------CceEEEEEcCCCchhh-----------HHHHHHHHHHHHhcCCCceeeeEEEEEcC
Q 005226 413 YVLGKSGLGIVYKVVLGN------GIPVAVRRLGEGGEQR-----------HREFVTEVQAIAKVKHPNIVKLRAYYWAP 475 (707)
Q Consensus 413 ~~lG~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~~-----------~~~~~~E~~~l~~l~H~niv~l~~~~~~~ 475 (707)
+.||+|+||.||+|...+ ++.||||++....... ...+.+|+..++.++||||+++++++...
T Consensus 41 ~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~ 120 (364)
T 3op5_A 41 LPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYWGSGLHD 120 (364)
T ss_dssp EECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCEEEEEEEE
T ss_pred EEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeEEeeeeec
Confidence 479999999999998754 4789999987653211 12344566677788899999999999775
Q ss_pred ----CcceEEEEeecCCChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEc--CCCC
Q 005226 476 ----DEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLD--NDFQ 549 (707)
Q Consensus 476 ----~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~--~~~~ 549 (707)
...++||||+ +|+|.+++.... ..+++..++.|+.||+.||+|||+ .+|+||||||+|||++ .++.
T Consensus 121 ~~~~~~~~lv~e~~-g~~L~~~~~~~~----~~l~~~~~~~i~~qi~~~l~~lH~---~~iiHrDlkp~Nill~~~~~~~ 192 (364)
T 3op5_A 121 KNGKSYRFMIMDRF-GSDLQKIYEANA----KRFSRKTVLQLSLRILDILEYIHE---HEYVHGDIKASNLLLNYKNPDQ 192 (364)
T ss_dssp ETTEEEEEEEEECE-EEEHHHHHHHTT----SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEEESSCTTC
T ss_pred cCCcceEEEEEeCC-CCCHHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHH---CCeEEecCCHHHEEEecCCCCe
Confidence 3479999999 999999998643 359999999999999999999999 8999999999999999 8899
Q ss_pred eEEecccccccccccCCCCCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCC
Q 005226 550 PYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPEL 629 (707)
Q Consensus 550 ~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~ 629 (707)
+||+|||+++.+.......... ........||+.|+|||++.. ..++.++|||||||++|||+||+.||.
T Consensus 193 ~kl~DFG~a~~~~~~~~~~~~~---------~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di~slG~~l~el~~g~~Pf~ 262 (364)
T 3op5_A 193 VYLVDYGLAYRYCPEGVHKAYA---------ADPKRCHDGTIEFTSIDAHNG-VAPSRRGDLEILGYCMIQWLTGHLPWE 262 (364)
T ss_dssp EEECCCTTCEESSGGGCCCCSS---------CCSSCCCCCCTTTCCHHHHTT-CCCCHHHHHHHHHHHHHHHHHSCCTTG
T ss_pred EEEEECCcceecccCCcccccc---------cCcccccCCCCCccCHHHhCC-CCCCchhhHHHHHHHHHHHHhCCCCcc
Confidence 9999999998765433221110 001123458999999999765 668999999999999999999999997
Q ss_pred CCCCCCCccchhHHHHHHhhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHHhh
Q 005226 630 SPTTSTSIEVPDLVRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERI 705 (707)
Q Consensus 630 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~~L~~i 705 (707)
..... .....+....+... +.+++++.+.. .....++.+++..||+.||++||++.+|++.|+++
T Consensus 263 ~~~~~-----~~~~~~~~~~~~~~--~~~~~~~~~~~----~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~ 327 (364)
T 3op5_A 263 DNLKD-----PKYVRDSKIRYREN--IASLMDKCFPA----ANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQG 327 (364)
T ss_dssp GGTTC-----HHHHHHHHHHHHHC--HHHHHHHHSCT----TCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHH
T ss_pred ccccC-----HHHHHHHHHHhhhh--HHHHHHHhccc----ccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHH
Confidence 53221 22333333222211 12333332211 12245688999999999999999999999999875
No 59
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.9e-40 Score=356.35 Aligned_cols=253 Identities=25% Similarity=0.408 Sum_probs=189.9
Q ss_pred cceecccCeeEEEEEEeC--C--CceEEEEEcCCC-chhhHHHHHHHHHHHHhcCCCceeeeEEEEEc-CCcceEEEEee
Q 005226 412 AYVLGKSGLGIVYKVVLG--N--GIPVAVRRLGEG-GEQRHREFVTEVQAIAKVKHPNIVKLRAYYWA-PDEKLLISDFI 485 (707)
Q Consensus 412 ~~~lG~G~~g~Vy~~~~~--~--~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~-~~~~~lV~e~~ 485 (707)
.+.||+|+||+||+|... + +..||||.++.. .....++|.+|+.++++++||||++++++|.. ++..++||||+
T Consensus 94 ~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv~e~~ 173 (373)
T 3c1x_A 94 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM 173 (373)
T ss_dssp EEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEEEECC
T ss_pred CcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEEEECC
Confidence 348999999999999863 2 246899998764 33455789999999999999999999999865 45779999999
Q ss_pred cCCChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEecccccccccccC
Q 005226 486 SNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITG 565 (707)
Q Consensus 486 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~ 565 (707)
++|+|.+++.... ..+++..+..++.||+.||+|||+ ++|+||||||+||+++.++.+||+|||+++......
T Consensus 174 ~~g~L~~~l~~~~----~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~ 246 (373)
T 3c1x_A 174 KHGDLRNFIRNET----HNPTVKDLIGFGLQVAKGMKFLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 246 (373)
T ss_dssp TTCBHHHHHHCTT----CCCBHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCC----------
T ss_pred CCCCHHHHHhhcc----cCCCHHHHHHHHHHHHHHHHHHHH---CCEecCccchheEEECCCCCEEEeeccccccccccc
Confidence 9999999998643 358999999999999999999999 899999999999999999999999999998664322
Q ss_pred CCCCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCCCccchhHHH
Q 005226 566 NNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTSIEVPDLVR 644 (707)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~ellt-g~~P~~~~~~~~~~~~~~~~~ 644 (707)
.... .......+|+.|+|||++.. ..++.++|||||||++|||+| |.+||...... +...
T Consensus 247 ~~~~------------~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~------~~~~ 307 (373)
T 3c1x_A 247 FDSV------------HNKTGAKLPVKWMALESLQT-QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF------DITV 307 (373)
T ss_dssp -----------------------CCGGGSCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSS------CHHH
T ss_pred cccc------------cccCCCCCcccccChHHhcC-CCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHH------HHHH
Confidence 1110 00122345788999998664 678899999999999999999 56676543221 2333
Q ss_pred HHHhhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHHhh
Q 005226 645 WVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERI 705 (707)
Q Consensus 645 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~~L~~i 705 (707)
.+........+ ......+.+++.+||+.||++||+++++++.|+++
T Consensus 308 ~~~~~~~~~~p---------------~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i 353 (373)
T 3c1x_A 308 YLLQGRRLLQP---------------EYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 353 (373)
T ss_dssp HHHTTCCCCCC---------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHcCCCCCCC---------------CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 33322211111 11234578999999999999999999999999886
No 60
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=3.1e-40 Score=349.98 Aligned_cols=255 Identities=29% Similarity=0.461 Sum_probs=201.9
Q ss_pred cceecccCeeEEEEEEeC--------CCceEEEEEcCCCc-hhhHHHHHHHHHHHHhc-CCCceeeeEEEEEcCCcceEE
Q 005226 412 AYVLGKSGLGIVYKVVLG--------NGIPVAVRRLGEGG-EQRHREFVTEVQAIAKV-KHPNIVKLRAYYWAPDEKLLI 481 (707)
Q Consensus 412 ~~~lG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lV 481 (707)
.+.||+|+||.||+|... ++..||||++.... ....+.+.+|+++++++ +||||+++++++..++..++|
T Consensus 40 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 119 (334)
T 2pvf_A 40 GKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVI 119 (334)
T ss_dssp EEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCCEEE
T ss_pred eeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccCCceEEE
Confidence 458999999999999863 56789999997653 34457899999999999 999999999999999999999
Q ss_pred EEeecCCChHHHHhCCCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCe
Q 005226 482 SDFISNGNLANALRGRNGQ-----------PSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQP 550 (707)
Q Consensus 482 ~e~~~~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~ 550 (707)
|||+++|+|.+++...... ....+++..++.++.||+.||+|||+ .+|+||||||+||+++.++.+
T Consensus 120 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~ 196 (334)
T 2pvf_A 120 VEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAARNVLVTENNVM 196 (334)
T ss_dssp EECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCE
T ss_pred EECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCccceEEEcCCCCE
Confidence 9999999999999865421 12358999999999999999999999 899999999999999999999
Q ss_pred EEecccccccccccCCCCCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCC
Q 005226 551 YISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPEL 629 (707)
Q Consensus 551 kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~ellt-g~~P~~ 629 (707)
||+|||+++......... ......+++.|+|||++.. ..++.++||||||+++|||++ |+.||.
T Consensus 197 kL~Dfg~~~~~~~~~~~~--------------~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~ellt~g~~p~~ 261 (334)
T 2pvf_A 197 KIADFGLARDINNIDYYK--------------KTTNGRLPVKWMAPEALFD-RVYTHQSDVWSFGVLMWEIFTLGGSPYP 261 (334)
T ss_dssp EECCCTTCEECTTTSSEE--------------CCSCCCCCGGGCCHHHHHH-CEECHHHHHHHHHHHHHHHHTTSCCSST
T ss_pred EEcccccccccccccccc--------------ccCCCCcccceeChHHhcC-CCcChHHHHHHHHHHHHHHHhCCCCCcC
Confidence 999999998664322110 0122345788999998654 567899999999999999999 999986
Q ss_pred CCCCCCCccchhHHHHHHhhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHHhh
Q 005226 630 SPTTSTSIEVPDLVRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERI 705 (707)
Q Consensus 630 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~~L~~i 705 (707)
... ...+...+........+ ......+.+++.+||+.||.+||++.++++.|+++
T Consensus 262 ~~~------~~~~~~~~~~~~~~~~~---------------~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l 316 (334)
T 2pvf_A 262 GIP------VEELFKLLKEGHRMDKP---------------ANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316 (334)
T ss_dssp TCC------HHHHHHHHHHTCCCCCC---------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred cCC------HHHHHHHHhcCCCCCCC---------------ccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 432 22333333332211111 11234578899999999999999999999999887
No 61
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.8e-40 Score=351.79 Aligned_cols=258 Identities=25% Similarity=0.383 Sum_probs=202.4
Q ss_pred ccceecccCeeEEEEEEe------CCCceEEEEEcCCCc-hhhHHHHHHHHHHHHhc-CCCceeeeEEEEEcCCcceEEE
Q 005226 411 SAYVLGKSGLGIVYKVVL------GNGIPVAVRRLGEGG-EQRHREFVTEVQAIAKV-KHPNIVKLRAYYWAPDEKLLIS 482 (707)
Q Consensus 411 ~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lV~ 482 (707)
..+.||+|+||.||+|.. .++..||||++.... ....+.+.+|+.+++++ +||||+++++++...+..++||
T Consensus 49 ~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~ 128 (344)
T 1rjb_A 49 FGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIF 128 (344)
T ss_dssp EEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred eeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCCccEEEE
Confidence 345899999999999995 356789999987542 33447899999999999 9999999999999999999999
Q ss_pred EeecCCChHHHHhCCCCC------------------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEE
Q 005226 483 DFISNGNLANALRGRNGQ------------------PSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILL 544 (707)
Q Consensus 483 e~~~~gsL~~~l~~~~~~------------------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll 544 (707)
||+++|+|.+++...... ....+++..++.++.||+.||+|||+ ++|+||||||+||++
T Consensus 129 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIll 205 (344)
T 1rjb_A 129 EYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEF---KSCVHRDLAARNVLV 205 (344)
T ss_dssp ECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHH---TTEEETTCSGGGEEE
T ss_pred ecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCChhhEEE
Confidence 999999999999865421 01348999999999999999999999 899999999999999
Q ss_pred cCCCCeEEecccccccccccCCCCCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHh-
Q 005226 545 DNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT- 623 (707)
Q Consensus 545 ~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~ellt- 623 (707)
+.++.+||+|||+++......... ......+|+.|+|||.+.. ..++.++||||||+++|||+|
T Consensus 206 ~~~~~~kL~Dfg~~~~~~~~~~~~--------------~~~~~~~t~~y~aPE~~~~-~~~~~~~Di~slG~il~el~t~ 270 (344)
T 1rjb_A 206 THGKVVKICDFGLARDIMSDSNYV--------------VRGNARLPVKWMAPESLFE-GIYTIKSDVWSYGILLWEIFSL 270 (344)
T ss_dssp ETTTEEEECCCGGGSCGGGCTTSE--------------EETTEEECGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHTTT
T ss_pred cCCCcEEeCCCccCcccccCccce--------------eccCccCccCccCHHHhcc-CCCChhHhHHHHHHHHHHHHcC
Confidence 999999999999998665322110 1123446788999998654 678899999999999999998
Q ss_pred CCCCCCCCCCCCCccchhHHHHHHhhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHH
Q 005226 624 GKSPELSPTTSTSIEVPDLVRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLE 703 (707)
Q Consensus 624 g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~~L~ 703 (707)
|+.||...... ..+...+........+ ......+.+++.+||+.||.+||++.++++.|+
T Consensus 271 g~~p~~~~~~~-----~~~~~~~~~~~~~~~~---------------~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~ 330 (344)
T 1rjb_A 271 GVNPYPGIPVD-----ANFYKLIQNGFKMDQP---------------FYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLG 330 (344)
T ss_dssp SCCSSTTCCCS-----HHHHHHHHTTCCCCCC---------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCCcccCCcH-----HHHHHHHhcCCCCCCC---------------CCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHH
Confidence 99999754322 2233333332222111 112345788999999999999999999999998
Q ss_pred hhc
Q 005226 704 RIG 706 (707)
Q Consensus 704 ~i~ 706 (707)
.+.
T Consensus 331 ~~~ 333 (344)
T 1rjb_A 331 CQL 333 (344)
T ss_dssp HHC
T ss_pred HHH
Confidence 763
No 62
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=5.7e-40 Score=343.60 Aligned_cols=249 Identities=27% Similarity=0.444 Sum_probs=192.1
Q ss_pred cceecccCeeEEEEEEeCCCceEEEEEcCCCchhhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCcceEEEEeecCCChH
Q 005226 412 AYVLGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLA 491 (707)
Q Consensus 412 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL~ 491 (707)
.+.||+|+||.||+|.. .++.||||++.... ..+.|.+|++++++++||||+++++++. +..++||||+++|+|.
T Consensus 13 ~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~lv~e~~~~~~L~ 87 (307)
T 2eva_A 13 EEVVGRGAFGVVCKAKW-RAKDVAIKQIESES--ERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYAEGGSLY 87 (307)
T ss_dssp EEEEECCSSSEEEEEEE-TTEEEEEEECSSTT--HHHHHHHHHHHHHHCCCTTBCCEEEBCT--TTTEEEEECCTTCBHH
T ss_pred eeEeecCCCceEEEEEE-CCeeEEEEEecChh--HHHHHHHHHHHHhcCCCCCcCeEEEEEc--CCcEEEEEcCCCCCHH
Confidence 34899999999999998 47889999997543 3478999999999999999999999876 4589999999999999
Q ss_pred HHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCC-eEEecccccccccccCCCCCC
Q 005226 492 NALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQ-PYISDFGLSRLINITGNNPSS 570 (707)
Q Consensus 492 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~-~kl~DfGla~~~~~~~~~~~~ 570 (707)
+++.... ....+++..++.++.|+++||+|||+.+.++|+||||||+||+++.++. +||+|||+++......
T Consensus 88 ~~l~~~~--~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~~----- 160 (307)
T 2eva_A 88 NVLHGAE--PLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHM----- 160 (307)
T ss_dssp HHHHCSS--SEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC-------------
T ss_pred HHHhccC--CCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEccccccccccccc-----
Confidence 9998653 2235789999999999999999999965568999999999999998886 7999999997543211
Q ss_pred CCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchhHHHHHHhhc
Q 005226 571 SGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVRWVKKGF 650 (707)
Q Consensus 571 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~ 650 (707)
....||..|+|||++.. ..++.++||||||+++|||+||+.||...... ............
T Consensus 161 --------------~~~~gt~~y~aPE~~~~-~~~~~~~Di~slG~il~el~~g~~p~~~~~~~----~~~~~~~~~~~~ 221 (307)
T 2eva_A 161 --------------TNNKGSAAWMAPEVFEG-SNYSEKCDVFSWGIILWEVITRRKPFDEIGGP----AFRIMWAVHNGT 221 (307)
T ss_dssp ------------------CCTTSSCHHHHTC-CCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSS----HHHHHHHHHTTC
T ss_pred --------------ccCCCCCceEChhhhCC-CCCCcHHHHHHHHHHHHHHHHCCCCchhhCcc----HHHHHHHHhcCC
Confidence 12346899999999764 67899999999999999999999999753221 111111111111
Q ss_pred cccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHHhhc
Q 005226 651 EEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERIG 706 (707)
Q Consensus 651 ~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~~L~~i~ 706 (707)
.. ... ......+.+++.+||+.||++|||+.++++.|+.+.
T Consensus 222 ~~--~~~-------------~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~ 262 (307)
T 2eva_A 222 RP--PLI-------------KNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLM 262 (307)
T ss_dssp CC--CCB-------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHG
T ss_pred CC--Ccc-------------cccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHH
Confidence 11 000 112245778999999999999999999999998874
No 63
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=2.5e-40 Score=348.88 Aligned_cols=255 Identities=27% Similarity=0.432 Sum_probs=189.2
Q ss_pred cceecccCeeEEEEEEeCCC----ceEEEEEcCCC--chhhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCcc------e
Q 005226 412 AYVLGKSGLGIVYKVVLGNG----IPVAVRRLGEG--GEQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEK------L 479 (707)
Q Consensus 412 ~~~lG~G~~g~Vy~~~~~~~----~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~------~ 479 (707)
.+.||+|+||.||+|..... ..||||++... .....+.|.+|++++++++||||+++++++...+.. +
T Consensus 28 ~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~ 107 (323)
T 3qup_A 28 GRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPM 107 (323)
T ss_dssp EEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC-------CEE
T ss_pred eceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccccCCCccE
Confidence 34899999999999996533 27999998765 334457899999999999999999999999887665 9
Q ss_pred EEEEeecCCChHHHHhCCCC-CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEeccccc
Q 005226 480 LISDFISNGNLANALRGRNG-QPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLS 558 (707)
Q Consensus 480 lV~e~~~~gsL~~~l~~~~~-~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla 558 (707)
+||||+++|+|.+++..... .....+++..+..|+.||+.||+|||+ .+|+||||||+||+++.++.+||+|||++
T Consensus 108 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~---~~ivH~Dikp~NIli~~~~~~kl~Dfg~a 184 (323)
T 3qup_A 108 VILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSS---RNFIHRDLAARNCMLAEDMTVCVADFGLS 184 (323)
T ss_dssp EEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTSCEEECCCCC-
T ss_pred EEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHc---CCcccCCCCcceEEEcCCCCEEEeecccc
Confidence 99999999999999964321 122358999999999999999999999 89999999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCCCc
Q 005226 559 RLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTSI 637 (707)
Q Consensus 559 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~ellt-g~~P~~~~~~~~~~ 637 (707)
+.......... .....+++.|+|||.+.. ..++.++|||||||++|||++ |+.||.....
T Consensus 185 ~~~~~~~~~~~--------------~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~ell~~g~~p~~~~~~---- 245 (323)
T 3qup_A 185 RKIYSGDYYRQ--------------GCASKLPVKWLALESLAD-NLYTVHSDVWAFGVTMWEIMTRGQTPYAGIEN---- 245 (323)
T ss_dssp ------------------------------CCGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCG----
T ss_pred ccccccccccc--------------cccccCcccccCchhhcC-CCCCCccchhhHHHHHHHHHhCCCCCccccCh----
Confidence 86643221111 122345778999998654 678899999999999999999 8999875322
Q ss_pred cchhHHHHHHhhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHHhh
Q 005226 638 EVPDLVRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERI 705 (707)
Q Consensus 638 ~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~~L~~i 705 (707)
......+........+ ......+.+++.+||+.||++|||+.++++.|+++
T Consensus 246 --~~~~~~~~~~~~~~~~---------------~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~ 296 (323)
T 3qup_A 246 --AEIYNYLIGGNRLKQP---------------PECMEEVYDLMYQCWSADPKQRPSFTCLRMELENI 296 (323)
T ss_dssp --GGHHHHHHTTCCCCCC---------------TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred --HHHHHHHhcCCCCCCC---------------CccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 2233322222111111 12234578999999999999999999999999986
No 64
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=9.5e-40 Score=338.38 Aligned_cols=246 Identities=26% Similarity=0.450 Sum_probs=194.1
Q ss_pred ceecccCeeEEEEEEe-CCCceEEEEEcCCCchh-------hHHHHHHHHHHHHhcCCCceeeeEEEEEcCCcceEEEEe
Q 005226 413 YVLGKSGLGIVYKVVL-GNGIPVAVRRLGEGGEQ-------RHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDF 484 (707)
Q Consensus 413 ~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-------~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~ 484 (707)
+.||+|+||.||+|.. .+++.||+|++...... ..+.+.+|++++++++||||+++++++.+.. ++||||
T Consensus 25 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~lv~e~ 102 (287)
T 4f0f_A 25 KQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP--RMVMEF 102 (287)
T ss_dssp EECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT--EEEEEC
T ss_pred hccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC--eEEEEe
Confidence 4799999999999997 47899999998654321 1167899999999999999999999986544 799999
Q ss_pred ecCCChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCC--ceecCCCCCCeEEcCCCC-----eEEecccc
Q 005226 485 ISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRK--FVHGDIKPSNILLDNDFQ-----PYISDFGL 557 (707)
Q Consensus 485 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~--iiHrDlk~~NIll~~~~~-----~kl~DfGl 557 (707)
+++|+|.+++.... ..+++..+..++.|++.||+|||+ .+ |+||||||+||+++.++. +||+|||+
T Consensus 103 ~~~~~L~~~l~~~~----~~~~~~~~~~~~~~l~~~l~~lH~---~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg~ 175 (287)
T 4f0f_A 103 VPCGDLYHRLLDKA----HPIKWSVKLRLMLDIALGIEYMQN---QNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGL 175 (287)
T ss_dssp CTTCBHHHHHHCTT----SCCCHHHHHHHHHHHHHHHHHHHT---SSSCCBCSCCSGGGEEESCCCTTCSCCEEECCCTT
T ss_pred cCCCCHHHHHhccc----CCccHHHHHHHHHHHHHHHHHHHh---CCCCeecCCCCcceEEEeccCCCCceeEEeCCCCc
Confidence 99999999997643 369999999999999999999999 67 999999999999988776 99999999
Q ss_pred cccccccCCCCCCCCCCcCCCCCCCCccccccCccccCCCCCCC-CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCC
Q 005226 558 SRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVP-GNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTS 636 (707)
Q Consensus 558 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~ 636 (707)
++..... .....||+.|+|||++.. ...++.++||||||+++|||++|+.||......
T Consensus 176 ~~~~~~~-------------------~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~-- 234 (287)
T 4f0f_A 176 SQQSVHS-------------------VSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYG-- 234 (287)
T ss_dssp CBCCSSC-------------------EECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCC--
T ss_pred ccccccc-------------------ccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCcccccc--
Confidence 8743311 123456899999998742 355688999999999999999999999754322
Q ss_pred ccchhHHHHHHh-hccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHHhh
Q 005226 637 IEVPDLVRWVKK-GFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERI 705 (707)
Q Consensus 637 ~~~~~~~~~~~~-~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~~L~~i 705 (707)
.......... ...... .......+.+++.+||+.||++||+++++++.|+++
T Consensus 235 --~~~~~~~~~~~~~~~~~---------------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 235 --KIKFINMIREEGLRPTI---------------PEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp --HHHHHHHHHHSCCCCCC---------------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred --HHHHHHHHhccCCCCCC---------------CcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence 1111222111 111110 112234578999999999999999999999999875
No 65
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=1.9e-40 Score=350.11 Aligned_cols=250 Identities=24% Similarity=0.380 Sum_probs=195.8
Q ss_pred ceecccCeeEEEEEEeC-CCce----EEEEEcCCCc-hhhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCcceEEEEeec
Q 005226 413 YVLGKSGLGIVYKVVLG-NGIP----VAVRRLGEGG-EQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFIS 486 (707)
Q Consensus 413 ~~lG~G~~g~Vy~~~~~-~~~~----vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~ 486 (707)
+.||+|+||.||+|... ++.. ||+|.+.... ......+.+|+.++++++||||+++++++. ++..++||||++
T Consensus 19 ~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~ 97 (325)
T 3kex_A 19 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQLVTQYLP 97 (325)
T ss_dssp EEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEEEEECCT
T ss_pred eeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEEEEEeCC
Confidence 47999999999999964 4444 7888775442 233356788999999999999999999885 567899999999
Q ss_pred CCChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEecccccccccccCC
Q 005226 487 NGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGN 566 (707)
Q Consensus 487 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~~ 566 (707)
+|+|.+++.... ..+++..+..|+.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++.......
T Consensus 98 ~~~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~ 170 (325)
T 3kex_A 98 LGSLLDHVRQHR----GALGPQLLLNWGVQIAKGMYYLEE---HGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDK 170 (325)
T ss_dssp TCBSHHHHHSSG----GGSCTTHHHHHHHHHHHHHHHHHH---TTCCCSCCSSTTEEESSSSCEEECSCSGGGGSCCCTT
T ss_pred CCCHHHHHHHcc----ccCCHHHHHHHHHHHHHHHHHHHh---CCCCCCccchheEEECCCCeEEECCCCcccccCcccc
Confidence 999999998653 358899999999999999999999 8999999999999999999999999999987653322
Q ss_pred CCCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCCCccchhHHHH
Q 005226 567 NPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTSIEVPDLVRW 645 (707)
Q Consensus 567 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~ 645 (707)
... .....++..|+|||++.. ..++.++||||||+++|||+| |+.||...... .+...
T Consensus 171 ~~~--------------~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~------~~~~~ 229 (325)
T 3kex_A 171 QLL--------------YSEAKTPIKWMALESIHF-GKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLA------EVPDL 229 (325)
T ss_dssp CCC-------------------CCTTTSCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTT------HHHHH
T ss_pred ccc--------------ccCCCCcccccChHHhcc-CCCChhhHhHHhHHHHHHHHhCCCCCccccCHH------HHHHH
Confidence 111 023346789999999764 668899999999999999999 99999754322 33333
Q ss_pred HHhhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHHhhc
Q 005226 646 VKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERIG 706 (707)
Q Consensus 646 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~~L~~i~ 706 (707)
+........+ ......+.+++.+||+.||++||+++++++.|+.+.
T Consensus 230 ~~~~~~~~~~---------------~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~ 275 (325)
T 3kex_A 230 LEKGERLAQP---------------QICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMA 275 (325)
T ss_dssp HHTTCBCCCC---------------TTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHT
T ss_pred HHcCCCCCCC---------------CcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 3332221111 111234678999999999999999999999998864
No 66
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=5.8e-40 Score=347.28 Aligned_cols=258 Identities=14% Similarity=0.153 Sum_probs=201.4
Q ss_pred ceecccCeeEEEEEEe-CCCceEEEEEcCCCchhhHHHHHHHHHHHHhc-CCCceeeeEEEEEcCCcceEEEEeecCCCh
Q 005226 413 YVLGKSGLGIVYKVVL-GNGIPVAVRRLGEGGEQRHREFVTEVQAIAKV-KHPNIVKLRAYYWAPDEKLLISDFISNGNL 490 (707)
Q Consensus 413 ~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lV~e~~~~gsL 490 (707)
+.||+|+||.||+|.. .+++.||||++..... ...+.+|+++++++ +||||+++++++..++..++||||+ +|+|
T Consensus 15 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~-~~~L 91 (330)
T 2izr_A 15 KKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR--APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELL-GPSL 91 (330)
T ss_dssp EECCC-CTTSEEEEEETTTTEEEEEEEEETTCS--SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEECC-CCBH
T ss_pred EEeeccCCceEEEEEECCCCcEEEEEEeccccc--hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEeC-CCCH
Confidence 4799999999999995 5789999999865432 24688999999999 9999999999999999999999999 9999
Q ss_pred HHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCC-----eEEecccccccccccC
Q 005226 491 ANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQ-----PYISDFGLSRLINITG 565 (707)
Q Consensus 491 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~-----~kl~DfGla~~~~~~~ 565 (707)
.+++.... ..+++..+..|+.||+.||+|||+ .+|+||||||+|||++.++. +||+|||+++......
T Consensus 92 ~~~~~~~~----~~~~~~~~~~i~~qi~~~l~~LH~---~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~~~ 164 (330)
T 2izr_A 92 EDLFDLCD----RTFSLKTVLMIAIQLISRMEYVHS---KNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPE 164 (330)
T ss_dssp HHHHHHTT----TCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBCTT
T ss_pred HHHHHHcC----CCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHeeeccCCCCCCceEEEEEcccceeeecCC
Confidence 99998642 369999999999999999999999 89999999999999998887 9999999998765332
Q ss_pred CCCCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchhHHHH
Q 005226 566 NNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVRW 645 (707)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~ 645 (707)
.... ..+.......||+.|+|||++.. ..++.++|||||||++|||++|+.||...... +.......
T Consensus 165 ~~~~---------~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~---~~~~~~~~ 231 (330)
T 2izr_A 165 TKKH---------IPYREHKSLTGTARYMSINTHLG-KEQSRRDDLEALGHMFMYFLRGSLPWQGLKAD---TLKERYQK 231 (330)
T ss_dssp TCCB---------CCCCCCCCCCSCTTTCCHHHHTT-CCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCS---SHHHHHHH
T ss_pred CCcc---------ccccccCCcCCCccccChHHHcC-CCCCchhHHHHHHHHHHHHhcCCCCccccccc---cHHHHHHH
Confidence 2111 11122244568999999999765 67899999999999999999999999765332 11111111
Q ss_pred HHhhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHHhh
Q 005226 646 VKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERI 705 (707)
Q Consensus 646 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~~L~~i 705 (707)
+....... + ...+ ..... ++.+++..||+.||.+||++.+|++.|+++
T Consensus 232 i~~~~~~~-~-----~~~~-----~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~ 279 (330)
T 2izr_A 232 IGDTKRAT-P-----IEVL-----CENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDL 279 (330)
T ss_dssp HHHHHHHS-C-----HHHH-----TTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHH
T ss_pred HHhhhccC-C-----HHHH-----hccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHH
Confidence 11110000 0 0000 01122 788999999999999999999999999876
No 67
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=3.1e-40 Score=338.93 Aligned_cols=244 Identities=30% Similarity=0.417 Sum_probs=185.9
Q ss_pred ceecccCeeEEEEEEeCCCceEEEEEcCCCch----hhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCcceEEEEeecCC
Q 005226 413 YVLGKSGLGIVYKVVLGNGIPVAVRRLGEGGE----QRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNG 488 (707)
Q Consensus 413 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~----~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~g 488 (707)
+.||+|+||.||+|.. .+..||||++..... ...+.+.+|++++++++||||+++++++..++..++||||+++|
T Consensus 13 ~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 91 (271)
T 3dtc_A 13 EIIGIGGFGKVYRAFW-IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGG 91 (271)
T ss_dssp EEEEEETTEEEEEEEE-TTEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEEECCTTE
T ss_pred eeeccCCCeEEEEEEE-cCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEEEcCCCC
Confidence 4899999999999998 488899999875422 22467899999999999999999999999999999999999999
Q ss_pred ChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCC---ceecCCCCCCeEEcC--------CCCeEEecccc
Q 005226 489 NLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRK---FVHGDIKPSNILLDN--------DFQPYISDFGL 557 (707)
Q Consensus 489 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~---iiHrDlk~~NIll~~--------~~~~kl~DfGl 557 (707)
+|.+++... .+++..+..++.|++.||+|||+ ++ |+||||||+||+++. ++.+||+|||+
T Consensus 92 ~L~~~~~~~------~~~~~~~~~i~~~l~~~l~~lH~---~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~ 162 (271)
T 3dtc_A 92 PLNRVLSGK------RIPPDILVNWAVQIARGMNYLHD---EAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGL 162 (271)
T ss_dssp EHHHHHTSS------CCCHHHHHHHHHHHHHHHHHHHH---SSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC
T ss_pred CHHHHhhcC------CCCHHHHHHHHHHHHHHHHHHHh---CCCCceeecCCchHHEEEecccccccccCcceEEccCCc
Confidence 999999643 58999999999999999999999 66 999999999999986 67899999999
Q ss_pred cccccccCCCCCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCc
Q 005226 558 SRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSI 637 (707)
Q Consensus 558 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~ 637 (707)
++....... ....||+.|+|||.+.. ..++.++||||||+++|||++|+.||.....
T Consensus 163 ~~~~~~~~~------------------~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~---- 219 (271)
T 3dtc_A 163 AREWHRTTK------------------MSAAGAYAWMAPEVIRA-SMFSKGSDVWSYGVLLWELLTGEVPFRGIDG---- 219 (271)
T ss_dssp -------------------------------CCGGGSCHHHHHH-CCCSHHHHHHHHHHHHHHHHHCCCTTTTSCH----
T ss_pred ccccccccc------------------cCCCCccceeCHHHhcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCH----
Confidence 976542211 12346899999998654 6788999999999999999999999964321
Q ss_pred cchhHHHHHHhhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHHhh
Q 005226 638 EVPDLVRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERI 705 (707)
Q Consensus 638 ~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~~L~~i 705 (707)
............ .... .......+.+++.+||+.||++|||+.++++.|++|
T Consensus 220 --~~~~~~~~~~~~-~~~~-------------~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 220 --LAVAYGVAMNKL-ALPI-------------PSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp --HHHHHHHHTSCC-CCCC-------------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred --HHHHHhhhcCCC-CCCC-------------CcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 111111111100 0000 012234578999999999999999999999999875
No 68
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=4.3e-40 Score=375.68 Aligned_cols=249 Identities=26% Similarity=0.400 Sum_probs=198.7
Q ss_pred eecccCeeEEEEEEeC---CCceEEEEEcCCCc-hhhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCcceEEEEeecCCC
Q 005226 414 VLGKSGLGIVYKVVLG---NGIPVAVRRLGEGG-EQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGN 489 (707)
Q Consensus 414 ~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gs 489 (707)
.||+|+||.||+|.+. ++..||||+++... ....++|.+|++++++++|||||+++++|.. +..++||||+++|+
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~ 421 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGP 421 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTCB
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCc
Confidence 6999999999999863 56789999998653 3345789999999999999999999999976 56899999999999
Q ss_pred hHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEecccccccccccCCCCC
Q 005226 490 LANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPS 569 (707)
Q Consensus 490 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~ 569 (707)
|.+++.... ..+++..+..|+.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++..........
T Consensus 422 L~~~l~~~~----~~l~~~~~~~i~~qi~~~L~~LH~---~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~ 494 (613)
T 2ozo_A 422 LHKFLVGKR----EEIPVSNVAELLHQVSMGMKYLEE---KNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYT 494 (613)
T ss_dssp HHHHHTTCT----TTSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC-------
T ss_pred HHHHHhhcc----CCCCHHHHHHHHHHHHHHHHHHHH---CCEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceee
Confidence 999997543 359999999999999999999999 8999999999999999999999999999987643221111
Q ss_pred CCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCCCccchhHHHHHHh
Q 005226 570 SSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTSIEVPDLVRWVKK 648 (707)
Q Consensus 570 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~ 648 (707)
......+++.|+|||++.. ..++.++|||||||++|||+| |+.||..... .++...+..
T Consensus 495 -------------~~~~~~~~~~y~APE~~~~-~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~------~~~~~~i~~ 554 (613)
T 2ozo_A 495 -------------ARSAGKWPLKWYAPECINF-RKFSSRSDVWSYGVTMWEALSYGQKPYKKMKG------PEVMAFIEQ 554 (613)
T ss_dssp --------------------CCTTSCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCS------HHHHHHHHT
T ss_pred -------------eccCCCCccceeCHhhhcC-CCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCH------HHHHHHHHc
Confidence 0112234688999999754 678999999999999999998 9999975332 234444444
Q ss_pred hccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHHhh
Q 005226 649 GFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERI 705 (707)
Q Consensus 649 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~~L~~i 705 (707)
..+...+ ......+.+++..||+.||++||++.+|++.|+.+
T Consensus 555 ~~~~~~p---------------~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~ 596 (613)
T 2ozo_A 555 GKRMECP---------------PECPPELYALMSDCWIYKWEDRPDFLTVEQRMRAC 596 (613)
T ss_dssp TCCCCCC---------------TTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHH
T ss_pred CCCCCCC---------------CcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 3322211 12335678999999999999999999999999875
No 69
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=7.6e-40 Score=340.87 Aligned_cols=254 Identities=28% Similarity=0.443 Sum_probs=199.9
Q ss_pred cceecccCeeEEEEEEeCC----CceEEEEEcCCCch-hhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCcc-eEEEEee
Q 005226 412 AYVLGKSGLGIVYKVVLGN----GIPVAVRRLGEGGE-QRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEK-LLISDFI 485 (707)
Q Consensus 412 ~~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~-~lV~e~~ 485 (707)
.+.||+|+||+||+|...+ +..||+|++..... ...+.|.+|++++++++||||+++++++.+.+.. ++|+||+
T Consensus 26 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e~~ 105 (298)
T 3pls_A 26 DRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPYM 105 (298)
T ss_dssp EEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEECCC
T ss_pred CceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEEEecc
Confidence 4589999999999998532 33799999876533 4457899999999999999999999999877665 9999999
Q ss_pred cCCChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEecccccccccccC
Q 005226 486 SNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITG 565 (707)
Q Consensus 486 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~ 565 (707)
.+|+|.+++.... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++......
T Consensus 106 ~~~~L~~~~~~~~----~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~ 178 (298)
T 3pls_A 106 CHGDLLQFIRSPQ----RNPTVKDLISFGLQVARGMEYLAE---QKFVHRDLAARNCMLDESFTVKVADFGLARDILDRE 178 (298)
T ss_dssp TTCBHHHHHHCTT----CCCBHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGG
T ss_pred cCCCHHHHHhccc----cCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCcceEEEcCCCcEEeCcCCCcccccCCc
Confidence 9999999998643 358999999999999999999999 899999999999999999999999999998654321
Q ss_pred CCCCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchhHHHH
Q 005226 566 NNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVRW 645 (707)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~ 645 (707)
.... .......++..|+|||.+.. ..++.++||||||+++|||++|+.|+.... +...+...
T Consensus 179 ~~~~------------~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~g~~~~~~~~-----~~~~~~~~ 240 (298)
T 3pls_A 179 YYSV------------QQHRHARLPVKWTALESLQT-YRFTTKSDVWSFGVLLWELLTRGAPPYRHI-----DPFDLTHF 240 (298)
T ss_dssp GGCS------------CCSSCTTCGGGGSCHHHHTT-CCCCHHHHHHHHHHHHHHHHHTSCCTTTTS-----CGGGHHHH
T ss_pred cccc------------ccCcCCCCCccccChhhhcc-CCCChhhchhhHHHHHHHHhhCCCCCCccC-----CHHHHHHH
Confidence 1110 01123456889999999754 678899999999999999999766654322 22233343
Q ss_pred HHhhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHHhh
Q 005226 646 VKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERI 705 (707)
Q Consensus 646 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~~L~~i 705 (707)
+........+ ......+.+++.+||+.||.+|||++++++.|+++
T Consensus 241 ~~~~~~~~~~---------------~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~ 285 (298)
T 3pls_A 241 LAQGRRLPQP---------------EYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQI 285 (298)
T ss_dssp HHTTCCCCCC---------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred hhcCCCCCCC---------------ccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 3333221111 11224578999999999999999999999999987
No 70
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.4e-40 Score=346.49 Aligned_cols=244 Identities=20% Similarity=0.272 Sum_probs=196.3
Q ss_pred ceecccCeeEEEEEEeC-CCceEEEEEcCCCchhhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCcceEEEEeecCCChH
Q 005226 413 YVLGKSGLGIVYKVVLG-NGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLA 491 (707)
Q Consensus 413 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL~ 491 (707)
+.||+|+||+||+|... ++..||+|.+..... ....+.+|++++++++||||+++++++.+.+..++||||+++|+|.
T Consensus 11 ~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~-~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~g~~L~ 89 (321)
T 1tki_A 11 EDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGT-DQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFISGLDIF 89 (321)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEECCCTH-HHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCCCCCBHH
T ss_pred eEEecCCCeEEEEEEECCCCcEEEEEEEecCcc-cHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEeCCCCCHH
Confidence 47999999999999965 688999999875543 3367889999999999999999999999999999999999999999
Q ss_pred HHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcC--CCCeEEecccccccccccCCCCC
Q 005226 492 NALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDN--DFQPYISDFGLSRLINITGNNPS 569 (707)
Q Consensus 492 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~--~~~~kl~DfGla~~~~~~~~~~~ 569 (707)
+++.... ..+++..+..++.||+.||+|||+ .+|+||||||+||+++. ++.+||+|||+++.......
T Consensus 90 ~~l~~~~----~~~~~~~~~~i~~qi~~al~~lH~---~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~--- 159 (321)
T 1tki_A 90 ERINTSA----FELNEREIVSYVHQVCEALQFLHS---HNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDN--- 159 (321)
T ss_dssp HHHTSSS----CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCE---
T ss_pred HHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHH---CCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCCc---
Confidence 9997543 358999999999999999999999 89999999999999987 78999999999987642211
Q ss_pred CCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchhHHHHHHhh
Q 005226 570 SSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVRWVKKG 649 (707)
Q Consensus 570 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~ 649 (707)
.....||+.|+|||++.. ..++.++|||||||++|||++|+.||..... ......+..
T Consensus 160 --------------~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~------~~~~~~i~~- 217 (321)
T 1tki_A 160 --------------FRLLFTAPEYYAPEVHQH-DVVSTATDMWSLGTLVYVLLSGINPFLAETN------QQIIENIMN- 217 (321)
T ss_dssp --------------EEEEESCGGGSCHHHHTT-CEECHHHHHHHHHHHHHHHHHSSCTTCCSSH------HHHHHHHHH-
T ss_pred --------------cccccCChhhcCcHHhcC-CCCCchhhHHHHHHHHHHHHhCCCCCcCCCH------HHHHHHHHc-
Confidence 123457999999999764 5678999999999999999999999965321 122222211
Q ss_pred ccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 005226 650 FEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSE 700 (707)
Q Consensus 650 ~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~ 700 (707)
....+ +... ......++.+++.+|+..||++|||+.|+++
T Consensus 218 --~~~~~----~~~~-----~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~ 257 (321)
T 1tki_A 218 --AEYTF----DEEA-----FKEISIEAMDFVDRLLVKERKSRMTASEALQ 257 (321)
T ss_dssp --TCCCC----CHHH-----HTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred --CCCCC----Chhh-----hccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 11110 0000 0122356789999999999999999999986
No 71
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=7.8e-41 Score=346.85 Aligned_cols=246 Identities=21% Similarity=0.325 Sum_probs=197.3
Q ss_pred cceecccCeeEEEEEEeCC-C-------ceEEEEEcCCCchhhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCcceEEEE
Q 005226 412 AYVLGKSGLGIVYKVVLGN-G-------IPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISD 483 (707)
Q Consensus 412 ~~~lG~G~~g~Vy~~~~~~-~-------~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e 483 (707)
.+.||+|+||+||+|.... + ..||+|++........+.|.+|++++++++||||+++++++..++..++|||
T Consensus 13 ~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 92 (289)
T 4fvq_A 13 NESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDENILVQE 92 (289)
T ss_dssp EEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTCCEEEEE
T ss_pred eeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCCCEEEEE
Confidence 3479999999999998643 3 4699999977666666889999999999999999999999999999999999
Q ss_pred eecCCChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCC--------eEEecc
Q 005226 484 FISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQ--------PYISDF 555 (707)
Q Consensus 484 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~--------~kl~Df 555 (707)
|+++|+|.+++.... ..+++..+..++.||+.||+|||+ ++|+||||||+||+++.++. +||+||
T Consensus 93 ~~~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~Df 165 (289)
T 4fvq_A 93 FVKFGSLDTYLKKNK----NCINILWKLEVAKQLAAAMHFLEE---NTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDP 165 (289)
T ss_dssp CCTTCBHHHHHHHTG----GGCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEEECCBGGGTBCCEEEECCC
T ss_pred CCCCCCHHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHhh---CCeECCCcCcceEEEecCCcccccccceeeeccC
Confidence 999999999998653 248999999999999999999999 89999999999999998887 999999
Q ss_pred cccccccccCCCCCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCC
Q 005226 556 GLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTST 635 (707)
Q Consensus 556 Gla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~ 635 (707)
|++...... ....++..|+|||++.....++.++||||||+++|||++|..|+.....
T Consensus 166 g~~~~~~~~--------------------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~-- 223 (289)
T 4fvq_A 166 GISITVLPK--------------------DILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALD-- 223 (289)
T ss_dssp CSCTTTSCH--------------------HHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSC--
T ss_pred cccccccCc--------------------cccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccc--
Confidence 998654311 2344688899999876546788999999999999999997655443211
Q ss_pred CccchhHHHHHHhhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHHhhc
Q 005226 636 SIEVPDLVRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERIG 706 (707)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~~L~~i~ 706 (707)
............... ......+.+++.+||+.||++|||++++++.|+++-
T Consensus 224 ---~~~~~~~~~~~~~~~-----------------~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~ 274 (289)
T 4fvq_A 224 ---SQRKLQFYEDRHQLP-----------------APKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLF 274 (289)
T ss_dssp ---HHHHHHHHHTTCCCC-----------------CCSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC
T ss_pred ---hHHHHHHhhccCCCC-----------------CCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhc
Confidence 111111111111100 011234678999999999999999999999999873
No 72
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=1.2e-39 Score=351.46 Aligned_cols=245 Identities=20% Similarity=0.276 Sum_probs=189.7
Q ss_pred cceecccCeeEEEEEEeC-CCceEEEEEcCCCc---hhhHHHHHHHHHHHHhc-CCCceeeeEEEEEcCCcceEEEEeec
Q 005226 412 AYVLGKSGLGIVYKVVLG-NGIPVAVRRLGEGG---EQRHREFVTEVQAIAKV-KHPNIVKLRAYYWAPDEKLLISDFIS 486 (707)
Q Consensus 412 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lV~e~~~ 486 (707)
.++||+|+||.||+|+.. +++.||+|++++.. ....+.+.+|..++.++ +||||+++++++.+++..++||||++
T Consensus 57 ~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lV~E~~~ 136 (396)
T 4dc2_A 57 LRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVN 136 (396)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEEEEEcCC
Confidence 348999999999999975 67889999987542 22235678899999887 89999999999999999999999999
Q ss_pred CCChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEecccccccccccCC
Q 005226 487 NGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGN 566 (707)
Q Consensus 487 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~~ 566 (707)
+|+|..++.... .+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++.......
T Consensus 137 gg~L~~~l~~~~-----~l~~~~~~~~~~qi~~aL~~LH~---~givHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~~ 208 (396)
T 4dc2_A 137 GGDLMFHMQRQR-----KLPEEHARFYSAEISLALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD 208 (396)
T ss_dssp TCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTC
T ss_pred CCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHH---CCEEeccCCHHHEEECCCCCEEEeecceeeecccCCC
Confidence 999999998643 59999999999999999999999 8999999999999999999999999999975332111
Q ss_pred CCCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchhHHHHH
Q 005226 567 NPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVRWV 646 (707)
Q Consensus 567 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~ 646 (707)
. .....||+.|+|||++.. ..++.++|||||||++|||++|+.||........... ...+++
T Consensus 209 ~----------------~~~~~gt~~Y~aPE~l~~-~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~-~~~~~~ 270 (396)
T 4dc2_A 209 T----------------TSTFCGTPNYIAPEILRG-EDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQ-NTEDYL 270 (396)
T ss_dssp C----------------BCCCCBCGGGCCHHHHTT-CCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC-------CCHHHH
T ss_pred c----------------cccccCCcccCCchhhcC-CCCChHHHHHHHHHHHHHHHhCCCCCcccccccccch-hhHHHH
Confidence 1 123467999999999765 6789999999999999999999999975432211000 001111
Q ss_pred Hhhc-cccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCCh
Q 005226 647 KKGF-EEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRM 695 (707)
Q Consensus 647 ~~~~-~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~ 695 (707)
.... .....+ ......++.+++.+||+.||++||++
T Consensus 271 ~~~i~~~~~~~-------------p~~~s~~~~~li~~lL~~dP~~R~~~ 307 (396)
T 4dc2_A 271 FQVILEKQIRI-------------PRSLSVKAASVLKSFLNKDPKERLGC 307 (396)
T ss_dssp HHHHHHCCCCC-------------CTTSCHHHHHHHHHHTCSCTTTSTTC
T ss_pred HHHHhccccCC-------------CCcCCHHHHHHHHHHhcCCHhHcCCC
Confidence 1111 111110 11123457899999999999999996
No 73
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.2e-39 Score=344.18 Aligned_cols=245 Identities=24% Similarity=0.324 Sum_probs=195.9
Q ss_pred cceecccCeeEEEEEEeC-CCceEEEEEcCCCchh------hHHHHHHHHHHHHhcCCCceeeeEEEEEcCCcceEEEEe
Q 005226 412 AYVLGKSGLGIVYKVVLG-NGIPVAVRRLGEGGEQ------RHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDF 484 (707)
Q Consensus 412 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~ 484 (707)
.+.||+|+||.||+|... +|..||+|.+...... ..+.+.+|++++++++||||+++++++.+++..++||||
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 95 (326)
T 2y0a_A 16 GEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILEL 95 (326)
T ss_dssp EEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred ceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEEc
Confidence 458999999999999975 6899999998654221 246789999999999999999999999999999999999
Q ss_pred ecCCChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCC----CeEEeccccccc
Q 005226 485 ISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDF----QPYISDFGLSRL 560 (707)
Q Consensus 485 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~----~~kl~DfGla~~ 560 (707)
+++|+|.+++.... .+++..+..++.||+.||+|||+ .+|+||||||+||+++.++ .+||+|||+++.
T Consensus 96 ~~~~~L~~~l~~~~-----~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~ 167 (326)
T 2y0a_A 96 VAGGELFDFLAEKE-----SLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 167 (326)
T ss_dssp CCSCBHHHHHTTSS-----CCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESCSSSSSCCEEECCCTTCEE
T ss_pred CCCCCHHHHHHhcC-----CcCHHHHHHHHHHHHHHHHHHHH---CCeEcCCCCHHHEEEecCCCCCCCEEEEECCCCeE
Confidence 99999999997543 59999999999999999999999 8999999999999999887 799999999987
Q ss_pred ccccCCCCCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccch
Q 005226 561 INITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVP 640 (707)
Q Consensus 561 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~ 640 (707)
....... ....||+.|+|||++.. ..++.++|||||||++|||++|+.||..... .
T Consensus 168 ~~~~~~~-----------------~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~------~ 223 (326)
T 2y0a_A 168 IDFGNEF-----------------KNIFGTPEFVAPEIVNY-EPLGLEADMWSIGVITYILLSGASPFLGDTK------Q 223 (326)
T ss_dssp CCTTSCC-----------------CCCCSCTTTCCHHHHTT-CCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH------H
T ss_pred CCCCCcc-----------------ccccCCcCcCCceeecC-CCCCcHHHHHHHHHHHHHHHHCcCCCCCCCH------H
Confidence 6422111 22357999999998654 6788999999999999999999999964321 1
Q ss_pred hHHHHHHhhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 005226 641 DLVRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSE 700 (707)
Q Consensus 641 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~ 700 (707)
.....+... ... ..+.. .......+.+++.+||+.||++|||+.++++
T Consensus 224 ~~~~~~~~~---~~~---~~~~~------~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 271 (326)
T 2y0a_A 224 ETLANVSAV---NYE---FEDEY------FSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271 (326)
T ss_dssp HHHHHHHHT---CCC---CCHHH------HTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred HHHHHHHhc---CCC---cCccc------cccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 111111111 100 00110 0122345789999999999999999999986
No 74
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=1.2e-39 Score=349.00 Aligned_cols=245 Identities=22% Similarity=0.298 Sum_probs=196.0
Q ss_pred cceecccCeeEEEEEEeC-CCceEEEEEcCCC--chhhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCcceEEEEeecCC
Q 005226 412 AYVLGKSGLGIVYKVVLG-NGIPVAVRRLGEG--GEQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNG 488 (707)
Q Consensus 412 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~g 488 (707)
.+.||+|+||.||+|... ++..||+|++... .....+.+.+|++++++++||||+++++++.+++..++||||+++|
T Consensus 34 ~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~e~~~gg 113 (362)
T 2bdw_A 34 KEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGG 113 (362)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred eeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCCCC
Confidence 458999999999999965 6899999998654 2334567899999999999999999999999999999999999999
Q ss_pred ChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCC---CCeEEecccccccccccC
Q 005226 489 NLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDND---FQPYISDFGLSRLINITG 565 (707)
Q Consensus 489 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~---~~~kl~DfGla~~~~~~~ 565 (707)
+|.+++.... .+++..+..++.||+.||+|||+ .+|+||||||+|||++.+ +.+||+|||+++......
T Consensus 114 ~L~~~l~~~~-----~~~~~~~~~~~~qi~~al~~lH~---~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~~ 185 (362)
T 2bdw_A 114 ELFEDIVARE-----FYSEADASHCIQQILESIAYCHS---NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE 185 (362)
T ss_dssp BHHHHHTTCS-----CCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTTCC
T ss_pred CHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCchHHEEEecCCCCCCEEEeecCcceEecCCc
Confidence 9999997643 58999999999999999999999 899999999999999865 459999999998654221
Q ss_pred CCCCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchhHHHH
Q 005226 566 NNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVRW 645 (707)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~ 645 (707)
.. ....||+.|+|||++.. ..++.++|||||||++|||++|+.||.... ...+...
T Consensus 186 ~~-----------------~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~~ll~g~~Pf~~~~------~~~~~~~ 241 (362)
T 2bdw_A 186 AW-----------------HGFAGTPGYLSPEVLKK-DPYSKPVDIWACGVILYILLVGYPPFWDED------QHRLYAQ 241 (362)
T ss_dssp SC-----------------CCSCSCTTTCCHHHHTT-CCCCTHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHH
T ss_pred cc-----------------ccCCCCccccCHHHHcc-CCCCchhhHHHHHHHHHHHHHCCCCCCCCC------HHHHHHH
Confidence 11 22457999999999764 678999999999999999999999996432 1223332
Q ss_pred HHhhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 005226 646 VKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSE 700 (707)
Q Consensus 646 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~ 700 (707)
+......... + ........+.+++.+||+.||++||++.++++
T Consensus 242 i~~~~~~~~~------~------~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 284 (362)
T 2bdw_A 242 IKAGAYDYPS------P------EWDTVTPEAKSLIDSMLTVNPKKRITADQALK 284 (362)
T ss_dssp HHHTCCCCCT------T------GGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred HHhCCCCCCc------c------cccCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 2222111000 0 00112345789999999999999999999875
No 75
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=2.4e-40 Score=341.39 Aligned_cols=249 Identities=27% Similarity=0.467 Sum_probs=200.0
Q ss_pred cceecccCeeEEEEEEeCCCceEEEEEcCCCchhhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCcceEEEEeecCCChH
Q 005226 412 AYVLGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLA 491 (707)
Q Consensus 412 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL~ 491 (707)
.+.||+|+||.||+|...++..||||++...... .+.+.+|++++++++||||+++++++. ++..++||||+++|+|.
T Consensus 18 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~~~~L~ 95 (279)
T 1qpc_A 18 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS-PDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYMENGSLV 95 (279)
T ss_dssp EEEEEEETTEEEEEEEETTTEEEEEEEECTTSSC-HHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEECCTTCBHH
T ss_pred eeeecCCCCeEEEEEEEcCCcEEEEEEecCCccc-HHHHHHHHHHHHhCCCcCcceEEEEEc-CCCcEEEEecCCCCCHH
Confidence 3489999999999999988889999998765433 378999999999999999999999986 55689999999999999
Q ss_pred HHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEecccccccccccCCCCCCC
Q 005226 492 NALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSS 571 (707)
Q Consensus 492 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~ 571 (707)
+++.... ...+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++.........
T Consensus 96 ~~l~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~--- 166 (279)
T 1qpc_A 96 DFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTA--- 166 (279)
T ss_dssp HHTTSHH---HHTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEEC---
T ss_pred HHHhcCC---CCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHhhEEEcCCCCEEECCCcccccccCccccc---
Confidence 9997532 1258999999999999999999999 899999999999999999999999999998765321111
Q ss_pred CCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCCCccchhHHHHHHhhc
Q 005226 572 GGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTSIEVPDLVRWVKKGF 650 (707)
Q Consensus 572 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~ 650 (707)
.....++..|+|||.+.. ..++.++||||||+++|||++ |+.||.... .......+....
T Consensus 167 ------------~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~el~~~g~~p~~~~~------~~~~~~~~~~~~ 227 (279)
T 1qpc_A 167 ------------REGAKFPIKWTAPEAINY-GTFTIKSDVWSFGILLTEIVTHGRIPYPGMT------NPEVIQNLERGY 227 (279)
T ss_dssp ------------CTTCCCCTTTSCHHHHHH-CEECHHHHHHHHHHHHHHHHTTTCCSSTTCC------HHHHHHHHHTTC
T ss_pred ------------ccCCCCccCccChhhhcc-CCCCchhhhHHHHHHHHHHHhCCCCCCcccC------HHHHHHHHhccc
Confidence 012335778999998654 567899999999999999999 899986432 123333333222
Q ss_pred cccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHHhh
Q 005226 651 EEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERI 705 (707)
Q Consensus 651 ~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~~L~~i 705 (707)
....+ ......+.+++.+|++.||++|||+.++++.|+++
T Consensus 228 ~~~~~---------------~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~ 267 (279)
T 1qpc_A 228 RMVRP---------------DNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDF 267 (279)
T ss_dssp CCCCC---------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CCCCc---------------ccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHH
Confidence 11111 11234678999999999999999999999999886
No 76
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=2e-40 Score=343.51 Aligned_cols=250 Identities=29% Similarity=0.442 Sum_probs=203.6
Q ss_pred cceecccCeeEEEEEEeC-CCceEEEEEcCCCchhhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCcceEEEEeecCCCh
Q 005226 412 AYVLGKSGLGIVYKVVLG-NGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNL 490 (707)
Q Consensus 412 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL 490 (707)
.+.||+|+||.||+|... ++..||+|++..... ..+.+.+|++++++++||||+++++++.+++..++||||+++|+|
T Consensus 18 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 96 (288)
T 3kfa_A 18 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNL 96 (288)
T ss_dssp EEESGGGTTCSEEEEEEGGGTEEEEEEEECSCST-HHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCTTEEH
T ss_pred EeecCCCCceeEEEeEecCCCEEEEEEecCcCHH-HHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEEcCCCCcH
Confidence 358999999999999976 478899999976543 347899999999999999999999999999999999999999999
Q ss_pred HHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEecccccccccccCCCCCC
Q 005226 491 ANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSS 570 (707)
Q Consensus 491 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~~ 570 (707)
.+++.... ...+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++........
T Consensus 97 ~~~~~~~~---~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~--- 167 (288)
T 3kfa_A 97 LDYLRECN---RQEVSAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT--- 167 (288)
T ss_dssp HHHHHHCC---TTTSCHHHHHHHHHHHHHHHHHHHH---HTCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSSSE---
T ss_pred HHHHHhcc---cCCccHhHHHHHHHHHHHHHHHHHH---CCccCCCCCcceEEEcCCCCEEEccCccceeccCCccc---
Confidence 99998643 2358999999999999999999999 89999999999999999999999999999865422110
Q ss_pred CCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCCCccchhHHHHHHhh
Q 005226 571 SGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTSIEVPDLVRWVKKG 649 (707)
Q Consensus 571 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~ 649 (707)
......+++.|+|||.+.. ..++.++||||||+++|||++ |+.||..... ....+.+...
T Consensus 168 ------------~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~------~~~~~~~~~~ 228 (288)
T 3kfa_A 168 ------------AHAGAKFPIKWTAPESLAY-NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL------SQVYELLEKD 228 (288)
T ss_dssp ------------EETTEEECGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCG------GGHHHHHHTT
T ss_pred ------------cccCCccccCcCChhhhcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH------HHHHHHHhcc
Confidence 1122345788999998654 678899999999999999999 9999865322 2333333332
Q ss_pred ccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHHhh
Q 005226 650 FEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERI 705 (707)
Q Consensus 650 ~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~~L~~i 705 (707)
.....+ ......+.+++.+|++.||.+||++.++++.|+.+
T Consensus 229 ~~~~~~---------------~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~ 269 (288)
T 3kfa_A 229 YRMERP---------------EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269 (288)
T ss_dssp CCCCCC---------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CCCCCC---------------CCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHH
Confidence 222111 11234578999999999999999999999999876
No 77
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=6e-40 Score=336.47 Aligned_cols=247 Identities=22% Similarity=0.314 Sum_probs=196.5
Q ss_pred cceecccCeeEEEEEEeCCCceEEEEEcCCCc--hhhHHHHHHHHHHHHhcCCCceeeeEEEEEcC--CcceEEEEeecC
Q 005226 412 AYVLGKSGLGIVYKVVLGNGIPVAVRRLGEGG--EQRHREFVTEVQAIAKVKHPNIVKLRAYYWAP--DEKLLISDFISN 487 (707)
Q Consensus 412 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~~~lV~e~~~~ 487 (707)
.+.||+|+||.||+|.. ++..||||++.... ....+.|.+|+.++++++||||+++++++.+. +..++||||+++
T Consensus 15 ~~~lg~G~~g~V~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~ 93 (271)
T 3kmu_A 15 LTKLNENHSGELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPY 93 (271)
T ss_dssp EEEEEEETTEEEEEEEE-TTEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEEECCTT
T ss_pred HHHhcCCCcceEEEEEE-CCeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeeecccCC
Confidence 34899999999999998 48889999987653 34457899999999999999999999999887 678999999999
Q ss_pred CChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCC--ceecCCCCCCeEEcCCCCeEEecccccccccccC
Q 005226 488 GNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRK--FVHGDIKPSNILLDNDFQPYISDFGLSRLINITG 565 (707)
Q Consensus 488 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~--iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~ 565 (707)
|+|.+++.... ...+++..+..|+.||+.||+|||+ .+ |+||||||+||+++.++.++|+|||++.....
T Consensus 94 ~~L~~~l~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~---~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~~-- 165 (271)
T 3kmu_A 94 GSLYNVLHEGT---NFVVDQSQAVKFALDMARGMAFLHT---LEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQS-- 165 (271)
T ss_dssp CBHHHHHHSCS---SCCCCHHHHHHHHHHHHHHHHHHTT---SSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTSC--
T ss_pred CcHHHHHhhcc---cCCCCHHHHHHHHHHHHHHHHHHhc---CCCceecCCCccceEEEcCCcceeEEeccceeeecc--
Confidence 99999998653 2358999999999999999999999 67 99999999999999999999999998654221
Q ss_pred CCCCCCCCCcCCCCCCCCccccccCccccCCCCCCCCC--CCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchhHH
Q 005226 566 NNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGN--RPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLV 643 (707)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~~ 643 (707)
....||+.|+|||.+.... .++.++||||||+++|||++|+.||..... ....
T Consensus 166 -------------------~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~------~~~~ 220 (271)
T 3kmu_A 166 -------------------PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSN------MEIG 220 (271)
T ss_dssp -------------------TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCH------HHHH
T ss_pred -------------------cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccCh------HHHH
Confidence 1234588999999876422 223489999999999999999999964321 1111
Q ss_pred HHH-HhhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHHhhcC
Q 005226 644 RWV-KKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERIGT 707 (707)
Q Consensus 644 ~~~-~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~~L~~i~~ 707 (707)
... ........ . ......+.+++.+||+.||++|||++++++.|+++.+
T Consensus 221 ~~~~~~~~~~~~--~-------------~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~ 270 (271)
T 3kmu_A 221 MKVALEGLRPTI--P-------------PGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD 270 (271)
T ss_dssp HHHHHSCCCCCC--C-------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred HHHHhcCCCCCC--C-------------CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 111 11111110 0 1123457899999999999999999999999999864
No 78
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=1.6e-39 Score=338.38 Aligned_cols=259 Identities=15% Similarity=0.197 Sum_probs=202.4
Q ss_pred ceecccCeeEEEEEEe-CCCceEEEEEcCCCchhhHHHHHHHHHHHHhc-CCCceeeeEEEEEcCCcceEEEEeecCCCh
Q 005226 413 YVLGKSGLGIVYKVVL-GNGIPVAVRRLGEGGEQRHREFVTEVQAIAKV-KHPNIVKLRAYYWAPDEKLLISDFISNGNL 490 (707)
Q Consensus 413 ~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lV~e~~~~gsL 490 (707)
+.||+|+||.||+|.. .+++.||||++..... ...+.+|+++++++ +|+|++++++++......++||||+ +|+|
T Consensus 16 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~L 92 (298)
T 1csn_A 16 RRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD--APQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL-GPSL 92 (298)
T ss_dssp EEEEECSSCEEEEEEETTTTEEEEEEEEECCTT--SCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC-CCBH
T ss_pred EEEeecCCEEEEEEEECCCCcEEEEEEeccCCc--cHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEEec-CCCH
Confidence 4799999999999995 5789999999865432 25688899999999 8999999999999999999999999 9999
Q ss_pred HHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCC-----eEEecccccccccccC
Q 005226 491 ANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQ-----PYISDFGLSRLINITG 565 (707)
Q Consensus 491 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~-----~kl~DfGla~~~~~~~ 565 (707)
.+++.... ..+++..+..|+.||+.||+|||+ ++|+||||||+||+++.++. +||+|||+++......
T Consensus 93 ~~~l~~~~----~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~~ 165 (298)
T 1csn_A 93 EDLLDLCG----RKFSVKTVAMAAKQMLARVQSIHE---KSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPV 165 (298)
T ss_dssp HHHHHHTT----TCCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTT
T ss_pred HHHHHHhc----cCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEeccCCCCCCCeEEEEECcccccccccc
Confidence 99998653 259999999999999999999999 89999999999999987776 9999999998765432
Q ss_pred CCCCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchhHHHH
Q 005226 566 NNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVRW 645 (707)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~ 645 (707)
... ...+.......||+.|+|||++.. ..++.++||||||+++|||++|+.||....... .......
T Consensus 166 ~~~---------~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~---~~~~~~~ 232 (298)
T 1csn_A 166 TKQ---------HIPYREKKNLSGTARYMSINTHLG-REQSRRDDLEALGHVFMYFLRGSLPWQGLKAAT---NKQKYER 232 (298)
T ss_dssp TCC---------BCCCCCCCCCCSCTTTCCHHHHTT-CCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCC---HHHHHHH
T ss_pred ccc---------cccccCccCCCCCcccCCchhhcC-CCCChHHHHHHHHHHHHHHHcCCCCcchhhccc---cHHHHHH
Confidence 211 111122244568999999999665 678999999999999999999999997643321 1111111
Q ss_pred HHhhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHHhh
Q 005226 646 VKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERI 705 (707)
Q Consensus 646 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~~L~~i 705 (707)
+........ .+. ........+.+++.+||+.||++||++++|++.|+++
T Consensus 233 ~~~~~~~~~------~~~-----~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~ 281 (298)
T 1csn_A 233 IGEKKQSTP------LRE-----LCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKV 281 (298)
T ss_dssp HHHHHHHSC------HHH-----HTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHH
T ss_pred HHhhccCcc------HHH-----HHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHH
Confidence 111100000 000 0012345788999999999999999999999999886
No 79
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=2e-39 Score=341.45 Aligned_cols=268 Identities=21% Similarity=0.226 Sum_probs=202.5
Q ss_pred ceecccCeeEEEEEEeC-CCceEEEEEcCCCc-hhhHHHHHHHHHHHHhcCCCceeeeEEEEEcCC--cceEEEEeecCC
Q 005226 413 YVLGKSGLGIVYKVVLG-NGIPVAVRRLGEGG-EQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPD--EKLLISDFISNG 488 (707)
Q Consensus 413 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~--~~~lV~e~~~~g 488 (707)
+.||+|+||+||+|... +++.||||++.... ....+.+.+|++++++++||||+++++++...+ ..++||||+++|
T Consensus 15 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~ 94 (319)
T 4euu_A 15 DILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCG 94 (319)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEEECCTTC
T ss_pred EEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEEeCCCCC
Confidence 38999999999999975 58999999987643 233477889999999999999999999998765 668999999999
Q ss_pred ChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEE----cCCCCeEEeccccccccccc
Q 005226 489 NLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILL----DNDFQPYISDFGLSRLINIT 564 (707)
Q Consensus 489 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll----~~~~~~kl~DfGla~~~~~~ 564 (707)
+|.+++..... ...+++..++.|+.||+.||+|||+ .+|+||||||+||++ +.++.+||+|||+++.....
T Consensus 95 ~L~~~l~~~~~--~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~~~ 169 (319)
T 4euu_A 95 SLYTVLEEPSN--AYGLPESEFLIVLRDVVGGMNHLRE---NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDD 169 (319)
T ss_dssp BHHHHHHSGGG--TTCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEECTTSCEEEEECCCTTCEECCTT
T ss_pred CHHHHHHHhcc--ccCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHEEEeccCCCCceEEEccCCCceecCCC
Confidence 99999986532 2349999999999999999999999 899999999999999 78888999999999876532
Q ss_pred CCCCCCCCCCcCCCCCCCCccccccCccccCCCCCCC-------CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCc
Q 005226 565 GNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVP-------GNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSI 637 (707)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-------~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~ 637 (707)
... ....||..|+|||++.. +..++.++|||||||++|||+||+.||.......
T Consensus 170 ~~~-----------------~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-- 230 (319)
T 4euu_A 170 EQF-----------------VSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPR-- 230 (319)
T ss_dssp CCB-----------------CCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGG--
T ss_pred Cce-----------------eecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccc--
Confidence 211 12346899999998541 3678899999999999999999999997543221
Q ss_pred cchhHHHHHHhhccccCCCchhch---------HHH-HhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHHhh
Q 005226 638 EVPDLVRWVKKGFEEENPLSDMVD---------AML-LQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERI 705 (707)
Q Consensus 638 ~~~~~~~~~~~~~~~~~~~~~~~d---------~~l-~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~~L~~i 705 (707)
........+......... ..+.+ ..+ ............+.+++.+||+.||++|||++|+++...+.
T Consensus 231 ~~~~~~~~~~~~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~ 307 (319)
T 4euu_A 231 RNKEVMYKIITGKPSGAI-SGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDI 307 (319)
T ss_dssp GCHHHHHHHHHHCCTTCC-EEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHH
T ss_pred hhHHHHHHHhcCCCcccc-hhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHH
Confidence 111222212111110000 00000 000 00011244556788999999999999999999999987654
No 80
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=9e-40 Score=339.03 Aligned_cols=254 Identities=26% Similarity=0.398 Sum_probs=190.0
Q ss_pred ceecccCeeEEEEEEeCCCceEEEEEcCCCc--hhhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCcceEEEEeecCCCh
Q 005226 413 YVLGKSGLGIVYKVVLGNGIPVAVRRLGEGG--EQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNL 490 (707)
Q Consensus 413 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL 490 (707)
+.||+|+||+||+|...+ .||||+++... ....+.|.+|++++++++||||+++++++ ..+..++||||+++++|
T Consensus 30 ~~lG~G~~g~Vy~~~~~~--~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e~~~~~~L 106 (289)
T 3og7_A 30 QRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQWCEGSSL 106 (289)
T ss_dssp EEEEECSSEEEEEEESSS--EEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEEECCCEEEH
T ss_pred eEecCCCCeEEEEEEEcC--ceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEEEecCCCcH
Confidence 489999999999998643 59999987543 34457899999999999999999999965 56678999999999999
Q ss_pred HHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEecccccccccccCCCCCC
Q 005226 491 ANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSS 570 (707)
Q Consensus 491 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~~ 570 (707)
.+++.... ..+++..++.|+.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++.........
T Consensus 107 ~~~l~~~~----~~~~~~~~~~i~~qi~~~L~~lH~---~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~-- 177 (289)
T 3og7_A 107 YHHLHASE----TKFEMKKLIDIARQTARGMDYLHA---KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSH-- 177 (289)
T ss_dssp HHHHTTC-------CCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEETTTEEEECCCC--------------
T ss_pred HHHHhhcc----CCCCHHHHHHHHHHHHHHHHHHHh---CCcccccCccceEEECCCCCEEEccceeccccccccccc--
Confidence 99997543 359999999999999999999999 899999999999999999999999999997654221110
Q ss_pred CCCCcCCCCCCCCccccccCccccCCCCCC--CCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchhHHHHHHh
Q 005226 571 SGGFMGGALPYMKPVQTEKTNNYRAPEARV--PGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVRWVKK 648 (707)
Q Consensus 571 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~ 648 (707)
......||+.|+|||.+. .+..++.++||||||+++|||++|+.||..... ...+.+.+..
T Consensus 178 ------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~-----~~~~~~~~~~ 240 (289)
T 3og7_A 178 ------------QFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINN-----RDQIIEMVGR 240 (289)
T ss_dssp ------------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCC-----HHHHHHHHHH
T ss_pred ------------cccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccch-----HHHHHHHhcc
Confidence 012345799999999865 235678899999999999999999999965322 1222232222
Q ss_pred hccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHHhhc
Q 005226 649 GFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERIG 706 (707)
Q Consensus 649 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~~L~~i~ 706 (707)
....... ..+ .......+.+++.+||+.||++||++.++++.|+++.
T Consensus 241 ~~~~~~~-~~~----------~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~ 287 (289)
T 3og7_A 241 GSLSPDL-SKV----------RSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELA 287 (289)
T ss_dssp TSCCCCT-TSS----------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred cccCcch-hhc----------cccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHh
Confidence 2111110 000 1122356789999999999999999999999999885
No 81
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.2e-39 Score=345.69 Aligned_cols=262 Identities=24% Similarity=0.295 Sum_probs=191.4
Q ss_pred cceecccCeeEEEEEEeCCCceEEEEEcCCCchhhHHHHHHHHHHHHhc--CCCceeeeEEEEEcC----CcceEEEEee
Q 005226 412 AYVLGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKV--KHPNIVKLRAYYWAP----DEKLLISDFI 485 (707)
Q Consensus 412 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l--~H~niv~l~~~~~~~----~~~~lV~e~~ 485 (707)
.+.||+|+||.||+|... +..||||++..... ..+.+|.+++..+ +||||+++++++... ...++||||+
T Consensus 42 ~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~---~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~ 117 (337)
T 3mdy_A 42 VKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTEE---ASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYH 117 (337)
T ss_dssp EEEEEEETTEEEEEEEET-TEEEEEEEEEGGGH---HHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEEEEEECCC
T ss_pred EeEeecCCCeEEEEEEEC-CceEEEEEEecccc---chhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCceEEEEecc
Confidence 458999999999999984 88999999864332 4455666666654 999999999999887 6789999999
Q ss_pred cCCChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcC-----CCCceecCCCCCCeEEcCCCCeEEeccccccc
Q 005226 486 SNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECS-----PRKFVHGDIKPSNILLDNDFQPYISDFGLSRL 560 (707)
Q Consensus 486 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~-----~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~ 560 (707)
++|+|.++++.. .+++..++.++.|++.||+|||+.. .++|+||||||+||+++.++.+||+|||+++.
T Consensus 118 ~~g~L~~~l~~~------~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg~a~~ 191 (337)
T 3mdy_A 118 ENGSLYDYLKST------TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVK 191 (337)
T ss_dssp TTCBHHHHHHHC------CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEE
T ss_pred CCCcHHHHhhcc------CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEEeCCCcee
Confidence 999999999754 4899999999999999999999820 12999999999999999999999999999976
Q ss_pred ccccCCCCCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCc------hhhHHHHHHHHHHHHhC----------
Q 005226 561 INITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQ------KWDVYSFGVVLLELLTG---------- 624 (707)
Q Consensus 561 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~------~~DV~S~Gv~l~elltg---------- 624 (707)
......... ..+....||+.|+|||++.. ...+. ++|||||||++|||+||
T Consensus 192 ~~~~~~~~~------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~ 258 (337)
T 3mdy_A 192 FISDTNEVD------------IPPNTRVGTKRYMPPEVLDE-SLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEY 258 (337)
T ss_dssp CC---------------------CCSSCSCGGGCCHHHHTT-CCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCC
T ss_pred ecccccccc------------CCCCCCccCcceeChhhccc-ccCCccccCccccchHHHHHHHHHHHhccCcccccccc
Confidence 653322111 11123467999999999765 33333 49999999999999999
Q ss_pred CCCCCCCCCCCCccchhHHHHHHhhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHHh
Q 005226 625 KSPELSPTTSTSIEVPDLVRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLER 704 (707)
Q Consensus 625 ~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~~L~~ 704 (707)
+.||........ ........+.. ... ...+. ...........+.+++.+||+.||++|||+.+|++.|+.
T Consensus 259 ~~p~~~~~~~~~-~~~~~~~~~~~----~~~-~~~~~----~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~ 328 (337)
T 3mdy_A 259 QLPYHDLVPSDP-SYEDMREIVCI----KKL-RPSFP----NRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAK 328 (337)
T ss_dssp CCTTTTTSCSSC-CHHHHHHHHTT----SCC-CCCCC----GGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHH
T ss_pred cccHhhhcCCCC-chhhhHHHHhh----hcc-Ccccc----ccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHH
Confidence 555543322110 11111111110 000 00011 111123456778999999999999999999999999998
Q ss_pred hc
Q 005226 705 IG 706 (707)
Q Consensus 705 i~ 706 (707)
+.
T Consensus 329 l~ 330 (337)
T 3mdy_A 329 MS 330 (337)
T ss_dssp HH
T ss_pred HH
Confidence 74
No 82
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=9.1e-40 Score=338.63 Aligned_cols=249 Identities=26% Similarity=0.404 Sum_probs=200.6
Q ss_pred eecccCeeEEEEEEeC---CCceEEEEEcCCCc-hhhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCcceEEEEeecCCC
Q 005226 414 VLGKSGLGIVYKVVLG---NGIPVAVRRLGEGG-EQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGN 489 (707)
Q Consensus 414 ~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gs 489 (707)
.||+|+||.||+|... ++..||||+++... ....+.+.+|++++++++||||+++++++ ..+..++||||+++|+
T Consensus 17 ~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv~e~~~~~~ 95 (287)
T 1u59_A 17 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGP 95 (287)
T ss_dssp EEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEEEECCTTEE
T ss_pred cccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEEEEeCCCCC
Confidence 7999999999999853 67889999998753 34457899999999999999999999999 5567899999999999
Q ss_pred hHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEecccccccccccCCCCC
Q 005226 490 LANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPS 569 (707)
Q Consensus 490 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~ 569 (707)
|.+++.... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++..........
T Consensus 96 L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~ 168 (287)
T 1u59_A 96 LHKFLVGKR----EEIPVSNVAELLHQVSMGMKYLEE---KNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYT 168 (287)
T ss_dssp HHHHHTTCT----TTSCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCEEC
T ss_pred HHHHHHhCC----ccCCHHHHHHHHHHHHHHHHHHHH---CCEeeCCCchheEEEcCCCCEEECcccceeeeccCcceee
Confidence 999997543 358999999999999999999999 8999999999999999999999999999987643221110
Q ss_pred CCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCCCccchhHHHHHHh
Q 005226 570 SSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTSIEVPDLVRWVKK 648 (707)
Q Consensus 570 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~ 648 (707)
......+|+.|+|||++.. ..++.++||||||+++|||+| |+.||..... ..+...+..
T Consensus 169 -------------~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~ellt~g~~p~~~~~~------~~~~~~i~~ 228 (287)
T 1u59_A 169 -------------ARSAGKWPLKWYAPECINF-RKFSSRSDVWSYGVTMWEALSYGQKPYKKMKG------PEVMAFIEQ 228 (287)
T ss_dssp -------------CCCSSCCCGGGCCHHHHHH-CEECHHHHHHHHHHHHHHHHTTSCCTTTTCCT------HHHHHHHHT
T ss_pred -------------ccccccccccccCHHHhcc-CCCCchhhHHHHHHHHHHHHcCCCCCcccCCH------HHHHHHHhc
Confidence 1122345889999998654 567899999999999999999 9999965322 233333333
Q ss_pred hccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHHhh
Q 005226 649 GFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERI 705 (707)
Q Consensus 649 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~~L~~i 705 (707)
......+ ......+.+++.+||+.||++||++.++++.|+++
T Consensus 229 ~~~~~~~---------------~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~ 270 (287)
T 1u59_A 229 GKRMECP---------------PECPPELYALMSDCWIYKWEDRPDFLTVEQRMRAC 270 (287)
T ss_dssp TCCCCCC---------------TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred CCcCCCC---------------CCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 2211111 12234678999999999999999999999999876
No 83
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=5.6e-40 Score=352.78 Aligned_cols=245 Identities=21% Similarity=0.274 Sum_probs=192.7
Q ss_pred ceecccCeeEEEEEEe-CCCceEEEEEcCCCchhhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCcceEEEEeecCCChH
Q 005226 413 YVLGKSGLGIVYKVVL-GNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLA 491 (707)
Q Consensus 413 ~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL~ 491 (707)
++||+|+||.||+|.. .+|..||+|+++.......+.|.+|++++++++||||+++++++.+.+..++||||+++|+|.
T Consensus 95 ~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~L~ 174 (373)
T 2x4f_A 95 EILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELF 174 (373)
T ss_dssp EECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCEEH
T ss_pred eEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcHH
Confidence 4799999999999996 478999999998776666688999999999999999999999999999999999999999999
Q ss_pred HHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEE--cCCCCeEEecccccccccccCCCCC
Q 005226 492 NALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILL--DNDFQPYISDFGLSRLINITGNNPS 569 (707)
Q Consensus 492 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll--~~~~~~kl~DfGla~~~~~~~~~~~ 569 (707)
+++.... ..+++..+..++.||+.||+|||+ .+|+||||||+|||+ +.++.+||+|||+++........
T Consensus 175 ~~l~~~~----~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~~-- 245 (373)
T 2x4f_A 175 DRIIDES----YNLTELDTILFMKQICEGIRHMHQ---MYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKL-- 245 (373)
T ss_dssp HHHHHTG----GGCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCBC--
T ss_pred HHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCcccc--
Confidence 9997542 358999999999999999999999 899999999999999 56789999999999876432211
Q ss_pred CCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchhHHHHHHhh
Q 005226 570 SSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVRWVKKG 649 (707)
Q Consensus 570 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~ 649 (707)
....||+.|+|||++.. ..++.++|||||||++|||++|+.||..... ......+..
T Consensus 246 ---------------~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~elltg~~pf~~~~~------~~~~~~i~~- 302 (373)
T 2x4f_A 246 ---------------KVNFGTPEFLAPEVVNY-DFVSFPTDMWSVGVIAYMLLSGLSPFLGDND------AETLNNILA- 302 (373)
T ss_dssp ---------------CCCCSSCTTCCHHHHTT-CBCCHHHHHHHHHHHHHHHHHSSCTTCCSSH------HHHHHHHHH-
T ss_pred ---------------ccccCCCcEeChhhccC-CCCCcHHhHHHHHHHHHHHHhCCCCCCCCCH------HHHHHHHHh-
Confidence 12347999999998654 6788999999999999999999999965321 112111111
Q ss_pred ccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 005226 650 FEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSE 700 (707)
Q Consensus 650 ~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~ 700 (707)
..+.+. +. ........+.+++.+|++.||++||++.|+++
T Consensus 303 --~~~~~~---~~------~~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~ 342 (373)
T 2x4f_A 303 --CRWDLE---DE------EFQDISEEAKEFISKLLIKEKSWRISASEALK 342 (373)
T ss_dssp --TCCCSC---SG------GGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred --ccCCCC---hh------hhccCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 111100 00 00122356789999999999999999999986
No 84
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=1.5e-39 Score=349.55 Aligned_cols=243 Identities=22% Similarity=0.319 Sum_probs=194.8
Q ss_pred ceecccCeeEEEEEEeC-CCceEEEEEcCCCc---hhhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCcceEEEEeecCC
Q 005226 413 YVLGKSGLGIVYKVVLG-NGIPVAVRRLGEGG---EQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNG 488 (707)
Q Consensus 413 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~g 488 (707)
+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++++++|||||++++++.+.+..++||||+++|
T Consensus 21 ~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~e~~~gg 100 (384)
T 4fr4_A 21 RAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGG 100 (384)
T ss_dssp EEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCTTE
T ss_pred EEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEecCCCC
Confidence 48999999999999965 67889999986542 223467889999999999999999999999999999999999999
Q ss_pred ChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEecccccccccccCCCC
Q 005226 489 NLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNP 568 (707)
Q Consensus 489 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~ 568 (707)
+|.+++.... .+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++........
T Consensus 101 ~L~~~l~~~~-----~l~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~- 171 (384)
T 4fr4_A 101 DLRYHLQQNV-----HFKEETVKLFICELVMALDYLQN---QRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQI- 171 (384)
T ss_dssp EHHHHHHTTC-----CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTCCB-
T ss_pred cHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHH---CCceeccCcHHHeEECCCCCEEEeccceeeeccCCCce-
Confidence 9999998643 59999999999999999999999 89999999999999999999999999999865422111
Q ss_pred CCCCCCcCCCCCCCCccccccCccccCCCCCCC--CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchhHHHHH
Q 005226 569 SSSGGFMGGALPYMKPVQTEKTNNYRAPEARVP--GNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVRWV 646 (707)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~ 646 (707)
....||+.|+|||++.. +..++.++|||||||++|||++|+.||...... ....+....
T Consensus 172 ----------------~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~---~~~~~~~~~ 232 (384)
T 4fr4_A 172 ----------------TTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSST---SSKEIVHTF 232 (384)
T ss_dssp ----------------CCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTS---CHHHHHHHH
T ss_pred ----------------eccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCc---cHHHHHHHH
Confidence 23457999999999764 345789999999999999999999999754332 111222222
Q ss_pred HhhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCC-hHHHH
Q 005226 647 KKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPR-MKNVS 699 (707)
Q Consensus 647 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs-~~~v~ 699 (707)
.... ..+ .......+.+++.+||+.||.+||+ +++|.
T Consensus 233 ~~~~---~~~-------------p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~ 270 (384)
T 4fr4_A 233 ETTV---VTY-------------PSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQ 270 (384)
T ss_dssp HHCC---CCC-------------CTTSCHHHHHHHHHHSCSSGGGSCCSHHHHH
T ss_pred hhcc---cCC-------------CCcCCHHHHHHHHHHhcCCHhHhcccHHHHH
Confidence 1111 110 0112345789999999999999998 66654
No 85
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=1.2e-39 Score=339.40 Aligned_cols=253 Identities=25% Similarity=0.395 Sum_probs=195.4
Q ss_pred cceecccCeeEEEEEEeCC----CceEEEEEcCCCc-hhhHHHHHHHHHHHHhcCCCceeeeEEEEEc-CCcceEEEEee
Q 005226 412 AYVLGKSGLGIVYKVVLGN----GIPVAVRRLGEGG-EQRHREFVTEVQAIAKVKHPNIVKLRAYYWA-PDEKLLISDFI 485 (707)
Q Consensus 412 ~~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~-~~~~~lV~e~~ 485 (707)
.+.||+|+||+||+|...+ +..+|+|.+.... ....+.+.+|+.++++++||||+++++++.. ++..++||||+
T Consensus 30 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e~~ 109 (298)
T 3f66_A 30 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM 109 (298)
T ss_dssp EEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEEECC
T ss_pred cceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEEEEeCC
Confidence 3489999999999998642 2368999987643 3445789999999999999999999999754 45779999999
Q ss_pred cCCChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEecccccccccccC
Q 005226 486 SNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITG 565 (707)
Q Consensus 486 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~ 565 (707)
++|+|.+++.... ..+++..+..|+.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+++......
T Consensus 110 ~~~~L~~~l~~~~----~~~~~~~~~~i~~ql~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~ 182 (298)
T 3f66_A 110 KHGDLRNFIRNET----HNPTVKDLIGFGLQVAKGMKYLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 182 (298)
T ss_dssp TTCBHHHHHHCTT----CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTCCEEECSCGGGCCCSCGG
T ss_pred CCCCHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCchheEEECCCCCEEECcccccccccccc
Confidence 9999999997643 358999999999999999999999 899999999999999999999999999998664322
Q ss_pred CCCCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCC-CCCCCCCCCCCccchhHHH
Q 005226 566 NNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGK-SPELSPTTSTSIEVPDLVR 644 (707)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~-~P~~~~~~~~~~~~~~~~~ 644 (707)
.... .......+|+.|+|||.+.. ..++.++||||||+++|||++|. +||..... .+...
T Consensus 183 ~~~~------------~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~------~~~~~ 243 (298)
T 3f66_A 183 YYSV------------HNKTGAKLPVKWMALESLQT-QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT------FDITV 243 (298)
T ss_dssp GCBC-----------------CCBCGGGSCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCT------TTHHH
T ss_pred hhcc------------ccccCCCCCccccChHHhcC-CCCChHHHHHHHHHHHHHHHhCCCCCCccCCH------HHHHH
Confidence 1110 01123456788999998654 67889999999999999999954 45543222 12233
Q ss_pred HHHhhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHHhh
Q 005226 645 WVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERI 705 (707)
Q Consensus 645 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~~L~~i 705 (707)
..........+ ......+.+++.+||+.||++||+++++++.|+++
T Consensus 244 ~~~~~~~~~~~---------------~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~ 289 (298)
T 3f66_A 244 YLLQGRRLLQP---------------EYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 289 (298)
T ss_dssp HHHTTCCCCCC---------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHhcCCCCCCC---------------ccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 22222211111 11224578999999999999999999999999986
No 86
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=3.1e-41 Score=352.20 Aligned_cols=260 Identities=22% Similarity=0.321 Sum_probs=182.5
Q ss_pred cceecccCeeEEEEEEeCCCceEEEEEcCCCchhhHHHHHHHHHHHHh--cCCCceeeeEEEEEcCC----cceEEEEee
Q 005226 412 AYVLGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAK--VKHPNIVKLRAYYWAPD----EKLLISDFI 485 (707)
Q Consensus 412 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~H~niv~l~~~~~~~~----~~~lV~e~~ 485 (707)
.+.||+|+||.||+|.. +++.||||++.... ...+.+|.+++.. ++||||+++++++...+ ..++||||+
T Consensus 8 ~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~ 83 (303)
T 3gxj_A 8 QESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYH 83 (303)
T ss_dssp CEEEEECSSSEEEEC-C-TTSCEEEEECC-TT---HHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEEEEEECC
T ss_pred hhhccCCCCeEEEEEEE-cCcceEEEEecccc---hhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeEEEEecc
Confidence 34899999999999987 58899999987543 3567788888887 79999999999998876 679999999
Q ss_pred cCCChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHh--------hcCCCCceecCCCCCCeEEcCCCCeEEecccc
Q 005226 486 SNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLH--------ECSPRKFVHGDIKPSNILLDNDFQPYISDFGL 557 (707)
Q Consensus 486 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH--------~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGl 557 (707)
++|+|.+++... .+++..+..++.|++.||+||| + ++|+||||||+||+++.++.+||+|||+
T Consensus 84 ~~g~L~~~l~~~------~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~---~~ivH~Dlkp~Nil~~~~~~~kl~DFg~ 154 (303)
T 3gxj_A 84 EHGSLFDYLNRY------TVTVEGMIKLALSTASGLAHLHMEIVGTQGK---PAIAHRDLKSKNILVKKNGTCCIADLGL 154 (303)
T ss_dssp TTCCHHHHHHHC------CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCB---C-CCCSCCCGGGC-CCTTCCC-BCCCCC
T ss_pred CCCCHHHHHhcc------CcchHHHHHHHHHHHHHHHHHHHHHhhhccC---CCEeeCcCCHHHeEECCCCCEEEeecCc
Confidence 999999999754 4788899999999999999999 6 8999999999999999999999999999
Q ss_pred cccccccCCCCCCCCCCcCCCCCCCCccccccCccccCCCCCCCCC-----CCCchhhHHHHHHHHHHHHhC--------
Q 005226 558 SRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGN-----RPMQKWDVYSFGVVLLELLTG-------- 624 (707)
Q Consensus 558 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-----~~~~~~DV~S~Gv~l~elltg-------- 624 (707)
++.......... .......||+.|+|||++.... .++.++|||||||++|||+||
T Consensus 155 a~~~~~~~~~~~------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~ 222 (303)
T 3gxj_A 155 AVRHDSATDTID------------IAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHE 222 (303)
T ss_dssp -CCEETTTTEES------------CC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-
T ss_pred ceeccCCCcccc------------cccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccc
Confidence 976653322111 0112346799999999876532 233689999999999999999
Q ss_pred --CCCCCCCCCCCCccchhHHHHHHhhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHHHH
Q 005226 625 --KSPELSPTTSTSIEVPDLVRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENL 702 (707)
Q Consensus 625 --~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~~L 702 (707)
+.||........ ....+...+....... ... ......+....+.+++.+||+.||++|||+++|++.|
T Consensus 223 ~~~~p~~~~~~~~~-~~~~~~~~~~~~~~~~-----~~~----~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L 292 (303)
T 3gxj_A 223 DYQLPYYDLVPSDP-SVEEMRKVVCEQKLRP-----NIP----NRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTL 292 (303)
T ss_dssp CCCCTTTTTCC-CC-CCC-CHHHHTTSCCCC-----CCC----GGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHH
T ss_pred eeeccccccCCCCc-cHHHHHHHHHHhhcCC-----Ccc----ccccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHH
Confidence 566654322110 1111111111110000 000 1111234556789999999999999999999999999
Q ss_pred Hhhc
Q 005226 703 ERIG 706 (707)
Q Consensus 703 ~~i~ 706 (707)
+++.
T Consensus 293 ~~l~ 296 (303)
T 3gxj_A 293 SQLS 296 (303)
T ss_dssp HC-C
T ss_pred HHhh
Confidence 9875
No 87
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=7.5e-40 Score=339.46 Aligned_cols=258 Identities=23% Similarity=0.320 Sum_probs=194.6
Q ss_pred ceecccCeeEEEEEEeCCCceEEEEEcCCCch--hhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCcceEEEEeecCCCh
Q 005226 413 YVLGKSGLGIVYKVVLGNGIPVAVRRLGEGGE--QRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNL 490 (707)
Q Consensus 413 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL 490 (707)
+.||+|+||+||+|...+++.||+|++..... ...+.+.+|++++++++||||+++++++.+++..++||||+++ +|
T Consensus 8 ~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~l 86 (288)
T 1ob3_A 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQ-DL 86 (288)
T ss_dssp EEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEECCSE-EH
T ss_pred hhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEecCC-CH
Confidence 47999999999999998899999999865432 2236788999999999999999999999999999999999975 99
Q ss_pred HHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEecccccccccccCCCCCC
Q 005226 491 ANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSS 570 (707)
Q Consensus 491 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~~ 570 (707)
.+++.... ..+++..+..++.||+.||+|||+ ++|+||||||+||+++.++.+||+|||+++.........
T Consensus 87 ~~~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~-- 157 (288)
T 1ob3_A 87 KKLLDVCE----GGLESVTAKSFLLQLLNGIAYCHD---RRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKY-- 157 (288)
T ss_dssp HHHHHTST----TCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-------
T ss_pred HHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCCEEEeECccccccCcccccc--
Confidence 99998643 358999999999999999999999 899999999999999999999999999998654221110
Q ss_pred CCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchhHHHHHHhhc
Q 005226 571 SGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVRWVKKGF 650 (707)
Q Consensus 571 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~ 650 (707)
....+|+.|+|||++.....++.++|||||||++|||++|+.||..... .+....+....
T Consensus 158 --------------~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~------~~~~~~~~~~~ 217 (288)
T 1ob3_A 158 --------------THEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSE------ADQLMRIFRIL 217 (288)
T ss_dssp ------------------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSH------HHHHHHHHHHH
T ss_pred --------------ccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH------HHHHHHHHHHH
Confidence 2234689999999976656789999999999999999999999965321 11111111111
Q ss_pred cccCC--Cchh-----chHHHHh------hhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 005226 651 EEENP--LSDM-----VDAMLLQ------EVHAKKEVIAVFHLALACTEADPEVRPRMKNVSE 700 (707)
Q Consensus 651 ~~~~~--~~~~-----~d~~l~~------~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~ 700 (707)
..... .... .++.+.. ..........+.+++.+|++.||++|||++|+++
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 280 (288)
T 1ob3_A 218 GTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280 (288)
T ss_dssp CCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CCCChhhchhhhcccccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 10000 0000 0000000 0000122356789999999999999999999975
No 88
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=1.1e-40 Score=375.31 Aligned_cols=249 Identities=27% Similarity=0.454 Sum_probs=201.8
Q ss_pred cceecccCeeEEEEEEeCCCceEEEEEcCCCchhhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCcceEEEEeecCCChH
Q 005226 412 AYVLGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLA 491 (707)
Q Consensus 412 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL~ 491 (707)
.+.||+|+||.||+|.+.++..||||+++..... .++|.+|+++|++++||||+++++++.+ +..++||||+++|+|.
T Consensus 272 ~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~~~~gsL~ 349 (535)
T 2h8h_A 272 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS-PEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLL 349 (535)
T ss_dssp EEEEEECSSEEEEEEEETTTEEEEEEEECTTSSC-HHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCTTEEHH
T ss_pred heecccCCCeEEEEEEECCCceEEEEEeCCCCCC-HHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeehhcCCcHH
Confidence 4589999999999999988888999999865433 3789999999999999999999999866 7789999999999999
Q ss_pred HHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEecccccccccccCCCCCCC
Q 005226 492 NALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSS 571 (707)
Q Consensus 492 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~ 571 (707)
++++... ...+++..++.|+.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++.........
T Consensus 350 ~~l~~~~---~~~l~~~~~~~i~~qi~~~L~~LH~---~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~--- 420 (535)
T 2h8h_A 350 DFLKGET---GKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA--- 420 (535)
T ss_dssp HHHSHHH---HTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHHHT---
T ss_pred HHHhhcC---CCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCCHhhEEEcCCCcEEEcccccceecCCCceec---
Confidence 9997532 1258999999999999999999999 899999999999999999999999999998654211000
Q ss_pred CCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCCCccchhHHHHHHhhc
Q 005226 572 GGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTSIEVPDLVRWVKKGF 650 (707)
Q Consensus 572 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~ 650 (707)
.....++..|+|||++.. ..++.++|||||||++|||+| |+.||.... ..++.+.+....
T Consensus 421 ------------~~~~~~~~~y~aPE~~~~-~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~------~~~~~~~i~~~~ 481 (535)
T 2h8h_A 421 ------------RQGAKFPIKWTAPEAALY-GRFTIKSDVWSFGILLTELTTKGRVPYPGMV------NREVLDQVERGY 481 (535)
T ss_dssp ------------TCSTTSCGGGSCHHHHHH-CCCCHHHHHHHHHHHHHHHTTTTCCSSTTCC------HHHHHHHHHTTC
T ss_pred ------------ccCCcCcccccCHHHhcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCC------HHHHHHHHHcCC
Confidence 012234778999998664 678999999999999999999 899986432 223333333332
Q ss_pred cccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHHhh
Q 005226 651 EEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERI 705 (707)
Q Consensus 651 ~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~~L~~i 705 (707)
+...+ ......+.+++.+||+.||++||++++|++.|+.+
T Consensus 482 ~~~~~---------------~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~ 521 (535)
T 2h8h_A 482 RMPCP---------------PECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY 521 (535)
T ss_dssp CCCCC---------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred CCCCC---------------CCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 22111 12234578999999999999999999999999986
No 89
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=4.9e-40 Score=376.15 Aligned_cols=249 Identities=24% Similarity=0.338 Sum_probs=197.5
Q ss_pred ceecccCeeEEEEEEeC---CCceEEEEEcCCCch--hhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCcceEEEEeecC
Q 005226 413 YVLGKSGLGIVYKVVLG---NGIPVAVRRLGEGGE--QRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISN 487 (707)
Q Consensus 413 ~~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~ 487 (707)
+.||+|+||.||+|.+. .+..||||+++.... ...++|.+|++++++++|||||+++++|. .+..++||||+++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~-~~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEE-SSSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCCEEEEEEccCC
Confidence 47999999999999653 567899999976432 33578999999999999999999999996 4568899999999
Q ss_pred CChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEecccccccccccCCC
Q 005226 488 GNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNN 567 (707)
Q Consensus 488 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~~~ 567 (707)
|+|.+++.... .+++..+..|+.||+.||+|||+ ++||||||||+|||++.++.+||+|||+++........
T Consensus 454 g~L~~~l~~~~-----~l~~~~~~~i~~qi~~~L~yLH~---~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~ 525 (635)
T 4fl3_A 454 GPLNKYLQQNR-----HVKDKNIIELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY 525 (635)
T ss_dssp EEHHHHHHHCT-----TCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC----
T ss_pred CCHHHHHhhCC-----CCCHHHHHHHHHHHHHHHHHHHH---CCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccc
Confidence 99999997543 58999999999999999999999 89999999999999999999999999999876533211
Q ss_pred CCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCCCccchhHHHHH
Q 005226 568 PSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTSIEVPDLVRWV 646 (707)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~ 646 (707)
.. ......+|+.|+|||++.. ..++.++|||||||++|||++ |+.||.... ...+...+
T Consensus 526 ~~-------------~~~~~~~t~~y~APE~~~~-~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~------~~~~~~~i 585 (635)
T 4fl3_A 526 YK-------------AQTHGKWPVKWYAPECINY-YKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK------GSEVTAML 585 (635)
T ss_dssp ----------------------CGGGSCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTTCCSSTTCC------HHHHHHHH
T ss_pred cc-------------cccCCCCceeeeChhhhcC-CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCC------HHHHHHHH
Confidence 11 1122345788999999754 678999999999999999998 999996532 22333333
Q ss_pred HhhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHHhh
Q 005226 647 KKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERI 705 (707)
Q Consensus 647 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~~L~~i 705 (707)
........+ .....++.+++..||+.||++||++.+|++.|+.+
T Consensus 586 ~~~~~~~~p---------------~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~ 629 (635)
T 4fl3_A 586 EKGERMGCP---------------AGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNY 629 (635)
T ss_dssp HTTCCCCCC---------------TTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred HcCCCCCCC---------------CCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence 333222211 12235678999999999999999999999999876
No 90
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=3.3e-39 Score=343.03 Aligned_cols=244 Identities=20% Similarity=0.276 Sum_probs=190.4
Q ss_pred ceecccCeeEEEEEEeC-CCceEEEEEcCCCc---hhhHHHHHHHHHHHHhc-CCCceeeeEEEEEcCCcceEEEEeecC
Q 005226 413 YVLGKSGLGIVYKVVLG-NGIPVAVRRLGEGG---EQRHREFVTEVQAIAKV-KHPNIVKLRAYYWAPDEKLLISDFISN 487 (707)
Q Consensus 413 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lV~e~~~~ 487 (707)
+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|+.++.++ +||||+++++++.+.+..++||||+++
T Consensus 15 ~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~e~~~g 94 (345)
T 3a8x_A 15 RVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 94 (345)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred EEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEEEeCCCC
Confidence 48999999999999975 68899999987542 23346788999999998 899999999999999999999999999
Q ss_pred CChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEecccccccccccCCC
Q 005226 488 GNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNN 567 (707)
Q Consensus 488 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~~~ 567 (707)
|+|.+++.... .+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++........
T Consensus 95 g~L~~~l~~~~-----~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~~~~ 166 (345)
T 3a8x_A 95 GDLMFHMQRQR-----KLPEEHARFYSAEISLALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT 166 (345)
T ss_dssp CBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCTTCC
T ss_pred CcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCHHHEEECCCCCEEEEeccccccccCCCCc
Confidence 99999997543 58999999999999999999999 89999999999999999999999999999754322111
Q ss_pred CCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchhHHHHHH
Q 005226 568 PSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVRWVK 647 (707)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~ 647 (707)
.....||+.|+|||++.. ..++.++|||||||++|||++|+.||........... .....+.
T Consensus 167 ----------------~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~-~~~~~~~ 228 (345)
T 3a8x_A 167 ----------------TSTFCGTPNYIAPEILRG-EDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQ-NTEDYLF 228 (345)
T ss_dssp ----------------BCCCCSCGGGCCHHHHTT-CCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC--------CHHHHH
T ss_pred ----------------ccccCCCccccCccccCC-CCCChHHhHHHHHHHHHHHHhCCCCcCCccccccccc-ccHHHHH
Confidence 123457999999999765 6789999999999999999999999975322111000 0011111
Q ss_pred hhc-cccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCCh
Q 005226 648 KGF-EEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRM 695 (707)
Q Consensus 648 ~~~-~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~ 695 (707)
... .....+ .......+.+++.+||+.||++||++
T Consensus 229 ~~i~~~~~~~-------------p~~~s~~~~~li~~lL~~dP~~R~~~ 264 (345)
T 3a8x_A 229 QVILEKQIRI-------------PRSLSVKAASVLKSFLNKDPKERLGC 264 (345)
T ss_dssp HHHHHCCCCC-------------CTTSCHHHHHHHHHHTCSSTTTSTTC
T ss_pred HHHHcCCCCC-------------CCCCCHHHHHHHHHHhcCCHhHCCCC
Confidence 111 111000 11123457899999999999999996
No 91
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=2.2e-39 Score=355.17 Aligned_cols=246 Identities=22% Similarity=0.248 Sum_probs=195.1
Q ss_pred cceecccCeeEEEEEEe-CCCceEEEEEcCCCc--hhhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCcceEEEEeecCC
Q 005226 412 AYVLGKSGLGIVYKVVL-GNGIPVAVRRLGEGG--EQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNG 488 (707)
Q Consensus 412 ~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~g 488 (707)
.+.||+|+||+||+|.. .+|..+|+|++.... ....+.+.+|++++++++||||+++++++.+++..++||||+++|
T Consensus 16 ~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~E~~~gg 95 (444)
T 3soa_A 16 FEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGG 95 (444)
T ss_dssp EEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEEECCCBCC
T ss_pred EEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEEEEeCCCC
Confidence 45899999999999986 478999999987543 334567899999999999999999999999999999999999999
Q ss_pred ChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEc---CCCCeEEecccccccccccC
Q 005226 489 NLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLD---NDFQPYISDFGLSRLINITG 565 (707)
Q Consensus 489 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~---~~~~~kl~DfGla~~~~~~~ 565 (707)
+|.+++.... .+++..+..++.||+.||+|||+ ++|+||||||+|||++ .++.+||+|||+++......
T Consensus 96 ~L~~~i~~~~-----~~~e~~~~~i~~qil~aL~~lH~---~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~~~ 167 (444)
T 3soa_A 96 ELFEDIVARE-----YYSEADASHCIQQILEAVLHCHQ---MGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQ 167 (444)
T ss_dssp BHHHHHHHCS-----CCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCTTC
T ss_pred CHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEEeccCCCCcEEEccCceeEEecCCC
Confidence 9999998653 59999999999999999999999 8999999999999998 46789999999997654321
Q ss_pred CCCCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchhHHHH
Q 005226 566 NNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVRW 645 (707)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~ 645 (707)
... ....||+.|+|||++.. ..++.++||||+||++|||++|+.||.... ...+...
T Consensus 168 ~~~----------------~~~~gt~~Y~APE~l~~-~~~~~~~DIwSlGvilyell~G~~Pf~~~~------~~~~~~~ 224 (444)
T 3soa_A 168 QAW----------------FGFAGTPGYLSPEVLRK-DPYGKPVDLWACGVILYILLVGYPPFWDED------QHRLYQQ 224 (444)
T ss_dssp CBC----------------CCSCSCGGGCCHHHHTT-CCBCTHHHHHHHHHHHHHHHHSSCSCCCSS------HHHHHHH
T ss_pred cee----------------ecccCCcccCCHHHhcC-CCCCCccccHHHHHHHHHHHhCCCCCCCcc------HHHHHHH
Confidence 110 22457999999999664 678999999999999999999999996432 1222222
Q ss_pred HHhhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 005226 646 VKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSE 700 (707)
Q Consensus 646 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~ 700 (707)
+......... + ........+.+++.+|++.||++|||+.|+++
T Consensus 225 i~~~~~~~~~------~------~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~ 267 (444)
T 3soa_A 225 IKAGAYDFPS------P------EWDTVTPEAKDLINKMLTINPSKRITAAEALK 267 (444)
T ss_dssp HHHTCCCCCT------T------TTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HHhCCCCCCc------c------ccccCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 2222111000 0 00112345789999999999999999999986
No 92
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=5.6e-40 Score=347.17 Aligned_cols=240 Identities=23% Similarity=0.305 Sum_probs=192.2
Q ss_pred ceecccCeeEEEEEEe-CCCceEEEEEcCCCch---hhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCcceEEEEeecCC
Q 005226 413 YVLGKSGLGIVYKVVL-GNGIPVAVRRLGEGGE---QRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNG 488 (707)
Q Consensus 413 ~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~g 488 (707)
+.||+|+||.||+|.. .+++.||||++..... .....+.+|+++++.++||||+++++++.+++..++||||+ +|
T Consensus 15 ~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~E~~-~g 93 (336)
T 3h4j_B 15 ETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVIEYA-GG 93 (336)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCC-CE
T ss_pred EEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEECC-CC
Confidence 4799999999999996 5789999999865321 12357889999999999999999999999999999999999 78
Q ss_pred ChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEecccccccccccCCCC
Q 005226 489 NLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNP 568 (707)
Q Consensus 489 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~ 568 (707)
+|.+++.... .+++..+..++.||+.||+|||+ .+|+||||||+||+++.++.+||+|||+++........
T Consensus 94 ~l~~~l~~~~-----~l~~~~~~~i~~qi~~aL~~LH~---~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~~~- 164 (336)
T 3h4j_B 94 ELFDYIVEKK-----RMTEDEGRRFFQQIICAIEYCHR---HKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFL- 164 (336)
T ss_dssp EHHHHHHHHC-----SCCHHHHHHHHHHHHHHHHHHHH---HTCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSBTT-
T ss_pred cHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCchhhEEEcCCCCEEEEEeccceeccCCccc-
Confidence 9999997543 59999999999999999999999 79999999999999999999999999999865432111
Q ss_pred CCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchhHHHHHHh
Q 005226 569 SSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVRWVKK 648 (707)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~ 648 (707)
....||+.|+|||++.+....++++|||||||++|||++|+.||........... +
T Consensus 165 ----------------~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~------i-- 220 (336)
T 3h4j_B 165 ----------------KTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKK------V-- 220 (336)
T ss_dssp ----------------CCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCBCC------C--
T ss_pred ----------------ccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHHHH------H--
Confidence 2235799999999977644447899999999999999999999975432211100 0
Q ss_pred hccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 005226 649 GFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSE 700 (707)
Q Consensus 649 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~ 700 (707)
........ ......+.+++.+|++.||.+|||++|+++
T Consensus 221 -~~~~~~~p-------------~~~s~~~~~li~~~L~~dP~~Rpt~~eil~ 258 (336)
T 3h4j_B 221 -NSCVYVMP-------------DFLSPGAQSLIRRMIVADPMQRITIQEIRR 258 (336)
T ss_dssp -CSSCCCCC-------------TTSCHHHHHHHHTTSCSSGGGSCCHHHHTT
T ss_pred -HcCCCCCc-------------ccCCHHHHHHHHHHcCCChhHCcCHHHHHh
Confidence 00000001 112245678999999999999999999875
No 93
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.3e-39 Score=344.96 Aligned_cols=252 Identities=27% Similarity=0.495 Sum_probs=195.1
Q ss_pred cceecccCeeEEEEEEeCC-----CceEEEEEcCCCc-hhhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCcceEEEEee
Q 005226 412 AYVLGKSGLGIVYKVVLGN-----GIPVAVRRLGEGG-EQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFI 485 (707)
Q Consensus 412 ~~~lG~G~~g~Vy~~~~~~-----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~ 485 (707)
.+.||+|+||.||+|.... +..||||++.... ......|.+|++++++++||||+++++++...+..++||||+
T Consensus 49 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 128 (333)
T 1mqb_A 49 QKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYM 128 (333)
T ss_dssp EEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred ccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEEEEeCC
Confidence 3589999999999998642 3469999987653 334467999999999999999999999999999999999999
Q ss_pred cCCChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEecccccccccccC
Q 005226 486 SNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITG 565 (707)
Q Consensus 486 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~ 565 (707)
++|+|.+++.... ..+++..++.++.||+.||+|||+ .+|+||||||+||+++.++.+||+|||+++......
T Consensus 129 ~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 201 (333)
T 1mqb_A 129 ENGALDKFLREKD----GEFSVLQLVGMLRGIAAGMKYLAN---MNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDP 201 (333)
T ss_dssp TTEEHHHHHHHTT----TCSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCCCC--------
T ss_pred CCCcHHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChheEEECCCCcEEECCCCcchhhcccc
Confidence 9999999997643 358999999999999999999999 899999999999999999999999999998765322
Q ss_pred CCCCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCCCccchhHHH
Q 005226 566 NNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTSIEVPDLVR 644 (707)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~ellt-g~~P~~~~~~~~~~~~~~~~~ 644 (707)
.... ......+|..|+|||++.. ..++.++||||||+++|||++ |+.||.... ...+..
T Consensus 202 ~~~~-------------~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~ellt~g~~pf~~~~------~~~~~~ 261 (333)
T 1mqb_A 202 EATY-------------TTSGGKIPIRWTAPEAISY-RKFTSASDVWSFGIVMWEVMTYGERPYWELS------NHEVMK 261 (333)
T ss_dssp ----------------------CCCGGGSCHHHHHS-CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC------HHHHHH
T ss_pred cccc-------------ccCCCCccccccCchhccc-CCCCchhhhHHHHHHHHHHHcCCCCCcccCC------HHHHHH
Confidence 1110 0012334778999998654 678899999999999999999 999986432 122333
Q ss_pred HHHhhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHHhh
Q 005226 645 WVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERI 705 (707)
Q Consensus 645 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~~L~~i 705 (707)
.+........+ ......+.+++.+||+.||++||++.++++.|+++
T Consensus 262 ~~~~~~~~~~~---------------~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~ 307 (333)
T 1mqb_A 262 AINDGFRLPTP---------------MDCPSAIYQLMMQCWQQERARRPKFADIVSILDKL 307 (333)
T ss_dssp HHHTTCCCCCC---------------TTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred HHHCCCcCCCc---------------ccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 33222111111 12234578999999999999999999999999876
No 94
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=9.1e-40 Score=340.54 Aligned_cols=243 Identities=24% Similarity=0.306 Sum_probs=186.8
Q ss_pred ceecccCeeEEEEEEeC-CCceEEEEEcCCCch--------------------------hhHHHHHHHHHHHHhcCCCce
Q 005226 413 YVLGKSGLGIVYKVVLG-NGIPVAVRRLGEGGE--------------------------QRHREFVTEVQAIAKVKHPNI 465 (707)
Q Consensus 413 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--------------------------~~~~~~~~E~~~l~~l~H~ni 465 (707)
+.||+|+||.||+|... +++.||||++..... ...+.+.+|++++++++||||
T Consensus 19 ~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i 98 (298)
T 2zv2_A 19 DEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKKLDHPNV 98 (298)
T ss_dssp EEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHTCCCTTB
T ss_pred eEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHhCCCCCC
Confidence 47999999999999964 688999999865421 113568899999999999999
Q ss_pred eeeEEEEEc--CCcceEEEEeecCCChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeE
Q 005226 466 VKLRAYYWA--PDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNIL 543 (707)
Q Consensus 466 v~l~~~~~~--~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIl 543 (707)
+++++++.+ .+..++||||+++|+|.+++.. ..+++..+..++.||+.||+|||+ .+|+||||||+||+
T Consensus 99 v~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~------~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~Nil 169 (298)
T 2zv2_A 99 VKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL------KPLSEDQARFYFQDLIKGIEYLHY---QKIIHRDIKPSNLL 169 (298)
T ss_dssp CCEEEEEECSSSSEEEEEEECCTTCBSCCSSCS------SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEE
T ss_pred CeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhc------CCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHEE
Confidence 999999987 4578999999999999887543 259999999999999999999999 89999999999999
Q ss_pred EcCCCCeEEecccccccccccCCCCCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCC--CCchhhHHHHHHHHHHH
Q 005226 544 LDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNR--PMQKWDVYSFGVVLLEL 621 (707)
Q Consensus 544 l~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~--~~~~~DV~S~Gv~l~el 621 (707)
++.++.+||+|||+++........ .....||+.|+|||.+..... ++.++|||||||++|||
T Consensus 170 ~~~~~~~kl~Dfg~~~~~~~~~~~----------------~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l 233 (298)
T 2zv2_A 170 VGEDGHIKIADFGVSNEFKGSDAL----------------LSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCF 233 (298)
T ss_dssp ECTTSCEEECCCTTCEECSSSSCE----------------ECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHH
T ss_pred ECCCCCEEEecCCCcccccccccc----------------ccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHH
Confidence 999999999999999866432110 022357999999999765332 47889999999999999
Q ss_pred HhCCCCCCCCCCCCCccchhHHHHHHhhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 005226 622 LTGKSPELSPTTSTSIEVPDLVRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSE 700 (707)
Q Consensus 622 ltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~ 700 (707)
++|+.||.... ...+...+....... + . .......+.+++.+||+.||++||++.|+++
T Consensus 234 ~~g~~pf~~~~------~~~~~~~~~~~~~~~-~--~-----------~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~ 292 (298)
T 2zv2_A 234 VFGQCPFMDER------IMCLHSKIKSQALEF-P--D-----------QPDIAEDLKDLITRMLDKNPESRIVVPEIKL 292 (298)
T ss_dssp HHSSCSSCCSS------HHHHHHHHHHCCCCC-C--S-----------SSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred HHCCCCCCCcc------HHHHHHHHhcccCCC-C--C-----------ccccCHHHHHHHHHHhhcChhhCCCHHHHhc
Confidence 99999996421 112222221111000 0 0 0112345789999999999999999999874
No 95
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=1.2e-39 Score=344.73 Aligned_cols=256 Identities=22% Similarity=0.337 Sum_probs=191.7
Q ss_pred cceecccCeeEEEEEEeC-CCceEEEEEcCCCc-hhhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCc------------
Q 005226 412 AYVLGKSGLGIVYKVVLG-NGIPVAVRRLGEGG-EQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDE------------ 477 (707)
Q Consensus 412 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~------------ 477 (707)
.+.||+|+||.||+|... +++.||||++.... ....+.+.+|++++++++||||+++++++.+.+.
T Consensus 11 ~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~~~~~ 90 (332)
T 3qd2_B 11 IQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEMDEIWL 90 (332)
T ss_dssp EEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHHHHC---
T ss_pred eeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhhhhhhhh
Confidence 347999999999999976 78999999987543 3345789999999999999999999999866542
Q ss_pred ---------------------------------------------ceEEEEeecCCChHHHHhCCCCCCCCCCCHHHHHH
Q 005226 478 ---------------------------------------------KLLISDFISNGNLANALRGRNGQPSTSLSWSTRLR 512 (707)
Q Consensus 478 ---------------------------------------------~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~ 512 (707)
.++||||+++|+|.+++..... ....++..++.
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~ 168 (332)
T 3qd2_B 91 KDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCS--LEDREHGVCLH 168 (332)
T ss_dssp -----------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCS--GGGSCHHHHHH
T ss_pred ccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccC--ccchhhHHHHH
Confidence 6899999999999999987542 34568888999
Q ss_pred HHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEecccccccccccCCCCCCCCCCcCCCCCCCCccccccCcc
Q 005226 513 IAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNN 592 (707)
Q Consensus 513 i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~ 592 (707)
++.||+.||+|||+ ++|+||||||+||+++.++.+||+|||+++............ .....+.......||+.
T Consensus 169 i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~----~~~~~~~~~~~~~gt~~ 241 (332)
T 3qd2_B 169 IFIQIAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVL----TPMPAYATHTGQVGTKL 241 (332)
T ss_dssp HHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC------------------CCCSCC-CGG
T ss_pred HHHHHHHHHHHHHh---CCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhcccc----ccccccccccccCCCcC
Confidence 99999999999999 899999999999999999999999999998775432211100 00001112234568999
Q ss_pred ccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchhHHHHHHhhccccCCCchhchHHHHhhhhhHH
Q 005226 593 YRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVRWVKKGFEEENPLSDMVDAMLLQEVHAKK 672 (707)
Q Consensus 593 y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 672 (707)
|+|||++.. ..++.++|||||||++|||++|..|+.. ......... ....+ . ....
T Consensus 242 y~aPE~~~~-~~~~~~~Di~slG~il~el~~~~~~~~~--------~~~~~~~~~---~~~~~------~------~~~~ 297 (332)
T 3qd2_B 242 YMSPEQIHG-NNYSHKVDIFSLGLILFELLYSFSTQME--------RVRIITDVR---NLKFP------L------LFTQ 297 (332)
T ss_dssp GSCHHHHHC-CCCCTHHHHHHHHHHHHHHHSCCCCHHH--------HHHHHHHHH---TTCCC------H------HHHH
T ss_pred ccChHHhcC-CCCcchhhHHHHHHHHHHHHHcCCChhH--------HHHHHHHhh---ccCCC------c------cccc
Confidence 999999765 6789999999999999999998766421 111111111 11110 0 1122
Q ss_pred HHHHHHHHHHhccCCCCCCCCChHHHHH
Q 005226 673 EVIAVFHLALACTEADPEVRPRMKNVSE 700 (707)
Q Consensus 673 ~~~~l~~l~~~Cl~~dP~~RPs~~~v~~ 700 (707)
....+.+++.+||+.||++||+++|+++
T Consensus 298 ~~~~~~~li~~~l~~~p~~Rps~~~~l~ 325 (332)
T 3qd2_B 298 KYPQEHMMVQDMLSPSPTERPEATDIIE 325 (332)
T ss_dssp HCHHHHHHHHHHHCSSGGGSCCHHHHHH
T ss_pred CChhHHHHHHHHccCCCCcCCCHHHHhh
Confidence 3345688999999999999999999986
No 96
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=1.1e-39 Score=336.95 Aligned_cols=249 Identities=27% Similarity=0.366 Sum_probs=196.1
Q ss_pred cceecccCeeEEEEEEeCC----CceEEEEEcCCC-chhhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCcceEEEEeec
Q 005226 412 AYVLGKSGLGIVYKVVLGN----GIPVAVRRLGEG-GEQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFIS 486 (707)
Q Consensus 412 ~~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~ 486 (707)
.+.||+|+||.||+|...+ +..||+|.+... .....+.|.+|++++++++||||+++++++.+ +..++||||++
T Consensus 17 ~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~~~ 95 (281)
T 3cc6_A 17 NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTWIIMELYP 95 (281)
T ss_dssp EEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCEEEEECCT
T ss_pred EEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCEEEEecCC
Confidence 3489999999999998542 346999998765 33445789999999999999999999999764 56799999999
Q ss_pred CCChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEecccccccccccCC
Q 005226 487 NGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGN 566 (707)
Q Consensus 487 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~~ 566 (707)
+|+|.+++.... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++.......
T Consensus 96 ~~~L~~~l~~~~----~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 168 (281)
T 3cc6_A 96 YGELGHYLERNK----NSLKVLTLVLYSLQICKAMAYLES---INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDY 168 (281)
T ss_dssp TCBHHHHHHHHT----TTCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEEEETTEEEECCCCGGGCC-----
T ss_pred CCCHHHHHHhcc----ccCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCccceEEECCCCcEEeCccCCCcccccccc
Confidence 999999997543 358999999999999999999999 8999999999999999999999999999986643221
Q ss_pred CCCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCCCccchhHHHH
Q 005226 567 NPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTSIEVPDLVRW 645 (707)
Q Consensus 567 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~ 645 (707)
.. .....++..|+|||.+.. ..++.++||||||+++|||+| |+.||..... ......
T Consensus 169 ~~---------------~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~llt~g~~p~~~~~~------~~~~~~ 226 (281)
T 3cc6_A 169 YK---------------ASVTRLPIKWMSPESINF-RRFTTASDVWMFAVCMWEILSFGKQPFFWLEN------KDVIGV 226 (281)
T ss_dssp -------------------CCCCCGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCG------GGHHHH
T ss_pred cc---------------cccCCCCcceeCchhhcc-CCCCchhccHHHHHHHHHHHhCCCCCcccCCh------HHHHHH
Confidence 11 122345788999998654 678899999999999999998 9999964322 223333
Q ss_pred HHhhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHHhh
Q 005226 646 VKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERI 705 (707)
Q Consensus 646 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~~L~~i 705 (707)
+........ . ......+.+++.+||+.||++||++.++++.|+++
T Consensus 227 ~~~~~~~~~--~-------------~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~ 271 (281)
T 3cc6_A 227 LEKGDRLPK--P-------------DLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDV 271 (281)
T ss_dssp HHHTCCCCC--C-------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HhcCCCCCC--C-------------CCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHH
Confidence 322211111 1 11224578999999999999999999999999886
No 97
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=1.5e-39 Score=343.23 Aligned_cols=249 Identities=24% Similarity=0.325 Sum_probs=178.1
Q ss_pred ceecccCeeEEEEEEeC-CCceEEEEEcCCCchhhHHHHHHHHHHHHhcC-CCceeeeEEEEEcCCcceEEEEeecCCCh
Q 005226 413 YVLGKSGLGIVYKVVLG-NGIPVAVRRLGEGGEQRHREFVTEVQAIAKVK-HPNIVKLRAYYWAPDEKLLISDFISNGNL 490 (707)
Q Consensus 413 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~lV~e~~~~gsL 490 (707)
+.||+|+||+||+|... +++.||||++... ....+.+|+.++++++ ||||+++++++.+++..++||||+++|+|
T Consensus 17 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 93 (325)
T 3kn6_A 17 KPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGEL 93 (325)
T ss_dssp CCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCBH
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCcH
Confidence 57999999999999975 6899999998653 2356788999999996 99999999999999999999999999999
Q ss_pred HHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCC---CeEEecccccccccccCCC
Q 005226 491 ANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDF---QPYISDFGLSRLINITGNN 567 (707)
Q Consensus 491 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~---~~kl~DfGla~~~~~~~~~ 567 (707)
.+++.... .+++..+..|+.||+.||+|||+ ++|+||||||+||+++.++ .+||+|||+++........
T Consensus 94 ~~~l~~~~-----~~~~~~~~~i~~qi~~~l~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~ 165 (325)
T 3kn6_A 94 FERIKKKK-----HFSETEASYIMRKLVSAVSHMHD---VGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQP 165 (325)
T ss_dssp HHHHHHCS-----CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC----
T ss_pred HHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHH---CCCeecCCCHHHEEEecCCCcccEEEeccccceecCCCCCc
Confidence 99998653 69999999999999999999999 8999999999999998765 8999999999865422111
Q ss_pred CCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchhHHHHHH
Q 005226 568 PSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVRWVK 647 (707)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~ 647 (707)
. ....||+.|+|||++.. ..++.++|||||||++|||++|+.||........ .....+...
T Consensus 166 ~----------------~~~~~t~~y~aPE~~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~--~~~~~~~~~ 226 (325)
T 3kn6_A 166 L----------------KTPCFTLHYAAPELLNQ-NGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLT--CTSAVEIMK 226 (325)
T ss_dssp -----------------------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC---------CCCHHHHHH
T ss_pred c----------------cccCCCcCccCHHHhcC-CCCCCccchHHHHHHHHHHHhCCCCCCCCccccc--cccHHHHHH
Confidence 1 22356899999999764 6789999999999999999999999976433211 111111111
Q ss_pred hhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 005226 648 KGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSE 700 (707)
Q Consensus 648 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~ 700 (707)
........ ..... ......++.+++.+|++.||++|||++++++
T Consensus 227 ~i~~~~~~---~~~~~------~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~ 270 (325)
T 3kn6_A 227 KIKKGDFS---FEGEA------WKNVSQEAKDLIQGLLTVDPNKRLKMSGLRY 270 (325)
T ss_dssp HHTTTCCC---CCSHH------HHTSCHHHHHHHHHHHCCCTTTCCCTTTSTT
T ss_pred HHHcCCCC---CCccc------ccCCCHHHHHHHHHHCCCChhHCCCHHHHhc
Confidence 11111111 00000 1123456789999999999999999998863
No 98
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=1.4e-39 Score=347.25 Aligned_cols=249 Identities=20% Similarity=0.268 Sum_probs=194.6
Q ss_pred cceecccCeeEEEEEEeC-CCceEEEEEcCCCc-----hhhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCcceEEEEee
Q 005226 412 AYVLGKSGLGIVYKVVLG-NGIPVAVRRLGEGG-----EQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFI 485 (707)
Q Consensus 412 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~ 485 (707)
.+.||+|+||+||+|... +++.||||++.... ....+.+.+|++++++++||||+++++++.+++..++||||+
T Consensus 29 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~ 108 (351)
T 3c0i_A 29 CEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFM 108 (351)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred eeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEeCC
Confidence 458999999999999864 68999999985421 113477899999999999999999999999999999999999
Q ss_pred cCCChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCC---eEEeccccccccc
Q 005226 486 SNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQ---PYISDFGLSRLIN 562 (707)
Q Consensus 486 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~---~kl~DfGla~~~~ 562 (707)
++|+|.+++.... .....+++..+..++.||+.||+|||+ ++|+||||||+|||++.++. +||+|||+++...
T Consensus 109 ~g~~L~~~l~~~~-~~~~~~~~~~~~~i~~qi~~al~~lH~---~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~~~ 184 (351)
T 3c0i_A 109 DGADLCFEIVKRA-DAGFVYSEAVASHYMRQILEALRYCHD---NNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLG 184 (351)
T ss_dssp SSCBHHHHHHHHH-HTTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECSSSTTCCEEECCCTTCEECC
T ss_pred CCCCHHHHHHHhc-ccCCCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCChHHeEEecCCCCCcEEEecCcceeEec
Confidence 9999998886432 112358999999999999999999999 89999999999999987654 9999999998765
Q ss_pred ccCCCCCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchhH
Q 005226 563 ITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDL 642 (707)
Q Consensus 563 ~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~ 642 (707)
...... ....||+.|+|||++.. ..++.++|||||||++|||++|+.||... ...+
T Consensus 185 ~~~~~~----------------~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~-------~~~~ 240 (351)
T 3c0i_A 185 ESGLVA----------------GGRVGTPHFMAPEVVKR-EPYGKPVDVWGCGVILFILLSGCLPFYGT-------KERL 240 (351)
T ss_dssp TTSCBC----------------CCCCSCGGGCCHHHHTT-CCBCTHHHHHHHHHHHHHHHHSSCSSCSS-------HHHH
T ss_pred CCCeee----------------cCCcCCcCccCHHHHcC-CCCCchHhhHHHHHHHHHHHHCCCCCCCc-------HHHH
Confidence 322110 23457999999999765 66789999999999999999999999642 1122
Q ss_pred HHHHHhhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 005226 643 VRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSE 700 (707)
Q Consensus 643 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~ 700 (707)
...+... ... .++.. .......+.+++.+||+.||++|||+.++++
T Consensus 241 ~~~i~~~---~~~----~~~~~-----~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 286 (351)
T 3c0i_A 241 FEGIIKG---KYK----MNPRQ-----WSHISESAKDLVRRMLMLDPAERITVYEALN 286 (351)
T ss_dssp HHHHHHT---CCC----CCHHH-----HTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHHHHcC---CCC----CCccc-----cccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 2211111 100 00000 0112356789999999999999999999975
No 99
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=1.4e-39 Score=344.82 Aligned_cols=257 Identities=25% Similarity=0.402 Sum_probs=201.8
Q ss_pred cceecccCeeEEEEEEeCC-C-----ceEEEEEcCCCc-hhhHHHHHHHHHHHHhc-CCCceeeeEEEEEcCCcceEEEE
Q 005226 412 AYVLGKSGLGIVYKVVLGN-G-----IPVAVRRLGEGG-EQRHREFVTEVQAIAKV-KHPNIVKLRAYYWAPDEKLLISD 483 (707)
Q Consensus 412 ~~~lG~G~~g~Vy~~~~~~-~-----~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lV~e 483 (707)
.+.||+|+||.||+|.... + ..||+|.+.... ....+.+.+|+++++++ +||||+++++++..++..++|||
T Consensus 51 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e 130 (333)
T 2i1m_A 51 GKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITE 130 (333)
T ss_dssp EEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred eeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCCceEEEEe
Confidence 4589999999999999642 2 479999987653 33457799999999999 89999999999999999999999
Q ss_pred eecCCChHHHHhCCCC---------CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEec
Q 005226 484 FISNGNLANALRGRNG---------QPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISD 554 (707)
Q Consensus 484 ~~~~gsL~~~l~~~~~---------~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~D 554 (707)
|+++|+|.+++..... .....+++..++.++.||+.||+|||+ .+|+||||||+||+++.++.+||+|
T Consensus 131 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~NIl~~~~~~~kl~D 207 (333)
T 2i1m_A 131 YCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLAS---KNCIHRDVAARNVLLTNGHVAKIGD 207 (333)
T ss_dssp CCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGCEEEGGGEEEBCC
T ss_pred cCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhc---CCcccCCcccceEEECCCCeEEECc
Confidence 9999999999975321 012358999999999999999999999 8999999999999999999999999
Q ss_pred ccccccccccCCCCCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCC
Q 005226 555 FGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTT 633 (707)
Q Consensus 555 fGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~ellt-g~~P~~~~~~ 633 (707)
||+++......... ......+|..|+|||.+.. ..++.++||||||+++|||+| |..||.....
T Consensus 208 fg~~~~~~~~~~~~--------------~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~el~t~g~~p~~~~~~ 272 (333)
T 2i1m_A 208 FGLARDIMNDSNYI--------------VKGNARLPVKWMAPESIFD-CVYTVQSDVWSYGILLWEIFSLGLNPYPGILV 272 (333)
T ss_dssp CGGGCCGGGCTTSE--------------ECSSCEECGGGSCHHHHHH-CCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCS
T ss_pred ccccccccccccee--------------ecCCCCCCccccCHHHhcc-CCCChHHHHHHHHHHHHHHHcCCCCCCcccch
Confidence 99998664322110 0122345788999998664 678899999999999999999 8999865332
Q ss_pred CCCccchhHHHHHHhhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHHhhc
Q 005226 634 STSIEVPDLVRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERIG 706 (707)
Q Consensus 634 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~~L~~i~ 706 (707)
. ..+...+........+ ......+.+++.+||+.||.+||++.+|++.|+++.
T Consensus 273 ~-----~~~~~~~~~~~~~~~~---------------~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~ 325 (333)
T 2i1m_A 273 N-----SKFYKLVKDGYQMAQP---------------AFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQA 325 (333)
T ss_dssp S-----HHHHHHHHHTCCCCCC---------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred h-----HHHHHHHhcCCCCCCC---------------CCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHH
Confidence 1 1222333322221111 112345788999999999999999999999998763
No 100
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=9.8e-40 Score=349.58 Aligned_cols=246 Identities=24% Similarity=0.322 Sum_probs=186.4
Q ss_pred ceecccCeeEEEEEEeC-CCceEEEEEcCCCchhhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCcceEEEEeecCCChH
Q 005226 413 YVLGKSGLGIVYKVVLG-NGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLA 491 (707)
Q Consensus 413 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL~ 491 (707)
+.||+|+||+||++... +++.||||++....... +.+.+|+.++++++||||+++++++.+++..++||||+++|+|.
T Consensus 26 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~~L~ 104 (361)
T 3uc3_A 26 KDIGSGNFGVARLMRDKLTKELVAVKYIERGAAID-ENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASGGELY 104 (361)
T ss_dssp EEESSSTTSSEEEEEETTTCCEEEEEEEESSTTSC-HHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCCSCBHH
T ss_pred EEeccCCCEEEEEEEECCCCcEEEEEEEecCcccc-HHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEeCCCCCHH
Confidence 47999999999999975 78999999997654333 67889999999999999999999999999999999999999999
Q ss_pred HHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCC--eEEecccccccccccCCCCC
Q 005226 492 NALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQ--PYISDFGLSRLINITGNNPS 569 (707)
Q Consensus 492 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~--~kl~DfGla~~~~~~~~~~~ 569 (707)
+++.... .+++..+..++.|++.||+|||+ ++|+||||||+||+++.++. +||+|||+++.......
T Consensus 105 ~~l~~~~-----~~~~~~~~~i~~ql~~~L~~LH~---~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~~--- 173 (361)
T 3uc3_A 105 ERICNAG-----RFSEDEARFFFQQLLSGVSYCHS---MQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQ--- 173 (361)
T ss_dssp HHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHH---TTCCSCCCCGGGEEECSSSSCCEEECCCCCC-----------
T ss_pred HHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEcCCCCceEEEeecCccccccccCC---
Confidence 9997543 59999999999999999999999 89999999999999987765 99999999874332111
Q ss_pred CCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchhHHHHHHhh
Q 005226 570 SSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVRWVKKG 649 (707)
Q Consensus 570 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~ 649 (707)
.....||+.|+|||++......+.++|||||||++|||++|+.||....... .+.......
T Consensus 174 --------------~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~-----~~~~~~~~~ 234 (361)
T 3uc3_A 174 --------------PKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPR-----DYRKTIQRI 234 (361)
T ss_dssp ---------------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CC-----CHHHHHHHH
T ss_pred --------------CCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHH-----HHHHHHHHH
Confidence 1234579999999997664444455999999999999999999997543321 122222221
Q ss_pred ccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 005226 650 FEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSE 700 (707)
Q Consensus 650 ~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~ 700 (707)
......+.. .......+.+++.+||+.||++|||+.|+++
T Consensus 235 ~~~~~~~~~-----------~~~~s~~~~~li~~~L~~dP~~Rps~~ell~ 274 (361)
T 3uc3_A 235 LSVKYSIPD-----------DIRISPECCHLISRIFVADPATRISIPEIKT 274 (361)
T ss_dssp HTTCCCCCT-----------TSCCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred hcCCCCCCC-----------cCCCCHHHHHHHHHHccCChhHCcCHHHHHh
Confidence 111111000 0012245679999999999999999999975
No 101
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=2.5e-39 Score=336.23 Aligned_cols=259 Identities=20% Similarity=0.253 Sum_probs=193.9
Q ss_pred ceecccCeeEEEEEEeC-CCceEEEEEcCCCc--hhhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCcceEEEEeecCCC
Q 005226 413 YVLGKSGLGIVYKVVLG-NGIPVAVRRLGEGG--EQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGN 489 (707)
Q Consensus 413 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gs 489 (707)
+.||+|+||+||+|... +++.||||++.... ......+.+|++++++++||||+++++++.+++..++||||+++ +
T Consensus 8 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~ 86 (292)
T 3o0g_A 8 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQ-D 86 (292)
T ss_dssp EEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCSE-E
T ss_pred eEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEecCCC-C
Confidence 47999999999999975 68899999986543 23347788999999999999999999999999999999999975 6
Q ss_pred hHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEecccccccccccCCCCC
Q 005226 490 LANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPS 569 (707)
Q Consensus 490 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~ 569 (707)
+.+.+.... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++.........
T Consensus 87 l~~~~~~~~----~~l~~~~~~~~~~ql~~~l~~lH~---~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~- 158 (292)
T 3o0g_A 87 LKKYFDSCN----GDLDPEIVKSFLFQLLKGLGFCHS---RNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCY- 158 (292)
T ss_dssp HHHHHHHTT----TCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECCSCCSCC-
T ss_pred HHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEeecccceecCCccccc-
Confidence 666665432 359999999999999999999999 899999999999999999999999999998664221111
Q ss_pred CCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchhHHHHHHhh
Q 005226 570 SSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVRWVKKG 649 (707)
Q Consensus 570 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~ 649 (707)
....||+.|+|||++.....++.++|||||||++|||++|+.|+..... ..+....+...
T Consensus 159 ---------------~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~-----~~~~~~~i~~~ 218 (292)
T 3o0g_A 159 ---------------SAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGND-----VDDQLKRIFRL 218 (292)
T ss_dssp ---------------CSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSS-----HHHHHHHHHHH
T ss_pred ---------------cCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCC-----HHHHHHHHHHH
Confidence 2345689999999977655689999999999999999999998653221 11222222221
Q ss_pred ccccCC--Cchhch-----------HHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 005226 650 FEEENP--LSDMVD-----------AMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSE 700 (707)
Q Consensus 650 ~~~~~~--~~~~~d-----------~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~ 700 (707)
...... ...+.+ ...............+.+++.+|++.||++|||++|+++
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 282 (292)
T 3o0g_A 219 LGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282 (292)
T ss_dssp HCCCCTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred hCCCChhhhhhhcccccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc
Confidence 111000 000000 000000000123356789999999999999999999985
No 102
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=2.5e-39 Score=350.47 Aligned_cols=205 Identities=24% Similarity=0.304 Sum_probs=172.1
Q ss_pred ceeccc--CeeEEEEEEeC-CCceEEEEEcCCCc--hhhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCcceEEEEeecC
Q 005226 413 YVLGKS--GLGIVYKVVLG-NGIPVAVRRLGEGG--EQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISN 487 (707)
Q Consensus 413 ~~lG~G--~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~ 487 (707)
+.||+| +||.||+|... +++.||||++.... ....+.+.+|++++++++|||||++++++.+++..++||||+++
T Consensus 31 ~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 110 (389)
T 3gni_B 31 TVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAY 110 (389)
T ss_dssp EEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTT
T ss_pred ecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEEEEEccCC
Confidence 389999 99999999975 78999999987543 33456788999999999999999999999999999999999999
Q ss_pred CChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEecccccccccccCCC
Q 005226 488 GNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNN 567 (707)
Q Consensus 488 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~~~ 567 (707)
|+|.+++.... ...+++..+..|+.||+.||+|||+ .+|+||||||+|||++.++.+||+|||.+.........
T Consensus 111 ~~L~~~l~~~~---~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~~~~~ 184 (389)
T 3gni_B 111 GSAKDLICTHF---MDGMNELAIAYILQGVLKALDYIHH---MGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQR 184 (389)
T ss_dssp CBHHHHHHHTC---TTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCGGGCEECEETTEE
T ss_pred CCHHHHHhhhc---ccCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEcccccceeecccccc
Confidence 99999997653 2359999999999999999999999 89999999999999999999999999998765432211
Q ss_pred CCCCCCCcCCCCCCCCccccccCccccCCCCCCCC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q 005226 568 PSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPG-NRPMQKWDVYSFGVVLLELLTGKSPELSPT 632 (707)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~~DV~S~Gv~l~elltg~~P~~~~~ 632 (707)
... ....+....||..|+|||++... ..++.++|||||||++|||++|+.||....
T Consensus 185 ~~~---------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~ 241 (389)
T 3gni_B 185 QRV---------VHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMP 241 (389)
T ss_dssp CSC---------BCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCC
T ss_pred ccc---------cccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCC
Confidence 110 00112334678999999997653 568899999999999999999999997643
No 103
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=7.8e-40 Score=341.55 Aligned_cols=264 Identities=25% Similarity=0.372 Sum_probs=196.5
Q ss_pred ceecccCeeEEEEEEe-----CCCceEEEEEcCCCc-hhhHHHHHHHHHHHHhcCCCceeeeEEEEEcC--CcceEEEEe
Q 005226 413 YVLGKSGLGIVYKVVL-----GNGIPVAVRRLGEGG-EQRHREFVTEVQAIAKVKHPNIVKLRAYYWAP--DEKLLISDF 484 (707)
Q Consensus 413 ~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~~~lV~e~ 484 (707)
+.||+|+||.||+|.+ .+++.||||++.... ....+.+.+|++++++++||||+++++++... ...++||||
T Consensus 27 ~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~ 106 (302)
T 4e5w_A 27 RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEF 106 (302)
T ss_dssp EEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCEEEEEEC
T ss_pred hccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceEEEEEEe
Confidence 4799999999999983 468999999987543 23447889999999999999999999999877 567899999
Q ss_pred ecCCChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEeccccccccccc
Q 005226 485 ISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINIT 564 (707)
Q Consensus 485 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~~ 564 (707)
+++|+|.+++.... ..+++..++.++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+++.....
T Consensus 107 ~~~~~L~~~l~~~~----~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 179 (302)
T 4e5w_A 107 LPSGSLKEYLPKNK----NKINLKQQLKYAVQICKGMDYLGS---RQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETD 179 (302)
T ss_dssp CTTCBHHHHHHHHT----TTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEEECCCTTCEECCTT
T ss_pred CCCCcHHHHHHhcc----ccCCHHHHHHHHHHHHHHHHHhhc---CCcccCCCchheEEEcCCCCEEECcccccccccCC
Confidence 99999999996543 258999999999999999999999 89999999999999999999999999999876533
Q ss_pred CCCCCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchhHHH
Q 005226 565 GNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVR 644 (707)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~ 644 (707)
..... ......+|..|+|||.+.. ..++.++||||||+++|||+||+.|+.... .....
T Consensus 180 ~~~~~-------------~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~g~~p~~~~~-------~~~~~ 238 (302)
T 4e5w_A 180 KEYYT-------------VKDDRDSPVFWYAPECLMQ-SKFYIASDVWSFGVTLHELLTYCDSDSSPM-------ALFLK 238 (302)
T ss_dssp CCEEE-------------CCCCTTCCGGGCCHHHHHH-CEEEHHHHHHHHHHHHHHHHTTTCGGGSHH-------HHHHH
T ss_pred Cccee-------------ccCCCCCCccccCCeeecC-CCCCcchhHHHHHHHHHHHHHccCCCcchh-------hHHhh
Confidence 21100 1123456888999998654 667889999999999999999999864310 00000
Q ss_pred HHHhhccccCCCchhchHHHHhh---hhhHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHHhhc
Q 005226 645 WVKKGFEEENPLSDMVDAMLLQE---VHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERIG 706 (707)
Q Consensus 645 ~~~~~~~~~~~~~~~~d~~l~~~---~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~~L~~i~ 706 (707)
.. ...........+. ..+... .........+.+++.+||+.||.+|||++++++.|+++-
T Consensus 239 ~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 239 MI-GPTHGQMTVTRLV-NTLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp HH-CSCCGGGHHHHHH-HHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred cc-CCcccccCHHHHH-HHHhccCCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 00 0000000000000 000000 001123356889999999999999999999999999874
No 104
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=1.1e-39 Score=338.76 Aligned_cols=248 Identities=24% Similarity=0.336 Sum_probs=196.0
Q ss_pred eecccCeeEEEEEEe---CCCceEEEEEcCCCc--hhhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCcceEEEEeecCC
Q 005226 414 VLGKSGLGIVYKVVL---GNGIPVAVRRLGEGG--EQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNG 488 (707)
Q Consensus 414 ~lG~G~~g~Vy~~~~---~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~g 488 (707)
.||+|+||+||+|.. .++..||||++.... ....+++.+|++++++++||||+++++++ ..+..++||||+++|
T Consensus 24 ~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~lv~e~~~~~ 102 (291)
T 1xbb_A 24 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELG 102 (291)
T ss_dssp EEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEEEEEECCTTE
T ss_pred ccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcEEEEEeCCCC
Confidence 799999999999964 346889999987653 23357899999999999999999999999 567789999999999
Q ss_pred ChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEecccccccccccCCCC
Q 005226 489 NLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNP 568 (707)
Q Consensus 489 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~ 568 (707)
+|.+++.... .+++..+..++.||+.||+|||+ .+|+||||||+||+++.++.+||+|||+++.........
T Consensus 103 ~L~~~l~~~~-----~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 174 (291)
T 1xbb_A 103 PLNKYLQQNR-----HVKDKNIIELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 174 (291)
T ss_dssp EHHHHHHHCT-----TCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEE
T ss_pred CHHHHHHhCc-----CCCHHHHHHHHHHHHHHHHHHHh---CCeEcCCCCcceEEEeCCCcEEEccCCcceeeccCCCcc
Confidence 9999998643 58999999999999999999999 899999999999999999999999999998664322110
Q ss_pred CCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCCCccchhHHHHHH
Q 005226 569 SSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTSIEVPDLVRWVK 647 (707)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~ 647 (707)
. ......++..|+|||.+.. ..++.++||||||+++|||+| |+.||.... ...+...+.
T Consensus 175 ~-------------~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~~g~~p~~~~~------~~~~~~~~~ 234 (291)
T 1xbb_A 175 K-------------AQTHGKWPVKWYAPECINY-YKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK------GSEVTAMLE 234 (291)
T ss_dssp E-------------C----CCCGGGCCHHHHHH-CEEEHHHHHHHHHHHHHHHHTTTCCSSTTCC------HHHHHHHHH
T ss_pred c-------------ccccCCCCceeeChHHhcc-CCCChhhhHHHHHHHHHHHHhcCCCCCCCCC------HHHHHHHHH
Confidence 0 0122345788999998654 567889999999999999999 999986532 223333333
Q ss_pred hhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHHhh
Q 005226 648 KGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERI 705 (707)
Q Consensus 648 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~~L~~i 705 (707)
....... .......+.+++.+||+.||++||++.+|++.|+++
T Consensus 235 ~~~~~~~---------------~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~ 277 (291)
T 1xbb_A 235 KGERMGC---------------PAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNY 277 (291)
T ss_dssp TTCCCCC---------------CTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred cCCCCCC---------------CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 2221111 012234578999999999999999999999999886
No 105
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.3e-39 Score=344.04 Aligned_cols=250 Identities=24% Similarity=0.416 Sum_probs=192.4
Q ss_pred ceecccCeeEEEEEEeC-CCce----EEEEEcCCC-chhhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCcceEEEEeec
Q 005226 413 YVLGKSGLGIVYKVVLG-NGIP----VAVRRLGEG-GEQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFIS 486 (707)
Q Consensus 413 ~~lG~G~~g~Vy~~~~~-~~~~----vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~ 486 (707)
+.||+|+||.||+|... ++.. |++|.+... .....+.+.+|+.++++++||||+++++++..+. .++|+||++
T Consensus 21 ~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~~v~~~~~ 99 (327)
T 3lzb_A 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMP 99 (327)
T ss_dssp EEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EEEEECCCS
T ss_pred EEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ceEEEEecC
Confidence 48999999999999964 4444 577777544 3334578999999999999999999999998754 889999999
Q ss_pred CCChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEecccccccccccCC
Q 005226 487 NGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGN 566 (707)
Q Consensus 487 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~~ 566 (707)
+|+|.+++.... ..+++..++.|+.||+.||+|||+ ++|+||||||+||+++.++.+||+|||+++.......
T Consensus 100 ~g~L~~~l~~~~----~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~~~~ 172 (327)
T 3lzb_A 100 FGCLLDYVREHK----DNIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK 172 (327)
T ss_dssp SCBHHHHHHHTT----TCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEEETTEEEECCTTC---------
T ss_pred CCcHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHhh---CCCcCCCCCHHHEEEcCCCCEEEccCcceeEccCccc
Confidence 999999998653 358999999999999999999999 8999999999999999999999999999987643221
Q ss_pred CCCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCCCccchhHHHH
Q 005226 567 NPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTSIEVPDLVRW 645 (707)
Q Consensus 567 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~ 645 (707)
... .....+|..|+|||.+.. ..++.++|||||||++|||++ |+.||..... ..+...
T Consensus 173 ~~~--------------~~~~~~t~~y~aPE~~~~-~~~~~~~Di~slG~il~ell~~g~~p~~~~~~------~~~~~~ 231 (327)
T 3lzb_A 173 EYH--------------AEGGKVPIKWMALESILH-RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA------SEISSI 231 (327)
T ss_dssp ---------------------CCCGGGSCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCG------GGHHHH
T ss_pred ccc--------------ccCCCccccccCHHHHcC-CCCChHHHHHHHHHHHHHHHHCCCCCCCCCCH------HHHHHH
Confidence 111 112345778999998764 678899999999999999999 9999975322 233333
Q ss_pred HHhhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHHhhc
Q 005226 646 VKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERIG 706 (707)
Q Consensus 646 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~~L~~i~ 706 (707)
+........+ ......+.+++.+||+.||++||++.++++.|+++.
T Consensus 232 ~~~~~~~~~~---------------~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~ 277 (327)
T 3lzb_A 232 LEKGERLPQP---------------PICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMA 277 (327)
T ss_dssp HHTTCCCCCC---------------TTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHcCCCCCCC---------------ccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence 3332211111 112345788999999999999999999999999874
No 106
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=4.2e-39 Score=338.21 Aligned_cols=238 Identities=24% Similarity=0.300 Sum_probs=193.6
Q ss_pred ceecccCeeEEEEEEeC-CCceEEEEEcCCCc---hhhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCcceEEEEeecCC
Q 005226 413 YVLGKSGLGIVYKVVLG-NGIPVAVRRLGEGG---EQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNG 488 (707)
Q Consensus 413 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~g 488 (707)
+.||+|+||.||+|... +|+.||+|+++... ....+.+.+|+.+++.++||||+++++++.+.+..++||||+++|
T Consensus 12 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~e~~~gg 91 (318)
T 1fot_A 12 RTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGG 91 (318)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred EEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEEeCCCCC
Confidence 48999999999999975 78999999987542 123467889999999999999999999999999999999999999
Q ss_pred ChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEecccccccccccCCCC
Q 005226 489 NLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNP 568 (707)
Q Consensus 489 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~ 568 (707)
+|.+++.... .+++..+..++.||+.||+|||+ ++|+||||||+||+++.++.+||+|||+++......
T Consensus 92 ~L~~~l~~~~-----~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~~--- 160 (318)
T 1fot_A 92 ELFSLLRKSQ-----RFPNPVAKFYAAEVCLALEYLHS---KDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVT--- 160 (318)
T ss_dssp BHHHHHHHTS-----SCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEECTTSCEEECCCSSCEECSSCB---
T ss_pred CHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChheEEEcCCCCEEEeecCcceecCCcc---
Confidence 9999998643 58999999999999999999999 899999999999999999999999999998654211
Q ss_pred CCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchhHHHHHHh
Q 005226 569 SSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVRWVKK 648 (707)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~ 648 (707)
....||+.|+|||++.. ..++.++|||||||++|||++|+.||..... ......+..
T Consensus 161 ----------------~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~ell~g~~pf~~~~~------~~~~~~i~~ 217 (318)
T 1fot_A 161 ----------------YTLCGTPDYIAPEVVST-KPYNKSIDWWSFGILIYEMLAGYTPFYDSNT------MKTYEKILN 217 (318)
T ss_dssp ----------------CCCCSCTTTCCHHHHTT-CCBCTTHHHHHHHHHHHHHHHSSCTTCCSSH------HHHHHHHHH
T ss_pred ----------------ccccCCccccCHhHhcC-CCCCcccchhhhHHHHHHHHhCCCCCCCCCH------HHHHHHHHh
Confidence 12357999999999765 6788999999999999999999999964321 111111111
Q ss_pred hccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCC-----ChHHHHH
Q 005226 649 GFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRP-----RMKNVSE 700 (707)
Q Consensus 649 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~~v~~ 700 (707)
....+.. ....++.+++.+|+..||++|| +++++++
T Consensus 218 ---~~~~~p~-------------~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~ 258 (318)
T 1fot_A 218 ---AELRFPP-------------FFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKN 258 (318)
T ss_dssp ---CCCCCCT-------------TSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred ---CCCCCCC-------------CCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhc
Confidence 1111111 1224577999999999999999 8888764
No 107
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=2.7e-39 Score=339.09 Aligned_cols=239 Identities=23% Similarity=0.253 Sum_probs=187.9
Q ss_pred cceecccCeeEEEEEEeC-CCceEEEEEcCCCc--hhhHHHHHHHHHHHHhc-CCCceeeeEEEEEcCCcceEEEEeecC
Q 005226 412 AYVLGKSGLGIVYKVVLG-NGIPVAVRRLGEGG--EQRHREFVTEVQAIAKV-KHPNIVKLRAYYWAPDEKLLISDFISN 487 (707)
Q Consensus 412 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lV~e~~~~ 487 (707)
.+.||+|+||+||+|... +++.||||++.... ......+..|+..+.++ +||||++++++|.+++..++||||+ +
T Consensus 62 ~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~e~~-~ 140 (311)
T 3p1a_A 62 LSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQTELC-G 140 (311)
T ss_dssp EEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC-C
T ss_pred eheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEEecc-C
Confidence 457999999999999976 78999999986542 23335566677777666 9999999999999999999999999 7
Q ss_pred CChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEecccccccccccCCC
Q 005226 488 GNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNN 567 (707)
Q Consensus 488 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~~~ 567 (707)
|+|.+++.... ..++|..+..|+.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++........
T Consensus 141 ~~L~~~~~~~~----~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~~~ 213 (311)
T 3p1a_A 141 PSLQQHCEAWG----ASLPEAQVWGYLRDTLLALAHLHS---QGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAG 213 (311)
T ss_dssp CBHHHHHHHHC----SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECGGGCEEECCCTTCEECC-----
T ss_pred CCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHEEECCCCCEEEccceeeeecccCCCC
Confidence 79999987653 359999999999999999999999 89999999999999999999999999998765432211
Q ss_pred CCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchhHHHHHH
Q 005226 568 PSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVRWVK 647 (707)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~ 647 (707)
....||+.|+|||++.+ .++.++|||||||++|||++|..|+... .....+.
T Consensus 214 -----------------~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~el~~g~~~~~~~---------~~~~~~~ 265 (311)
T 3p1a_A 214 -----------------EVQEGDPRYMAPELLQG--SYGTAADVFSLGLTILEVACNMELPHGG---------EGWQQLR 265 (311)
T ss_dssp ------------------CCCCCGGGCCGGGGGT--CCSTHHHHHHHHHHHHHHHHTCCCCSSH---------HHHHHHT
T ss_pred -----------------cccCCCccccCHhHhcC--CCCchhhHHHHHHHHHHHHhCCCCCCCc---------cHHHHHh
Confidence 22347999999998653 6889999999999999999997765421 1111111
Q ss_pred hhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 005226 648 KGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSE 700 (707)
Q Consensus 648 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~ 700 (707)
. . ...+.+ .......+.+++.+||+.||++|||++++++
T Consensus 266 ~----~-----~~~~~~-----~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 304 (311)
T 3p1a_A 266 Q----G-----YLPPEF-----TAGLSSELRSVLVMMLEPDPKLRATAEALLA 304 (311)
T ss_dssp T----T-----CCCHHH-----HTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred c----c-----CCCccc-----ccCCCHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 1 0 011111 1123356889999999999999999999986
No 108
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=2.3e-39 Score=340.00 Aligned_cols=256 Identities=23% Similarity=0.392 Sum_probs=191.4
Q ss_pred cceecccCeeEEEEEEeC----CCceEEEEEcCCC--chhhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCc-----ceE
Q 005226 412 AYVLGKSGLGIVYKVVLG----NGIPVAVRRLGEG--GEQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDE-----KLL 480 (707)
Q Consensus 412 ~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~-----~~l 480 (707)
.+.||+|+||.||+|... ++..||+|++... .....+.+.+|++++++++||||+++++++.+.+. .++
T Consensus 39 ~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~ 118 (313)
T 3brb_A 39 GKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMV 118 (313)
T ss_dssp EEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-------CEEE
T ss_pred ccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccccCCcccEE
Confidence 458999999999999853 3458999998754 33345779999999999999999999999987653 499
Q ss_pred EEEeecCCChHHHHhCCCC-CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEecccccc
Q 005226 481 ISDFISNGNLANALRGRNG-QPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSR 559 (707)
Q Consensus 481 V~e~~~~gsL~~~l~~~~~-~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~ 559 (707)
||||+++|+|.+++..... .....+++..++.|+.||+.||+|||+ .+|+||||||+||+++.++.+||+|||+++
T Consensus 119 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dikp~NIli~~~~~~kl~Dfg~~~ 195 (313)
T 3brb_A 119 ILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSN---RNFLHRDLAARNCMLRDDMTVCVADFGLSK 195 (313)
T ss_dssp EEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHT---TTCCCCCCSGGGEEECTTSCEEECSCSCC-
T ss_pred EEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCcceEEEcCCCcEEEeecCcce
Confidence 9999999999999954321 123469999999999999999999999 899999999999999999999999999998
Q ss_pred cccccCCCCCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCCCcc
Q 005226 560 LINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTSIE 638 (707)
Q Consensus 560 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~ellt-g~~P~~~~~~~~~~~ 638 (707)
......... ......+++.|+|||.+.. ..++.++||||||+++|||++ |+.||.....
T Consensus 196 ~~~~~~~~~--------------~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~el~~~g~~p~~~~~~----- 255 (313)
T 3brb_A 196 KIYSGDYYR--------------QGRIAKMPVKWIAIESLAD-RVYTSKSDVWAFGVTMWEIATRGMTPYPGVQN----- 255 (313)
T ss_dssp -----------------------------CCGGGSCHHHHHS-SCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCG-----
T ss_pred ecccccccC--------------cccccCCCccccCchhhcC-CCccchhhhHHHHHHHHHHHhcCCCCCccCCH-----
Confidence 664322111 1123345788999999654 678899999999999999999 8888865322
Q ss_pred chhHHHHHHhhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHHhhc
Q 005226 639 VPDLVRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERIG 706 (707)
Q Consensus 639 ~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~~L~~i~ 706 (707)
..+...+........+ ......+.+++.+||+.||.+||++.++++.|+++.
T Consensus 256 -~~~~~~~~~~~~~~~~---------------~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~ 307 (313)
T 3brb_A 256 -HEMYDYLLHGHRLKQP---------------EDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLL 307 (313)
T ss_dssp -GGHHHHHHTTCCCCCB---------------TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred -HHHHHHHHcCCCCCCC---------------ccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 2333333322211111 122345789999999999999999999999998863
No 109
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=2e-39 Score=349.53 Aligned_cols=246 Identities=23% Similarity=0.282 Sum_probs=197.4
Q ss_pred cceecccCeeEEEEEEeC-CCceEEEEEcCCCchhhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCcceEEEEeecCCCh
Q 005226 412 AYVLGKSGLGIVYKVVLG-NGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNL 490 (707)
Q Consensus 412 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL 490 (707)
.+.||+|+||.||+|... +++.||+|.+..........+.+|++++++++||||+++++++.+.+..++||||+++|+|
T Consensus 56 ~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~~~gg~L 135 (387)
T 1kob_A 56 LEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGEL 135 (387)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECCCCCBH
T ss_pred EEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEcCCCCcH
Confidence 347999999999999975 6889999998776555557889999999999999999999999999999999999999999
Q ss_pred HHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcC--CCCeEEecccccccccccCCCC
Q 005226 491 ANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDN--DFQPYISDFGLSRLINITGNNP 568 (707)
Q Consensus 491 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~--~~~~kl~DfGla~~~~~~~~~~ 568 (707)
.+++.... ..+++..+..++.||+.||+|||+ .+|+||||||+|||++. ++.+||+|||+++.......
T Consensus 136 ~~~l~~~~----~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~~-- 206 (387)
T 1kob_A 136 FDRIAAED----YKMSEAEVINYMRQACEGLKHMHE---HSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEI-- 206 (387)
T ss_dssp HHHTTCTT----CCBCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSC--
T ss_pred HHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHHh---CCeeecccchHHeEEecCCCCceEEEecccceecCCCcc--
Confidence 99997543 358999999999999999999999 89999999999999974 47899999999987642211
Q ss_pred CCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchhHHHHHHh
Q 005226 569 SSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVRWVKK 648 (707)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~ 648 (707)
.....||+.|+|||++.. ..++.++|||||||++|||++|+.||.... .......+..
T Consensus 207 ---------------~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltg~~Pf~~~~------~~~~~~~i~~ 264 (387)
T 1kob_A 207 ---------------VKVTTATAEFAAPEIVDR-EPVGFYTDMWAIGVLGYVLLSGLSPFAGED------DLETLQNVKR 264 (387)
T ss_dssp ---------------EEEECSSGGGCCHHHHTT-CCBCHHHHHHHHHHHHHHHHHSCCSSCCSS------HHHHHHHHHH
T ss_pred ---------------eeeeccCCCccCchhccC-CCCCCcccEeeHhHHHHHHHhCCCCCCCCC------HHHHHHHHHh
Confidence 023457999999999765 678899999999999999999999996532 1122222222
Q ss_pred hccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 005226 649 GFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSE 700 (707)
Q Consensus 649 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~ 700 (707)
....... . .......++.+++.+||+.||++|||+.++++
T Consensus 265 ~~~~~~~--~----------~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~ 304 (387)
T 1kob_A 265 CDWEFDE--D----------AFSSVSPEAKDFIKNLLQKEPRKRLTVHDALE 304 (387)
T ss_dssp CCCCCCS--S----------TTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred CCCCCCc--c----------ccccCCHHHHHHHHHHcCCChhHCcCHHHHhh
Confidence 1110000 0 00112345789999999999999999999986
No 110
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=1.4e-39 Score=346.71 Aligned_cols=236 Identities=22% Similarity=0.290 Sum_probs=188.1
Q ss_pred ceecccCeeEEEEEEeC-CCceEEEEEcCCCc---hhhHHHHHHHHHHHHhc-CCCceeeeEEEEEcCCcceEEEEeecC
Q 005226 413 YVLGKSGLGIVYKVVLG-NGIPVAVRRLGEGG---EQRHREFVTEVQAIAKV-KHPNIVKLRAYYWAPDEKLLISDFISN 487 (707)
Q Consensus 413 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lV~e~~~~ 487 (707)
+.||+|+||.||+|+.. +++.||||+++... ......+.+|.++++.+ +||||+++++++.+.+..++||||+++
T Consensus 29 ~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lv~E~~~g 108 (353)
T 3txo_A 29 RVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNG 108 (353)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEECCCS
T ss_pred EEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEEEEeCCCC
Confidence 48999999999999965 68999999987542 23346688999999998 799999999999999999999999999
Q ss_pred CChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEecccccccccccCCC
Q 005226 488 GNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNN 567 (707)
Q Consensus 488 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~~~ 567 (707)
|+|.+++.... .+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++........
T Consensus 109 g~L~~~l~~~~-----~~~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~~~~ 180 (353)
T 3txo_A 109 GDLMFHIQKSR-----RFDEARARFYAAEIISALMFLHD---KGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVT 180 (353)
T ss_dssp CBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC----
T ss_pred CcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHH---CCCcccCCCHHHEEECCCCCEEEccccceeecccCCcc
Confidence 99999997643 59999999999999999999999 89999999999999999999999999999753321111
Q ss_pred CCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchhHHHHHH
Q 005226 568 PSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVRWVK 647 (707)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~ 647 (707)
.....||+.|+|||++.. ..++.++|||||||++|||++|+.||..... ..+.+.+.
T Consensus 181 ----------------~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~ell~G~~Pf~~~~~------~~~~~~i~ 237 (353)
T 3txo_A 181 ----------------TATFCGTPDYIAPEILQE-MLYGPAVDWWAMGVLLYEMLCGHAPFEAENE------DDLFEAIL 237 (353)
T ss_dssp ---------------------CCGGGCCHHHHHH-HHCTTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHH
T ss_pred ----------------ccccCCCcCeEChhhcCC-CCcCCccCCCcchHHHHHHHhCCCCCCCCCH------HHHHHHHH
Confidence 123457999999998654 6678999999999999999999999965321 12222221
Q ss_pred hhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCCh
Q 005226 648 KGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRM 695 (707)
Q Consensus 648 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~ 695 (707)
. ....+. ......+.+++.+|++.||++||++
T Consensus 238 ~---~~~~~p-------------~~~~~~~~~li~~lL~~dP~~R~~~ 269 (353)
T 3txo_A 238 N---DEVVYP-------------TWLHEDATGILKSFMTKNPTMRLGS 269 (353)
T ss_dssp H---CCCCCC-------------TTSCHHHHHHHHHHTCSSGGGSTTS
T ss_pred c---CCCCCC-------------CCCCHHHHHHHHHHhhhCHHHccCC
Confidence 1 111111 1122456789999999999999998
No 111
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=1.1e-39 Score=343.36 Aligned_cols=262 Identities=26% Similarity=0.376 Sum_probs=197.7
Q ss_pred ceecccCeeEEEEEEeC-----CCceEEEEEcCCCc-hhhHHHHHHHHHHHHhcCCCceeeeEEEEEcC--CcceEEEEe
Q 005226 413 YVLGKSGLGIVYKVVLG-----NGIPVAVRRLGEGG-EQRHREFVTEVQAIAKVKHPNIVKLRAYYWAP--DEKLLISDF 484 (707)
Q Consensus 413 ~~lG~G~~g~Vy~~~~~-----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~~~lV~e~ 484 (707)
+.||+|+||+||++.+. +++.||||++.... ....+.+.+|++++++++||||+++++++.+. ...++||||
T Consensus 37 ~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~ 116 (318)
T 3lxp_A 37 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEY 116 (318)
T ss_dssp EEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEEEECC
T ss_pred heecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEEEEec
Confidence 47999999999998642 68899999998653 34457799999999999999999999999875 456899999
Q ss_pred ecCCChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEeccccccccccc
Q 005226 485 ISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINIT 564 (707)
Q Consensus 485 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~~ 564 (707)
+++|+|.+++... .+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++.....
T Consensus 117 ~~~~~L~~~l~~~------~~~~~~~~~i~~~l~~~l~~LH~---~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~ 187 (318)
T 3lxp_A 117 VPLGSLRDYLPRH------SIGLAQLLLFAQQICEGMAYLHA---QHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEG 187 (318)
T ss_dssp CTTCBHHHHGGGS------CCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCGGGCEECCTT
T ss_pred ccCCcHHHHHhhC------CCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCchheEEEcCCCCEEECCcccccccccc
Confidence 9999999999764 38999999999999999999999 89999999999999999999999999999876532
Q ss_pred CCCCCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchhHHH
Q 005226 565 GNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVR 644 (707)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~ 644 (707)
.... .......+|..|+|||++.. ..++.++||||||+++|||+||+.||..... ....
T Consensus 188 ~~~~-------------~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~ll~g~~p~~~~~~-------~~~~ 246 (318)
T 3lxp_A 188 HEYY-------------RVREDGDSPVFWYAPECLKE-YKFYYASDVWSFGVTLYELLTHCDSSQSPPT-------KFLE 246 (318)
T ss_dssp CSEE-------------EC---CCCCGGGCCHHHHHH-CEEEHHHHHHHHHHHHHHHHTTTCGGGSHHH-------HHHH
T ss_pred cccc-------------ccccCCCCCceeeChHHhcC-CCCCcHHHHHHHHHHHHHHHhCCCcccccch-------hhhh
Confidence 2100 01123346888999998654 5678899999999999999999999864211 0000
Q ss_pred HHHhhccccCCCchhchHHHHh---hhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHHhhc
Q 005226 645 WVKKGFEEENPLSDMVDAMLLQ---EVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERIG 706 (707)
Q Consensus 645 ~~~~~~~~~~~~~~~~d~~l~~---~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~~L~~i~ 706 (707)
+.... ........ +...+.. ..........+.+++.+||+.||++|||+.++++.|+++.
T Consensus 247 ~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~ 309 (318)
T 3lxp_A 247 LIGIA-QGQMTVLR-LTELLERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVH 309 (318)
T ss_dssp HHCSC-CHHHHHHH-HHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred hhccc-ccchhHHH-HHHHHhcccCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHH
Confidence 00000 00000000 0000000 0001223356889999999999999999999999999874
No 112
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=4.8e-40 Score=347.40 Aligned_cols=263 Identities=26% Similarity=0.383 Sum_probs=200.8
Q ss_pred cceecccCeeEEEEEEe-----CCCceEEEEEcCCCchhhHHHHHHHHHHHHhcCCCceeeeEEEEEc--CCcceEEEEe
Q 005226 412 AYVLGKSGLGIVYKVVL-----GNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWA--PDEKLLISDF 484 (707)
Q Consensus 412 ~~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~--~~~~~lV~e~ 484 (707)
.+.||+|+||.||+|.+ .++..||||++........+.+.+|++++++++||||+++++++.. ....++||||
T Consensus 28 ~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~ 107 (327)
T 3lxl_A 28 ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEY 107 (327)
T ss_dssp EEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEEEEEEC
T ss_pred hhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEEEEEee
Confidence 34899999999999984 4688999999988766666789999999999999999999999874 4557899999
Q ss_pred ecCCChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEeccccccccccc
Q 005226 485 ISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINIT 564 (707)
Q Consensus 485 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~~ 564 (707)
+++|+|.+++.... ..+++..++.|+.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++.....
T Consensus 108 ~~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~ 180 (327)
T 3lxl_A 108 LPSGCLRDFLQRHR----ARLDASRLLLYSSQICKGMEYLGS---RRCVHRDLAARNILVESEAHVKIADFGLAKLLPLD 180 (327)
T ss_dssp CTTCBHHHHHHHHG----GGCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEEECCGGGCEECCTT
T ss_pred cCCCCHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCChhhEEECCCCCEEEcccccceecccC
Confidence 99999999997643 258999999999999999999999 89999999999999999999999999999876432
Q ss_pred CCCCCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchhHHH
Q 005226 565 GNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVR 644 (707)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~ 644 (707)
..... ......+|..|+|||++.. ..++.++||||||+++|||++|+.||..... .
T Consensus 181 ~~~~~-------------~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~ll~g~~p~~~~~~----------~ 236 (327)
T 3lxl_A 181 KDYYV-------------VREPGQSPIFWYAPESLSD-NIFSRQSDVWSFGVVLYELFTYCDKSCSPSA----------E 236 (327)
T ss_dssp CSEEE-------------CSSCCCSCGGGSCHHHHHH-CEEEHHHHHHHHHHHHHHHHTTTCGGGSHHH----------H
T ss_pred Cccce-------------eeccCCccccccCHHHhcc-CCCChHHhHHHHHHHHHHHHhCCCCCccccc----------h
Confidence 21100 1123456888999998654 6678999999999999999999999864211 0
Q ss_pred HHHhhccc-cCCCchhchHHHHhh---hhhHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHHhh
Q 005226 645 WVKKGFEE-ENPLSDMVDAMLLQE---VHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERI 705 (707)
Q Consensus 645 ~~~~~~~~-~~~~~~~~d~~l~~~---~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~~L~~i 705 (707)
........ .......+...+... .........+.+++.+||+.||++|||++++++.|+.+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~ 301 (327)
T 3lxl_A 237 FLRMMGCERDVPALSRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDML 301 (327)
T ss_dssp HHHHCC----CCHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC
T ss_pred hhhhcccccccccHHHHHHHhhcccCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 00000000 000000000000000 01122345688999999999999999999999999886
No 113
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=5.5e-39 Score=341.34 Aligned_cols=260 Identities=22% Similarity=0.332 Sum_probs=198.9
Q ss_pred cceecccCeeEEEEEEeCCCceEEEEEcCCCchhhHHHHHHHHHHHHh--cCCCceeeeEEEEEcCC----cceEEEEee
Q 005226 412 AYVLGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAK--VKHPNIVKLRAYYWAPD----EKLLISDFI 485 (707)
Q Consensus 412 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~H~niv~l~~~~~~~~----~~~lV~e~~ 485 (707)
.+.||+|+||.||+|.. +++.||||++.... ...+.+|++++.. ++||||+++++++...+ ..++||||+
T Consensus 47 ~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~---~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~ 122 (342)
T 1b6c_B 47 QESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYH 122 (342)
T ss_dssp EEEEEEETTEEEEEEEE-TTEEEEEEEECGGG---HHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCCEEEEECCC
T ss_pred EeeecCCCCcEEEEEEE-cCccEEEEEeCchh---HHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccceeEEEEeec
Confidence 45899999999999998 68899999986532 3567889999887 79999999999998876 789999999
Q ss_pred cCCChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHh--------hcCCCCceecCCCCCCeEEcCCCCeEEecccc
Q 005226 486 SNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLH--------ECSPRKFVHGDIKPSNILLDNDFQPYISDFGL 557 (707)
Q Consensus 486 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH--------~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGl 557 (707)
++|+|.+++... .+++..++.++.|++.||+||| + .+|+||||||+||+++.++.+||+|||+
T Consensus 123 ~~g~L~~~l~~~------~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~---~~ivH~Dlkp~NIll~~~~~~kL~Dfg~ 193 (342)
T 1b6c_B 123 EHGSLFDYLNRY------TVTVEGMIKLALSTASGLAHLHMEIVGTQGK---PAIAHRDLKSKNILVKKNGTCCIADLGL 193 (342)
T ss_dssp TTCBHHHHHHHC------CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCB---CEEECSCCSGGGEEECTTSCEEECCCTT
T ss_pred CCCcHHHHHhcc------CccHHHHHHHHHHHHHHHHHHHHHHhhhccc---CCeeeCCCCHHHEEECCCCCEEEEECCC
Confidence 999999999754 4899999999999999999999 6 7999999999999999999999999999
Q ss_pred cccccccCCCCCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCC-----CCchhhHHHHHHHHHHHHhC--------
Q 005226 558 SRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNR-----PMQKWDVYSFGVVLLELLTG-------- 624 (707)
Q Consensus 558 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-----~~~~~DV~S~Gv~l~elltg-------- 624 (707)
++.......... .......||+.|+|||++..... ++.++||||||+++|||+||
T Consensus 194 ~~~~~~~~~~~~------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~ 261 (342)
T 1b6c_B 194 AVRHDSATDTID------------IAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHE 261 (342)
T ss_dssp CEEEETTTTEEE------------ECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCC
T ss_pred ceeccccccccc------------cccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCccc
Confidence 987653221100 01123457999999999765322 23689999999999999999
Q ss_pred --CCCCCCCCCCCCccchhHHHHHHhhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHHHH
Q 005226 625 --KSPELSPTTSTSIEVPDLVRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENL 702 (707)
Q Consensus 625 --~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~~L 702 (707)
+.||....... .....+.......... .. +. ......+....+.+++.+||+.||++|||+++|++.|
T Consensus 262 ~~~~p~~~~~~~~----~~~~~~~~~~~~~~~~-~~-~~----~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L 331 (342)
T 1b6c_B 262 DYQLPYYDLVPSD----PSVEEMRKVVCEQKLR-PN-IP----NRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTL 331 (342)
T ss_dssp CCCCTTTTTSCSS----CCHHHHHHHHTTSCCC-CC-CC----GGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHH
T ss_pred ccccCccccCcCc----ccHHHHHHHHHHHHhC-CC-Cc----ccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHH
Confidence 67776543221 1112222211111100 00 01 0111234556789999999999999999999999999
Q ss_pred Hhhc
Q 005226 703 ERIG 706 (707)
Q Consensus 703 ~~i~ 706 (707)
+++.
T Consensus 332 ~~i~ 335 (342)
T 1b6c_B 332 SQLS 335 (342)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9874
No 114
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=3.3e-39 Score=339.39 Aligned_cols=261 Identities=23% Similarity=0.333 Sum_probs=190.2
Q ss_pred ceecccCeeEEEEEEeC-CCceEEEEEcCCCch-hhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCcceEEEEeecCCCh
Q 005226 413 YVLGKSGLGIVYKVVLG-NGIPVAVRRLGEGGE-QRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNL 490 (707)
Q Consensus 413 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL 490 (707)
+.||+|+||.||+|... +++.||+|+++.... ...+.+.+|++++++++||||+++++++..++..++||||++ |+|
T Consensus 11 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~-~~L 89 (317)
T 2pmi_A 11 EKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFEFMD-NDL 89 (317)
T ss_dssp --------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEECCC-CBH
T ss_pred eEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEEecC-CCH
Confidence 37999999999999964 689999999865432 234678899999999999999999999999999999999998 699
Q ss_pred HHHHhCCC-CCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEecccccccccccCCCCC
Q 005226 491 ANALRGRN-GQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPS 569 (707)
Q Consensus 491 ~~~l~~~~-~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~ 569 (707)
.+++.... +.....+++..+..++.||+.||+|||+ .+|+||||||+||+++.++.+||+|||+++.........
T Consensus 90 ~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~---~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~- 165 (317)
T 2pmi_A 90 KKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHE---NKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTF- 165 (317)
T ss_dssp HHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCSSCEETTSCCCCC-
T ss_pred HHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCChHHeEEcCCCCEEECcCccceecCCCcccC-
Confidence 99986532 1223458999999999999999999999 899999999999999999999999999998764221111
Q ss_pred CCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchhHHHHHHhh
Q 005226 570 SSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVRWVKKG 649 (707)
Q Consensus 570 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~ 649 (707)
....||+.|+|||++.....++.++|||||||++|||++|+.||..... ......+...
T Consensus 166 ---------------~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~------~~~~~~i~~~ 224 (317)
T 2pmi_A 166 ---------------SSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTND------EEQLKLIFDI 224 (317)
T ss_dssp ---------------CCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH------HHHHHHHHHH
T ss_pred ---------------CCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCh------HHHHHHHHHH
Confidence 2235689999999976656789999999999999999999999975321 1122222111
Q ss_pred ccccC-CC------------------chhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 005226 650 FEEEN-PL------------------SDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSE 700 (707)
Q Consensus 650 ~~~~~-~~------------------~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~ 700 (707)
..... .. ...+...+. ..........+.+++.+||+.||++|||++|+++
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~ 293 (317)
T 2pmi_A 225 MGTPNESLWPSVTKLPKYNPNIQQRPPRDLRQVLQ-PHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALH 293 (317)
T ss_dssp HCSCCTTTCGGGGGCTTCCTTCCCCCCCCSHHHHG-GGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred hCCCChhHhhhhhhhhhcccccccccchhHHHhhc-ccccccCCHHHHHHHHHHCCCCcccCCCHHHHhC
Confidence 11000 00 000011110 0001122356889999999999999999999875
No 115
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=7.4e-39 Score=338.19 Aligned_cols=241 Identities=24% Similarity=0.283 Sum_probs=184.6
Q ss_pred ceecccCeeEEEEEEe----CCCceEEEEEcCCCc----hhhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCcceEEEEe
Q 005226 413 YVLGKSGLGIVYKVVL----GNGIPVAVRRLGEGG----EQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDF 484 (707)
Q Consensus 413 ~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~ 484 (707)
+.||+|+||.||++.. .+++.||+|+++... ......+.+|++++++++||||+++++++..++..++||||
T Consensus 23 ~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 102 (327)
T 3a62_A 23 RVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYLILEY 102 (327)
T ss_dssp EEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred EEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCEEEEEEeC
Confidence 4899999999999997 478999999987652 22345678899999999999999999999999999999999
Q ss_pred ecCCChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEeccccccccccc
Q 005226 485 ISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINIT 564 (707)
Q Consensus 485 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~~ 564 (707)
+++|+|.+++.... .+++..+..++.||+.||+|||+ ++|+||||||+||+++.++.+||+|||+++.....
T Consensus 103 ~~~~~L~~~l~~~~-----~~~~~~~~~~~~qi~~al~~lH~---~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 174 (327)
T 3a62_A 103 LSGGELFMQLEREG-----IFMEDTACFYLAEISMALGHLHQ---KGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHD 174 (327)
T ss_dssp CTTEEHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCTTTEEECTTSCEEECCCSCC------
T ss_pred CCCCcHHHHHHhCC-----CCCHHHHHHHHHHHHHHHHHHHh---CCEEcccCCHHHeEECCCCcEEEEeCCcccccccC
Confidence 99999999997543 58999999999999999999999 89999999999999999999999999998754322
Q ss_pred CCCCCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchhHHH
Q 005226 565 GNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVR 644 (707)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~ 644 (707)
.... ....||+.|+|||++.. ..++.++||||||+++|||++|+.||..... .....
T Consensus 175 ~~~~----------------~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~el~~g~~pf~~~~~------~~~~~ 231 (327)
T 3a62_A 175 GTVT----------------HTFCGTIEYMAPEILMR-SGHNRAVDWWSLGALMYDMLTGAPPFTGENR------KKTID 231 (327)
T ss_dssp --------------------CTTSSCCTTSCHHHHTT-SCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH------HHHHH
T ss_pred Cccc----------------cccCCCcCccCHhhCcC-CCCCCcccchhHHHHHHHHHHCCCCCCCCCH------HHHHH
Confidence 1110 22357999999999765 6778999999999999999999999964321 12222
Q ss_pred HHHhhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCC-----ChHHHHH
Q 005226 645 WVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRP-----RMKNVSE 700 (707)
Q Consensus 645 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~~v~~ 700 (707)
.+... ...+. ......+.+++.+||+.||++|| ++.++++
T Consensus 232 ~i~~~---~~~~p-------------~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~ 276 (327)
T 3a62_A 232 KILKC---KLNLP-------------PYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQA 276 (327)
T ss_dssp HHHHT---CCCCC-------------TTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHH
T ss_pred HHHhC---CCCCC-------------CCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHc
Confidence 22111 11111 11224577999999999999999 6667654
No 116
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=2.4e-39 Score=344.66 Aligned_cols=263 Identities=18% Similarity=0.239 Sum_probs=193.5
Q ss_pred ceecccCeeEEEEEEeC----CCceEEEEEcCCCchh-----------hHHHHHHHHHHHHhcCCCceeeeEEEEEc---
Q 005226 413 YVLGKSGLGIVYKVVLG----NGIPVAVRRLGEGGEQ-----------RHREFVTEVQAIAKVKHPNIVKLRAYYWA--- 474 (707)
Q Consensus 413 ~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~-----------~~~~~~~E~~~l~~l~H~niv~l~~~~~~--- 474 (707)
+.||+|+||.||+|... ++..+|||+....... ....+.+|+..++.++||||+++++++..
T Consensus 43 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~~~~~~~ 122 (345)
T 2v62_A 43 KKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGSGLTEFK 122 (345)
T ss_dssp EEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEEEEEESS
T ss_pred eeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecccccccC
Confidence 48999999999999975 5788999998765321 11346788999999999999999999988
Q ss_pred -CCcceEEEEeecCCChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCC--CeE
Q 005226 475 -PDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDF--QPY 551 (707)
Q Consensus 475 -~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~--~~k 551 (707)
....++||||+ +++|.+++.... .+++..++.|+.||+.||+|||+ .+|+||||||+||+++.++ .+|
T Consensus 123 ~~~~~~lv~e~~-~~~L~~~l~~~~-----~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~~~k 193 (345)
T 2v62_A 123 GRSYRFMVMERL-GIDLQKISGQNG-----TFKKSTVLQLGIRMLDVLEYIHE---NEYVHGDIKAANLLLGYKNPDQVY 193 (345)
T ss_dssp SCEEEEEEEECE-EEEHHHHCBGGG-----BCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEESSSTTSEE
T ss_pred CCcEEEEEEecc-CCCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCcCHHHEEEccCCCCcEE
Confidence 67789999999 999999998643 69999999999999999999999 8999999999999999887 999
Q ss_pred EecccccccccccCCCCCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Q 005226 552 ISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSP 631 (707)
Q Consensus 552 l~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~ 631 (707)
|+|||+++.+.......... ........||..|+|||++.. ..++.++|||||||++|||+||+.||...
T Consensus 194 L~Dfg~a~~~~~~~~~~~~~---------~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di~slG~il~ell~g~~pf~~~ 263 (345)
T 2v62_A 194 LADYGLSYRYCPNGNHKQYQ---------ENPRKGHNGTIEFTSLDAHKG-VALSRRSDVEILGYCMLRWLCGKLPWEQN 263 (345)
T ss_dssp ECCCTTCEESSGGGCCCCCC---------CCGGGCSCSCTTTCCHHHHHT-CCCCHHHHHHHHHHHHHHHHHSSCTTGGG
T ss_pred EEeCCCceecccccccccch---------hccccccCCCccccCHHHhcC-CCCCchhhHHHHHHHHHHHHhCCCCcccc
Confidence 99999998775432211100 001123467999999999665 67899999999999999999999999642
Q ss_pred CCCCCccchhHHHHHHhhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHHhh
Q 005226 632 TTSTSIEVPDLVRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERI 705 (707)
Q Consensus 632 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~~L~~i 705 (707)
... .............. +...+............+.+++.+||+.||++||++++|++.|+.+
T Consensus 264 ~~~-----~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~ 326 (345)
T 2v62_A 264 LKD-----PVAVQTAKTNLLDE------LPQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPH 326 (345)
T ss_dssp TTC-----HHHHHHHHHHHHHT------TTHHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTT
T ss_pred ccc-----cHHHHHHHHhhccc------ccHHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhcc
Confidence 211 11111111111111 1111111000012345788999999999999999999999999875
No 117
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=6.4e-39 Score=347.90 Aligned_cols=245 Identities=22% Similarity=0.295 Sum_probs=186.3
Q ss_pred ceecccCeeEEEEEEeC-CCceEEEEEcCCCchhhHHHHHHHHHHHHhc-CCCceeeeEEEEEc----CCcceEEEEeec
Q 005226 413 YVLGKSGLGIVYKVVLG-NGIPVAVRRLGEGGEQRHREFVTEVQAIAKV-KHPNIVKLRAYYWA----PDEKLLISDFIS 486 (707)
Q Consensus 413 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~----~~~~~lV~e~~~ 486 (707)
++||+|+||+||++... +++.||||++... ..+.+|++++.++ +||||+++++++.. .+..++||||++
T Consensus 68 ~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~-----~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv~E~~~ 142 (400)
T 1nxk_A 68 QVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLD 142 (400)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCC
T ss_pred ceeeeccCeEEEEEEECCCCCEEEEEEeCcc-----hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEEEEeCC
Confidence 47999999999999965 6889999998643 4567899987555 89999999999875 456799999999
Q ss_pred CCChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcC---CCCeEEecccccccccc
Q 005226 487 NGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDN---DFQPYISDFGLSRLINI 563 (707)
Q Consensus 487 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~---~~~~kl~DfGla~~~~~ 563 (707)
+|+|.+++.... ...+++..+..|+.||+.||+|||+ .+|+||||||+|||++. ++.+||+|||+++....
T Consensus 143 gg~L~~~l~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~~ 216 (400)
T 1nxk_A 143 GGELFSRIQDRG---DQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTS 216 (400)
T ss_dssp SEEHHHHHHCC------CCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSSSTTCCEEECCCTTCEECC-
T ss_pred CCcHHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCcCcceEEEecCCCCccEEEEecccccccCC
Confidence 999999998653 2369999999999999999999999 89999999999999998 78999999999986542
Q ss_pred cCCCCCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchhHH
Q 005226 564 TGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLV 643 (707)
Q Consensus 564 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~~ 643 (707)
.... ....||+.|+|||++.. ..++.++|||||||++|||++|+.||......... ....
T Consensus 217 ~~~~-----------------~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~--~~~~ 276 (400)
T 1nxk_A 217 HNSL-----------------TTPCYTPYYVAPEVLGP-EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS--PGMK 276 (400)
T ss_dssp ---------------------------CTTCCGGGSCC-CCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSC--CSHH
T ss_pred CCcc-----------------ccCCCCCCccCHhhcCC-CCCCCcccHHHHHHHHHHHHhCCCCCCCCcccccc--HHHH
Confidence 2110 23456999999999754 77899999999999999999999999764432111 1122
Q ss_pred HHHHhhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 005226 644 RWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSE 700 (707)
Q Consensus 644 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~ 700 (707)
..+........ .+ .......++.+++.+||+.||++|||+.++++
T Consensus 277 ~~i~~~~~~~~------~~------~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~ 321 (400)
T 1nxk_A 277 TRIRMGQYEFP------NP------EWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN 321 (400)
T ss_dssp HHHHHTCCCCC------TT------TTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred HHHHcCcccCC------Cc------ccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 22221110000 00 00122345789999999999999999999986
No 118
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=5.4e-39 Score=341.91 Aligned_cols=239 Identities=19% Similarity=0.253 Sum_probs=194.8
Q ss_pred cceecccCeeEEEEEEeC-CCceEEEEEcCCCc---hhhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCcceEEEEeecC
Q 005226 412 AYVLGKSGLGIVYKVVLG-NGIPVAVRRLGEGG---EQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISN 487 (707)
Q Consensus 412 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~ 487 (707)
.+.||+|+||.||+|... +|+.||+|++.... ....+.+.+|++++++++||||+++++++.+++..++||||+++
T Consensus 46 ~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~g 125 (350)
T 1rdq_E 46 IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG 125 (350)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTT
T ss_pred EEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEEcCCCC
Confidence 348999999999999975 68999999986542 22346788999999999999999999999999999999999999
Q ss_pred CChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEecccccccccccCCC
Q 005226 488 GNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNN 567 (707)
Q Consensus 488 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~~~ 567 (707)
|+|.+++.... .+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++......
T Consensus 126 g~L~~~l~~~~-----~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~~-- 195 (350)
T 1rdq_E 126 GEMFSHLRRIG-----RFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-- 195 (350)
T ss_dssp CBHHHHHHHHC-----CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECSSCB--
T ss_pred CcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHH---CCcccccCccceEEECCCCCEEEcccccceeccCCc--
Confidence 99999998643 58999999999999999999999 899999999999999999999999999998654211
Q ss_pred CCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchhHHHHHH
Q 005226 568 PSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVRWVK 647 (707)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~ 647 (707)
....||+.|+|||++.. ..++.++|||||||++|||++|+.||.... ...+.+.+.
T Consensus 196 -----------------~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~ell~g~~Pf~~~~------~~~~~~~i~ 251 (350)
T 1rdq_E 196 -----------------WTLCGTPEALAPEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFFADQ------PIQIYEKIV 251 (350)
T ss_dssp -----------------CCCEECGGGCCHHHHTT-CCBCTHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHH
T ss_pred -----------------ccccCCccccCHHHhcC-CCCCCcCCEecccHhHhHHhhCCCCCCCCC------HHHHHHHHH
Confidence 23457999999999765 678899999999999999999999996432 112222221
Q ss_pred hhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCC-----hHHHHH
Q 005226 648 KGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPR-----MKNVSE 700 (707)
Q Consensus 648 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs-----~~~v~~ 700 (707)
.. ...+. ......+.+++.+||+.||++||+ +++|++
T Consensus 252 ~~---~~~~p-------------~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~ 293 (350)
T 1rdq_E 252 SG---KVRFP-------------SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293 (350)
T ss_dssp HC---CCCCC-------------TTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred cC---CCCCC-------------CCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHh
Confidence 11 11111 112345789999999999999998 777754
No 119
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=2.8e-39 Score=339.55 Aligned_cols=256 Identities=27% Similarity=0.433 Sum_probs=200.9
Q ss_pred cceecccCeeEEEEEEe------CCCceEEEEEcCCCc-hhhHHHHHHHHHHHHhc-CCCceeeeEEEEEcCC-cceEEE
Q 005226 412 AYVLGKSGLGIVYKVVL------GNGIPVAVRRLGEGG-EQRHREFVTEVQAIAKV-KHPNIVKLRAYYWAPD-EKLLIS 482 (707)
Q Consensus 412 ~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~-~~~lV~ 482 (707)
.+.||+|+||.||+|.. .+++.||||++.... ....+.+.+|+++++++ +||||+++++++...+ ..++||
T Consensus 32 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~~lv~ 111 (316)
T 2xir_A 32 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIV 111 (316)
T ss_dssp EEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCCEEEE
T ss_pred eeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCCCceEEEE
Confidence 45899999999999984 356889999997653 33456899999999999 7999999999998765 489999
Q ss_pred EeecCCChHHHHhCCCCCC-----------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeE
Q 005226 483 DFISNGNLANALRGRNGQP-----------STSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPY 551 (707)
Q Consensus 483 e~~~~gsL~~~l~~~~~~~-----------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~k 551 (707)
||+++|+|.+++....... ...+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+|
T Consensus 112 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~i~H~dikp~Nil~~~~~~~k 188 (316)
T 2xir_A 112 EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVK 188 (316)
T ss_dssp ECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEE
T ss_pred EcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHh---CCcccccCccceEEECCCCCEE
Confidence 9999999999998754210 1238999999999999999999999 8999999999999999999999
Q ss_pred EecccccccccccCCCCCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCC
Q 005226 552 ISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELS 630 (707)
Q Consensus 552 l~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~ellt-g~~P~~~ 630 (707)
|+|||+++........ .......+|+.|+|||++.. ..++.++||||||+++|||+| |+.||..
T Consensus 189 l~Dfg~~~~~~~~~~~--------------~~~~~~~~t~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~t~g~~p~~~ 253 (316)
T 2xir_A 189 ICDFGLARDIYKDPDY--------------VRKGDARLPLKWMAPETIFD-RVYTIQSDVWSFGVLLWEIFSLGASPYPG 253 (316)
T ss_dssp ECCCGGGSCTTTCTTS--------------EEETTEEECGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred ECCCccccccccCccc--------------eeccCCCcceeecCchhhcc-ccccchhHHHHHHHHHHHHHhCCCCCCcc
Confidence 9999999865422110 01123456889999998654 678899999999999999998 9999865
Q ss_pred CCCCCCccchhHHHHHHhhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHHhh
Q 005226 631 PTTSTSIEVPDLVRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERI 705 (707)
Q Consensus 631 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~~L~~i 705 (707)
.... ..+...+........+ ......+.+++.+||+.||.+|||+.+|++.|+.+
T Consensus 254 ~~~~-----~~~~~~~~~~~~~~~~---------------~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~ 308 (316)
T 2xir_A 254 VKID-----EEFCRRLKEGTRMRAP---------------DYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 308 (316)
T ss_dssp CCCS-----HHHHHHHHHTCCCCCC---------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred cchh-----HHHHHHhccCccCCCC---------------CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 3321 1222222222111110 11224578899999999999999999999999886
No 120
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=2.9e-39 Score=342.93 Aligned_cols=240 Identities=22% Similarity=0.318 Sum_probs=193.0
Q ss_pred ceecccCeeEEEEEEeC-CCceEEEEEcCCCc---hhhHHHHHHHHHHHHhc-CCCceeeeEEEEEcCCcceEEEEeecC
Q 005226 413 YVLGKSGLGIVYKVVLG-NGIPVAVRRLGEGG---EQRHREFVTEVQAIAKV-KHPNIVKLRAYYWAPDEKLLISDFISN 487 (707)
Q Consensus 413 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lV~e~~~~ 487 (707)
+.||+|+||.||+|... +++.||+|+++... ......+..|.+++.++ +||||+++++++.+.+..++||||+++
T Consensus 23 ~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~lv~E~~~g 102 (345)
T 1xjd_A 23 KMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNG 102 (345)
T ss_dssp EEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCTT
T ss_pred EEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEEEEEeCCCC
Confidence 48999999999999975 68999999987542 22346678899999987 999999999999999999999999999
Q ss_pred CChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEecccccccccccCCC
Q 005226 488 GNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNN 567 (707)
Q Consensus 488 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~~~ 567 (707)
|+|.+++.... .+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++........
T Consensus 103 g~L~~~l~~~~-----~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~ 174 (345)
T 1xjd_A 103 GDLMYHIQSCH-----KFDLSRATFYAAEIILGLQFLHS---KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK 174 (345)
T ss_dssp CBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCC
T ss_pred CcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCChhhEEECCCCCEEEeEChhhhhcccCCCc
Confidence 99999997643 58999999999999999999999 89999999999999999999999999999754321111
Q ss_pred CCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchhHHHHHH
Q 005226 568 PSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVRWVK 647 (707)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~ 647 (707)
.....||+.|+|||++.. ..++.++|||||||++|||++|+.||.... ...+...+.
T Consensus 175 ----------------~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~ell~g~~Pf~~~~------~~~~~~~i~ 231 (345)
T 1xjd_A 175 ----------------TNTFCGTPDYIAPEILLG-QKYNHSVDWWSFGVLLYEMLIGQSPFHGQD------EEELFHSIR 231 (345)
T ss_dssp ----------------BCCCCSCGGGCCHHHHTT-CCBCTHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHH
T ss_pred ----------------ccCCCCCcccCChhhhcC-CCCCChhhhHHHHHHHHHHhcCCCCCCCCC------HHHHHHHHH
Confidence 123457999999999765 678999999999999999999999996432 112222222
Q ss_pred hhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChH-HHH
Q 005226 648 KGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMK-NVS 699 (707)
Q Consensus 648 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~-~v~ 699 (707)
.. ...+.. .....+.+++.+|+..||++||++. +|.
T Consensus 232 ~~---~~~~p~-------------~~s~~~~~li~~lL~~dp~~R~~~~~~i~ 268 (345)
T 1xjd_A 232 MD---NPFYPR-------------WLEKEAKDLLVKLFVREPEKRLGVRGDIR 268 (345)
T ss_dssp HC---CCCCCT-------------TSCHHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred hC---CCCCCc-------------ccCHHHHHHHHHHhcCCHhHcCCChHHHH
Confidence 11 111111 1224577999999999999999997 554
No 121
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=2.7e-39 Score=344.22 Aligned_cols=241 Identities=23% Similarity=0.388 Sum_probs=191.9
Q ss_pred cceecccCeeEEEEEEe-CCCceEEEEEcCCCc---hhhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCcceEEEEeecC
Q 005226 412 AYVLGKSGLGIVYKVVL-GNGIPVAVRRLGEGG---EQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISN 487 (707)
Q Consensus 412 ~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~ 487 (707)
.+.||+|+||+||+|.. .+++.||||++.... ....+.+.+|++++++++||||+++++++..++..++||||+.
T Consensus 59 ~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~- 137 (348)
T 1u5q_A 59 LREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCL- 137 (348)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCS-
T ss_pred eeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEEecCC-
Confidence 34799999999999996 578999999986542 2334678999999999999999999999999999999999997
Q ss_pred CChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEecccccccccccCCC
Q 005226 488 GNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNN 567 (707)
Q Consensus 488 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~~~ 567 (707)
|+|.+++.... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++.....
T Consensus 138 g~l~~~l~~~~----~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~--- 207 (348)
T 1u5q_A 138 GSASDLLEVHK----KPLQEVEIAAVTHGALQGLAYLHS---HNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA--- 207 (348)
T ss_dssp EEHHHHHHHHT----SCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSB---
T ss_pred CCHHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEECCCCCEEEeeccCceecCCC---
Confidence 68888886432 358999999999999999999999 89999999999999999999999999999765421
Q ss_pred CCCCCCCcCCCCCCCCccccccCccccCCCCCC--CCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchhHHHH
Q 005226 568 PSSSGGFMGGALPYMKPVQTEKTNNYRAPEARV--PGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVRW 645 (707)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~ 645 (707)
....||+.|+|||++. ....++.++|||||||++|||++|+.||..... ......
T Consensus 208 -----------------~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~------~~~~~~ 264 (348)
T 1u5q_A 208 -----------------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA------MSALYH 264 (348)
T ss_dssp -----------------CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH------HHHHHH
T ss_pred -----------------CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCh------HHHHHH
Confidence 1234689999999864 246788999999999999999999999864321 111111
Q ss_pred HHhhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 005226 646 VKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSE 700 (707)
Q Consensus 646 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~ 700 (707)
+. ....+ ... .......+.+++.+||+.||++|||++++++
T Consensus 265 ~~---~~~~~--~~~---------~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~ 305 (348)
T 1u5q_A 265 IA---QNESP--ALQ---------SGHWSEYFRNFVDSCLQKIPQDRPTSEVLLK 305 (348)
T ss_dssp HH---HSCCC--CCC---------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred HH---hcCCC--CCC---------CCCCCHHHHHHHHHHcccChhhCcCHHHHhh
Confidence 11 11111 000 0112245678999999999999999999875
No 122
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=6.5e-39 Score=341.68 Aligned_cols=243 Identities=25% Similarity=0.330 Sum_probs=180.6
Q ss_pred ceecccCeeEEEEEEeC-CCceEEEEEcCCCchhhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCcceEEEEeecCCChH
Q 005226 413 YVLGKSGLGIVYKVVLG-NGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLA 491 (707)
Q Consensus 413 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL~ 491 (707)
+.||+|+||.||+|... +++.||||++.... ..+.+.+|++++++++||||+++++++.+++..++||||+++|+|.
T Consensus 59 ~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~ 136 (349)
T 2w4o_A 59 SELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELF 136 (349)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHH
T ss_pred eEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEeCCCCCHH
Confidence 47999999999999976 57889999987643 2366889999999999999999999999999999999999999999
Q ss_pred HHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcC---CCCeEEecccccccccccCCCC
Q 005226 492 NALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDN---DFQPYISDFGLSRLINITGNNP 568 (707)
Q Consensus 492 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~---~~~~kl~DfGla~~~~~~~~~~ 568 (707)
+++.... .+++..+..++.||+.||+|||+ .+|+||||||+||+++. ++.+||+|||+++........
T Consensus 137 ~~l~~~~-----~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~- 207 (349)
T 2w4o_A 137 DRIVEKG-----YYSERDAADAVKQILEAVAYLHE---NGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLM- 207 (349)
T ss_dssp HHHTTCS-----SCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEESSSSTTCCEEECCCC------------
T ss_pred HHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCcccEEEecCCCCCCEEEccCccccccCccccc-
Confidence 9997643 58999999999999999999999 89999999999999975 889999999999865422110
Q ss_pred CCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchhHHHHHHh
Q 005226 569 SSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVRWVKK 648 (707)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~ 648 (707)
....||+.|+|||++.. ..++.++|||||||++|||++|+.||...... ......+..
T Consensus 208 ----------------~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-----~~~~~~i~~ 265 (349)
T 2w4o_A 208 ----------------KTVCGTPGYCAPEILRG-CAYGPEVDMWSVGIITYILLCGFEPFYDERGD-----QFMFRRILN 265 (349)
T ss_dssp ---------------------CGGGSCHHHHTT-CCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCH-----HHHHHHHHT
T ss_pred ----------------ccccCCCCccCHHHhcC-CCCCcccchHHHHHHHHHHHhCCCCCCCCccc-----HHHHHHHHh
Confidence 22456999999999765 67899999999999999999999999643221 111111111
Q ss_pred hccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 005226 649 GFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSE 700 (707)
Q Consensus 649 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~ 700 (707)
. ... ...+ ........+.+++.+|++.||++|||+.++++
T Consensus 266 ~---~~~---~~~~------~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 305 (349)
T 2w4o_A 266 C---EYY---FISP------WWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQ 305 (349)
T ss_dssp T---CCC---CCTT------TTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred C---CCc---cCCc------hhhhCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 1 100 0000 00122346789999999999999999999986
No 123
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=5.5e-39 Score=330.50 Aligned_cols=240 Identities=23% Similarity=0.324 Sum_probs=174.6
Q ss_pred ceecccCeeEEEEEEe-CCCceEEEEEcCCCc---hhhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCcceEEEEeecCC
Q 005226 413 YVLGKSGLGIVYKVVL-GNGIPVAVRRLGEGG---EQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNG 488 (707)
Q Consensus 413 ~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~g 488 (707)
+.||+|+||.||+|.. .+++.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++||||+ ++
T Consensus 19 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~-~~ 97 (275)
T 2eue_A 19 KTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA-GN 97 (275)
T ss_dssp C---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEEEECC-CE
T ss_pred EEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEEehhc-CC
Confidence 4799999999999985 478999999987642 223467889999999999999999999999999999999999 77
Q ss_pred ChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEecccccccccccCCCC
Q 005226 489 NLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNP 568 (707)
Q Consensus 489 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~ 568 (707)
+|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++........
T Consensus 98 ~l~~~~~~~~-----~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~- 168 (275)
T 2eue_A 98 ELFDYIVQRD-----KMSEQEARRFFQQIISAVEYCHR---HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFL- 168 (275)
T ss_dssp EHHHHHHTSS-----SCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEECTTSCEEECCSSCC----------
T ss_pred cHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHH---CCCeeccCChHhEEECCCCCEEEeecccceeccCcccc-
Confidence 8999887643 58999999999999999999999 89999999999999999999999999999765422111
Q ss_pred CCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchhHHHHHHh
Q 005226 569 SSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVRWVKK 648 (707)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~ 648 (707)
....||+.|+|||.+......+.++||||||+++|||++|+.||.... .......+..
T Consensus 169 ----------------~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~------~~~~~~~~~~ 226 (275)
T 2eue_A 169 ----------------KTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDES------IPVLFKNISN 226 (275)
T ss_dssp ----------------------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHH
T ss_pred ----------------cCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHh
Confidence 123468999999997764445789999999999999999999996422 1122222221
Q ss_pred hccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 005226 649 GFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSE 700 (707)
Q Consensus 649 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~ 700 (707)
. ...+.. .....+.+++.+|++.||++|||++|+++
T Consensus 227 ~---~~~~~~-------------~~~~~~~~li~~~l~~dP~~Rps~~e~l~ 262 (275)
T 2eue_A 227 G---VYTLPK-------------FLSPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp T---CCCCCT-------------TSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred C---CCCCCc-------------cCCHHHHHHHHHHhhcCHhHCCCHHHHhh
Confidence 1 111111 12245678999999999999999999975
No 124
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=5.7e-39 Score=330.70 Aligned_cols=244 Identities=21% Similarity=0.270 Sum_probs=195.8
Q ss_pred cceecccCeeEEEEEEeC-CCceEEEEEcCCCchhhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCcceEEEEeecCCCh
Q 005226 412 AYVLGKSGLGIVYKVVLG-NGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNL 490 (707)
Q Consensus 412 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL 490 (707)
.+.||+|+||.||+|... ++..||+|++........+.+.+|++++++++||||+++++++.+++..++||||+++++|
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 93 (277)
T 3f3z_A 14 ENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGEL 93 (277)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCCSCBH
T ss_pred eeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEeccCCCcH
Confidence 347999999999999975 5778999998776555567899999999999999999999999999999999999999999
Q ss_pred HHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEE---cCCCCeEEecccccccccccCCC
Q 005226 491 ANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILL---DNDFQPYISDFGLSRLINITGNN 567 (707)
Q Consensus 491 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll---~~~~~~kl~DfGla~~~~~~~~~ 567 (707)
.+++.... .+++..+..|+.|++.||+|||+ ++|+||||||+||++ +.++.+||+|||++.........
T Consensus 94 ~~~~~~~~-----~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~~~ 165 (277)
T 3f3z_A 94 FERVVHKR-----VFRESDAARIMKDVLSAVAYCHK---LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMM 165 (277)
T ss_dssp HHHHHHHC-----SCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTSCB
T ss_pred HHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHH---CCccCCCCCHHHEEEecCCCCCcEEEEecccceeccCccch
Confidence 99997643 58999999999999999999999 899999999999999 78899999999999865422211
Q ss_pred CCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchhHHHHHH
Q 005226 568 PSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVRWVK 647 (707)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~ 647 (707)
....||+.|+|||++.. .++.++||||||+++|||++|+.||..... ......+.
T Consensus 166 -----------------~~~~~t~~y~aPE~~~~--~~~~~~Di~slG~~l~~l~~g~~p~~~~~~------~~~~~~~~ 220 (277)
T 3f3z_A 166 -----------------RTKVGTPYYVSPQVLEG--LYGPECDEWSAGVMMYVLLCGYPPFSAPTD------SEVMLKIR 220 (277)
T ss_dssp -----------------CCCCSCTTTCCHHHHTT--CBCTTHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHH
T ss_pred -----------------hccCCCCCccChHHhcc--cCCchhhehhHHHHHHHHHHCCCCCCCCCH------HHHHHHHH
Confidence 22346899999998653 488999999999999999999999965321 12222221
Q ss_pred hhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 005226 648 KGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSE 700 (707)
Q Consensus 648 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~ 700 (707)
.. ... ...... ......+.+++.+|++.||++||++.++++
T Consensus 221 ~~---~~~---~~~~~~------~~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 261 (277)
T 3f3z_A 221 EG---TFT---FPEKDW------LNVSPQAESLIRRLLTKSPKQRITSLQALE 261 (277)
T ss_dssp HC---CCC---CCHHHH------TTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred hC---CCC---CCchhh------hcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 11 100 000000 112356789999999999999999999975
No 125
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=1.9e-39 Score=348.22 Aligned_cols=246 Identities=16% Similarity=0.213 Sum_probs=193.1
Q ss_pred ceecccCeeEEEEEE------eCCCceEEEEEcCCCchhhHHHHHHHHHHHHhcC---CCceeeeEEEEEcCCcceEEEE
Q 005226 413 YVLGKSGLGIVYKVV------LGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVK---HPNIVKLRAYYWAPDEKLLISD 483 (707)
Q Consensus 413 ~~lG~G~~g~Vy~~~------~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---H~niv~l~~~~~~~~~~~lV~e 483 (707)
+.||+|+||+||+|. ..+++.||||+++.... .++.+|++++++++ |+||+++++++..++..++|||
T Consensus 71 ~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~~~~lv~e 147 (365)
T 3e7e_A 71 HLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANP---WEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNGSVLVGE 147 (365)
T ss_dssp EEEEECSSEEEEEEEC-------CCCCEEEEEESSCCH---HHHHHHHHHHHHSCGGGGGGBCCEEEEEECSSCEEEEEC
T ss_pred EEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCCh---hHHHHHHHHHHHhhhhhhhhhhhhheeeecCCCcEEEEe
Confidence 489999999999994 45789999999976543 56778888888886 9999999999999999999999
Q ss_pred eecCCChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcC-----------CCCeEE
Q 005226 484 FISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDN-----------DFQPYI 552 (707)
Q Consensus 484 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~-----------~~~~kl 552 (707)
|+++|+|.++++.........++|..++.|+.||+.||+|||+ .+||||||||+|||++. ++.+||
T Consensus 148 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~---~~ivHrDiKp~NIll~~~~~~~~~~~~~~~~~kl 224 (365)
T 3e7e_A 148 LYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHD---CEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLAL 224 (365)
T ss_dssp CCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCSGGGEEECGGGTCC------CTTEEE
T ss_pred ccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhh---CCeecCCCCHHHEEecccccCccccccccCCEEE
Confidence 9999999999975332233469999999999999999999999 89999999999999998 899999
Q ss_pred ecccccccccccCCCCCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q 005226 553 SDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPT 632 (707)
Q Consensus 553 ~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~ 632 (707)
+|||+|+.+........ .....||..|+|||++.. ..++.++|||||||++|||+||+.||....
T Consensus 225 ~DFG~a~~~~~~~~~~~--------------~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~elltg~~pf~~~~ 289 (365)
T 3e7e_A 225 IDLGQSIDMKLFPKGTI--------------FTAKCETSGFQCVEMLSN-KPWNYQIDYFGVAATVYCMLFGTYMKVKNE 289 (365)
T ss_dssp CCCTTCEEGGGSCTTEE--------------ECCSSCTTSCCCHHHHTT-CCBSTHHHHHHHHHHHHHHHHSSCCCEEEE
T ss_pred eeCchhhhhhccCCCce--------------eeeecCCCCCCChHHhcC-CCCCccccHHHHHHHHHHHHhCCCccccCC
Confidence 99999976542211110 123457999999999765 668999999999999999999999985432
Q ss_pred CCCCccchhHHHHHHhhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCC-CChHHHHHHHHhh
Q 005226 633 TSTSIEVPDLVRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVR-PRMKNVSENLERI 705 (707)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~R-Ps~~~v~~~L~~i 705 (707)
... ......+... .....+.+++..|++.+|.+| |+++++.+.|+++
T Consensus 290 ~~~--------------~~~~~~~~~~------------~~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~ 337 (365)
T 3e7e_A 290 GGE--------------CKPEGLFRRL------------PHLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKV 337 (365)
T ss_dssp TTE--------------EEECSCCTTC------------SSHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHH
T ss_pred CCc--------------eeechhcccc------------CcHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHH
Confidence 210 0000000000 112345678889999999988 6788888877764
No 126
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=5.8e-39 Score=354.18 Aligned_cols=241 Identities=27% Similarity=0.362 Sum_probs=196.6
Q ss_pred ceecccCeeEEEEEEeC-CCceEEEEEcCCCch---hhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCcceEEEEeecCC
Q 005226 413 YVLGKSGLGIVYKVVLG-NGIPVAVRRLGEGGE---QRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNG 488 (707)
Q Consensus 413 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~g 488 (707)
+.||+|+||.||+|... +|+.||||++..... .....+.+|+++++.++||||+++++++.+.+..++||||+++|
T Consensus 22 ~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~E~~~gg 101 (476)
T 2y94_A 22 DTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGG 101 (476)
T ss_dssp EEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCSSE
T ss_pred EEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCCCC
Confidence 47999999999999975 789999999865422 23467899999999999999999999999999999999999999
Q ss_pred ChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEecccccccccccCCCC
Q 005226 489 NLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNP 568 (707)
Q Consensus 489 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~ 568 (707)
+|.+++.... .+++..+..++.||+.||+|||+ .+|+||||||+||+++.++.+||+|||+++........
T Consensus 102 ~L~~~l~~~~-----~l~~~~~~~i~~qi~~aL~~LH~---~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~~~- 172 (476)
T 2y94_A 102 ELFDYICKNG-----RLDEKESRRLFQQILSGVDYCHR---HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFL- 172 (476)
T ss_dssp EHHHHTTSSS-----SCCHHHHHHHHHHHHHHHHHHHT---TTEECSCCSGGGEEECTTCCEEECCCSSCEECCTTCCB-
T ss_pred cHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHH---CCCCcccccHHHEEEecCCCeEEEeccchhhccccccc-
Confidence 9999997543 59999999999999999999999 89999999999999999999999999999876432111
Q ss_pred CCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchhHHHHHHh
Q 005226 569 SSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVRWVKK 648 (707)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~ 648 (707)
....||+.|+|||++......+.++|||||||++|||++|+.||..... ..+...+..
T Consensus 173 ----------------~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~------~~~~~~i~~ 230 (476)
T 2y94_A 173 ----------------RTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHV------PTLFKKICD 230 (476)
T ss_dssp ----------------CCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSS------HHHHHHHHT
T ss_pred ----------------cccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCH------HHHHHHHhc
Confidence 2235799999999977644557899999999999999999999975321 222222222
Q ss_pred hccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 005226 649 GFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSE 700 (707)
Q Consensus 649 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~ 700 (707)
..... .. .....+.+++.+||+.||++|||++++++
T Consensus 231 ~~~~~---p~-------------~~s~~~~~Li~~~L~~dP~~Rpt~~eil~ 266 (476)
T 2y94_A 231 GIFYT---PQ-------------YLNPSVISLLKHMLQVDPMKRATIKDIRE 266 (476)
T ss_dssp TCCCC---CT-------------TCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CCcCC---Cc-------------cCCHHHHHHHHHHcCCCchhCcCHHHHHh
Confidence 11110 11 11235678999999999999999999986
No 127
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=1e-38 Score=331.27 Aligned_cols=241 Identities=22% Similarity=0.360 Sum_probs=190.6
Q ss_pred ceecccCeeEEEEEEeC-CCceEEEEEcCCC--chhhHHHHHHHHHHHHhcCCCceeeeEEEEEc----CCcceEEEEee
Q 005226 413 YVLGKSGLGIVYKVVLG-NGIPVAVRRLGEG--GEQRHREFVTEVQAIAKVKHPNIVKLRAYYWA----PDEKLLISDFI 485 (707)
Q Consensus 413 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~----~~~~~lV~e~~ 485 (707)
..||+|+||+||+|... ++..||+|.+... .....+.+.+|+.++++++||||+++++++.. ....++||||+
T Consensus 32 ~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~ 111 (290)
T 1t4h_A 32 IEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELM 111 (290)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEEECC
T ss_pred eeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEEEEEec
Confidence 37999999999999864 6788999998654 33445789999999999999999999999875 34578999999
Q ss_pred cCCChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCC--ceecCCCCCCeEEc-CCCCeEEeccccccccc
Q 005226 486 SNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRK--FVHGDIKPSNILLD-NDFQPYISDFGLSRLIN 562 (707)
Q Consensus 486 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~--iiHrDlk~~NIll~-~~~~~kl~DfGla~~~~ 562 (707)
++|+|.+++.... .+++..+..|+.||+.||+|||+ .+ |+||||||+||+++ .++.+||+|||++....
T Consensus 112 ~~~~L~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH~---~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~ 183 (290)
T 1t4h_A 112 TSGTLKTYLKRFK-----VMKIKVLRSWCRQILKGLQFLHT---RTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR 183 (290)
T ss_dssp CSCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHT---SSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCC
T ss_pred CCCCHHHHHHHcc-----CCCHHHHHHHHHHHHHHHHHHHc---CCCCEEECCCCHHHEEEECCCCCEEEeeCCCccccc
Confidence 9999999997643 58999999999999999999999 67 99999999999998 78999999999996543
Q ss_pred ccCCCCCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchhH
Q 005226 563 ITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDL 642 (707)
Q Consensus 563 ~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~ 642 (707)
... .....||+.|+|||++. ..++.++||||||+++|||++|+.||..... ....
T Consensus 184 ~~~------------------~~~~~~t~~y~aPE~~~--~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~-----~~~~ 238 (290)
T 1t4h_A 184 ASF------------------AKAVIGTPEFMAPEMYE--EKYDESVDVYAFGMCMLEMATSEYPYSECQN-----AAQI 238 (290)
T ss_dssp TTS------------------BEESCSSCCCCCGGGGG--TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSS-----HHHH
T ss_pred ccc------------------cccccCCcCcCCHHHHh--ccCCCcchHHHHHHHHHHHHhCCCCCCCcCc-----HHHH
Confidence 111 12345789999999865 4588999999999999999999999964321 1122
Q ss_pred HHHHHhhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 005226 643 VRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSE 700 (707)
Q Consensus 643 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~ 700 (707)
...+....... .. .......+.+++.+||+.||++|||++++++
T Consensus 239 ~~~~~~~~~~~-----~~---------~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 282 (290)
T 1t4h_A 239 YRRVTSGVKPA-----SF---------DKVAIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp HHHHTTTCCCG-----GG---------GGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHHHhccCCcc-----cc---------CCCCCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 22222111100 00 1111245789999999999999999999986
No 128
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=2.8e-39 Score=340.68 Aligned_cols=255 Identities=26% Similarity=0.388 Sum_probs=201.0
Q ss_pred cceecccCeeEEEEEEeC------CCceEEEEEcCCCc-hhhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCcceEEEEe
Q 005226 412 AYVLGKSGLGIVYKVVLG------NGIPVAVRRLGEGG-EQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDF 484 (707)
Q Consensus 412 ~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~ 484 (707)
.+.||+|+||.||+|... ++..||||.+.... ......|.+|++++++++||||+++++++.+++..++||||
T Consensus 30 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 109 (322)
T 1p4o_A 30 SRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMEL 109 (322)
T ss_dssp EEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred eeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccCCccEEEEEe
Confidence 358999999999999864 36889999997653 33446799999999999999999999999999999999999
Q ss_pred ecCCChHHHHhCCCC-----CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEecccccc
Q 005226 485 ISNGNLANALRGRNG-----QPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSR 559 (707)
Q Consensus 485 ~~~gsL~~~l~~~~~-----~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~ 559 (707)
+++|+|.+++..... .....+++..+++++.||+.||+|||+ ++|+||||||+||+++.++.+||+|||+++
T Consensus 110 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~NIli~~~~~~kl~Dfg~~~ 186 (322)
T 1p4o_A 110 MTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTR 186 (322)
T ss_dssp CTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHH---TTCBCSCCSGGGEEECTTCCEEECCTTCCC
T ss_pred CCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHH---CCCccCCCccceEEEcCCCeEEECcCcccc
Confidence 999999999975320 112357999999999999999999999 899999999999999999999999999998
Q ss_pred cccccCCCCCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCCCcc
Q 005226 560 LINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTSIE 638 (707)
Q Consensus 560 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~ellt-g~~P~~~~~~~~~~~ 638 (707)
......... ......+|+.|+|||++.. ..++.++||||||+++|||+| |+.||....
T Consensus 187 ~~~~~~~~~--------------~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~el~~~g~~p~~~~~------ 245 (322)
T 1p4o_A 187 DIYETDYYR--------------KGGKGLLPVRWMSPESLKD-GVFTTYSDVWSFGVVLWEIATLAEQPYQGLS------ 245 (322)
T ss_dssp GGGGGGCEE--------------GGGSSEECGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHHHTSCCTTTTSC------
T ss_pred ccccccccc--------------cccCCCCCCCccChhhhcc-CCCCchhhHHHHHHHHHHHHhcCCCccccCC------
Confidence 654322110 0122345788999998654 668899999999999999999 888886432
Q ss_pred chhHHHHHHhhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHHhh
Q 005226 639 VPDLVRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERI 705 (707)
Q Consensus 639 ~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~~L~~i 705 (707)
.......+........ .......+.+++.+||+.||.+||++.++++.|+++
T Consensus 246 ~~~~~~~~~~~~~~~~---------------~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~ 297 (322)
T 1p4o_A 246 NEQVLRFVMEGGLLDK---------------PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEE 297 (322)
T ss_dssp HHHHHHHHHTTCCCCC---------------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGG
T ss_pred HHHHHHHHHcCCcCCC---------------CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHh
Confidence 1222222222111110 012234578999999999999999999999999876
No 129
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=7.5e-39 Score=329.48 Aligned_cols=248 Identities=25% Similarity=0.301 Sum_probs=197.2
Q ss_pred cceecccCeeEEEEEEeC-CCceEEEEEcCCCc-hhhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCcceEEEEeecCCC
Q 005226 412 AYVLGKSGLGIVYKVVLG-NGIPVAVRRLGEGG-EQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGN 489 (707)
Q Consensus 412 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gs 489 (707)
.+.||+|+||.||+|... +++.||||++.... ....+.+.+|+.++++++||||+++++++.+++..++||||+++|+
T Consensus 12 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 91 (276)
T 2yex_A 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGE 91 (276)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTEE
T ss_pred EEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEEecCCCc
Confidence 347999999999999975 78999999986542 2344788999999999999999999999999999999999999999
Q ss_pred hHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEecccccccccccCCCCC
Q 005226 490 LANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPS 569 (707)
Q Consensus 490 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~ 569 (707)
|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++...........
T Consensus 92 L~~~l~~~~-----~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~ 163 (276)
T 2yex_A 92 LFDRIEPDI-----GMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL 163 (276)
T ss_dssp GGGGSBTTT-----BCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECC
T ss_pred HHHHHhhcc-----CCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCChHHEEEccCCCEEEeeCCCccccCCCcchhc
Confidence 999997542 58999999999999999999999 8999999999999999999999999999986542211000
Q ss_pred CCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchhHHHHHHhh
Q 005226 570 SSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVRWVKKG 649 (707)
Q Consensus 570 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~ 649 (707)
.....|+..|+|||.+......+.++||||||+++|||++|+.||...... ...+..|....
T Consensus 164 --------------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~----~~~~~~~~~~~ 225 (276)
T 2yex_A 164 --------------LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDS----CQEYSDWKEKK 225 (276)
T ss_dssp --------------BCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTT----SHHHHHHHTTC
T ss_pred --------------ccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchH----HHHHHHhhhcc
Confidence 022456899999999766444578999999999999999999999764322 12222332211
Q ss_pred ccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 005226 650 FEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSE 700 (707)
Q Consensus 650 ~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~ 700 (707)
.... . .......+.+++.+||+.||++|||+.++++
T Consensus 226 ~~~~-~--------------~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 261 (276)
T 2yex_A 226 TYLN-P--------------WKKIDSAPLALLHKILVENPSARITIPDIKK 261 (276)
T ss_dssp TTST-T--------------GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred cccC-c--------------hhhcCHHHHHHHHHHCCCCchhCCCHHHHhc
Confidence 1000 0 0112345678999999999999999999875
No 130
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.8e-39 Score=342.91 Aligned_cols=262 Identities=24% Similarity=0.416 Sum_probs=200.1
Q ss_pred cceecccCeeEEEEEEe-----CCCceEEEEEcCCCchhhHHHHHHHHHHHHhcCCCceeeeEEEEEcCC--cceEEEEe
Q 005226 412 AYVLGKSGLGIVYKVVL-----GNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPD--EKLLISDF 484 (707)
Q Consensus 412 ~~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~--~~~lV~e~ 484 (707)
.+.||+|+||.||++.. .+++.||||++........+.|.+|++++++++||||+++++++...+ ..++||||
T Consensus 46 ~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~ 125 (326)
T 2w1i_A 46 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEY 125 (326)
T ss_dssp EEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCEEEECC
T ss_pred eeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceEEEEEC
Confidence 34899999999999984 468899999998776666688999999999999999999999987654 67999999
Q ss_pred ecCCChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEeccccccccccc
Q 005226 485 ISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINIT 564 (707)
Q Consensus 485 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~~ 564 (707)
+++|+|.+++.... ..+++..++.++.||+.||+|||+ .+|+||||||+||+++.++.+||+|||+++.....
T Consensus 126 ~~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~~~ 198 (326)
T 2w1i_A 126 LPYGSLRDYLQKHK----ERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQD 198 (326)
T ss_dssp CTTCBHHHHHHHST----TSSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEEEETTEEEECCCTTCEECCSS
T ss_pred CCCCCHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHh---CCEeccCCCcceEEEcCCCcEEEecCcchhhcccc
Confidence 99999999998653 258999999999999999999999 89999999999999999999999999999876532
Q ss_pred CCCCCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchhHHH
Q 005226 565 GNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVR 644 (707)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~ 644 (707)
..... ......++..|+|||.+.. ..++.++||||||+++|||+||+.|+.... ..+.+
T Consensus 199 ~~~~~-------------~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~el~tg~~~~~~~~-------~~~~~ 257 (326)
T 2w1i_A 199 KEYYK-------------VKEPGESPIFWYAPESLTE-SKFSVASDVWSFGVVLYELFTYIEKSKSPP-------AEFMR 257 (326)
T ss_dssp CSEEE-------------CSSCCSCCGGGCCHHHHHH-CEEEHHHHHHHHHHHHHHHHHTTCGGGSHH-------HHHHH
T ss_pred ccccc-------------cccCCCCceeEECchhhcC-CCCCchhhHHHHHHHHHHHHhcCCCCCCCH-------HHHHH
Confidence 21100 0122345778999998654 567899999999999999999999875321 00111
Q ss_pred HHHhhccccCCCchhchHH----HHhh---hhhHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHHhhc
Q 005226 645 WVKKGFEEENPLSDMVDAM----LLQE---VHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERIG 706 (707)
Q Consensus 645 ~~~~~~~~~~~~~~~~d~~----l~~~---~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~~L~~i~ 706 (707)
.. ..... .+..... +... ........++.+++.+||+.||++||++.+|++.|++++
T Consensus 258 ~~----~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~ 321 (326)
T 2w1i_A 258 MI----GNDKQ-GQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIR 321 (326)
T ss_dssp HH----CTTCC-THHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred hh----ccccc-hhhhHHHHHHHhhcCCCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 00 00000 0000000 0000 001123356889999999999999999999999999875
No 131
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=3.3e-39 Score=343.36 Aligned_cols=245 Identities=21% Similarity=0.286 Sum_probs=187.7
Q ss_pred ceecccCeeEEEEEEeCCCceEEEEEcCCC--chhhHHHHHHHHHHHHhcCC--CceeeeEEEEEcCCcceEEEEeecCC
Q 005226 413 YVLGKSGLGIVYKVVLGNGIPVAVRRLGEG--GEQRHREFVTEVQAIAKVKH--PNIVKLRAYYWAPDEKLLISDFISNG 488 (707)
Q Consensus 413 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H--~niv~l~~~~~~~~~~~lV~e~~~~g 488 (707)
+.||+|+||.||++...++..||||++... .....+.+.+|++++++++| |||+++++++.+++..++||| +.+|
T Consensus 15 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e-~~~~ 93 (343)
T 3dbq_A 15 KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNI 93 (343)
T ss_dssp EEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEC-CCSE
T ss_pred EEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEEEe-CCCC
Confidence 489999999999999988999999998654 33345789999999999976 999999999999999999999 5688
Q ss_pred ChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEecccccccccccCCCC
Q 005226 489 NLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNP 568 (707)
Q Consensus 489 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~ 568 (707)
+|.+++.... .+++..+..|+.||+.||+|||+ .+|+||||||+|||++ ++.+||+|||+++.........
T Consensus 94 ~L~~~l~~~~-----~~~~~~~~~i~~qi~~al~~lH~---~~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~~~~ 164 (343)
T 3dbq_A 94 DLNSWLKKKK-----SIDPWERKSYWKNMLEAVHTIHQ---HGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSV 164 (343)
T ss_dssp EHHHHHHHSC-----CCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEE-TTEEEECCCSSSCCC-------
T ss_pred CHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCcceEEEE-CCcEEEeecccccccCcccccc
Confidence 9999998653 58999999999999999999999 8999999999999997 5789999999998664322110
Q ss_pred CCCCCCcCCCCCCCCccccccCccccCCCCCCC----------CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCcc
Q 005226 569 SSSGGFMGGALPYMKPVQTEKTNNYRAPEARVP----------GNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIE 638 (707)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~----------~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~ 638 (707)
......||+.|+|||++.. ...++.++|||||||++|||++|+.||......
T Consensus 165 --------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~---- 226 (343)
T 3dbq_A 165 --------------VKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ---- 226 (343)
T ss_dssp -------------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSH----
T ss_pred --------------cCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhH----
Confidence 0123457999999998642 256789999999999999999999999643211
Q ss_pred chhHHHHHHhhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 005226 639 VPDLVRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSE 700 (707)
Q Consensus 639 ~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~ 700 (707)
...+...+........ .. .....+.+++.+||+.||++|||+.++++
T Consensus 227 ~~~~~~~~~~~~~~~~--~~-------------~~~~~l~~li~~~L~~dp~~Rpt~~e~l~ 273 (343)
T 3dbq_A 227 ISKLHAIIDPNHEIEF--PD-------------IPEKDLQDVLKCCLKRDPKQRISIPELLA 273 (343)
T ss_dssp HHHHHHHHCTTSCCCC--CC-------------CSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHHHHHHhcCCcccCC--cc-------------cCCHHHHHHHHHHcCCChhHCCCHHHHHh
Confidence 1111111111111000 01 11235679999999999999999999975
No 132
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=1.3e-39 Score=355.64 Aligned_cols=249 Identities=19% Similarity=0.208 Sum_probs=194.7
Q ss_pred cceecccCeeEEEEEEeC-CCceEEEEEcCCCch---hhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCcceEEEEeecC
Q 005226 412 AYVLGKSGLGIVYKVVLG-NGIPVAVRRLGEGGE---QRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISN 487 (707)
Q Consensus 412 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~ 487 (707)
.++||+|+||+||+|... +++.||+|++++... .....+.+|+.++..++||||++++++|.+++..++||||+++
T Consensus 79 ~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lV~Ey~~g 158 (437)
T 4aw2_A 79 LKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVG 158 (437)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEECCCTT
T ss_pred EEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCEEEEEEecCCC
Confidence 358999999999999976 578899999875321 2224588999999999999999999999999999999999999
Q ss_pred CChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEecccccccccccCCC
Q 005226 488 GNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNN 567 (707)
Q Consensus 488 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~~~ 567 (707)
|+|.+++.... ..+++..+..++.||+.||+|||+ .+||||||||+|||++.++.+||+|||+|+........
T Consensus 159 g~L~~~l~~~~----~~l~e~~~~~~~~qi~~aL~~LH~---~giiHrDLKp~NILl~~~g~vkL~DFGla~~~~~~~~~ 231 (437)
T 4aw2_A 159 GDLLTLLSKFE----DRLPEEMARFYLAEMVIAIDSVHQ---LHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTV 231 (437)
T ss_dssp CBHHHHHHTTT----TCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSCE
T ss_pred CcHHHHHHHcc----CCCCHHHHHHHHHHHHHHHHHHHh---CCeEecccCHHHeeEcCCCCEEEcchhhhhhcccCCCc
Confidence 99999998642 359999999999999999999999 89999999999999999999999999999765432211
Q ss_pred CCCCCCCcCCCCCCCCccccccCccccCCCCCC----CCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchhHH
Q 005226 568 PSSSGGFMGGALPYMKPVQTEKTNNYRAPEARV----PGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLV 643 (707)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~----~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~~ 643 (707)
. .....||+.|+|||++. ....++.++|||||||++|||++|+.||..... .+..
T Consensus 232 ~---------------~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~------~~~~ 290 (437)
T 4aw2_A 232 Q---------------SSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESL------VETY 290 (437)
T ss_dssp E---------------CCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSH------HHHH
T ss_pred c---------------cccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCCh------hHHH
Confidence 1 12346799999999975 235688999999999999999999999975321 1222
Q ss_pred HHHHhhc-cccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCC--CCChHHHHH
Q 005226 644 RWVKKGF-EEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEV--RPRMKNVSE 700 (707)
Q Consensus 644 ~~~~~~~-~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~--RPs~~~v~~ 700 (707)
..+.... ....+ .. .......+.+++.+|+..+|++ ||+++|+++
T Consensus 291 ~~i~~~~~~~~~p--~~----------~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~ 338 (437)
T 4aw2_A 291 GKIMNHKERFQFP--TQ----------VTDVSENAKDLIRRLICSREHRLGQNGIEDFKK 338 (437)
T ss_dssp HHHHTHHHHCCCC--SS----------CCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHT
T ss_pred HhhhhccccccCC--cc----------cccCCHHHHHHHHHHhcccccccCCCCHHHHhC
Confidence 1111100 00000 00 0112345678999999888888 999999875
No 133
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=1.3e-39 Score=335.65 Aligned_cols=245 Identities=27% Similarity=0.441 Sum_probs=192.0
Q ss_pred cceecccCeeEEEEEEeCCCceEEEEEcCCCchhhHHHHHHHHHHHHhcCCCceeeeEEEEEcC-CcceEEEEeecCCCh
Q 005226 412 AYVLGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWAP-DEKLLISDFISNGNL 490 (707)
Q Consensus 412 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~-~~~~lV~e~~~~gsL 490 (707)
.+.||+|+||.||++.. +|..||||.++... ..+.|.+|++++++++||||+++++++.+. +..++||||+++|+|
T Consensus 26 ~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~~~~L 102 (278)
T 1byg_A 26 LQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSL 102 (278)
T ss_dssp EEEEEECSSCEEEEEEE-TTEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCCTTEEH
T ss_pred EeEEecCCCceEEEEEE-cCCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEecCCCCCH
Confidence 34899999999999988 58899999997643 346789999999999999999999997655 478999999999999
Q ss_pred HHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEecccccccccccCCCCCC
Q 005226 491 ANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSS 570 (707)
Q Consensus 491 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~~ 570 (707)
.+++.... ...+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+++......
T Consensus 103 ~~~l~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~----- 171 (278)
T 1byg_A 103 VDYLRSRG---RSVLGGDCLLKFSLDVCEAMEYLEG---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ----- 171 (278)
T ss_dssp HHHHHHHH---HHHCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTSCEEECCCCC-------------
T ss_pred HHHHHhcc---cccCCHHHHHHHHHHHHHHHHHHHh---CCccccCCCcceEEEeCCCcEEEeeccccccccccc-----
Confidence 99997542 1238899999999999999999999 899999999999999999999999999987544211
Q ss_pred CCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCCCccchhHHHHHHhh
Q 005226 571 SGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTSIEVPDLVRWVKKG 649 (707)
Q Consensus 571 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~ 649 (707)
....++..|+|||.+.. ..++.++||||||+++|||+| |+.||..... .+....+...
T Consensus 172 --------------~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~------~~~~~~~~~~ 230 (278)
T 1byg_A 172 --------------DTGKLPVKWTAPEALRE-KKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL------KDVVPRVEKG 230 (278)
T ss_dssp ------------------CCTTTSCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCG------GGHHHHHTTT
T ss_pred --------------cCCCccccccCHHHhCC-CCCCchhcHHHHHHHHHHHHhCCCCCCCCCCH------HHHHHHHhcC
Confidence 12234788999998654 677899999999999999998 9999865321 2233333222
Q ss_pred ccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHHhhc
Q 005226 650 FEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERIG 706 (707)
Q Consensus 650 ~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~~L~~i~ 706 (707)
..... .......+.+++.+||+.||++||++.++++.|++++
T Consensus 231 ~~~~~---------------~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~ 272 (278)
T 1byg_A 231 YKMDA---------------PDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIK 272 (278)
T ss_dssp CCCCC---------------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCCC---------------cccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHH
Confidence 11111 0122345789999999999999999999999999875
No 134
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=5.2e-39 Score=347.51 Aligned_cols=245 Identities=21% Similarity=0.289 Sum_probs=188.6
Q ss_pred ceecccCeeEEEEEEeCCCceEEEEEcCCC--chhhHHHHHHHHHHHHhcC--CCceeeeEEEEEcCCcceEEEEeecCC
Q 005226 413 YVLGKSGLGIVYKVVLGNGIPVAVRRLGEG--GEQRHREFVTEVQAIAKVK--HPNIVKLRAYYWAPDEKLLISDFISNG 488 (707)
Q Consensus 413 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~--H~niv~l~~~~~~~~~~~lV~e~~~~g 488 (707)
+.||+|+||.||+|...+++.||||++... .....+.+.+|++++++++ ||||+++++++..++..++||| +.+|
T Consensus 62 ~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~E-~~~~ 140 (390)
T 2zmd_A 62 KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNI 140 (390)
T ss_dssp EEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEE-CCSE
T ss_pred EEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEEe-cCCC
Confidence 489999999999999888999999998654 3344578999999999996 5999999999999999999999 5688
Q ss_pred ChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEecccccccccccCCCC
Q 005226 489 NLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNP 568 (707)
Q Consensus 489 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~ 568 (707)
+|.+++.... .+++..+..|+.||+.||+|||+ .+|+||||||+|||++ ++.+||+|||+++.........
T Consensus 141 ~L~~~l~~~~-----~~~~~~~~~i~~qi~~aL~~lH~---~~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~~~ 211 (390)
T 2zmd_A 141 DLNSWLKKKK-----SIDPWERKSYWKNMLEAVHTIHQ---HGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSV 211 (390)
T ss_dssp EHHHHHHHCS-----SCCHHHHHHHHHHHHHHHHHHHT---TTCCCCCCCGGGEEES-SSCEEECCCSSSCCC-------
T ss_pred CHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHHHEEEE-CCeEEEEecCccccccCCCccc
Confidence 9999998653 58999999999999999999999 8999999999999995 5899999999998764321110
Q ss_pred CCCCCCcCCCCCCCCccccccCccccCCCCCCC----------CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCcc
Q 005226 569 SSSGGFMGGALPYMKPVQTEKTNNYRAPEARVP----------GNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIE 638 (707)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~----------~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~ 638 (707)
......||+.|+|||++.. ...++.++|||||||++|||++|+.||......
T Consensus 212 --------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~---- 273 (390)
T 2zmd_A 212 --------------VKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ---- 273 (390)
T ss_dssp ----------------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCH----
T ss_pred --------------cCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHH----
Confidence 0123457999999998643 136889999999999999999999999643211
Q ss_pred chhHHHHHHhhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 005226 639 VPDLVRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSE 700 (707)
Q Consensus 639 ~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~ 700 (707)
...+...+....... +.. .....+.+++.+||+.||++||++.|+++
T Consensus 274 ~~~~~~~~~~~~~~~--~~~-------------~~~~~~~~li~~~L~~dP~~Rps~~ell~ 320 (390)
T 2zmd_A 274 ISKLHAIIDPNHEIE--FPD-------------IPEKDLQDVLKCCLKRDPKQRISIPELLA 320 (390)
T ss_dssp HHHHHHHHCTTSCCC--CCC-------------CSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHHHHHHhCccccCC--CCc-------------cchHHHHHHHHHHcccChhhCCCHHHHhh
Confidence 111111111111000 001 11245779999999999999999999975
No 135
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=1.7e-39 Score=340.65 Aligned_cols=248 Identities=22% Similarity=0.299 Sum_probs=186.7
Q ss_pred ceecccCeeEEEEEEe-CCCceEEEEEcCCCc---hhhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCcc----eEEEEe
Q 005226 413 YVLGKSGLGIVYKVVL-GNGIPVAVRRLGEGG---EQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEK----LLISDF 484 (707)
Q Consensus 413 ~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~----~lV~e~ 484 (707)
+.||+|+||.||+|.. .+++.||||++.... ......|.+|++++++++||||+++++++...... ++||||
T Consensus 18 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~lv~e~ 97 (311)
T 3ork_A 18 EILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEY 97 (311)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEEEEEEEC
T ss_pred EEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcccEEEEec
Confidence 4899999999999996 578999999987652 23346789999999999999999999999876554 999999
Q ss_pred ecCCChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEeccccccccccc
Q 005226 485 ISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINIT 564 (707)
Q Consensus 485 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~~ 564 (707)
+++|+|.++++... .+++..++.++.||+.||+|||+ ++|+||||||+||+++.++.+||+|||+++.....
T Consensus 98 ~~g~~L~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~ 169 (311)
T 3ork_A 98 VDGVTLRDIVHTEG-----PMTPKRAIEVIADACQALNFSHQ---NGIIHRDVKPANIMISATNAVKVMDFGIARAIADS 169 (311)
T ss_dssp CCEEEHHHHHHHHC-----SCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEETTSCEEECCCSCC------
T ss_pred CCCCCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHH---CCCCcCCCCHHHEEEcCCCCEEEeeccCccccccc
Confidence 99999999997543 58999999999999999999999 89999999999999999999999999999876533
Q ss_pred CCCCCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchhHHH
Q 005226 565 GNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVR 644 (707)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~ 644 (707)
..... ......||+.|+|||++.. ..++.++||||||+++|||+||+.||..... .+
T Consensus 170 ~~~~~-------------~~~~~~gt~~y~aPE~~~~-~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~---------~~ 226 (311)
T 3ork_A 170 GNSVT-------------QTAAVIGTAQYLSPEQARG-DSVDARSDVYSLGCVLYEVLTGEPPFTGDSP---------VS 226 (311)
T ss_dssp -------------------------CCTTCCHHHHHT-CCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH---------HH
T ss_pred ccccc-------------cccccCcCcccCCHHHhcC-CCCCchHhHHHHHHHHHHHHhCCCCCCCCCh---------HH
Confidence 21111 1123457999999999765 6788999999999999999999999964321 11
Q ss_pred HHHhhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 005226 645 WVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSE 700 (707)
Q Consensus 645 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~ 700 (707)
........... .+.. ........+.+++.+||+.||++||++.++++
T Consensus 227 ~~~~~~~~~~~-----~~~~----~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~ 273 (311)
T 3ork_A 227 VAYQHVREDPI-----PPSA----RHEGLSADLDAVVLKALAKNPENRYQTAAEMR 273 (311)
T ss_dssp HHHHHHHCCCC-----CHHH----HSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHH
T ss_pred HHHHHhcCCCC-----Cccc----ccCCCCHHHHHHHHHHHhcCHhhChhhHHHHH
Confidence 11111111110 0000 01123356789999999999999997666553
No 136
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=2.9e-39 Score=339.78 Aligned_cols=264 Identities=26% Similarity=0.338 Sum_probs=197.3
Q ss_pred ceecccCeeEEEEEEe-CCCceEEEEEcCCCchhhHHHHHHHHHHHHhcCCCceeeeEEEEEc----CCcceEEEEeecC
Q 005226 413 YVLGKSGLGIVYKVVL-GNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWA----PDEKLLISDFISN 487 (707)
Q Consensus 413 ~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~----~~~~~lV~e~~~~ 487 (707)
+.||+|+||.||++.. .+++.||||++........+.+.+|++++++++||||+++++++.. ....++||||+++
T Consensus 35 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~~ 114 (317)
T 2buj_A 35 QKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKR 114 (317)
T ss_dssp EEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEEEEECCTT
T ss_pred EEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEEEEEeCCC
Confidence 4899999999999996 5789999999876666666889999999999999999999999973 3467899999999
Q ss_pred CChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEecccccccccccCCC
Q 005226 488 GNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNN 567 (707)
Q Consensus 488 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~~~ 567 (707)
|+|.+++..... ....+++..++.++.||+.||+|||+ .+|+||||||+||+++.++.+||+|||+++........
T Consensus 115 ~~L~~~l~~~~~-~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~~~ 190 (317)
T 2buj_A 115 GTLWNEIERLKD-KGNFLTEDQILWLLLGICRGLEAIHA---KGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEG 190 (317)
T ss_dssp CBHHHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTSCEEECCCSSCEESCEEEES
T ss_pred CcHHHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEEcCCCCEEEEecCcchhccccccc
Confidence 999999975321 12469999999999999999999999 89999999999999999999999999998764321100
Q ss_pred CCCCCCCcCCCCCCCCccccccCccccCCCCCCCCC--CCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchhHHHH
Q 005226 568 PSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGN--RPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVRW 645 (707)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~ 645 (707)
... ...........||+.|+|||++.... .++.++||||||+++|||++|+.||...... .......
T Consensus 191 ~~~-------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~----~~~~~~~ 259 (317)
T 2buj_A 191 SRQ-------ALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQK----GDSVALA 259 (317)
T ss_dssp HHH-------HHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHT----TSCHHHH
T ss_pred ccc-------cccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcc----cchhhHH
Confidence 000 00000001234688999999876422 3688999999999999999999998531110 0011111
Q ss_pred HHhhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHHhhc
Q 005226 646 VKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERIG 706 (707)
Q Consensus 646 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~~L~~i~ 706 (707)
........ ........+.+++.+||+.||.+||++.++++.|+.+.
T Consensus 260 ~~~~~~~~---------------~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~ 305 (317)
T 2buj_A 260 VQNQLSIP---------------QSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQ 305 (317)
T ss_dssp HHCC--CC---------------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTC
T ss_pred hhccCCCC---------------ccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcC
Confidence 11111000 00122346789999999999999999999999999875
No 137
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=8.7e-39 Score=335.06 Aligned_cols=256 Identities=21% Similarity=0.345 Sum_probs=191.7
Q ss_pred cceecccCeeEEEEEEe-CCCceEEEEEcCCC---chhhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCcceEEEEeecC
Q 005226 412 AYVLGKSGLGIVYKVVL-GNGIPVAVRRLGEG---GEQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISN 487 (707)
Q Consensus 412 ~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~ 487 (707)
.+.||+|+||.||+|.. .+|..||||++... .......+.+|++++++++||||+++++++..++..++||||+++
T Consensus 37 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 116 (310)
T 2wqm_A 37 EKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADA 116 (310)
T ss_dssp EEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCCS
T ss_pred EEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEEEecCCC
Confidence 34799999999999996 47899999998753 234457789999999999999999999999999999999999999
Q ss_pred CChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEecccccccccccCCC
Q 005226 488 GNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNN 567 (707)
Q Consensus 488 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~~~ 567 (707)
|+|.+++.... .....+++..++.++.||+.||+|||+ .+|+||||||+||+++.++.+||+|||+++........
T Consensus 117 ~~L~~~l~~~~-~~~~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~~~~~ 192 (310)
T 2wqm_A 117 GDLSRMIKHFK-KQKRLIPERTVWKYFVQLCSALEHMHS---RRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTA 192 (310)
T ss_dssp CBHHHHHHHHH-HTTCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCC------------
T ss_pred CCHHHHHHHhc-ccccCCCHHHHHHHHHHHHHHHHHHhh---CCeeCCCCcHHHEEEcCCCCEEEEeccceeeecCCCcc
Confidence 99999996421 112358999999999999999999999 89999999999999999999999999998765422111
Q ss_pred CCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchhHHHHHH
Q 005226 568 PSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVRWVK 647 (707)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~ 647 (707)
. ....|+..|+|||.+.. ..++.++||||||+++|||++|+.||..... ....+...+.
T Consensus 193 ~----------------~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~----~~~~~~~~~~ 251 (310)
T 2wqm_A 193 A----------------HSLVGTPYYMSPERIHE-NGYNFKSDIWSLGCLLYEMAALQSPFYGDKM----NLYSLCKKIE 251 (310)
T ss_dssp ----------------------CCSSCCHHHHTT-CCCCHHHHHHHHHHHHHHHHHSSCTTC---C----CHHHHHHHHH
T ss_pred c----------------cccCCCeeEeChHHhCC-CCCCchhhHHHHHHHHHHHHhCCCCCcccch----hHHHHHHHhh
Confidence 0 12356889999998665 6788999999999999999999999864321 1112222222
Q ss_pred hhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHHhhc
Q 005226 648 KGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERIG 706 (707)
Q Consensus 648 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~~L~~i~ 706 (707)
........ .......+.+++.+||+.||++||++.+|++.|++++
T Consensus 252 ~~~~~~~~--------------~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~ 296 (310)
T 2wqm_A 252 QCDYPPLP--------------SDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMH 296 (310)
T ss_dssp TTCSCCCC--------------TTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred cccCCCCc--------------ccccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHH
Confidence 11110000 0112345789999999999999999999999999874
No 138
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=1.8e-38 Score=330.08 Aligned_cols=259 Identities=17% Similarity=0.232 Sum_probs=198.2
Q ss_pred ceecccCeeEEEEEEe-CCCceEEEEEcCCCchhhHHHHHHHHHHHHhcCCCceeeeEEEE-EcCCcceEEEEeecCCCh
Q 005226 413 YVLGKSGLGIVYKVVL-GNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYY-WAPDEKLLISDFISNGNL 490 (707)
Q Consensus 413 ~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~-~~~~~~~lV~e~~~~gsL 490 (707)
+.||+|+||.||+|.. .+++.||||++...... .++.+|++++++++|++++..+.++ ...+..++||||+ +|+|
T Consensus 15 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~L 91 (296)
T 3uzp_A 15 RKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH--PQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL-GPSL 91 (296)
T ss_dssp EEEEEETTEEEEEEEETTTTEEEEEEEEESCSSC--CHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC-CCBH
T ss_pred EEEccCCCeEEEEEEEcCCCcEEEEEEecCCcch--hHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEEec-CCCH
Confidence 4799999999999996 58899999998654332 4688999999999988877666666 5566779999999 9999
Q ss_pred HHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEE---cCCCCeEEecccccccccccCCC
Q 005226 491 ANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILL---DNDFQPYISDFGLSRLINITGNN 567 (707)
Q Consensus 491 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll---~~~~~~kl~DfGla~~~~~~~~~ 567 (707)
.+++.... ..+++..+..++.||+.||+|||+ ++|+||||||+||++ +.++.+||+|||+++........
T Consensus 92 ~~~~~~~~----~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~ 164 (296)
T 3uzp_A 92 EDLFNFCS----RKFSLKTVLLLADQMISRIEYIHS---KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTH 164 (296)
T ss_dssp HHHHHHTT----TCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTC
T ss_pred HHHHHhhc----cCCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHeEEecCCCCCeEEEeeCCCcccccccccc
Confidence 99997543 259999999999999999999999 899999999999999 58899999999999876543221
Q ss_pred CCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchhHHHHHH
Q 005226 568 PSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVRWVK 647 (707)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~ 647 (707)
. ..++.......||..|+|||.+.. ..++.++|||||||++|||++|+.||......... .....+.
T Consensus 165 ~---------~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~---~~~~~~~ 231 (296)
T 3uzp_A 165 Q---------HIPYRENKNLTGTARYASINTHLG-IEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKR---QKYERIS 231 (296)
T ss_dssp C---------BCCCCCSCCCCSCTTTCCHHHHTT-CCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSS---SHHHHHH
T ss_pred c---------ccccccccccccccccCChhhhcC-CCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhh---hhhhhhc
Confidence 1 111222345578999999999765 66899999999999999999999999764432111 1111111
Q ss_pred hhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHHhh
Q 005226 648 KGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERI 705 (707)
Q Consensus 648 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~~L~~i 705 (707)
...... + .+. ........+.+++.+||+.||++||++++|++.|+++
T Consensus 232 ~~~~~~-~-----~~~-----~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~ 278 (296)
T 3uzp_A 232 EKKMST-P-----IEV-----LCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNL 278 (296)
T ss_dssp HHHHHS-C-----HHH-----HTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHH
T ss_pred ccccCC-c-----hHH-----HHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHH
Confidence 100000 0 000 0012235688999999999999999999999999886
No 139
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.2e-38 Score=334.01 Aligned_cols=254 Identities=22% Similarity=0.321 Sum_probs=193.5
Q ss_pred ceecccCeeEEEEEEeC-CCceEEEEEcCCCch--hhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCcceEEEEeecCCC
Q 005226 413 YVLGKSGLGIVYKVVLG-NGIPVAVRRLGEGGE--QRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGN 489 (707)
Q Consensus 413 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gs 489 (707)
+.||+|+||+||+|... +|+.||||++..... ...+.+.+|++++++++||||+++++++...+..++||||+++++
T Consensus 9 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 88 (311)
T 4agu_A 9 GKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCDHTV 88 (311)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCSEEH
T ss_pred eEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEEeCCCch
Confidence 47999999999999975 589999998865532 234678899999999999999999999999999999999999999
Q ss_pred hHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEecccccccccccCCCCC
Q 005226 490 LANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPS 569 (707)
Q Consensus 490 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~ 569 (707)
|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++.........
T Consensus 89 l~~~~~~~~-----~~~~~~~~~i~~~l~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~- 159 (311)
T 4agu_A 89 LHELDRYQR-----GVPEHLVKSITWQTLQAVNFCHK---HNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYY- 159 (311)
T ss_dssp HHHHHHTSS-----CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECC-------
T ss_pred HHHHHhhhc-----CCCHHHHHHHHHHHHHHHHHHHH---CCCcCCCCChhhEEEcCCCCEEEeeCCCchhccCccccc-
Confidence 999987543 58999999999999999999999 899999999999999999999999999998765222111
Q ss_pred CCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchhHHHHHHhh
Q 005226 570 SSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVRWVKKG 649 (707)
Q Consensus 570 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~ 649 (707)
....||..|+|||++.....++.++||||||+++|||++|+.||...... +....+...
T Consensus 160 ---------------~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~------~~~~~~~~~ 218 (311)
T 4agu_A 160 ---------------DDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDV------DQLYLIRKT 218 (311)
T ss_dssp ---------------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH------HHHHHHHHH
T ss_pred ---------------CCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHH------HHHHHHHHH
Confidence 22356889999999766567899999999999999999999999653221 111111111
Q ss_pred ccccC----------------CC---chhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 005226 650 FEEEN----------------PL---SDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSE 700 (707)
Q Consensus 650 ~~~~~----------------~~---~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~ 700 (707)
..... .. ........ ........+.+++.+||+.||++|||++++++
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 284 (311)
T 4agu_A 219 LGDLIPRHQQVFSTNQYFSGVKIPDPEDMEPLEL----KFPNISYPALGLLKGCLHMDPTERLTCEQLLH 284 (311)
T ss_dssp HCSCCHHHHHHHHTCGGGTTCCCCCCSSCCCHHH----HCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHT
T ss_pred hcccccccccccccccccccCcCCCccccchhhh----hcccccHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 11000 00 00000000 00123355789999999999999999999985
No 140
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=1.4e-38 Score=330.79 Aligned_cols=259 Identities=19% Similarity=0.255 Sum_probs=197.0
Q ss_pred ceecccCeeEEEEEEe-CCCceEEEEEcCCCchhhHHHHHHHHHHHHhcCCCceeeeEEEE-EcCCcceEEEEeecCCCh
Q 005226 413 YVLGKSGLGIVYKVVL-GNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYY-WAPDEKLLISDFISNGNL 490 (707)
Q Consensus 413 ~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~-~~~~~~~lV~e~~~~gsL 490 (707)
+.||+|+||.||+|.. .+++.||||++...... ..+.+|++++++++|++++..++++ ..++..++||||+ +|+|
T Consensus 15 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~L 91 (296)
T 4hgt_A 15 RKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH--PQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL-GPSL 91 (296)
T ss_dssp EEEEECSSSEEEEEEETTTTEEEEEEEEEC---C--CCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC-CCBH
T ss_pred eeecCCCCeEEEEEEEcCCCceEEEEeecccccc--hHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEEcc-CCCH
Confidence 4899999999999996 57899999986544322 4578899999999988877776666 5566779999999 9999
Q ss_pred HHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEE---cCCCCeEEecccccccccccCCC
Q 005226 491 ANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILL---DNDFQPYISDFGLSRLINITGNN 567 (707)
Q Consensus 491 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll---~~~~~~kl~DfGla~~~~~~~~~ 567 (707)
.+++.... ..+++..+..++.||+.||+|||+ .+|+||||||+||++ +.++.+||+|||+++........
T Consensus 92 ~~~~~~~~----~~~~~~~~~~i~~qi~~~l~~LH~---~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~~ 164 (296)
T 4hgt_A 92 EDLFNFCS----RKFSLKTVLLLADQMISRIEYIHS---KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTH 164 (296)
T ss_dssp HHHHHHTT----SCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCTTTC
T ss_pred HHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeeeeccCCCCeEEEecCccceeccCcccC
Confidence 99998543 259999999999999999999999 899999999999999 78899999999999876543221
Q ss_pred CCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchhHHHHHH
Q 005226 568 PSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVRWVK 647 (707)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~ 647 (707)
. ..++.......||+.|+|||.+.. ..++.++|||||||++|||++|+.||.......... .+.....
T Consensus 165 ~---------~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~--~~~~~~~ 232 (296)
T 4hgt_A 165 Q---------HIPYRENKNLTGTARYASINTHLG-IEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQ--KYERISE 232 (296)
T ss_dssp C---------BCCCCCSCCCCSCGGGCCHHHHTT-CCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSS--HHHHHHH
T ss_pred c---------cCCCCcccccCCCccccchHHhcC-CCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhh--hhhhhhc
Confidence 1 111223345678999999999765 678999999999999999999999997644331111 1111111
Q ss_pred hhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHHhh
Q 005226 648 KGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERI 705 (707)
Q Consensus 648 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~~L~~i 705 (707)
..... + . ..........+.+++.+||+.||++||++++|++.|+++
T Consensus 233 ~~~~~--~-----~-----~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~ 278 (296)
T 4hgt_A 233 KKMST--P-----I-----EVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNL 278 (296)
T ss_dssp HHHHS--C-----H-----HHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHH
T ss_pred ccccc--h-----h-----hhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHH
Confidence 10000 0 0 000011235688999999999999999999999999886
No 141
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=2.2e-39 Score=351.21 Aligned_cols=246 Identities=20% Similarity=0.217 Sum_probs=193.6
Q ss_pred cceecccCeeEEEEEEeC-CCceEEEEEcCCCch---hhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCcceEEEEeecC
Q 005226 412 AYVLGKSGLGIVYKVVLG-NGIPVAVRRLGEGGE---QRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISN 487 (707)
Q Consensus 412 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~ 487 (707)
.+.||+|+||.||+|... +++.||+|++++... .....+.+|+.+++.++||||+++++++.+++..|+||||+++
T Consensus 74 ~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E~~~g 153 (410)
T 3v8s_A 74 VKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPG 153 (410)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTT
T ss_pred EEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCC
Confidence 358999999999999975 688999999865321 2234588999999999999999999999999999999999999
Q ss_pred CChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEecccccccccccCCC
Q 005226 488 GNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNN 567 (707)
Q Consensus 488 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~~~ 567 (707)
|+|.++++.. .+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++........
T Consensus 154 g~L~~~l~~~------~~~e~~~~~~~~qi~~aL~~LH~---~givHrDLKp~NILl~~~g~ikL~DFG~a~~~~~~~~~ 224 (410)
T 3v8s_A 154 GDLVNLMSNY------DVPEKWARFYTAEVVLALDAIHS---MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMV 224 (410)
T ss_dssp EEHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSEE
T ss_pred CcHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCCHHHeeECCCCCEEEeccceeEeeccCCcc
Confidence 9999999754 48999999999999999999999 89999999999999999999999999999865432110
Q ss_pred CCCCCCCcCCCCCCCCccccccCccccCCCCCCCCC---CCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchhHHH
Q 005226 568 PSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGN---RPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVR 644 (707)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~ 644 (707)
. .....||+.|+|||++.... .++.++|||||||++|||++|+.||..... .....
T Consensus 225 ~---------------~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~------~~~~~ 283 (410)
T 3v8s_A 225 R---------------CDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSL------VGTYS 283 (410)
T ss_dssp E---------------CCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSH------HHHHH
T ss_pred c---------------ccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCCh------hhHHH
Confidence 0 12346799999999976422 267899999999999999999999975321 12222
Q ss_pred HHHhhc-cccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCC--CCChHHHHH
Q 005226 645 WVKKGF-EEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEV--RPRMKNVSE 700 (707)
Q Consensus 645 ~~~~~~-~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~--RPs~~~v~~ 700 (707)
.+.... ....+ ........+.+++.+|+..+|.+ ||+++||++
T Consensus 284 ~i~~~~~~~~~p-------------~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~ 329 (410)
T 3v8s_A 284 KIMNHKNSLTFP-------------DDNDISKEAKNLICAFLTDREVRLGRNGVEEIKR 329 (410)
T ss_dssp HHHTHHHHCCCC-------------TTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHT
T ss_pred HHHhccccccCC-------------CcccccHHHHHHHHHHccChhhhCCCCCHHHHhc
Confidence 111110 00000 00112345789999999999988 999999875
No 142
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=4.3e-39 Score=338.26 Aligned_cols=259 Identities=21% Similarity=0.263 Sum_probs=191.9
Q ss_pred ceecccCeeEEEEEEe-CCCceEEEEEcCCCchhhHHHHHHHHHHHHhc-CCCceeeeEEEEEcCCcceEEEEeecCCCh
Q 005226 413 YVLGKSGLGIVYKVVL-GNGIPVAVRRLGEGGEQRHREFVTEVQAIAKV-KHPNIVKLRAYYWAPDEKLLISDFISNGNL 490 (707)
Q Consensus 413 ~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lV~e~~~~gsL 490 (707)
++||+|+||.||+|.. .+++.||||++..........+.+|++++.++ +||||+++++++.+++..++||||+++|+|
T Consensus 19 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 98 (316)
T 2ac3_A 19 DVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSI 98 (316)
T ss_dssp CCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTCBH
T ss_pred ceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEEcCCCCcH
Confidence 4799999999999995 47899999999766555557889999999995 899999999999999999999999999999
Q ss_pred HHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCC---eEEecccccccccccCCC
Q 005226 491 ANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQ---PYISDFGLSRLINITGNN 567 (707)
Q Consensus 491 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~---~kl~DfGla~~~~~~~~~ 567 (707)
.+++.... .+++..+..++.||+.||+|||+ .+|+||||||+||+++.++. +||+|||+++........
T Consensus 99 ~~~l~~~~-----~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~ 170 (316)
T 2ac3_A 99 LSHIHKRR-----HFNELEASVVVQDVASALDFLHN---KGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDC 170 (316)
T ss_dssp HHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC--------
T ss_pred HHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHh---CCceeCCCCHHHEEEccCCCcCceEEEEccCccccccCCcc
Confidence 99997643 58999999999999999999999 89999999999999998776 999999999765422211
Q ss_pred CCCCCCCcCCCCCCCCccccccCccccCCCCCCC----CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCc-cc---
Q 005226 568 PSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVP----GNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSI-EV--- 639 (707)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~-~~--- 639 (707)
.... ........||+.|+|||++.. ...++.++|||||||++|||++|+.||......... ..
T Consensus 171 ~~~~---------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~ 241 (316)
T 2ac3_A 171 SPIS---------TPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEA 241 (316)
T ss_dssp --------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----C
T ss_pred cccc---------ccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCccccccccccccccc
Confidence 1000 000123457999999998642 134678999999999999999999999765432100 00
Q ss_pred -----hhHHHHHHhhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 005226 640 -----PDLVRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSE 700 (707)
Q Consensus 640 -----~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~ 700 (707)
..+.+.+.. .... ..+.. .......+.+++.+||+.||++|||+.|+++
T Consensus 242 ~~~~~~~~~~~i~~---~~~~---~~~~~------~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 295 (316)
T 2ac3_A 242 CPACQNMLFESIQE---GKYE---FPDKD------WAHISCAAKDLISKLLVRDAKQRLSAAQVLQ 295 (316)
T ss_dssp CHHHHHHHHHHHHH---CCCC---CCHHH------HTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred chhHHHHHHHHHhc---cCcc---cCchh------cccCCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence 001111111 0000 00000 0112356789999999999999999999986
No 143
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=1.5e-38 Score=335.14 Aligned_cols=245 Identities=24% Similarity=0.292 Sum_probs=196.2
Q ss_pred cceecccCeeEEEEEEeC-CCceEEEEEcCCCchh------hHHHHHHHHHHHHhcCCCceeeeEEEEEcCCcceEEEEe
Q 005226 412 AYVLGKSGLGIVYKVVLG-NGIPVAVRRLGEGGEQ------RHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDF 484 (707)
Q Consensus 412 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~ 484 (707)
.+.||+|+||.||+|... +|..||+|.+...... ..+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 17 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 96 (321)
T 2a2a_A 17 GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILEL 96 (321)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred eeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEEEEEc
Confidence 458999999999999975 6899999998654221 246799999999999999999999999999999999999
Q ss_pred ecCCChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCC----CeEEeccccccc
Q 005226 485 ISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDF----QPYISDFGLSRL 560 (707)
Q Consensus 485 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~----~~kl~DfGla~~ 560 (707)
+++|+|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++ .+||+|||+++.
T Consensus 97 ~~~~~L~~~l~~~~-----~~~~~~~~~i~~qi~~aL~~lH~---~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~~ 168 (321)
T 2a2a_A 97 VSGGELFDFLAQKE-----SLSEEEATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHE 168 (321)
T ss_dssp CCSCBHHHHHHTCS-----CEEHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESCTTSSSCCEEECCCTTCEE
T ss_pred CCCCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCChHHEEEecCCCCcCCEEEccCcccee
Confidence 99999999998643 58999999999999999999999 8999999999999999888 799999999986
Q ss_pred ccccCCCCCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccch
Q 005226 561 INITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVP 640 (707)
Q Consensus 561 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~ 640 (707)
....... ....||+.|+|||++.. ..++.++||||||+++|||++|+.||..... .
T Consensus 169 ~~~~~~~-----------------~~~~gt~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~g~~pf~~~~~------~ 224 (321)
T 2a2a_A 169 IEDGVEF-----------------KNIFGTPEFVAPEIVNY-EPLGLEADMWSIGVITYILLSGASPFLGDTK------Q 224 (321)
T ss_dssp CCTTCCC-----------------CCCCSCGGGCCHHHHTT-CCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH------H
T ss_pred cCccccc-----------------cccCCCCCccCcccccC-CCCCCccccHHHHHHHHHHHHCCCCCCCCCH------H
Confidence 6532111 22346899999998654 6788999999999999999999999964321 1
Q ss_pred hHHHHHHhhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 005226 641 DLVRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSE 700 (707)
Q Consensus 641 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~ 700 (707)
.....+... ... .++... ......+.+++.+|++.||++|||+.++++
T Consensus 225 ~~~~~i~~~---~~~----~~~~~~-----~~~~~~~~~li~~~l~~dp~~Rps~~e~l~ 272 (321)
T 2a2a_A 225 ETLANITSV---SYD----FDEEFF-----SHTSELAKDFIRKLLVKETRKRLTIQEALR 272 (321)
T ss_dssp HHHHHHHTT---CCC----CCHHHH-----TTCCHHHHHHHHTTSCSSTTTSCCHHHHHH
T ss_pred HHHHHHHhc---ccc----cChhhh-----cccCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 222211111 100 111110 112345789999999999999999999986
No 144
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=1.2e-38 Score=341.47 Aligned_cols=191 Identities=26% Similarity=0.273 Sum_probs=165.7
Q ss_pred ceecccCeeEEEEEEe-CCCceEEEEEcCCCchhhHHHHHHHHHHHHhcC-----CCceeeeEEEEEcCCcceEEEEeec
Q 005226 413 YVLGKSGLGIVYKVVL-GNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVK-----HPNIVKLRAYYWAPDEKLLISDFIS 486 (707)
Q Consensus 413 ~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----H~niv~l~~~~~~~~~~~lV~e~~~ 486 (707)
+.||+|+||+||+|.. .+++.||||++..... ..+.+..|++++++++ ||||+++++++...+..++||||+
T Consensus 41 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~- 118 (360)
T 3llt_A 41 RKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKK-YTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDHMCLIFEPL- 118 (360)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEECSCHH-HHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETTEEEEEECCC-
T ss_pred EEEcccCCeEEEEEEECCCCeEEEEEEeccchh-hhhhhHHHHHHHHHhcccCCCCCCeecccceeeECCeeEEEEcCC-
Confidence 4799999999999997 4788999999975433 3367788999999996 999999999999999999999999
Q ss_pred CCChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcC--------------------
Q 005226 487 NGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDN-------------------- 546 (707)
Q Consensus 487 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~-------------------- 546 (707)
+++|.+++.... ...+++..+..++.||+.||+|||+ ++|+||||||+|||++.
T Consensus 119 ~~~L~~~~~~~~---~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~~~~~ 192 (360)
T 3llt_A 119 GPSLYEIITRNN---YNGFHIEDIKLYCIEILKALNYLRK---MSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQ 192 (360)
T ss_dssp CCBHHHHHHHTT---TCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCTTCCEEEEEEECTTTCCEEE
T ss_pred CCCHHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCcccEEEccccccccccchhccccccccc
Confidence 999999998654 2358999999999999999999999 89999999999999975
Q ss_pred -----CCCeEEecccccccccccCCCCCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHH
Q 005226 547 -----DFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLEL 621 (707)
Q Consensus 547 -----~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~el 621 (707)
++.+||+|||+|+...... ....||+.|+|||++.. ..++.++|||||||++|||
T Consensus 193 ~~~~~~~~~kl~DFG~a~~~~~~~-------------------~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~el 252 (360)
T 3llt_A 193 IYRTKSTGIKLIDFGCATFKSDYH-------------------GSIINTRQYRAPEVILN-LGWDVSSDMWSFGCVLAEL 252 (360)
T ss_dssp EEEESCCCEEECCCTTCEETTSCC-------------------CSCCSCGGGCCHHHHTT-CCCCTTHHHHHHHHHHHHH
T ss_pred ccccCCCCEEEEeccCceecCCCC-------------------cCccCcccccCcHHHcC-CCCCCccchHHHHHHHHHH
Confidence 7899999999997643211 12356899999999765 6789999999999999999
Q ss_pred HhCCCCCCCC
Q 005226 622 LTGKSPELSP 631 (707)
Q Consensus 622 ltg~~P~~~~ 631 (707)
++|+.||...
T Consensus 253 l~g~~pf~~~ 262 (360)
T 3llt_A 253 YTGSLLFRTH 262 (360)
T ss_dssp HHSSCSCCCS
T ss_pred HHCCCCCCCC
Confidence 9999999753
No 145
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=1e-38 Score=340.84 Aligned_cols=277 Identities=17% Similarity=0.227 Sum_probs=204.6
Q ss_pred CCcceEeecCCcccchHHHHHhccceecccCeeEEEEEEeCC---------CceEEEEEcCCCchhhHHHHHHHHHHHHh
Q 005226 389 GEGELVAIDKGFTFELDELLRASAYVLGKSGLGIVYKVVLGN---------GIPVAVRRLGEGGEQRHREFVTEVQAIAK 459 (707)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~E~~~l~~ 459 (707)
..+..+.-..+..|++.+ .||+|+||.||+|.... ++.||||.+... +.+.+|++++++
T Consensus 31 ~~g~~i~~~~~~~y~~~~-------~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~ 98 (352)
T 2jii_A 31 PTGTVLTDKSGRQWKLKS-------FQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQR 98 (352)
T ss_dssp CTTCEEECTTSCEEEEEE-------EEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHH
T ss_pred CCCceeecccCCeEEEEE-------EecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHH
Confidence 344444333344555444 79999999999999763 789999998754 467899999999
Q ss_pred cCCCceee---------------eEEEEEc-CCcceEEEEeecCCChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q 005226 460 VKHPNIVK---------------LRAYYWA-PDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAY 523 (707)
Q Consensus 460 l~H~niv~---------------l~~~~~~-~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~y 523 (707)
++||||++ +++++.. ++..++||||+ +|+|.+++.... ...+++..++.|+.||+.||+|
T Consensus 99 l~h~niv~~~~~~~~~~~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~---~~~l~~~~~~~i~~qi~~~L~~ 174 (352)
T 2jii_A 99 AAKPLQVNKWKKLYSTPLLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSP---KHVLSERSVLQVACRLLDALEF 174 (352)
T ss_dssp HCCHHHHHHHHHHTTCTTCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSG---GGCCCHHHHHHHHHHHHHHHHH
T ss_pred hcccchhhhhhhhccCCccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCC---cCCCCHHHHHHHHHHHHHHHHH
Confidence 99999988 6778876 67789999999 999999998642 2369999999999999999999
Q ss_pred HhhcCCCCceecCCCCCCeEEcCCC--CeEEecccccccccccCCCCCCCCCCcCCCCCCCCccccccCccccCCCCCCC
Q 005226 524 LHECSPRKFVHGDIKPSNILLDNDF--QPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVP 601 (707)
Q Consensus 524 LH~~~~~~iiHrDlk~~NIll~~~~--~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 601 (707)
||+ ++|+||||||+||+++.++ .+||+|||+++............. .......||+.|+|||++..
T Consensus 175 LH~---~~ivH~Dikp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~---------~~~~~~~gt~~y~aPE~~~~ 242 (352)
T 2jii_A 175 LHE---NEYVHGNVTAENIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVE---------GSRSPHEGDLEFISMDLHKG 242 (352)
T ss_dssp HHH---TTCBCSCCCGGGEEEETTEEEEEEECCGGGCBCSSGGGCCCCCCT---------TSSCTTCSCTTTCCHHHHTT
T ss_pred HHh---CCccCCCCCHHHEEEcCCCCceEEEecCcceeeccCCCccccccc---------cccccccCCccccCHHHHcc
Confidence 999 8999999999999999998 899999999987654332211100 01123467999999998665
Q ss_pred CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchhHHHHHHhhccccCCCchhchHHHHhhhhhHHHHHHHHHHH
Q 005226 602 GNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLA 681 (707)
Q Consensus 602 ~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~ 681 (707)
..++.++|||||||++|||++|+.||...... ...+........... ....+... ........+.+++
T Consensus 243 -~~~~~~~Di~slG~il~el~~g~~pf~~~~~~----~~~~~~~~~~~~~~~---~~~~~~~~----~~~~~~~~l~~li 310 (352)
T 2jii_A 243 -CGPSRRSDLQSLGYCMLKWLYGFLPWTNCLPN----TEDIMKQKQKFVDKP---GPFVGPCG----HWIRPSETLQKYL 310 (352)
T ss_dssp -CCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTC----HHHHHHHHHHHHHSC---CCEECTTS----CEECCCHHHHHHH
T ss_pred -CCCCchhhHHHHHHHHHHHHhCCCCcccCCcC----HHHHHHHHHhccCCh---hhhhhhcc----ccCCCcHHHHHHH
Confidence 67899999999999999999999999754321 112222221111111 11111000 0001235678999
Q ss_pred HhccCCCCCCCCChHHHHHHHHhh
Q 005226 682 LACTEADPEVRPRMKNVSENLERI 705 (707)
Q Consensus 682 ~~Cl~~dP~~RPs~~~v~~~L~~i 705 (707)
.+||+.||++||++++|++.|+++
T Consensus 311 ~~~l~~dp~~Rps~~~l~~~L~~~ 334 (352)
T 2jii_A 311 KVVMALTYEEKPPYAMLRNNLEAL 334 (352)
T ss_dssp HHHHTCCTTCCCCHHHHHHHHHHH
T ss_pred HHHHhCChhhCCCHHHHHHHHHHH
Confidence 999999999999999999999886
No 146
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=4.3e-39 Score=333.26 Aligned_cols=247 Identities=23% Similarity=0.317 Sum_probs=190.5
Q ss_pred cceecccCeeEEEEEEeC-CCceEEEEEcCCCc-hhhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCcceEEEEeecCCC
Q 005226 412 AYVLGKSGLGIVYKVVLG-NGIPVAVRRLGEGG-EQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGN 489 (707)
Q Consensus 412 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gs 489 (707)
.+.||+|+||.||++... ++..||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++||||+++|+
T Consensus 27 ~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~ 106 (285)
T 3is5_A 27 KRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGE 106 (285)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCSCCB
T ss_pred cceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEeCCCCc
Confidence 348999999999999964 68899999987653 2345788999999999999999999999999999999999999999
Q ss_pred hHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEE---cCCCCeEEecccccccccccCC
Q 005226 490 LANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILL---DNDFQPYISDFGLSRLINITGN 566 (707)
Q Consensus 490 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll---~~~~~~kl~DfGla~~~~~~~~ 566 (707)
|.+++..... ....+++..+..|+.|++.||+|||+ .+|+||||||+||++ +.++.+||+|||+++.......
T Consensus 107 L~~~l~~~~~-~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~~~~ 182 (285)
T 3is5_A 107 LLERIVSAQA-RGKALSEGYVAELMKQMMNALAYFHS---QHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEH 182 (285)
T ss_dssp HHHHHHHHHH-HTCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC------
T ss_pred HHHHHHhhhh-cccCCCHHHHHHHHHHHHHHHHHHHh---CCEEECCCCHHHEEEecCCCCCCEEEEeeecceecCCccc
Confidence 9999964310 12359999999999999999999999 899999999999999 4567899999999976543211
Q ss_pred CCCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchhHHHHH
Q 005226 567 NPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVRWV 646 (707)
Q Consensus 567 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~ 646 (707)
. ....||+.|+|||++. ..++.++||||||+++|||++|+.||..... .......
T Consensus 183 ~-----------------~~~~~t~~y~aPE~~~--~~~~~~~Di~slG~il~~ll~g~~pf~~~~~------~~~~~~~ 237 (285)
T 3is5_A 183 S-----------------TNAAGTALYMAPEVFK--RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSL------EEVQQKA 237 (285)
T ss_dssp ---------------------CTTGGGCCHHHHT--TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHH
T ss_pred C-----------------cCcccccCcCChHHhc--cCCCcccCeehHHHHHHHHHhCCCCCCCCCH------HHHHhhh
Confidence 1 2335689999999864 4678999999999999999999999965321 1222211
Q ss_pred HhhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 005226 647 KKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSE 700 (707)
Q Consensus 647 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~ 700 (707)
......... ........+.+++.+||+.||++|||+.|+++
T Consensus 238 ~~~~~~~~~-------------~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 278 (285)
T 3is5_A 238 TYKEPNYAV-------------ECRPLTPQAVDLLKQMLTKDPERRPSAAQVLH 278 (285)
T ss_dssp HHCCCCCCC---------------CCCCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred ccCCccccc-------------ccCcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 111110000 00112345678999999999999999999985
No 147
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=5.2e-39 Score=339.51 Aligned_cols=254 Identities=28% Similarity=0.404 Sum_probs=197.6
Q ss_pred ceecccCeeEEEEEEe------CCCceEEEEEcCCC-chhhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCcceEEEEee
Q 005226 413 YVLGKSGLGIVYKVVL------GNGIPVAVRRLGEG-GEQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFI 485 (707)
Q Consensus 413 ~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~ 485 (707)
+.||+|+||.||+|.. .++..||||++... ......++.+|+.++++++||||+++++++...+..++||||+
T Consensus 36 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 115 (327)
T 2yfx_A 36 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELM 115 (327)
T ss_dssp EECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECC
T ss_pred EEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCcEEEEecC
Confidence 4799999999999984 35678999999754 3344578999999999999999999999999999999999999
Q ss_pred cCCChHHHHhCCCCC--CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcC---CCCeEEeccccccc
Q 005226 486 SNGNLANALRGRNGQ--PSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDN---DFQPYISDFGLSRL 560 (707)
Q Consensus 486 ~~gsL~~~l~~~~~~--~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~---~~~~kl~DfGla~~ 560 (707)
++|+|.+++...... ....+++..++.++.||+.||+|||+ .+|+||||||+||+++. +..+||+|||+++.
T Consensus 116 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~---~~i~H~dlkp~NIli~~~~~~~~~kl~Dfg~~~~ 192 (327)
T 2yfx_A 116 AGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARD 192 (327)
T ss_dssp TTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESCSSTTCCEEECCCHHHHH
T ss_pred CCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhh---CCeecCcCCHhHEEEecCCCcceEEECccccccc
Confidence 999999999865421 22458999999999999999999999 89999999999999984 45699999999986
Q ss_pred ccccCCCCCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCCCccc
Q 005226 561 INITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTSIEV 639 (707)
Q Consensus 561 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~ellt-g~~P~~~~~~~~~~~~ 639 (707)
......... .....+++.|+|||.+.. ..++.++||||||+++|||+| |+.||.... .
T Consensus 193 ~~~~~~~~~--------------~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~ellt~g~~p~~~~~------~ 251 (327)
T 2yfx_A 193 IYRASYYRK--------------GGCAMLPVKWMPPEAFME-GIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS------N 251 (327)
T ss_dssp HHC--------------------CCGGGSCGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC------H
T ss_pred ccccccccc--------------CCCcCCCcceeCHhHhcC-CCCCchhhHHHHHHHHHHHHcCCCCCCCCcC------H
Confidence 543221110 123456889999998654 678899999999999999998 899986432 2
Q ss_pred hhHHHHHHhhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHHhh
Q 005226 640 PDLVRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERI 705 (707)
Q Consensus 640 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~~L~~i 705 (707)
....+++........+ ......+.+++.+||+.||.+||++.+|++.|+.+
T Consensus 252 ~~~~~~~~~~~~~~~~---------------~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~ 302 (327)
T 2yfx_A 252 QEVLEFVTSGGRMDPP---------------KNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYC 302 (327)
T ss_dssp HHHHHHHHTTCCCCCC---------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCCCCC---------------CCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHH
Confidence 2333333332221111 11234578899999999999999999999999876
No 148
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=1.3e-38 Score=339.00 Aligned_cols=236 Identities=21% Similarity=0.275 Sum_probs=190.0
Q ss_pred ceecccCeeEEEEEEeC-CCceEEEEEcCCCc---hhhHHHHHHHHHHHHhc-CCCceeeeEEEEEcCCcceEEEEeecC
Q 005226 413 YVLGKSGLGIVYKVVLG-NGIPVAVRRLGEGG---EQRHREFVTEVQAIAKV-KHPNIVKLRAYYWAPDEKLLISDFISN 487 (707)
Q Consensus 413 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lV~e~~~~ 487 (707)
++||+|+||.||+|... +++.||+|+++... ......+.+|.+++..+ +||||+++++++.+.+..|+||||+++
T Consensus 26 ~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~E~~~g 105 (353)
T 2i0e_A 26 MVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNG 105 (353)
T ss_dssp EEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEEEEECCCS
T ss_pred EEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEEEEeCCCC
Confidence 48999999999999976 57899999987542 22346788999999988 899999999999999999999999999
Q ss_pred CChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEecccccccccccCCC
Q 005226 488 GNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNN 567 (707)
Q Consensus 488 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~~~ 567 (707)
|+|.+++...+ .+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++........
T Consensus 106 g~L~~~l~~~~-----~~~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~ 177 (353)
T 2i0e_A 106 GDLMYHIQQVG-----RFKEPHAVFYAAEIAIGLFFLQS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVT 177 (353)
T ss_dssp CBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCC
T ss_pred CcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHH---CCEEeccCCHHHEEEcCCCcEEEEeCCcccccccCCcc
Confidence 99999998643 59999999999999999999999 89999999999999999999999999999754321110
Q ss_pred CCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchhHHHHHH
Q 005226 568 PSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVRWVK 647 (707)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~ 647 (707)
.....||+.|+|||++.. ..++.++|||||||++|||++|+.||.... ...+.+.+.
T Consensus 178 ----------------~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~ell~G~~Pf~~~~------~~~~~~~i~ 234 (353)
T 2i0e_A 178 ----------------TKTFCGTPDYIAPEIIAY-QPYGKSVDWWAFGVLLYEMLAGQAPFEGED------EDELFQSIM 234 (353)
T ss_dssp ----------------BCCCCSCGGGCCHHHHTT-CCBSTHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHH
T ss_pred ----------------cccccCCccccChhhhcC-CCcCCcccccchHHHHHHHHcCCCCCCCCC------HHHHHHHHH
Confidence 123457999999999765 678999999999999999999999996432 112222221
Q ss_pred hhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCCh
Q 005226 648 KGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRM 695 (707)
Q Consensus 648 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~ 695 (707)
. ....+. .....++.+++.+|++.||++||++
T Consensus 235 ~---~~~~~p-------------~~~s~~~~~li~~lL~~dP~~R~~~ 266 (353)
T 2i0e_A 235 E---HNVAYP-------------KSMSKEAVAICKGLMTKHPGKRLGC 266 (353)
T ss_dssp H---CCCCCC-------------TTSCHHHHHHHHHHTCSCTTSCTTC
T ss_pred h---CCCCCC-------------CCCCHHHHHHHHHHhhcCHHHcCCC
Confidence 1 111111 1123457899999999999999964
No 149
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=4.4e-39 Score=340.07 Aligned_cols=252 Identities=28% Similarity=0.463 Sum_probs=196.1
Q ss_pred cceecccCeeEEEEEEeC-CCce--EEEEEcCCC-chhhHHHHHHHHHHHHhc-CCCceeeeEEEEEcCCcceEEEEeec
Q 005226 412 AYVLGKSGLGIVYKVVLG-NGIP--VAVRRLGEG-GEQRHREFVTEVQAIAKV-KHPNIVKLRAYYWAPDEKLLISDFIS 486 (707)
Q Consensus 412 ~~~lG~G~~g~Vy~~~~~-~~~~--vavK~~~~~-~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lV~e~~~ 486 (707)
.+.||+|+||.||+|... ++.. +|+|.+... .....+.+.+|+++++++ +||||+++++++.+.+..++||||++
T Consensus 30 ~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~ 109 (327)
T 1fvr_A 30 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAP 109 (327)
T ss_dssp EEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEEECCCT
T ss_pred eeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEEEecCC
Confidence 348999999999999964 5554 589988754 233446789999999999 99999999999999999999999999
Q ss_pred CCChHHHHhCCCC-----------CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEecc
Q 005226 487 NGNLANALRGRNG-----------QPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDF 555 (707)
Q Consensus 487 ~gsL~~~l~~~~~-----------~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~Df 555 (707)
+|+|.+++..... .....+++..++.++.||+.||+|||+ ++|+||||||+||+++.++.+||+||
T Consensus 110 ~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIl~~~~~~~kL~Df 186 (327)
T 1fvr_A 110 HGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADF 186 (327)
T ss_dssp TCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECGGGCEEECCT
T ss_pred CCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCccceEEEcCCCeEEEccc
Confidence 9999999986530 122468999999999999999999999 89999999999999999999999999
Q ss_pred cccccccccCCCCCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCC
Q 005226 556 GLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTS 634 (707)
Q Consensus 556 Gla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~ellt-g~~P~~~~~~~ 634 (707)
|+++....... .....++..|+|||++.. ..++.++||||||+++|||+| |+.||....
T Consensus 187 g~~~~~~~~~~-----------------~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~ellt~g~~pf~~~~-- 246 (327)
T 1fvr_A 187 GLSRGQEVYVK-----------------KTMGRLPVRWMAIESLNY-SVYTTNSDVWSYGVLLWEIVSLGGTPYCGMT-- 246 (327)
T ss_dssp TCEESSCEECC-----------------C----CCTTTCCHHHHHH-CEECHHHHHHHHHHHHHHHHTTSCCTTTTCC--
T ss_pred CcCcccccccc-----------------ccCCCCCccccChhhhcc-ccCCchhcchHHHHHHHHHHcCCCCCCCCCc--
Confidence 99874432111 122345788999998654 567899999999999999998 999996532
Q ss_pred CCccchhHHHHHHhhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHHhh
Q 005226 635 TSIEVPDLVRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERI 705 (707)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~~L~~i 705 (707)
...+.+.+........+ ......+.+++.+||+.||.+||++.++++.|+++
T Consensus 247 ----~~~~~~~~~~~~~~~~~---------------~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~ 298 (327)
T 1fvr_A 247 ----CAELYEKLPQGYRLEKP---------------LNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRM 298 (327)
T ss_dssp ----HHHHHHHGGGTCCCCCC---------------TTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred ----HHHHHHHhhcCCCCCCC---------------CCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 12222222222111111 11234578999999999999999999999999876
No 150
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=3.5e-39 Score=351.18 Aligned_cols=210 Identities=22% Similarity=0.350 Sum_probs=157.6
Q ss_pred hHHHHHhccceecccCeeEEEEEEeC---CCceEEEEEcCCCchhhHHHHHHHHHHHHhcCCCceeeeEEEEEc--CCcc
Q 005226 404 LDELLRASAYVLGKSGLGIVYKVVLG---NGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWA--PDEK 478 (707)
Q Consensus 404 ~~~~~~~~~~~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~--~~~~ 478 (707)
+.+.....+++||+|+||+||+|... ++..||||++...... ..+.+|++++++++||||+++++++.. +...
T Consensus 18 ~~~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~~--~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~ 95 (405)
T 3rgf_A 18 VEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGIS--MSACREIALLRELKHPNVISLQKVFLSHADRKV 95 (405)
T ss_dssp HHHHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSCC--HHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEE
T ss_pred hhhhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCCC--HHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeE
Confidence 33433334568999999999999965 5789999999765332 568899999999999999999999965 5678
Q ss_pred eEEEEeecCCChHHHHhCCC----CCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEE----cCCCCe
Q 005226 479 LLISDFISNGNLANALRGRN----GQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILL----DNDFQP 550 (707)
Q Consensus 479 ~lV~e~~~~gsL~~~l~~~~----~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll----~~~~~~ 550 (707)
++||||+. |+|.+++.... ......+++..+..|+.||+.||+|||+ .+|+||||||+|||+ +.++.+
T Consensus 96 ~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~ 171 (405)
T 3rgf_A 96 WLLFDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHA---NWVLHRDLKPANILVMGEGPERGRV 171 (405)
T ss_dssp EEEEECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECCSSTTTTCE
T ss_pred EEEEeCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHh---CCEeCCCcCHHHeEEecCCCCCCcE
Confidence 99999996 58888885321 1112359999999999999999999999 899999999999999 777899
Q ss_pred EEecccccccccccCCCCCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Q 005226 551 YISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELS 630 (707)
Q Consensus 551 kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~ 630 (707)
||+|||+|+.......... ......||+.|+|||++.....++.++|||||||++|||++|+.||..
T Consensus 172 kl~Dfg~a~~~~~~~~~~~-------------~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~ 238 (405)
T 3rgf_A 172 KIADMGFARLFNSPLKPLA-------------DLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC 238 (405)
T ss_dssp EECCTTCCC-----------------------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred EEEECCCceecCCCCcccc-------------cCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCC
Confidence 9999999987643211100 112346799999999977656689999999999999999999999976
Q ss_pred CC
Q 005226 631 PT 632 (707)
Q Consensus 631 ~~ 632 (707)
..
T Consensus 239 ~~ 240 (405)
T 3rgf_A 239 RQ 240 (405)
T ss_dssp CC
T ss_pred cc
Confidence 43
No 151
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=1.4e-38 Score=328.17 Aligned_cols=239 Identities=25% Similarity=0.344 Sum_probs=191.0
Q ss_pred ceecccCeeEEEEEEeC-CCceEEEEEcCCCch---hhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCcceEEEEeecCC
Q 005226 413 YVLGKSGLGIVYKVVLG-NGIPVAVRRLGEGGE---QRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNG 488 (707)
Q Consensus 413 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~g 488 (707)
+.||+|+||.||+|... ++..||+|++..... .....+.+|+.++++++||||+++++++.+.+..++||||+++|
T Consensus 15 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 94 (279)
T 3fdn_A 15 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLG 94 (279)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCTTE
T ss_pred eEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEEEecCCCC
Confidence 47999999999999865 577899999865421 22467889999999999999999999999999999999999999
Q ss_pred ChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEecccccccccccCCCC
Q 005226 489 NLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNP 568 (707)
Q Consensus 489 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~ 568 (707)
+|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++........
T Consensus 95 ~l~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~LH~---~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~~~-- 164 (279)
T 3fdn_A 95 TVYRELQKLS-----KFDEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR-- 164 (279)
T ss_dssp EHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHT---TTCEECCCCGGGEEECTTSCEEECSCCEESCC-------
T ss_pred cHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHh---CCEecccCChHhEEEcCCCCEEEEeccccccCCcccc--
Confidence 9999997643 58999999999999999999999 8999999999999999999999999999865432110
Q ss_pred CCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchhHHHHHHh
Q 005226 569 SSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVRWVKK 648 (707)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~ 648 (707)
....|+..|+|||.+.. ..++.++||||||+++|||++|+.||..... ......+..
T Consensus 165 ----------------~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~g~~p~~~~~~------~~~~~~~~~ 221 (279)
T 3fdn_A 165 ----------------TDLCGTLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGKPPFEANTY------QETYKRISR 221 (279)
T ss_dssp -------------------CCCCTTCCHHHHTT-CCCCTTHHHHHHHHHHHHHHHSSCTTCCSSH------HHHHHHHHH
T ss_pred ----------------cccCCCCCccCHhHhcc-CCCCccchhHhHHHHHHHHHHCCCCCCCCcH------HHHHHHHHh
Confidence 22356899999998654 6778999999999999999999999964221 112211111
Q ss_pred hccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 005226 649 GFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSE 700 (707)
Q Consensus 649 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~ 700 (707)
. ...+.+ .....+.+++.+||+.||++||+++|+++
T Consensus 222 ~---~~~~~~-------------~~~~~~~~li~~~l~~~p~~Rps~~e~l~ 257 (279)
T 3fdn_A 222 V---EFTFPD-------------FVTEGARDLISRLLKHNPSQRPMLREVLE 257 (279)
T ss_dssp T---CCCCCT-------------TSCHHHHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred C---CCCCCC-------------cCCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 1 111111 12245678999999999999999999986
No 152
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=6.9e-39 Score=341.06 Aligned_cols=256 Identities=21% Similarity=0.231 Sum_probs=192.4
Q ss_pred cceecccCeeEEEEEEeC-CCceEEEEEcCCC-----chhhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCcceEEEEee
Q 005226 412 AYVLGKSGLGIVYKVVLG-NGIPVAVRRLGEG-----GEQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFI 485 (707)
Q Consensus 412 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~ 485 (707)
.+.||+|+||.||+|... ++..||+|++... .....+.+.+|++++++++||||+++++++.+.+..++||||+
T Consensus 31 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 110 (345)
T 3hko_A 31 KGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYICLVMELC 110 (345)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred cceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCCeEEEEEeCC
Confidence 458999999999999964 6788999998643 2334578999999999999999999999999999999999999
Q ss_pred cCCChHHHHhCCCCC-----------------------------------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCC
Q 005226 486 SNGNLANALRGRNGQ-----------------------------------PSTSLSWSTRLRIAKGTARGLAYLHECSPR 530 (707)
Q Consensus 486 ~~gsL~~~l~~~~~~-----------------------------------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~ 530 (707)
++|+|.+++...... ....+++..+..|+.||+.||+|||+ .
T Consensus 111 ~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~---~ 187 (345)
T 3hko_A 111 HGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHN---Q 187 (345)
T ss_dssp CSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHHHH---T
T ss_pred CCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHH---C
Confidence 999999999521100 01124677888999999999999999 8
Q ss_pred CceecCCCCCCeEEcCCC--CeEEecccccccccccCCCCCCCCCCcCCCCCCCCccccccCccccCCCCCCC-CCCCCc
Q 005226 531 KFVHGDIKPSNILLDNDF--QPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVP-GNRPMQ 607 (707)
Q Consensus 531 ~iiHrDlk~~NIll~~~~--~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~ 607 (707)
+|+||||||+||+++.++ .+||+|||+++.......... .......||+.|+|||++.. ...++.
T Consensus 188 ~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~------------~~~~~~~gt~~y~aPE~~~~~~~~~~~ 255 (345)
T 3hko_A 188 GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEY------------YGMTTKAGTPYFVAPEVLNTTNESYGP 255 (345)
T ss_dssp TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------------------CCCGGGCCHHHHTCSSSCCCT
T ss_pred CccccCCChhhEEEecCCCceEEEeeccccccccccCcccc------------ccccccCCCccccCchhhccCCCCCCc
Confidence 999999999999998776 899999999987653221111 11133457999999998753 367789
Q ss_pred hhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchhHHHHHHhhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCC
Q 005226 608 KWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEA 687 (707)
Q Consensus 608 ~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~ 687 (707)
++||||||+++|||++|+.||..... .+....+.. ....+. .+ ........+.+++.+||+.
T Consensus 256 ~~DiwslG~il~el~~g~~pf~~~~~------~~~~~~~~~---~~~~~~---~~------~~~~~~~~~~~li~~~l~~ 317 (345)
T 3hko_A 256 KCDAWSAGVLLHLLLMGAVPFPGVND------ADTISQVLN---KKLCFE---NP------NYNVLSPLARDLLSNLLNR 317 (345)
T ss_dssp HHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHH---CCCCTT---SG------GGGGSCHHHHHHHHHHSCS
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCh------HHHHHHHHh---cccccC---Cc------ccccCCHHHHHHHHHHcCC
Confidence 99999999999999999999964321 111111111 111000 00 0011234678999999999
Q ss_pred CCCCCCChHHHHH
Q 005226 688 DPEVRPRMKNVSE 700 (707)
Q Consensus 688 dP~~RPs~~~v~~ 700 (707)
||++||++.++++
T Consensus 318 ~p~~Rps~~~~l~ 330 (345)
T 3hko_A 318 NVDERFDAMRALQ 330 (345)
T ss_dssp CTTTSCCHHHHHH
T ss_pred ChhHCCCHHHHhc
Confidence 9999999999986
No 153
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=1.6e-38 Score=328.59 Aligned_cols=244 Identities=22% Similarity=0.302 Sum_probs=194.7
Q ss_pred ceecccCeeEEEEEEeC-CCceEEEEEcCCC--chhhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCcceEEEEeecCCC
Q 005226 413 YVLGKSGLGIVYKVVLG-NGIPVAVRRLGEG--GEQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGN 489 (707)
Q Consensus 413 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gs 489 (707)
+.||+|+||.||+|... ++..||+|++... .....+.+.+|++++++++||||+++++++..++..++||||+++|+
T Consensus 12 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~ 91 (284)
T 3kk8_A 12 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGE 91 (284)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCB
T ss_pred hhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEEecCCCCC
Confidence 47999999999999965 6889999998654 33345778899999999999999999999999999999999999999
Q ss_pred hHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCC---eEEecccccccccccCC
Q 005226 490 LANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQ---PYISDFGLSRLINITGN 566 (707)
Q Consensus 490 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~---~kl~DfGla~~~~~~~~ 566 (707)
|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++. +||+|||++........
T Consensus 92 l~~~~~~~~-----~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~ 163 (284)
T 3kk8_A 92 LFEDIVARE-----FYSEADASHCIQQILESIAYCHS---NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA 163 (284)
T ss_dssp HHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSSCB
T ss_pred HHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHH---CCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccCcc
Confidence 999997643 58999999999999999999999 89999999999999987655 99999999976543221
Q ss_pred CCCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchhHHHHH
Q 005226 567 NPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVRWV 646 (707)
Q Consensus 567 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~ 646 (707)
. ....||+.|+|||++.. ..++.++||||||+++|||++|+.||.... .......+
T Consensus 164 ~-----------------~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~------~~~~~~~~ 219 (284)
T 3kk8_A 164 W-----------------HGFAGTPGYLSPEVLKK-DPYSKPVDIWACGVILYILLVGYPPFWDED------QHRLYAQI 219 (284)
T ss_dssp C-----------------CCSCSCGGGCCHHHHTT-CCBCTHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHH
T ss_pred c-----------------cCCCCCcCCcCchhhcC-CCCCcccchHHHHHHHHHHHHCCCCCCCCc------hhHHHHHH
Confidence 1 12346899999999765 677899999999999999999999996432 11222222
Q ss_pred HhhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 005226 647 KKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSE 700 (707)
Q Consensus 647 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~ 700 (707)
......... + ........+.+++.+|++.||++|||+.|+++
T Consensus 220 ~~~~~~~~~------~------~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (284)
T 3kk8_A 220 KAGAYDYPS------P------EWDTVTPEAKSLIDSMLTVNPKKRITADQALK 261 (284)
T ss_dssp HHTCCCCCT------T------TTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred HhccccCCc------h------hhcccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 221111000 0 00112345779999999999999999999976
No 154
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=2.9e-39 Score=342.67 Aligned_cols=268 Identities=23% Similarity=0.326 Sum_probs=188.7
Q ss_pred ceecccCeeEEEEEEeCCCceEEEEEcCCCchhhHHHHHHHHHH--HHhcCCCceeeeEEEEEcC-----CcceEEEEee
Q 005226 413 YVLGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHREFVTEVQA--IAKVKHPNIVKLRAYYWAP-----DEKLLISDFI 485 (707)
Q Consensus 413 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~--l~~l~H~niv~l~~~~~~~-----~~~~lV~e~~ 485 (707)
+.||+|+||.||+|.. +++.||||++..... ..+..|.++ +..++||||+++++++... ...++||||+
T Consensus 19 ~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~---~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~ 94 (336)
T 3g2f_A 19 ELIGRGRYGAVYKGSL-DERPVAVKVFSFANR---QNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYY 94 (336)
T ss_dssp EEEEECSSEEEEEEEE-TTEEEEEEEEEGGGH---HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEEEEECCC
T ss_pred eecccCCCeEEEEEEE-CCeEEEEEEeeccch---hhHHHHHHHHHHHhccCcchhhheecccccccCCCceEEEEEecC
Confidence 4799999999999987 788999999865432 344445444 4558999999999866431 2458999999
Q ss_pred cCCChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCC---------CceecCCCCCCeEEcCCCCeEEeccc
Q 005226 486 SNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPR---------KFVHGDIKPSNILLDNDFQPYISDFG 556 (707)
Q Consensus 486 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~---------~iiHrDlk~~NIll~~~~~~kl~DfG 556 (707)
++|+|.+++.... .++..+.+|+.||+.||+|||+ . +|+||||||+|||++.++.+||+|||
T Consensus 95 ~~g~L~~~l~~~~------~~~~~~~~i~~qi~~~L~~LH~---~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DFG 165 (336)
T 3g2f_A 95 PNGSLXKYLSLHT------SDWVSSCRLAHSVTRGLAYLHT---ELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFG 165 (336)
T ss_dssp TTCBHHHHHHHCC------BCHHHHHHHHHHHHHHHHHHHC---CBCCGGGCBCCEECSSCSGGGEEECTTSCEEECCCT
T ss_pred CCCcHHHHHhhcc------cchhHHHHHHHHHHHHHHHHHh---hhccccccccceeecccccceEEEcCCCcEEEeecc
Confidence 9999999997653 6899999999999999999999 6 99999999999999999999999999
Q ss_pred ccccccccCCCCCCCCCCcCCCCCCCCccccccCccccCCCCCCCC------CCCCchhhHHHHHHHHHHHHhCCCCCCC
Q 005226 557 LSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPG------NRPMQKWDVYSFGVVLLELLTGKSPELS 630 (707)
Q Consensus 557 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~------~~~~~~~DV~S~Gv~l~elltg~~P~~~ 630 (707)
+++.+.......... .........||+.|+|||++... ..++.++|||||||++|||++|+.||..
T Consensus 166 ~a~~~~~~~~~~~~~--------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~ 237 (336)
T 3g2f_A 166 LSMRLTGNRLVRPGE--------EDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFP 237 (336)
T ss_dssp TCEECSSSSCC-----------------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGST
T ss_pred ceeecccccccCccc--------cccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCC
Confidence 998765332111000 00011234579999999986542 2445789999999999999999888755
Q ss_pred CCCCCCccchh--------HHHHHHhhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHHHH
Q 005226 631 PTTSTSIEVPD--------LVRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENL 702 (707)
Q Consensus 631 ~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~~L 702 (707)
........... ..+........... ...+.... .........+.+++.+||+.||++|||++|+++.|
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~---~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L 313 (336)
T 3g2f_A 238 GESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQ-RPKFPEAW---KENSLAVRSLKETIEDCWDQDAEARLTAQXAEERM 313 (336)
T ss_dssp TSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCC-CCCCCTTC---CCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHH
T ss_pred ccchhHHHHhhhcccCCCchHHHHHhhhccccc-CCCCCccc---ccccchHHHHHHHHHHHhcCChhhCcchHHHHHHH
Confidence 33221111000 00000000000000 00000000 01123445789999999999999999999999999
Q ss_pred Hhh
Q 005226 703 ERI 705 (707)
Q Consensus 703 ~~i 705 (707)
+++
T Consensus 314 ~~l 316 (336)
T 3g2f_A 314 AEL 316 (336)
T ss_dssp HHH
T ss_pred HHH
Confidence 987
No 155
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=2.2e-38 Score=331.84 Aligned_cols=250 Identities=21% Similarity=0.261 Sum_probs=191.3
Q ss_pred ceecccCeeEEEEEEeC-CCceEEEEEcCCCch---hhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCcceEEEEeecCC
Q 005226 413 YVLGKSGLGIVYKVVLG-NGIPVAVRRLGEGGE---QRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNG 488 (707)
Q Consensus 413 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~g 488 (707)
+.||+|+||.||+|... +++.||+|++..... ...+.+.+|+.++++++||||+++++++..++..++||||++++
T Consensus 40 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~ 119 (309)
T 2h34_A 40 RLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVDMRLINGV 119 (309)
T ss_dssp EEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCCCE
T ss_pred EEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEEEEecCCC
Confidence 47999999999999965 788999999876532 23477899999999999999999999999999999999999999
Q ss_pred ChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEecccccccccccCCCC
Q 005226 489 NLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNP 568 (707)
Q Consensus 489 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~ 568 (707)
+|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++..........
T Consensus 120 ~L~~~l~~~~-----~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~ 191 (309)
T 2h34_A 120 DLAAMLRRQG-----PLAPPRAVAIVRQIGSALDAAHA---AGATHRDVKPENILVSADDFAYLVDFGIASATTDEKLTQ 191 (309)
T ss_dssp EHHHHHHHHC-----SCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECSCCC-----------
T ss_pred CHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHH---CcCCcCCCChHHEEEcCCCCEEEecCccCcccccccccc
Confidence 9999998643 58999999999999999999999 899999999999999999999999999987654321110
Q ss_pred CCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchhHHHHHHh
Q 005226 569 SSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVRWVKK 648 (707)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~ 648 (707)
.....|+..|+|||.+.. ..++.++||||||+++|||++|+.||.... ...+...+..
T Consensus 192 ---------------~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~g~~pf~~~~------~~~~~~~~~~ 249 (309)
T 2h34_A 192 ---------------LGNTVGTLYYMAPERFSE-SHATYRADIYALTCVLYECLTGSPPYQGDQ------LSVMGAHINQ 249 (309)
T ss_dssp --------------------CCGGGCCGGGTCC-----CCCHHHHHHHHHHHHHHSSCSSCSCH------HHHHHHHHHS
T ss_pred ---------------ccccCCCcCccCHHHHcC-CCCCchHhHHHHHHHHHHHHHCCCCCCCch------HHHHHHHhcc
Confidence 123356899999999765 677899999999999999999999996421 1111111111
Q ss_pred hccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCC-ChHHHHHHHHhh
Q 005226 649 GFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRP-RMKNVSENLERI 705 (707)
Q Consensus 649 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-s~~~v~~~L~~i 705 (707)
.... ... ........+.+++.+||+.||++|| +++++++.|+++
T Consensus 250 ~~~~----~~~---------~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~ 294 (309)
T 2h34_A 250 AIPR----PST---------VRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAA 294 (309)
T ss_dssp CCCC----GGG---------TSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHT
T ss_pred CCCC----ccc---------cCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHH
Confidence 1110 000 0112234578899999999999999 999999999875
No 156
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=6e-39 Score=348.08 Aligned_cols=268 Identities=21% Similarity=0.226 Sum_probs=201.6
Q ss_pred ceecccCeeEEEEEEeC-CCceEEEEEcCCCc-hhhHHHHHHHHHHHHhcCCCceeeeEEEEEcCC--cceEEEEeecCC
Q 005226 413 YVLGKSGLGIVYKVVLG-NGIPVAVRRLGEGG-EQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPD--EKLLISDFISNG 488 (707)
Q Consensus 413 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~--~~~lV~e~~~~g 488 (707)
+.||+|+||+||+|... +++.||||++.... ....+.+.+|++++++++||||+++++++...+ ..++||||+++|
T Consensus 15 ~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~e~~~~g 94 (396)
T 4eut_A 15 DILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCG 94 (396)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEECCCTTE
T ss_pred EEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEEecCCCC
Confidence 38999999999999975 58999999987643 233467889999999999999999999998765 669999999999
Q ss_pred ChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEE----cCCCCeEEeccccccccccc
Q 005226 489 NLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILL----DNDFQPYISDFGLSRLINIT 564 (707)
Q Consensus 489 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll----~~~~~~kl~DfGla~~~~~~ 564 (707)
+|.+++..... ...+++..++.|+.||+.||+|||+ .+|+||||||+||++ +.++.+||+|||+++.....
T Consensus 95 ~L~~~l~~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~~~ 169 (396)
T 4eut_A 95 SLYTVLEEPSN--AYGLPESEFLIVLRDVVGGMNHLRE---NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDD 169 (396)
T ss_dssp EHHHHTTSGGG--TTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEEEECTTSCEEEEECCGGGCEECCCG
T ss_pred CHHHHHHhhhc--ccCCCHHHHHHHHHHHHHHHHHHHH---CCEEECCcCHHHEEEeecCCCceeEEEecCCCceEccCC
Confidence 99999986531 2349999999999999999999999 899999999999999 77888999999999876432
Q ss_pred CCCCCCCCCCcCCCCCCCCccccccCccccCCCCCCC-------CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCc
Q 005226 565 GNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVP-------GNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSI 637 (707)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-------~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~ 637 (707)
... ....||..|+|||++.. ...++.++|||||||++|||++|+.||.......
T Consensus 170 ~~~-----------------~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~-- 230 (396)
T 4eut_A 170 EQF-----------------VSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPR-- 230 (396)
T ss_dssp GGS-----------------SCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTT--
T ss_pred Ccc-----------------ccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCccc--
Confidence 211 12346899999998542 1356789999999999999999999997543321
Q ss_pred cchhHHHHHHhhccccCCCchhch---------HHH-HhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHHhh
Q 005226 638 EVPDLVRWVKKGFEEENPLSDMVD---------AML-LQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERI 705 (707)
Q Consensus 638 ~~~~~~~~~~~~~~~~~~~~~~~d---------~~l-~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~~L~~i 705 (707)
........+......... ..... ..+ ............+.+++.+||+.||++||++.++++.++++
T Consensus 231 ~~~~~~~~~~~~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~i 307 (396)
T 4eut_A 231 RNKEVMYKIITGKPSGAI-SGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDI 307 (396)
T ss_dssp TCHHHHHHHHHSCCTTCC-EEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHH
T ss_pred chHHHHHHHhcCCCcccc-hhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHH
Confidence 111111111111110000 00000 000 00011245556788999999999999999999999999876
No 157
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=4.5e-39 Score=332.47 Aligned_cols=241 Identities=24% Similarity=0.378 Sum_probs=194.2
Q ss_pred cceecccCeeEEEEEEeC-CCceEEEEEcCCCchhhHHHHHHHHHHHHhcCCCceeeeEEEEEc----------------
Q 005226 412 AYVLGKSGLGIVYKVVLG-NGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWA---------------- 474 (707)
Q Consensus 412 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~---------------- 474 (707)
.+.||+|+||.||+|... +++.||+|++.... ..+.+|++++++++||||+++++++..
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (284)
T 2a19_B 16 IELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSK 91 (284)
T ss_dssp EEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC---------CCE
T ss_pred eeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccccccccccC
Confidence 357999999999999975 78999999987543 456789999999999999999998864
Q ss_pred CCcceEEEEeecCCChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEec
Q 005226 475 PDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISD 554 (707)
Q Consensus 475 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~D 554 (707)
....++||||+++|+|.+++.... ...+++..++.++.||+.||+|||+ .+|+||||||+||+++.++.+||+|
T Consensus 92 ~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~D 165 (284)
T 2a19_B 92 TKCLFIQMEFCDKGTLEQWIEKRR---GEKLDKVLALELFEQITKGVDYIHS---KKLINRDLKPSNIFLVDTKQVKIGD 165 (284)
T ss_dssp EEEEEEEECCCCSCBHHHHHHHGG---GSCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEEECC
T ss_pred cceEEEEEeccCCCCHHHHHhhcc---CCCCCHHHHHHHHHHHHHHHHHHHh---CCeeeccCCHHHEEEcCCCCEEECc
Confidence 344789999999999999997543 2368999999999999999999999 8999999999999999999999999
Q ss_pred ccccccccccCCCCCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCC
Q 005226 555 FGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTS 634 (707)
Q Consensus 555 fGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~ 634 (707)
||+++........ ....|++.|+|||.+.. ..++.++||||||+++|||++|..|+..
T Consensus 166 fg~~~~~~~~~~~-----------------~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~~~~~~~~---- 223 (284)
T 2a19_B 166 FGLVTSLKNDGKR-----------------TRSKGTLRYMSPEQISS-QDYGKEVDLYALGLILAELLHVCDTAFE---- 223 (284)
T ss_dssp CTTCEESSCCSCC-----------------CCCCSCCTTSCHHHHHC-SCCCTHHHHHHHHHHHHHHHSCCSSHHH----
T ss_pred chhheeccccccc-----------------cccCCcccccChhhhcc-CCCcchhhhHHHHHHHHHHHhcCCcchh----
Confidence 9999876532211 22346899999998664 6778999999999999999999988631
Q ss_pred CCccchhHHHHHHhhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHHhhc
Q 005226 635 TSIEVPDLVRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERIG 706 (707)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~~L~~i~ 706 (707)
.......... .. +.+. ....+.+++.+||+.||++||++.++++.|+.++
T Consensus 224 ----~~~~~~~~~~---~~--~~~~-------------~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~ 273 (284)
T 2a19_B 224 ----TSKFFTDLRD---GI--ISDI-------------FDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWK 273 (284)
T ss_dssp ----HHHHHHHHHT---TC--CCTT-------------SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHT
T ss_pred ----HHHHHHHhhc---cc--cccc-------------CCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHh
Confidence 1111111111 00 1111 1234678999999999999999999999998875
No 158
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=2.4e-39 Score=342.98 Aligned_cols=237 Identities=20% Similarity=0.254 Sum_probs=193.0
Q ss_pred cceecccCeeEEEEEEe-CCCceEEEEEcCCCch--------hhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCcceEEE
Q 005226 412 AYVLGKSGLGIVYKVVL-GNGIPVAVRRLGEGGE--------QRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLIS 482 (707)
Q Consensus 412 ~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~ 482 (707)
.+.||+|+||.||+|.. .++..||||++..... .....+.+|++++++++||||+++++++.+.+..++||
T Consensus 29 ~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~ 108 (335)
T 3dls_A 29 MSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQGFFQLVM 108 (335)
T ss_dssp EEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred EeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCCEEEEEE
Confidence 35799999999999985 4789999999876431 12346788999999999999999999999999999999
Q ss_pred EeecCC-ChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEecccccccc
Q 005226 483 DFISNG-NLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLI 561 (707)
Q Consensus 483 e~~~~g-sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~ 561 (707)
||+.+| +|.+++.... .+++..+..|+.||+.||+|||+ ++|+||||||+||+++.++.+||+|||+++..
T Consensus 109 e~~~~g~~l~~~~~~~~-----~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~ 180 (335)
T 3dls_A 109 EKHGSGLDLFAFIDRHP-----RLDEPLASYIFRQLVSAVGYLRL---KDIIHRDIKDENIVIAEDFTIKLIDFGSAAYL 180 (335)
T ss_dssp ECCTTSCBHHHHHHTCC-----CCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred EeCCCCccHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHh---CCeEEeccCHHHEEEcCCCcEEEeecccceEC
Confidence 999777 9999998653 59999999999999999999999 89999999999999999999999999999876
Q ss_pred cccCCCCCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchh
Q 005226 562 NITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPD 641 (707)
Q Consensus 562 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~ 641 (707)
...... ....||+.|+|||++......+.++|||||||++|||++|+.||......
T Consensus 181 ~~~~~~-----------------~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~------- 236 (335)
T 3dls_A 181 ERGKLF-----------------YTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET------- 236 (335)
T ss_dssp CTTCCB-----------------CEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG-------
T ss_pred CCCCce-----------------eccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHH-------
Confidence 432110 23457999999999776444588999999999999999999999642110
Q ss_pred HHHHHHhhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHHH
Q 005226 642 LVRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSEN 701 (707)
Q Consensus 642 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~~ 701 (707)
......... .....+.+++.+||+.||++|||+.++++.
T Consensus 237 --------~~~~~~~~~-------------~~~~~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 237 --------VEAAIHPPY-------------LVSKELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp --------TTTCCCCSS-------------CCCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred --------HhhccCCCc-------------ccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000000000 112357799999999999999999999863
No 159
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=2e-38 Score=331.39 Aligned_cols=244 Identities=25% Similarity=0.335 Sum_probs=193.6
Q ss_pred cceecccCeeEEEEEEeC-CCceEEEEEcCCCchhhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCcceEEEEeecCCCh
Q 005226 412 AYVLGKSGLGIVYKVVLG-NGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNL 490 (707)
Q Consensus 412 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL 490 (707)
.+.||+|+||.||++... +|+.||+|.+..........+.+|++++++++||||+++++++.+.+..++||||+++|+|
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 93 (304)
T 2jam_A 14 MEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGEL 93 (304)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBH
T ss_pred eeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEcCCCccH
Confidence 358999999999999975 7899999999866544446789999999999999999999999999999999999999999
Q ss_pred HHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEE---cCCCCeEEecccccccccccCCC
Q 005226 491 ANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILL---DNDFQPYISDFGLSRLINITGNN 567 (707)
Q Consensus 491 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll---~~~~~~kl~DfGla~~~~~~~~~ 567 (707)
.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+||++ +.++.+||+|||+++......
T Consensus 94 ~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~-- 163 (304)
T 2jam_A 94 FDRILERG-----VYTEKDASLVIQQVLSAVKYLHE---NGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGI-- 163 (304)
T ss_dssp HHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHHH---TTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCBT--
T ss_pred HHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEEecCCCCCCEEEccCCcceecCCCc--
Confidence 99997543 58999999999999999999999 899999999999999 788999999999986533110
Q ss_pred CCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchhHHHHHH
Q 005226 568 PSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVRWVK 647 (707)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~ 647 (707)
.....|++.|+|||++.. ..++.++||||||+++|||++|+.||..... ..+.+.+.
T Consensus 164 ----------------~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~g~~pf~~~~~------~~~~~~i~ 220 (304)
T 2jam_A 164 ----------------MSTACGTPGYVAPEVLAQ-KPYSKAVDCWSIGVITYILLCGYPPFYEETE------SKLFEKIK 220 (304)
T ss_dssp ----------------THHHHSCCCBCCTTTBSS-CSCCHHHHHHHHHHHHHHHHHSSCTTTTSCH------HHHHHHHH
T ss_pred ----------------cccccCCCCccChHHhcc-CCCCchhhHHHHHHHHHHHHHCCCCCCCCCH------HHHHHHHH
Confidence 123457999999999764 6788999999999999999999999965321 12222222
Q ss_pred hhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 005226 648 KGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSE 700 (707)
Q Consensus 648 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~ 700 (707)
....... .- ........+.+++.+|++.||++||++.++++
T Consensus 221 ~~~~~~~---~~---------~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (304)
T 2jam_A 221 EGYYEFE---SP---------FWDDISESAKDFICHLLEKDPNERYTCEKALS 261 (304)
T ss_dssp HCCCCCC---TT---------TTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred cCCCCCC---cc---------ccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 2111100 00 00122345789999999999999999999975
No 160
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.3e-38 Score=344.66 Aligned_cols=209 Identities=26% Similarity=0.349 Sum_probs=158.4
Q ss_pred ceecccCeeEEEEEEe-CCCceEEEEEcCCC--chhhHHHHHHHHHHHHhcC-CCceeeeEEEEEcCC--cceEEEEeec
Q 005226 413 YVLGKSGLGIVYKVVL-GNGIPVAVRRLGEG--GEQRHREFVTEVQAIAKVK-HPNIVKLRAYYWAPD--EKLLISDFIS 486 (707)
Q Consensus 413 ~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~--~~~lV~e~~~ 486 (707)
+.||+|+||.||+|.. .+|+.||||++... .......+.+|+.++++++ ||||+++++++..++ ..|+||||++
T Consensus 15 ~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~lv~e~~~ 94 (388)
T 3oz6_A 15 KKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVYLVFDYME 94 (388)
T ss_dssp EC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCEEEEEECCS
T ss_pred EEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEEEEEecccC
Confidence 4799999999999986 47899999998654 3344567889999999996 999999999998654 6799999997
Q ss_pred CCChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEecccccccccccCC
Q 005226 487 NGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGN 566 (707)
Q Consensus 487 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~~ 566 (707)
|+|.+++... .+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+|+.......
T Consensus 95 -~~L~~~~~~~------~~~~~~~~~i~~qi~~~L~~LH~---~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~ 164 (388)
T 3oz6_A 95 -TDLHAVIRAN------ILEPVHKQYVVYQLIKVIKYLHS---GGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRR 164 (388)
T ss_dssp -EEHHHHHHHT------CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEESSSCCC
T ss_pred -cCHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHh---CCEEeCCCCHHHeEEcCCCCEEecCCccccccccccc
Confidence 6999999853 48999999999999999999999 8999999999999999999999999999987643211
Q ss_pred CCCCCCCCc-----CCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Q 005226 567 NPSSSGGFM-----GGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSP 631 (707)
Q Consensus 567 ~~~~~~~~~-----~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~ 631 (707)
......... .............||+.|+|||++.....++.++|||||||++|||++|++||...
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~ 234 (388)
T 3oz6_A 165 VTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGS 234 (388)
T ss_dssp CCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred ccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCC
Confidence 100000000 00000001123468999999999776577899999999999999999999999753
No 161
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=2.3e-38 Score=326.31 Aligned_cols=242 Identities=24% Similarity=0.365 Sum_probs=177.1
Q ss_pred ceecccCeeEEEEEEe-CCCceEEEEEcCCCch---hhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCcceEEEEeecCC
Q 005226 413 YVLGKSGLGIVYKVVL-GNGIPVAVRRLGEGGE---QRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNG 488 (707)
Q Consensus 413 ~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~g 488 (707)
+.||+|+||.||+|.. .+++.||||++..... ...+.+.+|++++++++||||+++++++.+.+..++||||++++
T Consensus 17 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 96 (278)
T 3cok_A 17 NLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNG 96 (278)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEEEECCTTE
T ss_pred eeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEEEecCCCC
Confidence 4799999999999996 5789999999865422 22367899999999999999999999999999999999999999
Q ss_pred ChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEecccccccccccCCCC
Q 005226 489 NLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNP 568 (707)
Q Consensus 489 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~ 568 (707)
+|.+++.... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++..........
T Consensus 97 ~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~ 169 (278)
T 3cok_A 97 EMNRYLKNRV----KPFSENEARHFMHQIITGMLYLHS---HGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKH 169 (278)
T ss_dssp EHHHHHHTCS----SCCCHHHHHHHHHHHHHHHHHHHH---TTEECSSCCGGGEEECTTCCEEECCCTTCEECC------
T ss_pred cHHHHHhhcc----CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCCEEEEeecceeeccCCCCcc
Confidence 9999998643 358999999999999999999999 899999999999999999999999999998654221110
Q ss_pred CCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchhHHHHHHh
Q 005226 569 SSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVRWVKK 648 (707)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~ 648 (707)
....||+.|+|||.+.. ..++.++||||||+++|||++|+.||........ ...
T Consensus 170 ----------------~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~---------~~~ 223 (278)
T 3cok_A 170 ----------------YTLCGTPNYISPEIATR-SAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNT---------LNK 223 (278)
T ss_dssp ---------------------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC--------------
T ss_pred ----------------eeccCCCCcCCcchhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHH---------HHH
Confidence 12356899999998664 6678999999999999999999999975432210 001
Q ss_pred hccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 005226 649 GFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSE 700 (707)
Q Consensus 649 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~ 700 (707)
......... ......+.+++.+||+.||++||+++++++
T Consensus 224 ~~~~~~~~~-------------~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 262 (278)
T 3cok_A 224 VVLADYEMP-------------SFLSIEAKDLIHQLLRRNPADRLSLSSVLD 262 (278)
T ss_dssp CCSSCCCCC-------------TTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred HhhcccCCc-------------cccCHHHHHHHHHHcccCHhhCCCHHHHhc
Confidence 011110000 112245679999999999999999999975
No 162
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=1.6e-38 Score=347.12 Aligned_cols=246 Identities=23% Similarity=0.319 Sum_probs=185.6
Q ss_pred cceecccCeeEEEEEEeC-CCceEEEEEcCCCc--------hhhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCcceEEE
Q 005226 412 AYVLGKSGLGIVYKVVLG-NGIPVAVRRLGEGG--------EQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLIS 482 (707)
Q Consensus 412 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~ 482 (707)
.+.||+|+||+||+|... +++.||||++.... ......+.+|++++++++||||+++++++. .+..++||
T Consensus 140 ~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~-~~~~~lv~ 218 (419)
T 3i6u_A 140 SKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD-AEDYYIVL 218 (419)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE-SSEEEEEE
T ss_pred EeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCceEEEE
Confidence 457999999999999864 67899999986532 112245889999999999999999999975 45579999
Q ss_pred EeecCCChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCC---CCeEEecccccc
Q 005226 483 DFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDND---FQPYISDFGLSR 559 (707)
Q Consensus 483 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~---~~~kl~DfGla~ 559 (707)
||+++|+|.+++.... .+++..+..|+.|++.||+|||+ ++|+||||||+|||++.+ +.+||+|||+++
T Consensus 219 e~~~~g~L~~~l~~~~-----~~~~~~~~~i~~qi~~~l~~LH~---~~ivHrDlkp~NIll~~~~~~~~~kl~DFG~a~ 290 (419)
T 3i6u_A 219 ELMEGGELFDKVVGNK-----RLKEATCKLYFYQMLLAVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK 290 (419)
T ss_dssp ECCTTCBGGGGTSSSC-----CCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESSSSSSCCEEECCSSTTT
T ss_pred EcCCCCcHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChHhEEEecCCCcceEEEeecccce
Confidence 9999999999997543 59999999999999999999999 899999999999999754 459999999998
Q ss_pred cccccCCCCCCCCCCcCCCCCCCCccccccCccccCCCCCCC--CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCc
Q 005226 560 LINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVP--GNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSI 637 (707)
Q Consensus 560 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~ 637 (707)
........ ....||+.|+|||++.. ...++.++|||||||++|||++|+.||......
T Consensus 291 ~~~~~~~~-----------------~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~--- 350 (419)
T 3i6u_A 291 ILGETSLM-----------------RTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQ--- 350 (419)
T ss_dssp SCC----------------------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSS---
T ss_pred ecCCCccc-----------------cccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcch---
Confidence 65422110 23457999999999753 356788999999999999999999999753322
Q ss_pred cchhHHHHHHhhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 005226 638 EVPDLVRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSE 700 (707)
Q Consensus 638 ~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~ 700 (707)
..+.+.+...... ..... .......+.+++.+||+.||++||+++++++
T Consensus 351 --~~~~~~i~~~~~~------~~~~~------~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 399 (419)
T 3i6u_A 351 --VSLKDQITSGKYN------FIPEV------WAEVSEKALDLVKKLLVVDPKARFTTEEALR 399 (419)
T ss_dssp --CCHHHHHHTTCCC------CCHHH------HTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred --HHHHHHHhcCCCC------CCchh------hcccCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence 1222222221110 00000 0122356789999999999999999999986
No 163
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=3.3e-39 Score=350.12 Aligned_cols=248 Identities=18% Similarity=0.203 Sum_probs=193.4
Q ss_pred cceecccCeeEEEEEEeC-CCceEEEEEcCCCc---hhhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCcceEEEEeecC
Q 005226 412 AYVLGKSGLGIVYKVVLG-NGIPVAVRRLGEGG---EQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISN 487 (707)
Q Consensus 412 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~ 487 (707)
.++||+|+||.||+++.. +|+.||+|++++.. ......+.+|.+++.+++||||+++++++.+.+..|+||||+++
T Consensus 66 ~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lVmE~~~g 145 (412)
T 2vd5_A 66 LKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVG 145 (412)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEcCCCC
Confidence 358999999999999975 78999999987532 22335688999999999999999999999999999999999999
Q ss_pred CChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEecccccccccccCCC
Q 005226 488 GNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNN 567 (707)
Q Consensus 488 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~~~ 567 (707)
|+|.+++...+ ..+++..+..++.||+.||+|||+ .+|+||||||+|||++.++++||+|||+++........
T Consensus 146 g~L~~~l~~~~----~~l~~~~~~~~~~qi~~aL~~LH~---~giiHrDLKp~NILld~~g~vkL~DFGla~~~~~~~~~ 218 (412)
T 2vd5_A 146 GDLLTLLSKFG----ERIPAEMARFYLAEIVMAIDSVHR---LGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTV 218 (412)
T ss_dssp CBHHHHHHHHS----SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSCE
T ss_pred CcHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHH---CCeeecccCHHHeeecCCCCEEEeechhheeccCCCcc
Confidence 99999997542 258999999999999999999999 89999999999999999999999999999876432211
Q ss_pred CCCCCCCcCCCCCCCCccccccCccccCCCCCCC------CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchh
Q 005226 568 PSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVP------GNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPD 641 (707)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~ 641 (707)
. .....||+.|+|||++.. ...++.++|||||||++|||++|+.||..... ..
T Consensus 219 ~---------------~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~------~~ 277 (412)
T 2vd5_A 219 R---------------SLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADST------AE 277 (412)
T ss_dssp E---------------CSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSH------HH
T ss_pred c---------------cceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCH------HH
Confidence 0 023467999999998752 35678999999999999999999999965321 11
Q ss_pred HHHHHHhhc-cccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCC---CChHHHHH
Q 005226 642 LVRWVKKGF-EEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVR---PRMKNVSE 700 (707)
Q Consensus 642 ~~~~~~~~~-~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~R---Ps~~~v~~ 700 (707)
....+.... ....+ . .......++.+++.+|+. +|++| |+++|+++
T Consensus 278 ~~~~i~~~~~~~~~p-------~-----~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~ 327 (412)
T 2vd5_A 278 TYGKIVHYKEHLSLP-------L-----VDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRT 327 (412)
T ss_dssp HHHHHHTHHHHCCCC----------------CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHT
T ss_pred HHHHHHhcccCcCCC-------c-----cccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhc
Confidence 111111100 00000 0 001223567899999999 99998 58888864
No 164
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=8.4e-39 Score=341.69 Aligned_cols=249 Identities=25% Similarity=0.302 Sum_probs=194.3
Q ss_pred cceecccCeeEEEEEEe----CCCceEEEEEcCCCc----hhhHHHHHHHHHHHHhc-CCCceeeeEEEEEcCCcceEEE
Q 005226 412 AYVLGKSGLGIVYKVVL----GNGIPVAVRRLGEGG----EQRHREFVTEVQAIAKV-KHPNIVKLRAYYWAPDEKLLIS 482 (707)
Q Consensus 412 ~~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lV~ 482 (707)
.+.||+|+||.||+|.. .+++.||||+++... ....+.+.+|+++++++ +||||+++++++...+..++||
T Consensus 59 ~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~ 138 (355)
T 1vzo_A 59 LKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLIL 138 (355)
T ss_dssp EEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTEEEEEE
T ss_pred EEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCceEEEEe
Confidence 34899999999999997 378999999987542 12335678899999999 6999999999999999999999
Q ss_pred EeecCCChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEeccccccccc
Q 005226 483 DFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLIN 562 (707)
Q Consensus 483 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~ 562 (707)
||+++|+|.+++.... .+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++...
T Consensus 139 e~~~~~~L~~~l~~~~-----~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~ 210 (355)
T 1vzo_A 139 DYINGGELFTHLSQRE-----RFTEHEVQIYVGEIVLALEHLHK---LGIIYRDIKLENILLDSNGHVVLTDFGLSKEFV 210 (355)
T ss_dssp CCCCSCBHHHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEESCSSEEEECC
T ss_pred ecCCCCCHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCcEEEeeCCCCeecc
Confidence 9999999999997643 58999999999999999999999 899999999999999999999999999998654
Q ss_pred ccCCCCCCCCCCcCCCCCCCCccccccCccccCCCCCCCC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchh
Q 005226 563 ITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPG-NRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPD 641 (707)
Q Consensus 563 ~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~ 641 (707)
...... .....||+.|+|||++..+ ..++.++|||||||++|||++|+.||....... .
T Consensus 211 ~~~~~~---------------~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~-----~ 270 (355)
T 1vzo_A 211 ADETER---------------AYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKN-----S 270 (355)
T ss_dssp GGGGGG---------------GCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCC-----C
T ss_pred cCCCCc---------------ccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccc-----h
Confidence 221110 1234579999999997642 457889999999999999999999997543221 1
Q ss_pred HHHHHHhhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCC-----ChHHHHHH
Q 005226 642 LVRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRP-----RMKNVSEN 701 (707)
Q Consensus 642 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~~v~~~ 701 (707)
..............+. ......+.+++.+||+.||++|| +++++++.
T Consensus 271 ~~~~~~~~~~~~~~~~-------------~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h 322 (355)
T 1vzo_A 271 QAEISRRILKSEPPYP-------------QEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEH 322 (355)
T ss_dssp HHHHHHHHHHCCCCCC-------------TTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTS
T ss_pred HHHHHHHHhccCCCCC-------------cccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcC
Confidence 1111111111111111 11224567899999999999999 88888753
No 165
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=4.8e-39 Score=339.27 Aligned_cols=258 Identities=20% Similarity=0.262 Sum_probs=191.3
Q ss_pred ceecccCeeEEEEEEeC-CCceEEEEEcCCCchh-hHHHHHHHHHHHHhcCCCceeeeEEEEEcCCcceEEEEeecCCCh
Q 005226 413 YVLGKSGLGIVYKVVLG-NGIPVAVRRLGEGGEQ-RHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNL 490 (707)
Q Consensus 413 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL 490 (707)
+.||+|+||+||+|... +++.||||++...... ....+.+|++++++++||||+++++++..++..++||||++ |+|
T Consensus 8 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l 86 (324)
T 3mtl_A 8 DKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLD-KDL 86 (324)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEECCS-EEH
T ss_pred EEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecccc-cCH
Confidence 47999999999999975 7899999998754322 22355679999999999999999999999999999999997 599
Q ss_pred HHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEecccccccccccCCCCCC
Q 005226 491 ANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSS 570 (707)
Q Consensus 491 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~~ 570 (707)
.+++.... ..+++..+..++.||+.||+|||+ .+|+||||||+||+++.++.+||+|||+++.........
T Consensus 87 ~~~~~~~~----~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~-- 157 (324)
T 3mtl_A 87 KQYLDDCG----NIINMHNVKLFLFQLLRGLAYCHR---QKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTY-- 157 (324)
T ss_dssp HHHHHHTT----TCCCHHHHHHHHHHHHHHHHHHHH---TTEEESSCCGGGEEECTTCCEEECSSSEEECC---------
T ss_pred HHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCcCHHHEEECCCCCEEEccCcccccccCCcccc--
Confidence 99997653 358999999999999999999999 899999999999999999999999999997554221110
Q ss_pred CCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchhHHHHHHhhc
Q 005226 571 SGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVRWVKKGF 650 (707)
Q Consensus 571 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~ 650 (707)
....||..|+|||++.....++.++|||||||++|||++|+.||..... .+....+....
T Consensus 158 --------------~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~------~~~~~~i~~~~ 217 (324)
T 3mtl_A 158 --------------DNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTV------EEQLHFIFRIL 217 (324)
T ss_dssp -------------------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH------HHHHHHHHHHH
T ss_pred --------------ccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH------HHHHHHHHHHh
Confidence 2235689999999977656789999999999999999999999975321 12222222221
Q ss_pred cccC--CCchhchH-HHHhh-----------hhhHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 005226 651 EEEN--PLSDMVDA-MLLQE-----------VHAKKEVIAVFHLALACTEADPEVRPRMKNVSE 700 (707)
Q Consensus 651 ~~~~--~~~~~~d~-~l~~~-----------~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~ 700 (707)
.... ........ ..... .........+.+++.+|++.||++|||++|+++
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 281 (324)
T 3mtl_A 218 GTPTEETWPGILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMK 281 (324)
T ss_dssp CCCCTTTSTTGGGCHHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred CCCChHhchhhhcchhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhc
Confidence 1110 00111110 00000 000122356789999999999999999999976
No 166
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=1.4e-38 Score=355.83 Aligned_cols=247 Identities=26% Similarity=0.291 Sum_probs=196.8
Q ss_pred cceecccCeeEEEEEEeC-CCceEEEEEcCCCc---hhhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCcceEEEEeecC
Q 005226 412 AYVLGKSGLGIVYKVVLG-NGIPVAVRRLGEGG---EQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISN 487 (707)
Q Consensus 412 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~ 487 (707)
.++||+|+||.||+|... +|+.||+|++.... ......+.+|++++++++||||+++++++.+.+..++||||+++
T Consensus 189 ~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmEy~~g 268 (576)
T 2acx_A 189 YRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNG 268 (576)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEEEEcCCC
Confidence 358999999999999975 78999999986542 22336688999999999999999999999999999999999999
Q ss_pred CChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEecccccccccccCCC
Q 005226 488 GNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNN 567 (707)
Q Consensus 488 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~~~ 567 (707)
|+|.+++.... ...+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++.......
T Consensus 269 g~L~~~l~~~~---~~~l~e~~~~~i~~qIl~aL~yLH~---~gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~~~- 341 (576)
T 2acx_A 269 GDLKFHIYHMG---QAGFPEARAVFYAAEICCGLEDLHR---ERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT- 341 (576)
T ss_dssp CBHHHHHHSSS---SCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTSCEEECCCTTCEECCTTCC-
T ss_pred CcHHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHH---CCEeccCCchheEEEeCCCCeEEEecccceecccCcc-
Confidence 99999998653 2359999999999999999999999 8999999999999999999999999999987642211
Q ss_pred CCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchhHHHHHH
Q 005226 568 PSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVRWVK 647 (707)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~ 647 (707)
.....||+.|+|||++.. ..++.++|||||||++|||++|+.||....... ....+...+.
T Consensus 342 ----------------~~~~~GT~~Y~APEvl~~-~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~--~~~~i~~~i~ 402 (576)
T 2acx_A 342 ----------------IKGRVGTVGYMAPEVVKN-ERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKI--KREEVERLVK 402 (576)
T ss_dssp ----------------EECCCSCGGGCCHHHHTT-CEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCC--CHHHHHHHHH
T ss_pred ----------------ccccCCCccccCHHHHcC-CCCCccchHHHHHHHHHHHHhCCCCCcccccch--hHHHHHHHhh
Confidence 022467999999999765 678899999999999999999999997643321 1111222211
Q ss_pred hhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCC-----ChHHHHH
Q 005226 648 KGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRP-----RMKNVSE 700 (707)
Q Consensus 648 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~~v~~ 700 (707)
.. ...+. ......+.+++.+|++.||.+|| +++||++
T Consensus 403 ~~---~~~~p-------------~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~ 444 (576)
T 2acx_A 403 EV---PEEYS-------------ERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKE 444 (576)
T ss_dssp HC---CCCCC-------------TTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHT
T ss_pred cc---cccCC-------------ccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHh
Confidence 11 10001 11234578999999999999999 6777764
No 167
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=2.4e-38 Score=327.54 Aligned_cols=241 Identities=22% Similarity=0.289 Sum_probs=191.7
Q ss_pred cceecccCeeEEEEEEeC-CCceEEEEEcCCC--chhhHHHHHHHHHHHHhc-CCCceeeeEEEEEcCCcceEEEEeecC
Q 005226 412 AYVLGKSGLGIVYKVVLG-NGIPVAVRRLGEG--GEQRHREFVTEVQAIAKV-KHPNIVKLRAYYWAPDEKLLISDFISN 487 (707)
Q Consensus 412 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lV~e~~~~ 487 (707)
.+.||+|+||+||+|... +++.||+|++... ......++.+|+..+.++ +||||+++++++.+++..++||||+++
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 95 (289)
T 1x8b_A 16 LEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNG 95 (289)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEEEECCTT
T ss_pred hhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEEEecCC
Confidence 348999999999999975 7899999998754 233447788999999999 999999999999999999999999999
Q ss_pred CChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcC-------------------CC
Q 005226 488 GNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDN-------------------DF 548 (707)
Q Consensus 488 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~-------------------~~ 548 (707)
|+|.+++..... ....+++..+..|+.||+.||+|||+ ++|+||||||+||+++. ..
T Consensus 96 ~~L~~~l~~~~~-~~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~~~ 171 (289)
T 1x8b_A 96 GSLADAISENYR-IMSYFKEAELKDLLLQVGRGLRYIHS---MSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKV 171 (289)
T ss_dssp CBHHHHHHHHHH-HTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEC--------------------CC
T ss_pred CcHHHHHHhhcc-cccCCCHHHHHHHHHHHHHHHHHHHh---CCEeecCCCHHHEEEcCCCCCcccccccccccccCCce
Confidence 999999975421 11358999999999999999999999 89999999999999984 44
Q ss_pred CeEEecccccccccccCCCCCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCC
Q 005226 549 QPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPE 628 (707)
Q Consensus 549 ~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~ 628 (707)
.+||+|||.+...... ....||..|+|||++.....++.++||||||+++|||++|.+|+
T Consensus 172 ~~kl~Dfg~~~~~~~~--------------------~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~ 231 (289)
T 1x8b_A 172 MFKIGDLGHVTRISSP--------------------QVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLP 231 (289)
T ss_dssp CEEECCCTTCEETTCS--------------------CCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCC
T ss_pred EEEEcccccccccCCc--------------------cccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCC
Confidence 7999999998865421 12236899999999776556678999999999999999999876
Q ss_pred CCCCCCCCccchhHHHHHHhhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 005226 629 LSPTTSTSIEVPDLVRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSE 700 (707)
Q Consensus 629 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~ 700 (707)
... .....+........ . ......+.+++.+||+.||++|||+.++++
T Consensus 232 ~~~---------~~~~~~~~~~~~~~--~-------------~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 279 (289)
T 1x8b_A 232 RNG---------DQWHEIRQGRLPRI--P-------------QVLSQEFTELLKVMIHPDPERRPSAMALVK 279 (289)
T ss_dssp SSS---------HHHHHHHTTCCCCC--S-------------SCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred cch---------hHHHHHHcCCCCCC--C-------------cccCHHHHHHHHHHhCCCcccCCCHHHHhh
Confidence 321 11111111111110 1 112245789999999999999999999975
No 168
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=2.4e-38 Score=350.32 Aligned_cols=204 Identities=21% Similarity=0.293 Sum_probs=151.3
Q ss_pred cceecccCeeEEEEEEeC-CCceEEEEEcCCC--chhhHHHHHHHHHHHHhcCCCceeeeEEEEEcC-----CcceEEEE
Q 005226 412 AYVLGKSGLGIVYKVVLG-NGIPVAVRRLGEG--GEQRHREFVTEVQAIAKVKHPNIVKLRAYYWAP-----DEKLLISD 483 (707)
Q Consensus 412 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~-----~~~~lV~e 483 (707)
.+.||+|+||+||+|... +++.||||++... .....+.+.+|++++++++|||||++++++... ...|+|||
T Consensus 58 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e 137 (458)
T 3rp9_A 58 RHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLE 137 (458)
T ss_dssp CCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEEEEEC
T ss_pred eeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceEEEEEe
Confidence 348999999999999864 7899999998654 333457889999999999999999999999543 46799999
Q ss_pred eecCCChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEecccccccccc
Q 005226 484 FISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINI 563 (707)
Q Consensus 484 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~ 563 (707)
|+ +|+|.+++.... .+++..+..++.||+.||+|||+ .+||||||||+|||++.++.+||+|||+|+....
T Consensus 138 ~~-~~~L~~~~~~~~-----~l~~~~~~~~~~qi~~aL~~LH~---~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~ 208 (458)
T 3rp9_A 138 IA-DSDFKKLFRTPV-----YLTELHIKTLLYNLLVGVKYVHS---AGILHRDLKPANCLVNQDCSVKVCDFGLARTVDY 208 (458)
T ss_dssp CC-SEEHHHHHHSSC-----CCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTCCEEECCCTTCBCTTS
T ss_pred cc-ccchhhhcccCC-----CCCHHHHHHHHHHHHHHHHHHHh---CCcCCCCCChhhEEECCCCCEeecccccchhccC
Confidence 98 579999998643 59999999999999999999999 8999999999999999999999999999987653
Q ss_pred cCCCCCCCCC----------CcCCCCC-CCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhC
Q 005226 564 TGNNPSSSGG----------FMGGALP-YMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTG 624 (707)
Q Consensus 564 ~~~~~~~~~~----------~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg 624 (707)
.......... ....+.. ........||+.|+|||++..+..++.++|||||||++|||+||
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg 280 (458)
T 3rp9_A 209 PENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNM 280 (458)
T ss_dssp CTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred ccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHh
Confidence 3211110000 0000000 00112346799999999866667899999999999999999994
No 169
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=1.5e-38 Score=340.91 Aligned_cols=244 Identities=25% Similarity=0.295 Sum_probs=185.1
Q ss_pred cceecccCeeEEEEEEeC-CCceEEEEEcCCCch---hhHHHHHHHHHH-HHhcCCCceeeeEEEEEcCCcceEEEEeec
Q 005226 412 AYVLGKSGLGIVYKVVLG-NGIPVAVRRLGEGGE---QRHREFVTEVQA-IAKVKHPNIVKLRAYYWAPDEKLLISDFIS 486 (707)
Q Consensus 412 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~-l~~l~H~niv~l~~~~~~~~~~~lV~e~~~ 486 (707)
.+.||+|+||.||+|+.. +++.||+|+++.... .....+.+|..+ ++.++||||+++++++.+.+..|+||||++
T Consensus 43 ~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~lv~E~~~ 122 (373)
T 2r5t_A 43 LKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYIN 122 (373)
T ss_dssp EEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEEEEECCC
T ss_pred EEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEEEEeCCC
Confidence 348999999999999975 578899999876432 233556777777 567899999999999999999999999999
Q ss_pred CCChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEecccccccccccCC
Q 005226 487 NGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGN 566 (707)
Q Consensus 487 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~~ 566 (707)
+|+|.+++.... .+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++.......
T Consensus 123 gg~L~~~l~~~~-----~~~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~~~ 194 (373)
T 2r5t_A 123 GGELFYHLQRER-----CFLEPRARFYAAEIASALGYLHS---LNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNS 194 (373)
T ss_dssp SCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCCBCGGGBCCCC
T ss_pred CCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCHHHEEECCCCCEEEeeCccccccccCCC
Confidence 999999997643 58999999999999999999999 8999999999999999999999999999986432211
Q ss_pred CCCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchhHHHHH
Q 005226 567 NPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVRWV 646 (707)
Q Consensus 567 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~ 646 (707)
. .....||+.|+|||++.. ..++.++|||||||++|||++|+.||.... ...+.+.+
T Consensus 195 ~----------------~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~ell~G~~Pf~~~~------~~~~~~~i 251 (373)
T 2r5t_A 195 T----------------TSTFCGTPEYLAPEVLHK-QPYDRTVDWWCLGAVLYEMLYGLPPFYSRN------TAEMYDNI 251 (373)
T ss_dssp C----------------CCSBSCCCCCCCHHHHTT-CCCCTHHHHHHHHHHHHHHHHSSCTTCCSB------HHHHHHHH
T ss_pred c----------------cccccCCccccCHHHhCC-CCCCchhhhHHHHHHHHHHHcCCCCCCCCC------HHHHHHHH
Confidence 1 123457999999999765 678999999999999999999999996432 11222211
Q ss_pred HhhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHHHH
Q 005226 647 KKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENL 702 (707)
Q Consensus 647 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~~L 702 (707)
.. ....+. ......+.+++.+|++.||.+||++.+.++.+
T Consensus 252 ~~---~~~~~~-------------~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~i 291 (373)
T 2r5t_A 252 LN---KPLQLK-------------PNITNSARHLLEGLLQKDRTKRLGAKDDFMEI 291 (373)
T ss_dssp HH---SCCCCC-------------SSSCHHHHHHHHHHTCSSGGGSTTTTTTHHHH
T ss_pred Hh---cccCCC-------------CCCCHHHHHHHHHHcccCHHhCCCCCCCHHHH
Confidence 11 111100 11224567899999999999999986544443
No 170
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=5.3e-38 Score=346.86 Aligned_cols=253 Identities=22% Similarity=0.256 Sum_probs=186.4
Q ss_pred ceecccCeeEEEEEEeC-CCceEEEEEcCCC--chhhHHHHHHHHHHHHhcCCCceeeeEEEEEcCC------cceEEEE
Q 005226 413 YVLGKSGLGIVYKVVLG-NGIPVAVRRLGEG--GEQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPD------EKLLISD 483 (707)
Q Consensus 413 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~------~~~lV~e 483 (707)
+.||+|+||+||+|... +++.||||++... .....+.+.+|+.+++.++||||+++++++...+ ..|+|||
T Consensus 68 ~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~lv~E 147 (464)
T 3ttj_A 68 KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME 147 (464)
T ss_dssp EEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCEEEEEEE
T ss_pred EEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCCeEEEEEe
Confidence 47999999999999864 6899999999764 3334577889999999999999999999997654 4599999
Q ss_pred eecCCChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEecccccccccc
Q 005226 484 FISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINI 563 (707)
Q Consensus 484 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~ 563 (707)
|+++ +|.+.+.. .+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+|+....
T Consensus 148 ~~~~-~l~~~~~~-------~l~~~~~~~~~~qil~aL~~lH~---~~iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 216 (464)
T 3ttj_A 148 LMDA-NLCQVIQM-------ELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT 216 (464)
T ss_dssp CCSE-EHHHHHTS-------CCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCCCC-----
T ss_pred CCCC-CHHHHHhh-------cCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChHhEEEeCCCCEEEEEEEeeeecCC
Confidence 9975 57777753 38999999999999999999999 8999999999999999999999999999986542
Q ss_pred cCCCCCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchhHH
Q 005226 564 TGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLV 643 (707)
Q Consensus 564 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~~ 643 (707)
.... ....||+.|+|||++.. ..++.++|||||||++|||++|+.||...... +..
T Consensus 217 ~~~~-----------------~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~------~~~ 272 (464)
T 3ttj_A 217 SFMM-----------------TPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMVRHKILFPGRDYI------DQW 272 (464)
T ss_dssp CCCC---------------------CCCTTCCHHHHTT-CCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHH------HHH
T ss_pred Cccc-----------------CCCcccccccCHHHHcC-CCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHH------HHH
Confidence 2110 23457999999999775 67899999999999999999999999753211 111
Q ss_pred HHHHhhc-------------------cccCCCchhchHHH-Hh------hhhhHHHHHHHHHHHHhccCCCCCCCCChHH
Q 005226 644 RWVKKGF-------------------EEENPLSDMVDAML-LQ------EVHAKKEVIAVFHLALACTEADPEVRPRMKN 697 (707)
Q Consensus 644 ~~~~~~~-------------------~~~~~~~~~~d~~l-~~------~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~ 697 (707)
..+.... ..........-+.. .. .........++.+|+.+||..||++|||++|
T Consensus 273 ~~i~~~lg~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e 352 (464)
T 3ttj_A 273 NKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDD 352 (464)
T ss_dssp HHHHHHHCSCCHHHHTTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHH
T ss_pred HHHHHhcCCCCHHHHHHcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHH
Confidence 1111100 00000000000000 00 0001122467899999999999999999999
Q ss_pred HHH
Q 005226 698 VSE 700 (707)
Q Consensus 698 v~~ 700 (707)
+++
T Consensus 353 ~L~ 355 (464)
T 3ttj_A 353 ALQ 355 (464)
T ss_dssp HHT
T ss_pred Hhc
Confidence 975
No 171
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.5e-38 Score=338.31 Aligned_cols=251 Identities=22% Similarity=0.305 Sum_probs=186.8
Q ss_pred ceecccCeeEEEEEEe-CCCceEEEEEcCCC--chhhHHHHHHHHHHHHhcCCCceeeeEEEEEcCC------cceEEEE
Q 005226 413 YVLGKSGLGIVYKVVL-GNGIPVAVRRLGEG--GEQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPD------EKLLISD 483 (707)
Q Consensus 413 ~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~------~~~lV~e 483 (707)
+.||+|+||.||+|.. .+|+.||||++... .....+.+.+|++++++++||||+++++++...+ ..++|||
T Consensus 31 ~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~lv~e 110 (367)
T 1cm8_A 31 QPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMP 110 (367)
T ss_dssp EEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCCCEEEEE
T ss_pred EEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCceEEEEEe
Confidence 4799999999999996 47899999998654 2334567899999999999999999999998763 4599999
Q ss_pred eecCCChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEecccccccccc
Q 005226 484 FISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINI 563 (707)
Q Consensus 484 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~ 563 (707)
|+ +++|.+++... .+++..+..++.||+.||+|||+ .+|+||||||+||+++.++.+||+|||+++....
T Consensus 111 ~~-~~~L~~~~~~~------~l~~~~~~~~~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 180 (367)
T 1cm8_A 111 FM-GTDLGKLMKHE------KLGEDRIQFLVYQMLKGLRYIHA---AGIIHRDLKPGNLAVNEDCELKILDFGLARQADS 180 (367)
T ss_dssp CC-SEEHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEECCS
T ss_pred cC-CCCHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHH---CCccccCcCHHHEEEcCCCCEEEEeeeccccccc
Confidence 99 88999999753 48999999999999999999999 8999999999999999999999999999986542
Q ss_pred cCCCCCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchhHH
Q 005226 564 TGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLV 643 (707)
Q Consensus 564 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~~ 643 (707)
.. ....+|+.|+|||++.....++.++||||+||++|||++|+.||..... .+..
T Consensus 181 ~~-------------------~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~------~~~l 235 (367)
T 1cm8_A 181 EM-------------------TGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDH------LDQL 235 (367)
T ss_dssp SC-------------------CSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSH------HHHH
T ss_pred cc-------------------CcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCH------HHHH
Confidence 11 1234689999999877656789999999999999999999999975321 1111
Q ss_pred HHHHhhccccCCCchhch--------HHHHhh---------hhhHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 005226 644 RWVKKGFEEENPLSDMVD--------AMLLQE---------VHAKKEVIAVFHLALACTEADPEVRPRMKNVSE 700 (707)
Q Consensus 644 ~~~~~~~~~~~~~~~~~d--------~~l~~~---------~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~ 700 (707)
..+....... + .+... ..+... .........+.+++.+|+..||++|||++++++
T Consensus 236 ~~i~~~~g~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~ 307 (367)
T 1cm8_A 236 KEIMKVTGTP-P-AEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALA 307 (367)
T ss_dssp HHHHHHHCCC-C-HHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HHHHHhcCCC-C-HHHHHHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhc
Confidence 1111111000 0 00000 000000 000112356789999999999999999999986
No 172
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=5e-38 Score=326.65 Aligned_cols=241 Identities=21% Similarity=0.337 Sum_probs=194.3
Q ss_pred ceecccCeeEEEEEEeC-CCceEEEEEcCCC---chhhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCcceEEEEeecCC
Q 005226 413 YVLGKSGLGIVYKVVLG-NGIPVAVRRLGEG---GEQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNG 488 (707)
Q Consensus 413 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~g 488 (707)
+.||+|+||.||++... +++.||+|++... .....+.+.+|+.++++++||||+++++++.+++..++||||++++
T Consensus 21 ~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 100 (294)
T 2rku_A 21 RFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRR 100 (294)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCTTC
T ss_pred EEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEEEecCCCC
Confidence 48999999999999975 5788999988654 2334577899999999999999999999999999999999999999
Q ss_pred ChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEecccccccccccCCCC
Q 005226 489 NLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNP 568 (707)
Q Consensus 489 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~ 568 (707)
+|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++.........
T Consensus 101 ~L~~~~~~~~-----~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~ 172 (294)
T 2rku_A 101 SLLELHKRRK-----ALTEPEARYYLRQIVLGCQYLHR---NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERK 172 (294)
T ss_dssp BHHHHHHHHC-----SCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEECCSTTCCB
T ss_pred CHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChHhEEEcCCCCEEEEeccCceecccCcccc
Confidence 9999987543 58999999999999999999999 899999999999999999999999999998654222111
Q ss_pred CCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchhHHHHHHh
Q 005226 569 SSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVRWVKK 648 (707)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~ 648 (707)
....||..|+|||.+.. ..++.++||||||+++|||++|+.||..... .+....+.
T Consensus 173 ----------------~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~------~~~~~~~~- 228 (294)
T 2rku_A 173 ----------------KVLCGTPNYIAPEVLSK-KGHSFEVDVWSIGCIMYTLLVGKPPFETSCL------KETYLRIK- 228 (294)
T ss_dssp ----------------CCCCSCCSSCCHHHHTT-SCBCTHHHHHHHHHHHHHHHHSSCTTCCSSH------HHHHHHHH-
T ss_pred ----------------ccccCCCCcCCcchhcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCH------HHHHHHHh-
Confidence 22456899999999654 6678999999999999999999999964321 11111111
Q ss_pred hccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 005226 649 GFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSE 700 (707)
Q Consensus 649 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~ 700 (707)
.....+.. .....+.+++.+||+.||++||+++++++
T Consensus 229 --~~~~~~~~-------------~~~~~~~~li~~~l~~~p~~Rps~~~ll~ 265 (294)
T 2rku_A 229 --KNEYSIPK-------------HINPVAASLIQKMLQTDPTARPTINELLN 265 (294)
T ss_dssp --TTCCCCCT-------------TSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred --hccCCCcc-------------ccCHHHHHHHHHHcccChhhCcCHHHHhh
Confidence 11111111 11235678999999999999999999986
No 173
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=1.3e-38 Score=341.01 Aligned_cols=255 Identities=21% Similarity=0.327 Sum_probs=195.7
Q ss_pred ceecccCeeEEEEEEeC-CCceEEEEEcCCC-chhhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCcceEEEEeecCCCh
Q 005226 413 YVLGKSGLGIVYKVVLG-NGIPVAVRRLGEG-GEQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNL 490 (707)
Q Consensus 413 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL 490 (707)
+.||+|+||+||+|... ++..||+|++... .....+.+.+|++++++++||||+++++++..++..++||||+++|+|
T Consensus 39 ~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L 118 (360)
T 3eqc_A 39 SELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL 118 (360)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEECCCTTCBH
T ss_pred eeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEECCCCCCH
Confidence 47999999999999975 6889999998765 334457899999999999999999999999999999999999999999
Q ss_pred HHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCC-CceecCCCCCCeEEcCCCCeEEecccccccccccCCCCC
Q 005226 491 ANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPR-KFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPS 569 (707)
Q Consensus 491 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~-~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~ 569 (707)
.+++.... .+++..+..++.+++.||+|||+ . +|+||||||+||+++.++.+||+|||+++.......
T Consensus 119 ~~~l~~~~-----~~~~~~~~~i~~~i~~~l~~lh~---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~--- 187 (360)
T 3eqc_A 119 DQVLKKAG-----RIPEQILGKVSIAVIKGLTYLRE---KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA--- 187 (360)
T ss_dssp HHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHH---HHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHC----
T ss_pred HHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHH---hCCEEcCCccHHHEEECCCCCEEEEECCCCcccccccc---
Confidence 99997643 58999999999999999999998 5 899999999999999999999999999976543211
Q ss_pred CCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchhHHHHHHhh
Q 005226 570 SSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVRWVKKG 649 (707)
Q Consensus 570 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~ 649 (707)
....||+.|+|||++.. ..++.++||||||+++|||++|+.||...... .+.......
T Consensus 188 ---------------~~~~gt~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~------~~~~~~~~~ 245 (360)
T 3eqc_A 188 ---------------NSFVGTRSYMSPERLQG-THYSVQSDIWSMGLSLVEMAVGRYPIPPPDAK------ELELMFGCQ 245 (360)
T ss_dssp ------------------CCCCTTCCHHHHTT-CCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHH------HHHHHHC--
T ss_pred ---------------cCCCCCCCeECHHHHcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH------HHHHHhccc
Confidence 12346899999999765 67899999999999999999999999753211 100000000
Q ss_pred -------------------------ccccCCCchhchHHHHhhh---hhHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 005226 650 -------------------------FEEENPLSDMVDAMLLQEV---HAKKEVIAVFHLALACTEADPEVRPRMKNVSE 700 (707)
Q Consensus 650 -------------------------~~~~~~~~~~~d~~l~~~~---~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~ 700 (707)
........+.++....... ........+.+++.+||+.||++|||++++++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 324 (360)
T 3eqc_A 246 VEGDAAETPPRPRTPGRPLNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMV 324 (360)
T ss_dssp ----------------------------CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred ccccCCCCCCCcccCCCcccccccCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence 0000000111111111100 00112346889999999999999999999975
No 174
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=3.8e-38 Score=336.25 Aligned_cols=262 Identities=21% Similarity=0.269 Sum_probs=194.9
Q ss_pred ceecccCeeEEEEEEe-CCCceEEEEEcCCCch--hhHHHHHHHHHHHHhcCCCceeeeEEEEEcC--------CcceEE
Q 005226 413 YVLGKSGLGIVYKVVL-GNGIPVAVRRLGEGGE--QRHREFVTEVQAIAKVKHPNIVKLRAYYWAP--------DEKLLI 481 (707)
Q Consensus 413 ~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--------~~~~lV 481 (707)
+.||+|+||.||+|.. .+|+.||||++..... .....+.+|++++++++||||+++++++... +..++|
T Consensus 23 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~lv 102 (351)
T 3mi9_A 23 AKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLV 102 (351)
T ss_dssp EECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------CEEEEE
T ss_pred EEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCCceEEEE
Confidence 4799999999999997 5789999999865432 2235788999999999999999999999874 457899
Q ss_pred EEeecCCChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEecccccccc
Q 005226 482 SDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLI 561 (707)
Q Consensus 482 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~ 561 (707)
|||+++ +|.+.+.... ..+++..+..|+.||+.||+|||+ .+|+||||||+||+++.++.+||+|||+++..
T Consensus 103 ~e~~~~-~l~~~l~~~~----~~~~~~~~~~i~~qi~~~l~~LH~---~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~ 174 (351)
T 3mi9_A 103 FDFCEH-DLAGLLSNVL----VKFTLSEIKRVMQMLLNGLYYIHR---NKILHRDMKAANVLITRDGVLKLADFGLARAF 174 (351)
T ss_dssp EECCSE-EHHHHHHCTT----SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred EeccCC-CHHHHHhhcc----CCCCHHHHHHHHHHHHHHHHHHHH---CCeeCCCCCHHHEEEcCCCCEEEccchhcccc
Confidence 999975 8888887543 359999999999999999999999 89999999999999999999999999999876
Q ss_pred cccCCCCCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchh
Q 005226 562 NITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPD 641 (707)
Q Consensus 562 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~ 641 (707)
......... ......||+.|+|||++.....++.++|||||||++|||+||+.||..... ..
T Consensus 175 ~~~~~~~~~------------~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~------~~ 236 (351)
T 3mi9_A 175 SLAKNSQPN------------RYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTE------QH 236 (351)
T ss_dssp CCCSSSSCC------------CCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSH------HH
T ss_pred ccccccccc------------ccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCCh------HH
Confidence 532211110 112345799999999877656789999999999999999999999975322 11
Q ss_pred HHHHHHhhccccCC--Cchhch--------------HHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 005226 642 LVRWVKKGFEEENP--LSDMVD--------------AMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSE 700 (707)
Q Consensus 642 ~~~~~~~~~~~~~~--~~~~~d--------------~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~ 700 (707)
....+........+ ....-+ ..+............+.+++.+|++.||++|||++|+++
T Consensus 237 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 311 (351)
T 3mi9_A 237 QLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN 311 (351)
T ss_dssp HHHHHHHHHCCCCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHHHHHHHhCCCChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhC
Confidence 22222211111000 000000 000000000111345789999999999999999999975
No 175
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=1.1e-38 Score=351.57 Aligned_cols=243 Identities=23% Similarity=0.283 Sum_probs=186.0
Q ss_pred cceecccCeeEEEEEEeC-CCceEEEEEcCCC---chhhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCcceEEEEeecC
Q 005226 412 AYVLGKSGLGIVYKVVLG-NGIPVAVRRLGEG---GEQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISN 487 (707)
Q Consensus 412 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~ 487 (707)
.+.||+|+||.||+|... +|..||||++... .......+.+|++++++++||||+++++++...+..++||||+++
T Consensus 153 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~ 232 (446)
T 4ejn_A 153 LKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANG 232 (446)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEEECCCSS
T ss_pred eEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEEEeeCCC
Confidence 458999999999999964 7899999998753 223346678899999999999999999999999999999999999
Q ss_pred CChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEecccccccccccCCC
Q 005226 488 GNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNN 567 (707)
Q Consensus 488 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~~~ 567 (707)
|+|.+++.... .+++..+..++.||+.||+|||+. ++|+||||||+|||++.++.+||+|||+|+........
T Consensus 233 ~~L~~~l~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~--~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~ 305 (446)
T 4ejn_A 233 GELFFHLSRER-----VFSEDRARFYGAEIVSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT 305 (446)
T ss_dssp CBHHHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHHHH--TCCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC----
T ss_pred CcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHhhc--CCEEECCCCHHHEEECCCCCEEEccCCCceeccCCCcc
Confidence 99999997643 589999999999999999999963 58999999999999999999999999999754322111
Q ss_pred CCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchhHHHHHH
Q 005226 568 PSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVRWVK 647 (707)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~ 647 (707)
.....||+.|+|||++.. ..++.++|||||||++|||++|+.||..... ..+...+.
T Consensus 306 ----------------~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~ell~g~~Pf~~~~~------~~~~~~i~ 362 (446)
T 4ejn_A 306 ----------------MKTFCGTPEYLAPEVLED-NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH------EKLFELIL 362 (446)
T ss_dssp -----------------CCSSSCGGGCCHHHHHT-SCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHH
T ss_pred ----------------cccccCCccccCHhhcCC-CCCCCccchhhhHHHHHHHhhCCCCCCCCCH------HHHHHHHH
Confidence 123457999999999755 6789999999999999999999999964321 12222221
Q ss_pred hhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCC-----ChHHHHH
Q 005226 648 KGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRP-----RMKNVSE 700 (707)
Q Consensus 648 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~~v~~ 700 (707)
. ....+. ......+.+++.+||+.||++|| +++|+++
T Consensus 363 ~---~~~~~p-------------~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~ 404 (446)
T 4ejn_A 363 M---EEIRFP-------------RTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ 404 (446)
T ss_dssp H---CCCCCC-------------TTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred h---CCCCCC-------------ccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence 1 111111 11224578999999999999999 9999875
No 176
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=1.6e-38 Score=337.27 Aligned_cols=245 Identities=20% Similarity=0.288 Sum_probs=190.4
Q ss_pred cceecccCeeEEEEEEeC-CCceEEEEEcCCCchhhHHHHHHHHHHHHhc-CCCceeeeEEEEEcCCcceEEEEeecCCC
Q 005226 412 AYVLGKSGLGIVYKVVLG-NGIPVAVRRLGEGGEQRHREFVTEVQAIAKV-KHPNIVKLRAYYWAPDEKLLISDFISNGN 489 (707)
Q Consensus 412 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lV~e~~~~gs 489 (707)
.+.||+|+||.||++... +++.||||++..... .+.+|++++.++ +||||+++++++.+++..++||||+++|+
T Consensus 27 ~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~----~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~gg~ 102 (342)
T 2qr7_A 27 KEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR----DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGE 102 (342)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC----CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCCSCB
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC----ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEeCCCCCc
Confidence 358999999999999975 688999999876532 345688999888 89999999999999999999999999999
Q ss_pred hHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCC----CCeEEecccccccccccC
Q 005226 490 LANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDND----FQPYISDFGLSRLINITG 565 (707)
Q Consensus 490 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~----~~~kl~DfGla~~~~~~~ 565 (707)
|.+++.... .+++..+..++.||+.||+|||+ .+|+||||||+||++.++ +.+||+|||+++......
T Consensus 103 L~~~i~~~~-----~~~~~~~~~~~~qi~~al~~lH~---~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~ 174 (342)
T 2qr7_A 103 LLDKILRQK-----FFSEREASAVLFTITKTVEYLHA---QGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAEN 174 (342)
T ss_dssp HHHHHHTCT-----TCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCTT
T ss_pred HHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHH---CCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcCCC
Confidence 999998653 58999999999999999999999 899999999999998543 359999999998764322
Q ss_pred CCCCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchhHHHH
Q 005226 566 NNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVRW 645 (707)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~ 645 (707)
... ....||+.|+|||++.. ..++.++|||||||++|||++|+.||...... ....+...
T Consensus 175 ~~~----------------~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~---~~~~~~~~ 234 (342)
T 2qr7_A 175 GLL----------------MTPCYTANFVAPEVLER-QGYDAACDIWSLGVLLYTMLTGYTPFANGPDD---TPEEILAR 234 (342)
T ss_dssp CCB----------------CCSSCCSSCCCHHHHHH-HHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTS---CHHHHHHH
T ss_pred Cce----------------eccCCCccccCHHHhcC-CCCCCccCeeeHhHHHHHHhcCCCCCCCCCcC---CHHHHHHH
Confidence 111 22356899999998654 45788999999999999999999999753221 12222222
Q ss_pred HHhhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 005226 646 VKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSE 700 (707)
Q Consensus 646 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~ 700 (707)
+....... .. .........+.+++.+|++.||++||++.++++
T Consensus 235 i~~~~~~~---~~---------~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~ 277 (342)
T 2qr7_A 235 IGSGKFSL---SG---------GYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLR 277 (342)
T ss_dssp HHHCCCCC---CS---------TTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred HccCCccc---Cc---------cccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 22211100 00 000122345789999999999999999999875
No 177
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=4.5e-38 Score=332.65 Aligned_cols=250 Identities=18% Similarity=0.246 Sum_probs=191.7
Q ss_pred ceecccCeeEEEEEEe-CCCceEEEEEcCCCchhhHHHHHHHHHHHHhcC-CCceeeeEEEEEc--CCcceEEEEeecCC
Q 005226 413 YVLGKSGLGIVYKVVL-GNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVK-HPNIVKLRAYYWA--PDEKLLISDFISNG 488 (707)
Q Consensus 413 ~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~--~~~~~lV~e~~~~g 488 (707)
+.||+|+||+||+|.. .+++.||||+++... .+.+.+|++++++++ ||||+++++++.. ....++||||++++
T Consensus 42 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~ 118 (330)
T 3nsz_A 42 RKLGRGKYSEVFEAINITNNEKVVVKILKPVK---KKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNT 118 (330)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEECSCC---HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEEECCCCC
T ss_pred EEecccCCeEEEEEEECCCCcEEEEEEecccc---hHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEEeccCch
Confidence 4899999999999985 578999999987543 367889999999996 9999999999988 56679999999999
Q ss_pred ChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCC-CeEEecccccccccccCCC
Q 005226 489 NLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDF-QPYISDFGLSRLINITGNN 567 (707)
Q Consensus 489 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~-~~kl~DfGla~~~~~~~~~ 567 (707)
+|.+++. .+++..+..++.||+.||+|||+ .+|+||||||+|||++.++ .+||+|||+++........
T Consensus 119 ~l~~~~~--------~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~ 187 (330)
T 3nsz_A 119 DFKQLYQ--------TLTDYDIRFYMYEILKALDYCHS---MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY 187 (330)
T ss_dssp CHHHHGG--------GCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTTTEEEECCCTTCEECCTTCCC
T ss_pred hHHHHHH--------hCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCCcc
Confidence 9999985 38899999999999999999999 8999999999999999776 8999999999865432211
Q ss_pred CCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchhHH----
Q 005226 568 PSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLV---- 643 (707)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~~---- 643 (707)
....++..|+|||++.....++.++|||||||++|||++|+.||...... ...+.
T Consensus 188 -----------------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~----~~~l~~~~~ 246 (330)
T 3nsz_A 188 -----------------NVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN----YDQLVRIAK 246 (330)
T ss_dssp -----------------CSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSH----HHHHHHHHH
T ss_pred -----------------ccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCch----HHHHHHHHH
Confidence 22346889999999776577899999999999999999999999643221 11111
Q ss_pred --------HHHHhhccccCCCchhchHHHH-----------hhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 005226 644 --------RWVKKGFEEENPLSDMVDAMLL-----------QEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSE 700 (707)
Q Consensus 644 --------~~~~~~~~~~~~~~~~~d~~l~-----------~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~ 700 (707)
+++....... ....+..+. ...........+.+++.+|++.||++|||++|+++
T Consensus 247 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~ 319 (330)
T 3nsz_A 247 VLGTEDLYDYIDKYNIEL---DPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME 319 (330)
T ss_dssp HHCHHHHHHHHHHTTCCC---CTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred hcCCchhhhHHHHhcccc---ccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 1111100000 000000000 00001113467889999999999999999999986
No 178
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=3.5e-38 Score=325.81 Aligned_cols=245 Identities=24% Similarity=0.312 Sum_probs=193.6
Q ss_pred cceecccCeeEEEEEEeC-CCceEEEEEcCCCch------hhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCcceEEEEe
Q 005226 412 AYVLGKSGLGIVYKVVLG-NGIPVAVRRLGEGGE------QRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDF 484 (707)
Q Consensus 412 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~ 484 (707)
.+.||+|+||.||+|... +++.||+|.++.... ...+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 10 ~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 89 (283)
T 3bhy_A 10 GEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILEL 89 (283)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred HHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEEEEEee
Confidence 358999999999999976 689999998865421 1247899999999999999999999999999999999999
Q ss_pred ecCCChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCC----CeEEeccccccc
Q 005226 485 ISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDF----QPYISDFGLSRL 560 (707)
Q Consensus 485 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~----~~kl~DfGla~~ 560 (707)
+++++|.+++.... .+++..+..++.||+.||+|||+ .+|+||||||+||+++.++ .+||+|||+++.
T Consensus 90 ~~~~~L~~~l~~~~-----~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~ 161 (283)
T 3bhy_A 90 VSGGELFDFLAEKE-----SLTEDEATQFLKQILDGVHYLHS---KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHK 161 (283)
T ss_dssp CCSCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCSSSSSCCEEECCCTTCEE
T ss_pred cCCCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCChHHEEEecCCCCCCceEEEeccccee
Confidence 99999999997543 58999999999999999999999 8999999999999998877 899999999986
Q ss_pred ccccCCCCCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccch
Q 005226 561 INITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVP 640 (707)
Q Consensus 561 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~ 640 (707)
....... ....+++.|+|||++.. ..++.++||||||+++|||++|+.||..... .
T Consensus 162 ~~~~~~~-----------------~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~g~~p~~~~~~------~ 217 (283)
T 3bhy_A 162 IEAGNEF-----------------KNIFGTPEFVAPEIVNY-EPLGLEADMWSIGVITYILLSGASPFLGETK------Q 217 (283)
T ss_dssp CC-------------------------CCCGGGCCHHHHTT-CCCCTHHHHHHHHHHHHHHHHSSCTTCCSSH------H
T ss_pred ccCCCcc-----------------cccCCCcCccCcceecC-CCCCcchhhhhHHHHHHHHHHCCCCCCCcch------H
Confidence 5432111 12346889999998654 6788999999999999999999999965321 1
Q ss_pred hHHHHHHhhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 005226 641 DLVRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSE 700 (707)
Q Consensus 641 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~ 700 (707)
.....+... ... .+... .......+.+++.+||+.||++||++.++++
T Consensus 218 ~~~~~~~~~---~~~----~~~~~-----~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 265 (283)
T 3bhy_A 218 ETLTNISAV---NYD----FDEEY-----FSNTSELAKDFIRRLLVKDPKRRMTIAQSLE 265 (283)
T ss_dssp HHHHHHHTT---CCC----CCHHH-----HTTCCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred HHHHHhHhc---ccC----Ccchh-----cccCCHHHHHHHHHHccCCHhHCcCHHHHHh
Confidence 111111111 100 01111 0122346789999999999999999999987
No 179
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=3.1e-38 Score=328.13 Aligned_cols=248 Identities=25% Similarity=0.329 Sum_probs=193.2
Q ss_pred ceecccCeeEEEEEEe-CCCceEEEEEcCCCchhhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCcceEEEEeecCCChH
Q 005226 413 YVLGKSGLGIVYKVVL-GNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLA 491 (707)
Q Consensus 413 ~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL~ 491 (707)
.+||+|+||.||+|.. .++..||||.+........+.+.+|+.++++++||||+++++++...+..++||||+++|+|.
T Consensus 28 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 107 (295)
T 2clq_A 28 VVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLS 107 (295)
T ss_dssp CEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCSEEEHH
T ss_pred EEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCCCCCHH
Confidence 4899999999999996 468899999987765555578999999999999999999999999999999999999999999
Q ss_pred HHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcC-CCCeEEecccccccccccCCCCCC
Q 005226 492 NALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDN-DFQPYISDFGLSRLINITGNNPSS 570 (707)
Q Consensus 492 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~-~~~~kl~DfGla~~~~~~~~~~~~ 570 (707)
+++....+ ...+++..+..++.||+.||+|||+ .+|+||||||+||+++. ++.+||+|||+++........
T Consensus 108 ~~l~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~--- 179 (295)
T 2clq_A 108 ALLRSKWG--PLKDNEQTIGFYTKQILEGLKYLHD---NQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPC--- 179 (295)
T ss_dssp HHHHHTTC--CCTTCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC-------
T ss_pred HHHHhhcc--CCCccHHHHHHHHHHHHHHHHHHHh---CCEEccCCChhhEEEECCCCCEEEeecccccccCCCCCc---
Confidence 99986532 2357899999999999999999999 89999999999999987 899999999999865422110
Q ss_pred CCCCcCCCCCCCCccccccCccccCCCCCCCC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchhHHHHHHhh
Q 005226 571 SGGFMGGALPYMKPVQTEKTNNYRAPEARVPG-NRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVRWVKKG 649 (707)
Q Consensus 571 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~ 649 (707)
.....|+..|+|||++..+ ..++.++||||||+++|||++|+.||...... ....+....
T Consensus 180 -------------~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~------~~~~~~~~~ 240 (295)
T 2clq_A 180 -------------TETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEP------QAAMFKVGM 240 (295)
T ss_dssp --------------CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSH------HHHHHHHHH
T ss_pred -------------ccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCch------hHHHHhhcc
Confidence 0223568999999986542 23688999999999999999999998642211 111111111
Q ss_pred ccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 005226 650 FEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSE 700 (707)
Q Consensus 650 ~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~ 700 (707)
......+. ......+.+++.+||+.||++||++.++++
T Consensus 241 ~~~~~~~~-------------~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 278 (295)
T 2clq_A 241 FKVHPEIP-------------ESMSAEAKAFILKCFEPDPDKRACANDLLV 278 (295)
T ss_dssp HCCCCCCC-------------TTSCHHHHHHHHHTTCSSTTTSCCHHHHHT
T ss_pred cccccccc-------------ccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 11111101 112345778999999999999999999975
No 180
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=5.4e-38 Score=323.17 Aligned_cols=241 Identities=26% Similarity=0.362 Sum_probs=188.5
Q ss_pred ceecccCeeEEEEEEeC-CCceEEEEEcCCCc---hhhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCcceEEEEeecCC
Q 005226 413 YVLGKSGLGIVYKVVLG-NGIPVAVRRLGEGG---EQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNG 488 (707)
Q Consensus 413 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~g 488 (707)
+.||+|+||.||+|... +++.||||++.... ....+.+.+|++++++++||||+++++++...+..++||||++++
T Consensus 17 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 96 (276)
T 2h6d_A 17 DTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGG 96 (276)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCCSC
T ss_pred eeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEEEeccCCC
Confidence 47999999999999975 78999999986542 123467889999999999999999999999999999999999999
Q ss_pred ChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEecccccccccccCCCC
Q 005226 489 NLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNP 568 (707)
Q Consensus 489 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~ 568 (707)
+|.+++.... .+++..+..++.||+.||+|||+ .+|+||||||+||+++.++.+||+|||++.........
T Consensus 97 ~L~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~- 167 (276)
T 2h6d_A 97 ELFDYICKHG-----RVEEMEARRLFQQILSAVDYCHR---HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFL- 167 (276)
T ss_dssp BHHHHHHHHC-----SCCHHHHHHHHHHHHHHHHHHHH---HCSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC-----
T ss_pred cHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCChhhEEECCCCCEEEeecccccccCCCcce-
Confidence 9999997643 58999999999999999999999 89999999999999999999999999999765422110
Q ss_pred CCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchhHHHHHHh
Q 005226 569 SSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVRWVKK 648 (707)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~ 648 (707)
....+++.|+|||.+......+.++||||||+++|||++|+.||.... ...+.+.+..
T Consensus 168 ----------------~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~------~~~~~~~~~~ 225 (276)
T 2h6d_A 168 ----------------RTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEH------VPTLFKKIRG 225 (276)
T ss_dssp -------------------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHH
T ss_pred ----------------ecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCc------HHHHHHHhhc
Confidence 123468899999997764445689999999999999999999986421 1122222222
Q ss_pred hccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 005226 649 GFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSE 700 (707)
Q Consensus 649 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~ 700 (707)
... .+. ......+.+++.+|++.||++||++.++++
T Consensus 226 ~~~---~~~-------------~~~~~~l~~li~~~l~~~p~~Rps~~~~l~ 261 (276)
T 2h6d_A 226 GVF---YIP-------------EYLNRSVATLLMHMLQVDPLKRATIKDIRE 261 (276)
T ss_dssp CCC---CCC-------------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred Ccc---cCc-------------hhcCHHHHHHHHHHccCChhhCCCHHHHHh
Confidence 111 001 111245678999999999999999999986
No 181
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=2.8e-38 Score=334.51 Aligned_cols=258 Identities=22% Similarity=0.303 Sum_probs=192.4
Q ss_pred ceecccCeeEEEEEEeC-CCceEEEEEcCCCc--hhhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCcceEEEEeecCCC
Q 005226 413 YVLGKSGLGIVYKVVLG-NGIPVAVRRLGEGG--EQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGN 489 (707)
Q Consensus 413 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gs 489 (707)
+.||+|+||.||+|... +++.||||++.... ....+.+.+|++++++++||||+++++++.+.+..++||||+++++
T Consensus 31 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 110 (331)
T 4aaa_A 31 GLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTI 110 (331)
T ss_dssp EEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCSEEH
T ss_pred eEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEEecCCcch
Confidence 48999999999999975 58999999886543 2334668899999999999999999999999999999999999999
Q ss_pred hHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEecccccccccccCCCCC
Q 005226 490 LANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPS 569 (707)
Q Consensus 490 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~ 569 (707)
|.+++.... .+++..+..++.||+.||+|||+ .+|+||||||+||+++.++.+||+|||+++.........
T Consensus 111 l~~~~~~~~-----~~~~~~~~~~~~qi~~~l~~LH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~- 181 (331)
T 4aaa_A 111 LDDLELFPN-----GLDYQVVQKYLFQIINGIGFCHS---HNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVY- 181 (331)
T ss_dssp HHHHHHSTT-----CCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCTTC-----------
T ss_pred HHHHHhhcc-----CCCHHHHHHHHHHHHHHHHHHHH---CCEEccCcChheEEEcCCCcEEEEeCCCceeecCCcccc-
Confidence 999877543 59999999999999999999999 899999999999999999999999999997654322111
Q ss_pred CCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchhHHHHHHhh
Q 005226 570 SSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVRWVKKG 649 (707)
Q Consensus 570 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~ 649 (707)
....||..|+|||++.....++.++|||||||++|||++|+.||...... ..+.......
T Consensus 182 ---------------~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-----~~~~~~~~~~ 241 (331)
T 4aaa_A 182 ---------------DDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDI-----DQLYHIMMCL 241 (331)
T ss_dssp -----------------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-----HHHHHHHHHH
T ss_pred ---------------CCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcH-----HHHHHHHHHh
Confidence 22346889999999776557899999999999999999999999653211 1111111100
Q ss_pred cc---------------ccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 005226 650 FE---------------EENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSE 700 (707)
Q Consensus 650 ~~---------------~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~ 700 (707)
.. ....+....+..-. ..........+.+++.+||+.||++|||++|+++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 306 (331)
T 4aaa_A 242 GNLIPRHQELFNKNPVFAGVRLPEIKEREPL-ERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH 306 (331)
T ss_dssp CSCCHHHHHHHHHCGGGTTCCCCCCSSCCCH-HHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred CCCChhhhhHhhhccccccccCccccccchh-hhcccchhHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 00 00000000000000 0000123466889999999999999999999875
No 182
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=1.5e-38 Score=336.02 Aligned_cols=247 Identities=22% Similarity=0.289 Sum_probs=193.2
Q ss_pred cceecccCeeEEEEEEeC-CCceEEEEEcCCCc--hhhHHHHHHHHHHHHhc-CCCceeeeEEEEEcCCcceEEEEeecC
Q 005226 412 AYVLGKSGLGIVYKVVLG-NGIPVAVRRLGEGG--EQRHREFVTEVQAIAKV-KHPNIVKLRAYYWAPDEKLLISDFISN 487 (707)
Q Consensus 412 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lV~e~~~~ 487 (707)
.+.||+|+||.||+|... +++.||+|++.... ......+.+|+.+++++ +||||+++++++...+..++||||+++
T Consensus 34 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~~lv~e~~~~ 113 (327)
T 3lm5_A 34 SKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAG 113 (327)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEECCTT
T ss_pred cceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeEEEEEEecCC
Confidence 367999999999999965 68999999987643 23357889999999999 569999999999999999999999999
Q ss_pred CChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcC---CCCeEEeccccccccccc
Q 005226 488 GNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDN---DFQPYISDFGLSRLINIT 564 (707)
Q Consensus 488 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~---~~~~kl~DfGla~~~~~~ 564 (707)
|+|.+++.... ...+++..+..++.|++.||+|||+ .+|+||||||+||+++. ++.+||+|||+++.....
T Consensus 114 ~~L~~~~~~~~---~~~~~~~~~~~i~~ql~~~L~~LH~---~givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~ 187 (327)
T 3lm5_A 114 GEIFSLCLPEL---AEMVSENDVIRLIKQILEGVYYLHQ---NNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHA 187 (327)
T ss_dssp EEGGGGGSSCC----CCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEESCBTTBCCEEECCGGGCEEC---
T ss_pred CcHHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHH---CCeecCcCChHHEEEecCCCCCcEEEeeCccccccCCc
Confidence 99999996542 2469999999999999999999999 89999999999999998 789999999999876422
Q ss_pred CCCCCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchhHHH
Q 005226 565 GNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVR 644 (707)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~ 644 (707)
... ....||+.|+|||++.. ..++.++||||||+++|||++|+.||..... .....
T Consensus 188 ~~~-----------------~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~------~~~~~ 243 (327)
T 3lm5_A 188 CEL-----------------REIMGTPEYLAPEILNY-DPITTATDMWNIGIIAYMLLTHTSPFVGEDN------QETYL 243 (327)
T ss_dssp -----------------------CCCGGGCCHHHHTT-CCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHH
T ss_pred ccc-----------------ccccCCcCccCCeeecC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCc------hHHHH
Confidence 111 12356999999999764 6788999999999999999999999965321 11111
Q ss_pred HHHhhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 005226 645 WVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSE 700 (707)
Q Consensus 645 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~ 700 (707)
.+....... + .. ........+.+++.+||+.||++|||++++++
T Consensus 244 ~i~~~~~~~-~-~~----------~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~ 287 (327)
T 3lm5_A 244 NISQVNVDY-S-EE----------TFSSVSQLATDFIQSLLVKNPEKRPTAEICLS 287 (327)
T ss_dssp HHHHTCCCC-C-TT----------TTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred HHHhccccc-C-ch----------hhcccCHHHHHHHHHHcCCChhhCcCHHHHhC
Confidence 111111100 0 00 00122345779999999999999999999875
No 183
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=4.6e-38 Score=333.35 Aligned_cols=241 Identities=21% Similarity=0.340 Sum_probs=194.4
Q ss_pred ceecccCeeEEEEEEeC-CCceEEEEEcCCC---chhhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCcceEEEEeecCC
Q 005226 413 YVLGKSGLGIVYKVVLG-NGIPVAVRRLGEG---GEQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNG 488 (707)
Q Consensus 413 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~g 488 (707)
+.||+|+||.||++... +++.||+|++... .....+.+.+|+.++++++||||+++++++.+.+..++||||++++
T Consensus 47 ~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 126 (335)
T 2owb_A 47 RFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRR 126 (335)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCTTC
T ss_pred EEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEecCCCC
Confidence 48999999999999975 5788999998654 2334577899999999999999999999999999999999999999
Q ss_pred ChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEecccccccccccCCCC
Q 005226 489 NLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNP 568 (707)
Q Consensus 489 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~ 568 (707)
+|.+++.... .+++.++..++.||+.||+|||+ .+|+||||||+||+++.++.+||+|||+++.........
T Consensus 127 ~L~~~~~~~~-----~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~ 198 (335)
T 2owb_A 127 SLLELHKRRK-----ALTEPEARYYLRQIVLGCQYLHR---NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERK 198 (335)
T ss_dssp BHHHHHHHHC-----SCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTCCEEECCCTTCEECCSTTCCB
T ss_pred CHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHH---CCCEecCCCchhEEEcCCCCEEEeeccCceecccCcccc
Confidence 9999987543 58999999999999999999999 899999999999999999999999999998764222111
Q ss_pred CCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchhHHHHHHh
Q 005226 569 SSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVRWVKK 648 (707)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~ 648 (707)
....||..|+|||++.. ..++.++||||||+++|||++|+.||..... ......+..
T Consensus 199 ----------------~~~~gt~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~g~~pf~~~~~------~~~~~~~~~ 255 (335)
T 2owb_A 199 ----------------KVLCGTPNYIAPEVLSK-KGHSFEVDVWSIGCIMYTLLVGKPPFETSCL------KETYLRIKK 255 (335)
T ss_dssp ----------------CCCCSCCSSCCHHHHHT-SCBCTHHHHHHHHHHHHHHHHSSCTTCCSSH------HHHHHHHHH
T ss_pred ----------------cccCCCccccCHHHhcc-CCCCchhhHHHHHHHHHHHHHCcCCCCCCCH------HHHHHHHhc
Confidence 22456899999998664 6678999999999999999999999964221 111111111
Q ss_pred hccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 005226 649 GFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSE 700 (707)
Q Consensus 649 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~ 700 (707)
....+.. .....+.+++.+||+.||++||++.++++
T Consensus 256 ---~~~~~~~-------------~~~~~~~~li~~~l~~dp~~Rps~~ell~ 291 (335)
T 2owb_A 256 ---NEYSIPK-------------HINPVAASLIQKMLQTDPTARPTINELLN 291 (335)
T ss_dssp ---TCCCCCT-------------TSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred ---CCCCCCc-------------cCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 1111111 11234678999999999999999999976
No 184
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=1.2e-38 Score=337.06 Aligned_cols=257 Identities=23% Similarity=0.266 Sum_probs=187.7
Q ss_pred ceecccCeeEEEEEEeC-CCceEEEEEcCCCch--hhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCcceEEEEeecCCC
Q 005226 413 YVLGKSGLGIVYKVVLG-NGIPVAVRRLGEGGE--QRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGN 489 (707)
Q Consensus 413 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gs 489 (707)
+.||+|+||+||+|... +++.||||++..... ...+.+.+|++++++++||||+++++++.+++..++||||++ |+
T Consensus 40 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~ 118 (329)
T 3gbz_A 40 TKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIFEYAE-ND 118 (329)
T ss_dssp EEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEEEECCS-EE
T ss_pred EEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEEEecCC-CC
Confidence 48999999999999854 789999999975532 224567899999999999999999999999999999999997 59
Q ss_pred hHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEc-----CCCCeEEeccccccccccc
Q 005226 490 LANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLD-----NDFQPYISDFGLSRLINIT 564 (707)
Q Consensus 490 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~-----~~~~~kl~DfGla~~~~~~ 564 (707)
|.+++.... .+++..+..|+.||+.||+|||+ .+|+||||||+|||++ .++.+||+|||+++.....
T Consensus 119 L~~~~~~~~-----~~~~~~~~~i~~ql~~~l~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~~~ 190 (329)
T 3gbz_A 119 LKKYMDKNP-----DVSMRVIKSFLYQLINGVNFCHS---RRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIP 190 (329)
T ss_dssp HHHHHHHCT-----TCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEEC-----CCEEEECCTTHHHHHC--
T ss_pred HHHHHhhcC-----CCCHHHHHHHHHHHHHHHHHHHh---CCEECCCCCHHHEEEecCCCCccceEEECcCCCccccCCc
Confidence 999998653 58999999999999999999999 8999999999999994 4556999999999876422
Q ss_pred CCCCCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchhHHH
Q 005226 565 GNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVR 644 (707)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~ 644 (707)
.... ....||..|+|||++.....++.++|||||||++|||++|+.||..... ...+..
T Consensus 191 ~~~~----------------~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-----~~~~~~ 249 (329)
T 3gbz_A 191 IRQF----------------THEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSE-----IDQLFK 249 (329)
T ss_dssp -------------------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHHH
T ss_pred cccc----------------CCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCH-----HHHHHH
Confidence 1111 2235689999999977656689999999999999999999999965321 111111
Q ss_pred HHHhhcccc-CC-------------CchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 005226 645 WVKKGFEEE-NP-------------LSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSE 700 (707)
Q Consensus 645 ~~~~~~~~~-~~-------------~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~ 700 (707)
.....-... .. +.+.....+.. ........++.+++.+||+.||++|||++|+++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 318 (329)
T 3gbz_A 250 IFEVLGLPDDTTWPGVTALPDWKQSFPKFRGKTLKR-VLGALLDDEGLDLLTAMLEMDPVKRISAKNALE 318 (329)
T ss_dssp HHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCHHH-HHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHHhCCCchhhhhhhhhhhhhhhhhhhhccccHhh-hcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence 111100000 00 00000000000 001112356789999999999999999999986
No 185
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=3.2e-38 Score=329.58 Aligned_cols=242 Identities=22% Similarity=0.338 Sum_probs=195.9
Q ss_pred ceecccCeeEEEEEEe-CCCceEEEEEcCCCc-hhhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCcceEEEEeecCCCh
Q 005226 413 YVLGKSGLGIVYKVVL-GNGIPVAVRRLGEGG-EQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNL 490 (707)
Q Consensus 413 ~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL 490 (707)
+.||+|+||.||+|.. .+++.||||++.... ....+.+.+|+.++++++||||+++++++.+++..++||||+++++|
T Consensus 28 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 107 (303)
T 3a7i_A 28 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSA 107 (303)
T ss_dssp EEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTEEH
T ss_pred hhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEeCCCCcH
Confidence 4799999999999986 468899999986543 33457899999999999999999999999999999999999999999
Q ss_pred HHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEecccccccccccCCCCCC
Q 005226 491 ANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSS 570 (707)
Q Consensus 491 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~~ 570 (707)
.+++... .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++.........
T Consensus 108 ~~~~~~~------~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~--- 175 (303)
T 3a7i_A 108 LDLLEPG------PLDETQIATILREILKGLDYLHS---EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK--- 175 (303)
T ss_dssp HHHHTTS------CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECBTTBCC---
T ss_pred HHHHhcC------CCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCChheEEECCCCCEEEeecccceecCccccc---
Confidence 9999743 58999999999999999999999 89999999999999999999999999999766432111
Q ss_pred CCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchhHHHHHHhhc
Q 005226 571 SGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVRWVKKGF 650 (707)
Q Consensus 571 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~ 650 (707)
.....|+..|+|||++.. ..++.++||||||+++|||++|+.||..... ......+....
T Consensus 176 -------------~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~g~~p~~~~~~------~~~~~~~~~~~ 235 (303)
T 3a7i_A 176 -------------RNTFVGTPFWMAPEVIKQ-SAYDSKADIWSLGITAIELARGEPPHSELHP------MKVLFLIPKNN 235 (303)
T ss_dssp -------------BCCCCSCGGGCCHHHHTT-CCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH------HHHHHHHHHSC
T ss_pred -------------cCccCCCcCccCHHHHhc-CCCCchhhhHHHHHHHHHHccCCCCCCCcCH------HHHHHHhhcCC
Confidence 123356889999999765 6778999999999999999999999864321 12222222111
Q ss_pred cccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHHH
Q 005226 651 EEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSEN 701 (707)
Q Consensus 651 ~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~~ 701 (707)
... +. ......+.+++.+||+.||++|||+.++++.
T Consensus 236 ~~~--~~-------------~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 271 (303)
T 3a7i_A 236 PPT--LE-------------GNYSKPLKEFVEACLNKEPSFRPTAKELLKH 271 (303)
T ss_dssp CCC--CC-------------SSCCHHHHHHHHHHCCSSGGGSCCHHHHTTC
T ss_pred CCC--Cc-------------cccCHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 110 00 1122457899999999999999999999863
No 186
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=4.4e-38 Score=337.36 Aligned_cols=246 Identities=25% Similarity=0.342 Sum_probs=195.2
Q ss_pred cceecccCeeEEEEEEeC-CCceEEEEEcCCCch--------hhHHHHHHHHHHHHhc-CCCceeeeEEEEEcCCcceEE
Q 005226 412 AYVLGKSGLGIVYKVVLG-NGIPVAVRRLGEGGE--------QRHREFVTEVQAIAKV-KHPNIVKLRAYYWAPDEKLLI 481 (707)
Q Consensus 412 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lV 481 (707)
.+.||+|+||.||+|... +|+.||||++..... ...+.+.+|+.+++++ +||||+++++++...+..++|
T Consensus 99 ~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 178 (365)
T 2y7j_A 99 KDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLV 178 (365)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBSSEEEEE
T ss_pred ceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeCCEEEEE
Confidence 368999999999999975 799999999865421 1135688999999999 899999999999999999999
Q ss_pred EEeecCCChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEecccccccc
Q 005226 482 SDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLI 561 (707)
Q Consensus 482 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~ 561 (707)
|||+++|+|.+++.... .+++..+..++.||+.||+|||+ .+|+||||||+||+++.++.+||+|||++...
T Consensus 179 ~e~~~g~~L~~~l~~~~-----~l~~~~~~~i~~qi~~~L~~LH~---~gi~H~Dlkp~NIl~~~~~~ikl~DfG~~~~~ 250 (365)
T 2y7j_A 179 FDLMRKGELFDYLTEKV-----ALSEKETRSIMRSLLEAVSFLHA---NNIVHRDLKPENILLDDNMQIRLSDFGFSCHL 250 (365)
T ss_dssp ECCCTTCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEeCCCCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCCEEEEecCccccc
Confidence 99999999999997542 58999999999999999999999 89999999999999999999999999999876
Q ss_pred cccCCCCCCCCCCcCCCCCCCCccccccCccccCCCCCCC-----CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCC
Q 005226 562 NITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVP-----GNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTS 636 (707)
Q Consensus 562 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~ 636 (707)
...... ....||+.|+|||++.. ...++.++|||||||++|||++|+.||....
T Consensus 251 ~~~~~~-----------------~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~---- 309 (365)
T 2y7j_A 251 EPGEKL-----------------RELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRR---- 309 (365)
T ss_dssp CTTCCB-----------------CCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSS----
T ss_pred CCCccc-----------------ccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCC----
Confidence 532111 22456999999998642 2457889999999999999999999996421
Q ss_pred ccchhHHHHHHhhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 005226 637 IEVPDLVRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSE 700 (707)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~ 700 (707)
.......+...... ...+.. ......+.+++.+|++.||++||++.++++
T Consensus 310 --~~~~~~~i~~~~~~------~~~~~~------~~~~~~~~~li~~~L~~dP~~Rps~~ell~ 359 (365)
T 2y7j_A 310 --QILMLRMIMEGQYQ------FSSPEW------DDRSSTVKDLISRLLQVDPEARLTAEQALQ 359 (365)
T ss_dssp --HHHHHHHHHHTCCC------CCHHHH------SSSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred --HHHHHHHHHhCCCC------CCCccc------ccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 11222222111100 000100 112345789999999999999999999986
No 187
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=1.4e-38 Score=365.36 Aligned_cols=251 Identities=25% Similarity=0.374 Sum_probs=197.9
Q ss_pred hccceecccCeeEEEEEEeC----CCceEEEEEcCCCc-hhhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCcceEEEEe
Q 005226 410 ASAYVLGKSGLGIVYKVVLG----NGIPVAVRRLGEGG-EQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDF 484 (707)
Q Consensus 410 ~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~ 484 (707)
...+.||+|+||.||+|... .+..||||++.... ....+.|.+|+.++++++||||+++++++. ++..++||||
T Consensus 393 ~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~lv~E~ 471 (656)
T 2j0j_A 393 ELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMEL 471 (656)
T ss_dssp EEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEEC
T ss_pred EEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCceEEEEEc
Confidence 34568999999999999864 24679999987643 334478999999999999999999999984 5678999999
Q ss_pred ecCCChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEeccccccccccc
Q 005226 485 ISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINIT 564 (707)
Q Consensus 485 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~~ 564 (707)
+++|+|.+++.... ..+++..++.++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++.....
T Consensus 472 ~~~g~L~~~l~~~~----~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDikp~NILl~~~~~vkL~DFG~a~~~~~~ 544 (656)
T 2j0j_A 472 CTLGELRSFLQVRK----FSLDLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS 544 (656)
T ss_dssp CTTCBHHHHHHHTT----TTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECCCCCCCSCCC-
T ss_pred CCCCcHHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHh---CCccccccchHhEEEeCCCCEEEEecCCCeecCCC
Confidence 99999999998543 358999999999999999999999 89999999999999999999999999999876432
Q ss_pred CCCCCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCCCccchhHH
Q 005226 565 GNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTSIEVPDLV 643 (707)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~ellt-g~~P~~~~~~~~~~~~~~~~ 643 (707)
.... .....+|+.|+|||++.. ..++.++|||||||++|||++ |+.||.... ..+..
T Consensus 545 ~~~~---------------~~~~~~t~~y~aPE~~~~-~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~------~~~~~ 602 (656)
T 2j0j_A 545 TYYK---------------ASKGKLPIKWMAPESINF-RRFTSASDVWMFGVCMWEILMHGVKPFQGVK------NNDVI 602 (656)
T ss_dssp ------------------------CCGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC------HHHHH
T ss_pred ccee---------------ccCCCCCcceeCHHHhcC-CCCCchhhHHHHHHHHHHHHHcCCCCCCCCC------HHHHH
Confidence 2111 122345788999998754 678899999999999999997 999986432 22333
Q ss_pred HHHHhhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHHhh
Q 005226 644 RWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERI 705 (707)
Q Consensus 644 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~~L~~i 705 (707)
..+........+ ......+.+++.+||+.||++||++.++++.|+++
T Consensus 603 ~~i~~~~~~~~~---------------~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~i 649 (656)
T 2j0j_A 603 GRIENGERLPMP---------------PNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 649 (656)
T ss_dssp HHHHHTCCCCCC---------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHHcCCCCCCC---------------ccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 333322211111 11234578999999999999999999999999886
No 188
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=7.2e-38 Score=349.34 Aligned_cols=244 Identities=23% Similarity=0.313 Sum_probs=194.2
Q ss_pred ceecccCeeEEEEEEeC-CCceEEEEEcCCCch---hhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCcceEEEEeecCC
Q 005226 413 YVLGKSGLGIVYKVVLG-NGIPVAVRRLGEGGE---QRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNG 488 (707)
Q Consensus 413 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~g 488 (707)
++||+|+||.||+|... +|+.||+|++..... .....+.+|++++++++||||+++++++.+.+..|+||||+++|
T Consensus 191 ~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmE~~~gg 270 (543)
T 3c4z_A 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGG 270 (543)
T ss_dssp EEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTTC
T ss_pred EEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEEEeccCC
Confidence 47999999999999975 689999999865422 23467889999999999999999999999999999999999999
Q ss_pred ChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEecccccccccccCCCC
Q 005226 489 NLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNP 568 (707)
Q Consensus 489 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~ 568 (707)
+|.+++.... .....+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++.........
T Consensus 271 ~L~~~l~~~~-~~~~~l~e~~~~~~~~qi~~aL~~LH~---~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~~~~~~ 346 (543)
T 3c4z_A 271 DIRYHIYNVD-EDNPGFQEPRAIFYTAQIVSGLEHLHQ---RNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKT 346 (543)
T ss_dssp BHHHHHHTSS-TTSCSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTSCEEECCCTTCEECCTTCCCB
T ss_pred CHHHHHHHhh-cccccccHHHHHHHHHHHHHHHHHHHH---cCCcccCCChHHEEEeCCCCEEEeecceeeeccCCCccc
Confidence 9999997643 123469999999999999999999999 899999999999999999999999999998764322110
Q ss_pred CCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchhHHHHHHh
Q 005226 569 SSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVRWVKK 648 (707)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~ 648 (707)
....||+.|+|||++.. ..++.++|||||||++|||++|+.||....... ....+...+.
T Consensus 347 ----------------~~~~GT~~Y~APE~l~~-~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~--~~~~~~~~i~- 406 (543)
T 3c4z_A 347 ----------------KGYAGTPGFMAPELLLG-EEYDFSVDYFALGVTLYEMIAARGPFRARGEKV--ENKELKQRVL- 406 (543)
T ss_dssp ----------------CCCCSCTTTSCHHHHTT-CCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCC--CHHHHHHHHH-
T ss_pred ----------------ccccCCccccChhhhcC-CCCChHHhcCcchHHHHHHHhCCCCCCCCccch--hHHHHHHHHh-
Confidence 22357999999999765 678999999999999999999999997643221 1112222111
Q ss_pred hccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCCh
Q 005226 649 GFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRM 695 (707)
Q Consensus 649 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~ 695 (707)
.....+. ......+.+++.+||+.||++||++
T Consensus 407 --~~~~~~p-------------~~~s~~~~~li~~lL~~dP~~R~~~ 438 (543)
T 3c4z_A 407 --EQAVTYP-------------DKFSPASKDFCEALLQKDPEKRLGF 438 (543)
T ss_dssp --HCCCCCC-------------TTSCHHHHHHHHHHSCSSGGGSCCC
T ss_pred --hcccCCC-------------cccCHHHHHHHHHhccCCHhHCCCC
Confidence 1111111 1123456789999999999999976
No 189
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=9.8e-39 Score=338.38 Aligned_cols=261 Identities=26% Similarity=0.337 Sum_probs=181.2
Q ss_pred cceecccCeeEEEEEEeC-CCceEEEEEcCCCchhhHHHHHHHHHHHHhcC-CCceeeeEEEEEc--------CCcceEE
Q 005226 412 AYVLGKSGLGIVYKVVLG-NGIPVAVRRLGEGGEQRHREFVTEVQAIAKVK-HPNIVKLRAYYWA--------PDEKLLI 481 (707)
Q Consensus 412 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~--------~~~~~lV 481 (707)
.+.||+|+||.||+|... +++.||||++........+.+.+|+.+++++. ||||+++++++.. ....++|
T Consensus 33 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~~~lv 112 (337)
T 3ll6_A 33 RRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLL 112 (337)
T ss_dssp EEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSEEEEEE
T ss_pred EEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCceEEEE
Confidence 448999999999999964 78999999987666666678999999999995 9999999999953 2346899
Q ss_pred EEeecCCChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCC--ceecCCCCCCeEEcCCCCeEEecccccc
Q 005226 482 SDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRK--FVHGDIKPSNILLDNDFQPYISDFGLSR 559 (707)
Q Consensus 482 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~--iiHrDlk~~NIll~~~~~~kl~DfGla~ 559 (707)
|||+. |+|.+++.... ....+++..++.|+.||+.||+|||+ .+ |+||||||+||+++.++.+||+|||+++
T Consensus 113 ~e~~~-g~L~~~l~~~~--~~~~~~~~~~~~i~~qi~~~l~~LH~---~~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~ 186 (337)
T 3ll6_A 113 TELCK-GQLVEFLKKME--SRGPLSCDTVLKIFYQTCRAVQHMHR---QKPPIIHRDLKVENLLLSNQGTIKLCDFGSAT 186 (337)
T ss_dssp EECCS-EEHHHHHHHHH--TTCSCCHHHHHHHHHHHHHHHHHHHT---SSSCCBCCCCCGGGCEECTTSCEEBCCCTTCB
T ss_pred EEecC-CCHHHHHHHhh--ccCCCCHHHHHHHHHHHHHHHHHHHh---CCCCEEEccCCcccEEECCCCCEEEecCccce
Confidence 99995 79999986522 12359999999999999999999999 67 9999999999999999999999999998
Q ss_pred cccccCCCCCCCCCCcCCCCCCCCccccccCccccCCCCCC--CCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCc
Q 005226 560 LINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARV--PGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSI 637 (707)
Q Consensus 560 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~ 637 (707)
............. ............||+.|+|||++. .+..++.++||||||+++|||++|+.||......
T Consensus 187 ~~~~~~~~~~~~~----~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~--- 259 (337)
T 3ll6_A 187 TISHYPDYSWSAQ----RRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKL--- 259 (337)
T ss_dssp CCSSCC-----------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC---------
T ss_pred eccccCccccccc----ccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHH---
Confidence 7653322110000 000000112345799999999863 3467789999999999999999999999643221
Q ss_pred cchhHHHHHHhhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHHhhc
Q 005226 638 EVPDLVRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERIG 706 (707)
Q Consensus 638 ~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~~L~~i~ 706 (707)
........... . ......+.+++.+||+.||++||++.++++.|+++.
T Consensus 260 ------~~~~~~~~~~~--~-------------~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~ 307 (337)
T 3ll6_A 260 ------RIVNGKYSIPP--H-------------DTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIA 307 (337)
T ss_dssp ------------CCCCT--T-------------CCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred ------HhhcCcccCCc--c-------------cccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 11111111000 0 011123678999999999999999999999998873
No 190
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.6e-38 Score=335.71 Aligned_cols=258 Identities=23% Similarity=0.279 Sum_probs=192.2
Q ss_pred ceecccCeeEEEEEEeC-CCceEEEEEcCCCchh-----hHHHHHHHHHHHHhcCCCceeeeEEEEEcCCcceEEEEeec
Q 005226 413 YVLGKSGLGIVYKVVLG-NGIPVAVRRLGEGGEQ-----RHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFIS 486 (707)
Q Consensus 413 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-----~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~ 486 (707)
+.||+|+||.||+|... +|+.||||++...... ..+.+.+|++++++++||||+++++++.+.+..++||||++
T Consensus 16 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 95 (346)
T 1ua2_A 16 DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFME 95 (346)
T ss_dssp EEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEECCS
T ss_pred eEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCceEEEEEcCC
Confidence 48999999999999975 6899999998754221 12468899999999999999999999999999999999997
Q ss_pred CCChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEecccccccccccCC
Q 005226 487 NGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGN 566 (707)
Q Consensus 487 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~~ 566 (707)
+ +|.+++.... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++.......
T Consensus 96 ~-~l~~~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~ 167 (346)
T 1ua2_A 96 T-DLEVIIKDNS----LVLTPSHIKAYMLMTLQGLEYLHQ---HWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNR 167 (346)
T ss_dssp E-EHHHHHTTCC----SSCCSSHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCCC
T ss_pred C-CHHHHHHhcC----cCCCHHHHHHHHHHHHHHHHHHHH---CCEECCCCCHHHEEEcCCCCEEEEecccceeccCCcc
Confidence 5 8999997643 358889999999999999999999 8999999999999999999999999999986643221
Q ss_pred CCCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchhHHHHH
Q 005226 567 NPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVRWV 646 (707)
Q Consensus 567 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~ 646 (707)
.. ....||+.|+|||++.....++.++|||||||++|||++|.+||..... .+....+
T Consensus 168 ~~----------------~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~------~~~~~~i 225 (346)
T 1ua2_A 168 AY----------------THQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSD------LDQLTRI 225 (346)
T ss_dssp CC----------------CCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHH
T ss_pred cC----------------CcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCH------HHHHHHH
Confidence 11 2345689999999976656688999999999999999999999865321 1111111
Q ss_pred Hhhccc----cCC----CchhchHH----HHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 005226 647 KKGFEE----ENP----LSDMVDAM----LLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSE 700 (707)
Q Consensus 647 ~~~~~~----~~~----~~~~~d~~----l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~ 700 (707)
...... .++ +.+.+... .............+.+++.+|++.||++|||++|+++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 291 (346)
T 1ua2_A 226 FETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALK 291 (346)
T ss_dssp HHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred HHHcCCCChhhhhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhc
Confidence 111100 000 00000000 0000000122356889999999999999999999986
No 191
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=4e-38 Score=329.76 Aligned_cols=257 Identities=22% Similarity=0.256 Sum_probs=190.5
Q ss_pred ceecccCeeEEEEEEe-CCCceEEEEEcCCCc-----hhhHHHHHHHHHHHHhcC---CCceeeeEEEEEcCC-----cc
Q 005226 413 YVLGKSGLGIVYKVVL-GNGIPVAVRRLGEGG-----EQRHREFVTEVQAIAKVK---HPNIVKLRAYYWAPD-----EK 478 (707)
Q Consensus 413 ~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~---H~niv~l~~~~~~~~-----~~ 478 (707)
+.||+|+||+||+|.. .+++.||||++.... ......+.+|++++++++ ||||+++++++.... ..
T Consensus 15 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~~~~~~~~ 94 (308)
T 3g33_A 15 AEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKV 94 (308)
T ss_dssp EEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECCSSSEEEE
T ss_pred EEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeeccCCCCceeE
Confidence 4799999999999995 578999999986332 111246677888877775 999999999998765 36
Q ss_pred eEEEEeecCCChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEeccccc
Q 005226 479 LLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLS 558 (707)
Q Consensus 479 ~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla 558 (707)
++||||+. |+|.+++.... ...+++..+..|+.||+.||+|||+ .+|+||||||+||+++.++.+||+|||++
T Consensus 95 ~lv~e~~~-~~L~~~~~~~~---~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a 167 (308)
T 3g33_A 95 TLVFEHVD-QDLRTYLDKAP---PPGLPAETIKDLMRQFLRGLDFLHA---NCIVHRDLKPENILVTSGGTVKLADFGLA 167 (308)
T ss_dssp EEEEECCC-CBHHHHHHTCC---TTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCTTTEEECTTSCEEECSCSCT
T ss_pred EEEehhhh-cCHHHHHhhcc---CCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEcCCCCEEEeeCccc
Confidence 89999997 69999998654 2349999999999999999999999 89999999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCcc
Q 005226 559 RLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIE 638 (707)
Q Consensus 559 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~ 638 (707)
+....... .....||+.|+|||++.. ..++.++|||||||++|||++|+.||.....
T Consensus 168 ~~~~~~~~-----------------~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~~l~~g~~pf~~~~~----- 224 (308)
T 3g33_A 168 RIYSYQMA-----------------LTPVVVTLWYRAPEVLLQ-STYATPVDMWSVGCIFAEMFRRKPLFCGNSE----- 224 (308)
T ss_dssp TTSTTCCC-----------------SGGGGCCCSSCCHHHHHT-SCCCSTHHHHHHHHHHHHTTTSSCSCCCSSH-----
T ss_pred cccCCCcc-----------------cCCccccccccCchHHcC-CCCCchHHHHHHHHHHHHHHhCCCCCCCCCH-----
Confidence 76542111 133467999999999765 6689999999999999999999999965322
Q ss_pred chhHHHHHHhhccc----cCCCc-hhchHHHHh------hhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 005226 639 VPDLVRWVKKGFEE----ENPLS-DMVDAMLLQ------EVHAKKEVIAVFHLALACTEADPEVRPRMKNVSE 700 (707)
Q Consensus 639 ~~~~~~~~~~~~~~----~~~~~-~~~d~~l~~------~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~ 700 (707)
.+....+...... .++.. ...+..+.. .....+....+.+++.+|++.||++|||+.|+++
T Consensus 225 -~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 296 (308)
T 3g33_A 225 -ADQLGKIFDLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ 296 (308)
T ss_dssp -HHHHHHHHHHHCCCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred -HHHHHHHHHHhCCCChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhc
Confidence 1222222111110 00000 000000000 0000123356789999999999999999999975
No 192
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=1.8e-38 Score=329.16 Aligned_cols=247 Identities=21% Similarity=0.283 Sum_probs=179.0
Q ss_pred ceecccCeeEEEEEEe-CCCceEEEEEcCCCch-h-hHHHHHHHHHHHHhcCCCceeeeEEEEEcCCcceEEEEeecCCC
Q 005226 413 YVLGKSGLGIVYKVVL-GNGIPVAVRRLGEGGE-Q-RHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGN 489 (707)
Q Consensus 413 ~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~-~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gs 489 (707)
+.||+|+||+||+|.. .+++.||||++..... . ..+.+..+...++.++||||+++++++.+++..++||||++ |+
T Consensus 13 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~~-~~ 91 (290)
T 3fme_A 13 MELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMD-TS 91 (290)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEEECCS-EE
T ss_pred HhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEEehhc-cc
Confidence 4799999999999996 4789999999876522 2 22344455555788899999999999999999999999997 58
Q ss_pred hHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCC-CceecCCCCCCeEEcCCCCeEEecccccccccccCCCC
Q 005226 490 LANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPR-KFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNP 568 (707)
Q Consensus 490 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~-~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~ 568 (707)
|.+++.... .....+++..+..|+.|++.||+|||+ + +|+||||||+||+++.++.+||+|||+++........
T Consensus 92 l~~~l~~~~-~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~- 166 (290)
T 3fme_A 92 LDKFYKQVI-DKGQTIPEDILGKIAVSIVKALEHLHS---KLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAK- 166 (290)
T ss_dssp HHHHHHHHH-HTTCCCCHHHHHHHHHHHHHHHHHHHH---HSCCCCCCCSGGGCEECTTCCEEBCCC-------------
T ss_pred hHHHHHHHH-hcCCCCCHHHHHHHHHHHHHHHHHHhh---cCCeecCCCCHHHEEECCCCCEEEeecCCcccccccccc-
Confidence 888875421 012369999999999999999999999 6 9999999999999999999999999999766432211
Q ss_pred CCCCCCcCCCCCCCCccccccCccccCCCCC---CCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchhHHHH
Q 005226 569 SSSGGFMGGALPYMKPVQTEKTNNYRAPEAR---VPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVRW 645 (707)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~---~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~ 645 (707)
....||+.|+|||++ ..+..++.++||||||+++|||+||+.||..... ....+...
T Consensus 167 ----------------~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~----~~~~~~~~ 226 (290)
T 3fme_A 167 ----------------DIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGT----PFQQLKQV 226 (290)
T ss_dssp -------------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSC----HHHHHHHH
T ss_pred ----------------cccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCc----hHHHHHHH
Confidence 123468899999986 2446788999999999999999999999964221 11112222
Q ss_pred HHhhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 005226 646 VKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSE 700 (707)
Q Consensus 646 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~ 700 (707)
........ + .......+.+++.+|++.||++|||+.++++
T Consensus 227 ~~~~~~~~-~--------------~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~ 266 (290)
T 3fme_A 227 VEEPSPQL-P--------------ADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 266 (290)
T ss_dssp HHSCCCCC-C--------------TTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred hccCCCCc-c--------------cccCCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence 11111110 0 0112345789999999999999999999976
No 193
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=9.3e-38 Score=342.54 Aligned_cols=208 Identities=22% Similarity=0.307 Sum_probs=162.5
Q ss_pred ceecccCeeEEEEEEeC-CCceEEEEEcCCC--chhhHHHHHHHHHHHHhcCCCceeeeEEEEEcC-----CcceEEEEe
Q 005226 413 YVLGKSGLGIVYKVVLG-NGIPVAVRRLGEG--GEQRHREFVTEVQAIAKVKHPNIVKLRAYYWAP-----DEKLLISDF 484 (707)
Q Consensus 413 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~-----~~~~lV~e~ 484 (707)
+.||+|+||.||+|... +++.||||++... .....+.+.+|++++++++||||+++++++... +..|+||||
T Consensus 32 ~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~lv~e~ 111 (432)
T 3n9x_A 32 HLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDELYIVLEI 111 (432)
T ss_dssp EEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEEEEEEC
T ss_pred EEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCeEEEEEec
Confidence 48999999999999964 6889999999764 233457889999999999999999999999776 567999999
Q ss_pred ecCCChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEeccccccccccc
Q 005226 485 ISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINIT 564 (707)
Q Consensus 485 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~~ 564 (707)
+. |+|.+++.... .+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+|+.....
T Consensus 112 ~~-~~L~~~~~~~~-----~l~~~~~~~i~~qil~aL~~LH~---~givHrDlkp~NILl~~~~~~kL~DFGla~~~~~~ 182 (432)
T 3n9x_A 112 AD-SDLKKLFKTPI-----FLTEEHIKTILYNLLLGENFIHE---SGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSE 182 (432)
T ss_dssp CS-EEHHHHHHSSC-----CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEEC---
T ss_pred CC-cCHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHH---CCCCCCCCCHHHeEECCCCCEEEccCCCccccccc
Confidence 86 69999998643 59999999999999999999999 89999999999999999999999999999876533
Q ss_pred CCCCCCCCC---CcCC---CCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCC
Q 005226 565 GNNPSSSGG---FMGG---ALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPEL 629 (707)
Q Consensus 565 ~~~~~~~~~---~~~~---~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~ 629 (707)
......... ...+ ...........||+.|+|||++.....++.++|||||||++|||++|..||.
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~ 253 (432)
T 3n9x_A 183 KDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHI 253 (432)
T ss_dssp ----------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTC
T ss_pred ccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccc
Confidence 211000000 0000 0000001345679999999986666789999999999999999998766554
No 194
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=1.2e-39 Score=351.28 Aligned_cols=238 Identities=18% Similarity=0.199 Sum_probs=181.8
Q ss_pred ceecccCeeEEEEEEe-CCCceEEEEEcCCC---chhhHHHHHHHH---HHHHhcCCCceeeeE-------EEEEcCCc-
Q 005226 413 YVLGKSGLGIVYKVVL-GNGIPVAVRRLGEG---GEQRHREFVTEV---QAIAKVKHPNIVKLR-------AYYWAPDE- 477 (707)
Q Consensus 413 ~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~---~~l~~l~H~niv~l~-------~~~~~~~~- 477 (707)
+.||+|+||+||+|.. .+|+.||||++... .....+.|.+|+ +++++++|||||+++ +++..++.
T Consensus 79 ~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~ 158 (377)
T 3byv_A 79 TVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQKK 158 (377)
T ss_dssp EEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEEECTTSC
T ss_pred ceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhhhccCCc
Confidence 4899999999999995 57899999998743 334457899999 556666899999998 77665543
Q ss_pred ----------------ceEEEEeecCCChHHHHhCCCCC--CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCC
Q 005226 478 ----------------KLLISDFISNGNLANALRGRNGQ--PSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKP 539 (707)
Q Consensus 478 ----------------~~lV~e~~~~gsL~~~l~~~~~~--~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~ 539 (707)
.++||||+ +|+|.+++...... ....++|..++.|+.||+.||+|||+ .+|+||||||
T Consensus 159 ~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivHrDikp 234 (377)
T 3byv_A 159 KMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHH---YGLVHTYLRP 234 (377)
T ss_dssp SEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHH---TTEECSCCCG
T ss_pred cccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHh---CCeecCCCCH
Confidence 78999999 68999999754211 11235578999999999999999999 8999999999
Q ss_pred CCeEEcCCCCeEEecccccccccccCCCCCCCCCCcCCCCCCCCccccccCccccCCCCCCCC----------CCCCchh
Q 005226 540 SNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPG----------NRPMQKW 609 (707)
Q Consensus 540 ~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----------~~~~~~~ 609 (707)
+|||++.++.+||+|||+|+..... .....| +.|+|||++... ..++.++
T Consensus 235 ~NIll~~~~~~kL~DFG~a~~~~~~-------------------~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~ 294 (377)
T 3byv_A 235 VDIVLDQRGGVFLTGFEHLVRDGAR-------------------VVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSF 294 (377)
T ss_dssp GGEEECTTCCEEECCGGGCEETTCE-------------------EECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHH
T ss_pred HHEEEcCCCCEEEEechhheecCCc-------------------ccCCCC-cCccChhhhcccccccccccccccCChhh
Confidence 9999999999999999999853311 022345 889999997652 2688999
Q ss_pred hHHHHHHHHHHHHhCCCCCCCCCCCCCccchhHHHHHHhhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCC
Q 005226 610 DVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADP 689 (707)
Q Consensus 610 DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP 689 (707)
|||||||++|||++|+.||.......... ++ .. . .......+.+++.+||+.||
T Consensus 295 DvwSlG~il~elltg~~Pf~~~~~~~~~~------~~---~~-~----------------~~~~~~~~~~li~~~L~~dp 348 (377)
T 3byv_A 295 DAWALGLVIYWIWCADLPITKDAALGGSE------WI---FR-S----------------CKNIPQPVRALLEGFLRYPK 348 (377)
T ss_dssp HHHHHHHHHHHHHHSSCCC------CCSG------GG---GS-S----------------CCCCCHHHHHHHHHHTCSSG
T ss_pred hHHHHHHHHHHHHHCCCCCcccccccchh------hh---hh-h----------------ccCCCHHHHHHHHHHcCCCc
Confidence 99999999999999999996543221100 00 00 0 01112457889999999999
Q ss_pred CCCCChHHHHH
Q 005226 690 EVRPRMKNVSE 700 (707)
Q Consensus 690 ~~RPs~~~v~~ 700 (707)
++||++.++++
T Consensus 349 ~~Rpt~~e~l~ 359 (377)
T 3byv_A 349 EDRLLPLQAME 359 (377)
T ss_dssp GGCCCHHHHHT
T ss_pred hhCCCHHHHhh
Confidence 99999999985
No 195
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=7.2e-38 Score=348.96 Aligned_cols=244 Identities=27% Similarity=0.361 Sum_probs=194.0
Q ss_pred cceecccCeeEEEEEEeC-CCceEEEEEcCCCc--hhhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCcceEEEEeecCC
Q 005226 412 AYVLGKSGLGIVYKVVLG-NGIPVAVRRLGEGG--EQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNG 488 (707)
Q Consensus 412 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~g 488 (707)
.+.||+|+||+||+|... +++.||||++.... ......+.+|++++++++||||+++++++.+.+..++||||+++|
T Consensus 27 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~ 106 (486)
T 3mwu_A 27 VCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGG 106 (486)
T ss_dssp EEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred eEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEEEcCCCC
Confidence 348999999999999975 78999999986432 223477899999999999999999999999999999999999999
Q ss_pred ChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEc---CCCCeEEecccccccccccC
Q 005226 489 NLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLD---NDFQPYISDFGLSRLINITG 565 (707)
Q Consensus 489 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~---~~~~~kl~DfGla~~~~~~~ 565 (707)
+|.+++.... .+++..+..|+.||+.||+|||+ .+|+||||||+|||++ .++.+||+|||+++......
T Consensus 107 ~L~~~~~~~~-----~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~ 178 (486)
T 3mwu_A 107 ELFDEIIKRK-----RFSEHDAARIIKQVFSGITYMHK---HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT 178 (486)
T ss_dssp BHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC-
T ss_pred cHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCchHHEEEecCCCCCCEEEEECCcCeECCCCC
Confidence 9999997543 58999999999999999999999 8999999999999995 45679999999998654221
Q ss_pred CCCCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchhHHHH
Q 005226 566 NNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVRW 645 (707)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~ 645 (707)
.. ....||+.|+|||++.. .++.++||||+||++|||++|+.||..... ..+...
T Consensus 179 ~~-----------------~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~ll~g~~pf~~~~~------~~~~~~ 233 (486)
T 3mwu_A 179 KM-----------------KDRIGTAYYIAPEVLRG--TYDEKCDVWSAGVILYILLSGTPPFYGKNE------YDILKR 233 (486)
T ss_dssp --------------------CCTTGGGGCCGGGGGS--CCCHHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHH
T ss_pred cc-----------------CCCcCCCCCCCHHHhCC--CCCchhhHHHHHHHHHHHHhCCCCCCCCCH------HHHHHH
Confidence 11 22357999999999753 588999999999999999999999965321 222222
Q ss_pred HHhhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 005226 646 VKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSE 700 (707)
Q Consensus 646 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~ 700 (707)
+......... + ........+.+++.+||+.||++|||+.++++
T Consensus 234 i~~~~~~~~~------~------~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~ 276 (486)
T 3mwu_A 234 VETGKYAFDL------P------QWRTISDDAKDLIRKMLTFHPSLRITATQCLE 276 (486)
T ss_dssp HHHTCCCSCS------G------GGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred HHhCCCCCCC------c------ccCCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 2221110000 0 01122345789999999999999999999986
No 196
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=7.9e-38 Score=323.44 Aligned_cols=240 Identities=25% Similarity=0.327 Sum_probs=193.5
Q ss_pred cceecccCeeEEEEEEeC-CCceEEEEEcCCCc---hhhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCcceEEEEeecC
Q 005226 412 AYVLGKSGLGIVYKVVLG-NGIPVAVRRLGEGG---EQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISN 487 (707)
Q Consensus 412 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~ 487 (707)
.+.||+|+||.||+|... ++..||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++||||+++
T Consensus 19 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 98 (284)
T 2vgo_A 19 GRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPR 98 (284)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCTT
T ss_pred eheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEEEeCCC
Confidence 348999999999999975 67889999986542 12236789999999999999999999999999999999999999
Q ss_pred CChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEecccccccccccCCC
Q 005226 488 GNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNN 567 (707)
Q Consensus 488 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~~~ 567 (707)
|+|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++........
T Consensus 99 ~~L~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~- 169 (284)
T 2vgo_A 99 GELYKELQKHG-----RFDEQRSATFMEELADALHYCHE---RKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRR- 169 (284)
T ss_dssp EEHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCSGGGEEECTTCCEEECCCTTCEECSSSCB-
T ss_pred CcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCHHHEEEcCCCCEEEecccccccCccccc-
Confidence 99999997643 58999999999999999999999 8999999999999999999999999999865432110
Q ss_pred CCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchhHHHHHH
Q 005226 568 PSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVRWVK 647 (707)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~ 647 (707)
....|+..|+|||++.. ..++.++||||||+++|||++|+.||..... ......+.
T Consensus 170 -----------------~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~g~~pf~~~~~------~~~~~~~~ 225 (284)
T 2vgo_A 170 -----------------RTMCGTLDYLPPEMIEG-KTHDEKVDLWCAGVLCYEFLVGMPPFDSPSH------TETHRRIV 225 (284)
T ss_dssp -----------------CCCCSCGGGCCHHHHTT-CCBCTTHHHHHHHHHHHHHHHSSCTTCCSSH------HHHHHHHH
T ss_pred -----------------ccccCCCCcCCHHHhcc-CCCCcccchhhHHHHHHHHHHCCCCCCCCCH------hHHHHHHh
Confidence 22346899999999665 6778999999999999999999999964321 11111111
Q ss_pred hhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 005226 648 KGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSE 700 (707)
Q Consensus 648 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~ 700 (707)
.....+. ......+.+++.+|++.||.+||++.++++
T Consensus 226 ---~~~~~~~-------------~~~~~~~~~li~~~l~~~p~~Rps~~~ll~ 262 (284)
T 2vgo_A 226 ---NVDLKFP-------------PFLSDGSKDLISKLLRYHPPQRLPLKGVME 262 (284)
T ss_dssp ---TTCCCCC-------------TTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ---ccccCCC-------------CcCCHHHHHHHHHHhhcCHhhCCCHHHHhh
Confidence 1111111 112245679999999999999999999985
No 197
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=6.8e-39 Score=330.43 Aligned_cols=249 Identities=23% Similarity=0.327 Sum_probs=194.3
Q ss_pred ceecccCeeEEEEEEeC-CCceEEEEEcCCC--chhhHHHHHHHHHHHHhcCCCceeeeEEEEEc--CCcceEEEEeecC
Q 005226 413 YVLGKSGLGIVYKVVLG-NGIPVAVRRLGEG--GEQRHREFVTEVQAIAKVKHPNIVKLRAYYWA--PDEKLLISDFISN 487 (707)
Q Consensus 413 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~--~~~~~lV~e~~~~ 487 (707)
+.||+|+||.||+|... +++.||+|.+... .....+.+.+|++++++++||||+++++++.. .+..++||||+++
T Consensus 12 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~ 91 (279)
T 2w5a_A 12 YTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEG 91 (279)
T ss_dssp EEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEEEEECCTT
T ss_pred hhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEEEEeCCCC
Confidence 47999999999999975 7899999998754 23445779999999999999999999998854 4678999999999
Q ss_pred CChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCC-----ceecCCCCCCeEEcCCCCeEEeccccccccc
Q 005226 488 GNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRK-----FVHGDIKPSNILLDNDFQPYISDFGLSRLIN 562 (707)
Q Consensus 488 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~-----iiHrDlk~~NIll~~~~~~kl~DfGla~~~~ 562 (707)
|+|.+++.... .....+++..++.++.|++.||+|||+ .+ |+||||||+||+++.++.+||+|||+++...
T Consensus 92 ~~L~~~l~~~~-~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~~~~ 167 (279)
T 2w5a_A 92 GDLASVITKGT-KERQYLDEEFVLRVMTQLTLALKECHR---RSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILN 167 (279)
T ss_dssp EEHHHHHHHHH-HTTCCCCHHHHHHHHHHHHHHHHHHHH---HC------CCCCCSGGGEEECSSSCEEECCCCHHHHC-
T ss_pred CCHHHHHHhhc-ccCCCCCHHHHHHHHHHHHHHHHHHhc---ccCCCCeeEEeccchhhEEEcCCCCEEEecCchheeec
Confidence 99999997532 112358999999999999999999999 56 9999999999999999999999999997654
Q ss_pred ccCCCCCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchhH
Q 005226 563 ITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDL 642 (707)
Q Consensus 563 ~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~ 642 (707)
.... ......|+..|+|||.+.. ..++.++||||||+++|||++|+.||.... ...+
T Consensus 168 ~~~~----------------~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~g~~p~~~~~------~~~~ 224 (279)
T 2w5a_A 168 HDTS----------------FAKTFVGTPYYMSPEQMNR-MSYNEKSDIWSLGCLLYELCALMPPFTAFS------QKEL 224 (279)
T ss_dssp --CH----------------HHHHHHSCCTTCCHHHHHC-C-CCHHHHHHHHHHHHHHHHHSSCSSCCSS------HHHH
T ss_pred cccc----------------cccccCCCccccChHHhcc-CCCCchhhHHHHHHHHHHHHHCCCCCcccC------HHHH
Confidence 2110 0012356889999998665 577899999999999999999999986532 1223
Q ss_pred HHHHHhhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHH
Q 005226 643 VRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLE 703 (707)
Q Consensus 643 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~~L~ 703 (707)
.+.+........+ ......+.+++.+||+.||++||++.+|++.+.
T Consensus 225 ~~~i~~~~~~~~~---------------~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~ 270 (279)
T 2w5a_A 225 AGKIREGKFRRIP---------------YRYSDELNEIITRMLNLKDYHRPSVEEILENPL 270 (279)
T ss_dssp HHHHHHTCCCCCC---------------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTT
T ss_pred HHHHhhcccccCC---------------cccCHHHHHHHHHHcCCCcccCCCHHHHHhChh
Confidence 3333222111100 112345789999999999999999999987653
No 198
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=2e-38 Score=332.58 Aligned_cols=259 Identities=32% Similarity=0.571 Sum_probs=209.3
Q ss_pred cCCcccHHHHHHHHhcCcCCCCCCCCCCCCCCCCCce--eceeEeCCCCCCCCCcEEEEEcCCCCccc--cCCCCcCCCC
Q 005226 18 FALSPDGLTLLSLKSAIDQTDTSVFADWNENDPTPCR--WSGISCMNITGFPDPRVVGVAISGKNVRG--YIPSELGSLI 93 (707)
Q Consensus 18 ~~~~~d~~~l~~~k~~~~~~~~~~~~~W~~~~~~~C~--w~gv~c~~~~~~~~~~v~~L~L~~n~l~~--~~~~~l~~l~ 93 (707)
.|.++|..||++||+++. ||. .+++|+.+ .+||. |.||+|...+. ..+|+.|+|++|++.+ .+|..|.+++
T Consensus 2 ~c~~~~~~aL~~~k~~~~-~~~-~l~~W~~~-~~~C~~~w~gv~C~~~~~--~~~l~~L~L~~~~l~~~~~~~~~l~~l~ 76 (313)
T 1ogq_A 2 LCNPQDKQALLQIKKDLG-NPT-TLSSWLPT-TDCCNRTWLGVLCDTDTQ--TYRVNNLDLSGLNLPKPYPIPSSLANLP 76 (313)
T ss_dssp CSCHHHHHHHHHHHHHTT-CCG-GGTTCCTT-SCTTTTCSTTEEECCSSS--CCCEEEEEEECCCCSSCEECCGGGGGCT
T ss_pred CCCHHHHHHHHHHHHhcC-Ccc-cccCCCCC-CCCCcCCCcceEeCCCCC--CceEEEEECCCCCccCCcccChhHhCCC
Confidence 467889999999999996 665 78999864 36787 99999975331 2689999999999998 8899999999
Q ss_pred CCCEEEccc-CCcCCCCCccccCCCCCceEEecCccCCCCCCcccCCCCCccEEeccCCcccccCCCCCcccchhhhhhh
Q 005226 94 YLRRLNLHN-NNLFGSLPDQLFNATSLHSIFLYGNNLSGSLPPSVCNLPRLQNLDLSNNSFSGSLPDGLKNCKQLQRLIL 172 (707)
Q Consensus 94 ~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 172 (707)
+|++|+|++ |.+++.+|..|.++++|++|+|++|+|++.+|..|.++++|++|+|++|++++.+|..|.++++|++|+|
T Consensus 77 ~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 156 (313)
T 1ogq_A 77 YLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITF 156 (313)
T ss_dssp TCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEEC
T ss_pred CCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEEC
Confidence 999999994 9999888988989999999999999888888888888888888888888888888888888888888888
Q ss_pred cCCcccccCCCcccccCC-CccEEeccCCCCCCCCCcc------------------------------------------
Q 005226 173 ARNKFSGQIPAGIWPELE-NLVQLDLSDNDFKGPIPND------------------------------------------ 209 (707)
Q Consensus 173 ~~N~l~~~lp~~~~~~l~-~L~~L~ls~N~l~~~~p~~------------------------------------------ 209 (707)
++|+|+|.+|..+ ..++ +|++|+|++|++++.+|..
T Consensus 157 ~~N~l~~~~p~~l-~~l~~~L~~L~L~~N~l~~~~~~~~~~l~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 235 (313)
T 1ogq_A 157 DGNRISGAIPDSY-GSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAF 235 (313)
T ss_dssp CSSCCEEECCGGG-GCCCTTCCEEECCSSEEEEECCGGGGGCCCSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECC
T ss_pred cCCcccCcCCHHH-hhhhhcCcEEECcCCeeeccCChHHhCCcccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceee
Confidence 8888876666554 2343 5555555554444333222
Q ss_pred ----hhhhhccccEEEeccCcCcCCCCCcCCCCCCccEEEccCCcCcccCCCCCCCCCCCCcccCCCCcccCCCCCCCC
Q 005226 210 ----LGELQSLSATLNLSYNHLSGKIPKSLGNLPVTVSFDLRGNNLSGEIPQTGSFANQGPTAFLSNPLLCGFPLQKSC 284 (707)
Q Consensus 210 ----~~~l~~L~~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~~~~~~~~~~~~N~~l~~~~~~~~c 284 (707)
+..+++| ++|+|++|+|++.+|..+..+++|+.|++++|+++|.+|....+.++..+.+.+|+++||.|+. .|
T Consensus 236 ~~~~~~~l~~L-~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~~~l~~L~~l~l~~N~~lc~~p~~-~C 312 (313)
T 1ogq_A 236 DLGKVGLSKNL-NGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLCGSPLP-AC 312 (313)
T ss_dssp BGGGCCCCTTC-CEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCSTTGGGSCGGGTCSSSEEESTTSS-CC
T ss_pred ecCcccccCCC-CEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCCccccccChHHhcCCCCccCCCCC-CC
Confidence 3344566 6778888888888898999999999999999999999999888899999999999999998876 46
No 199
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=9.7e-38 Score=338.66 Aligned_cols=261 Identities=18% Similarity=0.212 Sum_probs=194.4
Q ss_pred cceecccCeeEEEEEEe-CCCceEEEEEcCCCchhhHHHHHHHHHHHHhcC--------CCceeeeEEEEE----cCCcc
Q 005226 412 AYVLGKSGLGIVYKVVL-GNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVK--------HPNIVKLRAYYW----APDEK 478 (707)
Q Consensus 412 ~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~--------H~niv~l~~~~~----~~~~~ 478 (707)
.+.||+|+||+||+|.. .+++.||||++..... ..+.+.+|++++++++ |+||+++++++. .....
T Consensus 42 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~~~~~~ 120 (397)
T 1wak_A 42 IRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEH-YTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHI 120 (397)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECSCHH-HHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEETTEEEE
T ss_pred EEEeeecCCeeEEEEEecCCCeEEEEEEEecCCc-chHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCCCCceE
Confidence 34799999999999985 4688999999976533 3477899999999996 788999999997 45678
Q ss_pred eEEEEeecCCChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCC-CceecCCCCCCeEEcCCC---------
Q 005226 479 LLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPR-KFVHGDIKPSNILLDNDF--------- 548 (707)
Q Consensus 479 ~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~-~iiHrDlk~~NIll~~~~--------- 548 (707)
++||||+ +|+|.+++.... ...+++..+..|+.||+.||+|||+ + +|+||||||+|||++.++
T Consensus 121 ~lv~e~~-~~~l~~~~~~~~---~~~~~~~~~~~i~~qi~~aL~~lH~---~~givHrDikp~NIll~~~~~~~~~~~~~ 193 (397)
T 1wak_A 121 CMVFEVL-GHHLLKWIIKSN---YQGLPLPCVKKIIQQVLQGLDYLHT---KCRIIHTDIKPENILLSVNEQYIRRLAAE 193 (397)
T ss_dssp EEEECCC-CCBHHHHHHHTT---TSCCCHHHHHHHHHHHHHHHHHHHH---TTCEECCCCSGGGEEECCCHHHHHHHHHH
T ss_pred EEEEecc-CccHHHHHHhcc---cCCCCHHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHeeEeccchhhhhhhhh
Confidence 9999999 667777775442 2359999999999999999999999 7 999999999999999775
Q ss_pred ----------------------------------------CeEEecccccccccccCCCCCCCCCCcCCCCCCCCccccc
Q 005226 549 ----------------------------------------QPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTE 588 (707)
Q Consensus 549 ----------------------------------------~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 588 (707)
.+||+|||+++...... ....
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~~-------------------~~~~ 254 (397)
T 1wak_A 194 ATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHF-------------------TEDI 254 (397)
T ss_dssp HC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBCS-------------------CSCC
T ss_pred hHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccccC-------------------ccCC
Confidence 79999999998654221 2235
Q ss_pred cCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchhHHHHHHhhccccC--------------
Q 005226 589 KTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVRWVKKGFEEEN-------------- 654 (707)
Q Consensus 589 gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------- 654 (707)
||..|+|||++.. ..++.++|||||||++|||+||+.||............+....+........
T Consensus 255 gt~~y~aPE~~~~-~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 333 (397)
T 1wak_A 255 QTRQYRSLEVLIG-SGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFF 333 (397)
T ss_dssp SCGGGCCHHHHHT-SCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTB
T ss_pred CCCcccCChhhcC-CCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhccccccccc
Confidence 6999999999765 6688999999999999999999999976544321111111111111111000
Q ss_pred ----CC--------chhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 005226 655 ----PL--------SDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSE 700 (707)
Q Consensus 655 ----~~--------~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~ 700 (707)
.. ....+...............+.+|+.+||+.||++|||++|+++
T Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 391 (397)
T 1wak_A 334 TKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLR 391 (397)
T ss_dssp CTTSSBSSCCCCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred CCccccccccccCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence 00 00000001111123455678899999999999999999999985
No 200
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=1.4e-37 Score=343.86 Aligned_cols=259 Identities=20% Similarity=0.275 Sum_probs=199.2
Q ss_pred ceecccCeeEEEEEEe-CCCceEEEEEcCCCchhhHHHHHHHHHHHHhcCC-CceeeeEEEEEcCCcceEEEEeecCCCh
Q 005226 413 YVLGKSGLGIVYKVVL-GNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKH-PNIVKLRAYYWAPDEKLLISDFISNGNL 490 (707)
Q Consensus 413 ~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H-~niv~l~~~~~~~~~~~lV~e~~~~gsL 490 (707)
+.||+|+||.||+|.. .+++.||||++...... .++.+|+++++.++| +++..+..++...+..++||||+ +++|
T Consensus 13 ~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~--~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~~-g~sL 89 (483)
T 3sv0_A 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH--PQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDLL-GPSL 89 (483)
T ss_dssp CCCEECSSCEEEEEEETTTCCEEEEEEEETTCSS--CCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEECC-CCBH
T ss_pred EEEeeCCCEEEEEEEECCCCcEEEEEEecccccc--HHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEECC-CCCH
Confidence 4799999999999996 57899999987654332 457899999999976 56666667777788889999999 9999
Q ss_pred HHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEE---cCCCCeEEecccccccccccCCC
Q 005226 491 ANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILL---DNDFQPYISDFGLSRLINITGNN 567 (707)
Q Consensus 491 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll---~~~~~~kl~DfGla~~~~~~~~~ 567 (707)
.+++.... ..+++..++.|+.||+.||+|||+ ++||||||||+|||+ +.++.+||+|||+++........
T Consensus 90 ~~ll~~~~----~~l~~~~~~~i~~qi~~aL~yLH~---~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~ 162 (483)
T 3sv0_A 90 EDLFNFCS----RKLSLKTVLMLADQMINRVEFVHS---KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTH 162 (483)
T ss_dssp HHHHHHTT----TCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTC
T ss_pred HHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccCcceEEEecCCCCCeEEEEeCCcceeccCCccc
Confidence 99998543 259999999999999999999999 899999999999999 68899999999999876543221
Q ss_pred CCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchhHHHHHH
Q 005226 568 PSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVRWVK 647 (707)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~ 647 (707)
. ...+.......||..|+|||++.. ..++.++|||||||++|||++|+.||....... .......+.
T Consensus 163 ~---------~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~---~~~~~~~i~ 229 (483)
T 3sv0_A 163 Q---------HIPYRENKNLTGTARYASVNTHLG-IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGT---KKQKYEKIS 229 (483)
T ss_dssp C---------BCCCCCCCCCCSCTTTCCHHHHTT-CCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSS---HHHHHHHHH
T ss_pred c---------ccccccccccCCCccccCHHHhcC-CCCChHHHHHHHHHHHHHHHhCCCCCccccchh---HHHHHHHHh
Confidence 1 112223345678999999999765 678999999999999999999999997644321 111111111
Q ss_pred hhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHHhh
Q 005226 648 KGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERI 705 (707)
Q Consensus 648 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~~L~~i 705 (707)
..... ..++. + ......++.+++..||+.||++||++.+|++.|+++
T Consensus 230 ~~~~~-----~~~~~-l-----~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l 276 (483)
T 3sv0_A 230 EKKVA-----TSIEA-L-----CRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDL 276 (483)
T ss_dssp HHHHH-----SCHHH-H-----HTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHH
T ss_pred hcccc-----ccHHH-H-----hcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHH
Confidence 10000 00000 0 012235788999999999999999999999999876
No 201
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=8.5e-39 Score=336.41 Aligned_cols=254 Identities=22% Similarity=0.305 Sum_probs=192.6
Q ss_pred cceecccCeeEEEEEEeCCCceEEEEEcCCCc--hhhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCcceEEEEeecCCC
Q 005226 412 AYVLGKSGLGIVYKVVLGNGIPVAVRRLGEGG--EQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGN 489 (707)
Q Consensus 412 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gs 489 (707)
.+.||+|+||.||+|...+ .+|+|+++... ....+.|.+|+.++++++||||+++++++.+.+..++||||+++++
T Consensus 38 ~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~e~~~~~~ 115 (319)
T 2y4i_B 38 GELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRT 115 (319)
T ss_dssp CCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEECBCCCSEE
T ss_pred eeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEeecccCCc
Confidence 3589999999999999754 58999987542 2233567889999999999999999999999999999999999999
Q ss_pred hHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEecccccccccccCCCCC
Q 005226 490 LANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPS 569 (707)
Q Consensus 490 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~ 569 (707)
|.+++.... ..+++..+..++.||+.||+|||+ .+|+||||||+||+++ ++.+||+|||+++..........
T Consensus 116 L~~~l~~~~----~~~~~~~~~~i~~qi~~al~~lH~---~~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~~~~ 187 (319)
T 2y4i_B 116 LYSVVRDAK----IVLDVNKTRQIAQEIVKGMGYLHA---KGILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGRR 187 (319)
T ss_dssp HHHHTTSSC----CCCCSHHHHHHHHHHHHHHHHHHH---TTCCCCCCCSTTEEEC---CCEECCCSCCC----------
T ss_pred HHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHh---CCccccCCChhhEEEe-CCCEEEeecCCcccccccccccc
Confidence 999997643 358999999999999999999999 8999999999999998 67999999999876532211100
Q ss_pred CCCCCcCCCCCCCCccccccCccccCCCCCCC--------CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchh
Q 005226 570 SSGGFMGGALPYMKPVQTEKTNNYRAPEARVP--------GNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPD 641 (707)
Q Consensus 570 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~ 641 (707)
........|+..|+|||++.. ...++.++||||||+++|||++|+.||..... ..
T Consensus 188 -----------~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~------~~ 250 (319)
T 2y4i_B 188 -----------EDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPA------EA 250 (319)
T ss_dssp -----------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCH------HH
T ss_pred -----------ccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCH------HH
Confidence 001123457899999998653 24578899999999999999999999964321 12
Q ss_pred HHHHHHhhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHHhhc
Q 005226 642 LVRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERIG 706 (707)
Q Consensus 642 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~~L~~i~ 706 (707)
....+......... . ......+.+++.+||+.||++||++.+++++|+++.
T Consensus 251 ~~~~~~~~~~~~~~-----~---------~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~ 301 (319)
T 2y4i_B 251 IIWQMGTGMKPNLS-----Q---------IGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLP 301 (319)
T ss_dssp HHHHHHTTCCCCCC-----C---------SSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC-
T ss_pred HHHHhccCCCCCCC-----c---------CCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHH
Confidence 22222222111100 0 011234679999999999999999999999999874
No 202
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=1.3e-37 Score=333.92 Aligned_cols=259 Identities=20% Similarity=0.313 Sum_probs=194.9
Q ss_pred ceecccCeeEEEEEEeC-CCceEEEEEcCCCc-hhhHHHHHHHHHHHHhcCCCceeeeEEEEEcC-----CcceEEEEee
Q 005226 413 YVLGKSGLGIVYKVVLG-NGIPVAVRRLGEGG-EQRHREFVTEVQAIAKVKHPNIVKLRAYYWAP-----DEKLLISDFI 485 (707)
Q Consensus 413 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~-----~~~~lV~e~~ 485 (707)
+.||+|+||.||+|... ++..||||++.... ....+.+.+|++++++++||||+++++++... ...++||||+
T Consensus 33 ~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~iv~e~~ 112 (364)
T 3qyz_A 33 SYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM 112 (364)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEEEEEECC
T ss_pred EEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceEEEEEccc
Confidence 48999999999999964 78899999997543 33347789999999999999999999999765 3578999999
Q ss_pred cCCChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEecccccccccccC
Q 005226 486 SNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITG 565 (707)
Q Consensus 486 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~ 565 (707)
. |+|.+++... .+++..+..|+.||+.||+|||+ .+|+||||||+||+++.++.+||+|||+++......
T Consensus 113 ~-~~L~~~l~~~------~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~ 182 (364)
T 3qyz_A 113 E-TDLYKLLKTQ------HLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH 182 (364)
T ss_dssp S-EEHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEECCGGG
T ss_pred C-cCHHHHHHhC------CCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCChHhEEECCCCCEEEEeCcceEecCCCC
Confidence 7 5999999754 49999999999999999999999 899999999999999999999999999998765332
Q ss_pred CCCCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchhHHHH
Q 005226 566 NNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVRW 645 (707)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~ 645 (707)
..... .....||+.|+|||++..+..++.++|||||||++|||++|+.||...... +....
T Consensus 183 ~~~~~-------------~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~------~~~~~ 243 (364)
T 3qyz_A 183 DHTGF-------------LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL------DQLNH 243 (364)
T ss_dssp CBCCT-------------TCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGG------GHHHH
T ss_pred Ccccc-------------ccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChH------HHHHH
Confidence 21110 123457999999998766566899999999999999999999999754321 22222
Q ss_pred HHhhccccCC--CchhchHHHHh---h----------hhhHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 005226 646 VKKGFEEENP--LSDMVDAMLLQ---E----------VHAKKEVIAVFHLALACTEADPEVRPRMKNVSE 700 (707)
Q Consensus 646 ~~~~~~~~~~--~~~~~d~~l~~---~----------~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~ 700 (707)
+......... .....+..... . .........+.+++.+|++.||++|||+.|+++
T Consensus 244 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 313 (364)
T 3qyz_A 244 ILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 313 (364)
T ss_dssp HHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHHHhCCCCHHHHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 2111111000 00000000000 0 000112356789999999999999999999975
No 203
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=4.1e-38 Score=328.52 Aligned_cols=246 Identities=22% Similarity=0.344 Sum_probs=190.9
Q ss_pred ceecccCeeEEEEEEeC-CCceEEEEEcCCCchhhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCcceEEEEeecCCChH
Q 005226 413 YVLGKSGLGIVYKVVLG-NGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLA 491 (707)
Q Consensus 413 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL~ 491 (707)
+.||+|+||.||+|... ++..||+|++........+.+.+|++++++++||||+++++++..++..++||||+++|+|.
T Consensus 25 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~ 104 (302)
T 2j7t_A 25 GELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVD 104 (302)
T ss_dssp EEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEECCTTEEHH
T ss_pred ceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEeCCCCcHH
Confidence 47999999999999975 58899999987765555688999999999999999999999999999999999999999999
Q ss_pred HHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEecccccccccccCCCCCCC
Q 005226 492 NALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSS 571 (707)
Q Consensus 492 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~ 571 (707)
+++.... ..+++..+..++.||+.||+|||+ .+|+||||||+||+++.++.+||+|||++..........
T Consensus 105 ~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~--- 174 (302)
T 2j7t_A 105 AIMLELD----RGLTEPQIQVVCRQMLEALNFLHS---KRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKR--- 174 (302)
T ss_dssp HHHHHHT----SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHHHC----
T ss_pred HHHHhhc----cCCCHHHHHHHHHHHHHHHHHHhc---CCcccCCCCHHHEEECCCCCEEEEECCCCcccccccccc---
Confidence 9987532 358999999999999999999999 899999999999999999999999999986443211100
Q ss_pred CCCcCCCCCCCCccccccCccccCCCCCC----CCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchhHHHHHH
Q 005226 572 GGFMGGALPYMKPVQTEKTNNYRAPEARV----PGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVRWVK 647 (707)
Q Consensus 572 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~----~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~ 647 (707)
....|+..|+|||++. .+..++.++||||||+++|||++|+.||..... ........
T Consensus 175 -------------~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~------~~~~~~~~ 235 (302)
T 2j7t_A 175 -------------DSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNP------MRVLLKIA 235 (302)
T ss_dssp -----------------CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCH------HHHHHHHH
T ss_pred -------------ccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCH------HHHHHHHh
Confidence 1234688999999863 346778999999999999999999999864321 11111111
Q ss_pred hhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 005226 648 KGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSE 700 (707)
Q Consensus 648 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~ 700 (707)
. ...+ ... ........+.+++.+||+.||++|||+.++++
T Consensus 236 ~---~~~~--~~~--------~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 275 (302)
T 2j7t_A 236 K---SDPP--TLL--------TPSKWSVEFRDFLKIALDKNPETRPSAAQLLE 275 (302)
T ss_dssp H---SCCC--CCS--------SGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred c---cCCc--ccC--------CccccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 1 1110 000 01112345789999999999999999999875
No 204
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=8e-38 Score=349.20 Aligned_cols=244 Identities=26% Similarity=0.340 Sum_probs=190.6
Q ss_pred cceecccCeeEEEEEEeC-CCceEEEEEcCCCc--hhhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCcceEEEEeecCC
Q 005226 412 AYVLGKSGLGIVYKVVLG-NGIPVAVRRLGEGG--EQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNG 488 (707)
Q Consensus 412 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~g 488 (707)
.+.||+|+||+||+|... ++..||+|++.... ......+.+|+.++++++||||+++++++.+.+..++||||+++|
T Consensus 42 ~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~g 121 (494)
T 3lij_A 42 VKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGG 121 (494)
T ss_dssp EEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCCSC
T ss_pred eeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCCCC
Confidence 458999999999999975 78899999987543 223477899999999999999999999999999999999999999
Q ss_pred ChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCC---CCeEEecccccccccccC
Q 005226 489 NLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDND---FQPYISDFGLSRLINITG 565 (707)
Q Consensus 489 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~---~~~kl~DfGla~~~~~~~ 565 (707)
+|.+++.... .+++..+..|+.||+.||+|||+ .+|+||||||+|||++.. +.+||+|||+++......
T Consensus 122 ~L~~~~~~~~-----~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~~ 193 (494)
T 3lij_A 122 ELFDEIIHRM-----KFNEVDAAVIIKQVLSGVTYLHK---HNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQK 193 (494)
T ss_dssp BHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTTB
T ss_pred cHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHH---CCceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCCc
Confidence 9999987543 58999999999999999999999 899999999999999764 559999999998765321
Q ss_pred CCCCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchhHHHH
Q 005226 566 NNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVRW 645 (707)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~ 645 (707)
.. ....||+.|+|||++. ..++.++||||+||++|||++|+.||..... ..+...
T Consensus 194 ~~-----------------~~~~gt~~y~aPE~l~--~~~~~~~DiwslG~il~~ll~g~~pf~~~~~------~~~~~~ 248 (494)
T 3lij_A 194 KM-----------------KERLGTAYYIAPEVLR--KKYDEKCDVWSIGVILFILLAGYPPFGGQTD------QEILRK 248 (494)
T ss_dssp CB-----------------CCCCSCTTTCCHHHHT--TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHH
T ss_pred cc-----------------cccCCCcCeeCHHHHc--ccCCCchhHHHHHHHHHHHHhCCCCCCCCCH------HHHHHH
Confidence 11 2245799999999864 4688999999999999999999999965321 222222
Q ss_pred HHhhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 005226 646 VKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSE 700 (707)
Q Consensus 646 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~ 700 (707)
+......... + ........+.+++.+||+.||++|||+.++++
T Consensus 249 i~~~~~~~~~------~------~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~ 291 (494)
T 3lij_A 249 VEKGKYTFDS------P------EWKNVSEGAKDLIKQMLQFDSQRRISAQQALE 291 (494)
T ss_dssp HHHTCCCCCS------G------GGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHhCCCCCCc------h------hcccCCHHHHHHHHHHCCCChhhCccHHHHhc
Confidence 2221111000 0 00122345789999999999999999999875
No 205
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=7.7e-38 Score=342.57 Aligned_cols=191 Identities=25% Similarity=0.313 Sum_probs=163.8
Q ss_pred ceecccCeeEEEEEEeC-CCceEEEEEcCCCchhhHHHHHHHHHHHHhc------CCCceeeeEEEEEcCCcceEEEEee
Q 005226 413 YVLGKSGLGIVYKVVLG-NGIPVAVRRLGEGGEQRHREFVTEVQAIAKV------KHPNIVKLRAYYWAPDEKLLISDFI 485 (707)
Q Consensus 413 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l------~H~niv~l~~~~~~~~~~~lV~e~~ 485 (707)
+.||+|+||+||+|... +++.||||++..... ..+.+.+|+++++.+ +|+||+++++++...+..++||||+
T Consensus 103 ~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~ 181 (429)
T 3kvw_A 103 KVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKR-FHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELL 181 (429)
T ss_dssp EEEEESSSEEEEEEEETTTTEEEEEEEECSCHH-HHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEEEEEECCC
T ss_pred EEcccCccEEEEEEEECCCCcEEEEEEECCccc-hHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeEEEEEecc
Confidence 48999999999999865 589999999976433 336778899998887 5679999999999999999999999
Q ss_pred cCCChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCC--eEEecccccccccc
Q 005226 486 SNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQ--PYISDFGLSRLINI 563 (707)
Q Consensus 486 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~--~kl~DfGla~~~~~ 563 (707)
. |+|.+++.... ...+++..+..|+.||+.||+|||+ .+|+||||||+|||++.++. +||+|||+|+....
T Consensus 182 ~-~~L~~~l~~~~---~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~~~~ 254 (429)
T 3kvw_A 182 S-MNLYELIKKNK---FQGFSLPLVRKFAHSILQCLDALHK---NRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQ 254 (429)
T ss_dssp C-CBHHHHHHHTT---TCCCCHHHHHHHHHHHHHHHHHHHH---HTEECSCCSGGGEEESSTTSCCEEECCCTTCEETTC
T ss_pred C-CCHHHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEEccCCCcceEEeecccceecCC
Confidence 6 69999998654 2359999999999999999999999 79999999999999999987 99999999975432
Q ss_pred cCCCCCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Q 005226 564 TGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSP 631 (707)
Q Consensus 564 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~ 631 (707)
.. ....||+.|+|||++.. ..++.++|||||||++|||+||++||...
T Consensus 255 ~~-------------------~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltG~~pf~~~ 302 (429)
T 3kvw_A 255 RV-------------------YTYIQSRFYRAPEVILG-ARYGMPIDMWSLGCILAELLTGYPLLPGE 302 (429)
T ss_dssp CC-------------------CSSCSCGGGCCHHHHHT-BCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred cc-------------------cccCCCCCccChHHHhC-CCCCchHHHHhHHHHHHHHHhCCCCCCCC
Confidence 11 22356899999999765 67899999999999999999999999754
No 206
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=4.5e-38 Score=350.62 Aligned_cols=244 Identities=28% Similarity=0.373 Sum_probs=196.6
Q ss_pred cceecccCeeEEEEEEeC-CCceEEEEEcCCCc---hhhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCcceEEEEeecC
Q 005226 412 AYVLGKSGLGIVYKVVLG-NGIPVAVRRLGEGG---EQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISN 487 (707)
Q Consensus 412 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~ 487 (707)
.+.||+|+||.||+|... +++.||||++.... ......+.+|++++++++||||+++++++.+.+..++||||+.+
T Consensus 31 ~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~ 110 (484)
T 3nyv_A 31 QRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTG 110 (484)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred eeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEecCCC
Confidence 458999999999999975 78999999986542 23457799999999999999999999999999999999999999
Q ss_pred CChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEE---cCCCCeEEeccccccccccc
Q 005226 488 GNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILL---DNDFQPYISDFGLSRLINIT 564 (707)
Q Consensus 488 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll---~~~~~~kl~DfGla~~~~~~ 564 (707)
|+|.+++.... .+++..+..|+.||+.||+|||+ ++|+||||||+||++ +.++.+||+|||+++.....
T Consensus 111 ~~L~~~~~~~~-----~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~ 182 (484)
T 3nyv_A 111 GELFDEIISRK-----RFSEVDAARIIRQVLSGITYMHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS 182 (484)
T ss_dssp CBHHHHHHTCS-----CCBHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCCC
T ss_pred CCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEcccc
Confidence 99999998653 59999999999999999999999 899999999999999 56789999999999866422
Q ss_pred CCCCCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchhHHH
Q 005226 565 GNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVR 644 (707)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~ 644 (707)
.. .....||+.|+|||++.+ .++.++||||+||++|||++|+.||.... ......
T Consensus 183 ~~-----------------~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~ll~g~~pf~~~~------~~~~~~ 237 (484)
T 3nyv_A 183 KK-----------------MKDKIGTAYYIAPEVLHG--TYDEKCDVWSTGVILYILLSGCPPFNGAN------EYDILK 237 (484)
T ss_dssp CS-----------------HHHHTTGGGTCCHHHHHT--CCCTHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHH
T ss_pred cc-----------------cccCCCCccccCceeecC--CCCCcceeHHHHHHHHHHHHCCCCCCCCC------HHHHHH
Confidence 11 123457999999998653 68899999999999999999999997532 122333
Q ss_pred HHHhhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 005226 645 WVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSE 700 (707)
Q Consensus 645 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~ 700 (707)
.+......... + ........+.+++.+||+.||++|||+.++++
T Consensus 238 ~i~~~~~~~~~------~------~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~ 281 (484)
T 3nyv_A 238 KVEKGKYTFEL------P------QWKKVSESAKDLIRKMLTYVPSMRISARDALD 281 (484)
T ss_dssp HHHHCCCCCCS------G------GGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHcCCCCCCC------c------ccccCCHHHHHHHHHHCCCChhHCcCHHHHhh
Confidence 33222111000 0 01122345789999999999999999999975
No 207
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=9e-38 Score=325.45 Aligned_cols=258 Identities=21% Similarity=0.286 Sum_probs=193.7
Q ss_pred ceecccCeeEEEEEEeC-CCceEEEEEcCCCch--hhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCcceEEEEeecCCC
Q 005226 413 YVLGKSGLGIVYKVVLG-NGIPVAVRRLGEGGE--QRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGN 489 (707)
Q Consensus 413 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gs 489 (707)
+.||+|+||.||+|... +++.||||++..... ...+.+.+|++++++++||||+++++++..++..++||||++ |+
T Consensus 9 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~~ 87 (299)
T 2r3i_A 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QD 87 (299)
T ss_dssp EEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCS-EE
T ss_pred hhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEEccc-CC
Confidence 47999999999999975 789999999875432 223678899999999999999999999999999999999997 69
Q ss_pred hHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEecccccccccccCCCCC
Q 005226 490 LANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPS 569 (707)
Q Consensus 490 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~ 569 (707)
|.+++.... ...+++..+..++.||+.||+|||+ .+|+||||||+||+++.++.+||+|||+++.........
T Consensus 88 L~~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~- 160 (299)
T 2r3i_A 88 LKKFMDASA---LTGIPLPLIKSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY- 160 (299)
T ss_dssp HHHHHHHTT---TTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCCSBCT-
T ss_pred HHHHHHhhh---ccCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCCCHHHeEEcCCCCEEECcchhhhhccCCcccc-
Confidence 999997653 2358999999999999999999999 899999999999999999999999999998664221110
Q ss_pred CCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchhHHHHHHhh
Q 005226 570 SSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVRWVKKG 649 (707)
Q Consensus 570 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~ 649 (707)
....+|..|+|||.+.....++.++||||||+++|||+||+.||..... ...+.......
T Consensus 161 ---------------~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~-----~~~~~~~~~~~ 220 (299)
T 2r3i_A 161 ---------------THEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE-----IDQLFRIFRTL 220 (299)
T ss_dssp ---------------TSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSH-----HHHHHHHHHHH
T ss_pred ---------------CcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccH-----HHHHHHHHHHh
Confidence 2234688999999977655578999999999999999999999975321 11111111111
Q ss_pred ccccC--------------CCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 005226 650 FEEEN--------------PLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSE 700 (707)
Q Consensus 650 ~~~~~--------------~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~ 700 (707)
-.... .+.......+.. .......++.+++.+|++.||++|||+.++++
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~ 283 (299)
T 2r3i_A 221 GTPDEVVWPGVTSMPDYKPSFPKWARQDFSK--VVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283 (299)
T ss_dssp CCCCTTTSTTGGGSTTCCTTSCCCCCCCHHH--HSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CCCchhhhhHhhcCcccchhhhcccchhhHh--hCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 00000 000000000000 00112356789999999999999999999986
No 208
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=9.5e-38 Score=328.29 Aligned_cols=259 Identities=20% Similarity=0.290 Sum_probs=187.4
Q ss_pred ceecccCeeEEEEEEeC-CCceEEEEEcCCCchhhHHHHHHHHHHHHhcCCCceeeeEEEEEc--------------CCc
Q 005226 413 YVLGKSGLGIVYKVVLG-NGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWA--------------PDE 477 (707)
Q Consensus 413 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~--------------~~~ 477 (707)
+.||+|+||.||+|... +++.||+|++........+.+.+|++++++++||||+++++++.. .+.
T Consensus 17 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (320)
T 2i6l_A 17 KPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNS 96 (320)
T ss_dssp EECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----CCSCSE
T ss_pred EEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccccccccCc
Confidence 47999999999999976 589999999887666666889999999999999999999998843 356
Q ss_pred ceEEEEeecCCChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEc-CCCCeEEeccc
Q 005226 478 KLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLD-NDFQPYISDFG 556 (707)
Q Consensus 478 ~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~-~~~~~kl~DfG 556 (707)
.++||||++ |+|.+++... .+++..+..++.|++.||+|||+ .+|+||||||+||+++ +++.+||+|||
T Consensus 97 ~~lv~e~~~-~~L~~~~~~~------~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~kl~Dfg 166 (320)
T 2i6l_A 97 VYIVQEYME-TDLANVLEQG------PLLEEHARLFMYQLLRGLKYIHS---ANVLHRDLKPANLFINTEDLVLKIGDFG 166 (320)
T ss_dssp EEEEEECCS-EEHHHHHTTC------CCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSGGGEEEETTTTEEEECCCT
T ss_pred eeEEeeccC-CCHHHHhhcC------CccHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEEcCCCCeEEEccCc
Confidence 789999997 6999999743 48999999999999999999999 8999999999999997 56799999999
Q ss_pred ccccccccCCCCCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCC
Q 005226 557 LSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTS 636 (707)
Q Consensus 557 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~ 636 (707)
+++.......... ......++..|+|||.+.....++.++||||||+++|||++|+.||.....
T Consensus 167 ~~~~~~~~~~~~~-------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~--- 230 (320)
T 2i6l_A 167 LARIMDPHYSHKG-------------HLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHE--- 230 (320)
T ss_dssp TCBCC---------------------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSH---
T ss_pred cccccCCCccccc-------------ccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCH---
Confidence 9987642211110 012345688999999876656789999999999999999999999975321
Q ss_pred ccchhHHHHHHhhccccC---------CCchhchHHHHhhh-----hhHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 005226 637 IEVPDLVRWVKKGFEEEN---------PLSDMVDAMLLQEV-----HAKKEVIAVFHLALACTEADPEVRPRMKNVSE 700 (707)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~---------~~~~~~d~~l~~~~-----~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~ 700 (707)
......+........ .....+........ .......++.+++.+|++.||++|||++++++
T Consensus 231 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (320)
T 2i6l_A 231 ---LEQMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALS 305 (320)
T ss_dssp ---HHHHHHHHHHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred ---HHHHHHHHHhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhC
Confidence 111111111110000 00000000000000 00123456889999999999999999999976
No 209
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=1.6e-38 Score=329.68 Aligned_cols=252 Identities=24% Similarity=0.400 Sum_probs=188.5
Q ss_pred ceecccCeeEEEEEEeC--CC--ceEEEEEcCCC---chhhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCcceEEEEee
Q 005226 413 YVLGKSGLGIVYKVVLG--NG--IPVAVRRLGEG---GEQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFI 485 (707)
Q Consensus 413 ~~lG~G~~g~Vy~~~~~--~~--~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~ 485 (707)
+.||+|+||+||+|.+. ++ ..||||+++.. .....+.+.+|++++++++||||+++++++..+. .++|+||+
T Consensus 24 ~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~v~e~~ 102 (291)
T 1u46_A 24 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MKMVTELA 102 (291)
T ss_dssp EECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-CEEEEECC
T ss_pred eeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-ceeeEecc
Confidence 47999999999999853 23 36899988754 2234578999999999999999999999997654 89999999
Q ss_pred cCCChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEecccccccccccC
Q 005226 486 SNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITG 565 (707)
Q Consensus 486 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~ 565 (707)
++|+|.+++.... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++......
T Consensus 103 ~~~~L~~~l~~~~----~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~ 175 (291)
T 1u46_A 103 PLGSLLDRLRKHQ----GHFLLGTLSRYAVQVAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQND 175 (291)
T ss_dssp TTCBHHHHHHHHG----GGSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEEEETTEEEECCCTTCEECCC-C
T ss_pred cCCCHHHHHHhcc----CCcCHHHHHHHHHHHHHHHHHHHh---CCcccCCCchheEEEcCCCCEEEccccccccccccc
Confidence 9999999997642 358999999999999999999999 899999999999999999999999999998764322
Q ss_pred CCCCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCCCccchhHHH
Q 005226 566 NNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTSIEVPDLVR 644 (707)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~ellt-g~~P~~~~~~~~~~~~~~~~~ 644 (707)
... .......++..|+|||++.. ..++.++||||||+++|||++ |+.||.... ......
T Consensus 176 ~~~-------------~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~~g~~p~~~~~------~~~~~~ 235 (291)
T 1u46_A 176 DHY-------------VMQEHRKVPFAWCAPESLKT-RTFSHASDTWMFGVTLWEMFTYGQEPWIGLN------GSQILH 235 (291)
T ss_dssp CEE-------------EC-----CCGGGCCHHHHHH-CEEEHHHHHHHHHHHHHHHHTTSCCTTTTCC------HHHHHH
T ss_pred cch-------------hhhccCCCCceeeCchhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCcccCC------HHHHHH
Confidence 110 01123345778999998654 567889999999999999999 999986432 122222
Q ss_pred HHHhhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHHhhc
Q 005226 645 WVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERIG 706 (707)
Q Consensus 645 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~~L~~i~ 706 (707)
.+...... .+ ........+.+++.+||+.||++||++.++++.|+++.
T Consensus 236 ~~~~~~~~-~~-------------~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~ 283 (291)
T 1u46_A 236 KIDKEGER-LP-------------RPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQ 283 (291)
T ss_dssp HHHTSCCC-CC-------------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC
T ss_pred HHHccCCC-CC-------------CCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhC
Confidence 22211100 00 00122356789999999999999999999999998863
No 210
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=9.9e-38 Score=328.93 Aligned_cols=246 Identities=24% Similarity=0.308 Sum_probs=189.3
Q ss_pred cceecccCeeEEEEEEeC-CCceEEEEEcCCCch--------hhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCcceEEE
Q 005226 412 AYVLGKSGLGIVYKVVLG-NGIPVAVRRLGEGGE--------QRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLIS 482 (707)
Q Consensus 412 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~ 482 (707)
.+.||+|+||.||+|... +++.||||.+..... .....+.+|++++++++||||+++++++..++ .++||
T Consensus 15 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-~~lv~ 93 (322)
T 2ycf_A 15 SKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED-YYIVL 93 (322)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS-EEEEE
T ss_pred eeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc-eEEEE
Confidence 458999999999999965 678999999865421 12346889999999999999999999987654 89999
Q ss_pred EeecCCChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCC---eEEecccccc
Q 005226 483 DFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQ---PYISDFGLSR 559 (707)
Q Consensus 483 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~---~kl~DfGla~ 559 (707)
||+++|+|.+++.... .+++..+..++.||+.||+|||+ .+|+||||||+||+++.++. +||+|||+++
T Consensus 94 e~~~~~~L~~~~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~ 165 (322)
T 2ycf_A 94 ELMEGGELFDKVVGNK-----RLKEATCKLYFYQMLLAVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK 165 (322)
T ss_dssp ECCTTEETHHHHSTTC-----CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESSSSSSCCEEECCCTTCE
T ss_pred ecCCCCcHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHEEEecCCCCCeEEEccCccce
Confidence 9999999999997543 68999999999999999999999 89999999999999987654 9999999998
Q ss_pred cccccCCCCCCCCCCcCCCCCCCCccccccCccccCCCCCC--CCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCc
Q 005226 560 LINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARV--PGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSI 637 (707)
Q Consensus 560 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~ 637 (707)
....... .....||+.|+|||++. ....++.++|||||||++|||++|+.||......
T Consensus 166 ~~~~~~~-----------------~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--- 225 (322)
T 2ycf_A 166 ILGETSL-----------------MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQ--- 225 (322)
T ss_dssp ECCCCHH-----------------HHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCS---
T ss_pred ecccccc-----------------cccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchH---
Confidence 6542100 02235789999999863 3467789999999999999999999999754322
Q ss_pred cchhHHHHHHhhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 005226 638 EVPDLVRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSE 700 (707)
Q Consensus 638 ~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~ 700 (707)
..+...+...... .. +.. .......+.+++.+||+.||++||++.++++
T Consensus 226 --~~~~~~~~~~~~~------~~-~~~-----~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~ 274 (322)
T 2ycf_A 226 --VSLKDQITSGKYN------FI-PEV-----WAEVSEKALDLVKKLLVVDPKARFTTEEALR 274 (322)
T ss_dssp --SCHHHHHHHTCCC------CC-HHH-----HTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred --HHHHHHHHhCccc------cC-chh-----hhhcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence 1222222221110 00 000 0122356789999999999999999999875
No 211
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=1e-37 Score=333.17 Aligned_cols=266 Identities=22% Similarity=0.264 Sum_probs=193.2
Q ss_pred ceecccCeeEEEEEEeC-CCceEEEEEcCCCc-hhhHHHHHHHHHHHHhcCCCceeeeEEEEEcC-----CcceEEEEee
Q 005226 413 YVLGKSGLGIVYKVVLG-NGIPVAVRRLGEGG-EQRHREFVTEVQAIAKVKHPNIVKLRAYYWAP-----DEKLLISDFI 485 (707)
Q Consensus 413 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~-----~~~~lV~e~~ 485 (707)
+.||+|+||.||+|... +|+.||||++.... ......+.+|++++++++||||+++++++..+ ...++||||+
T Consensus 17 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~e~~ 96 (353)
T 2b9h_A 17 SLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELM 96 (353)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCEEEEECCC
T ss_pred eEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceEEEEEecc
Confidence 47999999999999975 68999999997543 33446788999999999999999999998764 5679999999
Q ss_pred cCCChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEecccccccccccC
Q 005226 486 SNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITG 565 (707)
Q Consensus 486 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~ 565 (707)
. |+|.+++... .+++..+..++.||+.||+|||+ .+|+||||||+||+++.++.+||+|||+++......
T Consensus 97 ~-~~L~~~~~~~------~~~~~~~~~~~~qi~~~L~~LH~---~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~ 166 (353)
T 2b9h_A 97 Q-TDLHRVISTQ------MLSDDHIQYFIYQTLRAVKVLHG---SNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESA 166 (353)
T ss_dssp S-EEHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTCCEEECCCTTCEECC---
T ss_pred C-ccHHHHHhhc------CCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEEcCCCcEEEEeccccccccccc
Confidence 7 6999999753 48999999999999999999999 899999999999999999999999999998765332
Q ss_pred CCCCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchhHHHH
Q 005226 566 NNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVRW 645 (707)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~ 645 (707)
.......+ .........||+.|+|||++..+..++.++|||||||++|||++|+.||..... ......
T Consensus 167 ~~~~~~~~------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~------~~~~~~ 234 (353)
T 2b9h_A 167 ADNSEPTG------QQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDY------RHQLLL 234 (353)
T ss_dssp -------------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH------HHHHHH
T ss_pred ccccCccc------cccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCc------HHHHHH
Confidence 21110000 000012346799999999876557789999999999999999999999975321 111111
Q ss_pred HHhhcccc---CCCchhchHHHHhh-------------hhhHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 005226 646 VKKGFEEE---NPLSDMVDAMLLQE-------------VHAKKEVIAVFHLALACTEADPEVRPRMKNVSE 700 (707)
Q Consensus 646 ~~~~~~~~---~~~~~~~d~~l~~~-------------~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~ 700 (707)
+....... .............. ........++.+++.+||+.||++|||++++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (353)
T 2b9h_A 235 IFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALE 305 (353)
T ss_dssp HHHHHCCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHHHhCCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 11111000 00000000000000 000123356789999999999999999999986
No 212
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=8.7e-39 Score=333.59 Aligned_cols=262 Identities=26% Similarity=0.338 Sum_probs=178.7
Q ss_pred ceecccCeeEEEEEEe-CCCceEEEEEcCCCc-hhhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCcceEEEEeecCCCh
Q 005226 413 YVLGKSGLGIVYKVVL-GNGIPVAVRRLGEGG-EQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNL 490 (707)
Q Consensus 413 ~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL 490 (707)
+.||+|+||.||+|.. .++..||||++.... ....+++.+|++++++++||||+++++++...+..++||||+++|+|
T Consensus 21 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 100 (303)
T 2vwi_A 21 EVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSV 100 (303)
T ss_dssp EECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEEEECCTTCBH
T ss_pred heeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEehhccCCch
Confidence 4899999999999985 478899999987543 23346788999999999999999999999999999999999999999
Q ss_pred HHHHhCC---CCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEecccccccccccCCC
Q 005226 491 ANALRGR---NGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNN 567 (707)
Q Consensus 491 ~~~l~~~---~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~~~ 567 (707)
.+++... .......+++..+..++.||+.||+|||+ .+|+||||||+||+++.++.+||+|||++.........
T Consensus 101 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~ 177 (303)
T 2vwi_A 101 LDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHK---NGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDI 177 (303)
T ss_dssp HHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEECTTCCEEECCCHHHHHCC-----
T ss_pred HHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHh---CCCCCCCCChhhEEEcCCCCEEEEeccchheeccCCCc
Confidence 9999641 11123458999999999999999999999 89999999999999999999999999999866432211
Q ss_pred CCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchhHHHHHH
Q 005226 568 PSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVRWVK 647 (707)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~ 647 (707)
... .......||+.|+|||++.....++.++||||||+++|||++|+.||...... .......
T Consensus 178 ~~~-----------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~------~~~~~~~ 240 (303)
T 2vwi_A 178 TRN-----------KVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPM------KVLMLTL 240 (303)
T ss_dssp ---------------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGG------GHHHHHH
T ss_pred cch-----------hhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchh------hHHHHHh
Confidence 100 00123457899999998654346789999999999999999999999753221 1111111
Q ss_pred hhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 005226 648 KGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSE 700 (707)
Q Consensus 648 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~ 700 (707)
........ ....+.. ........+.+++.+||+.||.+||++.++++
T Consensus 241 ~~~~~~~~-~~~~~~~-----~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 287 (303)
T 2vwi_A 241 QNDPPSLE-TGVQDKE-----MLKKYGKSFRKMISLCLQKDPEKRPTAAELLR 287 (303)
T ss_dssp TSSCCCTT-C-----C-----CCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred ccCCCccc-cccccch-----hhhhhhHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 11000000 0000000 00112346789999999999999999999986
No 213
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=6.2e-38 Score=336.10 Aligned_cols=253 Identities=22% Similarity=0.287 Sum_probs=176.5
Q ss_pred ceecccCeeEEEEEEe-CCCceEEEEEcCCC--chhhHHHHHHHHHHHHhcCCCceeeeEEEEEcC------CcceEEEE
Q 005226 413 YVLGKSGLGIVYKVVL-GNGIPVAVRRLGEG--GEQRHREFVTEVQAIAKVKHPNIVKLRAYYWAP------DEKLLISD 483 (707)
Q Consensus 413 ~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~------~~~~lV~e 483 (707)
+.||+|+||.||+|.. .+|+.||||++... .....+.+.+|++++++++||||+++++++... ...++|+|
T Consensus 35 ~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~~lv~e 114 (367)
T 2fst_X 35 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTH 114 (367)
T ss_dssp EECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCEEEEE
T ss_pred eEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCCeEEEEec
Confidence 4799999999999985 47899999999754 233457788999999999999999999999764 55799999
Q ss_pred eecCCChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEecccccccccc
Q 005226 484 FISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINI 563 (707)
Q Consensus 484 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~ 563 (707)
|+ +++|.+++... .+++..+..++.||+.||+|||+ .+|+||||||+||+++.++.+||+|||+++....
T Consensus 115 ~~-~~~L~~~~~~~------~l~~~~~~~i~~qi~~aL~~LH~---~givH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~ 184 (367)
T 2fst_X 115 LM-GADLNNIVKCQ------KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTAD 184 (367)
T ss_dssp CC-CEECC-----C------CCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECC---------
T ss_pred cc-CCCHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHhhEEECCCCCEEEeeccccccccc
Confidence 99 78999998752 59999999999999999999999 8999999999999999999999999999976432
Q ss_pred cCCCCCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchhHH
Q 005226 564 TGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLV 643 (707)
Q Consensus 564 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~~ 643 (707)
.. ....||..|+|||++.....++.++|||||||++|||++|+.||..... .+..
T Consensus 185 ~~-------------------~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~------~~~l 239 (367)
T 2fst_X 185 EM-------------------TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH------IDQL 239 (367)
T ss_dssp -------------------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSH------HHHH
T ss_pred cC-------------------CCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCH------HHHH
Confidence 10 2235689999999977656789999999999999999999999965321 1111
Q ss_pred HHHHhhccccCC--CchhchHHHH---hh----------hhhHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 005226 644 RWVKKGFEEENP--LSDMVDAMLL---QE----------VHAKKEVIAVFHLALACTEADPEVRPRMKNVSE 700 (707)
Q Consensus 644 ~~~~~~~~~~~~--~~~~~d~~l~---~~----------~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~ 700 (707)
..+......... +..+...... .. .........+.+|+.+|+..||++|||+.++++
T Consensus 240 ~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~ 311 (367)
T 2fst_X 240 KLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 311 (367)
T ss_dssp HHHHHHHCSCCHHHHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHHHHHhCCCCHHHHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhc
Confidence 111111110000 0000000000 00 000112356789999999999999999999975
No 214
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=1.8e-37 Score=323.07 Aligned_cols=245 Identities=24% Similarity=0.318 Sum_probs=194.1
Q ss_pred ceecccCeeEEEEEEeC-CCceEEEEEcCCCc---------hhhHHHHHHHHHHHHhcC-CCceeeeEEEEEcCCcceEE
Q 005226 413 YVLGKSGLGIVYKVVLG-NGIPVAVRRLGEGG---------EQRHREFVTEVQAIAKVK-HPNIVKLRAYYWAPDEKLLI 481 (707)
Q Consensus 413 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---------~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~lV 481 (707)
+.||+|+||.||+|... +++.||||++.... ....+.+.+|++++++++ ||||+++++++..++..++|
T Consensus 23 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~lv 102 (298)
T 1phk_A 23 EILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLV 102 (298)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEE
T ss_pred eeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeeccCCeEEEE
Confidence 47999999999999975 68999999986542 122467889999999995 99999999999999999999
Q ss_pred EEeecCCChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEecccccccc
Q 005226 482 SDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLI 561 (707)
Q Consensus 482 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~ 561 (707)
|||+++|+|.+++.... .+++..+..++.||+.||+|||+ .+|+||||||+||+++.++.+||+|||++...
T Consensus 103 ~e~~~~~~L~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~ 174 (298)
T 1phk_A 103 FDLMKKGELFDYLTEKV-----TLSEKETRKIMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQL 174 (298)
T ss_dssp EECCTTCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred EeccCCCcHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCcceEEEcCCCcEEEecccchhhc
Confidence 99999999999997643 58999999999999999999999 89999999999999999999999999999865
Q ss_pred cccCCCCCCCCCCcCCCCCCCCccccccCccccCCCCCC-----CCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCC
Q 005226 562 NITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARV-----PGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTS 636 (707)
Q Consensus 562 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~ 636 (707)
...... ....++..|+|||++. ....++.++||||||+++|||++|+.||....
T Consensus 175 ~~~~~~-----------------~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~---- 233 (298)
T 1phk_A 175 DPGEKL-----------------REVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRK---- 233 (298)
T ss_dssp CTTCCB-----------------CCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS----
T ss_pred CCCccc-----------------ccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCcc----
Confidence 422111 2234688999999864 23567899999999999999999999986422
Q ss_pred ccchhHHHHHHhhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 005226 637 IEVPDLVRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSE 700 (707)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~ 700 (707)
.......+........ .+ ........+.+++.+||+.||++||++.++++
T Consensus 234 --~~~~~~~~~~~~~~~~------~~------~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 234 --QMLMLRMIMSGNYQFG------SP------EWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp --HHHHHHHHHHTCCCCC------TT------TGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred --HHHHHHHHhcCCcccC------cc------cccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence 1122222211111000 00 00122346789999999999999999999975
No 215
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=8.8e-38 Score=334.92 Aligned_cols=256 Identities=22% Similarity=0.270 Sum_probs=186.7
Q ss_pred ceecccCeeEEEEEEeCCCceEEEEEcCCCch-----------hhHHHHHHHHHHHHhcCCCceeeeEEEEEcCC-----
Q 005226 413 YVLGKSGLGIVYKVVLGNGIPVAVRRLGEGGE-----------QRHREFVTEVQAIAKVKHPNIVKLRAYYWAPD----- 476 (707)
Q Consensus 413 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~-----------~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~----- 476 (707)
+.||+|+||.||+|...+|..||||++..... ...+.+.+|++++++++||||+++++++...+
T Consensus 28 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 107 (362)
T 3pg1_A 28 RFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMH 107 (362)
T ss_dssp EEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEEEECCTTTCC
T ss_pred EEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceeeeEEeccCCCcc
Confidence 48999999999999988899999999854321 12367899999999999999999999996533
Q ss_pred cceEEEEeecCCChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEeccc
Q 005226 477 EKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFG 556 (707)
Q Consensus 477 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfG 556 (707)
..++||||++ |+|.+++.... ..+++..+..++.||+.||+|||+ .+|+||||||+||+++.++.+||+|||
T Consensus 108 ~~~lv~e~~~-~~l~~~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~NIl~~~~~~~kl~Dfg 179 (362)
T 3pg1_A 108 KLYLVTELMR-TDLAQVIHDQR----IVISPQHIQYFMYHILLGLHVLHE---AGVVHRDLHPGNILLADNNDITICDFN 179 (362)
T ss_dssp EEEEEEECCS-EEHHHHHHCTT----SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECCTT
T ss_pred eEEEEEccCC-CCHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHH---CcCEecCCChHHEEEcCCCCEEEEecC
Confidence 4689999997 69999988543 369999999999999999999999 899999999999999999999999999
Q ss_pred ccccccccCCCCCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCC
Q 005226 557 LSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTS 636 (707)
Q Consensus 557 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~ 636 (707)
+++........ ....+|+.|+|||++.....++.++|||||||++|||++|+.||......
T Consensus 180 ~~~~~~~~~~~-----------------~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~-- 240 (362)
T 3pg1_A 180 LAREDTADANK-----------------THYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFY-- 240 (362)
T ss_dssp C--------------------------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH--
T ss_pred ccccccccccc-----------------ceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHH--
Confidence 99754322111 22356889999998776567899999999999999999999999753211
Q ss_pred ccchhHHHHHHhhccccCCCchh---chHHHHh--------------hhhhHHHHHHHHHHHHhccCCCCCCCCChHHHH
Q 005226 637 IEVPDLVRWVKKGFEEENPLSDM---VDAMLLQ--------------EVHAKKEVIAVFHLALACTEADPEVRPRMKNVS 699 (707)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~~~~---~d~~l~~--------------~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~ 699 (707)
.....+......... .+. ....... ..........+.+++.+|++.||++|||+.+++
T Consensus 241 ----~~~~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell 315 (362)
T 3pg1_A 241 ----NQLNKIVEVVGTPKI-EDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQAL 315 (362)
T ss_dssp ----HHHHHHHHHHCCCCH-HHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred ----HHHHHHHHHcCCCCh-HHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHH
Confidence 111111111110000 000 0000000 000012235678999999999999999999998
Q ss_pred H
Q 005226 700 E 700 (707)
Q Consensus 700 ~ 700 (707)
+
T Consensus 316 ~ 316 (362)
T 3pg1_A 316 R 316 (362)
T ss_dssp T
T ss_pred c
Confidence 5
No 216
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=3.2e-37 Score=331.54 Aligned_cols=253 Identities=20% Similarity=0.253 Sum_probs=184.2
Q ss_pred ceecccCeeEEEEEEeC-CCceEEEEEcCCC--chhhHHHHHHHHHHHHhcCCCceeeeEEEEEcCC------cceEEEE
Q 005226 413 YVLGKSGLGIVYKVVLG-NGIPVAVRRLGEG--GEQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPD------EKLLISD 483 (707)
Q Consensus 413 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~------~~~lV~e 483 (707)
+.||+|+||.||+|... ++..||||++... .....+.+.+|+.++++++||||+++++++...+ ..++|||
T Consensus 31 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~lv~e 110 (371)
T 2xrw_A 31 KPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME 110 (371)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCCEEEEEEE
T ss_pred eeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccccceEEEEE
Confidence 47999999999999864 6889999998754 2334567889999999999999999999997765 5699999
Q ss_pred eecCCChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEecccccccccc
Q 005226 484 FISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINI 563 (707)
Q Consensus 484 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~ 563 (707)
|++ |+|.+++.. .+++..+..++.||+.||+|||+ .+|+||||||+||+++.++.+||+|||+++....
T Consensus 111 ~~~-~~l~~~~~~-------~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~ 179 (371)
T 2xrw_A 111 LMD-ANLCQVIQM-------ELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT 179 (371)
T ss_dssp CCS-EEHHHHHHS-------CCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECCCCC------
T ss_pred cCC-CCHHHHHhh-------ccCHHHHHHHHHHHHHHHHHHHH---CCeecccCCHHHEEEcCCCCEEEEEeeccccccc
Confidence 997 589998863 38999999999999999999999 8999999999999999999999999999976542
Q ss_pred cCCCCCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchhHH
Q 005226 564 TGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLV 643 (707)
Q Consensus 564 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~~ 643 (707)
... .....||+.|+|||++.. ..++.++|||||||++|||++|+.||...... +..
T Consensus 180 ~~~-----------------~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~el~~g~~pf~~~~~~------~~~ 235 (371)
T 2xrw_A 180 SFM-----------------MTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMIKGGVLFPGTDHI------DQW 235 (371)
T ss_dssp ---------------------------CTTCCHHHHTT-CCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHH------HHH
T ss_pred ccc-----------------cCCceecCCccCHHHhcC-CCCCchHhHHHHHHHHHHHHhCCCCCCCCCHH------HHH
Confidence 211 022456899999999765 67889999999999999999999999753211 111
Q ss_pred HHHHhhcc-------------------ccCCCch-hchHHHHh------hhhhHHHHHHHHHHHHhccCCCCCCCCChHH
Q 005226 644 RWVKKGFE-------------------EENPLSD-MVDAMLLQ------EVHAKKEVIAVFHLALACTEADPEVRPRMKN 697 (707)
Q Consensus 644 ~~~~~~~~-------------------~~~~~~~-~~d~~l~~------~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~ 697 (707)
..+..... ....+.. .++..+.. ..........+.+++.+|+..||++|||++|
T Consensus 236 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e 315 (371)
T 2xrw_A 236 NKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDE 315 (371)
T ss_dssp HHHHC-CCCCCHHHHTTSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHH
T ss_pred HHHHHHhCCCCHHHHHHhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHH
Confidence 11110000 0000000 00000000 0001223567899999999999999999999
Q ss_pred HHH
Q 005226 698 VSE 700 (707)
Q Consensus 698 v~~ 700 (707)
+++
T Consensus 316 ~l~ 318 (371)
T 2xrw_A 316 ALQ 318 (371)
T ss_dssp HHH
T ss_pred HhC
Confidence 986
No 217
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=1.8e-37 Score=347.34 Aligned_cols=243 Identities=27% Similarity=0.334 Sum_probs=191.4
Q ss_pred ceecccCeeEEEEEEeC-CCceEEEEEcCCCch-------------hhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCcc
Q 005226 413 YVLGKSGLGIVYKVVLG-NGIPVAVRRLGEGGE-------------QRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEK 478 (707)
Q Consensus 413 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-------------~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~ 478 (707)
+.||+|+||+||+|... ++..||+|++..... ...+.+.+|++++++++||||+++++++.+.+..
T Consensus 42 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~ 121 (504)
T 3q5i_A 42 RKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYF 121 (504)
T ss_dssp EEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEE
T ss_pred eEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEE
Confidence 48999999999999975 678999999865421 2246789999999999999999999999999999
Q ss_pred eEEEEeecCCChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCC---CeEEecc
Q 005226 479 LLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDF---QPYISDF 555 (707)
Q Consensus 479 ~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~---~~kl~Df 555 (707)
++||||+++|+|.+++.... .+++..+..|+.||+.||+|||+ .+|+||||||+||+++.++ .+||+||
T Consensus 122 ~lv~e~~~gg~L~~~l~~~~-----~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~kl~Df 193 (504)
T 3q5i_A 122 YLVTEFYEGGELFEQIINRH-----KFDECDAANIMKQILSGICYLHK---HNIVHRDIKPENILLENKNSLLNIKIVDF 193 (504)
T ss_dssp EEEEECCTTCBHHHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESSTTCCSSEEECCC
T ss_pred EEEEecCCCCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCcHHHEEEecCCCCccEEEEEC
Confidence 99999999999999997643 59999999999999999999999 8999999999999998776 6999999
Q ss_pred cccccccccCCCCCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCC
Q 005226 556 GLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTST 635 (707)
Q Consensus 556 Gla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~ 635 (707)
|+++........ ....||+.|+|||++. ..++.++||||+||++|+|++|+.||.....
T Consensus 194 g~a~~~~~~~~~-----------------~~~~gt~~y~aPE~~~--~~~~~~~DiwslG~il~~ll~g~~pf~~~~~-- 252 (504)
T 3q5i_A 194 GLSSFFSKDYKL-----------------RDRLGTAYYIAPEVLK--KKYNEKCDVWSCGVIMYILLCGYPPFGGQND-- 252 (504)
T ss_dssp TTCEECCTTSCB-----------------CCCCSCTTTCCHHHHT--TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--
T ss_pred CCCEEcCCCCcc-----------------ccccCCcCCCCHHHhc--cCCCchHHHHHHHHHHHHHHhCCCCCCCCCH--
Confidence 999866432111 2245799999999865 4688999999999999999999999975321
Q ss_pred CccchhHHHHHHhhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 005226 636 SIEVPDLVRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSE 700 (707)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~ 700 (707)
..+...+... ... .+.. ........+.+++.+|++.||.+|||++|+++
T Consensus 253 ----~~~~~~i~~~---~~~----~~~~-----~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~ 301 (504)
T 3q5i_A 253 ----QDIIKKVEKG---KYY----FDFN-----DWKNISDEAKELIKLMLTYDYNKRCTAEEALN 301 (504)
T ss_dssp ----HHHHHHHHHC---CCC----CCHH-----HHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ----HHHHHHHHcC---CCC----CCcc-----ccCCCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 2222222221 100 0000 00112356789999999999999999999875
No 218
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=7.2e-38 Score=332.59 Aligned_cols=247 Identities=22% Similarity=0.315 Sum_probs=189.6
Q ss_pred ceecccCeeEEEEEEe-CCCceEEEEEcCCCc-hhhHHHHHHHHHH-HHhcCCCceeeeEEEEEcCCcceEEEEeecCCC
Q 005226 413 YVLGKSGLGIVYKVVL-GNGIPVAVRRLGEGG-EQRHREFVTEVQA-IAKVKHPNIVKLRAYYWAPDEKLLISDFISNGN 489 (707)
Q Consensus 413 ~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~-l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gs 489 (707)
+.||+|+||.||+|.. .+|+.||||++.... .....++..|+.+ ++.++||||+++++++..++..++||||+++ +
T Consensus 57 ~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~-~ 135 (340)
T 3an0_A 57 MELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMDT-S 135 (340)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEEECCCSE-E
T ss_pred eEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEEHHHhhC-c
Confidence 4799999999999996 578999999987652 2334556666666 7778999999999999999999999999975 9
Q ss_pred hHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCC-CceecCCCCCCeEEcCCCCeEEecccccccccccCCCC
Q 005226 490 LANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPR-KFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNP 568 (707)
Q Consensus 490 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~-~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~ 568 (707)
|.+++.... .....+++..+..|+.||+.||+|||+ + +|+||||||+||+++.++.+||+|||+++.......
T Consensus 136 L~~~l~~~~-~~~~~l~~~~~~~i~~qi~~~l~~lH~---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~-- 209 (340)
T 3an0_A 136 LDKFYKQVI-DKGQTIPEDILGKIAVSIVKALEHLHS---KLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVA-- 209 (340)
T ss_dssp HHHHHHHHH-HTSCCCCHHHHHHHHHHHHHHHHHHHH---HTCCCCCSCCSTTEEECSTTCEEECCCSHHHHHSCHHH--
T ss_pred HHHHHHHHH-hcCCCCCHHHHHHHHHHHHHHHHHHhh---cCCeecCCCCHHHEEECCCCCEEEeeCCCceecccccc--
Confidence 999886421 012369999999999999999999998 5 999999999999999999999999999986542110
Q ss_pred CCCCCCcCCCCCCCCccccccCccccCCCCCC---CCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchhHHHH
Q 005226 569 SSSGGFMGGALPYMKPVQTEKTNNYRAPEARV---PGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVRW 645 (707)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~ 645 (707)
.....||+.|+|||++. ....++.++|||||||++|||+||+.||..... ....+...
T Consensus 210 ---------------~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~----~~~~~~~~ 270 (340)
T 3an0_A 210 ---------------KTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGT----PFQQLKQV 270 (340)
T ss_dssp ---------------HHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSC----HHHHHHHH
T ss_pred ---------------cccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccc----hHHHHHHH
Confidence 01235789999999863 235678999999999999999999999964221 11111111
Q ss_pred HHhhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 005226 646 VKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSE 700 (707)
Q Consensus 646 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~ 700 (707)
+ ....+ ... .......+.+++.+||+.||++||++.++++
T Consensus 271 ~----~~~~~--~~~---------~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 310 (340)
T 3an0_A 271 V----EEPSP--QLP---------ADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 310 (340)
T ss_dssp H----HSCCC--CCC---------GGGSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred h----cCCCC--CCC---------cccCCHHHHHHHHHHccCCcccCcCHHHHhc
Confidence 1 11110 000 0112345789999999999999999999976
No 219
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=2.7e-37 Score=332.20 Aligned_cols=253 Identities=22% Similarity=0.257 Sum_probs=189.4
Q ss_pred cceecccCeeEEEEEEeC-CCceEEEEEcCCCc--hhhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCcc------eEEE
Q 005226 412 AYVLGKSGLGIVYKVVLG-NGIPVAVRRLGEGG--EQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEK------LLIS 482 (707)
Q Consensus 412 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~------~lV~ 482 (707)
.+.||+|+||.||+|... +|+.||||++.... ....+.+.+|+.++++++||||+++++++...+.. ++||
T Consensus 47 ~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~ 126 (371)
T 4exu_A 47 PTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVM 126 (371)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCCCCEEEE
T ss_pred EeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccceeEEEEE
Confidence 347999999999999864 68999999987642 33357889999999999999999999999887655 9999
Q ss_pred EeecCCChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEeccccccccc
Q 005226 483 DFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLIN 562 (707)
Q Consensus 483 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~ 562 (707)
||+. |+|.+++.. .+++..+..++.||+.||+|||+ .+|+||||||+||+++.++.+||+|||+++...
T Consensus 127 e~~~-~~l~~~~~~-------~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~ 195 (371)
T 4exu_A 127 PFMQ-TDLQKIMGM-------EFSEEKIQYLVYQMLKGLKYIHS---AGVVHRDLKPGNLAVNEDCELKILDFGLARHAD 195 (371)
T ss_dssp ECCC-EEHHHHTTS-------CCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECSTTCC----
T ss_pred cccc-ccHHHHhhc-------CCCHHHHHHHHHHHHHHHHHHHH---CCCcCCCcCHHHeEECCCCCEEEEecCcccccc
Confidence 9997 689888843 38999999999999999999999 899999999999999999999999999997554
Q ss_pred ccCCCCCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchhH
Q 005226 563 ITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDL 642 (707)
Q Consensus 563 ~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~ 642 (707)
... ....||+.|+|||++.....++.++|||||||++|||++|+.||..... .+.
T Consensus 196 ~~~-------------------~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~------~~~ 250 (371)
T 4exu_A 196 AEM-------------------TGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDY------LDQ 250 (371)
T ss_dssp -----------------------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSH------HHH
T ss_pred cCc-------------------CCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCh------HHH
Confidence 211 1234688999999977657789999999999999999999999975321 111
Q ss_pred HHHHHhhccccCC-----Cc-hhchHHHHhh---------hhhHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 005226 643 VRWVKKGFEEENP-----LS-DMVDAMLLQE---------VHAKKEVIAVFHLALACTEADPEVRPRMKNVSE 700 (707)
Q Consensus 643 ~~~~~~~~~~~~~-----~~-~~~d~~l~~~---------~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~ 700 (707)
...+......... +. .......... .........+.+++.+|++.||++|||++|+++
T Consensus 251 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 323 (371)
T 4exu_A 251 LTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT 323 (371)
T ss_dssp HHHHHHHHCCCCHHHHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred HHHHHHHhCCCcHHHHHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhc
Confidence 1111111100000 00 0000000000 000112457889999999999999999999975
No 220
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=3.9e-37 Score=323.07 Aligned_cols=243 Identities=22% Similarity=0.330 Sum_probs=190.0
Q ss_pred ceecccCeeEEEEEEeC-CCceEEEEEcCCCchhhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCcceEEEEeecCCChH
Q 005226 413 YVLGKSGLGIVYKVVLG-NGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLA 491 (707)
Q Consensus 413 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~gsL~ 491 (707)
+.||+|+||.||+|... +|..||+|.+.... ....+.+|++++++++||||+++++++..++..++||||+++|+|.
T Consensus 35 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 112 (314)
T 3com_A 35 EKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVS 112 (314)
T ss_dssp EECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTEEHH
T ss_pred eeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEeecCCCCCHH
Confidence 47999999999999975 58999999987543 2367899999999999999999999999999999999999999999
Q ss_pred HHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEecccccccccccCCCCCCC
Q 005226 492 NALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSS 571 (707)
Q Consensus 492 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~ 571 (707)
+++.... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++.........
T Consensus 113 ~~~~~~~----~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~---- 181 (314)
T 3com_A 113 DIIRLRN----KTLTEDEIATILQSTLKGLEYLHF---MRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMAK---- 181 (314)
T ss_dssp HHHHHHT----CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCEECBTTBSC----
T ss_pred HHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHh---CCCcCCCcCHHHEEECCCCCEEEeecccchhhhhhccc----
Confidence 9997432 358999999999999999999999 89999999999999999999999999999765422111
Q ss_pred CCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchhHHHHHHhhcc
Q 005226 572 GGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVRWVKKGFE 651 (707)
Q Consensus 572 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~ 651 (707)
.....|+..|+|||++.. ..++.++||||||+++|||++|+.||..... ............
T Consensus 182 ------------~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~g~~p~~~~~~------~~~~~~~~~~~~ 242 (314)
T 3com_A 182 ------------RNTVIGTPFWMAPEVIQE-IGYNCVADIWSLGITAIEMAEGKPPYADIHP------MRAIFMIPTNPP 242 (314)
T ss_dssp ------------BCCCCSCGGGCCHHHHSS-SCBCTTHHHHHHHHHHHHHHHSSCTTTTSCH------HHHHHHHHHSCC
T ss_pred ------------cCccCCCCCccChhhcCC-CCCCccccHHHHHHHHHHHHhCCCCCCCCCh------HHHHHHHhcCCC
Confidence 122356899999999765 5688999999999999999999999964321 111111111111
Q ss_pred ccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 005226 652 EENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSE 700 (707)
Q Consensus 652 ~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~ 700 (707)
.... ........+.+++.+||+.||++||++.++++
T Consensus 243 ~~~~-------------~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~ 278 (314)
T 3com_A 243 PTFR-------------KPELWSDNFTDFVKQCLVKSPEQRATATQLLQ 278 (314)
T ss_dssp CCCS-------------SGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred cccC-------------CcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 0000 00112345789999999999999999999975
No 221
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.3e-37 Score=336.10 Aligned_cols=255 Identities=21% Similarity=0.289 Sum_probs=186.5
Q ss_pred ceecccCeeEEEEEEe-CCCceEEEEEcCCCchhhHHHHHHHHHHHHhcCCCceeeeEEEEEcCC---------------
Q 005226 413 YVLGKSGLGIVYKVVL-GNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPD--------------- 476 (707)
Q Consensus 413 ~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~--------------- 476 (707)
+.||+|+||+||+|.. .+|+.||||++..... ...+|++++++++||||+++++++...+
T Consensus 13 ~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~----~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~ 88 (383)
T 3eb0_A 13 KTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR----YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQPPDDHNK 88 (383)
T ss_dssp EEEECC-CEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHTTCCCTTBCCEEEEEEEC----------------
T ss_pred EEEEeccCEEEEEEEECCCCCEEEEEEEecCcc----hHHHHHHHHHHcCCCCccchhheeeecCccccccccccccccc
Confidence 4899999999999986 5789999999865432 2347999999999999999999985432
Q ss_pred -----------------------cceEEEEeecCCChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCce
Q 005226 477 -----------------------EKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFV 533 (707)
Q Consensus 477 -----------------------~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ii 533 (707)
..++||||++ |+|.+.+.... .....+++..+..++.||+.||+|||+ .+|+
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~-~~~~~l~~~~~~~i~~qi~~aL~~LH~---~gi~ 163 (383)
T 3eb0_A 89 LGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFI-RSGRSIPMNLISIYIYQLFRAVGFIHS---LGIC 163 (383)
T ss_dssp ---------------------CCEEEEEECCCS-EEHHHHHHHHH-HTTCCCCHHHHHHHHHHHHHHHHHHHT---TTEE
T ss_pred ccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHH-hcCCCCCHHHHHHHHHHHHHHHHHHHH---CcCc
Confidence 3689999998 58887775321 012369999999999999999999999 8999
Q ss_pred ecCCCCCCeEEc-CCCCeEEecccccccccccCCCCCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHH
Q 005226 534 HGDIKPSNILLD-NDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVY 612 (707)
Q Consensus 534 HrDlk~~NIll~-~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~ 612 (707)
||||||+||+++ .++.+||+|||+|+........ ....+|+.|+|||++.+...++.++|||
T Consensus 164 H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~-----------------~~~~~t~~y~aPE~~~~~~~~~~~~Diw 226 (383)
T 3eb0_A 164 HRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPS-----------------VAYICSRFYRAPELMLGATEYTPSIDLW 226 (383)
T ss_dssp CSCCCGGGEEEETTTTEEEECCCTTCEECCTTSCC-----------------CCCCCCSSCCCHHHHTTCSSCCTHHHHH
T ss_pred cCccCHHHEEEcCCCCcEEEEECCCCcccCCCCCC-----------------cCcccCCCccCHHHhcCCCCCCcchhhh
Confidence 999999999998 6889999999999866432211 2234588999999877656689999999
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCccchhHHHHHHhhccccC--------------CCchhchHHHHhhhhhHHHHHHHH
Q 005226 613 SFGVVLLELLTGKSPELSPTTSTSIEVPDLVRWVKKGFEEEN--------------PLSDMVDAMLLQEVHAKKEVIAVF 678 (707)
Q Consensus 613 S~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~d~~l~~~~~~~~~~~~l~ 678 (707)
|+||++|||++|+.||...... ..+.+.+.. ..... .+......... ..........+.
T Consensus 227 slG~il~ell~g~~pf~~~~~~-----~~~~~i~~~-~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 299 (383)
T 3eb0_A 227 SIGCVFGELILGKPLFSGETSI-----DQLVRIIQI-MGTPTKEQMIRMNPHYTEVRFPTLKAKDWR-KILPEGTPSLAI 299 (383)
T ss_dssp HHHHHHHHHHHSSCSSCCSSHH-----HHHHHHHHH-HCCCCHHHHHHHCTTC--CCCCCCCCCCHH-HHSCTTCCHHHH
T ss_pred hHHHHHHHHHhCCCCCCCCChH-----HHHHHHHHH-hCCCCHHHHHHhCcccccccCCccCcccHH-hhCCCCCCHHHH
Confidence 9999999999999999753211 111111111 10000 00000000000 001112335688
Q ss_pred HHHHhccCCCCCCCCChHHHHH
Q 005226 679 HLALACTEADPEVRPRMKNVSE 700 (707)
Q Consensus 679 ~l~~~Cl~~dP~~RPs~~~v~~ 700 (707)
+++.+||+.||++|||+.|+++
T Consensus 300 ~li~~~L~~dP~~R~t~~e~l~ 321 (383)
T 3eb0_A 300 DLLEQILRYEPDLRINPYEAMA 321 (383)
T ss_dssp HHHHHHCCSSGGGSCCHHHHHT
T ss_pred HHHHHHccCChhhCCCHHHHhc
Confidence 9999999999999999999974
No 222
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=1e-37 Score=338.01 Aligned_cols=256 Identities=22% Similarity=0.303 Sum_probs=185.9
Q ss_pred cceecccCeeEEEEEEeCCCceEEEEEcCCCchhhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCc------ceEEEEee
Q 005226 412 AYVLGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDE------KLLISDFI 485 (707)
Q Consensus 412 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~------~~lV~e~~ 485 (707)
.++||+|+||+||+|...++..||+|++..... ...+|++++++++||||+++++++...+. .++||||+
T Consensus 45 ~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~----~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~lv~e~~ 120 (394)
T 4e7w_A 45 CKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR----FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYV 120 (394)
T ss_dssp EEEEEEETTEEEEEEEETTTEEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEEEEECC
T ss_pred eEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc----hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEEEeecc
Confidence 348999999999999987777799998765432 22469999999999999999999966543 67999999
Q ss_pred cCCChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEc-CCCCeEEeccccccccccc
Q 005226 486 SNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLD-NDFQPYISDFGLSRLINIT 564 (707)
Q Consensus 486 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~-~~~~~kl~DfGla~~~~~~ 564 (707)
+++.+....+... ....+++..+..++.||+.||+|||+ .+|+||||||+|||++ .++.+||+|||+|+.....
T Consensus 121 ~~~l~~~~~~~~~--~~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~~~ 195 (394)
T 4e7w_A 121 PETVYRASRHYAK--LKQTMPMLLIKLYMYQLLRSLAYIHS---IGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAG 195 (394)
T ss_dssp SEEHHHHHHHHHH--TTSCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEETTTTEEEECCCTTCEECCTT
T ss_pred CccHHHHHHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCCCHHHEEEcCCCCcEEEeeCCCcccccCC
Confidence 8754433332111 12369999999999999999999999 8999999999999999 7899999999999876432
Q ss_pred CCCCCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchhHHH
Q 005226 565 GNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVR 644 (707)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~ 644 (707)
... ....+|+.|+|||++.+...++.++|||||||++|||++|+.||...... ..+.+
T Consensus 196 ~~~-----------------~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~-----~~l~~ 253 (394)
T 4e7w_A 196 EPN-----------------VSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGI-----DQLVE 253 (394)
T ss_dssp CCC-----------------CSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-----HHHHH
T ss_pred CCC-----------------cccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-----HHHHH
Confidence 211 22346889999999776567899999999999999999999999753211 11111
Q ss_pred HHHhhccccC--------------CCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 005226 645 WVKKGFEEEN--------------PLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSE 700 (707)
Q Consensus 645 ~~~~~~~~~~--------------~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~ 700 (707)
.+.. ..... .+...-...+. .........++.+++.+||+.||++|||+.|+++
T Consensus 254 i~~~-~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 321 (394)
T 4e7w_A 254 IIKV-LGTPSREQIKTMNPNYMEHKFPQIRPHPFS-KVFRPRTPPDAIDLISRLLEYTPSARLTAIEALC 321 (394)
T ss_dssp HHHH-HCCCCHHHHHHHCGGGSSSCCCCCCCCCHH-HHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred HHHH-hCCCCHHHHHhhChhhhhhccccccCCcHH-HhccccCCHHHHHHHHHHhCCChhhCCCHHHHhc
Confidence 1111 00000 00000000000 0001113357889999999999999999999975
No 223
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=1.4e-37 Score=339.67 Aligned_cols=257 Identities=26% Similarity=0.320 Sum_probs=186.1
Q ss_pred cceecccCeeEEEEEEeC-CCceEEEEEcCCCchhhHHHHHHHHHHHHhcCCCceeeeEEEEEcCC------cceEEEEe
Q 005226 412 AYVLGKSGLGIVYKVVLG-NGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPD------EKLLISDF 484 (707)
Q Consensus 412 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~------~~~lV~e~ 484 (707)
.+.||+|+||.||+|... +|+.||||++.... +.+.+|++++++++|||||++++++...+ ..++||||
T Consensus 59 ~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv~e~ 134 (420)
T 1j1b_A 59 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDY 134 (420)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEEEEEC
T ss_pred eeEEeeCCCEEEEEEEECCCCcEEEEEEecccc----hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEeehhc
Confidence 348999999999999975 68999999986542 22347999999999999999999986432 25689999
Q ss_pred ecCCChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCC-CCeEEecccccccccc
Q 005226 485 ISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDND-FQPYISDFGLSRLINI 563 (707)
Q Consensus 485 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~-~~~kl~DfGla~~~~~ 563 (707)
+++ +|.+.+.... .....+++..+..++.||+.||+|||+ .+|+||||||+|||++.+ +.+||+|||+++....
T Consensus 135 ~~~-~l~~~~~~~~-~~~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~~~ 209 (420)
T 1j1b_A 135 VPE-TVYRVARHYS-RAKQTLPVIYVKLYMYQLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 209 (420)
T ss_dssp CCE-EHHHHHHHHH-HTTCCCCHHHHHHHHHHHHHHHHHHHT---TTEECSCCSGGGEEEETTTTEEEECCCTTCEECCT
T ss_pred ccc-cHHHHHHHHh-hccCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChhhEEEeCCCCeEEeccchhhhhccc
Confidence 975 6766664311 112369999999999999999999999 899999999999999965 5689999999987543
Q ss_pred cCCCCCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchhHH
Q 005226 564 TGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLV 643 (707)
Q Consensus 564 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~~ 643 (707)
.... ....||+.|+|||++.....++.++|||||||++|||++|+.||..... ...+.
T Consensus 210 ~~~~-----------------~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~-----~~~l~ 267 (420)
T 1j1b_A 210 GEPN-----------------VSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG-----VDQLV 267 (420)
T ss_dssp TCCC-----------------CSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHH
T ss_pred CCCc-----------------eeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCH-----HHHHH
Confidence 2211 1235689999999977656789999999999999999999999975321 11222
Q ss_pred HHHHhhccc--------cC-----CCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 005226 644 RWVKKGFEE--------EN-----PLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSE 700 (707)
Q Consensus 644 ~~~~~~~~~--------~~-----~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~ 700 (707)
+.+...-.. .. .+..+....+. .........++.+|+.+||+.||++||++.|+++
T Consensus 268 ~i~~~lg~p~~~~~~~~~~~~~~~~~p~~~~~~~~-~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~ 336 (420)
T 1j1b_A 268 EIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWT-KVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 336 (420)
T ss_dssp HHHHHHCSCCHHHHHHHCSCCCCCCCCCCCCCCHH-HHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHHHHhCCCCHHHHHhhChhhhhhccCccCCCCHH-HhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhC
Confidence 222110000 00 00000000000 0001122356889999999999999999999975
No 224
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=2.7e-37 Score=327.40 Aligned_cols=252 Identities=19% Similarity=0.278 Sum_probs=193.6
Q ss_pred ceecccCeeEEEEEEe--CCCceEEEEEcCCCchhhHHHHHHHHHHHHhcCCCc------eeeeEEEEEcCCcceEEEEe
Q 005226 413 YVLGKSGLGIVYKVVL--GNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPN------IVKLRAYYWAPDEKLLISDF 484 (707)
Q Consensus 413 ~~lG~G~~g~Vy~~~~--~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~n------iv~l~~~~~~~~~~~lV~e~ 484 (707)
+.||+|+||.||+|.. .+++.||||+++.... ..+.+.+|+++++.++|++ ++++++++...+..++||||
T Consensus 20 ~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~ 98 (339)
T 1z57_A 20 DTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDR-YCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHICIVFEL 98 (339)
T ss_dssp EEEEEETTEEEEEEEETTTTTEEEEEEEECSSHH-HHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTEEEEEEEC
T ss_pred EEEecCCCeEEEEEEecCCCCcEEEEEEEecCCc-hhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCcEEEEEcC
Confidence 4799999999999986 3688999999976533 3477889999999997765 99999999999999999999
Q ss_pred ecCCChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcC------------------
Q 005226 485 ISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDN------------------ 546 (707)
Q Consensus 485 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~------------------ 546 (707)
+ +++|.+++.... ...+++..+..++.||+.||+|||+ ++|+||||||+||+++.
T Consensus 99 ~-~~~l~~~l~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~~ 171 (339)
T 1z57_A 99 L-GLSTYDFIKENG---FLPFRLDHIRKMAYQICKSVNFLHS---NKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTL 171 (339)
T ss_dssp C-CCBHHHHHHHTT---TCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESCCCEEEEEC----CEEEEE
T ss_pred C-CCCHHHHHHhcC---CCCCcHHHHHHHHHHHHHHHHHHHH---CCCcCCCCCHHHEEEeccccccccCCccccccccc
Confidence 9 899999998653 2358999999999999999999999 89999999999999987
Q ss_pred -CCCeEEecccccccccccCCCCCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCC
Q 005226 547 -DFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGK 625 (707)
Q Consensus 547 -~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~ 625 (707)
++.+||+|||+++...... ....||+.|+|||++.. ..++.++|||||||++|||++|+
T Consensus 172 ~~~~~kl~Dfg~~~~~~~~~-------------------~~~~gt~~y~aPE~~~~-~~~~~~~Di~slG~il~el~~g~ 231 (339)
T 1z57_A 172 INPDIKVVDFGSATYDDEHH-------------------STLVSTRHYRAPEVILA-LGWSQPCDVWSIGCILIEYYLGF 231 (339)
T ss_dssp SCCCEEECCCSSCEETTSCC-------------------CSSCSCGGGCCHHHHTT-SCCCTHHHHHHHHHHHHHHHHSS
T ss_pred cCCCceEeeCcccccCcccc-------------------ccccCCccccChHHhhC-CCCCcchhhHHHHHHHHHHHhCC
Confidence 6689999999997643211 22356899999999764 67899999999999999999999
Q ss_pred CCCCCCCCCCCccchhHHHHHHhhccccCCCchhch----------------------HHHH--------hhhhhHHHHH
Q 005226 626 SPELSPTTSTSIEVPDLVRWVKKGFEEENPLSDMVD----------------------AMLL--------QEVHAKKEVI 675 (707)
Q Consensus 626 ~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d----------------------~~l~--------~~~~~~~~~~ 675 (707)
.||...... +....+....... + ..+.. .... ..........
T Consensus 232 ~pf~~~~~~------~~~~~~~~~~~~~-p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (339)
T 1z57_A 232 TVFPTHDSK------EHLAMMERILGPL-P-KHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHE 303 (339)
T ss_dssp CSCCCSCHH------HHHHHHHHHHCSC-C-HHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHH
T ss_pred CCCCCCChH------HHHHHHHHHhCCC-C-HHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHH
Confidence 999753221 1111111111100 0 00000 0000 0001123456
Q ss_pred HHHHHHHhccCCCCCCCCChHHHHH
Q 005226 676 AVFHLALACTEADPEVRPRMKNVSE 700 (707)
Q Consensus 676 ~l~~l~~~Cl~~dP~~RPs~~~v~~ 700 (707)
.+.+++.+||+.||++|||++|+++
T Consensus 304 ~l~~li~~~L~~dP~~Rpt~~ell~ 328 (339)
T 1z57_A 304 RLFDLIQKMLEYDPAKRITLREALK 328 (339)
T ss_dssp HHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred HHHHHHHHHhCcCcccccCHHHHhc
Confidence 7899999999999999999999985
No 225
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=4.1e-38 Score=338.67 Aligned_cols=249 Identities=14% Similarity=0.065 Sum_probs=174.4
Q ss_pred cceecccCeeEEEEEEeC-CCceEEEEEcCCCch---hhHHHHHHHHHHHHhc--CCCceeeeE-------EEEEcCC--
Q 005226 412 AYVLGKSGLGIVYKVVLG-NGIPVAVRRLGEGGE---QRHREFVTEVQAIAKV--KHPNIVKLR-------AYYWAPD-- 476 (707)
Q Consensus 412 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l--~H~niv~l~-------~~~~~~~-- 476 (707)
.+.||+|+||.||+|... +++.||||++..... ...+.+.+|+.+++.+ +||||++++ +++..++
T Consensus 67 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~~~~~~ 146 (371)
T 3q60_A 67 VEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVAVQSQP 146 (371)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEEETTSC
T ss_pred eeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehheecCCCC
Confidence 358999999999999965 789999999987542 3346677886555555 699988755 5554433
Q ss_pred ---------------cceEEEEeecCCChHHHHhCCCCCCCCCCCHHHH------HHHHHHHHHHHHHHhhcCCCCceec
Q 005226 477 ---------------EKLLISDFISNGNLANALRGRNGQPSTSLSWSTR------LRIAKGTARGLAYLHECSPRKFVHG 535 (707)
Q Consensus 477 ---------------~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~------~~i~~~ia~~L~yLH~~~~~~iiHr 535 (707)
..++||||++ |+|.+++.... ..+.+..+ ..++.||+.||+|||+ ++|+||
T Consensus 147 ~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~----~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~---~~ivHr 218 (371)
T 3q60_A 147 PFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLD----FVYVFRGDEGILALHILTAQLIRLAANLQS---KGLVHG 218 (371)
T ss_dssp SSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHH----HSCCCCHHHHHHHHHHHHHHHHHHHHHHHH---TTEEET
T ss_pred CeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhc----cccchhhhhhhhhHHHHHHHHHHHHHHHHH---CCCccC
Confidence 2699999998 89999998642 13455566 7888999999999999 899999
Q ss_pred CCCCCCeEEcCCCCeEEecccccccccccCCCCCCCCCCcCCCCCCCCccccccCccccCCCCCCCC-CCCCchhhHHHH
Q 005226 536 DIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPG-NRPMQKWDVYSF 614 (707)
Q Consensus 536 Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~~DV~S~ 614 (707)
||||+|||++.++.+||+|||+|+...... ....+|+.|+|||++... ..++.++|||||
T Consensus 219 Dikp~NIll~~~~~~kL~DFG~a~~~~~~~-------------------~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSl 279 (371)
T 3q60_A 219 HFTPDNLFIMPDGRLMLGDVSALWKVGTRG-------------------PASSVPVTYAPREFLNASTATFTHALNAWQL 279 (371)
T ss_dssp TCSGGGEEECTTSCEEECCGGGEEETTCEE-------------------EGGGSCGGGCCHHHHTCSEEECCHHHHHHHH
T ss_pred cCCHHHEEECCCCCEEEEecceeeecCCCc-------------------cCccCCcCCcChhhccCCCCCcCccccHHHH
Confidence 999999999999999999999998654211 123457899999997531 467899999999
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCccchhHHHHHHhhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCC
Q 005226 615 GVVLLELLTGKSPELSPTTSTSIEVPDLVRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPR 694 (707)
Q Consensus 615 Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs 694 (707)
||++|||+||+.||............. ........ .....+ ........+.+++.+||+.||++|||
T Consensus 280 G~il~elltg~~Pf~~~~~~~~~~~~~------~~~~~~~~-~~~~~~------~~~~~~~~~~~li~~~L~~dP~~Rpt 346 (371)
T 3q60_A 280 GLSIYRVWCLFLPFGLVTPGIKGSWKR------PSLRVPGT-DSLAFG------SCTPLPDFVKTLIGRFLNFDRRRRLL 346 (371)
T ss_dssp HHHHHHHHHSSCSTTBCCTTCTTCCCB------CCTTSCCC-CSCCCT------TSSCCCHHHHHHHHHHTCSSTTTCCC
T ss_pred HHHHHHHHhCCCCCCCcCcccccchhh------hhhhhccc-cccchh------hccCCCHHHHHHHHHHcCCChhhCCC
Confidence 999999999999997653321100000 00000000 000000 00122356789999999999999999
Q ss_pred hHHHHH
Q 005226 695 MKNVSE 700 (707)
Q Consensus 695 ~~~v~~ 700 (707)
+.++++
T Consensus 347 ~~e~l~ 352 (371)
T 3q60_A 347 PLEAME 352 (371)
T ss_dssp HHHHTT
T ss_pred HHHHhc
Confidence 999874
No 226
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=2.4e-37 Score=331.20 Aligned_cols=257 Identities=20% Similarity=0.289 Sum_probs=179.3
Q ss_pred ceecccCeeEEEEEEeC-CCceEEEEEcCCCchhhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCc-------ceEEEEe
Q 005226 413 YVLGKSGLGIVYKVVLG-NGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDE-------KLLISDF 484 (707)
Q Consensus 413 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~-------~~lV~e~ 484 (707)
+.||+|+||.||+|... ++..||||++....... ..+.+|++.++.++||||+++++++...+. .++||||
T Consensus 29 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~~lv~e~ 107 (360)
T 3e3p_A 29 RMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFR-NRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEY 107 (360)
T ss_dssp ----------CEEEEETTTCCEEEEEEEECCTTCC-CHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTTCEEEEEEEEC
T ss_pred EEEecCCCeEEEEEEECCCCCEEEEEEEecCcccc-HHHHHHHHHHHhcCCCCcccHHHhhhccccccccceeEEEEeec
Confidence 47999999999999974 68999999886543322 456788899999999999999999976443 6899999
Q ss_pred ecCCChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHh--hcCCCCceecCCCCCCeEEcC-CCCeEEecccccccc
Q 005226 485 ISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLH--ECSPRKFVHGDIKPSNILLDN-DFQPYISDFGLSRLI 561 (707)
Q Consensus 485 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH--~~~~~~iiHrDlk~~NIll~~-~~~~kl~DfGla~~~ 561 (707)
+++ +|.+.+.... .....+++..+..++.|++.||.||| + ++|+||||||+|||++. ++.+||+|||+++..
T Consensus 108 ~~~-~l~~~~~~~~-~~~~~~~~~~~~~~~~qi~~al~~lH~~~---~~ivH~Dlkp~NIll~~~~~~~kl~Dfg~a~~~ 182 (360)
T 3e3p_A 108 VPD-TLHRCCRNYY-RRQVAPPPILIKVFLFQLIRSIGCLHLPS---VNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKL 182 (360)
T ss_dssp CSC-BHHHHHHHHH-TTTCCCCHHHHHHHHHHHHHHHHHHTSTT---TCCBCSCCCGGGEEEETTTTEEEECCCTTCBCC
T ss_pred ccc-cHHHHHHHHh-hcccCCCHHHHHHHHHHHHHHHHHHhCCC---CCeecCcCCHHHEEEeCCCCcEEEeeCCCceec
Confidence 976 5555443211 11236899999999999999999999 7 89999999999999997 899999999999866
Q ss_pred cccCCCCCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchh
Q 005226 562 NITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPD 641 (707)
Q Consensus 562 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~ 641 (707)
...... ....||+.|+|||++.....++.++|||||||++|||++|+.||..... ..
T Consensus 183 ~~~~~~-----------------~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~------~~ 239 (360)
T 3e3p_A 183 SPSEPN-----------------VAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNS------AG 239 (360)
T ss_dssp CTTSCC-----------------CSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSH------HH
T ss_pred CCCCCc-----------------ccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCCh------HH
Confidence 532211 2234689999999976656689999999999999999999999975321 11
Q ss_pred HHHHHHhhccccCCCchhchHH----------------HHh--hhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 005226 642 LVRWVKKGFEEENPLSDMVDAM----------------LLQ--EVHAKKEVIAVFHLALACTEADPEVRPRMKNVSE 700 (707)
Q Consensus 642 ~~~~~~~~~~~~~~~~~~~d~~----------------l~~--~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~ 700 (707)
....+........ .+..... ... ..........+.+++.+||+.||++|||+.|+++
T Consensus 240 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 314 (360)
T 3e3p_A 240 QLHEIVRVLGCPS--REVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALC 314 (360)
T ss_dssp HHHHHHHHHCCCC--HHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred HHHHHHHHcCCCC--HHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhc
Confidence 1111111110000 0000000 000 0001113467889999999999999999999975
No 227
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.2e-37 Score=326.81 Aligned_cols=245 Identities=22% Similarity=0.317 Sum_probs=187.2
Q ss_pred ceecccCeeEEEEEEe-CCCceEEEEEcCCCchhhHHHHHHHHHHHHhc-CCCceeeeEEEEEc------CCcceEEEEe
Q 005226 413 YVLGKSGLGIVYKVVL-GNGIPVAVRRLGEGGEQRHREFVTEVQAIAKV-KHPNIVKLRAYYWA------PDEKLLISDF 484 (707)
Q Consensus 413 ~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~------~~~~~lV~e~ 484 (707)
+.||+|+||.||+|.. .+++.||||++...... ...+.+|+.+++++ +||||+++++++.. .+..++||||
T Consensus 30 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~~lv~e~ 108 (326)
T 2x7f_A 30 ELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDE-EEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEF 108 (326)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECCSST-THHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCCEEEEEEEC
T ss_pred EEeccCCCEEEEEEEECCCCCeEEEEEEecCccc-HHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccceEEEEEEc
Confidence 4899999999999997 47899999998755433 37789999999999 89999999999987 4577999999
Q ss_pred ecCCChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEeccccccccccc
Q 005226 485 ISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINIT 564 (707)
Q Consensus 485 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~~ 564 (707)
+++|+|.+++.... ...+++..+..++.||+.||+|||+ .+|+||||||+||+++.++.+||+|||++......
T Consensus 109 ~~~~~L~~~l~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 182 (326)
T 2x7f_A 109 CGAGSVTDLIKNTK---GNTLKEEWIAYICREILRGLSHLHQ---HKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRT 182 (326)
T ss_dssp CTTEEHHHHHHHSG---GGCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEECTTCCEEECCCTTTC-----
T ss_pred CCCCcHHHHHHhcc---cCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCcHHHEEEcCCCCEEEeeCcCceecCcC
Confidence 99999999998643 2368999999999999999999999 89999999999999999999999999998765422
Q ss_pred CCCCCCCCCCcCCCCCCCCccccccCccccCCCCCCC----CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccch
Q 005226 565 GNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVP----GNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVP 640 (707)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~ 640 (707)
... .....|+..|+|||++.. +..++.++||||||+++|||++|+.||..... .
T Consensus 183 ~~~----------------~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~------~ 240 (326)
T 2x7f_A 183 VGR----------------RNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHP------M 240 (326)
T ss_dssp ------------------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCH------H
T ss_pred ccc----------------cccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcH------H
Confidence 110 122356899999998652 35678999999999999999999999864321 1
Q ss_pred hHHHHHHhhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 005226 641 DLVRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSE 700 (707)
Q Consensus 641 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~ 700 (707)
.....+...... ... .......+.+++.+||+.||++||++.++++
T Consensus 241 ~~~~~~~~~~~~-----~~~---------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 286 (326)
T 2x7f_A 241 RALFLIPRNPAP-----RLK---------SKKWSKKFQSFIESCLVKNHSQRPATEQLMK 286 (326)
T ss_dssp HHHHHHHHSCCC-----CCS---------CSCSCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred HHHHHhhcCccc-----cCC---------ccccCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 111111111000 000 0112245789999999999999999999986
No 228
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=3.5e-37 Score=354.94 Aligned_cols=237 Identities=22% Similarity=0.278 Sum_probs=191.7
Q ss_pred cceecccCeeEEEEEEeC-CCceEEEEEcCCCc---hhhHHHHHHHHHHHHhc-CCCceeeeEEEEEcCCcceEEEEeec
Q 005226 412 AYVLGKSGLGIVYKVVLG-NGIPVAVRRLGEGG---EQRHREFVTEVQAIAKV-KHPNIVKLRAYYWAPDEKLLISDFIS 486 (707)
Q Consensus 412 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lV~e~~~ 486 (707)
.++||+|+||.||+|... +++.||||+++... ......+..|..++..+ +||+|+++++++.+.+..|+||||++
T Consensus 346 ~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~lV~E~~~ 425 (674)
T 3pfq_A 346 LMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVN 425 (674)
T ss_dssp EEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEEEEECCC
T ss_pred EEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEEEEeCcC
Confidence 358999999999999965 67889999987532 22346788899999988 79999999999999999999999999
Q ss_pred CCChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEecccccccccccCC
Q 005226 487 NGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGN 566 (707)
Q Consensus 487 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~~ 566 (707)
+|+|.++++..+ .+++..+..|+.||+.||+|||+ ++||||||||+|||++.++.+||+|||+|+.......
T Consensus 426 gg~L~~~l~~~~-----~~~~~~~~~~~~qi~~aL~~LH~---~gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~~ 497 (674)
T 3pfq_A 426 GGDLMYHIQQVG-----RFKEPHAVFYAAEIAIGLFFLQS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGV 497 (674)
T ss_dssp SCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHH---TSEECCCCCSTTEEECSSSCEEECCCTTCEECCCTTC
T ss_pred CCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHh---CCeEeccCChhhEEEcCCCcEEEeecceeeccccCCc
Confidence 999999998643 59999999999999999999999 8999999999999999999999999999985432211
Q ss_pred CCCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchhHHHHH
Q 005226 567 NPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVRWV 646 (707)
Q Consensus 567 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~ 646 (707)
. .....||+.|+|||++.. ..++.++|||||||++|||++|+.||..... ..+.+.+
T Consensus 498 ~----------------~~~~~GT~~Y~APE~l~~-~~~~~~~DvwSlGvilyelltG~~Pf~~~~~------~~~~~~i 554 (674)
T 3pfq_A 498 T----------------TKTFCGTPDYIAPEIIAY-QPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE------DELFQSI 554 (674)
T ss_dssp C----------------BCCCCSCSSSCCHHHHTC-CCBSTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHH
T ss_pred c----------------cccccCCCcccCHhhhcC-CCCCccceEechHHHHHHHHcCCCCCCCCCH------HHHHHHH
Confidence 1 123467999999999765 6789999999999999999999999975321 1222222
Q ss_pred HhhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCCh
Q 005226 647 KKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRM 695 (707)
Q Consensus 647 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~ 695 (707)
. .....+. .....++.+|+.+||+.||++||++
T Consensus 555 ~---~~~~~~p-------------~~~s~~~~~li~~lL~~dP~~R~~~ 587 (674)
T 3pfq_A 555 M---EHNVAYP-------------KSMSKEAVAICKGLMTKHPGKRLGC 587 (674)
T ss_dssp H---SSCCCCC-------------TTSCHHHHHHHHHHSCSSSTTCTTC
T ss_pred H---hCCCCCC-------------ccCCHHHHHHHHHHccCCHHHCCCC
Confidence 1 1111111 1223457899999999999999998
No 229
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=6.5e-37 Score=319.88 Aligned_cols=246 Identities=20% Similarity=0.280 Sum_probs=189.3
Q ss_pred cceecccCeeEEEEEEeC-CCceEEEEEcCCCc----hhhHHHHHHHHHHHHhcCCCceeeeEEEEEc--CCcceEEEEe
Q 005226 412 AYVLGKSGLGIVYKVVLG-NGIPVAVRRLGEGG----EQRHREFVTEVQAIAKVKHPNIVKLRAYYWA--PDEKLLISDF 484 (707)
Q Consensus 412 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~--~~~~~lV~e~ 484 (707)
.+.||+|+||.||++... ++..||+|++.... ......+.+|++++++++||||+++++++.. .+..++||||
T Consensus 10 ~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~ 89 (305)
T 2wtk_C 10 GDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEY 89 (305)
T ss_dssp CCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CEEEEEEC
T ss_pred eeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeEEEEehh
Confidence 348999999999999964 68899999987542 2234779999999999999999999999854 4578999999
Q ss_pred ecCCChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEeccccccccccc
Q 005226 485 ISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINIT 564 (707)
Q Consensus 485 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~~ 564 (707)
+++| |.+++.... ...+++..+..++.||+.||+|||+ ++|+||||||+||+++.++.+||+|||++......
T Consensus 90 ~~~~-l~~~~~~~~---~~~~~~~~~~~~~~qi~~al~~LH~---~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~ 162 (305)
T 2wtk_C 90 CVCG-MQEMLDSVP---EKRFPVCQAHGYFCQLIDGLEYLHS---QGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPF 162 (305)
T ss_dssp CSEE-HHHHHHHST---TCSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTTCEECCTT
T ss_pred ccCC-HHHHHHhCc---ccccCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCcccEEEcCCCcEEeeccccccccCcc
Confidence 9876 777776543 2369999999999999999999999 89999999999999999999999999999865422
Q ss_pred CCCCCCCCCCcCCCCCCCCccccccCccccCCCCCCCC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchhHH
Q 005226 565 GNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPG-NRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLV 643 (707)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~~ 643 (707)
..... .....|+..|+|||++... ..++.++||||||+++|||++|+.||.... .....
T Consensus 163 ~~~~~--------------~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~------~~~~~ 222 (305)
T 2wtk_C 163 AADDT--------------CRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDN------IYKLF 222 (305)
T ss_dssp CSSCE--------------ECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSS------HHHHH
T ss_pred ccccc--------------cccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCch------HHHHH
Confidence 11100 0233578999999986542 234679999999999999999999996421 11222
Q ss_pred HHHHhhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 005226 644 RWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSE 700 (707)
Q Consensus 644 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~ 700 (707)
+.+... ...+. ......+.+++.+||+.||++||+++++++
T Consensus 223 ~~i~~~---~~~~~-------------~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 263 (305)
T 2wtk_C 223 ENIGKG---SYAIP-------------GDCGPPLSDLLKGMLEYEPAKRFSIRQIRQ 263 (305)
T ss_dssp HHHHHC---CCCCC-------------SSSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred HHHhcC---CCCCC-------------CccCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 222111 11100 112345678999999999999999999986
No 230
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=2.5e-37 Score=339.14 Aligned_cols=252 Identities=23% Similarity=0.312 Sum_probs=183.2
Q ss_pred ceecccCeeEEEEEEeCCCceEEEEEcCCCchhhHHHHHHHHHHHHhc-CCCceeeeEEEEEcCCcceEEEEeecCCChH
Q 005226 413 YVLGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKV-KHPNIVKLRAYYWAPDEKLLISDFISNGNLA 491 (707)
Q Consensus 413 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lV~e~~~~gsL~ 491 (707)
++||+|+||+||.+...+|+.||||++.... .+.+.+|+++++++ +||||+++++++.+++..++||||+. |+|.
T Consensus 21 ~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~~---~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~-gsL~ 96 (434)
T 2rio_A 21 KILGYGSSGTVVFQGSFQGRPVAVKRMLIDF---CDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN-LNLQ 96 (434)
T ss_dssp EEEEECSTTCEEEEEESSSSEEEEEEEEGGG---HHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS-EEHH
T ss_pred CeEeeCCCeEEEEEEEECCeEEEEEEEcHHH---HHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC-CCHH
Confidence 4799999999987777789999999986532 25678899999987 89999999999999999999999995 6999
Q ss_pred HHHhCCCCCCC--CCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCC-------------CCeEEeccc
Q 005226 492 NALRGRNGQPS--TSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDND-------------FQPYISDFG 556 (707)
Q Consensus 492 ~~l~~~~~~~~--~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~-------------~~~kl~DfG 556 (707)
+++........ ....+..++.|+.||+.||+|||+ .+|+||||||+|||++.+ +.+||+|||
T Consensus 97 ~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DFG 173 (434)
T 2rio_A 97 DLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFG 173 (434)
T ss_dssp HHHHTC------------CCHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCCT
T ss_pred HHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHH---CCccccCCChHhEEEecCcccccccccCCCceEEEEcccc
Confidence 99986542111 112344567899999999999999 899999999999999754 489999999
Q ss_pred ccccccccCCCCCCCCCCcCCCCCCCCccccccCccccCCCCCCC------CCCCCchhhHHHHHHHHHHHHh-CCCCCC
Q 005226 557 LSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVP------GNRPMQKWDVYSFGVVLLELLT-GKSPEL 629 (707)
Q Consensus 557 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~~DV~S~Gv~l~ellt-g~~P~~ 629 (707)
+++........... ......||+.|+|||++.. ...++.++|||||||++|||+| |+.||.
T Consensus 174 ~a~~~~~~~~~~~~------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~ 241 (434)
T 2rio_A 174 LCKKLDSGQSSFRT------------NLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFG 241 (434)
T ss_dssp TCEECCC--------------------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTC
T ss_pred cceecCCCCcccee------------eecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCC
Confidence 99876532211100 0123457999999998754 2568899999999999999999 999986
Q ss_pred CCCCCCCccchhHHHHHHhhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 005226 630 SPTTSTSIEVPDLVRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSE 700 (707)
Q Consensus 630 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~ 700 (707)
.... .............. .... .......++.+++.+||+.||.+|||+.+|++
T Consensus 242 ~~~~-------~~~~i~~~~~~~~~-~~~~---------~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 295 (434)
T 2rio_A 242 DKYS-------RESNIIRGIFSLDE-MKCL---------HDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295 (434)
T ss_dssp STTT-------HHHHHHHTCCCCCC-CTTC---------CCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred Cchh-------hHHHHhcCCCCccc-cccc---------ccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence 4321 11122222111111 0111 11234467889999999999999999999975
No 231
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=3.9e-37 Score=322.94 Aligned_cols=245 Identities=21% Similarity=0.288 Sum_probs=187.1
Q ss_pred ceecccCeeEEEEEEeCCCceEEEEEcCCC--chhhHHHHHHHHHHHHhcC--CCceeeeEEEEEcCCcceEEEEeecCC
Q 005226 413 YVLGKSGLGIVYKVVLGNGIPVAVRRLGEG--GEQRHREFVTEVQAIAKVK--HPNIVKLRAYYWAPDEKLLISDFISNG 488 (707)
Q Consensus 413 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~--H~niv~l~~~~~~~~~~~lV~e~~~~g 488 (707)
+.||+|+||.||++...+++.||||++... .....+.+.+|++++++++ ||||+++++++..++..++||| +.+|
T Consensus 34 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e-~~~~ 112 (313)
T 3cek_A 34 KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNI 112 (313)
T ss_dssp EEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEEEEC-CCSE
T ss_pred EEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEEEEe-cCCC
Confidence 479999999999999888999999998654 3344578999999999996 5999999999999999999999 5688
Q ss_pred ChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEecccccccccccCCCC
Q 005226 489 NLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNP 568 (707)
Q Consensus 489 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~ 568 (707)
+|.+++.... .+++..+..++.||+.||+|||+ .+|+||||||+||++++ +.+||+|||+++.........
T Consensus 113 ~L~~~l~~~~-----~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~~~~~~~~ 183 (313)
T 3cek_A 113 DLNSWLKKKK-----SIDPWERKSYWKNMLEAVHTIHQ---HGIVHSDLKPANFLIVD-GMLKLIDFGIANQMQPDTTSV 183 (313)
T ss_dssp EHHHHHHHCS-----SCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEET-TEEEECCCSSSCC--------
T ss_pred cHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCcccEEEEC-CeEEEeeccccccccCccccc
Confidence 9999998643 58999999999999999999999 89999999999999965 899999999998664322110
Q ss_pred CCCCCCcCCCCCCCCccccccCccccCCCCCCC----------CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCcc
Q 005226 569 SSSGGFMGGALPYMKPVQTEKTNNYRAPEARVP----------GNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIE 638 (707)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~----------~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~ 638 (707)
......|++.|+|||++.. ...++.++||||||+++|||++|+.||......
T Consensus 184 --------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~---- 245 (313)
T 3cek_A 184 --------------VKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ---- 245 (313)
T ss_dssp --------------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSH----
T ss_pred --------------cccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHH----
Confidence 0123457999999998653 146788999999999999999999999643211
Q ss_pred chhHHHHHHhhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 005226 639 VPDLVRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSE 700 (707)
Q Consensus 639 ~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~ 700 (707)
...+........... +.. .....+.+++.+||+.||++||++.++++
T Consensus 246 ~~~~~~~~~~~~~~~--~~~-------------~~~~~l~~li~~~l~~dp~~Rps~~ell~ 292 (313)
T 3cek_A 246 ISKLHAIIDPNHEIE--FPD-------------IPEKDLQDVLKCCLKRDPKQRISIPELLA 292 (313)
T ss_dssp HHHHHHHHCTTSCCC--CCC-------------CSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHHHHHHHhcccccC--Ccc-------------cchHHHHHHHHHHccCCcccCcCHHHHhc
Confidence 111111111111000 001 11245788999999999999999999986
No 232
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=5.3e-37 Score=330.08 Aligned_cols=260 Identities=20% Similarity=0.248 Sum_probs=190.9
Q ss_pred ceecccCeeEEEEEEe-CCCceEEEEEcCCCchhhHHHHHHHHHHHHhcC-----------CCceeeeEEEEEcCC----
Q 005226 413 YVLGKSGLGIVYKVVL-GNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVK-----------HPNIVKLRAYYWAPD---- 476 (707)
Q Consensus 413 ~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----------H~niv~l~~~~~~~~---- 476 (707)
+.||+|+||+||+|.. .+++.||||++..... ....+.+|++++++++ ||||+++++++...+
T Consensus 25 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 103 (373)
T 1q8y_A 25 RKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKV-YTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGV 103 (373)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEECSCHH-HHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEEETTEE
T ss_pred EeeeecCCeEEEEEEecCCCcEEEEEEecCCcc-chhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhccCCCCc
Confidence 4799999999999996 5789999999976433 3367889999999886 899999999998654
Q ss_pred cceEEEEeecCCChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCC-CceecCCCCCCeEEc------CCCC
Q 005226 477 EKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPR-KFVHGDIKPSNILLD------NDFQ 549 (707)
Q Consensus 477 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~-~iiHrDlk~~NIll~------~~~~ 549 (707)
..++||||+ +++|.+++.... ...+++..+..|+.||+.||+|||+ + +|+||||||+|||++ ..+.
T Consensus 104 ~~~lv~e~~-~~~L~~~~~~~~---~~~~~~~~~~~i~~qi~~aL~~lH~---~~~ivH~Dikp~NIll~~~~~~~~~~~ 176 (373)
T 1q8y_A 104 HVVMVFEVL-GENLLALIKKYE---HRGIPLIYVKQISKQLLLGLDYMHR---RCGIIHTDIKPENVLMEIVDSPENLIQ 176 (373)
T ss_dssp EEEEEECCC-CEEHHHHHHHTT---TSCCCHHHHHHHHHHHHHHHHHHHH---TTCEECSCCSGGGEEEEEEETTTTEEE
T ss_pred eEEEEEecC-CCCHHHHHHHhh---ccCCcHHHHHHHHHHHHHHHHHHHh---cCCEEecCCChHHeEEeccCCCcCcce
Confidence 678999999 899999998643 2358999999999999999999999 7 999999999999994 4457
Q ss_pred eEEecccccccccccCCCCCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCC
Q 005226 550 PYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPEL 629 (707)
Q Consensus 550 ~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~ 629 (707)
+||+|||+++...... ....||+.|+|||++.. ..++.++|||||||++|||+||+.||.
T Consensus 177 ~kl~Dfg~a~~~~~~~-------------------~~~~~t~~y~aPE~~~~-~~~~~~~Di~slG~il~el~~g~~pf~ 236 (373)
T 1q8y_A 177 IKIADLGNACWYDEHY-------------------TNSIQTREYRSPEVLLG-APWGCGADIWSTACLIFELITGDFLFE 236 (373)
T ss_dssp EEECCCTTCEETTBCC-------------------CSCCSCGGGCCHHHHHT-CCCCTHHHHHHHHHHHHHHHHSSCCC-
T ss_pred EEEcccccccccCCCC-------------------CCCCCCccccCcHHHhC-CCCCchHhHHHHHHHHHHHHhCCCCCC
Confidence 9999999998664221 12346899999999765 668999999999999999999999997
Q ss_pred CCCCCCCccchhHHHHHHhhccccC------------------CCchh-------chHHHH-hhhhhHHHHHHHHHHHHh
Q 005226 630 SPTTSTSIEVPDLVRWVKKGFEEEN------------------PLSDM-------VDAMLL-QEVHAKKEVIAVFHLALA 683 (707)
Q Consensus 630 ~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~-------~d~~l~-~~~~~~~~~~~l~~l~~~ 683 (707)
................+........ ....+ ....+. ...........+.+++.+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 316 (373)
T 1q8y_A 237 PDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSP 316 (373)
T ss_dssp --------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGG
T ss_pred CCcccccCChHHHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHH
Confidence 6443211111111111111111000 00000 000111 111224556788999999
Q ss_pred ccCCCCCCCCChHHHHH
Q 005226 684 CTEADPEVRPRMKNVSE 700 (707)
Q Consensus 684 Cl~~dP~~RPs~~~v~~ 700 (707)
||+.||++|||++|+++
T Consensus 317 ~L~~dP~~Rpt~~ell~ 333 (373)
T 1q8y_A 317 MLQLDPRKRADAGGLVN 333 (373)
T ss_dssp GGCSSTTTCBCHHHHHT
T ss_pred HhccCccccCCHHHHhh
Confidence 99999999999999986
No 233
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=1.1e-36 Score=328.88 Aligned_cols=193 Identities=25% Similarity=0.295 Sum_probs=162.1
Q ss_pred ceecccCeeEEEEEEeC-CCceEEEEEcCCCchhhHHHHHHHHHHHHhcC-CC-----ceeeeEEEEEcCCcceEEEEee
Q 005226 413 YVLGKSGLGIVYKVVLG-NGIPVAVRRLGEGGEQRHREFVTEVQAIAKVK-HP-----NIVKLRAYYWAPDEKLLISDFI 485 (707)
Q Consensus 413 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~-----niv~l~~~~~~~~~~~lV~e~~ 485 (707)
+.||+|+||+||+|... +++.||||+++.... ...++.+|+++++.++ |+ +|+++++++...+..++||||+
T Consensus 60 ~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~ 138 (382)
T 2vx3_A 60 SLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKA-FLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEML 138 (382)
T ss_dssp EEEEEETTEEEEEEEETTTTEEEEEEEECSSHH-HHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTEEEEEEECC
T ss_pred EEEeecCCEEEEEEEEcCCCcEEEEEEEeccHH-HHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCceEEEEecC
Confidence 48999999999999965 678999999975432 3467788999999884 55 4999999999999999999999
Q ss_pred cCCChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEc--CCCCeEEecccccccccc
Q 005226 486 SNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLD--NDFQPYISDFGLSRLINI 563 (707)
Q Consensus 486 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~--~~~~~kl~DfGla~~~~~ 563 (707)
+ |+|.+++.... ...+++..+..++.|++.||+|||+. ..+|+||||||+|||++ .++.+||+|||+++....
T Consensus 139 ~-~~L~~~l~~~~---~~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a~~~~~ 213 (382)
T 2vx3_A 139 S-YNLYDLLRNTN---FRGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQ 213 (382)
T ss_dssp C-CBHHHHHHHTT---TSCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEEECCCTTCEETTC
T ss_pred C-CCHHHHHhhcC---cCCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEEEEeccCceeccc
Confidence 6 59999998653 23589999999999999999999942 16899999999999995 478899999999986542
Q ss_pred cCCCCCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Q 005226 564 TGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSP 631 (707)
Q Consensus 564 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~ 631 (707)
.. ....||+.|+|||++.. ..++.++|||||||++|||+||+.||...
T Consensus 214 ~~-------------------~~~~~t~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltg~~pf~~~ 261 (382)
T 2vx3_A 214 RI-------------------YQYIQSRFYRSPEVLLG-MPYDLAIDMWSLGCILVEMHTGEPLFSGA 261 (382)
T ss_dssp CC-------------------CSSCSCGGGCCHHHHTT-CCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred cc-------------------ccccCCccccChHHHcC-CCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 11 12356889999999765 67899999999999999999999999753
No 234
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=7.7e-37 Score=318.60 Aligned_cols=259 Identities=19% Similarity=0.313 Sum_probs=186.1
Q ss_pred cceecccCeeEEEEEEeC-CCceEEEEEcCCCchhhHHHHHHHHHHHHhcCCCceeeeEEEEEcC-------------Cc
Q 005226 412 AYVLGKSGLGIVYKVVLG-NGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYYWAP-------------DE 477 (707)
Q Consensus 412 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~-------------~~ 477 (707)
.+.||+|+||.||+|... +++.||||++.... ...+.+.+|++++++++||||+++++++.+. +.
T Consensus 11 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (303)
T 1zy4_A 11 IAVLGQGAFGQVVKARNALDSRYYAIKKIRHTE-EKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKST 89 (303)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEEEH-HHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC------CEEE
T ss_pred hheeccCCcEEEEEEEEcCCCeEEEEEEEeccH-HHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcccccCCc
Confidence 357999999999999964 78999999986533 3347889999999999999999999998653 45
Q ss_pred ceEEEEeecCCChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEecccc
Q 005226 478 KLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGL 557 (707)
Q Consensus 478 ~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGl 557 (707)
.++||||+++|+|.+++.... ..+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+
T Consensus 90 ~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dlkp~Nil~~~~~~~kl~dfg~ 162 (303)
T 1zy4_A 90 LFIQMEYCENGTLYDLIHSEN----LNQQRDEYWRLFRQILEALSYIHS---QGIIHRDLKPMNIFIDESRNVKIGDFGL 162 (303)
T ss_dssp EEEEEECCCSCBHHHHHHHSC----GGGCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECCCCC
T ss_pred eEEEEecCCCCCHHHhhhccc----cccchHHHHHHHHHHHHHHHHHHh---CCeecccCCHHhEEEcCCCCEEEeeCcc
Confidence 689999999999999998543 357889999999999999999999 8999999999999999999999999999
Q ss_pred cccccccCCCCCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCc
Q 005226 558 SRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSI 637 (707)
Q Consensus 558 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~ 637 (707)
++.................+ .........|+..|+|||++.....++.++||||||+++|||++ ||... .
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~-----~ 232 (303)
T 1zy4_A 163 AKNVHRSLDILKLDSQNLPG--SSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTG-----M 232 (303)
T ss_dssp CSCTTC---------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSH-----H
T ss_pred hhhcccccchhccccccccc--cccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCc-----h
Confidence 98664321110000000000 00011234578999999997655578999999999999999998 54311 0
Q ss_pred cchhHHHHHHhhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 005226 638 EVPDLVRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSE 700 (707)
Q Consensus 638 ~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~ 700 (707)
+.......+... ...+... ........+.+++.+||+.||.+|||+.++++
T Consensus 233 ~~~~~~~~~~~~---~~~~~~~---------~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 283 (303)
T 1zy4_A 233 ERVNILKKLRSV---SIEFPPD---------FDDNKMKVEKKIIRLLIDHDPNKRPGARTLLN 283 (303)
T ss_dssp HHHHHHHHHHST---TCCCCTT---------CCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred hHHHHHHhcccc---ccccCcc---------ccccchHHHHHHHHHHHhcCcccCcCHHHHhC
Confidence 111122222111 1000000 01122345789999999999999999999986
No 235
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=7.7e-37 Score=316.56 Aligned_cols=244 Identities=27% Similarity=0.353 Sum_probs=193.4
Q ss_pred cceecccCeeEEEEEEeC-CCceEEEEEcCCCc--hhhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCcceEEEEeecCC
Q 005226 412 AYVLGKSGLGIVYKVVLG-NGIPVAVRRLGEGG--EQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNG 488 (707)
Q Consensus 412 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~g 488 (707)
.+.||+|+||.||+|... +++.||+|++.... ......+.+|++++++++||||+++++++...+..++|+||++++
T Consensus 27 ~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 106 (287)
T 2wei_A 27 VCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGG 106 (287)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred eEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEEEEccCCC
Confidence 358999999999999975 78899999986542 234578899999999999999999999999999999999999999
Q ss_pred ChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCC---CCeEEecccccccccccC
Q 005226 489 NLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDND---FQPYISDFGLSRLINITG 565 (707)
Q Consensus 489 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~---~~~kl~DfGla~~~~~~~ 565 (707)
+|.+++.... .+++..+..++.||+.||+|||+ .+|+||||||+||+++.+ +.+||+|||+++......
T Consensus 107 ~L~~~l~~~~-----~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~~ 178 (287)
T 2wei_A 107 ELFDEIIKRK-----RFSEHDAARIIKQVFSGITYMHK---HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT 178 (287)
T ss_dssp BHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCCCS
T ss_pred CHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCChhhEEEecCCCcccEEEeccCcceeecCCC
Confidence 9999987543 58999999999999999999999 899999999999999754 479999999998654221
Q ss_pred CCCCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchhHHHH
Q 005226 566 NNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVRW 645 (707)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~ 645 (707)
.. ....++..|+|||.+.. .++.++||||||+++|||++|+.||.... .......
T Consensus 179 ~~-----------------~~~~~~~~y~aPE~~~~--~~~~~~Di~slG~~l~~l~~g~~p~~~~~------~~~~~~~ 233 (287)
T 2wei_A 179 KM-----------------KDRIGTAYYIAPEVLRG--TYDEKCDVWSAGVILYILLSGTPPFYGKN------EYDILKR 233 (287)
T ss_dssp SC-----------------SCHHHHHTTCCHHHHTT--CCCTHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHH
T ss_pred cc-----------------ccccCcccccChHHhcC--CCCCchhhHhHHHHHHHHHhCCCCCCCCC------HHHHHHH
Confidence 10 12346889999998653 47899999999999999999999996532 1122222
Q ss_pred HHhhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 005226 646 VKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSE 700 (707)
Q Consensus 646 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~ 700 (707)
+......... . ........+.+++.+|++.||++|||+.++++
T Consensus 234 ~~~~~~~~~~-~-----------~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 276 (287)
T 2wei_A 234 VETGKYAFDL-P-----------QWRTISDDAKDLIRKMLTFHPSLRITATQCLE 276 (287)
T ss_dssp HHHCCCCCCS-G-----------GGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHcCCCCCCc-h-----------hhhhcCHHHHHHHHHHcccChhhCcCHHHHhc
Confidence 2221110000 0 00112345789999999999999999999987
No 236
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=9.1e-37 Score=325.89 Aligned_cols=252 Identities=22% Similarity=0.265 Sum_probs=188.8
Q ss_pred ceecccCeeEEEEEEeC-CCceEEEEEcCCCc--hhhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCc------ceEEEE
Q 005226 413 YVLGKSGLGIVYKVVLG-NGIPVAVRRLGEGG--EQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDE------KLLISD 483 (707)
Q Consensus 413 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~------~~lV~e 483 (707)
+.||+|+||.||+|... +|+.||||++.... ....+.+.+|+.++++++||||+++++++...+. .++|||
T Consensus 30 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e 109 (353)
T 3coi_A 30 THVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMP 109 (353)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCEEEEE
T ss_pred eeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccceeEEEEec
Confidence 47999999999999964 68999999987642 2334678999999999999999999999987754 499999
Q ss_pred eecCCChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEecccccccccc
Q 005226 484 FISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINI 563 (707)
Q Consensus 484 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~ 563 (707)
|+. |+|.+++.. .+++..+..++.||+.||+|||+ .+|+||||||+||+++.++.+||+|||+++....
T Consensus 110 ~~~-~~l~~~~~~-------~~~~~~~~~i~~qi~~al~~LH~---~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~ 178 (353)
T 3coi_A 110 FMQ-TDLQKIMGL-------KFSEEKIQYLVYQMLKGLKYIHS---AGVVHRDLKPGNLAVNEDCELKILDFGLARHADA 178 (353)
T ss_dssp CCS-EEGGGTTTS-------CCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCCGGGEEECTTCCEEECSTTCTTC---
T ss_pred ccc-CCHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEeECCCCcEEEeecccccCCCC
Confidence 997 688888752 38999999999999999999999 8999999999999999999999999999875432
Q ss_pred cCCCCCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchhHH
Q 005226 564 TGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLV 643 (707)
Q Consensus 564 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~~ 643 (707)
.. ....+|+.|+|||++.....++.++||||||+++|||++|+.||..... .+..
T Consensus 179 ~~-------------------~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~------~~~~ 233 (353)
T 3coi_A 179 EM-------------------TGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDY------LDQL 233 (353)
T ss_dssp ------------------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCH------HHHH
T ss_pred Cc-------------------cccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH------HHHH
Confidence 11 1234688999999877656788999999999999999999999975321 1111
Q ss_pred HHHHhhccccCC--CchhchHH---HHhh----------hhhHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 005226 644 RWVKKGFEEENP--LSDMVDAM---LLQE----------VHAKKEVIAVFHLALACTEADPEVRPRMKNVSE 700 (707)
Q Consensus 644 ~~~~~~~~~~~~--~~~~~d~~---l~~~----------~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~ 700 (707)
..+......... ...+.+.. .... .........+.+++.+|++.||++|||++++++
T Consensus 234 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~ 305 (353)
T 3coi_A 234 TQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT 305 (353)
T ss_dssp HHHHHHHCBCCHHHHTTCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred HHHHHHhCCCCHHHHHHHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 111111100000 00000000 0000 000123456889999999999999999999975
No 237
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=4.1e-37 Score=327.77 Aligned_cols=259 Identities=17% Similarity=0.190 Sum_probs=196.3
Q ss_pred ceecccCeeEEEEEEeCCCceEEEEEcCCCchhh-----------------HHHHHHHHHHHHhcCCCceeeeEEEEEcC
Q 005226 413 YVLGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQR-----------------HREFVTEVQAIAKVKHPNIVKLRAYYWAP 475 (707)
Q Consensus 413 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~-----------------~~~~~~E~~~l~~l~H~niv~l~~~~~~~ 475 (707)
+.||+|+||.||+|.. ++..||||++....... .+.|.+|++++++++||||+++++++.+.
T Consensus 37 ~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 115 (348)
T 2pml_X 37 RTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCEGIITNY 115 (348)
T ss_dssp EEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCCSEEEESS
T ss_pred EEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceEEEEEeeC
Confidence 4799999999999999 99999999986542211 17899999999999999999999999999
Q ss_pred CcceEEEEeecCCChHHH------HhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCC
Q 005226 476 DEKLLISDFISNGNLANA------LRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQ 549 (707)
Q Consensus 476 ~~~~lV~e~~~~gsL~~~------l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~ 549 (707)
+..++||||+++|+|.++ +.... ...+++..+..++.||+.||+|||+. .+|+||||||+||+++.++.
T Consensus 116 ~~~~lv~e~~~~~~L~~~~~~~~~l~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~--~~i~H~dl~p~Nil~~~~~~ 190 (348)
T 2pml_X 116 DEVYIIYEYMENDSILKFDEYFFVLDKNY---TCFIPIQVIKCIIKSVLNSFSYIHNE--KNICHRDVKPSNILMDKNGR 190 (348)
T ss_dssp SEEEEEEECCTTCBSSEESSSEESSCSSS---CCCCCHHHHHHHHHHHHHHHHHHHHT--SCEECCCCCGGGEEECTTSC
T ss_pred CeEEEEEeccCCCcHHHHHHHhhhhhhcc---ccCCCHHHHHHHHHHHHHHHHHHhcc--CCEeecCCChHhEEEcCCCc
Confidence 999999999999999999 54321 34699999999999999999999972 59999999999999999999
Q ss_pred eEEecccccccccccCCCCCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCc-hhhHHHHHHHHHHHHhCCCCC
Q 005226 550 PYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQ-KWDVYSFGVVLLELLTGKSPE 628 (707)
Q Consensus 550 ~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~~DV~S~Gv~l~elltg~~P~ 628 (707)
+||+|||+++...... .....|+..|+|||.+.....++. ++||||||+++|||++|+.||
T Consensus 191 ~kl~dfg~~~~~~~~~------------------~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf 252 (348)
T 2pml_X 191 VKLSDFGESEYMVDKK------------------IKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPF 252 (348)
T ss_dssp EEECCCTTCEECBTTE------------------ECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSS
T ss_pred EEEecccccccccccc------------------ccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCC
Confidence 9999999998654221 022356899999999776435555 999999999999999999999
Q ss_pred CCCCCCCCccchhHHHHHHhhccccCC-CchhchHHHH--hhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 005226 629 LSPTTSTSIEVPDLVRWVKKGFEEENP-LSDMVDAMLL--QEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSE 700 (707)
Q Consensus 629 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~d~~l~--~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~ 700 (707)
...... ..+...+......... ......+... ...........+.+++.+||+.||.+||++.++++
T Consensus 253 ~~~~~~-----~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~ 322 (348)
T 2pml_X 253 SLKISL-----VELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK 322 (348)
T ss_dssp CCSSCS-----HHHHHHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred CCCCcH-----HHHHHHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 754321 2333333222111000 0000000000 00000223356789999999999999999999986
No 238
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=4.7e-37 Score=325.65 Aligned_cols=245 Identities=22% Similarity=0.293 Sum_probs=166.5
Q ss_pred cceecccCeeEEEEEEeC-CCceEEEEEcCCCchhhHHHHHHHHH-HHHhcCCCceeeeEEEEEc----CCcceEEEEee
Q 005226 412 AYVLGKSGLGIVYKVVLG-NGIPVAVRRLGEGGEQRHREFVTEVQ-AIAKVKHPNIVKLRAYYWA----PDEKLLISDFI 485 (707)
Q Consensus 412 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~-~l~~l~H~niv~l~~~~~~----~~~~~lV~e~~ 485 (707)
.++||+|+||+||+|... +++.||||++.... ...+|+. .++.++||||+++++++.. +...++||||+
T Consensus 34 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~ 108 (336)
T 3fhr_A 34 KQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP-----KARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIMECM 108 (336)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEESSH-----HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECC
T ss_pred ceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH-----HHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEEEEEecc
Confidence 347999999999999976 68999999986542 2223333 3566799999999999976 34578999999
Q ss_pred cCCChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcC---CCCeEEeccccccccc
Q 005226 486 SNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDN---DFQPYISDFGLSRLIN 562 (707)
Q Consensus 486 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~---~~~~kl~DfGla~~~~ 562 (707)
++|+|.+++.... ...+++.++..++.||+.||+|||+ ++|+||||||+||+++. ++.+||+|||+++...
T Consensus 109 ~gg~L~~~l~~~~---~~~l~~~~~~~i~~ql~~~l~~LH~---~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~~ 182 (336)
T 3fhr_A 109 EGGELFSRIQERG---DQAFTEREAAEIMRDIGTAIQFLHS---HNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETT 182 (336)
T ss_dssp TTEEHHHHHHTC----CCCCBHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCSSTTCCEEECCCTTCEEC-
T ss_pred CCCCHHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEEecCCCceEEEeccccceecc
Confidence 9999999998654 2369999999999999999999999 89999999999999976 4559999999997654
Q ss_pred ccCCCCCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchhH
Q 005226 563 ITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDL 642 (707)
Q Consensus 563 ~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~ 642 (707)
.... ....+|+.|+|||++.. ..++.++||||||+++|||++|+.||.......... ..
T Consensus 183 ~~~~------------------~~~~~t~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~--~~ 241 (336)
T 3fhr_A 183 QNAL------------------QTPCYTPYYVAPEVLGP-EKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISP--GM 241 (336)
T ss_dssp ----------------------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC--------------
T ss_pred cccc------------------ccCCCCcCccChhhhCC-CCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhh--hH
Confidence 2111 22346899999999654 677889999999999999999999997543321000 00
Q ss_pred HHHHHhhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 005226 643 VRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSE 700 (707)
Q Consensus 643 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~ 700 (707)
...+... ... ... .........+.+++.+||+.||++|||++++++
T Consensus 242 ~~~~~~~---~~~---~~~------~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 287 (336)
T 3fhr_A 242 KRRIRLG---QYG---FPN------PEWSEVSEDAKQLIRLLLKTDPTERLTITQFMN 287 (336)
T ss_dssp ------------C---CCT------TTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred HHhhhcc---ccc---cCc------hhhccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 0000000 000 000 000122346789999999999999999999987
No 239
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=8.2e-37 Score=322.29 Aligned_cols=257 Identities=23% Similarity=0.282 Sum_probs=189.8
Q ss_pred ceecccCeeEEEEEEe--CCCceEEEEEcCCCc--hhhHHHHHHHHHHHHhc---CCCceeeeEEEEE-----cCCcceE
Q 005226 413 YVLGKSGLGIVYKVVL--GNGIPVAVRRLGEGG--EQRHREFVTEVQAIAKV---KHPNIVKLRAYYW-----APDEKLL 480 (707)
Q Consensus 413 ~~lG~G~~g~Vy~~~~--~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l---~H~niv~l~~~~~-----~~~~~~l 480 (707)
+.||+|+||.||+|.. .+++.||+|++.... ......+.+|+.+++.+ +||||+++++++. .....++
T Consensus 17 ~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~~l 96 (326)
T 1blx_A 17 AEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTL 96 (326)
T ss_dssp EEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSSEEEEEE
T ss_pred eeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccCCCceEEE
Confidence 4799999999999997 467899999886432 12224567888887776 8999999999997 4566799
Q ss_pred EEEeecCCChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEeccccccc
Q 005226 481 ISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRL 560 (707)
Q Consensus 481 V~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~ 560 (707)
||||+. |+|.+++.... ...+++..+..++.||+.||+|||+ .+|+||||||+||+++.++.+||+|||+++.
T Consensus 97 v~e~~~-~~L~~~l~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~---~gi~H~dlkp~Nili~~~~~~kl~Dfg~~~~ 169 (326)
T 1blx_A 97 VFEHVD-QDLTTYLDKVP---EPGVPTETIKDMMFQLLRGLDFLHS---HRVVHRDLKPQNILVTSSGQIKLADFGLARI 169 (326)
T ss_dssp EEECCS-CBHHHHHHHSC---TTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECSCCSCCC
T ss_pred EEecCC-CCHHHHHHhcc---cCCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCCHHHeEEcCCCCEEEecCccccc
Confidence 999997 69999998653 2358999999999999999999999 8999999999999999999999999999976
Q ss_pred ccccCCCCCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccch
Q 005226 561 INITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVP 640 (707)
Q Consensus 561 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~ 640 (707)
...... .....||..|+|||++.. ..++.++||||||+++|||++|+.||..... .
T Consensus 170 ~~~~~~-----------------~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~g~~pf~~~~~------~ 225 (326)
T 1blx_A 170 YSFQMA-----------------LTSVVVTLWYRAPEVLLQ-SSYATPVDLWSVGCIFAEMFRRKPLFRGSSD------V 225 (326)
T ss_dssp CCGGGG-----------------GCCCCCCCTTCCHHHHTT-CCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH------H
T ss_pred ccCCCC-----------------ccccccccceeCHHHHhc-CCCCcchhHHHHHHHHHHHHcCCCCCCCCCH------H
Confidence 542211 122356889999999765 6688999999999999999999999975321 1
Q ss_pred hHHHHHHhhcc----ccCCCc-hhchHHHH------hhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 005226 641 DLVRWVKKGFE----EENPLS-DMVDAMLL------QEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSE 700 (707)
Q Consensus 641 ~~~~~~~~~~~----~~~~~~-~~~d~~l~------~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~ 700 (707)
+....+..... ..++.. ......+. ...........+.+++.+||+.||++||++.++++
T Consensus 226 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 296 (326)
T 1blx_A 226 DQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 296 (326)
T ss_dssp HHHHHHHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred HHHHHHHHHcCCCCcccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 12222211110 000000 00000000 00001122356789999999999999999999984
No 240
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=2.7e-37 Score=326.26 Aligned_cols=252 Identities=22% Similarity=0.317 Sum_probs=173.5
Q ss_pred cceecccCeeEEEEEEeC-CCceEEEEEcCCCc-hhhHHHHHHHHH-HHHhcCCCceeeeEEEEEcCCcceEEEEeecCC
Q 005226 412 AYVLGKSGLGIVYKVVLG-NGIPVAVRRLGEGG-EQRHREFVTEVQ-AIAKVKHPNIVKLRAYYWAPDEKLLISDFISNG 488 (707)
Q Consensus 412 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~-~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~g 488 (707)
.+.||+|+||.||+|... +|+.||||++.... .....++..|+. +++.++||||+++++++..++..++||||+++
T Consensus 27 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~e~~~~- 105 (327)
T 3aln_A 27 LGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELMST- 105 (327)
T ss_dssp -CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEECCCSE-
T ss_pred hheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEEeecCC-
Confidence 347999999999999974 78999999987653 333456666776 67778999999999999999999999999975
Q ss_pred ChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCC-CceecCCCCCCeEEcCCCCeEEecccccccccccCCC
Q 005226 489 NLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPR-KFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNN 567 (707)
Q Consensus 489 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~-~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~~~ 567 (707)
+|.+++..........+++..+..++.|++.||+|||+ . +|+||||||+||+++.++.+||+|||+++........
T Consensus 106 ~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~ 182 (327)
T 3aln_A 106 SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKE---NLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAK 182 (327)
T ss_dssp EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHH---HHSCCCSCCCGGGEEEETTTEEEECCCSSSCC-------
T ss_pred ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhc---cCCEeECCCCHHHEEEcCCCCEEEccCCCceeccccccc
Confidence 88888763111112468999999999999999999999 7 9999999999999999999999999999765422110
Q ss_pred CCCCCCCcCCCCCCCCccccccCccccCCCCCC---CCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchhHHH
Q 005226 568 PSSSGGFMGGALPYMKPVQTEKTNNYRAPEARV---PGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVR 644 (707)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~ 644 (707)
....||..|+|||++. .+..++.++||||||+++|||++|+.||...... .+
T Consensus 183 -----------------~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--------~~ 237 (327)
T 3aln_A 183 -----------------TRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSV--------FD 237 (327)
T ss_dssp ----------------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-------------
T ss_pred -----------------ccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchH--------HH
Confidence 2235689999999973 3356789999999999999999999999653211 01
Q ss_pred HHHhhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 005226 645 WVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSE 700 (707)
Q Consensus 645 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~ 700 (707)
..........+ .... .........+.+++.+||+.||++||++.++++
T Consensus 238 ~~~~~~~~~~~--~~~~------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 285 (327)
T 3aln_A 238 QLTQVVKGDPP--QLSN------SEEREFSPSFINFVNLCLTKDESKRPKYKELLK 285 (327)
T ss_dssp --CCCCCSCCC--CCCC------CSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred HHHHHhcCCCC--CCCC------cccccCCHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence 11111111100 0000 000112346789999999999999999999975
No 241
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=1.8e-36 Score=323.48 Aligned_cols=252 Identities=22% Similarity=0.293 Sum_probs=191.1
Q ss_pred ceecccCeeEEEEEEeC-CC-ceEEEEEcCCCchhhHHHHHHHHHHHHhcCCCc------eeeeEEEEEcCCcceEEEEe
Q 005226 413 YVLGKSGLGIVYKVVLG-NG-IPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPN------IVKLRAYYWAPDEKLLISDF 484 (707)
Q Consensus 413 ~~lG~G~~g~Vy~~~~~-~~-~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~n------iv~l~~~~~~~~~~~lV~e~ 484 (707)
+.||+|+||+||+|... ++ ..||+|+++.... ..+.+.+|++++++++|++ ++.+++++...+..++||||
T Consensus 25 ~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~ 103 (355)
T 2eu9_A 25 GNLGEGTFGKVVECLDHARGKSQVALKIIRNVGK-YREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFEL 103 (355)
T ss_dssp EEEEEETTEEEEEEEETTTTTEEEEEEEECSCHH-HHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTEEEEEEEC
T ss_pred EEeeccCCeEEEEEEecCCCceEEEEEEEccccc-chhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCeEEEEEec
Confidence 47999999999999964 34 6899999976533 3467889999999998776 99999999999999999999
Q ss_pred ecCCChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEE-------------------c
Q 005226 485 ISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILL-------------------D 545 (707)
Q Consensus 485 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll-------------------~ 545 (707)
+ +|+|.+++.... ...+++..+..|+.||+.||+|||+ ++|+||||||+|||+ +
T Consensus 104 ~-~~~l~~~l~~~~---~~~~~~~~~~~i~~qi~~~L~~lH~---~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~~ 176 (355)
T 2eu9_A 104 L-GKNTFEFLKENN---FQPYPLPHVRHMAYQLCHALRFLHE---NQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSV 176 (355)
T ss_dssp C-CCBHHHHHHHTT---TCCCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEESCCCEEEEECCC-CCCEEEE
T ss_pred c-CCChHHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEeccccccccccccccccccc
Confidence 9 678888876543 2358999999999999999999999 899999999999999 6
Q ss_pred CCCCeEEecccccccccccCCCCCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCC
Q 005226 546 NDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGK 625 (707)
Q Consensus 546 ~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~ 625 (707)
.++.+||+|||+++...... ....||+.|+|||++.. ..++.++|||||||++|||++|+
T Consensus 177 ~~~~~kl~Dfg~~~~~~~~~-------------------~~~~gt~~y~aPE~~~~-~~~~~~~Di~slG~il~el~~g~ 236 (355)
T 2eu9_A 177 KNTSIRVADFGSATFDHEHH-------------------TTIVATRHYRPPEVILE-LGWAQPCDVWSIGCILFEYYRGF 236 (355)
T ss_dssp SCCCEEECCCTTCEETTSCC-------------------CSSCSCGGGCCHHHHTT-CCCCTHHHHHHHHHHHHHHHHSS
T ss_pred CCCcEEEeecCccccccccc-------------------cCCcCCCcccCCeeeec-CCCCCccchHHHHHHHHHHHhCC
Confidence 67899999999997643211 22356999999999765 67899999999999999999999
Q ss_pred CCCCCCCCCCCccchhHHHHHHhhccccCCCchh---------------------chHH-HHh--------hhhhHHHHH
Q 005226 626 SPELSPTTSTSIEVPDLVRWVKKGFEEENPLSDM---------------------VDAM-LLQ--------EVHAKKEVI 675 (707)
Q Consensus 626 ~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~d~~-l~~--------~~~~~~~~~ 675 (707)
.||..... ......+....... + ..+ .+.. ... .........
T Consensus 237 ~pf~~~~~------~~~~~~~~~~~~~~-p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (355)
T 2eu9_A 237 TLFQTHEN------REHLVMMEKILGPI-P-SHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHV 308 (355)
T ss_dssp CSCCCSSH------HHHHHHHHHHHCCC-C-HHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHH
T ss_pred CCCCCCCH------HHHHHHHHHHcCCC-c-HHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHH
Confidence 99975322 11111111111100 0 000 0000 000 001122345
Q ss_pred HHHHHHHhccCCCCCCCCChHHHHH
Q 005226 676 AVFHLALACTEADPEVRPRMKNVSE 700 (707)
Q Consensus 676 ~l~~l~~~Cl~~dP~~RPs~~~v~~ 700 (707)
.+.+++.+||+.||++|||+.|+++
T Consensus 309 ~l~~li~~~L~~dP~~Rpt~~e~l~ 333 (355)
T 2eu9_A 309 QLFDLMRRMLEFDPAQRITLAEALL 333 (355)
T ss_dssp HHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred HHHHHHHHHhcCChhhCcCHHHHhc
Confidence 7889999999999999999999974
No 242
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.8e-37 Score=323.93 Aligned_cols=235 Identities=21% Similarity=0.300 Sum_probs=184.1
Q ss_pred cceecccCeeEEEEEEe-CCCceEEEEEcCCCch------hhHHHHHHHHHHHHhc----CCCceeeeEEEEEcCCcceE
Q 005226 412 AYVLGKSGLGIVYKVVL-GNGIPVAVRRLGEGGE------QRHREFVTEVQAIAKV----KHPNIVKLRAYYWAPDEKLL 480 (707)
Q Consensus 412 ~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l----~H~niv~l~~~~~~~~~~~l 480 (707)
.+.||+|+||.||+|.. .+++.||||++..... .....+.+|+.++.++ +||||+++++++...+..++
T Consensus 36 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~~~~~~~~ 115 (312)
T 2iwi_A 36 GPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFETQEGFML 115 (312)
T ss_dssp EEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC-----CEE
T ss_pred eeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEEecCCeEEE
Confidence 34899999999999986 4788999999976532 1224566799999999 89999999999999999999
Q ss_pred EEEe-ecCCChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEc-CCCCeEEeccccc
Q 005226 481 ISDF-ISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLD-NDFQPYISDFGLS 558 (707)
Q Consensus 481 V~e~-~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~-~~~~~kl~DfGla 558 (707)
|+|| +++++|.+++.... .+++..+..++.||+.||+|||+ .+|+||||||+||+++ .++.+||+|||++
T Consensus 116 v~e~~~~~~~L~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~kl~dfg~~ 187 (312)
T 2iwi_A 116 VLERPLPAQDLFDYITEKG-----PLGEGPSRCFFGQVVAAIQHCHS---RGVVHRDIKDENILIDLRRGCAKLIDFGSG 187 (312)
T ss_dssp EEECCSSEEEHHHHHHHHC-----SCCHHHHHHHHHHHHHHHHHHHH---HTEECCCCSGGGEEEETTTTEEEECCCSSC
T ss_pred EEEecCCCCCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCChhhEEEeCCCCeEEEEEcchh
Confidence 9999 78999999998643 58999999999999999999999 7999999999999999 8899999999999
Q ss_pred ccccccCCCCCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCcc
Q 005226 559 RLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIE 638 (707)
Q Consensus 559 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~ 638 (707)
+....... ....|+..|+|||++......+.++||||||+++|||++|+.||...
T Consensus 188 ~~~~~~~~------------------~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~------- 242 (312)
T 2iwi_A 188 ALLHDEPY------------------TDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERD------- 242 (312)
T ss_dssp EECCSSCB------------------CCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSH-------
T ss_pred hhcccCcc------------------cccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCCh-------
Confidence 87643211 22346889999998765444456999999999999999999998531
Q ss_pred chhHHHHHHhhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 005226 639 VPDLVRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSE 700 (707)
Q Consensus 639 ~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~ 700 (707)
. +.... ...+. ......+.+++.+||+.||++||++.++++
T Consensus 243 -~---~~~~~----~~~~~-------------~~~~~~~~~li~~~l~~~p~~Rps~~e~l~ 283 (312)
T 2iwi_A 243 -Q---EILEA----ELHFP-------------AHVSPDCCALIRRCLAPKPSSRPSLEEILL 283 (312)
T ss_dssp -H---HHHHT----CCCCC-------------TTSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred -H---HHhhh----ccCCc-------------ccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0 11111 00000 112235678999999999999999999986
No 243
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=2.2e-37 Score=326.00 Aligned_cols=234 Identities=22% Similarity=0.317 Sum_probs=188.6
Q ss_pred ceecccCeeEEEEEEe-CCCceEEEEEcCCCchh------hHHHHHHHHHHHHhcC--CCceeeeEEEEEcCCcceEEEE
Q 005226 413 YVLGKSGLGIVYKVVL-GNGIPVAVRRLGEGGEQ------RHREFVTEVQAIAKVK--HPNIVKLRAYYWAPDEKLLISD 483 (707)
Q Consensus 413 ~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~--H~niv~l~~~~~~~~~~~lV~e 483 (707)
+.||+|+||.||+|.. .+++.||||++...... ....+.+|+.++++++ ||||+++++++..++..++|+|
T Consensus 49 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~~~~~lv~e 128 (320)
T 3a99_A 49 PLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE 128 (320)
T ss_dssp EECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSEEEEEEE
T ss_pred EEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecCCcEEEEEE
Confidence 4899999999999985 47899999998654221 2245778999999996 5999999999999999999999
Q ss_pred eecC-CChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEc-CCCCeEEecccccccc
Q 005226 484 FISN-GNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLD-NDFQPYISDFGLSRLI 561 (707)
Q Consensus 484 ~~~~-gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~-~~~~~kl~DfGla~~~ 561 (707)
|+.+ ++|.+++.... .+++..+..++.||+.||+|||+ .+|+||||||+||+++ +++.+||+|||+++..
T Consensus 129 ~~~~~~~L~~~l~~~~-----~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~~kL~Dfg~~~~~ 200 (320)
T 3a99_A 129 RPEPVQDLFDFITERG-----ALQEELARSFFWQVLEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALL 200 (320)
T ss_dssp CCSSEEEHHHHHHHHC-----SCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred cCCCCccHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHH---CCcEeCCCCHHHEEEeCCCCCEEEeeCcccccc
Confidence 9976 89999997643 58999999999999999999999 8999999999999999 7899999999999866
Q ss_pred cccCCCCCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchh
Q 005226 562 NITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPD 641 (707)
Q Consensus 562 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~ 641 (707)
..... ....||+.|+|||++......+.++||||||+++|||++|+.||....
T Consensus 201 ~~~~~------------------~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~--------- 253 (320)
T 3a99_A 201 KDTVY------------------TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE--------- 253 (320)
T ss_dssp CSSCB------------------CCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH---------
T ss_pred ccccc------------------cCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChh---------
Confidence 42211 123468999999987654455789999999999999999999985310
Q ss_pred HHHHHHhhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 005226 642 LVRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSE 700 (707)
Q Consensus 642 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~ 700 (707)
+.... ...+. .....++.+++.+||+.||++||+++++++
T Consensus 254 --~~~~~----~~~~~-------------~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 293 (320)
T 3a99_A 254 --EIIRG----QVFFR-------------QRVSSECQHLIRWCLALRPSDRPTFEEIQN 293 (320)
T ss_dssp --HHHHC----CCCCS-------------SCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred --hhhcc----ccccc-------------ccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 11111 00001 111245679999999999999999999986
No 244
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=2.8e-36 Score=330.03 Aligned_cols=245 Identities=23% Similarity=0.291 Sum_probs=180.3
Q ss_pred ceecccCeeEEEEEEeCCCceEEEEEcCCCchhhHHHHHHHHHHHHhc-CCCceeeeEEEEEcCCcceEEEEeecCCChH
Q 005226 413 YVLGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKV-KHPNIVKLRAYYWAPDEKLLISDFISNGNLA 491 (707)
Q Consensus 413 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lV~e~~~~gsL~ 491 (707)
++||+|+||+||.....+++.||||++..... ..+.+|+++++++ +|||||++++++.+.+..++||||+. |+|.
T Consensus 30 ~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~---~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~-g~L~ 105 (432)
T 3p23_A 30 DVLGHGAEGTIVYRGMFDNRDVAVKRILPECF---SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCA-ATLQ 105 (432)
T ss_dssp EEEEECGGGCEEEEEESSSSEEEEEEECTTTE---EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECCS-EEHH
T ss_pred CeeecCcCEEEEEEEEeCCeEEEEEEECHHHH---HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECCC-CCHH
Confidence 48999999997665566899999999865432 3356899999999 89999999999999999999999996 6999
Q ss_pred HHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcC-----CCCeEEecccccccccccCC
Q 005226 492 NALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDN-----DFQPYISDFGLSRLINITGN 566 (707)
Q Consensus 492 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~-----~~~~kl~DfGla~~~~~~~~ 566 (707)
+++..... .+.+..+..++.||+.||+|||+ .+|+||||||+|||++. ...+||+|||+|+.......
T Consensus 106 ~~l~~~~~----~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~~ 178 (432)
T 3p23_A 106 EYVEQKDF----AHLGLEPITLLQQTTSGLAHLHS---LNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRH 178 (432)
T ss_dssp HHHHSSSC----CCCSSCHHHHHHHHHHHHHHHHH---TTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC-----
T ss_pred HHHHhcCC----CccchhHHHHHHHHHHHHHHHHH---CcCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCCCc
Confidence 99986542 24445567899999999999999 89999999999999943 34688999999987653221
Q ss_pred CCCCCCCCcCCCCCCCCccccccCccccCCCCCCC--CCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCCCccchhHH
Q 005226 567 NPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVP--GNRPMQKWDVYSFGVVLLELLT-GKSPELSPTTSTSIEVPDLV 643 (707)
Q Consensus 567 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~~DV~S~Gv~l~ellt-g~~P~~~~~~~~~~~~~~~~ 643 (707)
... ......||+.|+|||++.. ...++.++|||||||++|||+| |+.||..... ...
T Consensus 179 ~~~-------------~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~-------~~~ 238 (432)
T 3p23_A 179 SFS-------------RRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQ-------RQA 238 (432)
T ss_dssp --------------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTT-------HHH
T ss_pred cee-------------eccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhH-------HHH
Confidence 100 1123457999999999764 3566789999999999999999 8989853211 111
Q ss_pred HHHHhhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 005226 644 RWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSE 700 (707)
Q Consensus 644 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~ 700 (707)
......... .... ........+.+++.+||+.||++|||+.+|++
T Consensus 239 ~~~~~~~~~-----~~~~-------~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~ 283 (432)
T 3p23_A 239 NILLGACSL-----DCLH-------PEKHEDVIARELIEKMIAMDPQKRPSAKHVLK 283 (432)
T ss_dssp HHHTTCCCC-----TTSC-------TTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHHhccCCc-----cccC-------ccccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence 111111000 0000 01122345678999999999999999999984
No 245
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=4.9e-36 Score=315.12 Aligned_cols=246 Identities=22% Similarity=0.270 Sum_probs=172.7
Q ss_pred cceecccCeeEEEEEEeC-CCceEEEEEcCCCch--hhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCcceEEEEeecCC
Q 005226 412 AYVLGKSGLGIVYKVVLG-NGIPVAVRRLGEGGE--QRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNG 488 (707)
Q Consensus 412 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~g 488 (707)
.+.||+|+||.||+|... +|+.||||++..... ...+.+..+..+++.++||||+++++++..++..++||||+ ++
T Consensus 30 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~-~~ 108 (318)
T 2dyl_A 30 LGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELM-GT 108 (318)
T ss_dssp EEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCC-SE
T ss_pred cceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEEecc-CC
Confidence 457999999999999975 789999999876532 22234445555688889999999999999999999999999 55
Q ss_pred ChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCC-CceecCCCCCCeEEcCCCCeEEecccccccccccCCC
Q 005226 489 NLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPR-KFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNN 567 (707)
Q Consensus 489 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~-~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~~~ 567 (707)
.+..+..... ..+++..+..++.|++.||+|||+ + +|+||||||+||+++.++.+||+|||+++........
T Consensus 109 ~~~~l~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~---~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~ 181 (318)
T 2dyl_A 109 CAEKLKKRMQ----GPIPERILGKMTVAIVKALYYLKE---KHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAK 181 (318)
T ss_dssp EHHHHHHHHT----SCCCHHHHHHHHHHHHHHHHHHHH---HHCCCCCCCCGGGEEECTTSCEEECCCTTC---------
T ss_pred cHHHHHHHhc----cCCCHHHHHHHHHHHHHHHHHHHh---hCCEEeCCCCHHHEEECCCCCEEEEECCCchhccCCccc
Confidence 5555554322 358999999999999999999998 5 8999999999999999999999999998765422111
Q ss_pred CCCCCCCcCCCCCCCCccccccCccccCCCCCC----CCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchhHH
Q 005226 568 PSSSGGFMGGALPYMKPVQTEKTNNYRAPEARV----PGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLV 643 (707)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~----~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~~ 643 (707)
....+++.|+|||++. ....++.++||||||+++|||++|+.||..... .....
T Consensus 182 -----------------~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-----~~~~~ 239 (318)
T 2dyl_A 182 -----------------DRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKT-----DFEVL 239 (318)
T ss_dssp ----------------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCS-----HHHHH
T ss_pred -----------------cccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCc-----cHHHH
Confidence 2234689999999974 235678999999999999999999999964221 11111
Q ss_pred HHHHhhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 005226 644 RWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSE 700 (707)
Q Consensus 644 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~ 700 (707)
...........+ ........+.+++.+||+.||.+||++.++++
T Consensus 240 ~~~~~~~~~~~~-------------~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (318)
T 2dyl_A 240 TKVLQEEPPLLP-------------GHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLE 283 (318)
T ss_dssp HHHHHSCCCCCC-------------SSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred HHHhccCCCCCC-------------ccCCCCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 111111111100 00012245779999999999999999999875
No 246
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=2e-35 Score=305.57 Aligned_cols=224 Identities=12% Similarity=0.129 Sum_probs=176.9
Q ss_pred ceecccCeeEEEEEEeC-CCceEEEEEcCCCc---hhhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCcceEEEEeecCC
Q 005226 413 YVLGKSGLGIVYKVVLG-NGIPVAVRRLGEGG---EQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISDFISNG 488 (707)
Q Consensus 413 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~g 488 (707)
+.||+|+||.||+|... +++.||||++.... ....+.|.+|+.++++++||||+++++++..++..|+||||++++
T Consensus 37 ~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~g~ 116 (286)
T 3uqc_A 37 IFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVAEWIRGG 116 (286)
T ss_dssp EEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCCEE
T ss_pred EEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEEEecCCC
Confidence 37999999999999975 58999999997653 233478999999999999999999999999999999999999999
Q ss_pred ChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEecccccccccccCCCC
Q 005226 489 NLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNP 568 (707)
Q Consensus 489 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~ 568 (707)
+|.+++... ....++.+|+.|++.||+|||+ ++|+||||||+||+++.++.+||+++|
T Consensus 117 ~L~~~l~~~-------~~~~~~~~i~~ql~~aL~~lH~---~givH~Dikp~NIll~~~g~~kl~~~~------------ 174 (286)
T 3uqc_A 117 SLQEVADTS-------PSPVGAIRAMQSLAAAADAAHR---AGVALSIDHPSRVRVSIDGDVVLAYPA------------ 174 (286)
T ss_dssp EHHHHHTTC-------CCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEEETTSCEEECSCC------------
T ss_pred CHHHHHhcC-------CChHHHHHHHHHHHHHHHHHHH---CCCccCCCCcccEEEcCCCCEEEEecc------------
Confidence 999999532 3555788999999999999999 899999999999999999999998543
Q ss_pred CCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchhHHHHHHh
Q 005226 569 SSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVRWVKK 648 (707)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~ 648 (707)
|++ .++.++|||||||++|||+||+.||............ ..
T Consensus 175 ------------------------~~~--------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~------~~ 216 (286)
T 3uqc_A 175 ------------------------TMP--------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPA------ER 216 (286)
T ss_dssp ------------------------CCT--------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEEC------CB
T ss_pred ------------------------ccC--------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHH------HH
Confidence 222 2478999999999999999999999865432111000 00
Q ss_pred hccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHHhhc
Q 005226 649 GFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSENLERIG 706 (707)
Q Consensus 649 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~~L~~i~ 706 (707)
.... ......- ........+.+++.+||+.||++| |+.++++.|+++.
T Consensus 217 ~~~~-----~~~~~~~----~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~ 264 (286)
T 3uqc_A 217 DTAG-----QPIEPAD----IDRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQAT 264 (286)
T ss_dssp CTTS-----CBCCHHH----HCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHH
T ss_pred Hhcc-----CCCChhh----cccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHh
Confidence 0000 0000000 011223457899999999999999 9999999998864
No 247
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=6e-36 Score=337.71 Aligned_cols=255 Identities=24% Similarity=0.303 Sum_probs=189.5
Q ss_pred cceecccCeeEEEEEEe-CCCceEEEEEcCCC-chhhHHHHHHHHHHHHhcCCCceeeeEEEEEc------CCcceEEEE
Q 005226 412 AYVLGKSGLGIVYKVVL-GNGIPVAVRRLGEG-GEQRHREFVTEVQAIAKVKHPNIVKLRAYYWA------PDEKLLISD 483 (707)
Q Consensus 412 ~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~------~~~~~lV~e 483 (707)
.+.||+|+||.||+|.. .+|..||||++... .....+.|.+|++++++++||||+++++++.. ++..++|||
T Consensus 19 ~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~~LVmE 98 (676)
T 3qa8_A 19 KERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAME 98 (676)
T ss_dssp CCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSCCCEEE
T ss_pred EEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeEEEEEE
Confidence 34899999999999996 46899999998764 33445779999999999999999999999765 667799999
Q ss_pred eecCCChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCC---eEEeccccccc
Q 005226 484 FISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQ---PYISDFGLSRL 560 (707)
Q Consensus 484 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~---~kl~DfGla~~ 560 (707)
|+++|+|.+++..... ...+++..+..|+.|++.||+|||+ .+|+||||||+||+++.++. +||+|||+++.
T Consensus 99 y~~ggsL~~~L~~~~~--~~~lse~~i~~I~~QLl~aL~yLHs---~gIVHrDLKP~NILl~~~g~~~~vKL~DFG~a~~ 173 (676)
T 3qa8_A 99 YCEGGDLRKYLNQFEN--CCGLKEGPIRTLLSDISSALRYLHE---NRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKE 173 (676)
T ss_dssp CCSSCBHHHHHHSSSC--TTCCCSSHHHHHHHHHHHHHHHHHH---TTBCCCCCCSTTEEEECCSSSCEEEECSCCCCCB
T ss_pred eCCCCCHHHHHHhccc--CCCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCCHHHeEeecCCCceeEEEcccccccc
Confidence 9999999999986542 2358899999999999999999999 89999999999999997765 99999999986
Q ss_pred ccccCCCCCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccch
Q 005226 561 INITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVP 640 (707)
Q Consensus 561 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~ 640 (707)
....... ....||..|+|||++.. ..++.++||||||+++|||++|+.||....
T Consensus 174 ~~~~~~~-----------------~~~~gt~~Y~APE~l~~-~~~s~ksDIwSLGviLyeLltG~~Pf~~~~-------- 227 (676)
T 3qa8_A 174 LDQGELC-----------------TEFVGTLQYLAPELLEQ-KKYTVTVDYWSFGTLAFECITGFRPFLPNW-------- 227 (676)
T ss_dssp TTSCCCC-----------------CCCCSCCTTCSSCSSCC-SCCSTTHHHHHHHHHHHHHHSSCSSCCSSC--------
T ss_pred ccccccc-----------------ccccCCcccCChHHhcc-CCCCchhHHHHHHHHHHHHHHCCCCCCccc--------
Confidence 6432211 22356899999999764 778999999999999999999999996421
Q ss_pred hHHHHHHhhccccCC---Cchhch------HHHH-hhhhhHHHHHHHHHHHHhccCCCCCCCCChHH
Q 005226 641 DLVRWVKKGFEEENP---LSDMVD------AMLL-QEVHAKKEVIAVFHLALACTEADPEVRPRMKN 697 (707)
Q Consensus 641 ~~~~~~~~~~~~~~~---~~~~~d------~~l~-~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~ 697 (707)
....|.......... ..+... ..+. ...........+.+++.+|+..||++|||+++
T Consensus 228 ~~~~~~~~i~~~~~~~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~e 294 (676)
T 3qa8_A 228 QPVQWHGKVREKSNEHIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQ 294 (676)
T ss_dssp HHHHSSTTCC------CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTT
T ss_pred chhhhhhhhhcccchhhhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHH
Confidence 111111110000000 000000 0000 00011234567889999999999999999987
No 248
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=2.5e-35 Score=341.63 Aligned_cols=231 Identities=24% Similarity=0.331 Sum_probs=183.5
Q ss_pred ceecccCeeEEEEEEeC--CCceEEEEEcCCCc-hhhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCc-----ceEEEEe
Q 005226 413 YVLGKSGLGIVYKVVLG--NGIPVAVRRLGEGG-EQRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDE-----KLLISDF 484 (707)
Q Consensus 413 ~~lG~G~~g~Vy~~~~~--~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~-----~~lV~e~ 484 (707)
+.||+|+||+||+|... +++.||||++.... ......|.+|++++++++||||+++++++...+. .|+||||
T Consensus 86 ~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~~lv~E~ 165 (681)
T 2pzi_A 86 GCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVGYIVMEY 165 (681)
T ss_dssp EEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEEEEEEEC
T ss_pred EEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCceeEEEEEe
Confidence 47999999999999975 68999999987543 3445678999999999999999999999988766 6999999
Q ss_pred ecCCChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEeccccccccccc
Q 005226 485 ISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINIT 564 (707)
Q Consensus 485 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~~ 564 (707)
+++++|.+++.. .++|.+++.|+.||+.||+|||+ ++||||||||+|||++.+ .+||+|||+++.....
T Consensus 166 ~~g~~L~~~~~~-------~l~~~~~~~~~~qi~~aL~~lH~---~giiHrDlkp~NIll~~~-~~kl~DFG~a~~~~~~ 234 (681)
T 2pzi_A 166 VGGQSLKRSKGQ-------KLPVAEAIAYLLEILPALSYLHS---IGLVYNDLKPENIMLTEE-QLKLIDLGAVSRINSF 234 (681)
T ss_dssp CCCEECC----C-------CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECSS-CEEECCCTTCEETTCC
T ss_pred CCCCcHHHHHhC-------CCCHHHHHHHHHHHHHHHHHHHH---CCCeecccChHHeEEeCC-cEEEEecccchhcccC
Confidence 999999987753 48999999999999999999999 899999999999999986 8999999999865421
Q ss_pred CCCCCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchhHHH
Q 005226 565 GNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVR 644 (707)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~ 644 (707)
....||+.|+|||++.. .++.++|||||||++|||++|..||.......
T Consensus 235 --------------------~~~~gt~~y~aPE~~~~--~~~~~sDi~slG~~l~~l~~g~~~~~~~~~~~--------- 283 (681)
T 2pzi_A 235 --------------------GYLYGTPGFQAPEIVRT--GPTVATDIYTVGRTLAALTLDLPTRNGRYVDG--------- 283 (681)
T ss_dssp --------------------SCCCCCTTTSCTTHHHH--CSCHHHHHHHHHHHHHHHHSCCCEETTEECSS---------
T ss_pred --------------------CccCCCccccCHHHHcC--CCCCceehhhhHHHHHHHHhCCCCCccccccc---------
Confidence 12346999999998654 34889999999999999999998876421110
Q ss_pred HHHhhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCC-hHHHHHHHHh
Q 005226 645 WVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPR-MKNVSENLER 704 (707)
Q Consensus 645 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs-~~~v~~~L~~ 704 (707)
.... .+ .......+.+++.+||+.||++||+ ++++...|..
T Consensus 284 -----~~~~-------~~-------~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~ 325 (681)
T 2pzi_A 284 -----LPED-------DP-------VLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTG 325 (681)
T ss_dssp -----CCTT-------CH-------HHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred -----cccc-------cc-------ccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHH
Confidence 0000 00 0112245789999999999999995 5666666554
No 249
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=9.2e-35 Score=302.87 Aligned_cols=224 Identities=21% Similarity=0.290 Sum_probs=173.0
Q ss_pred ceecccCeeEEEEEEe-CCCceEEEEEcCCCchhhHHHHHHHHHHH-HhcCCCceeeeEEEEEc----CCcceEEEEeec
Q 005226 413 YVLGKSGLGIVYKVVL-GNGIPVAVRRLGEGGEQRHREFVTEVQAI-AKVKHPNIVKLRAYYWA----PDEKLLISDFIS 486 (707)
Q Consensus 413 ~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l-~~l~H~niv~l~~~~~~----~~~~~lV~e~~~ 486 (707)
++||+|+||.||+|.. .+++.||+|++... ..+.+|++++ +..+||||+++++++.. ....++||||++
T Consensus 24 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~ 98 (299)
T 3m2w_A 24 QVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLD 98 (299)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEECCCC
T ss_pred cccccCCCeEEEEEEEcCCCcEEEEEEeccc-----HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEEEEEeecC
Confidence 4799999999999996 47899999998653 4567899988 45599999999999977 567899999999
Q ss_pred CCChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcC---CCCeEEecccccccccc
Q 005226 487 NGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDN---DFQPYISDFGLSRLINI 563 (707)
Q Consensus 487 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~---~~~~kl~DfGla~~~~~ 563 (707)
+|+|.+++.... ...+++..+..++.|++.||+|||+ .+|+||||||+||+++. ++.+||+|||++....
T Consensus 99 ~~~L~~~l~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~- 171 (299)
T 3m2w_A 99 GGELFSRIQDRG---DQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT- 171 (299)
T ss_dssp SCBHHHHHHHCT---TCCCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECT-
T ss_pred CCcHHHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEEecCCCCCcEEEeccccccccc-
Confidence 999999998653 2369999999999999999999999 89999999999999998 7899999999886432
Q ss_pred cCCCCCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCCCccchhHH
Q 005226 564 TGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPELSPTTSTSIEVPDLV 643 (707)
Q Consensus 564 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~~ 643 (707)
+..++.++|||||||++|||+||+.||...........
T Consensus 172 --------------------------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~---- 209 (299)
T 3m2w_A 172 --------------------------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPG---- 209 (299)
T ss_dssp --------------------------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------CC----
T ss_pred --------------------------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHH----
Confidence 13456899999999999999999999965432110000
Q ss_pred HHHHhhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 005226 644 RWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVSE 700 (707)
Q Consensus 644 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~~ 700 (707)
......... .....+. .......+.+++.+||+.||++|||+.|+++
T Consensus 210 --~~~~~~~~~--~~~~~~~------~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~ 256 (299)
T 3m2w_A 210 --MKTRIRMGQ--YEFPNPE------WSEVSEEVKMLIRNLLKTEPTQRMTITEFMN 256 (299)
T ss_dssp --SCCSSCTTC--CSSCHHH------HTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred --HHHHHhhcc--ccCCchh------cccCCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 000000000 0000000 0122356789999999999999999999986
No 250
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=5.2e-35 Score=318.63 Aligned_cols=238 Identities=16% Similarity=0.105 Sum_probs=172.0
Q ss_pred ceecccCeeEEEEEEe-CCCceEEEEEcCCCch---hhHHHHHHHHHHHHhcCC-Ccee---------eeE---------
Q 005226 413 YVLGKSGLGIVYKVVL-GNGIPVAVRRLGEGGE---QRHREFVTEVQAIAKVKH-PNIV---------KLR--------- 469 (707)
Q Consensus 413 ~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H-~niv---------~l~--------- 469 (707)
++||+|+||+||+|.. .+|+.||||++..... ...+.|.+|+.+++.++| +|.. ...
T Consensus 84 ~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (413)
T 3dzo_A 84 TVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQKK 163 (413)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEEECCC--
T ss_pred cccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhcccCCCC
Confidence 4899999999999995 4789999999874322 234789999999999977 3211 111
Q ss_pred ---EEEEc-----CCcceEEEEeecCCChHHHHhCCC--CCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCC
Q 005226 470 ---AYYWA-----PDEKLLISDFISNGNLANALRGRN--GQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKP 539 (707)
Q Consensus 470 ---~~~~~-----~~~~~lV~e~~~~gsL~~~l~~~~--~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~ 539 (707)
.++.. ....+++|+++ +|+|.+++.... ......+++..++.|+.||+.||+|||+ ++||||||||
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~iiHrDiKp 239 (413)
T 3dzo_A 164 KMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHH---YGLVHTYLRP 239 (413)
T ss_dssp -------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHH---TTEECSCCCG
T ss_pred ccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCccc
Confidence 11111 11335666654 789999984210 0112358899999999999999999999 8999999999
Q ss_pred CCeEEcCCCCeEEecccccccccccCCCCCCCCCCcCCCCCCCCccccccCccccCCCCCC---------CCCCCCchhh
Q 005226 540 SNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARV---------PGNRPMQKWD 610 (707)
Q Consensus 540 ~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---------~~~~~~~~~D 610 (707)
+|||++.++.+||+|||+++...... ....| +.|+|||++. ....++.++|
T Consensus 240 ~NILl~~~~~~kL~DFG~a~~~~~~~-------------------~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~D 299 (413)
T 3dzo_A 240 VDIVLDQRGGVFLTGFEHLVRDGASA-------------------VSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFD 299 (413)
T ss_dssp GGEEECTTCCEEECCGGGCEETTEEE-------------------CCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHH
T ss_pred ceEEEecCCeEEEEeccceeecCCcc-------------------ccCCC-CceeCchhhhccccccccccCcCCCchhh
Confidence 99999999999999999988654321 22345 8899999872 3356788999
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCCCccchhHHHHHHhhccccCCCchhchHHHHhhhhhHHHHHHHHHHHHhccCCCCC
Q 005226 611 VYSFGVVLLELLTGKSPELSPTTSTSIEVPDLVRWVKKGFEEENPLSDMVDAMLLQEVHAKKEVIAVFHLALACTEADPE 690 (707)
Q Consensus 611 V~S~Gv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~ 690 (707)
||||||++|||+||+.||......... ...+... ......+.+++.+||+.||+
T Consensus 300 vwSlGvil~elltg~~Pf~~~~~~~~~---------~~~~~~~-----------------~~~~~~~~~li~~~l~~dP~ 353 (413)
T 3dzo_A 300 TWTLGLAIYWIWCADLPNTDDAALGGS---------EWIFRSC-----------------KNIPQPVRALLEGFLRYPKE 353 (413)
T ss_dssp HHHHHHHHHHHHHSSCCCCTTGGGSCS---------GGGGSSC-----------------CCCCHHHHHHHHHHTCSSGG
T ss_pred HHHHHHHHHHHHHCCCCCCCcchhhhH---------HHHHhhc-----------------ccCCHHHHHHHHHHccCChh
Confidence 999999999999999999753321100 0000000 01124578999999999999
Q ss_pred CCCChHHHHH
Q 005226 691 VRPRMKNVSE 700 (707)
Q Consensus 691 ~RPs~~~v~~ 700 (707)
+||++.++++
T Consensus 354 ~Rpt~~~~l~ 363 (413)
T 3dzo_A 354 DRLLPLQAME 363 (413)
T ss_dssp GSCCHHHHTT
T ss_pred hCcCHHHHHh
Confidence 9999877754
No 251
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=2.3e-34 Score=305.00 Aligned_cols=237 Identities=16% Similarity=0.149 Sum_probs=176.5
Q ss_pred ccceecccCeeEEEEEEeCCCceEEEEEcCCCc--------hhhHHHHHHHHHHHHhcC---------CCceeeeEEEEE
Q 005226 411 SAYVLGKSGLGIVYKVVLGNGIPVAVRRLGEGG--------EQRHREFVTEVQAIAKVK---------HPNIVKLRAYYW 473 (707)
Q Consensus 411 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~---------H~niv~l~~~~~ 473 (707)
..+.||+|+||+||+|+. +|+.||||++.... ....+.+.+|++++++++ |||||++.+.+.
T Consensus 24 ~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~~~~~ 102 (336)
T 2vuw_A 24 RCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLNSVHC 102 (336)
T ss_dssp TCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEEEEEE
T ss_pred heeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhhcceeE
Confidence 345899999999999998 78999999987542 223377899999999986 777777777643
Q ss_pred ------------------------------cCCcceEEEEeecCCChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q 005226 474 ------------------------------APDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAY 523 (707)
Q Consensus 474 ------------------------------~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~y 523 (707)
..+..++||||+++|++.+.+.. ..+++..+..|+.||+.||+|
T Consensus 103 ~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~------~~~~~~~~~~i~~qi~~aL~~ 176 (336)
T 2vuw_A 103 VQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT------KLSSLATAKSILHQLTASLAV 176 (336)
T ss_dssp EESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT------TCCCHHHHHHHHHHHHHHHHH
T ss_pred ecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh------cCCCHHHHHHHHHHHHHHHHH
Confidence 26788999999999987777753 248999999999999999999
Q ss_pred Hh-hcCCCCceecCCCCCCeEEcCCC--------------------CeEEecccccccccccCCCCCCCCCCcCCCCCCC
Q 005226 524 LH-ECSPRKFVHGDIKPSNILLDNDF--------------------QPYISDFGLSRLINITGNNPSSSGGFMGGALPYM 582 (707)
Q Consensus 524 LH-~~~~~~iiHrDlk~~NIll~~~~--------------------~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~ 582 (707)
|| + .+|+||||||+|||++.++ .+||+|||+|+....
T Consensus 177 lH~~---~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~------------------- 234 (336)
T 2vuw_A 177 AEAS---LRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERD------------------- 234 (336)
T ss_dssp HHHH---HCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEET-------------------
T ss_pred HHHh---CCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCC-------------------
Confidence 99 8 7999999999999999887 899999999986642
Q ss_pred CccccccCccccCCCCCCCCCCCCchhhHHHHHHH-HHHHHhCCCCCCCCCCCCCccchhHHHHHHhhccccCCCchhch
Q 005226 583 KPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVV-LLELLTGKSPELSPTTSTSIEVPDLVRWVKKGFEEENPLSDMVD 661 (707)
Q Consensus 583 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~-l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 661 (707)
....||+.|+|||++.+ .. +.++||||++++ .+++++|..||.... ......+.+......... ..
T Consensus 235 --~~~~gt~~y~aPE~~~g-~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~~-----~~~~~~~~~~~~~~~~~~----~~ 301 (336)
T 2vuw_A 235 --GIVVFCDVSMDEDLFTG-DG-DYQFDIYRLMKKENNNRWGEYHPYSNVL-----WLHYLTDKMLKQMTFKTK----CN 301 (336)
T ss_dssp --TEEECCCCTTCSGGGCC-CS-SHHHHHHHHHHHHHTTCTTSCCTHHHHH-----HHHHHHHHHHHTCCCSSC----CC
T ss_pred --CcEEEeecccChhhhcC-CC-ccceehhhhhCCCCcccccccCCCcchh-----hhhHHHHhhhhhhccCcc----cc
Confidence 12357999999999764 33 889999998777 778888998873100 000011111111010000 00
Q ss_pred HHHHhhhhhHHHHHHHHHHHHhccCCCCCCCCChHHHH
Q 005226 662 AMLLQEVHAKKEVIAVFHLALACTEADPEVRPRMKNVS 699 (707)
Q Consensus 662 ~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v~ 699 (707)
. ........++.+|+.+||+.| |++|++
T Consensus 302 ~-----~~~~~~s~~~~dli~~~L~~d-----sa~e~l 329 (336)
T 2vuw_A 302 T-----PAMKQIKRKIQEFHRTMLNFS-----SATDLL 329 (336)
T ss_dssp S-----HHHHHHHHHHHHHHHHGGGSS-----SHHHHH
T ss_pred h-----hhhhhcCHHHHHHHHHHhccC-----CHHHHH
Confidence 0 012344567899999999976 898887
No 252
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.98 E-value=7e-33 Score=292.25 Aligned_cols=254 Identities=20% Similarity=0.261 Sum_probs=224.5
Q ss_pred hcCCcccHHHHHHHHhcCcCCCCCCCCCCC---CCCCCCceeceeEeCCCC----CCCCCcEEEEEcCCCCccccCCCCc
Q 005226 17 CFALSPDGLTLLSLKSAIDQTDTSVFADWN---ENDPTPCRWSGISCMNIT----GFPDPRVVGVAISGKNVRGYIPSEL 89 (707)
Q Consensus 17 ~~~~~~d~~~l~~~k~~~~~~~~~~~~~W~---~~~~~~C~w~gv~c~~~~----~~~~~~v~~L~L~~n~l~~~~~~~l 89 (707)
+.+..+|..||++||..+..|+.+.+++|. ...+++|.|.|+.|...+ .....+|+.|+|++|+++ .+|..+
T Consensus 22 ~~~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~-~lp~~l 100 (328)
T 4fcg_A 22 STALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIETRTGRALKATADLLEDATQPGRVALELRSVPLP-QFPDQA 100 (328)
T ss_dssp -CCCCCHHHHHHHHHHHHHHCCTTHHHHHHHHTTTCTTSCCSHHHHHHHHHHHHHHHTSTTCCEEEEESSCCS-SCCSCG
T ss_pred cccCchHHHHHHHHHHhccCCchhhhhhhcccccccccccccCCcchhhhHHHHhcccccceeEEEccCCCch-hcChhh
Confidence 346788999999999999778888899995 445678999999995211 011268999999999999 778899
Q ss_pred CCCCCCCEEEcccCCcCCCCCccccCCCCCceEEecCccCCCCCCcccCCCCCccEEeccCCcccccCCCCCcc------
Q 005226 90 GSLIYLRRLNLHNNNLFGSLPDQLFNATSLHSIFLYGNNLSGSLPPSVCNLPRLQNLDLSNNSFSGSLPDGLKN------ 163 (707)
Q Consensus 90 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~------ 163 (707)
+++++|++|+|++|.|+ .+|..+.++++|++|+|++|+|+ .+|..|.++++|+.|+|++|++.+.+|..+..
T Consensus 101 ~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~ 178 (328)
T 4fcg_A 101 FRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASGE 178 (328)
T ss_dssp GGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCC
T ss_pred hhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccchhh
Confidence 99999999999999999 89999999999999999999999 88999999999999999999999999998765
Q ss_pred ---cchhhhhhhcCCcccccCCCcccccCCCccEEeccCCCCCCCCCcchhhhhccccEEEeccCcCcCCCCCcCCCCCC
Q 005226 164 ---CKQLQRLILARNKFSGQIPAGIWPELENLVQLDLSDNDFKGPIPNDLGELQSLSATLNLSYNHLSGKIPKSLGNLPV 240 (707)
Q Consensus 164 ---l~~L~~L~l~~N~l~~~lp~~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~L~l~~N~l~~~~p~~~~~l~~ 240 (707)
+++|+.|+|++|+|+ .+|.. +..+++|++|+|++|+++ .+|..+..+++| ++|+|++|.+.+.+|..+..+++
T Consensus 179 ~~~l~~L~~L~L~~n~l~-~lp~~-l~~l~~L~~L~L~~N~l~-~l~~~l~~l~~L-~~L~Ls~n~~~~~~p~~~~~l~~ 254 (328)
T 4fcg_A 179 HQGLVNLQSLRLEWTGIR-SLPAS-IANLQNLKSLKIRNSPLS-ALGPAIHHLPKL-EELDLRGCTALRNYPPIFGGRAP 254 (328)
T ss_dssp EEESTTCCEEEEEEECCC-CCCGG-GGGCTTCCEEEEESSCCC-CCCGGGGGCTTC-CEEECTTCTTCCBCCCCTTCCCC
T ss_pred hccCCCCCEEECcCCCcC-cchHh-hcCCCCCCEEEccCCCCC-cCchhhccCCCC-CEEECcCCcchhhhHHHhcCCCC
Confidence 999999999999999 99987 479999999999999999 477789999999 89999999999999999999999
Q ss_pred ccEEEccCCcCcccCCC-CCCCCCCCCcccCCCCcccC
Q 005226 241 TVSFDLRGNNLSGEIPQ-TGSFANQGPTAFLSNPLLCG 277 (707)
Q Consensus 241 L~~l~l~~N~l~~~~p~-~~~~~~~~~~~~~~N~~l~~ 277 (707)
|+.|++++|++.+.+|. ...+.++..+.+.+|+.+..
T Consensus 255 L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~ 292 (328)
T 4fcg_A 255 LKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSR 292 (328)
T ss_dssp CCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCC
T ss_pred CCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhh
Confidence 99999999999999984 34566677788888776543
No 253
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.97 E-value=6.7e-32 Score=317.43 Aligned_cols=242 Identities=28% Similarity=0.435 Sum_probs=200.4
Q ss_pred cCCcccHHHHHHHHhcCcCCCCCCCCCCCCCCCCCceeceeEeCCCCCCCCCcEEEEEcCCCCcccc---CC--------
Q 005226 18 FALSPDGLTLLSLKSAIDQTDTSVFADWNENDPTPCRWSGISCMNITGFPDPRVVGVAISGKNVRGY---IP-------- 86 (707)
Q Consensus 18 ~~~~~d~~~l~~~k~~~~~~~~~~~~~W~~~~~~~C~w~gv~c~~~~~~~~~~v~~L~L~~n~l~~~---~~-------- 86 (707)
++.++|+.||++||+++. ||. .+++|+.+ .+||+|.||+|+. ++|+.|+|+++++.|. +|
T Consensus 8 ~~~~~~~~all~~k~~~~-~~~-~l~~W~~~-~~~C~w~gv~C~~------~~v~~L~L~~~~l~g~~~~l~~~l~~L~~ 78 (768)
T 3rgz_A 8 QSLYREIHQLISFKDVLP-DKN-LLPDWSSN-KNPCTFDGVTCRD------DKVTSIDLSSKPLNVGFSAVSSSLLSLTG 78 (768)
T ss_dssp CCHHHHHHHHHHHHTTCS-CTT-SSTTCCTT-SCGGGSTTEEEET------TEEEEEECTTSCCCEEHHHHHHHTTTCTT
T ss_pred cCCHHHHHHHHHHHhhCC-Ccc-cccCCCCC-CCCcCCcceEECC------CcEEEEECCCCCcCCccCccChhHhccCc
Confidence 456789999999999998 777 99999854 4799999999982 7999999999999886 33
Q ss_pred ---------------CCcCCCCCCCEEEcccCCcCCCCCc--cccCCCCCceEEecCccCCCCCCccc-CCCCCccEEec
Q 005226 87 ---------------SELGSLIYLRRLNLHNNNLFGSLPD--QLFNATSLHSIFLYGNNLSGSLPPSV-CNLPRLQNLDL 148 (707)
Q Consensus 87 ---------------~~l~~l~~L~~L~L~~N~l~~~~p~--~~~~l~~L~~L~L~~N~l~~~~p~~~-~~l~~L~~L~L 148 (707)
..|+++++|++|+|++|.++|.+|. .+.++++|++|||++|.+++.+|..+ .++++|++|+|
T Consensus 79 L~~l~~~~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L 158 (768)
T 3rgz_A 79 LESLFLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDL 158 (768)
T ss_dssp CCEEECTTSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEEC
T ss_pred ccccCCcCCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEEC
Confidence 5788888899999999988888888 88888999999999998888888766 78888888888
Q ss_pred cCCcccccCCCC---CcccchhhhhhhcCCcccccCCCcccccCCCccEEeccCCCCCCCCCcchhhhhccccEEEeccC
Q 005226 149 SNNSFSGSLPDG---LKNCKQLQRLILARNKFSGQIPAGIWPELENLVQLDLSDNDFKGPIPNDLGELQSLSATLNLSYN 225 (707)
Q Consensus 149 s~N~l~~~~p~~---~~~l~~L~~L~l~~N~l~~~lp~~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~L~l~~N 225 (707)
++|++++..|.. +.++++|++|+|++|++++.+|. ..+++|++|+|++|++++.+|. ++++++| ++|+|++|
T Consensus 159 s~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~---~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L-~~L~Ls~n 233 (768)
T 3rgz_A 159 SANSISGANVVGWVLSDGCGELKHLAISGNKISGDVDV---SRCVNLEFLDVSSNNFSTGIPF-LGDCSAL-QHLDISGN 233 (768)
T ss_dssp CSSCCEEETHHHHHHTTCCTTCCEEECCSSEEESCCBC---TTCTTCCEEECCSSCCCSCCCB-CTTCCSC-CEEECCSS
T ss_pred CCCccCCcCChhhhhhccCCCCCEEECCCCcccccCCc---ccCCcCCEEECcCCcCCCCCcc-cccCCCC-CEEECcCC
Confidence 888888777766 77888888888888888765554 5778888888888888877776 8888888 78888888
Q ss_pred cCcCCCCCcCCCCCCccEEEccCCcCcccCCCCCCCCCCCCcccCCCCc
Q 005226 226 HLSGKIPKSLGNLPVTVSFDLRGNNLSGEIPQTGSFANQGPTAFLSNPL 274 (707)
Q Consensus 226 ~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~~~~~~~~~~~~N~~ 274 (707)
++++.+|..+..+++|+.|++++|++++.+|.. .+.++..+.+.+|..
T Consensus 234 ~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~-~l~~L~~L~L~~n~l 281 (768)
T 3rgz_A 234 KLSGDFSRAISTCTELKLLNISSNQFVGPIPPL-PLKSLQYLSLAENKF 281 (768)
T ss_dssp CCCSCHHHHTTTCSSCCEEECCSSCCEESCCCC-CCTTCCEEECCSSEE
T ss_pred cCCCcccHHHhcCCCCCEEECCCCcccCccCcc-ccCCCCEEECcCCcc
Confidence 888888888888888888888888888877765 566677777766653
No 254
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.97 E-value=1.9e-31 Score=313.60 Aligned_cols=215 Identities=35% Similarity=0.621 Sum_probs=180.9
Q ss_pred CcEEEEEcCCCCccccCCCCcCCCCCCCEEEcccCCcCCCCCccccCCCCCceEEecCccCCCCCCcccCCCCCccEEec
Q 005226 69 PRVVGVAISGKNVRGYIPSELGSLIYLRRLNLHNNNLFGSLPDQLFNATSLHSIFLYGNNLSGSLPPSVCNLPRLQNLDL 148 (707)
Q Consensus 69 ~~v~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 148 (707)
.+++.|+|++|++++.+|..|.++++|++|+|++|++++.+|..+.++++|++|+|++|++++.+|..++.+++|+.|+|
T Consensus 466 ~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L 545 (768)
T 3rgz_A 466 KTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDL 545 (768)
T ss_dssp TTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEEC
T ss_pred CCceEEEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEEC
Confidence 46777777777777777777777777777777777777777777777777777777777777777777777777777777
Q ss_pred cCCcccccCCCCC-------------------------------------------------------------------
Q 005226 149 SNNSFSGSLPDGL------------------------------------------------------------------- 161 (707)
Q Consensus 149 s~N~l~~~~p~~~------------------------------------------------------------------- 161 (707)
++|+++|.+|..+
T Consensus 546 s~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~ 625 (768)
T 3rgz_A 546 NTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTS 625 (768)
T ss_dssp CSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECC
T ss_pred CCCccCCcCChHHhcccchhhhhccccccccccccccccccccccccccccccccchhhhccccccccccccceecccCc
Confidence 7777776666433
Q ss_pred ---cccchhhhhhhcCCcccccCCCcccccCCCccEEeccCCCCCCCCCcchhhhhccccEEEeccCcCcCCCCCcCCCC
Q 005226 162 ---KNCKQLQRLILARNKFSGQIPAGIWPELENLVQLDLSDNDFKGPIPNDLGELQSLSATLNLSYNHLSGKIPKSLGNL 238 (707)
Q Consensus 162 ---~~l~~L~~L~l~~N~l~~~lp~~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~L~l~~N~l~~~~p~~~~~l 238 (707)
.++++|+.|+|++|+++|.+|..+ +.+++|+.|+|++|+|+|.+|..|+++++| +.|||++|+++|.+|..+..+
T Consensus 626 ~~~~~l~~L~~LdLs~N~l~g~ip~~l-~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L-~~LdLs~N~l~g~ip~~l~~l 703 (768)
T 3rgz_A 626 PTFDNNGSMMFLDMSYNMLSGYIPKEI-GSMPYLFILNLGHNDISGSIPDEVGDLRGL-NILDLSSNKLDGRIPQAMSAL 703 (768)
T ss_dssp CSCSSSBCCCEEECCSSCCBSCCCGGG-GGCTTCCEEECCSSCCCSCCCGGGGGCTTC-CEEECCSSCCEECCCGGGGGC
T ss_pred hhhhccccccEEECcCCcccccCCHHH-hccccCCEEeCcCCccCCCCChHHhCCCCC-CEEECCCCcccCcCChHHhCC
Confidence 334667788888888888888765 789999999999999999999999999999 899999999999999999999
Q ss_pred CCccEEEccCCcCcccCCCCCCCCCCCCcccCCCCcccCCCCCCCCCC
Q 005226 239 PVTVSFDLRGNNLSGEIPQTGSFANQGPTAFLSNPLLCGFPLQKSCKD 286 (707)
Q Consensus 239 ~~L~~l~l~~N~l~~~~p~~~~~~~~~~~~~~~N~~l~~~~~~~~c~~ 286 (707)
+.|++|++++|+|+|.||+...+..+....|.|||.+||.|+. .|..
T Consensus 704 ~~L~~L~ls~N~l~g~iP~~~~~~~~~~~~~~gN~~Lcg~~l~-~C~~ 750 (768)
T 3rgz_A 704 TMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYPLP-RCDP 750 (768)
T ss_dssp CCCSEEECCSSEEEEECCSSSSGGGSCGGGGCSCTEEESTTSC-CCCS
T ss_pred CCCCEEECcCCcccccCCCchhhccCCHHHhcCCchhcCCCCc-CCCC
Confidence 9999999999999999999999999999999999999999887 8865
No 255
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.97 E-value=1e-31 Score=308.86 Aligned_cols=243 Identities=25% Similarity=0.368 Sum_probs=213.0
Q ss_pred cccHHHHHHHHhcCcCCCCCC-------CCCCCCCCCCCcee---ceeEeCCCCCCCCCcEEEEEcCCCCccccCCCCcC
Q 005226 21 SPDGLTLLSLKSAIDQTDTSV-------FADWNENDPTPCRW---SGISCMNITGFPDPRVVGVAISGKNVRGYIPSELG 90 (707)
Q Consensus 21 ~~d~~~l~~~k~~~~~~~~~~-------~~~W~~~~~~~C~w---~gv~c~~~~~~~~~~v~~L~L~~n~l~~~~~~~l~ 90 (707)
..|+.||.+|++++..+.+.. ..+|+.+ .++|.| .||+|+.. ++|+.|+|++|++.|.+|++|+
T Consensus 29 ~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~~-~~~c~w~~~~GV~C~~~-----~~V~~L~L~~~~l~g~lp~~l~ 102 (636)
T 4eco_A 29 IKDYLALKEIWDALNGKNWSQQGFGTQPGANWNFN-KELDMWGAQPGVSLNSN-----GRVTGLSLEGFGASGRVPDAIG 102 (636)
T ss_dssp HHHHHHHHHHHHHTTGGGCCCCC------CCCCCS-SCGGGTTCCTTEEECTT-----CCEEEEECTTSCCEEEECGGGG
T ss_pred HHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCCC-CCcccccCCCCeEEcCC-----CCEEEEEecCcccCCcCChHHh
Confidence 358999999999997555543 3489865 578999 99999752 6999999999999999999999
Q ss_pred CCCCCCEEEcccCC------------------------------------------------------------------
Q 005226 91 SLIYLRRLNLHNNN------------------------------------------------------------------ 104 (707)
Q Consensus 91 ~l~~L~~L~L~~N~------------------------------------------------------------------ 104 (707)
+|++|++|+|++|.
T Consensus 103 ~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~ 182 (636)
T 4eco_A 103 QLTELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRIT 182 (636)
T ss_dssp GCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCCCCCCC
T ss_pred cCccceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHHHHHHHhhcCccccccccccccc
Confidence 99999999999984
Q ss_pred ------------cCCCCCccccCCCCCceEEecCccCCCC-----------------CCcccC--CCCCccEEeccCCcc
Q 005226 105 ------------LFGSLPDQLFNATSLHSIFLYGNNLSGS-----------------LPPSVC--NLPRLQNLDLSNNSF 153 (707)
Q Consensus 105 ------------l~~~~p~~~~~l~~L~~L~L~~N~l~~~-----------------~p~~~~--~l~~L~~L~Ls~N~l 153 (707)
|++ +|..|.++++|++|+|++|+|++. +|..++ ++++|++|+|++|++
T Consensus 183 l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l 261 (636)
T 4eco_A 183 LKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPN 261 (636)
T ss_dssp CCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTT
T ss_pred hhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcC
Confidence 445 788999999999999999999985 999999 999999999999999
Q ss_pred cccCCCCCcccchhhhhhhcCCc-ccc-cCCCcccccC------CCccEEeccCCCCCCCCCc--chhhhhccccEEEec
Q 005226 154 SGSLPDGLKNCKQLQRLILARNK-FSG-QIPAGIWPEL------ENLVQLDLSDNDFKGPIPN--DLGELQSLSATLNLS 223 (707)
Q Consensus 154 ~~~~p~~~~~l~~L~~L~l~~N~-l~~-~lp~~~~~~l------~~L~~L~ls~N~l~~~~p~--~~~~l~~L~~~L~l~ 223 (707)
.+.+|..|.++++|+.|+|++|+ ++| .+|..+ ..+ ++|++|+|++|+++ .+|. .++++++| +.|+|+
T Consensus 262 ~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~-~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L-~~L~L~ 338 (636)
T 4eco_A 262 LTKLPTFLKALPEMQLINVACNRGISGEQLKDDW-QALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKL-GMLECL 338 (636)
T ss_dssp CSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHH-HHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTC-CEEECC
T ss_pred CccChHHHhcCCCCCEEECcCCCCCccccchHHH-HhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCC-CEEeCc
Confidence 99999999999999999999998 998 788876 344 99999999999999 8998 99999999 799999
Q ss_pred cCcCcCCCCCcCCCCCCccEEEccCCcCcccCCCCCCCCC-CCCcccCCCCc
Q 005226 224 YNHLSGKIPKSLGNLPVTVSFDLRGNNLSGEIPQTGSFAN-QGPTAFLSNPL 274 (707)
Q Consensus 224 ~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~~~~-~~~~~~~~N~~ 274 (707)
+|+++|.+| .+..+++|+.|++++|+++..+.....+.+ +..+.+.+|..
T Consensus 339 ~N~l~g~ip-~~~~l~~L~~L~L~~N~l~~lp~~l~~l~~~L~~L~Ls~N~l 389 (636)
T 4eco_A 339 YNQLEGKLP-AFGSEIKLASLNLAYNQITEIPANFCGFTEQVENLSFAHNKL 389 (636)
T ss_dssp SCCCEEECC-CCEEEEEESEEECCSSEEEECCTTSEEECTTCCEEECCSSCC
T ss_pred CCcCccchh-hhCCCCCCCEEECCCCccccccHhhhhhcccCcEEEccCCcC
Confidence 999999999 899999999999999999944444455666 77778877764
No 256
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.97 E-value=2.6e-31 Score=311.26 Aligned_cols=238 Identities=23% Similarity=0.354 Sum_probs=208.4
Q ss_pred cccHHHHHHHHhcCcCCCCCCCCCCCCCC------CCCcee------------ceeEeCCCCCCCCCcEEEEEcCCCCcc
Q 005226 21 SPDGLTLLSLKSAIDQTDTSVFADWNEND------PTPCRW------------SGISCMNITGFPDPRVVGVAISGKNVR 82 (707)
Q Consensus 21 ~~d~~~l~~~k~~~~~~~~~~~~~W~~~~------~~~C~w------------~gv~c~~~~~~~~~~v~~L~L~~n~l~ 82 (707)
..|+.||++||+++. +| +|+.++ |++|.| .||+|+. ..+|+.|+|++|++.
T Consensus 268 ~~d~~ALl~~k~~l~-~~-----~W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~-----~~~V~~L~Ls~~~L~ 336 (876)
T 4ecn_A 268 IKDYKALKAIWEALD-GK-----NWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDN-----NGRVTGLSLAGFGAK 336 (876)
T ss_dssp HHHHHHHHHHHHHTT-GG-----GCCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTEEECT-----TSCEEEEECTTTCCE
T ss_pred hHHHHHHHHHHHHcC-CC-----CCCcCCCcccccCCccccccccccccccCcCceEecC-----CCCEEEEECccCCCC
Confidence 469999999999996 44 787554 334999 9999986 279999999999999
Q ss_pred ccCCCCcCCCCCCCEEEc-ccCCcCCC-----------------------------------------------------
Q 005226 83 GYIPSELGSLIYLRRLNL-HNNNLFGS----------------------------------------------------- 108 (707)
Q Consensus 83 ~~~~~~l~~l~~L~~L~L-~~N~l~~~----------------------------------------------------- 108 (707)
|.+|+.|++|++|++|+| ++|.++|.
T Consensus 337 G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~~~ 416 (876)
T 4ecn_A 337 GRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKP 416 (876)
T ss_dssp EEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTSCC
T ss_pred CcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCccccc
Confidence 999999999999999999 77765443
Q ss_pred -----------------------CCccccCCCCCceEEecCccCCC-----------------CCCcccC--CCCCccEE
Q 005226 109 -----------------------LPDQLFNATSLHSIFLYGNNLSG-----------------SLPPSVC--NLPRLQNL 146 (707)
Q Consensus 109 -----------------------~p~~~~~l~~L~~L~L~~N~l~~-----------------~~p~~~~--~l~~L~~L 146 (707)
+|..|.++++|++|+|++|+|++ .+|+.++ ++++|+.|
T Consensus 417 i~~~~~l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L 496 (876)
T 4ecn_A 417 IKKDSRISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDV 496 (876)
T ss_dssp CCCCCCCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEE
T ss_pred cccccccchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEE
Confidence 78889999999999999999997 3999988 99999999
Q ss_pred eccCCcccccCCCCCcccchhhhhhhcCCc-ccc-cCCCcc------cccCCCccEEeccCCCCCCCCCc--chhhhhcc
Q 005226 147 DLSNNSFSGSLPDGLKNCKQLQRLILARNK-FSG-QIPAGI------WPELENLVQLDLSDNDFKGPIPN--DLGELQSL 216 (707)
Q Consensus 147 ~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~-l~~-~lp~~~------~~~l~~L~~L~ls~N~l~~~~p~--~~~~l~~L 216 (707)
+|++|++.+.+|..|.++++|+.|+|++|+ |+| .+|..+ +..+++|++|+|++|+|+ .+|. .|.++++|
T Consensus 497 ~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L 575 (876)
T 4ecn_A 497 ELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKL 575 (876)
T ss_dssp EEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTC
T ss_pred ECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCC
Confidence 999999999999999999999999999998 997 788754 234559999999999999 8998 99999999
Q ss_pred ccEEEeccCcCcCCCCCcCCCCCCccEEEccCCcCcccCC-CCCCCCC-CCCcccCCCCc
Q 005226 217 SATLNLSYNHLSGKIPKSLGNLPVTVSFDLRGNNLSGEIP-QTGSFAN-QGPTAFLSNPL 274 (707)
Q Consensus 217 ~~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p-~~~~~~~-~~~~~~~~N~~ 274 (707)
+.|+|++|+|+ .+| .+..+++|+.|++++|+++ .+| ....+.+ +..+.+.+|..
T Consensus 576 -~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L 631 (876)
T 4ecn_A 576 -GLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKL 631 (876)
T ss_dssp -CEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCC
T ss_pred -CEEECCCCCcc-cch-hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCC
Confidence 79999999999 888 8999999999999999999 555 4555666 77788888764
No 257
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.95 E-value=5.2e-28 Score=247.84 Aligned_cols=218 Identities=22% Similarity=0.277 Sum_probs=191.8
Q ss_pred CCceeceeEeCCCCCCCCCcEEEEEcCCCCccccCCCCcCCCCCCCEEEcccCCcCCCCCccccCCCCCceEEecCccCC
Q 005226 51 TPCRWSGISCMNITGFPDPRVVGVAISGKNVRGYIPSELGSLIYLRRLNLHNNNLFGSLPDQLFNATSLHSIFLYGNNLS 130 (707)
Q Consensus 51 ~~C~w~gv~c~~~~~~~~~~v~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 130 (707)
+.|.|.|+.|.-. ..++.+++++++++. +|..+. ++|++|+|++|+|++..+..|.++++|++|+|++|+|+
T Consensus 3 ~~C~~~~~~C~c~-----~~~~~l~~~~~~l~~-ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 74 (270)
T 2o6q_A 3 ALCKKDGGVCSCN-----NNKNSVDCSSKKLTA-IPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQ 74 (270)
T ss_dssp CCBGGGTCSBEEE-----TTTTEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCS
T ss_pred ccCCCCCCCCEeC-----CCCCEEEccCCCCCc-cCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccC
Confidence 6899999998652 356789999999995 566554 68999999999999887789999999999999999999
Q ss_pred CCCCcccCCCCCccEEeccCCcccccCCCCCcccchhhhhhhcCCcccccCCCcccccCCCccEEeccCCCCCCCCCcch
Q 005226 131 GSLPPSVCNLPRLQNLDLSNNSFSGSLPDGLKNCKQLQRLILARNKFSGQIPAGIWPELENLVQLDLSDNDFKGPIPNDL 210 (707)
Q Consensus 131 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~lp~~~~~~l~~L~~L~ls~N~l~~~~p~~~ 210 (707)
...+..|..+++|++|+|++|++++..+..|.++++|++|+|++|+++ .++...|..+++|++|+|++|+|++..+..|
T Consensus 75 ~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~ 153 (270)
T 2o6q_A 75 TLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLK-SLPPRVFDSLTKLTYLSLGYNELQSLPKGVF 153 (270)
T ss_dssp CCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCCCCTTTT
T ss_pred eeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccC-eeCHHHhCcCcCCCEEECCCCcCCccCHhHc
Confidence 666667899999999999999999777778899999999999999999 7888888999999999999999997766779
Q ss_pred hhhhccccEEEeccCcCcCCCCCcCCCCCCccEEEccCCcCcccCCC-CCCCCCCCCcccCCCCcccCC
Q 005226 211 GELQSLSATLNLSYNHLSGKIPKSLGNLPVTVSFDLRGNNLSGEIPQ-TGSFANQGPTAFLSNPLLCGF 278 (707)
Q Consensus 211 ~~l~~L~~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~-~~~~~~~~~~~~~~N~~l~~~ 278 (707)
..+++| ++|+|++|++++..+..|..+++|+.|++++|++++.++. ...+.++..+.+.+||+-|.+
T Consensus 154 ~~l~~L-~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c 221 (270)
T 2o6q_A 154 DKLTSL-KELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCTC 221 (270)
T ss_dssp TTCTTC-CEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCSS
T ss_pred cCCccc-ceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeCCC
Confidence 999999 7999999999987777899999999999999999977664 345677888899999998874
No 258
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.95 E-value=2.9e-28 Score=251.79 Aligned_cols=220 Identities=22% Similarity=0.238 Sum_probs=198.7
Q ss_pred eEeCC-----CCCCCCCcEEEEEcCCCCccccCCCCcCCCCCCCEEEcccCCcCCCCCccccCCCCCceEEecCcc-CCC
Q 005226 58 ISCMN-----ITGFPDPRVVGVAISGKNVRGYIPSELGSLIYLRRLNLHNNNLFGSLPDQLFNATSLHSIFLYGNN-LSG 131 (707)
Q Consensus 58 v~c~~-----~~~~~~~~v~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~ 131 (707)
|.|.. .+...+++++.|+|++|++++..+..|..+++|++|+|++|.|++..|..|.++++|++|+|++|+ ++.
T Consensus 16 ~~c~~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~ 95 (285)
T 1ozn_A 16 TSCPQQGLQAVPVGIPAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRS 95 (285)
T ss_dssp EECCSSCCSSCCTTCCTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCC
T ss_pred EEcCcCCcccCCcCCCCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccc
Confidence 66753 233345789999999999999888999999999999999999998889999999999999999997 887
Q ss_pred CCCcccCCCCCccEEeccCCcccccCCCCCcccchhhhhhhcCCcccccCCCcccccCCCccEEeccCCCCCCCCCcchh
Q 005226 132 SLPPSVCNLPRLQNLDLSNNSFSGSLPDGLKNCKQLQRLILARNKFSGQIPAGIWPELENLVQLDLSDNDFKGPIPNDLG 211 (707)
Q Consensus 132 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~lp~~~~~~l~~L~~L~ls~N~l~~~~p~~~~ 211 (707)
..|..|..+++|++|+|++|++++..|..|.++++|++|+|++|+++ .++...|..+++|++|+|++|+|++..+..|.
T Consensus 96 ~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~ 174 (285)
T 1ozn_A 96 VDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQ-ALPDDTFRDLGNLTHLFLHGNRISSVPERAFR 174 (285)
T ss_dssp CCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCEECTTTTT
T ss_pred cCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCccc-ccCHhHhccCCCccEEECCCCcccccCHHHhc
Confidence 77899999999999999999999888999999999999999999999 88888788999999999999999976667799
Q ss_pred hhhccccEEEeccCcCcCCCCCcCCCCCCccEEEccCCcCcccCCC-CCCCCCCCCcccCCCCcccCCC
Q 005226 212 ELQSLSATLNLSYNHLSGKIPKSLGNLPVTVSFDLRGNNLSGEIPQ-TGSFANQGPTAFLSNPLLCGFP 279 (707)
Q Consensus 212 ~l~~L~~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~-~~~~~~~~~~~~~~N~~l~~~~ 279 (707)
++++| +.|+|++|.+++..|..+..+++|+.|++++|++++.++. ...+.++..+.+.+|++.|.++
T Consensus 175 ~l~~L-~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~ 242 (285)
T 1ozn_A 175 GLHSL-DRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCR 242 (285)
T ss_dssp TCTTC-CEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGG
T ss_pred Ccccc-CEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCC
Confidence 99999 8999999999998899999999999999999999987654 4566778889999999998754
No 259
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.95 E-value=1.1e-29 Score=286.30 Aligned_cols=185 Identities=15% Similarity=0.035 Sum_probs=129.5
Q ss_pred eecccCeeEEEEEE-eCCCceEEEEEcCCCc----------hhhHHHHHHHHHHHHhc-CCCceeeeEEEEEcCCcceEE
Q 005226 414 VLGKSGLGIVYKVV-LGNGIPVAVRRLGEGG----------EQRHREFVTEVQAIAKV-KHPNIVKLRAYYWAPDEKLLI 481 (707)
Q Consensus 414 ~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~----------~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lV 481 (707)
..+.|++|.++.++ .-.|+.++||.+.... ....++|.+|+++|+++ .|+||+++++++.+++..|||
T Consensus 241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLV 320 (569)
T 4azs_A 241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLV 320 (569)
T ss_dssp C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEE
T ss_pred ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEE
Confidence 35667777666654 3358889999986531 12346799999999999 799999999999999999999
Q ss_pred EEeecCCChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEecccccccc
Q 005226 482 SDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLI 561 (707)
Q Consensus 482 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~ 561 (707)
|||++||+|.++|...+ .++.. +|+.||+.||+|+|+ ++||||||||+|||++.++.+||+|||+|+..
T Consensus 321 MEyv~G~~L~d~i~~~~-----~l~~~---~I~~QIl~AL~ylH~---~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~ 389 (569)
T 4azs_A 321 MEKLPGRLLSDMLAAGE-----EIDRE---KILGSLLRSLAALEK---QGFWHDDVRPWNVMVDARQHARLIDFGSIVTT 389 (569)
T ss_dssp EECCCSEEHHHHHHTTC-----CCCHH---HHHHHHHHHHHHHHH---TTCEESCCCGGGEEECTTSCEEECCCTTEESC
T ss_pred EecCCCCcHHHHHHhCC-----CCCHH---HHHHHHHHHHHHHHH---CCceeccCchHhEEECCCCCEEEeecccCeeC
Confidence 99999999999998654 45543 589999999999999 89999999999999999999999999999866
Q ss_pred cccCCCCCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCC
Q 005226 562 NITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSP 627 (707)
Q Consensus 562 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P 627 (707)
...... .....||++|+|||++.+ .+..++|+||+|++++++.++..|
T Consensus 390 ~~~~~~----------------~~t~vGTp~YmAPE~l~g--~~~~~~d~~s~g~~~~~l~~~~~~ 437 (569)
T 4azs_A 390 PQDCSW----------------PTNLVQSFFVFVNELFAE--NKSWNGFWRSAPVHPFNLPQPWSN 437 (569)
T ss_dssp C---CC----------------SHHHHHHHHHHHHHHC-------------------CCCCTTHHH
T ss_pred CCCCcc----------------ccCceechhhccHHHhCC--CCCCcccccccccchhhhccccch
Confidence 432211 134568999999999753 466789999999998887665444
No 260
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.94 E-value=9.8e-27 Score=239.14 Aligned_cols=226 Identities=20% Similarity=0.210 Sum_probs=194.4
Q ss_pred CCceec--eeEeCC-----CCCCCCCcEEEEEcCCCCccccCCCCcCCCCCCCEEEcccCCcCCCCCccccCCCCCceEE
Q 005226 51 TPCRWS--GISCMN-----ITGFPDPRVVGVAISGKNVRGYIPSELGSLIYLRRLNLHNNNLFGSLPDQLFNATSLHSIF 123 (707)
Q Consensus 51 ~~C~w~--gv~c~~-----~~~~~~~~v~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 123 (707)
|.|.+. .+.|.+ .|...+.+++.|+|++|++++..+..|.++++|++|+|++|+|++..+..|.++++|++|+
T Consensus 3 C~~~~~~~~~~c~~~~l~~ip~~l~~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 82 (276)
T 2z62_A 3 CVEVVPNITYQCMELNFYKIPDNLPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLI 82 (276)
T ss_dssp SEEEETTTEEECTTSCCSSCCSSSCTTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEE
T ss_pred ceeccCCceEEecCCCccccCCCCCCCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEE
Confidence 334444 477864 3333446899999999999998888999999999999999999988888999999999999
Q ss_pred ecCccCCCCCCcccCCCCCccEEeccCCcccccCCCCCcccchhhhhhhcCCcccc-cCCCcccccCCCccEEeccCCCC
Q 005226 124 LYGNNLSGSLPPSVCNLPRLQNLDLSNNSFSGSLPDGLKNCKQLQRLILARNKFSG-QIPAGIWPELENLVQLDLSDNDF 202 (707)
Q Consensus 124 L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~-~lp~~~~~~l~~L~~L~ls~N~l 202 (707)
|++|+|++..|..|.++++|++|++++|++++..+..+.++++|++|+|++|++++ .+|. .|..+++|++|+|++|+|
T Consensus 83 L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~-~~~~l~~L~~L~Ls~N~l 161 (276)
T 2z62_A 83 LTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPE-YFSNLTNLEHLDLSSNKI 161 (276)
T ss_dssp CTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCG-GGGGCTTCCEEECCSSCC
T ss_pred CCCCccCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCch-hhccCCCCCEEECCCCCC
Confidence 99999998888999999999999999999997777789999999999999999983 2455 458999999999999999
Q ss_pred CCCCCcchhhhhcccc----EEEeccCcCcCCCCCcCCCCCCccEEEccCCcCcccCCCC-CCCCCCCCcccCCCCcccC
Q 005226 203 KGPIPNDLGELQSLSA----TLNLSYNHLSGKIPKSLGNLPVTVSFDLRGNNLSGEIPQT-GSFANQGPTAFLSNPLLCG 277 (707)
Q Consensus 203 ~~~~p~~~~~l~~L~~----~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~-~~~~~~~~~~~~~N~~l~~ 277 (707)
++..+..+..++++ + .|++++|.+++..+..+ ...+|+.|++++|++++.++.. ..+.++..+.+.+||+-|.
T Consensus 162 ~~~~~~~~~~l~~L-~~l~l~L~ls~n~l~~~~~~~~-~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 239 (276)
T 2z62_A 162 QSIYCTDLRVLHQM-PLLNLSLDLSLNPMNFIQPGAF-KEIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 239 (276)
T ss_dssp CEECGGGGHHHHTC-TTCCEEEECCSSCCCEECTTSS-CSCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCC
T ss_pred CcCCHHHhhhhhhc-cccceeeecCCCcccccCcccc-CCCcccEEECCCCceeecCHhHhcccccccEEEccCCccccc
Confidence 98888899998888 6 89999999996555555 4558999999999999877653 5577888899999999987
Q ss_pred CC
Q 005226 278 FP 279 (707)
Q Consensus 278 ~~ 279 (707)
++
T Consensus 240 c~ 241 (276)
T 2z62_A 240 CP 241 (276)
T ss_dssp TT
T ss_pred CC
Confidence 54
No 261
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.94 E-value=8e-27 Score=257.39 Aligned_cols=222 Identities=20% Similarity=0.209 Sum_probs=181.6
Q ss_pred eceeEeCC-----CCCCCCCcEEEEEcCCCCccccCCCCcCCCCCCCEEEcccCCcCCCCCccccCCCCCceEEecCccC
Q 005226 55 WSGISCMN-----ITGFPDPRVVGVAISGKNVRGYIPSELGSLIYLRRLNLHNNNLFGSLPDQLFNATSLHSIFLYGNNL 129 (707)
Q Consensus 55 w~gv~c~~-----~~~~~~~~v~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l 129 (707)
|..|.|.+ .|...+.+++.|+|++|+|++..|..|.++++|++|+|++|+|++..|..|.++++|++|+|++|+|
T Consensus 56 ~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l 135 (452)
T 3zyi_A 56 FSKVVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWL 135 (452)
T ss_dssp SCEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCC
T ss_pred CcEEEECCCCcCccCCCCCCCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcC
Confidence 56788874 2333447899999999999999999999999999999999999988889999999999999999999
Q ss_pred CCCCCcccCCCCCccEEeccCCcccccCCCCCcc-------------------------cchhhhhhhcCCcccccCCCc
Q 005226 130 SGSLPPSVCNLPRLQNLDLSNNSFSGSLPDGLKN-------------------------CKQLQRLILARNKFSGQIPAG 184 (707)
Q Consensus 130 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-------------------------l~~L~~L~l~~N~l~~~lp~~ 184 (707)
++..+..|..+++|++|+|++|+|+...+..|.+ +++|+.|+|++|+|+ .+|.
T Consensus 136 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~~~- 213 (452)
T 3zyi_A 136 TVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIK-DMPN- 213 (452)
T ss_dssp SBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCS-SCCC-
T ss_pred CccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccc-cccc-
Confidence 9777777999999999999999998655544444 455555555555555 4443
Q ss_pred ccccCCCccEEeccCCCCCCCCCcchhhhhccccEEEeccCcCcCCCCCcCCCCCCccEEEccCCcCcccCCCC-CCCCC
Q 005226 185 IWPELENLVQLDLSDNDFKGPIPNDLGELQSLSATLNLSYNHLSGKIPKSLGNLPVTVSFDLRGNNLSGEIPQT-GSFAN 263 (707)
Q Consensus 185 ~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~-~~~~~ 263 (707)
+..+++|+.|+|++|+|++..|..|.++++| +.|+|++|+|++..|..|..+++|+.|+|++|+|++.++.. ..+.+
T Consensus 214 -~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L-~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 291 (452)
T 3zyi_A 214 -LTPLVGLEELEMSGNHFPEIRPGSFHGLSSL-KKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRY 291 (452)
T ss_dssp -CTTCTTCCEEECTTSCCSEECGGGGTTCTTC-CEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTT
T ss_pred -ccccccccEEECcCCcCcccCcccccCccCC-CEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccC
Confidence 3466677777777888877778888899999 79999999999888889999999999999999999776643 44677
Q ss_pred CCCcccCCCCcccCCCC
Q 005226 264 QGPTAFLSNPLLCGFPL 280 (707)
Q Consensus 264 ~~~~~~~~N~~l~~~~~ 280 (707)
+..+.+.+||+-|.+.+
T Consensus 292 L~~L~L~~Np~~CdC~~ 308 (452)
T 3zyi_A 292 LVELHLHHNPWNCDCDI 308 (452)
T ss_dssp CCEEECCSSCEECSTTT
T ss_pred CCEEEccCCCcCCCCCc
Confidence 88889999999998653
No 262
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.94 E-value=7.6e-27 Score=256.63 Aligned_cols=222 Identities=20% Similarity=0.225 Sum_probs=177.5
Q ss_pred eceeEeCC-----CCCCCCCcEEEEEcCCCCccccCCCCcCCCCCCCEEEcccCCcCCCCCccccCCCCCceEEecCccC
Q 005226 55 WSGISCMN-----ITGFPDPRVVGVAISGKNVRGYIPSELGSLIYLRRLNLHNNNLFGSLPDQLFNATSLHSIFLYGNNL 129 (707)
Q Consensus 55 w~gv~c~~-----~~~~~~~~v~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l 129 (707)
|..|.|.+ .|...+..++.|+|++|+|++..+..|.++++|++|+|++|+|++..+..|.++++|++|+|++|+|
T Consensus 45 ~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l 124 (440)
T 3zyj_A 45 FSKVICVRKNLREVPDGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRL 124 (440)
T ss_dssp SCEEECCSCCCSSCCSCCCTTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCC
T ss_pred CCEEEeCCCCcCcCCCCCCCCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcC
Confidence 56789974 3444457899999999999999999999999999999999999988888999999999999999999
Q ss_pred CCCCCcccCCCCCccEEeccCCcccccCCCCCcccc-------------------------hhhhhhhcCCcccccCCCc
Q 005226 130 SGSLPPSVCNLPRLQNLDLSNNSFSGSLPDGLKNCK-------------------------QLQRLILARNKFSGQIPAG 184 (707)
Q Consensus 130 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-------------------------~L~~L~l~~N~l~~~lp~~ 184 (707)
+...+..|..+++|+.|+|++|+|+...+..|.+++ +|+.|+|++|+|+ .+|.
T Consensus 125 ~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~~~- 202 (440)
T 3zyj_A 125 TTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EIPN- 202 (440)
T ss_dssp SSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS-SCCC-
T ss_pred CeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCc-cccc-
Confidence 966667899999999999999988865554555444 4555555555555 4443
Q ss_pred ccccCCCccEEeccCCCCCCCCCcchhhhhccccEEEeccCcCcCCCCCcCCCCCCccEEEccCCcCcccCCCC-CCCCC
Q 005226 185 IWPELENLVQLDLSDNDFKGPIPNDLGELQSLSATLNLSYNHLSGKIPKSLGNLPVTVSFDLRGNNLSGEIPQT-GSFAN 263 (707)
Q Consensus 185 ~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~-~~~~~ 263 (707)
+..+++|+.|+|++|+|++..|..|.++++| +.|+|++|+|++..|..|..+++|+.|+|++|+|++.++.. ..+.+
T Consensus 203 -~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L-~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 280 (440)
T 3zyj_A 203 -LTPLIKLDELDLSGNHLSAIRPGSFQGLMHL-QKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHH 280 (440)
T ss_dssp -CTTCSSCCEEECTTSCCCEECTTTTTTCTTC-CEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTT
T ss_pred -cCCCcccCEEECCCCccCccChhhhccCccC-CEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccC
Confidence 3456677777777777777777888888888 78888888888888888889999999999999999776643 44677
Q ss_pred CCCcccCCCCcccCCCC
Q 005226 264 QGPTAFLSNPLLCGFPL 280 (707)
Q Consensus 264 ~~~~~~~~N~~l~~~~~ 280 (707)
+..+.+.+||+.|.+.+
T Consensus 281 L~~L~L~~Np~~CdC~l 297 (440)
T 3zyj_A 281 LERIHLHHNPWNCNCDI 297 (440)
T ss_dssp CCEEECCSSCEECSSTT
T ss_pred CCEEEcCCCCccCCCCc
Confidence 88889999999998643
No 263
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.94 E-value=4e-27 Score=245.89 Aligned_cols=227 Identities=20% Similarity=0.238 Sum_probs=142.5
Q ss_pred CCCceeceeEeCC-----CCCCCCCcEEEEEcCCCCccccCCCCcCCCCCCCEEEcccCCcCCC--CCcc----------
Q 005226 50 PTPCRWSGISCMN-----ITGFPDPRVVGVAISGKNVRGYIPSELGSLIYLRRLNLHNNNLFGS--LPDQ---------- 112 (707)
Q Consensus 50 ~~~C~w~gv~c~~-----~~~~~~~~v~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~--~p~~---------- 112 (707)
+|.|.|.+|.|.+ .|...+.+++.|+|++|+++...+..|.++++|++|+|++|+|+.. .|..
T Consensus 4 ~C~C~~~~l~c~~~~l~~ip~~~~~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L 83 (306)
T 2z66_A 4 RCSCSGTEIRCNSKGLTSVPTGIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYL 83 (306)
T ss_dssp TCEEETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEE
T ss_pred CCeeCCCEEEcCCCCcccCCCCCCCCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEE
Confidence 4679999999985 2223346899999999999976666689999999999999998732 2334
Q ss_pred -------------ccCCCCCceEEecCccCCCCCC-cccCCCCCccEEeccCCcccccCCCCCcccchhhhhhhcCCccc
Q 005226 113 -------------LFNATSLHSIFLYGNNLSGSLP-PSVCNLPRLQNLDLSNNSFSGSLPDGLKNCKQLQRLILARNKFS 178 (707)
Q Consensus 113 -------------~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 178 (707)
+.++++|++|+|++|++++..+ ..+..+++|+.|+|++|++++..|..|.++++|+.|+|++|+++
T Consensus 84 ~Ls~n~i~~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 163 (306)
T 2z66_A 84 DLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQ 163 (306)
T ss_dssp ECCSCSEEEEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEG
T ss_pred ECCCCccccChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccc
Confidence 4444555555555555553332 34555566666666666665555555666666666666666665
Q ss_pred ccCCCcccccCCCccEEeccCCCCCCCCCcchhhhhccccEEEeccCcCcCCCCCcCCCCCCccEEEccCCcCcccCCCC
Q 005226 179 GQIPAGIWPELENLVQLDLSDNDFKGPIPNDLGELQSLSATLNLSYNHLSGKIPKSLGNLPVTVSFDLRGNNLSGEIPQT 258 (707)
Q Consensus 179 ~~lp~~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~ 258 (707)
+.+....|..+++|++|+|++|+|++..|..+..+++| +.|+|++|++++..+..+..+++|+.|++++|++++.+|..
T Consensus 164 ~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L-~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 242 (306)
T 2z66_A 164 ENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSL-QVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQE 242 (306)
T ss_dssp GGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTC-CEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSS
T ss_pred cccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCC-CEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHH
Confidence 32222234566666666666666665556666666666 56666666666555555666666666666666666655532
Q ss_pred -CCC-CCCCCcccCCCCcccC
Q 005226 259 -GSF-ANQGPTAFLSNPLLCG 277 (707)
Q Consensus 259 -~~~-~~~~~~~~~~N~~l~~ 277 (707)
..+ .++..+.+.+|++-|.
T Consensus 243 ~~~~~~~L~~L~L~~N~~~~~ 263 (306)
T 2z66_A 243 LQHFPSSLAFLNLTQNDFACT 263 (306)
T ss_dssp CCCCCTTCCEEECTTCCEECS
T ss_pred HHhhhccCCEEEccCCCeecc
Confidence 222 2455566666666554
No 264
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.94 E-value=2.1e-26 Score=233.22 Aligned_cols=194 Identities=24% Similarity=0.288 Sum_probs=176.9
Q ss_pred CCceeceeEeCCCCCCCCCcEEEEEcCCCCccccCCCCcCCCCCCCEEEcccCCcCCCCCccccCCCCCceEEecCccCC
Q 005226 51 TPCRWSGISCMNITGFPDPRVVGVAISGKNVRGYIPSELGSLIYLRRLNLHNNNLFGSLPDQLFNATSLHSIFLYGNNLS 130 (707)
Q Consensus 51 ~~C~w~gv~c~~~~~~~~~~v~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 130 (707)
.||.|.|.+|.. ..+.+++++++++ .+|..+. ++|+.|+|++|+|++..+..|.++++|++|+|++|+|+
T Consensus 3 ~Cp~~~gC~C~~-------~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~ 72 (251)
T 3m19_A 3 TCETVTGCTCNE-------GKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQ 72 (251)
T ss_dssp -CHHHHSSEEEG-------GGTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCC
T ss_pred cCCCCCceEcCC-------CCeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCC
Confidence 467999999963 4557999999999 4566665 68999999999999999999999999999999999999
Q ss_pred CCCCcccCCCCCccEEeccCCcccccCCCCCcccchhhhhhhcCCcccccCCCcccccCCCccEEeccCCCCCCCCCcch
Q 005226 131 GSLPPSVCNLPRLQNLDLSNNSFSGSLPDGLKNCKQLQRLILARNKFSGQIPAGIWPELENLVQLDLSDNDFKGPIPNDL 210 (707)
Q Consensus 131 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~lp~~~~~~l~~L~~L~ls~N~l~~~~p~~~ 210 (707)
+..|..|..+++|+.|+|++|+|++..+..|.++++|++|+|++|+|+ .+|...|..+++|++|+|++|+|++..+..|
T Consensus 73 ~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 151 (251)
T 3m19_A 73 TLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLK-SLPSGVFDRLTKLKELRLNTNQLQSIPAGAF 151 (251)
T ss_dssp CCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCCCCTTTT
T ss_pred ccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCC-CcChhHhccCCcccEEECcCCcCCccCHHHc
Confidence 888888999999999999999999877888999999999999999999 8888888999999999999999997777789
Q ss_pred hhhhccccEEEeccCcCcCCCCCcCCCCCCccEEEccCCcCcccCC
Q 005226 211 GELQSLSATLNLSYNHLSGKIPKSLGNLPVTVSFDLRGNNLSGEIP 256 (707)
Q Consensus 211 ~~l~~L~~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p 256 (707)
.++++| +.|+|++|+|++..+..+..+++|+.|++++|++++...
T Consensus 152 ~~l~~L-~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~ 196 (251)
T 3m19_A 152 DKLTNL-QTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCSRC 196 (251)
T ss_dssp TTCTTC-CEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTTST
T ss_pred CcCcCC-CEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCCcc
Confidence 999999 899999999998888899999999999999999997744
No 265
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.94 E-value=1.2e-25 Score=230.26 Aligned_cols=211 Identities=19% Similarity=0.261 Sum_probs=186.0
Q ss_pred CCCCCCCCCCc--eeceeEeCC-----CCCCCCCcEEEEEcCCCCccccCCCCcCCCCCCCEEEcccCCcCCCCCccccC
Q 005226 43 ADWNENDPTPC--RWSGISCMN-----ITGFPDPRVVGVAISGKNVRGYIPSELGSLIYLRRLNLHNNNLFGSLPDQLFN 115 (707)
Q Consensus 43 ~~W~~~~~~~C--~w~gv~c~~-----~~~~~~~~v~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~ 115 (707)
-.|.... |.| .|..|.|.. .|...+..++.|+|++|++++..+..|.++++|++|+|++|+|+...+..|.+
T Consensus 5 C~~~~~~-C~c~~~~~~l~~~~~~l~~ip~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~ 83 (270)
T 2o6q_A 5 CKKDGGV-CSCNNNKNSVDCSSKKLTAIPSNIPADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKE 83 (270)
T ss_dssp BGGGTCS-BEEETTTTEEECTTSCCSSCCSCCCTTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSS
T ss_pred CCCCCCC-CEeCCCCCEEEccCCCCCccCCCCCCCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcC
Confidence 3576432 345 467799974 33334468999999999999888889999999999999999999777777889
Q ss_pred CCCCceEEecCccCCCCCCcccCCCCCccEEeccCCcccccCCCCCcccchhhhhhhcCCcccccCCCcccccCCCccEE
Q 005226 116 ATSLHSIFLYGNNLSGSLPPSVCNLPRLQNLDLSNNSFSGSLPDGLKNCKQLQRLILARNKFSGQIPAGIWPELENLVQL 195 (707)
Q Consensus 116 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~lp~~~~~~l~~L~~L 195 (707)
+++|++|+|++|+|++..+..|..+++|+.|+|++|++++..+..|.++++|+.|+|++|+|+ .+|...|..+++|+.|
T Consensus 84 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~~~~~~~~~l~~L~~L 162 (270)
T 2o6q_A 84 LKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQ-SLPKGVFDKLTSLKEL 162 (270)
T ss_dssp CTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEE
T ss_pred CCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCC-ccCHhHccCCccccee
Confidence 999999999999999777778899999999999999999888888999999999999999999 8888888999999999
Q ss_pred eccCCCCCCCCCcchhhhhccccEEEeccCcCcCCCCCcCCCCCCccEEEccCCcCcccCC
Q 005226 196 DLSDNDFKGPIPNDLGELQSLSATLNLSYNHLSGKIPKSLGNLPVTVSFDLRGNNLSGEIP 256 (707)
Q Consensus 196 ~ls~N~l~~~~p~~~~~l~~L~~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p 256 (707)
+|++|+|++..+..|.++++| +.|+|++|+|++..+..+..+++|+.|++++|++....+
T Consensus 163 ~L~~n~l~~~~~~~~~~l~~L-~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 222 (270)
T 2o6q_A 163 RLYNNQLKRVPEGAFDKLTEL-KTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCTCN 222 (270)
T ss_dssp ECCSSCCSCCCTTTTTTCTTC-CEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCSSS
T ss_pred EecCCcCcEeChhHhccCCCc-CEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeCCCc
Confidence 999999998777789999999 899999999998777789999999999999999986654
No 266
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.93 E-value=5.1e-27 Score=250.26 Aligned_cols=226 Identities=22% Similarity=0.257 Sum_probs=174.2
Q ss_pred CCCceeceeEeC-------CCCCCCCCcEEEEEcCCCCccccCCCCcCCCCCCCEEEcccCCcCCCCCccccCCCCCceE
Q 005226 50 PTPCRWSGISCM-------NITGFPDPRVVGVAISGKNVRGYIPSELGSLIYLRRLNLHNNNLFGSLPDQLFNATSLHSI 122 (707)
Q Consensus 50 ~~~C~w~gv~c~-------~~~~~~~~~v~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 122 (707)
.++|.|.|+ |. ..|....++++.|+|++|++++..+..|.++++|++|+|++|+|++..|..|.++++|++|
T Consensus 27 ~~~C~~~~~-c~~~~~~l~~iP~~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 105 (353)
T 2z80_A 27 SLSCDRNGI-CKGSSGSLNSIPSGLTEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHL 105 (353)
T ss_dssp CCEECTTSE-EECCSTTCSSCCTTCCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred CCCCCCCeE-eeCCCCCcccccccccccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEE
Confidence 367999987 54 2233334689999999999998878899999999999999999998888889999999999
Q ss_pred EecCccCCCCCCcccCCCCCccEEeccCCcccccCCC--CCcccchhhhhhhcCCc-ccccCCCcccccCCCccEEeccC
Q 005226 123 FLYGNNLSGSLPPSVCNLPRLQNLDLSNNSFSGSLPD--GLKNCKQLQRLILARNK-FSGQIPAGIWPELENLVQLDLSD 199 (707)
Q Consensus 123 ~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~--~~~~l~~L~~L~l~~N~-l~~~lp~~~~~~l~~L~~L~ls~ 199 (707)
+|++|+|++..+..|.++++|++|+|++|+++ .+|. .|.++++|++|++++|+ ++ .++...|..+++|++|++++
T Consensus 106 ~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~~l~~L~~L~l~~n~~~~-~~~~~~~~~l~~L~~L~l~~ 183 (353)
T 2z80_A 106 DLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYK-TLGETSLFSHLTKLQILRVGNMDTFT-KIQRKDFAGLTFLEELEIDA 183 (353)
T ss_dssp ECCSSCCSSCCHHHHTTCTTCSEEECTTCCCS-SSCSSCSCTTCTTCCEEEEEESSSCC-EECTTTTTTCCEEEEEEEEE
T ss_pred ECCCCcCCcCCHhHhCCCccCCEEECCCCCCc-ccCchhhhccCCCCcEEECCCCcccc-ccCHHHccCCCCCCEEECCC
Confidence 99999999555555899999999999999999 4554 78899999999999985 55 67666677888888888888
Q ss_pred CCCCCCCCcchhhhhccc-----------------------cEEEeccCcCcCCC-------------------------
Q 005226 200 NDFKGPIPNDLGELQSLS-----------------------ATLNLSYNHLSGKI------------------------- 231 (707)
Q Consensus 200 N~l~~~~p~~~~~l~~L~-----------------------~~L~l~~N~l~~~~------------------------- 231 (707)
|++++..|..+.++++|. +.|++++|.+++..
T Consensus 184 n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~l~~ 263 (353)
T 2z80_A 184 SDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITD 263 (353)
T ss_dssp TTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCCCCEEEEESCBCCH
T ss_pred CCcCccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCccccccccccccccccchhhccccccccccC
Confidence 888877777776655550 44555555555422
Q ss_pred ------CCcCCCCCCccEEEccCCcCcccCCCC-CCCCCCCCcccCCCCcccCC
Q 005226 232 ------PKSLGNLPVTVSFDLRGNNLSGEIPQT-GSFANQGPTAFLSNPLLCGF 278 (707)
Q Consensus 232 ------p~~~~~l~~L~~l~l~~N~l~~~~p~~-~~~~~~~~~~~~~N~~l~~~ 278 (707)
|..+..+++|+.|++++|+++..++.. ..+.++..+.+.+|++.|.+
T Consensus 264 ~~l~~l~~~l~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~~~~~~ 317 (353)
T 2z80_A 264 ESLFQVMKLLNQISGLLELEFSRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 317 (353)
T ss_dssp HHHHHHHHHHHTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCH
T ss_pred cchhhhHHHHhcccCCCEEECCCCCCCccCHHHHhcCCCCCEEEeeCCCccCcC
Confidence 223456778888888888888444432 45677777888888887764
No 267
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.93 E-value=1.9e-25 Score=230.98 Aligned_cols=202 Identities=26% Similarity=0.251 Sum_probs=174.3
Q ss_pred CcEEEEEcCCCCccccCCCCcCCCCCCCEEEcccCCcCCCCCccccCCCCCceEEecCccCCCCCCcccCCCCCccEEec
Q 005226 69 PRVVGVAISGKNVRGYIPSELGSLIYLRRLNLHNNNLFGSLPDQLFNATSLHSIFLYGNNLSGSLPPSVCNLPRLQNLDL 148 (707)
Q Consensus 69 ~~v~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 148 (707)
.+++.|++++|+++. +|..+. ++|+.|+|++|+|++..|..|.++++|++|+|++|+|++ ++.. ..+++|+.|+|
T Consensus 10 ~~l~~l~~~~~~l~~-ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~-~~l~~L~~L~L 84 (290)
T 1p9a_G 10 ASHLEVNCDKRNLTA-LPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTK-LQVD-GTLPVLGTLDL 84 (290)
T ss_dssp TTCCEEECTTSCCSS-CCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCE-EECC-SCCTTCCEEEC
T ss_pred CCccEEECCCCCCCc-CCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCc-ccCC-CCCCcCCEEEC
Confidence 478889999999984 565554 689999999999998888899999999999999999984 4433 78999999999
Q ss_pred cCCcccccCCCCCcccchhhhhhhcCCcccccCCCcccccCCCccEEeccCCCCCCCCCcchhhhhccccEEEeccCcCc
Q 005226 149 SNNSFSGSLPDGLKNCKQLQRLILARNKFSGQIPAGIWPELENLVQLDLSDNDFKGPIPNDLGELQSLSATLNLSYNHLS 228 (707)
Q Consensus 149 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~lp~~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~L~l~~N~l~ 228 (707)
++|+|+ .+|..+.++++|+.|+|++|+|+ .+|...|..+++|++|+|++|+|++..+..|..+++| +.|+|++|+|+
T Consensus 85 s~N~l~-~l~~~~~~l~~L~~L~l~~N~l~-~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L-~~L~L~~N~l~ 161 (290)
T 1p9a_G 85 SHNQLQ-SLPLLGQTLPALTVLDVSFNRLT-SLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKL-EKLSLANNNLT 161 (290)
T ss_dssp CSSCCS-SCCCCTTTCTTCCEEECCSSCCC-CCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTC-CEEECTTSCCS
T ss_pred CCCcCC-cCchhhccCCCCCEEECCCCcCc-ccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCC-CEEECCCCcCC
Confidence 999998 78888999999999999999999 8888888899999999999999997777778899999 79999999999
Q ss_pred CCCCCcCCCCCCccEEEccCCcCcccCCCCCCCCCCCCcccCCCCcccCC
Q 005226 229 GKIPKSLGNLPVTVSFDLRGNNLSGEIPQTGSFANQGPTAFLSNPLLCGF 278 (707)
Q Consensus 229 ~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~~~~~~~~~~~~N~~l~~~ 278 (707)
+..+..+..+++|+.|++++|+|+..++.......+..+.+.+||+.|.+
T Consensus 162 ~l~~~~~~~l~~L~~L~L~~N~l~~ip~~~~~~~~L~~l~L~~Np~~C~c 211 (290)
T 1p9a_G 162 ELPAGLLNGLENLDTLLLQENSLYTIPKGFFGSHLLPFAFLHGNPWLCNC 211 (290)
T ss_dssp CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCCCSEEECCSCCBCCSG
T ss_pred ccCHHHhcCcCCCCEEECCCCcCCccChhhcccccCCeEEeCCCCccCcC
Confidence 76666778899999999999999976665666667788888999998874
No 268
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.93 E-value=7.8e-26 Score=238.28 Aligned_cols=183 Identities=22% Similarity=0.285 Sum_probs=174.5
Q ss_pred CcEEEEEcCCCCccccCCCCcCCCCCCCEEEcccCCcCCCCCccccCCCCCceEEecCccCCCCCCcccCC---------
Q 005226 69 PRVVGVAISGKNVRGYIPSELGSLIYLRRLNLHNNNLFGSLPDQLFNATSLHSIFLYGNNLSGSLPPSVCN--------- 139 (707)
Q Consensus 69 ~~v~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~--------- 139 (707)
.+++.|+|++|+++ .+|..++++++|++|+|++|+|+ .+|..+.++++|++|+|++|++.+.+|..+..
T Consensus 104 ~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~~ 181 (328)
T 4fcg_A 104 SHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASGEHQG 181 (328)
T ss_dssp TTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCCEEE
T ss_pred CCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccchhhhcc
Confidence 58999999999999 88999999999999999999999 88999999999999999999999999998765
Q ss_pred CCCccEEeccCCcccccCCCCCcccchhhhhhhcCCcccccCCCcccccCCCccEEeccCCCCCCCCCcchhhhhccccE
Q 005226 140 LPRLQNLDLSNNSFSGSLPDGLKNCKQLQRLILARNKFSGQIPAGIWPELENLVQLDLSDNDFKGPIPNDLGELQSLSAT 219 (707)
Q Consensus 140 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~lp~~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~ 219 (707)
+++|+.|+|++|+|+ .+|..+.++++|+.|+|++|+++ .+|.. +..+++|++|+|++|++.+.+|..+.++++| ++
T Consensus 182 l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~-~l~~~-l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L-~~ 257 (328)
T 4fcg_A 182 LVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLS-ALGPA-IHHLPKLEELDLRGCTALRNYPPIFGGRAPL-KR 257 (328)
T ss_dssp STTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCC-CCCGG-GGGCTTCCEEECTTCTTCCBCCCCTTCCCCC-CE
T ss_pred CCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCC-cCchh-hccCCCCCEEECcCCcchhhhHHHhcCCCCC-CE
Confidence 999999999999999 89999999999999999999999 68876 5799999999999999999999999999999 89
Q ss_pred EEeccCcCcCCCCCcCCCCCCccEEEccCCcCcccCCC
Q 005226 220 LNLSYNHLSGKIPKSLGNLPVTVSFDLRGNNLSGEIPQ 257 (707)
Q Consensus 220 L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~ 257 (707)
|+|++|.+.+.+|..+..+++|+.|++++|++.+.+|.
T Consensus 258 L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~ 295 (328)
T 4fcg_A 258 LILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPS 295 (328)
T ss_dssp EECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCG
T ss_pred EECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccH
Confidence 99999999999999999999999999999999999993
No 269
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.92 E-value=8.2e-25 Score=230.90 Aligned_cols=219 Identities=21% Similarity=0.272 Sum_probs=139.1
Q ss_pred CCceeceeEeCC-----CCCCCCCcEEEEEcCCCCccccCCCCcCCCCCCCEEEcccCCcCCCCCccccCCCCCceEEec
Q 005226 51 TPCRWSGISCMN-----ITGFPDPRVVGVAISGKNVRGYIPSELGSLIYLRRLNLHNNNLFGSLPDQLFNATSLHSIFLY 125 (707)
Q Consensus 51 ~~C~w~gv~c~~-----~~~~~~~~v~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 125 (707)
|.|.|+.+.|.+ .+...++.++.|+|++|++++..+..|.++++|++|+|++|+|++..|..|.++++|++|+|+
T Consensus 29 c~c~l~~l~~~~~~l~~lp~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls 108 (330)
T 1xku_A 29 CQCHLRVVQCSDLGLEKVPKDLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLS 108 (330)
T ss_dssp CEEETTEEECTTSCCCSCCCSCCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred CcCCCeEEEecCCCccccCccCCCCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECC
Confidence 558999999974 233334789999999999999888899999999999999999998889999999999999999
Q ss_pred CccCCCCCCcccCCCCCccEEeccCCcccccCCCCCcccchhhhhhhcCCcccc-cCCCcccccCC--------------
Q 005226 126 GNNLSGSLPPSVCNLPRLQNLDLSNNSFSGSLPDGLKNCKQLQRLILARNKFSG-QIPAGIWPELE-------------- 190 (707)
Q Consensus 126 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~-~lp~~~~~~l~-------------- 190 (707)
+|+|+ .+|..+. ++|+.|++++|++++..+..|.++++|+.|+|++|+++. .+....|..++
T Consensus 109 ~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~ 185 (330)
T 1xku_A 109 KNQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITT 185 (330)
T ss_dssp SSCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCS
T ss_pred CCcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCcccc
Confidence 99998 5665443 455555555555554444444444444444444444431 12222233444
Q ss_pred -------CccEEeccCCCCCCCCCcchhhhhccccEEEeccCcCcCCCCCcCCCCCCccEEEccCCcCcccCCCCCCCCC
Q 005226 191 -------NLVQLDLSDNDFKGPIPNDLGELQSLSATLNLSYNHLSGKIPKSLGNLPVTVSFDLRGNNLSGEIPQTGSFAN 263 (707)
Q Consensus 191 -------~L~~L~ls~N~l~~~~p~~~~~l~~L~~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~~~~ 263 (707)
+|++|+|++|++++..|..|.++++| +.|+|++|++++..+..+..+++|+.|++++|+++..+.....+.+
T Consensus 186 l~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L-~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~l~~l~~ 264 (330)
T 1xku_A 186 IPQGLPPSLTELHLDGNKITKVDAASLKGLNNL-AKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLVKVPGGLADHKY 264 (330)
T ss_dssp CCSSCCTTCSEEECTTSCCCEECTGGGTTCTTC-CEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCSSCCTTTTTCSS
T ss_pred CCccccccCCEEECCCCcCCccCHHHhcCCCCC-CEEECCCCcCceeChhhccCCCCCCEEECCCCcCccCChhhccCCC
Confidence 55555555555554445555555555 4555555555554444555555555555555555533222333344
Q ss_pred CCCcccCCCC
Q 005226 264 QGPTAFLSNP 273 (707)
Q Consensus 264 ~~~~~~~~N~ 273 (707)
+..+.+.+|+
T Consensus 265 L~~L~l~~N~ 274 (330)
T 1xku_A 265 IQVVYLHNNN 274 (330)
T ss_dssp CCEEECCSSC
T ss_pred cCEEECCCCc
Confidence 4444444443
No 270
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.92 E-value=5.7e-26 Score=234.59 Aligned_cols=186 Identities=23% Similarity=0.263 Sum_probs=174.7
Q ss_pred CcEEEEEcCCCCccccCCCCcCCCCCCCEEEcccCC-cCCCCCccccCCCCCceEEecCccCCCCCCcccCCCCCccEEe
Q 005226 69 PRVVGVAISGKNVRGYIPSELGSLIYLRRLNLHNNN-LFGSLPDQLFNATSLHSIFLYGNNLSGSLPPSVCNLPRLQNLD 147 (707)
Q Consensus 69 ~~v~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 147 (707)
++++.|+|++|.+++..|..|..+++|++|+|++|. ++...|..|.++++|++|+|++|++++..|..|.++++|++|+
T Consensus 56 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 135 (285)
T 1ozn_A 56 RNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLY 135 (285)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEE
Confidence 689999999999999999999999999999999997 8877789999999999999999999988899999999999999
Q ss_pred ccCCcccccCCCCCcccchhhhhhhcCCcccccCCCcccccCCCccEEeccCCCCCCCCCcchhhhhccccEEEeccCcC
Q 005226 148 LSNNSFSGSLPDGLKNCKQLQRLILARNKFSGQIPAGIWPELENLVQLDLSDNDFKGPIPNDLGELQSLSATLNLSYNHL 227 (707)
Q Consensus 148 Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~lp~~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~L~l~~N~l 227 (707)
|++|++++..+..|.++++|+.|+|++|+|+ .+|...|..+++|++|+|++|+|++..|..|.++++| +.|+|++|++
T Consensus 136 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L-~~L~l~~n~l 213 (285)
T 1ozn_A 136 LQDNALQALPDDTFRDLGNLTHLFLHGNRIS-SVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRL-MTLYLFANNL 213 (285)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-EECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTC-CEEECCSSCC
T ss_pred CCCCcccccCHhHhccCCCccEEECCCCccc-ccCHHHhcCccccCEEECCCCcccccCHhHccCcccc-cEeeCCCCcC
Confidence 9999999777778999999999999999999 7888878899999999999999999889999999999 8999999999
Q ss_pred cCCCCCcCCCCCCccEEEccCCcCcccCC
Q 005226 228 SGKIPKSLGNLPVTVSFDLRGNNLSGEIP 256 (707)
Q Consensus 228 ~~~~p~~~~~l~~L~~l~l~~N~l~~~~p 256 (707)
++..+..+..+++|+.|++++|++.+..+
T Consensus 214 ~~~~~~~~~~l~~L~~L~l~~N~~~c~~~ 242 (285)
T 1ozn_A 214 SALPTEALAPLRALQYLRLNDNPWVCDCR 242 (285)
T ss_dssp SCCCHHHHTTCTTCCEEECCSSCEECSGG
T ss_pred CcCCHHHcccCcccCEEeccCCCccCCCC
Confidence 98777789999999999999999987654
No 271
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.92 E-value=3e-25 Score=222.89 Aligned_cols=215 Identities=17% Similarity=0.236 Sum_probs=182.7
Q ss_pred CCcee-ce--eEeCCCCCC--CCCcEEEEEcCCCCccccCCCCcCCCCCCCEEEcccCC-cCCCCCccccCCCCCceEEe
Q 005226 51 TPCRW-SG--ISCMNITGF--PDPRVVGVAISGKNVRGYIPSELGSLIYLRRLNLHNNN-LFGSLPDQLFNATSLHSIFL 124 (707)
Q Consensus 51 ~~C~w-~g--v~c~~~~~~--~~~~v~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~L 124 (707)
|.|.+ .+ |.|...+.. .+.+++.|+|++|++++..+..|.++++|++|+|++|+ +++..+..|.++++|++|+|
T Consensus 8 C~C~~~~~~~v~c~~l~~ip~~~~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l 87 (239)
T 2xwt_C 8 CECHQEEDFRVTCKDIQRIPSLPPSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEI 87 (239)
T ss_dssp CSEEECSTTEEEECSCSSCCCCCTTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEE
T ss_pred CeeCCCCcceeEccCccccCCCCCcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEEC
Confidence 55654 55 459652222 34689999999999999888899999999999999997 98777778999999999999
Q ss_pred cC-ccCCCCCCcccCCCCCccEEeccCCcccccCCCCCcccchhh---hhhhcCC-cccccCCCcccccCCCcc-EEecc
Q 005226 125 YG-NNLSGSLPPSVCNLPRLQNLDLSNNSFSGSLPDGLKNCKQLQ---RLILARN-KFSGQIPAGIWPELENLV-QLDLS 198 (707)
Q Consensus 125 ~~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~---~L~l~~N-~l~~~lp~~~~~~l~~L~-~L~ls 198 (707)
++ |+|++..+..|.++++|+.|+|++|++++ +|. |.++++|+ .|++++| +++ .+|...|..+++|+ .|+|+
T Consensus 88 ~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~-~i~~~~~~~l~~L~~~L~l~ 164 (239)
T 2xwt_C 88 RNTRNLTYIDPDALKELPLLKFLGIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMT-SIPVNAFQGLCNETLTLKLY 164 (239)
T ss_dssp EEETTCCEECTTSEECCTTCCEEEEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCC-EECTTTTTTTBSSEEEEECC
T ss_pred CCCCCeeEcCHHHhCCCCCCCEEeCCCCCCcc-ccc-cccccccccccEEECCCCcchh-hcCcccccchhcceeEEEcC
Confidence 99 99997777889999999999999999995 776 88888888 9999999 998 88888889999999 99999
Q ss_pred CCCCCCCCCcchhhhhccccEEEeccCc-CcCCCCCcCCCC-CCccEEEccCCcCcccCCCCCCCCCCCCcccCCC
Q 005226 199 DNDFKGPIPNDLGELQSLSATLNLSYNH-LSGKIPKSLGNL-PVTVSFDLRGNNLSGEIPQTGSFANQGPTAFLSN 272 (707)
Q Consensus 199 ~N~l~~~~p~~~~~l~~L~~~L~l~~N~-l~~~~p~~~~~l-~~L~~l~l~~N~l~~~~p~~~~~~~~~~~~~~~N 272 (707)
+|+|+ .+|......++| +.|+|++|+ +++..+..|..+ ++|+.|++++|++++.++ ..+.++..+.+.++
T Consensus 165 ~n~l~-~i~~~~~~~~~L-~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l~~--~~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 165 NNGFT-SVQGYAFNGTKL-DAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTALPS--KGLEHLKELIARNT 236 (239)
T ss_dssp SCCCC-EECTTTTTTCEE-EEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCCCCC--TTCTTCSEEECTTC
T ss_pred CCCCc-ccCHhhcCCCCC-CEEEcCCCCCcccCCHHHhhccccCCcEEECCCCccccCCh--hHhccCceeeccCc
Confidence 99999 566554444889 899999995 997777889999 999999999999996655 26667766665554
No 272
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.92 E-value=7.1e-25 Score=242.00 Aligned_cols=162 Identities=21% Similarity=0.251 Sum_probs=140.6
Q ss_pred CCceece--eEeCC-----CCCCCCCcEEEEEcCCCCccccCCCCcCCCCCCCEEEcccCCcCCCC-CccccCCCCCceE
Q 005226 51 TPCRWSG--ISCMN-----ITGFPDPRVVGVAISGKNVRGYIPSELGSLIYLRRLNLHNNNLFGSL-PDQLFNATSLHSI 122 (707)
Q Consensus 51 ~~C~w~g--v~c~~-----~~~~~~~~v~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L 122 (707)
+.|.|.+ |.|.. .+. .+.+++.|+|++|++++..|..|.++++|++|+|++|.+.+.+ +..|.++++|++|
T Consensus 6 ~~c~~~~~~~~c~~~~l~~lp~-l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L 84 (455)
T 3v47_A 6 SECSVIGYNAICINRGLHQVPE-LPAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIIL 84 (455)
T ss_dssp -CCEEETTEEECCSSCCSSCCC-CCTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEE
T ss_pred ceeEEEccccCcCCCCcccCCC-CCCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEE
Confidence 3466665 88874 233 3478999999999999999999999999999999999998655 5679999999999
Q ss_pred EecCccCCCCCCcccCCCCCccEEeccCCcccccCCCC--CcccchhhhhhhcCCcccccCCCcccccCCCccEEeccCC
Q 005226 123 FLYGNNLSGSLPPSVCNLPRLQNLDLSNNSFSGSLPDG--LKNCKQLQRLILARNKFSGQIPAGIWPELENLVQLDLSDN 200 (707)
Q Consensus 123 ~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~--~~~l~~L~~L~l~~N~l~~~lp~~~~~~l~~L~~L~ls~N 200 (707)
+|++|++++..|..|.++++|++|+|++|++++..|.. |.++++|++|+|++|++++..|...|..+++|++|+|++|
T Consensus 85 ~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n 164 (455)
T 3v47_A 85 KLDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFN 164 (455)
T ss_dssp ECTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTC
T ss_pred eCCCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCC
Confidence 99999999888999999999999999999999755544 9999999999999999996667777889999999999999
Q ss_pred CCCCCCCcchhhh
Q 005226 201 DFKGPIPNDLGEL 213 (707)
Q Consensus 201 ~l~~~~p~~~~~l 213 (707)
++++..|..+..+
T Consensus 165 ~l~~~~~~~l~~l 177 (455)
T 3v47_A 165 KVKSICEEDLLNF 177 (455)
T ss_dssp CBSCCCTTTSGGG
T ss_pred cccccChhhhhcc
Confidence 9998888776654
No 273
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.92 E-value=1e-24 Score=230.39 Aligned_cols=216 Identities=19% Similarity=0.237 Sum_probs=151.0
Q ss_pred CCceeceeEeCC-----CCCCCCCcEEEEEcCCCCccccCCCCcCCCCCCCEEEcccCCcCCCCCccccCCCCCceEEec
Q 005226 51 TPCRWSGISCMN-----ITGFPDPRVVGVAISGKNVRGYIPSELGSLIYLRRLNLHNNNLFGSLPDQLFNATSLHSIFLY 125 (707)
Q Consensus 51 ~~C~w~gv~c~~-----~~~~~~~~v~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 125 (707)
|.|.|..+.|.. .+....++++.|+|++|++++..|..|.++++|++|+|++|+|++..|..|.++++|++|+|+
T Consensus 31 c~c~l~~l~~~~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 110 (332)
T 2ft3_A 31 CHCHLRVVQCSDLGLKAVPKEISPDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYIS 110 (332)
T ss_dssp CEEETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECC
T ss_pred CcccCCEEECCCCCccccCCCCCCCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECC
Confidence 458999999974 233334689999999999999888999999999999999999998889999999999999999
Q ss_pred CccCCCCCCcccCCCCCccEEeccCCcccccCCCCCcccchhhhhhhcCCcccc------------------------cC
Q 005226 126 GNNLSGSLPPSVCNLPRLQNLDLSNNSFSGSLPDGLKNCKQLQRLILARNKFSG------------------------QI 181 (707)
Q Consensus 126 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~------------------------~l 181 (707)
+|+|+ .+|..+. ++|++|+|++|++++..+..|.++++|+.|++++|+++. .+
T Consensus 111 ~n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~L~~L~l~~n~l~~l 187 (332)
T 2ft3_A 111 KNHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGLKLNYLRISEAKLTGI 187 (332)
T ss_dssp SSCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSCCCSCCBCCSSBCSSC
T ss_pred CCcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCCccCEEECcCCCCCcc
Confidence 99988 5555443 556666666666654444445555555555555555531 33
Q ss_pred CCcccccCCCccEEeccCCCCCCCCCcchhhhhccccEEEeccCcCcCCCCCcCCCCCCccEEEccCCcCcccCCCCCCC
Q 005226 182 PAGIWPELENLVQLDLSDNDFKGPIPNDLGELQSLSATLNLSYNHLSGKIPKSLGNLPVTVSFDLRGNNLSGEIPQTGSF 261 (707)
Q Consensus 182 p~~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~~ 261 (707)
|..++ ++|++|+|++|++++..|..+.++++| +.|+|++|++++..|..+..+++|+.|++++|+++..++....+
T Consensus 188 ~~~~~---~~L~~L~l~~n~i~~~~~~~l~~l~~L-~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~l~~l 263 (332)
T 2ft3_A 188 PKDLP---ETLNELHLDHNKIQAIELEDLLRYSKL-YRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLSRVPAGLPDL 263 (332)
T ss_dssp CSSSC---SSCSCCBCCSSCCCCCCTTSSTTCTTC-SCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCCBCCTTGGGC
T ss_pred Ccccc---CCCCEEECCCCcCCccCHHHhcCCCCC-CEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCeecChhhhcC
Confidence 33322 466666666666666666667777777 57777777777666666677777777777777776333333444
Q ss_pred CCCCCcccCCCC
Q 005226 262 ANQGPTAFLSNP 273 (707)
Q Consensus 262 ~~~~~~~~~~N~ 273 (707)
.++..+.+.+|+
T Consensus 264 ~~L~~L~l~~N~ 275 (332)
T 2ft3_A 264 KLLQVVYLHTNN 275 (332)
T ss_dssp TTCCEEECCSSC
T ss_pred ccCCEEECCCCC
Confidence 555556665554
No 274
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.91 E-value=9.4e-25 Score=241.01 Aligned_cols=126 Identities=25% Similarity=0.320 Sum_probs=90.0
Q ss_pred cccccCCCCCcccchhhhhhhcCCcccccCCCcccccCCCccEEeccCCCCCCCCCcchhhhhccccEEEeccCcCcCCC
Q 005226 152 SFSGSLPDGLKNCKQLQRLILARNKFSGQIPAGIWPELENLVQLDLSDNDFKGPIPNDLGELQSLSATLNLSYNHLSGKI 231 (707)
Q Consensus 152 ~l~~~~p~~~~~l~~L~~L~l~~N~l~~~lp~~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~L~l~~N~l~~~~ 231 (707)
++++..|..|.++++|+.|+|++|+++ .++...|..+++|++|+|++|+|++..|..|.++++| ++|+|++|++++..
T Consensus 286 ~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L-~~L~Ls~N~l~~~~ 363 (455)
T 3v47_A 286 KIFALLKSVFSHFTDLEQLTLAQNEIN-KIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKL-EVLDLSYNHIRALG 363 (455)
T ss_dssp CCCEECTTTTTTCTTCCEEECTTSCCC-EECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTC-CEEECCSSCCCEEC
T ss_pred cccccchhhcccCCCCCEEECCCCccc-ccChhHhcCcccCCEEECCCCccCCcChhHhcCcccC-CEEECCCCcccccC
Confidence 333334555666677777777777777 4444445677788888888888877667777778888 68888888888777
Q ss_pred CCcCCCCCCccEEEccCCcCcccCCCC-CCCCCCCCcccCCCCcccCCC
Q 005226 232 PKSLGNLPVTVSFDLRGNNLSGEIPQT-GSFANQGPTAFLSNPLLCGFP 279 (707)
Q Consensus 232 p~~~~~l~~L~~l~l~~N~l~~~~p~~-~~~~~~~~~~~~~N~~l~~~~ 279 (707)
|..+..+++|+.|++++|++++.++.. ..+.++..+.+.+|++-|.+|
T Consensus 364 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 412 (455)
T 3v47_A 364 DQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 412 (455)
T ss_dssp TTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred hhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCC
Confidence 778888888888888888888765543 456667777788888777654
No 275
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.91 E-value=1.5e-25 Score=234.66 Aligned_cols=200 Identities=25% Similarity=0.275 Sum_probs=144.0
Q ss_pred CcEEEEEcCCCCccccCCCCc--CCCCCCCEEEcccCCcCCCCCccccCC-----CCCceEEecCccCCCCCCcccCCCC
Q 005226 69 PRVVGVAISGKNVRGYIPSEL--GSLIYLRRLNLHNNNLFGSLPDQLFNA-----TSLHSIFLYGNNLSGSLPPSVCNLP 141 (707)
Q Consensus 69 ~~v~~L~L~~n~l~~~~~~~l--~~l~~L~~L~L~~N~l~~~~p~~~~~l-----~~L~~L~L~~N~l~~~~p~~~~~l~ 141 (707)
.+++.|+|++|++++.+|..+ ..+++|++|+|++|+|++. |..+..+ ++|++|+|++|+|++..|..|+.++
T Consensus 95 ~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~ 173 (312)
T 1wwl_A 95 SGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFP 173 (312)
T ss_dssp SCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCS
T ss_pred CCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCC
Confidence 467777888888877777765 7778888888888888766 7767666 7788888888888776667777888
Q ss_pred CccEEeccCCccccc--CCCCC--cccchhhhhhhcCCcccc--cCCCcccccCCCccEEeccCCCCCCCCC-cchhhhh
Q 005226 142 RLQNLDLSNNSFSGS--LPDGL--KNCKQLQRLILARNKFSG--QIPAGIWPELENLVQLDLSDNDFKGPIP-NDLGELQ 214 (707)
Q Consensus 142 ~L~~L~Ls~N~l~~~--~p~~~--~~l~~L~~L~l~~N~l~~--~lp~~~~~~l~~L~~L~ls~N~l~~~~p-~~~~~l~ 214 (707)
+|+.|+|++|++.+. +|..+ .++++|++|+|++|+|++ .++..++..+++|++|+|++|+|++..| ..+..++
T Consensus 174 ~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~ 253 (312)
T 1wwl_A 174 ALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPS 253 (312)
T ss_dssp SCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCT
T ss_pred CCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcC
Confidence 888888888877654 23333 677788888888887772 3344555667788888888888876664 4555667
Q ss_pred ccccEEEeccCcCcCCCCCcCCCCCCccEEEccCCcCcccCCCCCCCCCCCCcccCCCCc
Q 005226 215 SLSATLNLSYNHLSGKIPKSLGNLPVTVSFDLRGNNLSGEIPQTGSFANQGPTAFLSNPL 274 (707)
Q Consensus 215 ~L~~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~~~~~~~~~~~~N~~ 274 (707)
+| ++|+|++|+|+ .+|..+. ++|+.|++++|+|++. |....+.++..+.+.+|++
T Consensus 254 ~L-~~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~~-p~~~~l~~L~~L~L~~N~l 308 (312)
T 1wwl_A 254 QL-NSLNLSFTGLK-QVPKGLP--AKLSVLDLSYNRLDRN-PSPDELPQVGNLSLKGNPF 308 (312)
T ss_dssp TC-CEEECTTSCCS-SCCSSCC--SEEEEEECCSSCCCSC-CCTTTSCEEEEEECTTCTT
T ss_pred CC-CEEECCCCccC-hhhhhcc--CCceEEECCCCCCCCC-hhHhhCCCCCEEeccCCCC
Confidence 77 67888888887 6777665 7788888888888766 5455666666677777653
No 276
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.91 E-value=2.1e-25 Score=249.94 Aligned_cols=190 Identities=18% Similarity=0.214 Sum_probs=143.9
Q ss_pred cceecccCeeEEEEEEeCCCceEEEEEcCCCch--------hhHHHHHHHHHHHHhcCCCceeeeEEEEEcCCcceEEEE
Q 005226 412 AYVLGKSGLGIVYKVVLGNGIPVAVRRLGEGGE--------QRHREFVTEVQAIAKVKHPNIVKLRAYYWAPDEKLLISD 483 (707)
Q Consensus 412 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~e 483 (707)
.++||+|+||.||+|.. .+..+++|+...... ...+.|.+|++++++++||||+++..++...+..++|||
T Consensus 341 ~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVmE 419 (540)
T 3en9_A 341 EHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMMS 419 (540)
T ss_dssp -------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEEE
T ss_pred CCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEEE
Confidence 45899999999999955 567788887543211 113568999999999999999977777778888999999
Q ss_pred eecCCChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEecccccccccc
Q 005226 484 FISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINI 563 (707)
Q Consensus 484 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~ 563 (707)
|+++|+|.+++.. +..|+.|++.||+|||+ ++|+||||||+|||++. .+||+|||+|+....
T Consensus 420 ~~~ggsL~~~l~~-------------~~~i~~qi~~aL~~LH~---~gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~ 481 (540)
T 3en9_A 420 YINGKLAKDVIED-------------NLDIAYKIGEIVGKLHK---NDVIHNDLTTSNFIFDK--DLYIIDFGLGKISNL 481 (540)
T ss_dssp CCCSEEHHHHSTT-------------CTHHHHHHHHHHHHHHH---TTEECTTCCTTSEEESS--SEEECCCTTCEECCC
T ss_pred CCCCCCHHHHHHH-------------HHHHHHHHHHHHHHHHH---CcCccCCCCHHHEEECC--eEEEEECccCEECCC
Confidence 9999999999974 45899999999999999 89999999999999999 999999999987653
Q ss_pred cCCCCCCCCCCcCCCCCCCCccccccCccccCCCCCCC-CCCCCchhhHHHHHHHHHHHHhCCCCCC
Q 005226 564 TGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVP-GNRPMQKWDVYSFGVVLLELLTGKSPEL 629 (707)
Q Consensus 564 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~~DV~S~Gv~l~elltg~~P~~ 629 (707)
...... ..+.......||+.|+|||++.. ...|+..+|+|+..+-.++-+.++.+|.
T Consensus 482 ~~~~~~---------~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~ 539 (540)
T 3en9_A 482 DEDKAV---------DLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV 539 (540)
T ss_dssp HHHHHH---------HHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred cccccc---------chhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence 211000 00000123467999999998642 1345678899999999999998887763
No 277
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.91 E-value=3.9e-25 Score=262.48 Aligned_cols=110 Identities=22% Similarity=0.221 Sum_probs=66.8
Q ss_pred CcEEEEEcCCCCccccCCCCcCCCCCCCEEEcccCCcCCCCCccccCCCCCceEEecCccCCCCCCcccCCCCCccEEec
Q 005226 69 PRVVGVAISGKNVRGYIPSELGSLIYLRRLNLHNNNLFGSLPDQLFNATSLHSIFLYGNNLSGSLPPSVCNLPRLQNLDL 148 (707)
Q Consensus 69 ~~v~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 148 (707)
.+++.|+|++|.+.+..|..|..+++|+.|+|++|+|++..|..|.++++|++|+|++|+|++..|..|..+++|+.|+|
T Consensus 266 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 345 (844)
T 3j0a_A 266 SSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDL 345 (844)
T ss_dssp SCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCTTCCEEEC
T ss_pred CCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCCCCCEEEC
Confidence 45666666666666666666666666666666666666555666666666666666666666555666666666666666
Q ss_pred cCCcccccCCCCCcccchhhhhhhcCCccc
Q 005226 149 SNNSFSGSLPDGLKNCKQLQRLILARNKFS 178 (707)
Q Consensus 149 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 178 (707)
++|++++..+..|.++++|+.|+|++|.++
T Consensus 346 ~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~ 375 (844)
T 3j0a_A 346 QKNHIAIIQDQTFKFLEKLQTLDLRDNALT 375 (844)
T ss_dssp CSCCCCCCCSSCSCSCCCCCEEEEETCCSC
T ss_pred CCCCCCccChhhhcCCCCCCEEECCCCCCC
Confidence 666665544555555555555555555544
No 278
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.91 E-value=2.4e-24 Score=222.71 Aligned_cols=182 Identities=26% Similarity=0.237 Sum_probs=168.1
Q ss_pred CCCcEEEEEcCCCCccccCCCCcCCCCCCCEEEcccCCcCCCCCccccCCCCCceEEecCccCCCCCCcccCCCCCccEE
Q 005226 67 PDPRVVGVAISGKNVRGYIPSELGSLIYLRRLNLHNNNLFGSLPDQLFNATSLHSIFLYGNNLSGSLPPSVCNLPRLQNL 146 (707)
Q Consensus 67 ~~~~v~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 146 (707)
.+.+++.|+|++|++++..+..|..+++|++|+|++|+|++..+ ...+++|++|+|++|+|+ .+|..+..+++|+.|
T Consensus 29 ~~~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L 105 (290)
T 1p9a_G 29 LPKDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQV--DGTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVL 105 (290)
T ss_dssp CCTTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEEC--CSCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEE
T ss_pred CCCCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccC--CCCCCcCCEEECCCCcCC-cCchhhccCCCCCEE
Confidence 34789999999999999999999999999999999999995443 378999999999999999 889999999999999
Q ss_pred eccCCcccccCCCCCcccchhhhhhhcCCcccccCCCcccccCCCccEEeccCCCCCCCCCcchhhhhccccEEEeccCc
Q 005226 147 DLSNNSFSGSLPDGLKNCKQLQRLILARNKFSGQIPAGIWPELENLVQLDLSDNDFKGPIPNDLGELQSLSATLNLSYNH 226 (707)
Q Consensus 147 ~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~lp~~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~L~l~~N~ 226 (707)
+|++|+|++..|..|.++++|+.|+|++|+|+ .+|...|..+++|+.|+|++|+|++..+..|.++++| +.|+|++|+
T Consensus 106 ~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L-~~L~L~~N~ 183 (290)
T 1p9a_G 106 DVSFNRLTSLPLGALRGLGELQELYLKGNELK-TLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENL-DTLLLQENS 183 (290)
T ss_dssp ECCSSCCCCCCSSTTTTCTTCCEEECTTSCCC-CCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTC-CEEECCSSC
T ss_pred ECCCCcCcccCHHHHcCCCCCCEEECCCCCCC-ccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCC-CEEECCCCc
Confidence 99999999777789999999999999999999 8899999999999999999999997666678899999 899999999
Q ss_pred CcCCCCCcCCCCCCccEEEccCCcCccc
Q 005226 227 LSGKIPKSLGNLPVTVSFDLRGNNLSGE 254 (707)
Q Consensus 227 l~~~~p~~~~~l~~L~~l~l~~N~l~~~ 254 (707)
|+ .+|..+..+++|+.|++++|++...
T Consensus 184 l~-~ip~~~~~~~~L~~l~L~~Np~~C~ 210 (290)
T 1p9a_G 184 LY-TIPKGFFGSHLLPFAFLHGNPWLCN 210 (290)
T ss_dssp CC-CCCTTTTTTCCCSEEECCSCCBCCS
T ss_pred CC-ccChhhcccccCCeEEeCCCCccCc
Confidence 99 7899999999999999999999753
No 279
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.91 E-value=1.5e-25 Score=234.72 Aligned_cols=183 Identities=31% Similarity=0.464 Sum_probs=148.3
Q ss_pred CcEEEEEcCCCCccccCCCCcCCCCCCCEEEcccCCcCCCCCccccCCCCCceEEecCccCCCCCCcccCCCC-CccEEe
Q 005226 69 PRVVGVAISGKNVRGYIPSELGSLIYLRRLNLHNNNLFGSLPDQLFNATSLHSIFLYGNNLSGSLPPSVCNLP-RLQNLD 147 (707)
Q Consensus 69 ~~v~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-~L~~L~ 147 (707)
.+++.|+|++|++++.+|..|.++++|++|+|++|+|++.+|..|.++++|++|+|++|+|++.+|..+..++ +|+.|+
T Consensus 101 ~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~ 180 (313)
T 1ogq_A 101 TQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMT 180 (313)
T ss_dssp TTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEE
T ss_pred CCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEE
Confidence 5788888888888888888888888888888888888888888888888888888888888878888888777 777777
Q ss_pred ccCCcccccCCCCCc-----------------------ccchhhhhhhcCCcccccCCCcccccCCCccEEeccCCCCCC
Q 005226 148 LSNNSFSGSLPDGLK-----------------------NCKQLQRLILARNKFSGQIPAGIWPELENLVQLDLSDNDFKG 204 (707)
Q Consensus 148 Ls~N~l~~~~p~~~~-----------------------~l~~L~~L~l~~N~l~~~lp~~~~~~l~~L~~L~ls~N~l~~ 204 (707)
|++|++++.+|..+. ++++|+.|+|++|++++.+|. +..+++|++|+|++|+|++
T Consensus 181 L~~N~l~~~~~~~~~~l~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~--~~~l~~L~~L~Ls~N~l~~ 258 (313)
T 1ogq_A 181 ISRNRLTGKIPPTFANLNLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK--VGLSKNLNGLDLRNNRIYG 258 (313)
T ss_dssp CCSSEEEEECCGGGGGCCCSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGG--CCCCTTCCEEECCSSCCEE
T ss_pred CcCCeeeccCChHHhCCcccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCc--ccccCCCCEEECcCCcccC
Confidence 777777766555554 445555555555555543333 4577899999999999999
Q ss_pred CCCcchhhhhccccEEEeccCcCcCCCCCcCCCCCCccEEEccCCc-CcccC
Q 005226 205 PIPNDLGELQSLSATLNLSYNHLSGKIPKSLGNLPVTVSFDLRGNN-LSGEI 255 (707)
Q Consensus 205 ~~p~~~~~l~~L~~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~-l~~~~ 255 (707)
.+|..+..+++| +.|+|++|+|+|.+|.. ..+++|+.+++++|+ +.|.+
T Consensus 259 ~~p~~l~~l~~L-~~L~Ls~N~l~~~ip~~-~~l~~L~~l~l~~N~~lc~~p 308 (313)
T 1ogq_A 259 TLPQGLTQLKFL-HSLNVSFNNLCGEIPQG-GNLQRFDVSAYANNKCLCGSP 308 (313)
T ss_dssp CCCGGGGGCTTC-CEEECCSSEEEEECCCS-TTGGGSCGGGTCSSSEEESTT
T ss_pred cCChHHhcCcCC-CEEECcCCcccccCCCC-ccccccChHHhcCCCCccCCC
Confidence 999999999999 89999999999999987 889999999999998 66643
No 280
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.91 E-value=1.6e-24 Score=212.73 Aligned_cols=179 Identities=23% Similarity=0.283 Sum_probs=98.5
Q ss_pred CCCceeceeEeCCCCCCCCCcEEEEEcCCCCccccCCCCcCCCCCCCEEEcccCCcCCCCCccccCCCCCceEEecCccC
Q 005226 50 PTPCRWSGISCMNITGFPDPRVVGVAISGKNVRGYIPSELGSLIYLRRLNLHNNNLFGSLPDQLFNATSLHSIFLYGNNL 129 (707)
Q Consensus 50 ~~~C~w~gv~c~~~~~~~~~~v~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l 129 (707)
.|.|+|.+|.|.... ++ .+|..+ .++|++|+|++|+|++..+..|.++++|++|+|++|+|
T Consensus 4 ~C~C~~~~v~c~~~~----------------l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l 64 (208)
T 2o6s_A 4 RCSCSGTTVECYSQG----------------RT-SVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKL 64 (208)
T ss_dssp TCEEETTEEECCSSC----------------CS-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCC
T ss_pred CCEECCCEEEecCCC----------------cc-CCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCcc
Confidence 467899999997521 11 122222 23555555555555544444455555555555555555
Q ss_pred CCCCCcccCCCCCccEEeccCCcccccCCCCCcccchhhhhhhcCCcccccCCCcccccCCCccEEeccCCCCCCCCCcc
Q 005226 130 SGSLPPSVCNLPRLQNLDLSNNSFSGSLPDGLKNCKQLQRLILARNKFSGQIPAGIWPELENLVQLDLSDNDFKGPIPND 209 (707)
Q Consensus 130 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~lp~~~~~~l~~L~~L~ls~N~l~~~~p~~ 209 (707)
++..+..|..+++|++|+|++|+|++..+..|.++++|++|+|++|+|+ .+|...|..+++|++|+|++|+|++..+..
T Consensus 65 ~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~ 143 (208)
T 2o6s_A 65 QSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQ-SLPDGVFDKLTQLKDLRLYQNQLKSVPDGV 143 (208)
T ss_dssp CCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCSCCCTTT
T ss_pred CccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCc-ccCHhHhccCCcCCEEECCCCccceeCHHH
Confidence 5444444555555555555555555444444555555555555555555 455554555566666666666665444444
Q ss_pred hhhhhccccEEEeccCcCcCCCCCcCCCCCCccEEEccCCcCcccCC
Q 005226 210 LGELQSLSATLNLSYNHLSGKIPKSLGNLPVTVSFDLRGNNLSGEIP 256 (707)
Q Consensus 210 ~~~l~~L~~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p 256 (707)
+..+++| +.|+|++|.+.+ .+++|+.|+++.|+++|.+|
T Consensus 144 ~~~l~~L-~~L~l~~N~~~~-------~~~~l~~L~~~~n~~~g~ip 182 (208)
T 2o6s_A 144 FDRLTSL-QYIWLHDNPWDC-------TCPGIRYLSEWINKHSGVVR 182 (208)
T ss_dssp TTTCTTC-CEEECCSCCBCC-------CTTTTHHHHHHHHHCTTTBB
T ss_pred hccCCCc-cEEEecCCCeec-------CCCCHHHHHHHHHhCCceee
Confidence 5555666 466666665543 33455566666666666655
No 281
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.91 E-value=3.2e-24 Score=238.25 Aligned_cols=217 Identities=17% Similarity=0.132 Sum_probs=190.6
Q ss_pred eceeEeCC-----CCCCCCCcEEEEEcCCCCccccCCCCcCCCCCCCEEEcccCCcCCCCCccccCCCCCceEEecCccC
Q 005226 55 WSGISCMN-----ITGFPDPRVVGVAISGKNVRGYIPSELGSLIYLRRLNLHNNNLFGSLPDQLFNATSLHSIFLYGNNL 129 (707)
Q Consensus 55 w~gv~c~~-----~~~~~~~~v~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l 129 (707)
|..|.|.. .|...+.+++.|+|++|+|++..+..|.++++|++|+|++|.|++..|..|.++++|++|+|++|+|
T Consensus 13 ~~~v~c~~~~l~~ip~~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l 92 (477)
T 2id5_A 13 DRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRL 92 (477)
T ss_dssp TTEEECCSCCCSSCCSCCCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCC
T ss_pred CCEEEeCCCCcCcCCCCCCCCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcC
Confidence 67899974 3334457899999999999999999999999999999999999998899999999999999999999
Q ss_pred CCCCCcccCCCCCccEEeccCCcccccCCCCCcccchhhhhhhcCCcccccCCCcccccCCCccEEeccCCCCCCCCCcc
Q 005226 130 SGSLPPSVCNLPRLQNLDLSNNSFSGSLPDGLKNCKQLQRLILARNKFSGQIPAGIWPELENLVQLDLSDNDFKGPIPND 209 (707)
Q Consensus 130 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~lp~~~~~~l~~L~~L~ls~N~l~~~~p~~ 209 (707)
++..+..|.++++|+.|+|++|++++..|..|.++++|+.|+|++|+++ .++...|..+++|+.|+|++|++++..+..
T Consensus 93 ~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~ 171 (477)
T 2id5_A 93 KLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLV-YISHRAFSGLNSLEQLTLEKCNLTSIPTEA 171 (477)
T ss_dssp CSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCC-EECTTSSTTCTTCCEEEEESCCCSSCCHHH
T ss_pred CccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccc-eeChhhccCCCCCCEEECCCCcCcccChhH
Confidence 9666677899999999999999999999999999999999999999999 666666789999999999999999777778
Q ss_pred hhhhhccccEEEeccCcCcCCCCCcCCCCCCccEEEccCCcCcccCCCC-CCCCCCCCcccCCCC
Q 005226 210 LGELQSLSATLNLSYNHLSGKIPKSLGNLPVTVSFDLRGNNLSGEIPQT-GSFANQGPTAFLSNP 273 (707)
Q Consensus 210 ~~~l~~L~~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~-~~~~~~~~~~~~~N~ 273 (707)
|.++++| +.|+|++|.+++..+..|..+++|+.|++++|++.+.+|.. ....++..+.+.+|.
T Consensus 172 l~~l~~L-~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~ 235 (477)
T 2id5_A 172 LSHLHGL-IVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCN 235 (477)
T ss_dssp HTTCTTC-CEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSC
T ss_pred hcccCCC-cEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCc
Confidence 9999999 79999999999988889999999999999999887776642 222355556665553
No 282
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.91 E-value=1.1e-23 Score=215.91 Aligned_cols=183 Identities=23% Similarity=0.290 Sum_probs=161.3
Q ss_pred CcEEEEEcCCCCccccCCCCcCCCCCCCEEEcccCCcCCCCCccccCCCCCceEEecCccCCCCCCcccCCCCCccEEec
Q 005226 69 PRVVGVAISGKNVRGYIPSELGSLIYLRRLNLHNNNLFGSLPDQLFNATSLHSIFLYGNNLSGSLPPSVCNLPRLQNLDL 148 (707)
Q Consensus 69 ~~v~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 148 (707)
.+++.|++++|.+... +.+..+++|++|+|++|.+++ + ..+.++++|++|+|++|+|++..+..|..+++|++|+|
T Consensus 41 ~~L~~L~l~~~~i~~~--~~l~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 116 (272)
T 3rfs_A 41 NSIDQIIANNSDIKSV--QGIQYLPNVRYLALGGNKLHD-I-SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVL 116 (272)
T ss_dssp TTCCEEECTTSCCCCC--TTGGGCTTCCEEECTTSCCCC-C-GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred cceeeeeeCCCCcccc--cccccCCCCcEEECCCCCCCC-c-hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEEC
Confidence 5788999999998853 458899999999999999986 3 47889999999999999999777778899999999999
Q ss_pred cCCcccccCCCCCcccchhhhhhhcCCcccccCCCcccccCCCccEEeccCCCCCCCCCcchhhhhccccEEEeccCcCc
Q 005226 149 SNNSFSGSLPDGLKNCKQLQRLILARNKFSGQIPAGIWPELENLVQLDLSDNDFKGPIPNDLGELQSLSATLNLSYNHLS 228 (707)
Q Consensus 149 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~lp~~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~L~l~~N~l~ 228 (707)
++|++++..+..|.++++|+.|+|++|+|+ .+|...|..+++|++|+|++|+|++..+..+.++++| +.|+|++|+++
T Consensus 117 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L-~~L~L~~N~l~ 194 (272)
T 3rfs_A 117 VENQLQSLPDGVFDKLTNLTYLNLAHNQLQ-SLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQL-KDLRLYQNQLK 194 (272)
T ss_dssp TTSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTC-CEEECCSSCCS
T ss_pred CCCcCCccCHHHhccCCCCCEEECCCCccC-ccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccC-CEEECCCCcCC
Confidence 999999777778899999999999999998 7887778889999999999999998777778899999 79999999999
Q ss_pred CCCCCcCCCCCCccEEEccCCcCcccCCC
Q 005226 229 GKIPKSLGNLPVTVSFDLRGNNLSGEIPQ 257 (707)
Q Consensus 229 ~~~p~~~~~l~~L~~l~l~~N~l~~~~p~ 257 (707)
+..|..+..+++|+.|++++|++.+..|.
T Consensus 195 ~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 223 (272)
T 3rfs_A 195 SVPDGVFDRLTSLQYIWLHDNPWDCTCPG 223 (272)
T ss_dssp CCCTTTTTTCTTCCEEECCSSCBCCCTTT
T ss_pred ccCHHHHhCCcCCCEEEccCCCccccCcH
Confidence 88888889999999999999999887763
No 283
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.91 E-value=1.9e-24 Score=246.77 Aligned_cols=202 Identities=20% Similarity=0.214 Sum_probs=144.1
Q ss_pred CcEEEEEcCCCCccccCCCCcCCCCCCCEEEcccCCcCCCCCccccCCCCCceEEecCccCCCCCCcccCCCCCccEEec
Q 005226 69 PRVVGVAISGKNVRGYIPSELGSLIYLRRLNLHNNNLFGSLPDQLFNATSLHSIFLYGNNLSGSLPPSVCNLPRLQNLDL 148 (707)
Q Consensus 69 ~~v~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 148 (707)
++++.|+|++|.|++..|..|+.+++|++|+|++|.|++..|..|.++++|++|+|++|.|++..+..|+++++|+.|+|
T Consensus 75 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 154 (597)
T 3oja_B 75 RQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSM 154 (597)
T ss_dssp CCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEe
Confidence 35677777777777777777777888888888888877777777777888888888888877555555677788888888
Q ss_pred cCCcccccCCCCCcccchhhhhhhcCCcccccCCCcccccC-------------------------------------CC
Q 005226 149 SNNSFSGSLPDGLKNCKQLQRLILARNKFSGQIPAGIWPEL-------------------------------------EN 191 (707)
Q Consensus 149 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~lp~~~~~~l-------------------------------------~~ 191 (707)
++|.|++..|..|.++++|+.|+|++|+|+ .++...+..+ ++
T Consensus 155 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~~~~~~l~~L~~L~l~~n~l~~l~~~~~L~~L~ls~n~l~~~~~~~~~~ 233 (597)
T 3oja_B 155 SNNNLERIEDDTFQATTSLQNLQLSSNRLT-HVDLSLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVVRGPVNVE 233 (597)
T ss_dssp CSSCCCBCCTTTTTTCTTCCEEECTTSCCS-BCCGGGCTTCSEEECCSSCCSEEECCTTCSEEECCSSCCCEEECSCCSC
T ss_pred eCCcCCCCChhhhhcCCcCcEEECcCCCCC-CcChhhhhhhhhhhcccCccccccCCchhheeeccCCcccccccccCCC
Confidence 888887777777777888888888888777 3443222211 23
Q ss_pred ccEEeccCCCCCCCCCcchhhhhccccEEEeccCcCcCCCCCcCCCCCCccEEEccCCcCcccCCCCCCCCCCCCcccCC
Q 005226 192 LVQLDLSDNDFKGPIPNDLGELQSLSATLNLSYNHLSGKIPKSLGNLPVTVSFDLRGNNLSGEIPQTGSFANQGPTAFLS 271 (707)
Q Consensus 192 L~~L~ls~N~l~~~~p~~~~~l~~L~~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~~~~~~~~~~~~ 271 (707)
|+.|+|++|.|++ +..+..+++| +.|+|++|.|++.+|..|..+++|+.|+|++|.+++.++....+.++..+.+.+
T Consensus 234 L~~L~L~~n~l~~--~~~l~~l~~L-~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~L~~L~Ls~ 310 (597)
T 3oja_B 234 LTILKLQHNNLTD--TAWLLNYPGL-VEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVALNLYGQPIPTLKVLDLSH 310 (597)
T ss_dssp CCEEECCSSCCCC--CGGGGGCTTC-SEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCEEECSSSCCTTCCEEECCS
T ss_pred CCEEECCCCCCCC--ChhhccCCCC-CEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCCCCcccccCCCCcEEECCC
Confidence 4555555555553 3567777788 688888888887778888888888888888888887655555566777777777
Q ss_pred CCc
Q 005226 272 NPL 274 (707)
Q Consensus 272 N~~ 274 (707)
|+.
T Consensus 311 N~l 313 (597)
T 3oja_B 311 NHL 313 (597)
T ss_dssp SCC
T ss_pred CCC
Confidence 653
No 284
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.91 E-value=2.2e-24 Score=233.11 Aligned_cols=201 Identities=19% Similarity=0.208 Sum_probs=119.0
Q ss_pred CcEEEEEcCCCCccccCCCCcCCCCCCCEEEcccCCcCCCCCccccCCCCCceEEecCccCCCCCCcccCCCCCccEEec
Q 005226 69 PRVVGVAISGKNVRGYIPSELGSLIYLRRLNLHNNNLFGSLPDQLFNATSLHSIFLYGNNLSGSLPPSVCNLPRLQNLDL 148 (707)
Q Consensus 69 ~~v~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 148 (707)
++++.|+|++|.+++..+..|..+++|++|+|++|++++..|..|.++++|++|+|++|+|+...+..|.++++|++|+|
T Consensus 69 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 148 (390)
T 3o6n_A 69 RQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSM 148 (390)
T ss_dssp CCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred ccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEEEC
Confidence 34556666666666555556666666666666666666555555666666666666666666333333466666666666
Q ss_pred cCCcccccCCCCCcccchhhhhhhcCCcccccCCCcccccC-------------------------------------CC
Q 005226 149 SNNSFSGSLPDGLKNCKQLQRLILARNKFSGQIPAGIWPEL-------------------------------------EN 191 (707)
Q Consensus 149 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~lp~~~~~~l-------------------------------------~~ 191 (707)
++|++++..|..|.++++|+.|+|++|+++ .++...+..+ ++
T Consensus 149 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~~~~~~l~~L~~L~l~~n~l~~~~~~~~L~~L~l~~n~l~~~~~~~~~~ 227 (390)
T 3o6n_A 149 SNNNLERIEDDTFQATTSLQNLQLSSNRLT-HVDLSLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVVRGPVNVE 227 (390)
T ss_dssp CSSCCCBCCTTTTSSCTTCCEEECCSSCCS-BCCGGGCTTCSEEECCSSCCSEEECCSSCSEEECCSSCCCEEECCCCSS
T ss_pred CCCccCccChhhccCCCCCCEEECCCCcCC-ccccccccccceeecccccccccCCCCcceEEECCCCeeeecccccccc
Confidence 666666555556666666666666666665 3332221111 13
Q ss_pred ccEEeccCCCCCCCCCcchhhhhccccEEEeccCcCcCCCCCcCCCCCCccEEEccCCcCcccCCCCCCCCCCCCcccCC
Q 005226 192 LVQLDLSDNDFKGPIPNDLGELQSLSATLNLSYNHLSGKIPKSLGNLPVTVSFDLRGNNLSGEIPQTGSFANQGPTAFLS 271 (707)
Q Consensus 192 L~~L~ls~N~l~~~~p~~~~~l~~L~~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~~~~~~~~~~~~ 271 (707)
|+.|+|++|++++. ..+..+++| ++|+|++|.+++..|..+..+++|+.|++++|++++..+....+.++..+.+.+
T Consensus 228 L~~L~l~~n~l~~~--~~l~~l~~L-~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~l~~L~~L~L~~ 304 (390)
T 3o6n_A 228 LTILKLQHNNLTDT--AWLLNYPGL-VEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVALNLYGQPIPTLKVLDLSH 304 (390)
T ss_dssp CCEEECCSSCCCCC--GGGGGCTTC-SEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCEEECSSSCCTTCCEEECCS
T ss_pred ccEEECCCCCCccc--HHHcCCCCc-cEEECCCCcCCCcChhHccccccCCEEECCCCcCcccCcccCCCCCCCEEECCC
Confidence 44444444444421 345666666 577777777776667777777777777777777776554444555666666666
Q ss_pred CC
Q 005226 272 NP 273 (707)
Q Consensus 272 N~ 273 (707)
|+
T Consensus 305 n~ 306 (390)
T 3o6n_A 305 NH 306 (390)
T ss_dssp SC
T ss_pred Cc
Confidence 54
No 285
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.90 E-value=1.3e-24 Score=248.83 Aligned_cols=210 Identities=18% Similarity=0.143 Sum_probs=188.5
Q ss_pred CcEEEEEcCCCCcccc--CCCCcCCCCCCCEEEcccCCcCCCCCccccCCCCCceEEecCccCCCCCC-cccCCCCCccE
Q 005226 69 PRVVGVAISGKNVRGY--IPSELGSLIYLRRLNLHNNNLFGSLPDQLFNATSLHSIFLYGNNLSGSLP-PSVCNLPRLQN 145 (707)
Q Consensus 69 ~~v~~L~L~~n~l~~~--~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~ 145 (707)
++++.|+|++|.+++. +|..+..+++|++|+|++|.+++ +|..+.++++|++|+|++|++.+..| ..|..+++|+.
T Consensus 350 ~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~ 428 (606)
T 3vq2_A 350 PSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAII-MSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLY 428 (606)
T ss_dssp TTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEE-ECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCE
T ss_pred CCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCcccc-chhhccCCCCCCeeECCCCccCCccChhhhhccccCCE
Confidence 6788999999999877 48889999999999999999984 67889999999999999999998877 68999999999
Q ss_pred EeccCCcccccCCCCCcccchhhhhhhcCCcccccCCCcccccCCCccEEeccCCCCCCCCCcchhhhhccccEEEeccC
Q 005226 146 LDLSNNSFSGSLPDGLKNCKQLQRLILARNKFSGQIPAGIWPELENLVQLDLSDNDFKGPIPNDLGELQSLSATLNLSYN 225 (707)
Q Consensus 146 L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~lp~~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~L~l~~N 225 (707)
|++++|++++..|..+.++++|+.|+|++|++++.++...|..+++|++|+|++|++++..|..|.++++| ++|+|++|
T Consensus 429 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L-~~L~Ls~N 507 (606)
T 3vq2_A 429 LDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRL-QLLNMSHN 507 (606)
T ss_dssp EECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTC-CEEECCSS
T ss_pred EECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccC-CEEECCCC
Confidence 99999999999999999999999999999999975444556899999999999999999999999999999 89999999
Q ss_pred cCcCCCCCcCCCCCCccEEEccCCcCcccCCCCCCCC-CCCCcccCCCCcccCCCC
Q 005226 226 HLSGKIPKSLGNLPVTVSFDLRGNNLSGEIPQTGSFA-NQGPTAFLSNPLLCGFPL 280 (707)
Q Consensus 226 ~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~~~-~~~~~~~~~N~~l~~~~~ 280 (707)
++++.+|..+..+++|+.|++++|+|+..++....+. ++..+.+.+||+.|+++.
T Consensus 508 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~p~~~~~l~~~L~~l~l~~N~~~c~c~~ 563 (606)
T 3vq2_A 508 NLLFLDSSHYNQLYSLSTLDCSFNRIETSKGILQHFPKSLAFFNLTNNSVACICEH 563 (606)
T ss_dssp CCSCEEGGGTTTCTTCCEEECTTSCCCCEESCGGGSCTTCCEEECCSCCCCCSSTT
T ss_pred cCCCcCHHHccCCCcCCEEECCCCcCcccCHhHhhhcccCcEEEccCCCcccCCcc
Confidence 9999889999999999999999999996555444554 478889999999998754
No 286
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.90 E-value=3.2e-24 Score=224.29 Aligned_cols=199 Identities=22% Similarity=0.263 Sum_probs=173.2
Q ss_pred cEEEEEcCCCCccccCCCCc--CCCCCCCEEEcccCCcCCCCC----ccccCCCCCceEEecCccCCCCCCcccCCCCCc
Q 005226 70 RVVGVAISGKNVRGYIPSEL--GSLIYLRRLNLHNNNLFGSLP----DQLFNATSLHSIFLYGNNLSGSLPPSVCNLPRL 143 (707)
Q Consensus 70 ~v~~L~L~~n~l~~~~~~~l--~~l~~L~~L~L~~N~l~~~~p----~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 143 (707)
+++.|+|++|++.+..|..+ ..+++|++|+|++|++++..+ ..+..+++|++|+|++|+|++..|..|..+++|
T Consensus 92 ~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L 171 (310)
T 4glp_A 92 RLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPAL 171 (310)
T ss_dssp CCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTC
T ss_pred ceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCCC
Confidence 59999999999999999998 999999999999999998666 455679999999999999998888999999999
Q ss_pred cEEeccCCccccc--C--CCCCcccchhhhhhhcCCcccccCCCc---ccccCCCccEEeccCCCCCCCCCcchhhh---
Q 005226 144 QNLDLSNNSFSGS--L--PDGLKNCKQLQRLILARNKFSGQIPAG---IWPELENLVQLDLSDNDFKGPIPNDLGEL--- 213 (707)
Q Consensus 144 ~~L~Ls~N~l~~~--~--p~~~~~l~~L~~L~l~~N~l~~~lp~~---~~~~l~~L~~L~ls~N~l~~~~p~~~~~l--- 213 (707)
++|+|++|++.+. + +..+.++++|++|+|++|+|+ .++.. ++..+++|++|+|++|+|++..|..+..+
T Consensus 172 ~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~ 250 (310)
T 4glp_A 172 TSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGME-TPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWS 250 (310)
T ss_dssp CEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCC-CHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCC
T ss_pred CEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCC-chHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccCc
Confidence 9999999998752 2 344578999999999999997 55543 56788999999999999998889888887
Q ss_pred hccccEEEeccCcCcCCCCCcCCCCCCccEEEccCCcCcccCCCCCCCCCCCCcccCCCCc
Q 005226 214 QSLSATLNLSYNHLSGKIPKSLGNLPVTVSFDLRGNNLSGEIPQTGSFANQGPTAFLSNPL 274 (707)
Q Consensus 214 ~~L~~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~~~~~~~~~~~~N~~ 274 (707)
++| ++|+|++|+|+ .+|..+. ++|+.|++++|+|++. |....+.++..+.+.+|++
T Consensus 251 ~~L-~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~~~~l~~L~~L~L~~N~l 306 (310)
T 4glp_A 251 SAL-NSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQPDELPEVDNLTLDGNPF 306 (310)
T ss_dssp TTC-CCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CCTTSCCCCSCEECSSTTT
T ss_pred CcC-CEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-chhhhCCCccEEECcCCCC
Confidence 688 79999999999 7888775 8999999999999974 3346778888899988875
No 287
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.90 E-value=2.3e-23 Score=210.72 Aligned_cols=178 Identities=22% Similarity=0.263 Sum_probs=161.5
Q ss_pred CCc--eeceeEeCC-----CCCCCCCcEEEEEcCCCCccccCCCCcCCCCCCCEEEcccCCcCCCCCccccCCCCCceEE
Q 005226 51 TPC--RWSGISCMN-----ITGFPDPRVVGVAISGKNVRGYIPSELGSLIYLRRLNLHNNNLFGSLPDQLFNATSLHSIF 123 (707)
Q Consensus 51 ~~C--~w~gv~c~~-----~~~~~~~~v~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 123 (707)
|.| .|..|.|.+ .+...+.+++.|+|++|++++..+..|.++++|++|+|++|+|++..|..|.++++|++|+
T Consensus 10 C~C~~~~~~l~~~~~~l~~~p~~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 89 (251)
T 3m19_A 10 CTCNEGKKEVDCQGKSLDSVPSGIPADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLG 89 (251)
T ss_dssp SEEEGGGTEEECTTCCCSSCCSCCCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEE
T ss_pred eEcCCCCeEEecCCCCccccCCCCCCCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEE
Confidence 556 467788864 3333447899999999999999999999999999999999999998888999999999999
Q ss_pred ecCccCCCCCCcccCCCCCccEEeccCCcccccCCCCCcccchhhhhhhcCCcccccCCCcccccCCCccEEeccCCCCC
Q 005226 124 LYGNNLSGSLPPSVCNLPRLQNLDLSNNSFSGSLPDGLKNCKQLQRLILARNKFSGQIPAGIWPELENLVQLDLSDNDFK 203 (707)
Q Consensus 124 L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~lp~~~~~~l~~L~~L~ls~N~l~ 203 (707)
|++|+|++..+..|..+++|++|+|++|+|++..+..|.++++|+.|+|++|+|+ .+|...|..+++|++|+|++|+|+
T Consensus 90 L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~L~L~~N~l~ 168 (251)
T 3m19_A 90 LANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQ-SIPAGAFDKLTNLQTLSLSTNQLQ 168 (251)
T ss_dssp CTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCS
T ss_pred CCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCC-ccCHHHcCcCcCCCEEECCCCcCC
Confidence 9999999888888999999999999999999777777899999999999999999 888887899999999999999999
Q ss_pred CCCCcchhhhhccccEEEeccCcCcCC
Q 005226 204 GPIPNDLGELQSLSATLNLSYNHLSGK 230 (707)
Q Consensus 204 ~~~p~~~~~l~~L~~~L~l~~N~l~~~ 230 (707)
+..+..|..+++| +.|+|++|.+++.
T Consensus 169 ~~~~~~~~~l~~L-~~L~l~~N~~~c~ 194 (251)
T 3m19_A 169 SVPHGAFDRLGKL-QTITLFGNQFDCS 194 (251)
T ss_dssp CCCTTTTTTCTTC-CEEECCSCCBCTT
T ss_pred ccCHHHHhCCCCC-CEEEeeCCceeCC
Confidence 8888899999999 7999999999854
No 288
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.90 E-value=1.6e-23 Score=239.93 Aligned_cols=179 Identities=23% Similarity=0.209 Sum_probs=155.8
Q ss_pred eceeEeCC-----CCCCCCCcEEEEEcCCCCccccCCCCcCCCCCCCEEEcccCCcCCCCCccccCCCCCceEEecCccC
Q 005226 55 WSGISCMN-----ITGFPDPRVVGVAISGKNVRGYIPSELGSLIYLRRLNLHNNNLFGSLPDQLFNATSLHSIFLYGNNL 129 (707)
Q Consensus 55 w~gv~c~~-----~~~~~~~~v~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l 129 (707)
+..|.|.+ .|...+.+++.|+|++|+|++..|..|+++++|++|+|++|+|++..|..|.++++|++|+|++|++
T Consensus 14 ~~~~~c~~~~l~~iP~~l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l 93 (606)
T 3t6q_A 14 NKTYNCENLGLNEIPGTLPNSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPL 93 (606)
T ss_dssp TTEEECTTSCCSSCCTTSCTTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCC
T ss_pred CceEECCCCCcccCcCCCCCcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcc
Confidence 34578864 3444557899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcccCCCCCccEEeccCCcccccCCCCCcccchhhhhhhcCCcccccCCCcccccCCCccEEeccCCCCCCCCCcc
Q 005226 130 SGSLPPSVCNLPRLQNLDLSNNSFSGSLPDGLKNCKQLQRLILARNKFSGQIPAGIWPELENLVQLDLSDNDFKGPIPND 209 (707)
Q Consensus 130 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~lp~~~~~~l~~L~~L~ls~N~l~~~~p~~ 209 (707)
++..|..|+++++|++|+|++|++++..|..+.++++|++|+|++|+++ .++...+..+++|++|+|++|++++..|..
T Consensus 94 ~~~~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 172 (606)
T 3t6q_A 94 IFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHIS-SIKLPKGFPTEKLKVLDFQNNAIHYLSKED 172 (606)
T ss_dssp SEECTTTTSSCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCC-CCCCCTTCCCTTCCEEECCSSCCCEECHHH
T ss_pred cccChhhhcccccccEeeccccCcccCCcchhccCCcccEEECCCCccc-ccCcccccCCcccCEEEcccCcccccChhh
Confidence 9888999999999999999999999777889999999999999999999 543222345999999999999999877888
Q ss_pred hhhhhcccc--EEEeccCcCcCCCCCcC
Q 005226 210 LGELQSLSA--TLNLSYNHLSGKIPKSL 235 (707)
Q Consensus 210 ~~~l~~L~~--~L~l~~N~l~~~~p~~~ 235 (707)
|..+++| + .|++++|.+++..|..+
T Consensus 173 ~~~l~~L-~~l~L~l~~n~l~~~~~~~~ 199 (606)
T 3t6q_A 173 MSSLQQA-TNLSLNLNGNDIAGIEPGAF 199 (606)
T ss_dssp HHTTTTC-CSEEEECTTCCCCEECTTTT
T ss_pred hhhhccc-ceeEEecCCCccCccChhHh
Confidence 8888888 6 68888888776666544
No 289
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.90 E-value=2.1e-24 Score=244.20 Aligned_cols=219 Identities=19% Similarity=0.204 Sum_probs=187.4
Q ss_pred CceeceeEeCC-------CCCCCCCcEEEEEcCCCCccccCCCCcCCCCCCCEEEcccCCcCCCCCccccCCCCCceEEe
Q 005226 52 PCRWSGISCMN-------ITGFPDPRVVGVAISGKNVRGYIPSELGSLIYLRRLNLHNNNLFGSLPDQLFNATSLHSIFL 124 (707)
Q Consensus 52 ~C~w~gv~c~~-------~~~~~~~~v~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 124 (707)
.|.|.|+ |+. .|.....+++.|+|++|++++..|..|.++++|++|+|++|+|++..|..|.++++|++|+|
T Consensus 3 ~C~~~~~-c~~~~~~l~~ip~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L 81 (549)
T 2z81_A 3 SCDASGV-CDGRSRSFTSIPSGLTAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDL 81 (549)
T ss_dssp EECTTSE-EECTTSCCSSCCSCCCTTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred cCCCCce-EECCCCccccccccCCCCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEEC
Confidence 5889888 752 23333468999999999999999999999999999999999999988899999999999999
Q ss_pred cCccCCCCCCcccCCCCCccEEeccCCcccc-cCCCCCcccchhhhhhhcCCcccccCCCcccccCCCccEEeccCCCCC
Q 005226 125 YGNNLSGSLPPSVCNLPRLQNLDLSNNSFSG-SLPDGLKNCKQLQRLILARNKFSGQIPAGIWPELENLVQLDLSDNDFK 203 (707)
Q Consensus 125 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~l~~N~l~~~lp~~~~~~l~~L~~L~ls~N~l~ 203 (707)
++|+|++..|..|+++++|++|+|++|++++ ..|..+.++++|++|++++|++.+.+|...|..+++|++|++++|+++
T Consensus 82 s~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~ 161 (549)
T 2z81_A 82 SDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLR 161 (549)
T ss_dssp TTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCC
T ss_pred CCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCccc
Confidence 9999998777789999999999999999996 367899999999999999999666898877899999999999999999
Q ss_pred CCCCcchhhhhccccEEEeccCcCcCCCCCcC-CCCCCccEEEccCCcCcccC----CCCCCCCCCCCcccCCCC
Q 005226 204 GPIPNDLGELQSLSATLNLSYNHLSGKIPKSL-GNLPVTVSFDLRGNNLSGEI----PQTGSFANQGPTAFLSNP 273 (707)
Q Consensus 204 ~~~p~~~~~l~~L~~~L~l~~N~l~~~~p~~~-~~l~~L~~l~l~~N~l~~~~----p~~~~~~~~~~~~~~~N~ 273 (707)
+..|..+..+++| +.|++++|.+. .+|..+ ..+++|+.|++++|++++.. +......++..+.+.+|.
T Consensus 162 ~~~~~~l~~l~~L-~~L~l~~n~~~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~ 234 (549)
T 2z81_A 162 NYQSQSLKSIRDI-HHLTLHLSESA-FLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSV 234 (549)
T ss_dssp EECTTTTTTCSEE-EEEEEECSBST-THHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCE
T ss_pred ccChhhhhccccC-ceEecccCccc-ccchhhHhhcccccEEEccCCccccccccccchhhhhhcccceeccccc
Confidence 9999999999999 79999999987 455443 56899999999999999842 222234455555555553
No 290
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.90 E-value=4.9e-24 Score=236.78 Aligned_cols=209 Identities=21% Similarity=0.193 Sum_probs=166.2
Q ss_pred CcEEEEEcCCCCccccCCCCcCCCCCCCEEEcccCCcCCCCCccccCCCCCceEEecCccCCCCCCcccCCCCCccEEec
Q 005226 69 PRVVGVAISGKNVRGYIPSELGSLIYLRRLNLHNNNLFGSLPDQLFNATSLHSIFLYGNNLSGSLPPSVCNLPRLQNLDL 148 (707)
Q Consensus 69 ~~v~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 148 (707)
.+++.|+|++|.+.+..|..|..+++|++|+|++|.+++..|..|.++++|++|+|++|++++..+..|.++++|+.|+|
T Consensus 104 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l 183 (477)
T 2id5_A 104 SNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRL 183 (477)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEE
T ss_pred CCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeC
Confidence 57888888888888877888888888888888888888777777888888888888888887655556777777777777
Q ss_pred cCCcccccCCCCCcccch------------------------hhhhhhcCCcccccCCCcccccCCCccEEeccCCCCCC
Q 005226 149 SNNSFSGSLPDGLKNCKQ------------------------LQRLILARNKFSGQIPAGIWPELENLVQLDLSDNDFKG 204 (707)
Q Consensus 149 s~N~l~~~~p~~~~~l~~------------------------L~~L~l~~N~l~~~lp~~~~~~l~~L~~L~ls~N~l~~ 204 (707)
++|.+++..+..|.++++ |+.|+|++|+|+ .+|...|..+++|+.|+|++|+|++
T Consensus 184 ~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~Ls~n~l~~ 262 (477)
T 2id5_A 184 RHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLT-AVPYLAVRHLVYLRFLNLSYNPIST 262 (477)
T ss_dssp ESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCC-SCCHHHHTTCTTCCEEECCSSCCCE
T ss_pred CCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCccc-ccCHHHhcCccccCeeECCCCcCCc
Confidence 777777665556665554 455555556666 6676667888999999999999998
Q ss_pred CCCcchhhhhccccEEEeccCcCcCCCCCcCCCCCCccEEEccCCcCcccCCCC-CCCCCCCCcccCCCCcccCCC
Q 005226 205 PIPNDLGELQSLSATLNLSYNHLSGKIPKSLGNLPVTVSFDLRGNNLSGEIPQT-GSFANQGPTAFLSNPLLCGFP 279 (707)
Q Consensus 205 ~~p~~~~~l~~L~~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~-~~~~~~~~~~~~~N~~l~~~~ 279 (707)
..+..|.++++| +.|+|++|++++..|..|..+++|+.|++++|+|++..+.. ..+.++..+.+.+||+.|.++
T Consensus 263 ~~~~~~~~l~~L-~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~c~c~ 337 (477)
T 2id5_A 263 IEGSMLHELLRL-QEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLACDCR 337 (477)
T ss_dssp ECTTSCTTCTTC-CEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSSCEECSGG
T ss_pred cChhhccccccC-CEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccCCCccCccc
Confidence 777889999999 79999999999888999999999999999999999876642 455678888999999988754
No 291
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.90 E-value=1.2e-24 Score=241.62 Aligned_cols=203 Identities=22% Similarity=0.156 Sum_probs=148.3
Q ss_pred CcEEEEEcCCCCccccCCCCcCCCCCCCEEEcccCCcCCCCCccccCCCCCceEEecCccCCCCCCc-------------
Q 005226 69 PRVVGVAISGKNVRGYIPSELGSLIYLRRLNLHNNNLFGSLPDQLFNATSLHSIFLYGNNLSGSLPP------------- 135 (707)
Q Consensus 69 ~~v~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~------------- 135 (707)
++++.|+|++|++++..|..|..+++|++|+|++|.|++..| |..+++|++|+|++|.|++..+.
T Consensus 34 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~~~~L~~L~L~~N~l 111 (487)
T 3oja_A 34 WNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLVGPSIETLHAANNNI 111 (487)
T ss_dssp GGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEECTTCCEEECCSSCC
T ss_pred CCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCCCCCcCEEECcCCcC
Confidence 478888888888888777788888888888888888876555 77788888777777777632211
Q ss_pred ---ccCCCCCccEEeccCCcccccCCCCCcccchhhhhhhcCCcccccCCCcccccCCCccEEeccCCCCCCCCCcchhh
Q 005226 136 ---SVCNLPRLQNLDLSNNSFSGSLPDGLKNCKQLQRLILARNKFSGQIPAGIWPELENLVQLDLSDNDFKGPIPNDLGE 212 (707)
Q Consensus 136 ---~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~lp~~~~~~l~~L~~L~ls~N~l~~~~p~~~~~ 212 (707)
....+++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++.+|..++..+++|++|+|++|.|++. | .+..
T Consensus 112 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~-~-~~~~ 189 (487)
T 3oja_A 112 SRVSCSRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-K-GQVV 189 (487)
T ss_dssp CCEEECCCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-E-CCCC
T ss_pred CCCCccccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccc-c-cccc
Confidence 0123567777888888887777777788888888888888887666666555778888888888888754 2 2334
Q ss_pred hhccccEEEeccCcCcCCCCCcCCCCCCccEEEccCCcCcccCCCCCCCCCCCCcccCCCCcccC
Q 005226 213 LQSLSATLNLSYNHLSGKIPKSLGNLPVTVSFDLRGNNLSGEIPQTGSFANQGPTAFLSNPLLCG 277 (707)
Q Consensus 213 l~~L~~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~~~~~~~~~~~~N~~l~~ 277 (707)
+++| +.|+|++|.|++ +|..+..+++|+.|++++|+|++.++....+.++..+.+.+|++.|+
T Consensus 190 l~~L-~~L~Ls~N~l~~-~~~~~~~l~~L~~L~Ls~N~l~~lp~~l~~l~~L~~L~l~~N~l~c~ 252 (487)
T 3oja_A 190 FAKL-KTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLVLIEKALRFSQNLEHFDLRGNGFHCG 252 (487)
T ss_dssp CTTC-CEEECCSSCCCE-ECGGGGGGTTCSEEECTTSCCCEECTTCCCCTTCCEEECTTCCBCHH
T ss_pred CCCC-CEEECCCCCCCC-CCHhHcCCCCccEEEecCCcCcccchhhccCCCCCEEEcCCCCCcCc
Confidence 7777 688888888885 44447778888888888888887655555666777777788877765
No 292
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.89 E-value=1.7e-23 Score=214.46 Aligned_cols=178 Identities=24% Similarity=0.264 Sum_probs=165.0
Q ss_pred CcEEEEEcCCCCccccCCCCcCCCCCCCEEEcccCCcCCCCCccccCCCCCceEEecCccCCCCCCcccCCCCCccEEec
Q 005226 69 PRVVGVAISGKNVRGYIPSELGSLIYLRRLNLHNNNLFGSLPDQLFNATSLHSIFLYGNNLSGSLPPSVCNLPRLQNLDL 148 (707)
Q Consensus 69 ~~v~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 148 (707)
++++.|+|++|++++. +.+..+++|++|+|++|.|++..+..|.++++|++|+|++|+|++..+..|..+++|+.|+|
T Consensus 63 ~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 140 (272)
T 3rfs_A 63 PNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNL 140 (272)
T ss_dssp TTCCEEECTTSCCCCC--GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEECCCCCCCCc--hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEEC
Confidence 6899999999999974 48999999999999999999888888999999999999999999888888999999999999
Q ss_pred cCCcccccCCCCCcccchhhhhhhcCCcccccCCCcccccCCCccEEeccCCCCCCCCCcchhhhhccccEEEeccCcCc
Q 005226 149 SNNSFSGSLPDGLKNCKQLQRLILARNKFSGQIPAGIWPELENLVQLDLSDNDFKGPIPNDLGELQSLSATLNLSYNHLS 228 (707)
Q Consensus 149 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~lp~~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~L~l~~N~l~ 228 (707)
++|++++..+..|.++++|+.|+|++|+|+ .+|...|..+++|++|+|++|+|++..|..+..+++| +.|+|++|.+.
T Consensus 141 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L-~~L~l~~N~~~ 218 (272)
T 3rfs_A 141 AHNQLQSLPKGVFDKLTNLTELDLSYNQLQ-SLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSL-QYIWLHDNPWD 218 (272)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTC-CEEECCSSCBC
T ss_pred CCCccCccCHHHhccCccCCEEECCCCCcC-ccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCC-CEEEccCCCcc
Confidence 999999877788899999999999999999 7888888899999999999999998888889999999 79999999998
Q ss_pred CCCCCcCCCCCCccEEEccCCcCcccCCC
Q 005226 229 GKIPKSLGNLPVTVSFDLRGNNLSGEIPQ 257 (707)
Q Consensus 229 ~~~p~~~~~l~~L~~l~l~~N~l~~~~p~ 257 (707)
+ .+++|+.|++..|+++|.+|.
T Consensus 219 ~-------~~~~l~~l~~~~n~~~g~ip~ 240 (272)
T 3rfs_A 219 C-------TCPGIRYLSEWINKHSGVVRN 240 (272)
T ss_dssp C-------CTTTTHHHHHHHHHTGGGBBC
T ss_pred c-------cCcHHHHHHHHHHhCCCcccC
Confidence 6 456789999999999999994
No 293
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.89 E-value=4.2e-24 Score=222.87 Aligned_cols=184 Identities=21% Similarity=0.250 Sum_probs=168.2
Q ss_pred CcEEEEEcCCCCccccCCCCcCCCCCCCEEEcccCCcCCCCC-ccccCCCCCceEEecCccCCCCCCcccCCCCCccEEe
Q 005226 69 PRVVGVAISGKNVRGYIPSELGSLIYLRRLNLHNNNLFGSLP-DQLFNATSLHSIFLYGNNLSGSLPPSVCNLPRLQNLD 147 (707)
Q Consensus 69 ~~v~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 147 (707)
.+++.|+|++|.+.+ +|..+..+++|++|+|++|++++..+ ..+.++++|++|+|++|++++..|..|..+++|+.|+
T Consensus 78 ~~L~~L~Ls~n~i~~-l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 156 (306)
T 2z66_A 78 TSLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLK 156 (306)
T ss_dssp SCCCEEECCSCSEEE-EEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEE
T ss_pred cccCEEECCCCcccc-ChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEE
Confidence 678899999999885 56779999999999999999997655 6899999999999999999988999999999999999
Q ss_pred ccCCcccc-cCCCCCcccchhhhhhhcCCcccccCCCcccccCCCccEEeccCCCCCCCCCcchhhhhccccEEEeccCc
Q 005226 148 LSNNSFSG-SLPDGLKNCKQLQRLILARNKFSGQIPAGIWPELENLVQLDLSDNDFKGPIPNDLGELQSLSATLNLSYNH 226 (707)
Q Consensus 148 Ls~N~l~~-~~p~~~~~l~~L~~L~l~~N~l~~~lp~~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~L~l~~N~ 226 (707)
|++|++++ .+|..+..+++|+.|+|++|+|+ .++...|..+++|++|+|++|+|++..+..+..+++| +.|+|++|+
T Consensus 157 l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L-~~L~L~~N~ 234 (306)
T 2z66_A 157 MAGNSFQENFLPDIFTELRNLTFLDLSQCQLE-QLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSL-QVLDYSLNH 234 (306)
T ss_dssp CTTCEEGGGEECSCCTTCTTCCEEECTTSCCC-EECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTC-CEEECTTSC
T ss_pred CCCCccccccchhHHhhCcCCCEEECCCCCcC-CcCHHHhcCCCCCCEEECCCCccCccChhhccCcccC-CEeECCCCC
Confidence 99999997 68999999999999999999999 5655566899999999999999998777789999999 899999999
Q ss_pred CcCCCCCcCCCCC-CccEEEccCCcCcccC
Q 005226 227 LSGKIPKSLGNLP-VTVSFDLRGNNLSGEI 255 (707)
Q Consensus 227 l~~~~p~~~~~l~-~L~~l~l~~N~l~~~~ 255 (707)
+++..|..+..++ +|+.|++++|++++..
T Consensus 235 l~~~~~~~~~~~~~~L~~L~L~~N~~~~~c 264 (306)
T 2z66_A 235 IMTSKKQELQHFPSSLAFLNLTQNDFACTC 264 (306)
T ss_dssp CCBCSSSSCCCCCTTCCEEECTTCCEECSG
T ss_pred CcccCHHHHHhhhccCCEEEccCCCeeccc
Confidence 9999999999995 9999999999999754
No 294
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.89 E-value=8.2e-24 Score=242.26 Aligned_cols=209 Identities=23% Similarity=0.215 Sum_probs=159.6
Q ss_pred CcEEEEEcCCCCccccC--CCCcCCCCCCCEEEcccCCcCCCCCccccCCCCCceEEecCccCCCCCCcc-cCCCCCccE
Q 005226 69 PRVVGVAISGKNVRGYI--PSELGSLIYLRRLNLHNNNLFGSLPDQLFNATSLHSIFLYGNNLSGSLPPS-VCNLPRLQN 145 (707)
Q Consensus 69 ~~v~~L~L~~n~l~~~~--~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~-~~~l~~L~~ 145 (707)
++++.|+|++|.+.+.. +..+..+++|++|+|++|++++..|..|.++++|++|+|++|++++..|.. +..+++|+.
T Consensus 350 ~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~ 429 (606)
T 3t6q_A 350 ENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKV 429 (606)
T ss_dssp TTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCE
T ss_pred CcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccCCE
Confidence 46777777777777665 666777777777777777777777777777778888888888777665544 777888888
Q ss_pred EeccCCcccccCCCCCcccchhhhhhhcCCccccc-CC-CcccccCCCccEEeccCCCCCCCCCcchhhhhccccEEEec
Q 005226 146 LDLSNNSFSGSLPDGLKNCKQLQRLILARNKFSGQ-IP-AGIWPELENLVQLDLSDNDFKGPIPNDLGELQSLSATLNLS 223 (707)
Q Consensus 146 L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~-lp-~~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~L~l~ 223 (707)
|+|++|.+++..|..+.++++|+.|+|++|++++. +| ...+..+++|++|+|++|++++..|..|.++++| ++|+|+
T Consensus 430 L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L-~~L~Ls 508 (606)
T 3t6q_A 430 LNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMM-NHVDLS 508 (606)
T ss_dssp EECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTC-CEEECC
T ss_pred EECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCC-CEEECC
Confidence 88888888877777788888888888888888742 22 2446778888888888888887778888888888 788888
Q ss_pred cCcCcCCCCCcCCCCCCccEEEccCCcCcccCCCC-CCCCCCCCcccCCCCcccCCC
Q 005226 224 YNHLSGKIPKSLGNLPVTVSFDLRGNNLSGEIPQT-GSFANQGPTAFLSNPLLCGFP 279 (707)
Q Consensus 224 ~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~-~~~~~~~~~~~~~N~~l~~~~ 279 (707)
+|++++..|..+..++.| .|++++|++++.+|.. ..+.++..+.+.+||+.|.++
T Consensus 509 ~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 564 (606)
T 3t6q_A 509 HNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNPLDCTCS 564 (606)
T ss_dssp SSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECSGG
T ss_pred CCccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCCccccCC
Confidence 888888888888888888 8888888888777642 345667788888898888643
No 295
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.89 E-value=2.2e-23 Score=225.32 Aligned_cols=201 Identities=21% Similarity=0.200 Sum_probs=166.0
Q ss_pred CcEEEEEcCCCCccccCCCCcCCCCCCCEEEcccCCcCCCCCccccCCCCCceEEecCccCCCCCCcccCCCCCccEEec
Q 005226 69 PRVVGVAISGKNVRGYIPSELGSLIYLRRLNLHNNNLFGSLPDQLFNATSLHSIFLYGNNLSGSLPPSVCNLPRLQNLDL 148 (707)
Q Consensus 69 ~~v~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 148 (707)
.+++.|+|++|++++..|..|+++++|++|+|++|+|+...+..|.++++|++|+|++|++++..|..|..+++|+.|+|
T Consensus 93 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 172 (390)
T 3o6n_A 93 HTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQL 172 (390)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEEC
T ss_pred CCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEEC
Confidence 68999999999999998999999999999999999999655555789999999999999999888888999999999999
Q ss_pred cCCcccccCCCCCccc-------------------------------------chhhhhhhcCCcccccCCCcccccCCC
Q 005226 149 SNNSFSGSLPDGLKNC-------------------------------------KQLQRLILARNKFSGQIPAGIWPELEN 191 (707)
Q Consensus 149 s~N~l~~~~p~~~~~l-------------------------------------~~L~~L~l~~N~l~~~lp~~~~~~l~~ 191 (707)
++|++++.....+.++ ++|+.|+|++|+++ .+ ..+..+++
T Consensus 173 ~~n~l~~~~~~~l~~L~~L~l~~n~l~~~~~~~~L~~L~l~~n~l~~~~~~~~~~L~~L~l~~n~l~-~~--~~l~~l~~ 249 (390)
T 3o6n_A 173 SSNRLTHVDLSLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVVRGPVNVELTILKLQHNNLT-DT--AWLLNYPG 249 (390)
T ss_dssp CSSCCSBCCGGGCTTCSEEECCSSCCSEEECCSSCSEEECCSSCCCEEECCCCSSCCEEECCSSCCC-CC--GGGGGCTT
T ss_pred CCCcCCccccccccccceeecccccccccCCCCcceEEECCCCeeeeccccccccccEEECCCCCCc-cc--HHHcCCCC
Confidence 9999985432222222 24555566666665 23 23578899
Q ss_pred ccEEeccCCCCCCCCCcchhhhhccccEEEeccCcCcCCCCCcCCCCCCccEEEccCCcCcccCCCCCCCCCCCCcccCC
Q 005226 192 LVQLDLSDNDFKGPIPNDLGELQSLSATLNLSYNHLSGKIPKSLGNLPVTVSFDLRGNNLSGEIPQTGSFANQGPTAFLS 271 (707)
Q Consensus 192 L~~L~ls~N~l~~~~p~~~~~l~~L~~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~~~~~~~~~~~~ 271 (707)
|++|+|++|.+++..|..|.++++| ++|+|++|++++ +|..+..+++|+.|++++|++++.++....+.++..+.+.+
T Consensus 250 L~~L~Ls~n~l~~~~~~~~~~l~~L-~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~l~~L~~L~L~~ 327 (390)
T 3o6n_A 250 LVEVDLSYNELEKIMYHPFVKMQRL-ERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLLHVERNQPQFDRLENLYLDH 327 (390)
T ss_dssp CSEEECCSSCCCEEESGGGTTCSSC-CEEECCSSCCCE-EECSSSCCTTCCEEECCSSCCCCCGGGHHHHTTCSEEECCS
T ss_pred ccEEECCCCcCCCcChhHccccccC-CEEECCCCcCcc-cCcccCCCCCCCEEECCCCcceecCccccccCcCCEEECCC
Confidence 9999999999998888999999999 799999999984 67777889999999999999987665555667777777777
Q ss_pred CCc
Q 005226 272 NPL 274 (707)
Q Consensus 272 N~~ 274 (707)
|+.
T Consensus 328 N~i 330 (390)
T 3o6n_A 328 NSI 330 (390)
T ss_dssp SCC
T ss_pred Ccc
Confidence 763
No 296
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.89 E-value=2.3e-23 Score=241.86 Aligned_cols=209 Identities=22% Similarity=0.219 Sum_probs=156.2
Q ss_pred CcEEEEEcCCCCccccCCCCcCCCCCCCEEEcccCCcCCCCC-ccccCCCCCceEEecCccCC-----------------
Q 005226 69 PRVVGVAISGKNVRGYIPSELGSLIYLRRLNLHNNNLFGSLP-DQLFNATSLHSIFLYGNNLS----------------- 130 (707)
Q Consensus 69 ~~v~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~----------------- 130 (707)
.+++.|+|++|++++..|..|..+++|+.|+|++|.+++.+| ..|.++++|++|+|++|++.
T Consensus 381 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~ 460 (680)
T 1ziw_A 381 SPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLM 460 (680)
T ss_dssp SCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEE
T ss_pred CcCceEECCCCCCCeEChhhhhCCCCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccch
Confidence 356667777777776666666667777777777776665444 45555666666666655543
Q ss_pred ---------CCCCcccCCCCCccEEeccCCcccccCCCCCcccchhhhhhhcCCcccccCC--------CcccccCCCcc
Q 005226 131 ---------GSLPPSVCNLPRLQNLDLSNNSFSGSLPDGLKNCKQLQRLILARNKFSGQIP--------AGIWPELENLV 193 (707)
Q Consensus 131 ---------~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~lp--------~~~~~~l~~L~ 193 (707)
+.+|..|.++++|+.|+|++|+|++..|..|.++++|+.|+|++|+++ .++ ...|..+++|+
T Consensus 461 l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~-~~~~~~~~~~~~~~~~~l~~L~ 539 (680)
T 1ziw_A 461 LRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLA-RLWKHANPGGPIYFLKGLSHLH 539 (680)
T ss_dssp CTTSCCBCTTCSSCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCG-GGGSTTSTTSCCCTTTTCTTCC
T ss_pred hccccccccccCCcccccCCCCCEEECCCCCCCcCChhhhccccccCEEeCCCCCcc-ccchhhccCCcchhhcCCCCCC
Confidence 356777788888888888888888776777888888888888888887 332 22367788889
Q ss_pred EEeccCCCCCCCCCcchhhhhccccEEEeccCcCcCCCCCcCCCCCCccEEEccCCcCcccCCCCC--CCCCCCCcccCC
Q 005226 194 QLDLSDNDFKGPIPNDLGELQSLSATLNLSYNHLSGKIPKSLGNLPVTVSFDLRGNNLSGEIPQTG--SFANQGPTAFLS 271 (707)
Q Consensus 194 ~L~ls~N~l~~~~p~~~~~l~~L~~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~--~~~~~~~~~~~~ 271 (707)
+|+|++|+|+...+..|.++++| +.|+|++|+|++..+..|..+++|+.|++++|+|++.+|... .+.++..+.+.+
T Consensus 540 ~L~L~~N~l~~i~~~~~~~l~~L-~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~ 618 (680)
T 1ziw_A 540 ILNLESNGFDEIPVEVFKDLFEL-KIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRF 618 (680)
T ss_dssp EEECCSSCCCCCCTTTTTTCTTC-CEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTT
T ss_pred EEECCCCCCCCCCHHHcccccCc-ceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccC
Confidence 99999999885444568889999 799999999997777778889999999999999998776422 466788889999
Q ss_pred CCcccCCC
Q 005226 272 NPLLCGFP 279 (707)
Q Consensus 272 N~~l~~~~ 279 (707)
||+.|+++
T Consensus 619 N~~~c~c~ 626 (680)
T 1ziw_A 619 NPFDCTCE 626 (680)
T ss_dssp CCCCBCCC
T ss_pred CCcccCCc
Confidence 99999865
No 297
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.89 E-value=4.7e-23 Score=235.94 Aligned_cols=200 Identities=22% Similarity=0.246 Sum_probs=175.5
Q ss_pred CCceec----eeEeCC-----CCCCCCCcEEEEEcCCCCccccCCCCcCCCCCCCEEEcccCCcCCCCCccccCCCCCce
Q 005226 51 TPCRWS----GISCMN-----ITGFPDPRVVGVAISGKNVRGYIPSELGSLIYLRRLNLHNNNLFGSLPDQLFNATSLHS 121 (707)
Q Consensus 51 ~~C~w~----gv~c~~-----~~~~~~~~v~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 121 (707)
+||.|. .|.|.+ .|...+.+++.|+|++|++++..+..|.++++|++|+|++|+|++..|..|.++++|++
T Consensus 5 ~~c~~~~~~~~~~c~~~~l~~ip~~~~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~ 84 (606)
T 3vq2_A 5 NPCIEVVPNITYQCMDQKLSKVPDDIPSSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSN 84 (606)
T ss_dssp -CCEEEETTTEEECTTSCCSSCCTTSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCE
T ss_pred CCceecCCCCceEccCCCcccCCCCCCCCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCE
Confidence 556653 578864 34344578999999999999999999999999999999999999888999999999999
Q ss_pred EEecCccCCCCCCcccCCCCCccEEeccCCcccccCCCCCcccchhhhhhhcCCcccc-cCCCcccccCCCccEEeccCC
Q 005226 122 IFLYGNNLSGSLPPSVCNLPRLQNLDLSNNSFSGSLPDGLKNCKQLQRLILARNKFSG-QIPAGIWPELENLVQLDLSDN 200 (707)
Q Consensus 122 L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~-~lp~~~~~~l~~L~~L~ls~N 200 (707)
|+|++|+|++..|..|+++++|++|+|++|++++..|..|.++++|++|+|++|++++ .+|.. |..+++|++|+|++|
T Consensus 85 L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~-~~~l~~L~~L~Ls~n 163 (606)
T 3vq2_A 85 LILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAY-FSNLTNLVHVDLSYN 163 (606)
T ss_dssp EECTTCCCCCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGG-GGTCTTCCEEECCSS
T ss_pred eECCCCcccccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeCCCCcccceechHh-HhhcCCCCEEEccCC
Confidence 9999999998889999999999999999999997777899999999999999999984 46765 579999999999999
Q ss_pred CCCCCCCcchhhhhccc---cEEEeccCcCcCCCCCcCCCCCCccEEEccCCcCc
Q 005226 201 DFKGPIPNDLGELQSLS---ATLNLSYNHLSGKIPKSLGNLPVTVSFDLRGNNLS 252 (707)
Q Consensus 201 ~l~~~~p~~~~~l~~L~---~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~ 252 (707)
++++..|..+..+++|. .+|++++|.+++..+..+.. .+|+.|++++|.++
T Consensus 164 ~l~~~~~~~~~~l~~L~~~l~~L~l~~n~l~~~~~~~~~~-~~L~~L~L~~n~~~ 217 (606)
T 3vq2_A 164 YIQTITVNDLQFLRENPQVNLSLDMSLNPIDFIQDQAFQG-IKLHELTLRGNFNS 217 (606)
T ss_dssp CCCEECTTTTHHHHHCTTCCCEEECTTCCCCEECTTTTTT-CEEEEEEEESCCSC
T ss_pred cceecChhhhhhhhccccccceeeccCCCcceeCcccccC-ceeeeeeccCCccc
Confidence 99998888999988771 28999999999665555554 48999999999886
No 298
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.89 E-value=8.3e-23 Score=215.68 Aligned_cols=202 Identities=20% Similarity=0.265 Sum_probs=169.3
Q ss_pred CcEEEEEcCCCCccccCCCCcCCCCCCCEEEcccCCcCCCCCccccCCCCCceEEecCccCCCCCCcccCCCCCccEEec
Q 005226 69 PRVVGVAISGKNVRGYIPSELGSLIYLRRLNLHNNNLFGSLPDQLFNATSLHSIFLYGNNLSGSLPPSVCNLPRLQNLDL 148 (707)
Q Consensus 69 ~~v~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 148 (707)
++++.|+|++|++++..|..|.++++|++|+|++|+|+ .+|..+. ++|++|+|++|+|++..+..|..+++|+.|+|
T Consensus 78 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l 154 (332)
T 2ft3_A 78 QHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEM 154 (332)
T ss_dssp TTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSSCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEEC
T ss_pred CCCcEEECCCCccCccCHhHhhCcCCCCEEECCCCcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEEC
Confidence 68999999999999998999999999999999999998 5666555 78899999999888666667888888888888
Q ss_pred cCCcccc--cCCCCCccc--------------------chhhhhhhcCCcccccCCCcccccCCCccEEeccCCCCCCCC
Q 005226 149 SNNSFSG--SLPDGLKNC--------------------KQLQRLILARNKFSGQIPAGIWPELENLVQLDLSDNDFKGPI 206 (707)
Q Consensus 149 s~N~l~~--~~p~~~~~l--------------------~~L~~L~l~~N~l~~~lp~~~~~~l~~L~~L~ls~N~l~~~~ 206 (707)
++|.++. ..|..+..+ ++|+.|+|++|+++ .++...|..+++|++|+|++|+|++..
T Consensus 155 ~~n~l~~~~~~~~~~~~l~L~~L~l~~n~l~~l~~~~~~~L~~L~l~~n~i~-~~~~~~l~~l~~L~~L~L~~N~l~~~~ 233 (332)
T 2ft3_A 155 GGNPLENSGFEPGAFDGLKLNYLRISEAKLTGIPKDLPETLNELHLDHNKIQ-AIELEDLLRYSKLYRLGLGHNQIRMIE 233 (332)
T ss_dssp CSCCCBGGGSCTTSSCSCCCSCCBCCSSBCSSCCSSSCSSCSCCBCCSSCCC-CCCTTSSTTCTTCSCCBCCSSCCCCCC
T ss_pred CCCccccCCCCcccccCCccCEEECcCCCCCccCccccCCCCEEECCCCcCC-ccCHHHhcCCCCCCEEECCCCcCCcCC
Confidence 8888852 455555443 57889999999999 666666789999999999999999888
Q ss_pred CcchhhhhccccEEEeccCcCcCCCCCcCCCCCCccEEEccCCcCcccCCCCCC-------CCCCCCcccCCCCccc
Q 005226 207 PNDLGELQSLSATLNLSYNHLSGKIPKSLGNLPVTVSFDLRGNNLSGEIPQTGS-------FANQGPTAFLSNPLLC 276 (707)
Q Consensus 207 p~~~~~l~~L~~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~-------~~~~~~~~~~~N~~l~ 276 (707)
+..+..+++| ++|+|++|+|+ .+|..+..+++|+.|++++|++++..+.... ...+..+.+.+||+.+
T Consensus 234 ~~~~~~l~~L-~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~ 308 (332)
T 2ft3_A 234 NGSLSFLPTL-RELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPY 308 (332)
T ss_dssp TTGGGGCTTC-CEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCG
T ss_pred hhHhhCCCCC-CEEECCCCcCe-ecChhhhcCccCCEEECCCCCCCccChhHccccccccccccccceEeecCcccc
Confidence 8899999999 89999999999 8999999999999999999999977653221 2345567788888654
No 299
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.89 E-value=2.6e-23 Score=237.41 Aligned_cols=201 Identities=21% Similarity=0.199 Sum_probs=164.5
Q ss_pred CcEEEEEcCCCCccccCCCCcCCCCCCCEEEcccCCcCCCCCccccCCCCCceEEecCccCCCCCCcccCCCCCccEEec
Q 005226 69 PRVVGVAISGKNVRGYIPSELGSLIYLRRLNLHNNNLFGSLPDQLFNATSLHSIFLYGNNLSGSLPPSVCNLPRLQNLDL 148 (707)
Q Consensus 69 ~~v~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 148 (707)
.+++.|+|++|.+++..|..|+++++|++|+|++|.|++..+..|.++++|++|+|++|.|++..|..|..+++|+.|+|
T Consensus 99 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 178 (597)
T 3oja_B 99 HTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQL 178 (597)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEEC
Confidence 58999999999999999999999999999999999999766667899999999999999999888999999999999999
Q ss_pred cCCcccccCCCCCccc-------------------------------------chhhhhhhcCCcccccCCCcccccCCC
Q 005226 149 SNNSFSGSLPDGLKNC-------------------------------------KQLQRLILARNKFSGQIPAGIWPELEN 191 (707)
Q Consensus 149 s~N~l~~~~p~~~~~l-------------------------------------~~L~~L~l~~N~l~~~lp~~~~~~l~~ 191 (707)
++|.|++..+..+.++ ++|+.|+|++|++++ + ..+..+++
T Consensus 179 ~~N~l~~~~~~~l~~L~~L~l~~n~l~~l~~~~~L~~L~ls~n~l~~~~~~~~~~L~~L~L~~n~l~~-~--~~l~~l~~ 255 (597)
T 3oja_B 179 SSNRLTHVDLSLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVVRGPVNVELTILKLQHNNLTD-T--AWLLNYPG 255 (597)
T ss_dssp TTSCCSBCCGGGCTTCSEEECCSSCCSEEECCTTCSEEECCSSCCCEEECSCCSCCCEEECCSSCCCC-C--GGGGGCTT
T ss_pred cCCCCCCcChhhhhhhhhhhcccCccccccCCchhheeeccCCcccccccccCCCCCEEECCCCCCCC-C--hhhccCCC
Confidence 9999986533322222 134555555555552 2 23578899
Q ss_pred ccEEeccCCCCCCCCCcchhhhhccccEEEeccCcCcCCCCCcCCCCCCccEEEccCCcCcccCCCCCCCCCCCCcccCC
Q 005226 192 LVQLDLSDNDFKGPIPNDLGELQSLSATLNLSYNHLSGKIPKSLGNLPVTVSFDLRGNNLSGEIPQTGSFANQGPTAFLS 271 (707)
Q Consensus 192 L~~L~ls~N~l~~~~p~~~~~l~~L~~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~~~~~~~~~~~~ 271 (707)
|+.|+|++|.|++..|..|.++++| +.|+|++|.|++ +|..+..+++|+.|+|++|++++.++....+.++..+.+.+
T Consensus 256 L~~L~Ls~N~l~~~~~~~~~~l~~L-~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~l~~L~~L~L~~ 333 (597)
T 3oja_B 256 LVEVDLSYNELEKIMYHPFVKMQRL-ERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLLHVERNQPQFDRLENLYLDH 333 (597)
T ss_dssp CSEEECCSSCCCEEESGGGTTCSSC-CEEECTTSCCCE-EECSSSCCTTCCEEECCSSCCCCCGGGHHHHTTCSEEECCS
T ss_pred CCEEECCCCccCCCCHHHhcCccCC-CEEECCCCCCCC-CCcccccCCCCcEEECCCCCCCccCcccccCCCCCEEECCC
Confidence 9999999999998888899999999 799999999985 67777888999999999999986555445566777777777
Q ss_pred CCc
Q 005226 272 NPL 274 (707)
Q Consensus 272 N~~ 274 (707)
|+.
T Consensus 334 N~l 336 (597)
T 3oja_B 334 NSI 336 (597)
T ss_dssp SCC
T ss_pred CCC
Confidence 753
No 300
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.89 E-value=2.9e-23 Score=213.16 Aligned_cols=187 Identities=22% Similarity=0.204 Sum_probs=167.7
Q ss_pred CcEEEEEcCCCCccccCCCCcCCCCCCCEEEcccCCcCCCCCccccCCCCCceEEecCccCCCCCCcccCCCCCccEEec
Q 005226 69 PRVVGVAISGKNVRGYIPSELGSLIYLRRLNLHNNNLFGSLPDQLFNATSLHSIFLYGNNLSGSLPPSVCNLPRLQNLDL 148 (707)
Q Consensus 69 ~~v~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 148 (707)
++++.|+|++|++++..+..|.++++|++|+|++|+|++..+..|.++++|++|+|++|++++..+..+..+++|++|+|
T Consensus 52 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 131 (276)
T 2z62_A 52 PELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNV 131 (276)
T ss_dssp TTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEEC
T ss_pred cCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEEC
Confidence 68999999999999988889999999999999999999888899999999999999999999877778999999999999
Q ss_pred cCCccccc-CCCCCcccchhhhhhhcCCcccccCCCcccccCCCcc----EEeccCCCCCCCCCcchhhhhccccEEEec
Q 005226 149 SNNSFSGS-LPDGLKNCKQLQRLILARNKFSGQIPAGIWPELENLV----QLDLSDNDFKGPIPNDLGELQSLSATLNLS 223 (707)
Q Consensus 149 s~N~l~~~-~p~~~~~l~~L~~L~l~~N~l~~~lp~~~~~~l~~L~----~L~ls~N~l~~~~p~~~~~l~~L~~~L~l~ 223 (707)
++|++++. +|..|.++++|+.|+|++|+|+ .++...|..+++|+ .|++++|++++..+..+. ..+| ++|+|+
T Consensus 132 ~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~-~~~L-~~L~L~ 208 (276)
T 2z62_A 132 AHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQ-SIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFK-EIRL-KELALD 208 (276)
T ss_dssp CSSCCCCCCCCGGGGGCTTCCEEECCSSCCC-EECGGGGHHHHTCTTCCEEEECCSSCCCEECTTSSC-SCCE-EEEECC
T ss_pred cCCccceecCchhhccCCCCCEEECCCCCCC-cCCHHHhhhhhhccccceeeecCCCcccccCccccC-CCcc-cEEECC
Confidence 99999864 6999999999999999999999 66766667777777 899999999965554444 4578 899999
Q ss_pred cCcCcCCCCCcCCCCCCccEEEccCCcCcccCCCC
Q 005226 224 YNHLSGKIPKSLGNLPVTVSFDLRGNNLSGEIPQT 258 (707)
Q Consensus 224 ~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~ 258 (707)
+|+|++..+..+..+++|+.|++++|++++..|..
T Consensus 209 ~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~l 243 (276)
T 2z62_A 209 TNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRI 243 (276)
T ss_dssp SSCCSCCCTTTTTTCCSCCEEECCSSCBCCCTTTT
T ss_pred CCceeecCHhHhcccccccEEEccCCcccccCCch
Confidence 99999777777899999999999999999887644
No 301
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.88 E-value=3.4e-23 Score=234.92 Aligned_cols=162 Identities=22% Similarity=0.253 Sum_probs=144.0
Q ss_pred cCCCCCceEEecCccCCCCCCcccCCCCCccEEeccCCcccc--cCCCCCcccchhhhhhhcCCcccccCCCcccccCCC
Q 005226 114 FNATSLHSIFLYGNNLSGSLPPSVCNLPRLQNLDLSNNSFSG--SLPDGLKNCKQLQRLILARNKFSGQIPAGIWPELEN 191 (707)
Q Consensus 114 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~l~~N~l~~~lp~~~~~~l~~ 191 (707)
..+++|++|+|++|++++.+|..+.++++|+.|+|++|++++ .+|..+.++++|+.|+|++|++++.+|...|..+++
T Consensus 350 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~ 429 (562)
T 3a79_B 350 PSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAES 429 (562)
T ss_dssp SSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTT
T ss_pred cCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCccc
Confidence 678999999999999999899999999999999999999996 335779999999999999999996699998899999
Q ss_pred ccEEeccCCCCCCCCCcchhhhhccccEEEeccCcCcCCCCCcCCCCCCccEEEccCCcCcccCCC-CCCCCCCCCcccC
Q 005226 192 LVQLDLSDNDFKGPIPNDLGELQSLSATLNLSYNHLSGKIPKSLGNLPVTVSFDLRGNNLSGEIPQ-TGSFANQGPTAFL 270 (707)
Q Consensus 192 L~~L~ls~N~l~~~~p~~~~~l~~L~~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~-~~~~~~~~~~~~~ 270 (707)
|++|+|++|+|++.+|..+. ++| +.|+|++|+|+ .+|..+..+++|+.|++++|+|++.++. ...+.++..+.+.
T Consensus 430 L~~L~l~~n~l~~~~~~~l~--~~L-~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~ 505 (562)
T 3a79_B 430 ILVLNLSSNMLTGSVFRCLP--PKV-KVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLKSVPDGVFDRLTSLQYIWLH 505 (562)
T ss_dssp CCEEECCSSCCCGGGGSSCC--TTC-SEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCCCCCTTSTTTCTTCCCEECC
T ss_pred CCEEECCCCCCCcchhhhhc--CcC-CEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCCCCCHHHHhcCCCCCEEEec
Confidence 99999999999987777664 678 79999999999 7888888999999999999999965554 5667788889999
Q ss_pred CCCcccCCC
Q 005226 271 SNPLLCGFP 279 (707)
Q Consensus 271 ~N~~l~~~~ 279 (707)
+||+.|.++
T Consensus 506 ~N~~~c~c~ 514 (562)
T 3a79_B 506 DNPWDCTCP 514 (562)
T ss_dssp SCCBCCCHH
T ss_pred CCCcCCCcc
Confidence 999998754
No 302
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.88 E-value=9.2e-23 Score=236.82 Aligned_cols=186 Identities=21% Similarity=0.213 Sum_probs=156.4
Q ss_pred CCceeceeEeCC-----CCCCCCCcEEEEEcCCCCccccCCCCcCCCCCCCEEEcccCCcCCCCCccccCCCCCceEEec
Q 005226 51 TPCRWSGISCMN-----ITGFPDPRVVGVAISGKNVRGYIPSELGSLIYLRRLNLHNNNLFGSLPDQLFNATSLHSIFLY 125 (707)
Q Consensus 51 ~~C~w~gv~c~~-----~~~~~~~~v~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 125 (707)
|.|.++.|.|.. .|...+.+++.|+|++|++++..+..|.++++|++|+|++|.+++..|..|.++++|++|+|+
T Consensus 2 C~~~~~~~~cs~~~L~~ip~~~~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~ 81 (680)
T 1ziw_A 2 CTVSHEVADCSHLKLTQVPDDLPTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQ 81 (680)
T ss_dssp --CBSSEEECCSSCCSSCCSCSCTTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECC
T ss_pred ceeECCeeECCCCCccccccccCCCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECC
Confidence 456666788864 344445789999999999999888889999999999999999999999999999999999999
Q ss_pred CccCCCCCCcccCCCCCccEEeccCCcccccCCCCCcccchhhhhhhcCCcccccCCCcccccCCCccEEeccCCCCCCC
Q 005226 126 GNNLSGSLPPSVCNLPRLQNLDLSNNSFSGSLPDGLKNCKQLQRLILARNKFSGQIPAGIWPELENLVQLDLSDNDFKGP 205 (707)
Q Consensus 126 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~lp~~~~~~l~~L~~L~ls~N~l~~~ 205 (707)
+|+|++..+..|.++++|++|+|++|++++..|..|.++++|++|+|++|++++ ++...+..+++|++|+|++|++++.
T Consensus 82 ~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~-~~~~~~~~l~~L~~L~L~~n~l~~~ 160 (680)
T 1ziw_A 82 HNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSS-TKLGTQVQLENLQELLLSNNKIQAL 160 (680)
T ss_dssp SSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSC-CCCCSSSCCTTCCEEECCSSCCCCB
T ss_pred CCccCccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEECCCCcccc-cCchhhcccccCCEEEccCCccccc
Confidence 999996555679999999999999999997777899999999999999999994 4555567899999999999999977
Q ss_pred CCcchh--hhhccccEEEeccCcCcCCCCCcCCCC
Q 005226 206 IPNDLG--ELQSLSATLNLSYNHLSGKIPKSLGNL 238 (707)
Q Consensus 206 ~p~~~~--~l~~L~~~L~l~~N~l~~~~p~~~~~l 238 (707)
.+..+. .+++| +.|++++|++++..|..+..+
T Consensus 161 ~~~~~~~~~~~~L-~~L~L~~n~l~~~~~~~~~~l 194 (680)
T 1ziw_A 161 KSEELDIFANSSL-KKLELSSNQIKEFSPGCFHAI 194 (680)
T ss_dssp CHHHHGGGTTCEE-SEEECTTCCCCCBCTTGGGGS
T ss_pred CHHHhhccccccc-cEEECCCCcccccChhhhhhh
Confidence 776654 34778 788888888887777665443
No 303
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.88 E-value=2e-22 Score=212.60 Aligned_cols=202 Identities=23% Similarity=0.299 Sum_probs=152.0
Q ss_pred CcEEEEEcCCCCccccCCCCcCCCCCCCEEEcccCCcCCCCCccccCCCCCceEEecCccCCCCCCcccCCCCCccEEec
Q 005226 69 PRVVGVAISGKNVRGYIPSELGSLIYLRRLNLHNNNLFGSLPDQLFNATSLHSIFLYGNNLSGSLPPSVCNLPRLQNLDL 148 (707)
Q Consensus 69 ~~v~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 148 (707)
.+++.|+|++|++++..|..|.++++|++|+|++|+|+ .+|..+. ++|++|+|++|++++..+..|.++++|+.|+|
T Consensus 76 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 152 (330)
T 1xku_A 76 KNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVEL 152 (330)
T ss_dssp TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEEC
T ss_pred CCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEEC
Confidence 68999999999999888999999999999999999988 5555443 56666666666666554455555555555555
Q ss_pred cCCcccc--cCCCCCcccc---------------------hhhhhhhcCCcccccCCCcccccCCCccEEeccCCCCCCC
Q 005226 149 SNNSFSG--SLPDGLKNCK---------------------QLQRLILARNKFSGQIPAGIWPELENLVQLDLSDNDFKGP 205 (707)
Q Consensus 149 s~N~l~~--~~p~~~~~l~---------------------~L~~L~l~~N~l~~~lp~~~~~~l~~L~~L~ls~N~l~~~ 205 (707)
++|+++. ..+..+.+++ +|+.|+|++|+++ .++...|..+++|++|+|++|+|++.
T Consensus 153 ~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~l~~~~~~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~Ls~n~l~~~ 231 (330)
T 1xku_A 153 GTNPLKSSGIENGAFQGMKKLSYIRIADTNITTIPQGLPPSLTELHLDGNKIT-KVDAASLKGLNNLAKLGLSFNSISAV 231 (330)
T ss_dssp CSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCSCCSSCCTTCSEEECTTSCCC-EECTGGGTTCTTCCEEECCSSCCCEE
T ss_pred CCCcCCccCcChhhccCCCCcCEEECCCCccccCCccccccCCEEECCCCcCC-ccCHHHhcCCCCCCEEECCCCcCcee
Confidence 5555532 3444444444 5555555566665 34444567899999999999999988
Q ss_pred CCcchhhhhccccEEEeccCcCcCCCCCcCCCCCCccEEEccCCcCcccCCCCC-------CCCCCCCcccCCCCccc
Q 005226 206 IPNDLGELQSLSATLNLSYNHLSGKIPKSLGNLPVTVSFDLRGNNLSGEIPQTG-------SFANQGPTAFLSNPLLC 276 (707)
Q Consensus 206 ~p~~~~~l~~L~~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~-------~~~~~~~~~~~~N~~l~ 276 (707)
.+..+..+++| ++|+|++|+|+ .+|..+..+++|+.|++++|++++..+... ....+..+.+.+||..+
T Consensus 232 ~~~~~~~l~~L-~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~ 307 (330)
T 1xku_A 232 DNGSLANTPHL-RELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQY 307 (330)
T ss_dssp CTTTGGGSTTC-CEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCG
T ss_pred ChhhccCCCCC-CEEECCCCcCc-cCChhhccCCCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCcccc
Confidence 88899999999 89999999999 899999999999999999999997765332 12345566777888654
No 304
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.88 E-value=1e-23 Score=221.17 Aligned_cols=199 Identities=22% Similarity=0.156 Sum_probs=137.4
Q ss_pred cEEEEEcCCCCccccCCCCcCCCCCCCEEEcccCCcCCCCCccccCCCCCceEEecCccCC-------------------
Q 005226 70 RVVGVAISGKNVRGYIPSELGSLIYLRRLNLHNNNLFGSLPDQLFNATSLHSIFLYGNNLS------------------- 130 (707)
Q Consensus 70 ~v~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~------------------- 130 (707)
+++.|+|++|++++..|..|..+++|++|+|++|+|++..+ +..+++|++|+|++|+|+
T Consensus 35 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~l~~l~~~~~L~~L~l~~n~l~ 112 (317)
T 3o53_A 35 NVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLVGPSIETLHAANNNIS 112 (317)
T ss_dssp GCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSSEEEEEEECTTCCEEECCSSCCS
T ss_pred CCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcCCccccccCCCCcCEEECCCCccC
Confidence 55566666666655555555666666666666666554333 555555555555555554
Q ss_pred CCCCcccCCCCCccEEeccCCcccccCCCCCcccchhhhhhhcCCcccccCCCcccccCCCccEEeccCCCCCCCCCcch
Q 005226 131 GSLPPSVCNLPRLQNLDLSNNSFSGSLPDGLKNCKQLQRLILARNKFSGQIPAGIWPELENLVQLDLSDNDFKGPIPNDL 210 (707)
Q Consensus 131 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~lp~~~~~~l~~L~~L~ls~N~l~~~~p~~~ 210 (707)
+..+ ..+++|+.|+|++|++++..|..+..+++|+.|+|++|+|++..+..++..+++|++|+|++|+|++. |. .
T Consensus 113 ~~~~---~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~-~ 187 (317)
T 3o53_A 113 RVSC---SRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KG-Q 187 (317)
T ss_dssp EEEE---CCCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-EC-C
T ss_pred CcCc---cccCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccc-cc-c
Confidence 2222 23567888888888888777778888888888888888888544555555788888888888888744 32 3
Q ss_pred hhhhccccEEEeccCcCcCCCCCcCCCCCCccEEEccCCcCcccCCCCCCCCCCCCcccCCCCcccC
Q 005226 211 GELQSLSATLNLSYNHLSGKIPKSLGNLPVTVSFDLRGNNLSGEIPQTGSFANQGPTAFLSNPLLCG 277 (707)
Q Consensus 211 ~~l~~L~~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~~~~~~~~~~~~N~~l~~ 277 (707)
..+++| ++|+|++|+|++ +|..+..+++|+.|++++|++++.++....+.++..+.+.+|++.|+
T Consensus 188 ~~l~~L-~~L~Ls~N~l~~-l~~~~~~l~~L~~L~L~~N~l~~l~~~~~~l~~L~~L~l~~N~~~~~ 252 (317)
T 3o53_A 188 VVFAKL-KTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLVLIEKALRFSQNLEHFDLRGNGFHCG 252 (317)
T ss_dssp CCCTTC-CEEECCSSCCCE-ECGGGGGGTTCSEEECTTSCCCEECTTCCCCTTCCEEECTTCCCBHH
T ss_pred cccccC-CEEECCCCcCCc-chhhhcccCcccEEECcCCcccchhhHhhcCCCCCEEEccCCCccCc
Confidence 347788 788888888884 55558888888888888888886655555667777888888887765
No 305
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.88 E-value=1.5e-22 Score=232.59 Aligned_cols=216 Identities=22% Similarity=0.191 Sum_probs=171.2
Q ss_pred CCCCCCCCCCCCC---CCceec----eeEeCC-----CCCCCCCcEEEEEcCCCCccccCCCCcCCCCCCCEEEcccCCc
Q 005226 38 DTSVFADWNENDP---TPCRWS----GISCMN-----ITGFPDPRVVGVAISGKNVRGYIPSELGSLIYLRRLNLHNNNL 105 (707)
Q Consensus 38 ~~~~~~~W~~~~~---~~C~w~----gv~c~~-----~~~~~~~~v~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l 105 (707)
+...+++|+...| ++|.+. .|.|.. +|...+..++.|||++|+|+++.+..|.++++|++|+|++|+|
T Consensus 9 ~~~~~~~~~~~~p~~~~~c~~~~~~~~~~c~~~~l~~vP~~lp~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i 88 (635)
T 4g8a_A 9 DDDKLAAANSSIPESWEPCVEVVPNITYQCMELNFYKIPDNLPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEI 88 (635)
T ss_dssp ----------------CCSEEEETTTEEECTTSCCSSCCSSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCC
T ss_pred CcchhhcccCCCCCCCCCccccCCCCEEECCCCCcCccCCCCCcCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcC
Confidence 3445566664433 356543 477863 4545567899999999999999899999999999999999999
Q ss_pred CCCCCccccCCCCCceEEecCccCCCCCCcccCCCCCccEEeccCCcccccCCCCCcccchhhhhhhcCCcccccCCCcc
Q 005226 106 FGSLPDQLFNATSLHSIFLYGNNLSGSLPPSVCNLPRLQNLDLSNNSFSGSLPDGLKNCKQLQRLILARNKFSGQIPAGI 185 (707)
Q Consensus 106 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~lp~~~ 185 (707)
+++.|..|.++++|++|+|++|+|++..+..|.++++|++|+|++|+|++..+..|+++++|++|+|++|+|++.-....
T Consensus 89 ~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~ 168 (635)
T 4g8a_A 89 QTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEY 168 (635)
T ss_dssp CEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGG
T ss_pred CCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCchh
Confidence 98888899999999999999999997777889999999999999999997777789999999999999999984322345
Q ss_pred cccCCCccEEeccCCCCCCCCCcchhhhhcc---ccEEEeccCcCcCCCCCcCCCCCCccEEEccCCcCccc
Q 005226 186 WPELENLVQLDLSDNDFKGPIPNDLGELQSL---SATLNLSYNHLSGKIPKSLGNLPVTVSFDLRGNNLSGE 254 (707)
Q Consensus 186 ~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L---~~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~ 254 (707)
+..+++|++|+|++|+|++..|..|..+.++ ...++++.|.++...+. ......+..+++.+|..+..
T Consensus 169 ~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n~l~~i~~~-~~~~~~~~~l~l~~n~~~~~ 239 (635)
T 4g8a_A 169 FSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPG-AFKEIRLHKLTLRNNFDSLN 239 (635)
T ss_dssp GGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCEECTT-TTTTCEEEEEEEESCCSSHH
T ss_pred hccchhhhhhcccCccccccccccccchhhhhhhhhhhhcccCcccccCcc-cccchhhhhhhhhccccccc
Confidence 6789999999999999998888888887765 13689999999954444 44556778899999876643
No 306
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.88 E-value=5.2e-23 Score=231.11 Aligned_cols=162 Identities=20% Similarity=0.248 Sum_probs=143.3
Q ss_pred cCCCCCceEEecCccCCCCCCcccCCCCCccEEeccCCcccc--cCCCCCcccchhhhhhhcCCcccccCCCcccccCCC
Q 005226 114 FNATSLHSIFLYGNNLSGSLPPSVCNLPRLQNLDLSNNSFSG--SLPDGLKNCKQLQRLILARNKFSGQIPAGIWPELEN 191 (707)
Q Consensus 114 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~l~~N~l~~~lp~~~~~~l~~ 191 (707)
..+++|++|+|++|++++.+|..+..+++|+.|+|++|++++ .+|..+.++++|+.|+|++|++++.+|...|..+++
T Consensus 321 ~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~ 400 (520)
T 2z7x_B 321 SKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKS 400 (520)
T ss_dssp SSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTT
T ss_pred hhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCcc
Confidence 678899999999999998899999999999999999999996 566789999999999999999996699888889999
Q ss_pred ccEEeccCCCCCCCCCcchhhhhccccEEEeccCcCcCCCCCcCCCCCCccEEEccCCcCcccCCC-CCCCCCCCCcccC
Q 005226 192 LVQLDLSDNDFKGPIPNDLGELQSLSATLNLSYNHLSGKIPKSLGNLPVTVSFDLRGNNLSGEIPQ-TGSFANQGPTAFL 270 (707)
Q Consensus 192 L~~L~ls~N~l~~~~p~~~~~l~~L~~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~-~~~~~~~~~~~~~ 270 (707)
|++|+|++|++++.+|..+. ++| +.|+|++|+|+ .+|..+..+++|+.|++++|+|+..++. ...+.++..+.+.
T Consensus 401 L~~L~Ls~N~l~~~~~~~l~--~~L-~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~ 476 (520)
T 2z7x_B 401 LLSLNMSSNILTDTIFRCLP--PRI-KVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLKSVPDGIFDRLTSLQKIWLH 476 (520)
T ss_dssp CCEEECCSSCCCGGGGGSCC--TTC-CEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCEEECcCCCCCcchhhhhc--ccC-CEEECCCCccc-ccchhhhcCCCCCEEECCCCcCCccCHHHhccCCcccEEECc
Confidence 99999999999988777765 678 79999999999 7898888999999999999999965544 4567778889999
Q ss_pred CCCcccCCC
Q 005226 271 SNPLLCGFP 279 (707)
Q Consensus 271 ~N~~l~~~~ 279 (707)
+||+.|.++
T Consensus 477 ~N~~~c~c~ 485 (520)
T 2z7x_B 477 TNPWDCSCP 485 (520)
T ss_dssp SSCBCCCHH
T ss_pred CCCCcccCC
Confidence 999988754
No 307
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.88 E-value=1.5e-23 Score=219.40 Aligned_cols=178 Identities=25% Similarity=0.262 Sum_probs=157.6
Q ss_pred CcEEEEEcCCCCccccCCCCcCCC-----CCCCEEEcccCCcCCCCCccccCCCCCceEEecCccCCCC--CCccc--CC
Q 005226 69 PRVVGVAISGKNVRGYIPSELGSL-----IYLRRLNLHNNNLFGSLPDQLFNATSLHSIFLYGNNLSGS--LPPSV--CN 139 (707)
Q Consensus 69 ~~v~~L~L~~n~l~~~~~~~l~~l-----~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~--~p~~~--~~ 139 (707)
++++.|+|++|++++. |..++.+ ++|++|+|++|+|++..|..|.++++|++|+|++|++.+. +|..+ ..
T Consensus 121 ~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~ 199 (312)
T 1wwl_A 121 PDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPLK 199 (312)
T ss_dssp CCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCTTS
T ss_pred CCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHHhcc
Confidence 6899999999999988 8888887 9999999999999998889999999999999999998865 34455 89
Q ss_pred CCCccEEeccCCcccc--cCC-CCCcccchhhhhhhcCCcccccCCCcccccCCCccEEeccCCCCCCCCCcchhhhhcc
Q 005226 140 LPRLQNLDLSNNSFSG--SLP-DGLKNCKQLQRLILARNKFSGQIPAGIWPELENLVQLDLSDNDFKGPIPNDLGELQSL 216 (707)
Q Consensus 140 l~~L~~L~Ls~N~l~~--~~p-~~~~~l~~L~~L~l~~N~l~~~lp~~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L 216 (707)
+++|++|+|++|+|++ .++ ..+.++++|+.|+|++|+|++.+|...+..+++|++|+|++|+|+ .+|..+. ++|
T Consensus 200 l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~--~~L 276 (312)
T 1wwl_A 200 FPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP--AKL 276 (312)
T ss_dssp CTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCC--SEE
T ss_pred CCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhcc--CCc
Confidence 9999999999999983 222 344678999999999999997776666778999999999999999 7888877 788
Q ss_pred ccEEEeccCcCcCCCCCcCCCCCCccEEEccCCcCcc
Q 005226 217 SATLNLSYNHLSGKIPKSLGNLPVTVSFDLRGNNLSG 253 (707)
Q Consensus 217 ~~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~ 253 (707)
++|+|++|+|++. |. +..+++|+.|++++|++++
T Consensus 277 -~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 277 -SVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp -EEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTC
T ss_pred -eEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCC
Confidence 8999999999965 76 9999999999999999985
No 308
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.88 E-value=3.1e-23 Score=242.90 Aligned_cols=198 Identities=23% Similarity=0.289 Sum_probs=176.9
Q ss_pred CcEEEEEcCCCCccc-----------------cCCCCcC--CCCCCCEEEcccCCcCCCCCccccCCCCCceEEecCcc-
Q 005226 69 PRVVGVAISGKNVRG-----------------YIPSELG--SLIYLRRLNLHNNNLFGSLPDQLFNATSLHSIFLYGNN- 128 (707)
Q Consensus 69 ~~v~~L~L~~n~l~~-----------------~~~~~l~--~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~- 128 (707)
.+++.|+|++|++++ .+|..++ ++++|++|+|++|++.+.+|..|.++++|++|+|++|+
T Consensus 448 ~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~ 527 (876)
T 4ecn_A 448 TKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRG 527 (876)
T ss_dssp TTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTT
T ss_pred CCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCC
Confidence 689999999999999 4899988 99999999999999999999999999999999999998
Q ss_pred CCC-CCCcccCCCC-------CccEEeccCCcccccCCC--CCcccchhhhhhhcCCcccccCCCcccccCCCccEEecc
Q 005226 129 LSG-SLPPSVCNLP-------RLQNLDLSNNSFSGSLPD--GLKNCKQLQRLILARNKFSGQIPAGIWPELENLVQLDLS 198 (707)
Q Consensus 129 l~~-~~p~~~~~l~-------~L~~L~Ls~N~l~~~~p~--~~~~l~~L~~L~l~~N~l~~~lp~~~~~~l~~L~~L~ls 198 (707)
|++ .+|..+++++ +|+.|+|++|+|+ .+|. .|.++++|+.|+|++|+|+ .|| .|..+++|+.|+|+
T Consensus 528 lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp--~~~~L~~L~~L~Ls 603 (876)
T 4ecn_A 528 ISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLE--AFGTNVKLTDLKLD 603 (876)
T ss_dssp SCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCC--CCCTTSEESEEECC
T ss_pred cccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cch--hhcCCCcceEEECc
Confidence 998 7888666554 9999999999999 8999 9999999999999999999 999 56899999999999
Q ss_pred CCCCCCCCCcchhhhhc-cccEEEeccCcCcCCCCCcCCCCCC--ccEEEccCCcCcccCCCCC------CCCCCCCccc
Q 005226 199 DNDFKGPIPNDLGELQS-LSATLNLSYNHLSGKIPKSLGNLPV--TVSFDLRGNNLSGEIPQTG------SFANQGPTAF 269 (707)
Q Consensus 199 ~N~l~~~~p~~~~~l~~-L~~~L~l~~N~l~~~~p~~~~~l~~--L~~l~l~~N~l~~~~p~~~------~~~~~~~~~~ 269 (707)
+|+|+ .+|..+.++++ | +.|+|++|+|+ .+|..+..++. |+.|++++|++++.+|... ...++..+.+
T Consensus 604 ~N~l~-~lp~~l~~l~~~L-~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~L 680 (876)
T 4ecn_A 604 YNQIE-EIPEDFCAFTDQV-EGLGFSHNKLK-YIPNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTL 680 (876)
T ss_dssp SSCCS-CCCTTSCEECTTC-CEEECCSSCCC-SCCSCCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEEC
T ss_pred CCccc-cchHHHhhccccC-CEEECcCCCCC-cCchhhhccccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEc
Confidence 99999 89999999999 9 89999999999 89998888765 9999999999999887543 1224455555
Q ss_pred CCCC
Q 005226 270 LSNP 273 (707)
Q Consensus 270 ~~N~ 273 (707)
.+|.
T Consensus 681 s~N~ 684 (876)
T 4ecn_A 681 SYNE 684 (876)
T ss_dssp CSSC
T ss_pred cCCc
Confidence 5554
No 309
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.87 E-value=3.7e-22 Score=229.27 Aligned_cols=199 Identities=20% Similarity=0.291 Sum_probs=114.7
Q ss_pred CcEEEEEcCCCCccccCCCCcCCCCC-CCEEEcccCCcCCCCCccccCCC--CCceEEecCccCCCCCCcccC-------
Q 005226 69 PRVVGVAISGKNVRGYIPSELGSLIY-LRRLNLHNNNLFGSLPDQLFNAT--SLHSIFLYGNNLSGSLPPSVC------- 138 (707)
Q Consensus 69 ~~v~~L~L~~n~l~~~~~~~l~~l~~-L~~L~L~~N~l~~~~p~~~~~l~--~L~~L~L~~N~l~~~~p~~~~------- 138 (707)
.+++.|+|++|+++ .+|..+..+++ |++|+|++|+|+ .+|..+..++ +|++|+|++|++++.+|..|.
T Consensus 353 ~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~ 430 (636)
T 4eco_A 353 IKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPF 430 (636)
T ss_dssp EEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCC
T ss_pred CCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcCCcCCCcchhhhcccccccc
Confidence 35666666666666 55666666666 666666666666 5666555543 666666666666666666665
Q ss_pred CCCCccEEeccCCcccccCCCC-CcccchhhhhhhcCCcccccCCCcccccCC-------CccEEeccCCCCCCCCCcch
Q 005226 139 NLPRLQNLDLSNNSFSGSLPDG-LKNCKQLQRLILARNKFSGQIPAGIWPELE-------NLVQLDLSDNDFKGPIPNDL 210 (707)
Q Consensus 139 ~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~L~~L~l~~N~l~~~lp~~~~~~l~-------~L~~L~ls~N~l~~~~p~~~ 210 (707)
.+++|+.|+|++|+|+ .+|.. +..+++|+.|+|++|+|+ .+|...+..+. +|++|+|++|+|+ .+|..+
T Consensus 431 ~~~~L~~L~Ls~N~l~-~lp~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~ 507 (636)
T 4eco_A 431 KGINVSSINLSNNQIS-KFPKELFSTGSPLSSINLMGNMLT-EIPKNSLKDENENFKNTYLLTSIDLRFNKLT-KLSDDF 507 (636)
T ss_dssp CCCCEEEEECCSSCCC-SCCTHHHHTTCCCSEEECCSSCCS-BCCSSSSEETTEECTTGGGCCEEECCSSCCC-BCCGGG
T ss_pred cCCCCCEEECcCCccC-cCCHHHHccCCCCCEEECCCCCCC-CcCHHHhccccccccccCCccEEECcCCcCC-ccChhh
Confidence 5556666666666666 34433 334566666666666665 55555544332 5566666666665 455555
Q ss_pred h--hhhccccEEEeccCcCcCCCCCcCCCCCCccEEEc------cCCcCcccCCC-CCCCCCCCCcccCCCCc
Q 005226 211 G--ELQSLSATLNLSYNHLSGKIPKSLGNLPVTVSFDL------RGNNLSGEIPQ-TGSFANQGPTAFLSNPL 274 (707)
Q Consensus 211 ~--~l~~L~~~L~l~~N~l~~~~p~~~~~l~~L~~l~l------~~N~l~~~~p~-~~~~~~~~~~~~~~N~~ 274 (707)
. .+++| +.|+|++|+|++ +|..+..+++|+.|++ ++|++.+.+|. ...+.++..+.+.+|..
T Consensus 508 ~~~~l~~L-~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l 578 (636)
T 4eco_A 508 RATTLPYL-VGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCPSLTQLQIGSNDI 578 (636)
T ss_dssp STTTCTTC-CEEECCSSCCSS-CCCGGGGCSSCCEEECCSCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC
T ss_pred hhccCCCc-CEEECCCCCCCC-cChhhhcCCCCCEEECCCCcccccCcccccChHHHhcCCCCCEEECCCCcC
Confidence 4 55555 456666666654 5555555566666655 34455555552 22334444455555543
No 310
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.87 E-value=4.1e-22 Score=211.96 Aligned_cols=221 Identities=20% Similarity=0.138 Sum_probs=180.9
Q ss_pred CCceeceeEeCC-----CCCCCCCcEEEEEcCCCCccccCCCCcCCCCCCCEEEcccCCcCCCCC-ccccCCCCCce-EE
Q 005226 51 TPCRWSGISCMN-----ITGFPDPRVVGVAISGKNVRGYIPSELGSLIYLRRLNLHNNNLFGSLP-DQLFNATSLHS-IF 123 (707)
Q Consensus 51 ~~C~w~gv~c~~-----~~~~~~~~v~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~-L~ 123 (707)
|-|+|..|.|++ +|...+.+++.|+|++|+|+.+.+..|.++++|++|+|++|++.+.+| ..|.++++|++ ++
T Consensus 7 C~C~~~~v~C~~~~Lt~iP~~l~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~ 86 (350)
T 4ay9_X 7 CHCSNRVFLCQESKVTEIPSDLPRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRI 86 (350)
T ss_dssp SEEETTEEEEESTTCCSCCTTCCTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEE
T ss_pred cEeeCCEEEecCCCCCccCcCcCCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhc
Confidence 558899999974 333344689999999999998777889999999999999999977665 46789998775 67
Q ss_pred ecCccCCCCCCcccCCCCCccEEeccCCcccccCCCCCcccchhhhhhhcC-CcccccCCCcccccCC-CccEEeccCCC
Q 005226 124 LYGNNLSGSLPPSVCNLPRLQNLDLSNNSFSGSLPDGLKNCKQLQRLILAR-NKFSGQIPAGIWPELE-NLVQLDLSDND 201 (707)
Q Consensus 124 L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~-N~l~~~lp~~~~~~l~-~L~~L~ls~N~ 201 (707)
+++|+|+...|..|..+++|+.|++++|+|++..+..+....++..|++++ |++. .+|...|..+. .|+.|+|++|+
T Consensus 87 ~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~-~l~~~~f~~~~~~l~~L~L~~N~ 165 (350)
T 4ay9_X 87 EKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIH-TIERNSFVGLSFESVILWLNKNG 165 (350)
T ss_dssp EEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCC-EECTTSSTTSBSSCEEEECCSSC
T ss_pred ccCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccc-cccccchhhcchhhhhhcccccc
Confidence 788999988889999999999999999999977777788888899999966 6777 88888777765 68999999999
Q ss_pred CCCCCCcchhhhhccccEEEecc-CcCcCCCCCcCCCCCCccEEEccCCcCcccCCCCCCCCCCCCcccCCCCccc
Q 005226 202 FKGPIPNDLGELQSLSATLNLSY-NHLSGKIPKSLGNLPVTVSFDLRGNNLSGEIPQTGSFANQGPTAFLSNPLLC 276 (707)
Q Consensus 202 l~~~~p~~~~~l~~L~~~L~l~~-N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~~~~~~~~~~~~N~~l~ 276 (707)
|+ .+|.......+| ++|++++ |.++...++.|..+++|+.|++++|+|+..++ ..+.++..+...+++.+.
T Consensus 166 i~-~i~~~~f~~~~L-~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~--~~~~~L~~L~~l~~~~l~ 237 (350)
T 4ay9_X 166 IQ-EIHNSAFNGTQL-DELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPS--YGLENLKKLRARSTYNLK 237 (350)
T ss_dssp CC-EECTTSSTTEEE-EEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCS--SSCTTCCEEECTTCTTCC
T ss_pred cc-CCChhhccccch-hHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccCh--hhhccchHhhhccCCCcC
Confidence 99 566665566788 6999975 67774444678999999999999999996655 456777777766665443
No 311
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.87 E-value=4.6e-22 Score=236.10 Aligned_cols=190 Identities=21% Similarity=0.195 Sum_probs=174.5
Q ss_pred CCCcEEEEEcCCCCccccCCCCcCCCCCCCEEEcccCCcCCCC-CccccCCCCCceEEecCccCCCCCCcccCCCCCccE
Q 005226 67 PDPRVVGVAISGKNVRGYIPSELGSLIYLRRLNLHNNNLFGSL-PDQLFNATSLHSIFLYGNNLSGSLPPSVCNLPRLQN 145 (707)
Q Consensus 67 ~~~~v~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 145 (707)
.+++++.|+|++|.|++..|..|.++++|++|+|++|.+.+.+ |..|.++++|++|+|++|+|++..|..|+++++|++
T Consensus 22 lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 101 (844)
T 3j0a_A 22 VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFE 101 (844)
T ss_dssp SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCC
T ss_pred CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCE
Confidence 4589999999999999999999999999999999999766665 888999999999999999999889999999999999
Q ss_pred EeccCCcccccCCCC--CcccchhhhhhhcCCcccccCCCcccccCCCccEEeccCCCCCCCCCcchhhh--hccccEEE
Q 005226 146 LDLSNNSFSGSLPDG--LKNCKQLQRLILARNKFSGQIPAGIWPELENLVQLDLSDNDFKGPIPNDLGEL--QSLSATLN 221 (707)
Q Consensus 146 L~Ls~N~l~~~~p~~--~~~l~~L~~L~l~~N~l~~~lp~~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l--~~L~~~L~ 221 (707)
|+|++|.+++.+|.. |.++++|++|+|++|++++..+...|..+++|++|+|++|.+++..|..+..+ ++| +.|+
T Consensus 102 L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~~~L-~~L~ 180 (844)
T 3j0a_A 102 LRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTL-SFFS 180 (844)
T ss_dssp EECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHHHCSS-CCCE
T ss_pred eeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccccCCcc-ceEE
Confidence 999999999877765 99999999999999999965566678999999999999999999999999988 889 7999
Q ss_pred eccCcCcCCCCCcCCCCCC------ccEEEccCCcCcccCCC
Q 005226 222 LSYNHLSGKIPKSLGNLPV------TVSFDLRGNNLSGEIPQ 257 (707)
Q Consensus 222 l~~N~l~~~~p~~~~~l~~------L~~l~l~~N~l~~~~p~ 257 (707)
|++|.+++..|..+..+++ |+.|++++|.+++.+|.
T Consensus 181 L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~ 222 (844)
T 3j0a_A 181 LAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITG 222 (844)
T ss_dssp ECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTS
T ss_pred CCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHH
Confidence 9999999999988887776 99999999999887763
No 312
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.87 E-value=5.6e-22 Score=218.58 Aligned_cols=182 Identities=21% Similarity=0.237 Sum_probs=158.1
Q ss_pred CcEEEEEcCCCCccccCCCCcCCCCCCCEEEcccCCcCCCCCccccCCCCCceEEecCccCCCCCCc-------------
Q 005226 69 PRVVGVAISGKNVRGYIPSELGSLIYLRRLNLHNNNLFGSLPDQLFNATSLHSIFLYGNNLSGSLPP------------- 135 (707)
Q Consensus 69 ~~v~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~------------- 135 (707)
.+++.|+|++|+|++..+..|.++++|++|+|++|+|++..+..|.++++|++|+|++|+|+...+.
T Consensus 99 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l 178 (452)
T 3zyi_A 99 HHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDL 178 (452)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEEC
T ss_pred CCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeC
Confidence 6788999999999988888899999999999999999877777788888999999988888744332
Q ss_pred ------------ccCCCCCccEEeccCCcccccCCCCCcccchhhhhhhcCCcccccCCCcccccCCCccEEeccCCCCC
Q 005226 136 ------------SVCNLPRLQNLDLSNNSFSGSLPDGLKNCKQLQRLILARNKFSGQIPAGIWPELENLVQLDLSDNDFK 203 (707)
Q Consensus 136 ------------~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~lp~~~~~~l~~L~~L~ls~N~l~ 203 (707)
.|.++++|+.|+|++|+|++ +| .+..+++|+.|+|++|+|+ .++...|..+++|+.|+|++|+|+
T Consensus 179 ~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~L~L~~n~l~ 255 (452)
T 3zyi_A 179 GELKKLEYISEGAFEGLFNLKYLNLGMCNIKD-MP-NLTPLVGLEELEMSGNHFP-EIRPGSFHGLSSLKKLWVMNSQVS 255 (452)
T ss_dssp CCCTTCCEECTTTTTTCTTCCEEECTTSCCSS-CC-CCTTCTTCCEEECTTSCCS-EECGGGGTTCTTCCEEECTTSCCC
T ss_pred CCCCCccccChhhccCCCCCCEEECCCCcccc-cc-cccccccccEEECcCCcCc-ccCcccccCccCCCEEEeCCCcCc
Confidence 35667778888888888874 44 5889999999999999999 666667789999999999999999
Q ss_pred CCCCcchhhhhccccEEEeccCcCcCCCCCcCCCCCCccEEEccCCcCccc
Q 005226 204 GPIPNDLGELQSLSATLNLSYNHLSGKIPKSLGNLPVTVSFDLRGNNLSGE 254 (707)
Q Consensus 204 ~~~p~~~~~l~~L~~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~ 254 (707)
+..|..|.++++| +.|+|++|+|++..+..+..+++|+.|+|++|++...
T Consensus 256 ~~~~~~~~~l~~L-~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~Cd 305 (452)
T 3zyi_A 256 LIERNAFDGLASL-VELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNCD 305 (452)
T ss_dssp EECTTTTTTCTTC-CEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEECS
T ss_pred eECHHHhcCCCCC-CEEECCCCcCCccChHHhccccCCCEEEccCCCcCCC
Confidence 9889999999999 7999999999988888899999999999999998754
No 313
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.87 E-value=1.6e-22 Score=226.55 Aligned_cols=199 Identities=25% Similarity=0.365 Sum_probs=163.8
Q ss_pred CCCCCCCCCCCCc-----eecee-EeCCCCCCCCCcEEEEEcCCCCccccCCCCcCCCCCCCEEEcccCCcCCCCCcccc
Q 005226 41 VFADWNENDPTPC-----RWSGI-SCMNITGFPDPRVVGVAISGKNVRGYIPSELGSLIYLRRLNLHNNNLFGSLPDQLF 114 (707)
Q Consensus 41 ~~~~W~~~~~~~C-----~w~gv-~c~~~~~~~~~~v~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~ 114 (707)
.+.+|... ..+| .|.|+ .|.. .+++.|+|++|+|++ +|..+. ++|++|+|++|+|+ .+| .
T Consensus 32 ~l~~W~~~-~~~~~~~~~~~~~l~~C~~------~~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~ 97 (571)
T 3cvr_A 32 AWDKWEKQ-ALPGENRNEAVSLLKECLI------NQFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---E 97 (571)
T ss_dssp HHHHHHTT-CCTTCCHHHHHHHHHHHHH------TTCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---C
T ss_pred HHHHHhcc-CCccccccchhhhcccccc------CCccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---c
Confidence 34567643 3567 79999 7865 589999999999997 677663 89999999999999 677 4
Q ss_pred CCCCCceEEecCccCCCCCCcccCCCCCccEEeccCCcccccCCCCCcccchhhhhhhcCCcccccCCCcccccCCCccE
Q 005226 115 NATSLHSIFLYGNNLSGSLPPSVCNLPRLQNLDLSNNSFSGSLPDGLKNCKQLQRLILARNKFSGQIPAGIWPELENLVQ 194 (707)
Q Consensus 115 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~lp~~~~~~l~~L~~ 194 (707)
.+++|++|+|++|+|++ +|. +.+ +|+.|+|++|+|++ +|. .+++|+.|+|++|+|+ .+|. .+++|++
T Consensus 98 ~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~-~lp~----~l~~L~~ 164 (571)
T 3cvr_A 98 LPASLEYLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLT-MLPE----LPTSLEV 164 (571)
T ss_dssp CCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCS-CCCC----CCTTCCE
T ss_pred ccCCCCEEEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccC-cCCC----cCCCcCE
Confidence 57999999999999996 777 765 99999999999996 776 6899999999999999 5886 5789999
Q ss_pred EeccCCCCCCCCCcchhhhhccccEEEeccCcCcCCCCCcCCCCCCc-------cEEEccCCcCcccCCCCCCCCCCCCc
Q 005226 195 LDLSDNDFKGPIPNDLGELQSLSATLNLSYNHLSGKIPKSLGNLPVT-------VSFDLRGNNLSGEIPQTGSFANQGPT 267 (707)
Q Consensus 195 L~ls~N~l~~~~p~~~~~l~~L~~~L~l~~N~l~~~~p~~~~~l~~L-------~~l~l~~N~l~~~~p~~~~~~~~~~~ 267 (707)
|+|++|+|++ +|. |. ++| +.|+|++|+|+ .+|. +.. +| +.|+|++|+|+..++....+.++..+
T Consensus 165 L~Ls~N~L~~-lp~-l~--~~L-~~L~Ls~N~L~-~lp~-~~~--~L~~~~~~L~~L~Ls~N~l~~lp~~l~~l~~L~~L 235 (571)
T 3cvr_A 165 LSVRNNQLTF-LPE-LP--ESL-EALDVSTNLLE-SLPA-VPV--RNHHSEETEIFFRCRENRITHIPENILSLDPTCTI 235 (571)
T ss_dssp EECCSSCCSC-CCC-CC--TTC-CEEECCSSCCS-SCCC-CC----------CCEEEECCSSCCCCCCGGGGGSCTTEEE
T ss_pred EECCCCCCCC-cch-hh--CCC-CEEECcCCCCC-chhh-HHH--hhhcccccceEEecCCCcceecCHHHhcCCCCCEE
Confidence 9999999996 777 66 788 79999999999 7777 654 77 99999999999655445567777788
Q ss_pred ccCCCCcc
Q 005226 268 AFLSNPLL 275 (707)
Q Consensus 268 ~~~~N~~l 275 (707)
.+.+|+.-
T Consensus 236 ~L~~N~l~ 243 (571)
T 3cvr_A 236 ILEDNPLS 243 (571)
T ss_dssp ECCSSSCC
T ss_pred EeeCCcCC
Confidence 88888753
No 314
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.87 E-value=4e-22 Score=218.92 Aligned_cols=182 Identities=21% Similarity=0.243 Sum_probs=149.9
Q ss_pred CcEEEEEcCCCCccccCCCCcCCCCCCCEEEcccCCcCCCCCccccCCCCCceEEecCccCCCCCC--------------
Q 005226 69 PRVVGVAISGKNVRGYIPSELGSLIYLRRLNLHNNNLFGSLPDQLFNATSLHSIFLYGNNLSGSLP-------------- 134 (707)
Q Consensus 69 ~~v~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-------------- 134 (707)
.+++.|+|++|+|++..+..|.++++|++|+|++|+|++..+..|.++++|++|+|++|+|+...+
T Consensus 88 ~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l 167 (440)
T 3zyj_A 88 RHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDL 167 (440)
T ss_dssp SSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEEC
T ss_pred CCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCC
Confidence 567777788777777777777777777777777777776666667777777777777777663333
Q ss_pred -----------cccCCCCCccEEeccCCcccccCCCCCcccchhhhhhhcCCcccccCCCcccccCCCccEEeccCCCCC
Q 005226 135 -----------PSVCNLPRLQNLDLSNNSFSGSLPDGLKNCKQLQRLILARNKFSGQIPAGIWPELENLVQLDLSDNDFK 203 (707)
Q Consensus 135 -----------~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~lp~~~~~~l~~L~~L~ls~N~l~ 203 (707)
..|.++++|+.|+|++|+|+ .+| .+..+++|+.|+|++|+|+ .++...|..+++|+.|+|++|+|+
T Consensus 168 ~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~~-~~~~l~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~L~L~~n~l~ 244 (440)
T 3zyj_A 168 GELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EIP-NLTPLIKLDELDLSGNHLS-AIRPGSFQGLMHLQKLWMIQSQIQ 244 (440)
T ss_dssp CCCTTCCEECTTTTTTCSSCCEEECTTSCCS-SCC-CCTTCSSCCEEECTTSCCC-EECTTTTTTCTTCCEEECTTCCCC
T ss_pred CCCCCcceeCcchhhcccccCeecCCCCcCc-ccc-ccCCCcccCEEECCCCccC-ccChhhhccCccCCEEECCCCcee
Confidence 24666777788888888887 555 4788999999999999999 666667789999999999999999
Q ss_pred CCCCcchhhhhccccEEEeccCcCcCCCCCcCCCCCCccEEEccCCcCccc
Q 005226 204 GPIPNDLGELQSLSATLNLSYNHLSGKIPKSLGNLPVTVSFDLRGNNLSGE 254 (707)
Q Consensus 204 ~~~p~~~~~l~~L~~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~ 254 (707)
+..+..|.++++| +.|+|++|+|++..+..+..+++|+.|+|++|++...
T Consensus 245 ~~~~~~~~~l~~L-~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~Cd 294 (440)
T 3zyj_A 245 VIERNAFDNLQSL-VEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWNCN 294 (440)
T ss_dssp EECTTSSTTCTTC-CEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEECS
T ss_pred EEChhhhcCCCCC-CEEECCCCCCCccChhHhccccCCCEEEcCCCCccCC
Confidence 9889999999999 8999999999988888899999999999999999753
No 315
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.87 E-value=5.9e-22 Score=194.34 Aligned_cols=177 Identities=21% Similarity=0.240 Sum_probs=155.0
Q ss_pred ceeceeEeCCCCCCCCCcEEEEEcCCCCccccCCCCcCCCCCCCEEEcccCCcCCCCCccccCCCCCceEEecCccCCCC
Q 005226 53 CRWSGISCMNITGFPDPRVVGVAISGKNVRGYIPSELGSLIYLRRLNLHNNNLFGSLPDQLFNATSLHSIFLYGNNLSGS 132 (707)
Q Consensus 53 C~w~gv~c~~~~~~~~~~v~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 132 (707)
|+..|++... .....+++.|+|++|++++..+..|..+++|++|+|++|+|++..+..|.++++|++|+|++|+|++.
T Consensus 14 c~~~~l~~~p--~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~ 91 (208)
T 2o6s_A 14 CYSQGRTSVP--TGIPAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSL 91 (208)
T ss_dssp CCSSCCSSCC--SCCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCC
T ss_pred ecCCCccCCC--CCCCCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCcc
Confidence 6777765443 33346899999999999988888899999999999999999977777789999999999999999977
Q ss_pred CCcccCCCCCccEEeccCCcccccCCCCCcccchhhhhhhcCCcccccCCCcccccCCCccEEeccCCCCCCCCCcchhh
Q 005226 133 LPPSVCNLPRLQNLDLSNNSFSGSLPDGLKNCKQLQRLILARNKFSGQIPAGIWPELENLVQLDLSDNDFKGPIPNDLGE 212 (707)
Q Consensus 133 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~lp~~~~~~l~~L~~L~ls~N~l~~~~p~~~~~ 212 (707)
.+..|..+++|++|+|++|+|++..+..|.++++|+.|+|++|+|+ .+|...|..+++|++|+|++|.+.+..
T Consensus 92 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~~~~~~~~l~~L~~L~l~~N~~~~~~------ 164 (208)
T 2o6s_A 92 PNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLK-SVPDGVFDRLTSLQYIWLHDNPWDCTC------ 164 (208)
T ss_dssp CTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCS-CCCTTTTTTCTTCCEEECCSCCBCCCT------
T ss_pred CHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccc-eeCHHHhccCCCccEEEecCCCeecCC------
Confidence 7777899999999999999999777777999999999999999999 788888889999999999999988644
Q ss_pred hhccccEEEeccCcCcCCCCCcCCCCCC
Q 005226 213 LQSLSATLNLSYNHLSGKIPKSLGNLPV 240 (707)
Q Consensus 213 l~~L~~~L~l~~N~l~~~~p~~~~~l~~ 240 (707)
+.| +.|+++.|+++|.+|..++.++.
T Consensus 165 -~~l-~~L~~~~n~~~g~ip~~~~~l~~ 190 (208)
T 2o6s_A 165 -PGI-RYLSEWINKHSGVVRNSAGSVAP 190 (208)
T ss_dssp -TTT-HHHHHHHHHCTTTBBCTTSSBCT
T ss_pred -CCH-HHHHHHHHhCCceeeccCccccC
Confidence 456 68899999999999998887654
No 316
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.87 E-value=1.1e-21 Score=195.53 Aligned_cols=156 Identities=23% Similarity=0.321 Sum_probs=82.8
Q ss_pred CCceeceeEeCCCCCCCCCcEEEEEcCCCCccccCCCCcCCCCCCCEEEcccCCcCCCCCccccCCCCCceEEecCccCC
Q 005226 51 TPCRWSGISCMNITGFPDPRVVGVAISGKNVRGYIPSELGSLIYLRRLNLHNNNLFGSLPDQLFNATSLHSIFLYGNNLS 130 (707)
Q Consensus 51 ~~C~w~gv~c~~~~~~~~~~v~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 130 (707)
+.|+|++|.|... +++ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|+
T Consensus 17 ~~Cs~~~v~c~~~----------------~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~ 77 (229)
T 3e6j_A 17 CSCSGTTVDCRSK----------------RHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLG 77 (229)
T ss_dssp CEEETTEEECTTS----------------CCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC
T ss_pred CEEeCCEeEccCC----------------CcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCC
Confidence 6799999999752 121 2232222 45555555555555544555555555555555555554
Q ss_pred CCCCcccCCCCCccEEeccCCcccccCCCCCcccchhhhhhhcCCcccccCCCcccccCCCccEEeccCCCCCCCCCcch
Q 005226 131 GSLPPSVCNLPRLQNLDLSNNSFSGSLPDGLKNCKQLQRLILARNKFSGQIPAGIWPELENLVQLDLSDNDFKGPIPNDL 210 (707)
Q Consensus 131 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~lp~~~~~~l~~L~~L~ls~N~l~~~~p~~~ 210 (707)
...+..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|+|+ .+|..+ ..+++|++|+|++|+|++..+..|
T Consensus 78 ~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~-~~l~~L~~L~L~~N~l~~~~~~~~ 155 (229)
T 3e6j_A 78 ALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGI-ERLTHLTHLALDQNQLKSIPHGAF 155 (229)
T ss_dssp CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTG-GGCTTCSEEECCSSCCCCCCTTTT
T ss_pred CcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCccc-ccCCCCCEEECCCCcCCccCHHHH
Confidence 333344455555555555555555444444455555555555555555 555443 455555555555555554444445
Q ss_pred hhhhccccEEEeccCcCc
Q 005226 211 GELQSLSATLNLSYNHLS 228 (707)
Q Consensus 211 ~~l~~L~~~L~l~~N~l~ 228 (707)
..+++| +.|+|++|.+.
T Consensus 156 ~~l~~L-~~L~l~~N~~~ 172 (229)
T 3e6j_A 156 DRLSSL-THAYLFGNPWD 172 (229)
T ss_dssp TTCTTC-CEEECTTSCBC
T ss_pred hCCCCC-CEEEeeCCCcc
Confidence 555555 45555555555
No 317
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.86 E-value=8.8e-23 Score=217.45 Aligned_cols=187 Identities=19% Similarity=0.223 Sum_probs=142.6
Q ss_pred CcEEEEEcCCCCccccCCCCcCCCCCCCEEEcccCCcCCCCCccccCCCCCceEEecCccCCCCCC-cccCCCCCccEEe
Q 005226 69 PRVVGVAISGKNVRGYIPSELGSLIYLRRLNLHNNNLFGSLPDQLFNATSLHSIFLYGNNLSGSLP-PSVCNLPRLQNLD 147 (707)
Q Consensus 69 ~~v~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~ 147 (707)
++++.|+|++|++++..|..|.++++|++|+|++|+|++..+..|.++++|++|+|++|++++..+ ..|..+++|+.|+
T Consensus 76 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~ 155 (353)
T 2z80_A 76 VNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILR 155 (353)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEE
T ss_pred CCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEE
Confidence 678888888888888888888888888888888888886555558888888888888888884333 3677788888888
Q ss_pred ccCC-cccccCCCCCcccchhhhhhhcCCcccccCCCc-----------------------ccccCCCccEEeccCCCCC
Q 005226 148 LSNN-SFSGSLPDGLKNCKQLQRLILARNKFSGQIPAG-----------------------IWPELENLVQLDLSDNDFK 203 (707)
Q Consensus 148 Ls~N-~l~~~~p~~~~~l~~L~~L~l~~N~l~~~lp~~-----------------------~~~~l~~L~~L~ls~N~l~ 203 (707)
+++| .+.+..|..|.++++|+.|++++|++++..|.. .+..+++|+.|+|++|+++
T Consensus 156 l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~ 235 (353)
T 2z80_A 156 VGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLD 235 (353)
T ss_dssp EEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCT
T ss_pred CCCCccccccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCccc
Confidence 8877 466555667777777777777777776443432 2334567777777777777
Q ss_pred CC-------------------------------CCcchhhhhccccEEEeccCcCcCCCCCc-CCCCCCccEEEccCCcC
Q 005226 204 GP-------------------------------IPNDLGELQSLSATLNLSYNHLSGKIPKS-LGNLPVTVSFDLRGNNL 251 (707)
Q Consensus 204 ~~-------------------------------~p~~~~~l~~L~~~L~l~~N~l~~~~p~~-~~~l~~L~~l~l~~N~l 251 (707)
+. +|..+.++++| ++|+|++|+|+ .+|.. +..+++|+.|++++|++
T Consensus 236 ~~~~~~l~~~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L-~~L~Ls~N~l~-~i~~~~~~~l~~L~~L~L~~N~~ 313 (353)
T 2z80_A 236 TFHFSELSTGETNSLIKKFTFRNVKITDESLFQVMKLLNQISGL-LELEFSRNQLK-SVPDGIFDRLTSLQKIWLHTNPW 313 (353)
T ss_dssp TCCCC------CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTC-CEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCB
T ss_pred cccccccccccccchhhccccccccccCcchhhhHHHHhcccCC-CEEECCCCCCC-ccCHHHHhcCCCCCEEEeeCCCc
Confidence 53 24456778899 79999999999 56665 58999999999999999
Q ss_pred cccCCC
Q 005226 252 SGEIPQ 257 (707)
Q Consensus 252 ~~~~p~ 257 (707)
++..|.
T Consensus 314 ~~~~~~ 319 (353)
T 2z80_A 314 DCSCPR 319 (353)
T ss_dssp CCCHHH
T ss_pred cCcCCC
Confidence 987763
No 318
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.86 E-value=1.3e-21 Score=221.90 Aligned_cols=143 Identities=21% Similarity=0.203 Sum_probs=123.1
Q ss_pred CCCCCCcEEEEEcCCCCccccCCCCcCCCCCCCEEEcccCCcCCCCCccccCCCCCceEEecCccCCCCCCcccCCCCCc
Q 005226 64 TGFPDPRVVGVAISGKNVRGYIPSELGSLIYLRRLNLHNNNLFGSLPDQLFNATSLHSIFLYGNNLSGSLPPSVCNLPRL 143 (707)
Q Consensus 64 ~~~~~~~v~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 143 (707)
|...+++++.|+|++|++++..|..|.++++|++|+|++|+|++..|..|.++++|++|||++|+|+ .+|.. .+++|
T Consensus 47 p~~~~~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L 123 (562)
T 3a79_B 47 PKDLPPRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQ-NISCC--PMASL 123 (562)
T ss_dssp CTTSCTTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCC-EECSC--CCTTC
T ss_pred CCCCCCCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCC-ccCcc--ccccC
Confidence 3333478999999999999988899999999999999999999888999999999999999999999 77776 89999
Q ss_pred cEEeccCCcccc-cCCCCCcccchhhhhhhcCCcccccCCCcccccCCCc--cEEeccCCCC--CCCCCcchhhh
Q 005226 144 QNLDLSNNSFSG-SLPDGLKNCKQLQRLILARNKFSGQIPAGIWPELENL--VQLDLSDNDF--KGPIPNDLGEL 213 (707)
Q Consensus 144 ~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~l~~N~l~~~lp~~~~~~l~~L--~~L~ls~N~l--~~~~p~~~~~l 213 (707)
++|+|++|++++ .+|..|.++++|++|+|++|+|++ .. +..+++| ++|+|++|++ ++..|..+..+
T Consensus 124 ~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~-~~---~~~l~~L~L~~L~L~~n~l~~~~~~~~~l~~l 194 (562)
T 3a79_B 124 RHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQ-LD---LLPVAHLHLSCILLDLVSYHIKGGETESLQIP 194 (562)
T ss_dssp SEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCT-TT---TGGGTTSCEEEEEEEESSCCCCSSSCCEEEEC
T ss_pred CEEECCCCCccccCchHhhcccCcccEEecCCCcccc-Cc---hhhhhhceeeEEEeecccccccccCccccccc
Confidence 999999999996 346899999999999999999983 22 3455666 9999999988 76766666553
No 319
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.86 E-value=3.4e-22 Score=227.02 Aligned_cols=206 Identities=20% Similarity=0.249 Sum_probs=169.7
Q ss_pred CcEEEEEcCCCCccccCCCCcCCCCCCCEEEcccCCcCCCC--CccccCCCCCceEEecCccCCCCCCcccCCCCCccEE
Q 005226 69 PRVVGVAISGKNVRGYIPSELGSLIYLRRLNLHNNNLFGSL--PDQLFNATSLHSIFLYGNNLSGSLPPSVCNLPRLQNL 146 (707)
Q Consensus 69 ~~v~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~--p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 146 (707)
++++.|++++|.+.+..+. ..+++|++|+|++|++++.. |..+.++++|++|+|++|++++ +|..+..+++|+.|
T Consensus 325 ~~L~~L~l~~n~~~~~~~~--~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~-~~~~~~~l~~L~~L 401 (570)
T 2z63_A 325 KSLKRLTFTSNKGGNAFSE--VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVIT-MSSNFLGLEQLEHL 401 (570)
T ss_dssp SSCCEEEEESCBSCCBCCC--CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEE-EEEEEETCTTCCEE
T ss_pred cccCEEeCcCCcccccccc--ccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCcccc-ccccccccCCCCEE
Confidence 4555666666665554443 67888999999999888554 6778889999999999999984 45558999999999
Q ss_pred eccCCcccccCC-CCCcccchhhhhhhcCCcccccCCCcccccCCCccEEeccCCCCC-CCCCcchhhhhccccEEEecc
Q 005226 147 DLSNNSFSGSLP-DGLKNCKQLQRLILARNKFSGQIPAGIWPELENLVQLDLSDNDFK-GPIPNDLGELQSLSATLNLSY 224 (707)
Q Consensus 147 ~Ls~N~l~~~~p-~~~~~l~~L~~L~l~~N~l~~~lp~~~~~~l~~L~~L~ls~N~l~-~~~p~~~~~l~~L~~~L~l~~ 224 (707)
++++|.+.+..| ..+.++++|+.|+|++|++++.+ ...|..+++|++|+|++|+++ +.+|..+..+++| ++|+|++
T Consensus 402 ~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~-~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L-~~L~l~~ 479 (570)
T 2z63_A 402 DFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAF-NGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNL-TFLDLSQ 479 (570)
T ss_dssp ECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECC-TTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTC-CEEECTT
T ss_pred EccCCccccccchhhhhcCCCCCEEeCcCCcccccc-hhhhhcCCcCcEEECcCCcCccccchhhhhcccCC-CEEECCC
Confidence 999999997766 57889999999999999998444 455688999999999999997 5788999999999 7999999
Q ss_pred CcCcCCCCCcCCCCCCccEEEccCCcCcccCCC-CCCCCCCCCcccCCCCcccCCC
Q 005226 225 NHLSGKIPKSLGNLPVTVSFDLRGNNLSGEIPQ-TGSFANQGPTAFLSNPLLCGFP 279 (707)
Q Consensus 225 N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~-~~~~~~~~~~~~~~N~~l~~~~ 279 (707)
|++++..|..+..+++|+.|++++|++++.+|. ...+.++..+.+.+|++.|.+|
T Consensus 480 n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 535 (570)
T 2z63_A 480 CQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 535 (570)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred CccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCc
Confidence 999988899999999999999999999988775 3556778888899999888754
No 320
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.86 E-value=9.5e-22 Score=201.99 Aligned_cols=129 Identities=19% Similarity=0.210 Sum_probs=106.8
Q ss_pred cceecccCeeEEEEEEeCCCceEEEEEcCCCch------------------hhHHHHHHHHHHHHhcCCCceeeeEEEEE
Q 005226 412 AYVLGKSGLGIVYKVVLGNGIPVAVRRLGEGGE------------------QRHREFVTEVQAIAKVKHPNIVKLRAYYW 473 (707)
Q Consensus 412 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~------------------~~~~~~~~E~~~l~~l~H~niv~l~~~~~ 473 (707)
.+.||+|+||.||+|...+|+.||+|.++.... .....+.+|++++++++ | +++.+++.
T Consensus 95 ~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-~~v~~~~~ 171 (282)
T 1zar_A 95 GKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-LAVPKVYA 171 (282)
T ss_dssp EEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-SSSCCEEE
T ss_pred cCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-CCcCeEEe
Confidence 368999999999999997899999999864321 12456899999999999 4 56666443
Q ss_pred cCCcceEEEEeecCCChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEe
Q 005226 474 APDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYIS 553 (707)
Q Consensus 474 ~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~ 553 (707)
.+..++||||+++|+|.+ +.. .....++.||+.||+|||+ .+|+||||||+|||++ ++.+||+
T Consensus 172 -~~~~~lvmE~~~g~~L~~-l~~-----------~~~~~i~~qi~~~l~~lH~---~giiHrDlkp~NILl~-~~~vkl~ 234 (282)
T 1zar_A 172 -WEGNAVLMELIDAKELYR-VRV-----------ENPDEVLDMILEEVAKFYH---RGIVHGDLSQYNVLVS-EEGIWII 234 (282)
T ss_dssp -EETTEEEEECCCCEEGGG-CCC-----------SCHHHHHHHHHHHHHHHHH---TTEECSCCSTTSEEEE-TTEEEEC
T ss_pred -ccceEEEEEecCCCcHHH-cch-----------hhHHHHHHHHHHHHHHHHH---CCCEeCCCCHHHEEEE-CCcEEEE
Confidence 366799999999999998 532 1234799999999999999 8999999999999999 9999999
Q ss_pred ccccccc
Q 005226 554 DFGLSRL 560 (707)
Q Consensus 554 DfGla~~ 560 (707)
|||+|+.
T Consensus 235 DFG~a~~ 241 (282)
T 1zar_A 235 DFPQSVE 241 (282)
T ss_dssp CCTTCEE
T ss_pred ECCCCeE
Confidence 9999863
No 321
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.85 E-value=1.2e-21 Score=204.37 Aligned_cols=189 Identities=24% Similarity=0.355 Sum_probs=149.8
Q ss_pred CcEEEEEcCCCCccccCCCCcCCCCCCCEEEcccCCcCCCCCccccCCCCCceEEecCccCCCCCCcccCCCCCccEEec
Q 005226 69 PRVVGVAISGKNVRGYIPSELGSLIYLRRLNLHNNNLFGSLPDQLFNATSLHSIFLYGNNLSGSLPPSVCNLPRLQNLDL 148 (707)
Q Consensus 69 ~~v~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 148 (707)
++++.|++++|++... | .+..+++|++|+|++|+|++..+ +.++++|++|+|++|+|++ +| .+..+++|+.|+|
T Consensus 41 ~~L~~L~l~~~~i~~l-~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~l 114 (308)
T 1h6u_A 41 DGITTLSAFGTGVTTI-E-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKN-VS-AIAGLQSIKTLDL 114 (308)
T ss_dssp HTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSC-CG-GGTTCTTCCEEEC
T ss_pred CCcCEEEeeCCCccCc-h-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCC-ch-hhcCCCCCCEEEC
Confidence 4788888888888854 4 68888889999999998885444 8888889999999998884 33 6888888999999
Q ss_pred cCCcccccCCCCCcccchhhhhhhcCCcccccCCCcccccCCCccEEeccCCCCCCCCCcchhhhhccccEEEeccCcCc
Q 005226 149 SNNSFSGSLPDGLKNCKQLQRLILARNKFSGQIPAGIWPELENLVQLDLSDNDFKGPIPNDLGELQSLSATLNLSYNHLS 228 (707)
Q Consensus 149 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~lp~~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~L~l~~N~l~ 228 (707)
++|++++ ++. +..+++|+.|+|++|+++ .++. +..+++|++|+|++|++++ ++. +..+++| +.|+|++|+++
T Consensus 115 ~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~-~~~~--l~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L-~~L~l~~n~l~ 186 (308)
T 1h6u_A 115 TSTQITD-VTP-LAGLSNLQVLYLDLNQIT-NISP--LAGLTNLQYLSIGNAQVSD-LTP-LANLSKL-TTLKADDNKIS 186 (308)
T ss_dssp TTSCCCC-CGG-GTTCTTCCEEECCSSCCC-CCGG--GGGCTTCCEEECCSSCCCC-CGG-GTTCTTC-CEEECCSSCCC
T ss_pred CCCCCCC-chh-hcCCCCCCEEECCCCccC-cCcc--ccCCCCccEEEccCCcCCC-Chh-hcCCCCC-CEEECCCCccC
Confidence 9998885 443 888888999999999888 5555 5788889999999998885 443 8888888 78999999888
Q ss_pred CCCCCcCCCCCCccEEEccCCcCcccCCCCCCCCCCCCcccCCCCc
Q 005226 229 GKIPKSLGNLPVTVSFDLRGNNLSGEIPQTGSFANQGPTAFLSNPL 274 (707)
Q Consensus 229 ~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~~~~~~~~~~~~N~~ 274 (707)
+..+ +..+++|+.|++++|++++..| ...+.++..+.+.+|+.
T Consensus 187 ~~~~--l~~l~~L~~L~L~~N~l~~~~~-l~~l~~L~~L~l~~N~i 229 (308)
T 1h6u_A 187 DISP--LASLPNLIEVHLKNNQISDVSP-LANTSNLFIVTLTNQTI 229 (308)
T ss_dssp CCGG--GGGCTTCCEEECTTSCCCBCGG-GTTCTTCCEEEEEEEEE
T ss_pred cChh--hcCCCCCCEEEccCCccCcccc-ccCCCCCCEEEccCCee
Confidence 5444 7788889999999998887664 55666777777777764
No 322
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.85 E-value=1e-21 Score=209.80 Aligned_cols=177 Identities=25% Similarity=0.243 Sum_probs=96.2
Q ss_pred CCceeceeEeCC-----CCCCCCCcEEEEEcCCCCccccCCCCcC-CCCCCCEEEcccCCcCCCCCccccCCCCCceEEe
Q 005226 51 TPCRWSGISCMN-----ITGFPDPRVVGVAISGKNVRGYIPSELG-SLIYLRRLNLHNNNLFGSLPDQLFNATSLHSIFL 124 (707)
Q Consensus 51 ~~C~w~gv~c~~-----~~~~~~~~v~~L~L~~n~l~~~~~~~l~-~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 124 (707)
|.|.|..|.|.. .|...+..++.|+|++|+|++..+..|. ++++|++|+|++|+|++..+..|.++++|++|+|
T Consensus 16 C~C~~~~l~c~~~~l~~iP~~~~~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~L 95 (361)
T 2xot_A 16 CLCASNILSCSKQQLPNVPQSLPSYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDL 95 (361)
T ss_dssp CEEETTEEECCSSCCSSCCSSCCTTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEEC
T ss_pred CEECCCEEEeCCCCcCccCccCCCCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEEC
Confidence 346666666653 1222234455566666666655555555 5666666666666665555555556666666666
Q ss_pred cCccCCCCCCcccCCCCCccEEeccCCcccccCCCCCcccchhhhhhhcCCcccccCCCccc---ccCCCccEEeccCCC
Q 005226 125 YGNNLSGSLPPSVCNLPRLQNLDLSNNSFSGSLPDGLKNCKQLQRLILARNKFSGQIPAGIW---PELENLVQLDLSDND 201 (707)
Q Consensus 125 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~lp~~~~---~~l~~L~~L~ls~N~ 201 (707)
++|+|++..+..|..+++|+.|+|++|+|++..|..|.++++|+.|+|++|+|+ .+|..+| ..+++|+.|+|++|+
T Consensus 96 s~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~~~~l~~L~~L~L~~N~ 174 (361)
T 2xot_A 96 SSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQIS-RFPVELIKDGNKLPKLMLLDLSSNK 174 (361)
T ss_dssp CSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCC-SCCGGGTC----CTTCCEEECCSSC
T ss_pred CCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCC-eeCHHHhcCcccCCcCCEEECCCCC
Confidence 666665444445555666666666666665555555555666666666666665 5555554 345555555555555
Q ss_pred CCCCCCcchhhhhcc-ccEEEeccCcCc
Q 005226 202 FKGPIPNDLGELQSL-SATLNLSYNHLS 228 (707)
Q Consensus 202 l~~~~p~~~~~l~~L-~~~L~l~~N~l~ 228 (707)
|++..+..+..++.+ ++.|+|++|.+.
T Consensus 175 l~~l~~~~~~~l~~~~l~~l~l~~N~~~ 202 (361)
T 2xot_A 175 LKKLPLTDLQKLPAWVKNGLYLHNNPLE 202 (361)
T ss_dssp CCCCCHHHHHHSCHHHHTTEECCSSCEE
T ss_pred CCccCHHHhhhccHhhcceEEecCCCcc
Confidence 554333444444432 134555555444
No 323
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.85 E-value=8.1e-22 Score=221.38 Aligned_cols=138 Identities=21% Similarity=0.170 Sum_probs=121.2
Q ss_pred CCcEEEEEcCCCCccccCCCCcCCCCCCCEEEcccCCcCCCCCccccCCCCCceEEecCccCCCCCCcccCCCCCccEEe
Q 005226 68 DPRVVGVAISGKNVRGYIPSELGSLIYLRRLNLHNNNLFGSLPDQLFNATSLHSIFLYGNNLSGSLPPSVCNLPRLQNLD 147 (707)
Q Consensus 68 ~~~v~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 147 (707)
.++++.|+|++|++++..|..|.++++|++|+|++|+|++..|..|.++++|++|||++|+|+ .+|.. .+++|++|+
T Consensus 20 ~~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~ 96 (520)
T 2z7x_B 20 SQKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLV-KISCH--PTVNLKHLD 96 (520)
T ss_dssp CTTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCC-EEECC--CCCCCSEEE
T ss_pred cccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCcee-ecCcc--ccCCccEEe
Confidence 378999999999999888889999999999999999999888999999999999999999999 67776 899999999
Q ss_pred ccCCcccc-cCCCCCcccchhhhhhhcCCcccccCCCcccccCCCc--cEEeccCCCC--CCCCCcchhh
Q 005226 148 LSNNSFSG-SLPDGLKNCKQLQRLILARNKFSGQIPAGIWPELENL--VQLDLSDNDF--KGPIPNDLGE 212 (707)
Q Consensus 148 Ls~N~l~~-~~p~~~~~l~~L~~L~l~~N~l~~~lp~~~~~~l~~L--~~L~ls~N~l--~~~~p~~~~~ 212 (707)
|++|++++ .+|..|.++++|++|+|++|+|++ ..+..+++| +.|+|++|.+ .+..|..+..
T Consensus 97 L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~----~~~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~ 162 (520)
T 2z7x_B 97 LSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK----SSVLPIAHLNISKVLLVLGETYGEKEDPEGLQD 162 (520)
T ss_dssp CCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG----GGGGGGTTSCEEEEEEEECTTTTSSCCTTTTTT
T ss_pred ccCCccccccchhhhccCCcceEEEecCcccch----hhccccccceeeEEEeecccccccccccccccc
Confidence 99999997 478999999999999999999984 235677788 9999999988 6666666655
No 324
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.85 E-value=2.6e-21 Score=219.66 Aligned_cols=183 Identities=21% Similarity=0.217 Sum_probs=161.1
Q ss_pred CCCCCCcEEEEEcCCCCccccCCCCcCCCCCCCEEEcccCCcCCCCCccccCCCCCceEEecCccCCCCCCcccCCCCCc
Q 005226 64 TGFPDPRVVGVAISGKNVRGYIPSELGSLIYLRRLNLHNNNLFGSLPDQLFNATSLHSIFLYGNNLSGSLPPSVCNLPRL 143 (707)
Q Consensus 64 ~~~~~~~v~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 143 (707)
|...+.+++.|+|++|++++..+..|.++++|++|+|++|+|++..|..|.++++|++|+|++|++++..|..|.++++|
T Consensus 23 p~~l~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L 102 (570)
T 2z63_A 23 PDNLPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSL 102 (570)
T ss_dssp CSSSCSSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTC
T ss_pred CCCccccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCcccc
Confidence 33345789999999999999999999999999999999999998888899999999999999999998888999999999
Q ss_pred cEEeccCCcccccCCCCCcccchhhhhhhcCCcccc-cCCCcccccCCCccEEeccCCCCCCCCCcchhhhhcc----cc
Q 005226 144 QNLDLSNNSFSGSLPDGLKNCKQLQRLILARNKFSG-QIPAGIWPELENLVQLDLSDNDFKGPIPNDLGELQSL----SA 218 (707)
Q Consensus 144 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~-~lp~~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L----~~ 218 (707)
++|+|++|++++..+..|.++++|++|+|++|++++ .+|.. |..+++|++|++++|++++..|..+..+++| .
T Consensus 103 ~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~- 180 (570)
T 2z63_A 103 QKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEY-FSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNL- 180 (570)
T ss_dssp CEEECTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGG-GGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCC-
T ss_pred ccccccccccccCCCccccccccccEEecCCCccceecChhh-hcccCCCCEEeCcCCccceecHHHccchhccchhhh-
Confidence 999999999996666689999999999999999984 36665 5799999999999999998888889998887 4
Q ss_pred EEEeccCcCcCCCCCcCCCCCCccEEEccCC
Q 005226 219 TLNLSYNHLSGKIPKSLGNLPVTVSFDLRGN 249 (707)
Q Consensus 219 ~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N 249 (707)
.|++++|.+++..|..+..+ +|+.|++++|
T Consensus 181 ~L~l~~n~l~~~~~~~~~~~-~L~~L~l~~n 210 (570)
T 2z63_A 181 SLDLSLNPMNFIQPGAFKEI-RLHKLTLRNN 210 (570)
T ss_dssp EEECTTCCCCEECTTTTTTC-EEEEEEEESC
T ss_pred hcccCCCCceecCHHHhccC-cceeEecccc
Confidence 79999999887777666554 6777777666
No 325
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.85 E-value=3e-21 Score=190.96 Aligned_cols=148 Identities=23% Similarity=0.277 Sum_probs=100.9
Q ss_pred CCCCccccCCCCcCCCCCCCEEEcccCCcCCCCCccccCCCCCceEEecCccCCCCCCcccCCCCCccEEeccCCccccc
Q 005226 77 SGKNVRGYIPSELGSLIYLRRLNLHNNNLFGSLPDQLFNATSLHSIFLYGNNLSGSLPPSVCNLPRLQNLDLSNNSFSGS 156 (707)
Q Consensus 77 ~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 156 (707)
++++++ .+|..+. ++|+.|+|++|+|++..+..|.++++|++|+|++|+|++..|..|.++++|++|+|++|+|+
T Consensus 19 ~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~-- 93 (220)
T 2v9t_B 19 RGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKIT-- 93 (220)
T ss_dssp TTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCC--
T ss_pred CCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCC--
Confidence 345555 3454443 56777777777776555556666666666666666666555666666666666666666555
Q ss_pred CCCCCcccchhhhhhhcCCcccccCCCcccccCCCccEEeccCCCCCCCCCcchhhhhccccEEEeccCcCcCCCCCcCC
Q 005226 157 LPDGLKNCKQLQRLILARNKFSGQIPAGIWPELENLVQLDLSDNDFKGPIPNDLGELQSLSATLNLSYNHLSGKIPKSLG 236 (707)
Q Consensus 157 ~p~~~~~l~~L~~L~l~~N~l~~~lp~~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~L~l~~N~l~~~~p~~~~ 236 (707)
.+|...|..+++|++|+|++|+|++..|..|.++++| +.|+|++|+|++..+..|.
T Consensus 94 -----------------------~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L-~~L~L~~N~l~~~~~~~~~ 149 (220)
T 2v9t_B 94 -----------------------ELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNL-NLLSLYDNKLQTIAKGTFS 149 (220)
T ss_dssp -----------------------CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTC-CEEECCSSCCSCCCTTTTT
T ss_pred -----------------------ccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCC-CEEECCCCcCCEECHHHHh
Confidence 5666666677777777777777777777777777777 6888888888876667777
Q ss_pred CCCCccEEEccCCcCcc
Q 005226 237 NLPVTVSFDLRGNNLSG 253 (707)
Q Consensus 237 ~l~~L~~l~l~~N~l~~ 253 (707)
.+++|+.|++++|++..
T Consensus 150 ~l~~L~~L~L~~N~~~c 166 (220)
T 2v9t_B 150 PLRAIQTMHLAQNPFIC 166 (220)
T ss_dssp TCTTCCEEECCSSCEEC
T ss_pred CCCCCCEEEeCCCCcCC
Confidence 78888888888887764
No 326
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.85 E-value=2.8e-21 Score=191.19 Aligned_cols=153 Identities=24% Similarity=0.356 Sum_probs=135.0
Q ss_pred CCCceeceeEeCC-----CCCCCCCcEEEEEcCCCCccccCCCCcCCCCCCCEEEcccCCcCCCCCccccCCCCCceEEe
Q 005226 50 PTPCRWSGISCMN-----ITGFPDPRVVGVAISGKNVRGYIPSELGSLIYLRRLNLHNNNLFGSLPDQLFNATSLHSIFL 124 (707)
Q Consensus 50 ~~~C~w~gv~c~~-----~~~~~~~~v~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 124 (707)
.|.|.|..|.|.+ .|...+.+++.|+|++|+|++..+..|..+++|++|+|++|+|++..|..|.++++|++|+|
T Consensus 8 ~C~C~~~~v~c~~~~l~~iP~~l~~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L 87 (220)
T 2v9t_B 8 ACTCSNNIVDCRGKGLTEIPTNLPETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVL 87 (220)
T ss_dssp TSEEETTEEECTTSCCSSCCSSCCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEEC
T ss_pred CCEECCCEEEcCCCCcCcCCCccCcCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEEC
Confidence 3668999999974 23333468999999999999998889999999999999999999988999999999999999
Q ss_pred cCccCCCCCCcccCCCCCccEEeccCCcccccCCCCCcccchhhhhhhcCCcccccCCCcccccCCCccEEeccCCCCC
Q 005226 125 YGNNLSGSLPPSVCNLPRLQNLDLSNNSFSGSLPDGLKNCKQLQRLILARNKFSGQIPAGIWPELENLVQLDLSDNDFK 203 (707)
Q Consensus 125 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~lp~~~~~~l~~L~~L~ls~N~l~ 203 (707)
++|+|+...+..|..+++|+.|+|++|+|++..|..|.++++|+.|+|++|+|+ .++...|..+++|+.|+|++|.+.
T Consensus 88 s~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~L~~N~~~ 165 (220)
T 2v9t_B 88 YGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQ-TIAKGTFSPLRAIQTMHLAQNPFI 165 (220)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCS-CCCTTTTTTCTTCCEEECCSSCEE
T ss_pred CCCcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCC-EECHHHHhCCCCCCEEEeCCCCcC
Confidence 999999666667899999999999999999888888988999999999999988 777777778888888888888876
No 327
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.85 E-value=4.1e-22 Score=225.34 Aligned_cols=198 Identities=23% Similarity=0.294 Sum_probs=171.4
Q ss_pred CcEEEEEcCCCCccccCCCCc-CCCCCCCEEEcccCCcCCCCCc---cccCCCCCceEEecCccCCCCCC--cccCCCCC
Q 005226 69 PRVVGVAISGKNVRGYIPSEL-GSLIYLRRLNLHNNNLFGSLPD---QLFNATSLHSIFLYGNNLSGSLP--PSVCNLPR 142 (707)
Q Consensus 69 ~~v~~L~L~~n~l~~~~~~~l-~~l~~L~~L~L~~N~l~~~~p~---~~~~l~~L~~L~L~~N~l~~~~p--~~~~~l~~ 142 (707)
++++.|+|++|.+. .+|..+ ..+++|++|+|++|++++.+|. .+..+++|++|+|++|+|++..+ ..+..+++
T Consensus 310 ~~L~~L~l~~n~l~-~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~ 388 (549)
T 2z81_A 310 EKVKRITVENSKVF-LVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKN 388 (549)
T ss_dssp TTCCEEEEESSCCC-CCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCTT
T ss_pred ccceEEEeccCccc-cCCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEEccCCcccccccchhhhhcCCC
Confidence 57899999999987 566666 5799999999999999987643 47889999999999999995432 46899999
Q ss_pred ccEEeccCCcccccCCCCCcccchhhhhhhcCCcccccCCCcccccCCCccEEeccCCCCCCCCCcchhhhhccccEEEe
Q 005226 143 LQNLDLSNNSFSGSLPDGLKNCKQLQRLILARNKFSGQIPAGIWPELENLVQLDLSDNDFKGPIPNDLGELQSLSATLNL 222 (707)
Q Consensus 143 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~lp~~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~L~l 222 (707)
|++|+|++|+|+ .+|..+..+++|++|+|++|+|+ .+|..++ ++|++|+|++|+|++.+ ..+++| ++|+|
T Consensus 389 L~~L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~-~l~~~~~---~~L~~L~Ls~N~l~~~~----~~l~~L-~~L~L 458 (549)
T 2z81_A 389 LTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIR-VVKTCIP---QTLEVLDVSNNNLDSFS----LFLPRL-QELYI 458 (549)
T ss_dssp CCEEECTTCCCC-CCCSCCCCCTTCCEEECTTSCCS-CCCTTSC---TTCSEEECCSSCCSCCC----CCCTTC-CEEEC
T ss_pred CCEEECCCCCCc-cCChhhcccccccEEECCCCCcc-cccchhc---CCceEEECCCCChhhhc----ccCChh-cEEEC
Confidence 999999999999 78999999999999999999998 7887653 68999999999999643 467889 79999
Q ss_pred ccCcCcCCCCCcCCCCCCccEEEccCCcCcccCCC-CCCCCCCCCcccCCCCcccCCC
Q 005226 223 SYNHLSGKIPKSLGNLPVTVSFDLRGNNLSGEIPQ-TGSFANQGPTAFLSNPLLCGFP 279 (707)
Q Consensus 223 ~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~-~~~~~~~~~~~~~~N~~l~~~~ 279 (707)
++|+|+ .+|. ...+++|+.|++++|++++.+|. ...+.++..+.+.+||+.|.+|
T Consensus 459 s~N~l~-~ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 514 (549)
T 2z81_A 459 SRNKLK-TLPD-ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 514 (549)
T ss_dssp CSSCCS-SCCC-GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCCHH
T ss_pred CCCccC-cCCC-cccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCCCc
Confidence 999999 6887 46799999999999999998885 4567788889999999988754
No 328
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.85 E-value=2.3e-21 Score=194.43 Aligned_cols=174 Identities=16% Similarity=0.201 Sum_probs=157.1
Q ss_pred CcEEEEEcCCCC-ccccCCCCcCCCCCCCEEEccc-CCcCCCCCccccCCCCCceEEecCccCCCCCCcccCCCCCcc--
Q 005226 69 PRVVGVAISGKN-VRGYIPSELGSLIYLRRLNLHN-NNLFGSLPDQLFNATSLHSIFLYGNNLSGSLPPSVCNLPRLQ-- 144 (707)
Q Consensus 69 ~~v~~L~L~~n~-l~~~~~~~l~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~-- 144 (707)
++++.|+|++|+ ++++.+..|.++++|++|+|++ |+|++..+..|.++++|++|+|++|+|++ +|. |..+++|+
T Consensus 55 ~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~L 132 (239)
T 2xwt_C 55 PNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLKM-FPD-LTKVYSTDIF 132 (239)
T ss_dssp TTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEEEEEECCCS-CCC-CTTCCBCCSE
T ss_pred CCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCcc-ccc-cccccccccc
Confidence 689999999997 9888888999999999999999 99998778899999999999999999995 776 88999998
Q ss_pred -EEeccCC-cccccCCCCCcccchhh-hhhhcCCcccccCCCcccccCCCccEEeccCCC-CCCCCCcchhhh-hccccE
Q 005226 145 -NLDLSNN-SFSGSLPDGLKNCKQLQ-RLILARNKFSGQIPAGIWPELENLVQLDLSDND-FKGPIPNDLGEL-QSLSAT 219 (707)
Q Consensus 145 -~L~Ls~N-~l~~~~p~~~~~l~~L~-~L~l~~N~l~~~lp~~~~~~l~~L~~L~ls~N~-l~~~~p~~~~~l-~~L~~~ 219 (707)
.|++++| ++++..+..|.++++|+ .|+|++|+++ .+|...|.. ++|+.|+|++|+ +++..+..|.++ ++| +.
T Consensus 133 ~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~-~i~~~~~~~-~~L~~L~L~~n~~l~~i~~~~~~~l~~~L-~~ 209 (239)
T 2xwt_C 133 FILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SVQGYAFNG-TKLDAVYLNKNKYLTVIDKDAFGGVYSGP-SL 209 (239)
T ss_dssp EEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC-EECTTTTTT-CEEEEEECTTCTTCCEECTTTTTTCSBCC-SE
T ss_pred cEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc-ccCHhhcCC-CCCCEEEcCCCCCcccCCHHHhhccccCC-cE
Confidence 9999999 99977777899999999 9999999999 999988866 899999999995 997667889999 999 89
Q ss_pred EEeccCcCcCCCCCcCCCCCCccEEEccCCc
Q 005226 220 LNLSYNHLSGKIPKSLGNLPVTVSFDLRGNN 250 (707)
Q Consensus 220 L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~ 250 (707)
|++++|+|+ .+|.. .+++|+.|+++++.
T Consensus 210 L~l~~N~l~-~l~~~--~~~~L~~L~l~~~~ 237 (239)
T 2xwt_C 210 LDVSQTSVT-ALPSK--GLEHLKELIARNTW 237 (239)
T ss_dssp EECTTCCCC-CCCCT--TCTTCSEEECTTC-
T ss_pred EECCCCccc-cCChh--HhccCceeeccCcc
Confidence 999999999 45654 68899999998863
No 329
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.84 E-value=4.9e-21 Score=189.41 Aligned_cols=155 Identities=19% Similarity=0.223 Sum_probs=105.4
Q ss_pred EEEcCCCCccccCCCCcCCCCCCCEEEcccCCcCCCCC-ccccCCCCCceEEecCccCCCCCCcccCCCCCccEEeccCC
Q 005226 73 GVAISGKNVRGYIPSELGSLIYLRRLNLHNNNLFGSLP-DQLFNATSLHSIFLYGNNLSGSLPPSVCNLPRLQNLDLSNN 151 (707)
Q Consensus 73 ~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 151 (707)
.|++++|+++. +|..+. ..+++|+|++|+|++..| ..|.++++|++|+|++|+|++..+..|..+++|++|+|++|
T Consensus 15 ~l~~s~n~l~~-iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 91 (220)
T 2v70_A 15 TVDCSNQKLNK-IPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSN 91 (220)
T ss_dssp EEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EeEeCCCCccc-CccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCC
Confidence 34556666664 455443 345677777777775543 33556666666666666666555555666666666666655
Q ss_pred cccccCCCCCcccchhhhhhhcCCcccccCCCcccccCCCccEEeccCCCCCCCCCcchhhhhccccEEEeccCcCcCCC
Q 005226 152 SFSGSLPDGLKNCKQLQRLILARNKFSGQIPAGIWPELENLVQLDLSDNDFKGPIPNDLGELQSLSATLNLSYNHLSGKI 231 (707)
Q Consensus 152 ~l~~~~p~~~~~l~~L~~L~l~~N~l~~~lp~~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~L~l~~N~l~~~~ 231 (707)
+|+ .++...|..+++|++|+|++|+|++..|..|.++++| +.|+|++|+|++..
T Consensus 92 ~l~-------------------------~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L-~~L~L~~N~l~~~~ 145 (220)
T 2v70_A 92 RLE-------------------------NVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSV-RLLSLYDNQITTVA 145 (220)
T ss_dssp CCC-------------------------CCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTC-SEEECTTSCCCCBC
T ss_pred ccC-------------------------ccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccC-CEEECCCCcCCEEC
Confidence 555 5555556677777788888888877777778888888 68888888888777
Q ss_pred CCcCCCCCCccEEEccCCcCcccCC
Q 005226 232 PKSLGNLPVTVSFDLRGNNLSGEIP 256 (707)
Q Consensus 232 p~~~~~l~~L~~l~l~~N~l~~~~p 256 (707)
|..|..+++|+.|++++|++++..+
T Consensus 146 ~~~~~~l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 146 PGAFDTLHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp TTTTTTCTTCCEEECCSCCEECSGG
T ss_pred HHHhcCCCCCCEEEecCcCCcCCCc
Confidence 8888888888888888888876543
No 330
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.84 E-value=2.9e-22 Score=232.57 Aligned_cols=219 Identities=19% Similarity=0.246 Sum_probs=123.1
Q ss_pred CcccHHHHHHHHhcCcCCCCCCCCCCCCCCCCCceeceeEeCCCC------------CCCCCcEEEEEcCCCCccc----
Q 005226 20 LSPDGLTLLSLKSAIDQTDTSVFADWNENDPTPCRWSGISCMNIT------------GFPDPRVVGVAISGKNVRG---- 83 (707)
Q Consensus 20 ~~~d~~~l~~~k~~~~~~~~~~~~~W~~~~~~~C~w~gv~c~~~~------------~~~~~~v~~L~L~~n~l~~---- 83 (707)
...+..+|+++..++..+.+..-..|......++.|.++.++... ......+..++|+.|.|.+
T Consensus 130 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~L~~n~~~~~~~~~l~~l~Ls~~~i~~~~~~ 209 (727)
T 4b8c_D 130 VDCTKQALMEMADTLTDSKTAKKQQPTGDSTPSGTATNSAVSTPLTPKIELFANGKDEANQALLQHKKLSQYSIDEDDDI 209 (727)
T ss_dssp --CCCHHHHHHHHHHHHHHTTC----------------------------------------------------------
T ss_pred cccchhhhhhhhhhcccccCcccCCCcCCCCccccCCCceecCCccceEEeeCCCCCcchhhHhhcCccCcccccCcccc
Confidence 357889999999887545555556676554456789888776510 0011223334444444433
Q ss_pred -----cCCCCcCCCCCCCEEEcccCCcCCCCCccccCCCCCceEEecCccCCCCCCcccCCCCCccEEeccCCcccccCC
Q 005226 84 -----YIPSELGSLIYLRRLNLHNNNLFGSLPDQLFNATSLHSIFLYGNNLSGSLPPSVCNLPRLQNLDLSNNSFSGSLP 158 (707)
Q Consensus 84 -----~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 158 (707)
..+..|..+++|+.|+|++|.|. .+|..++++++|++|+|++|+|+ .+|..|++|++|+.|+|++|+|+ .+|
T Consensus 210 ~n~~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp 286 (727)
T 4b8c_D 210 ENRMVMPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLP 286 (727)
T ss_dssp ------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCC
T ss_pred ccceecChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccC
Confidence 23666777788888888888887 67777778888888888888888 77877888888888888888888 678
Q ss_pred CCCcccchhhhhhhcCCcccccCCCcccccCCCccEEeccCCCCCCCCCcchhhhhccccEEEeccCcCcCCCCCcCCCC
Q 005226 159 DGLKNCKQLQRLILARNKFSGQIPAGIWPELENLVQLDLSDNDFKGPIPNDLGELQSLSATLNLSYNHLSGKIPKSLGNL 238 (707)
Q Consensus 159 ~~~~~l~~L~~L~l~~N~l~~~lp~~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~L~l~~N~l~~~~p~~~~~l 238 (707)
..|.+|++|++|+|++|+|+ .||.. |..+++|++|+|++|+|++.+|..+..+......|+|++|.+++.+|..+
T Consensus 287 ~~~~~l~~L~~L~L~~N~l~-~lp~~-~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~l--- 361 (727)
T 4b8c_D 287 AELGSCFQLKYFYFFDNMVT-TLPWE-FGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHER--- 361 (727)
T ss_dssp SSGGGGTTCSEEECCSSCCC-CCCSS-TTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC----
T ss_pred hhhcCCCCCCEEECCCCCCC-ccChh-hhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCcccc---
Confidence 88888888888888888887 77776 57788888888888888877777776654332246788888887777654
Q ss_pred CCccEEEccCC
Q 005226 239 PVTVSFDLRGN 249 (707)
Q Consensus 239 ~~L~~l~l~~N 249 (707)
..|+++.|
T Consensus 362 ---~~l~l~~n 369 (727)
T 4b8c_D 362 ---RFIEINTD 369 (727)
T ss_dssp -----------
T ss_pred ---ceeEeecc
Confidence 34455555
No 331
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.84 E-value=5.3e-21 Score=199.44 Aligned_cols=171 Identities=22% Similarity=0.360 Sum_probs=152.1
Q ss_pred CcEEEEEcCCCCccccCCCCcCCCCCCCEEEcccCCcCCCCCccccCCCCCceEEecCccCCCCCCcccCCCCCccEEec
Q 005226 69 PRVVGVAISGKNVRGYIPSELGSLIYLRRLNLHNNNLFGSLPDQLFNATSLHSIFLYGNNLSGSLPPSVCNLPRLQNLDL 148 (707)
Q Consensus 69 ~~v~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 148 (707)
++++.|+|++|++.+..+ +..+++|++|+|++|+|++ ++ .+.++++|++|+|++|+|++ +|. +..+++|+.|+|
T Consensus 63 ~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l 136 (308)
T 1h6u_A 63 NNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKN-VS-AIAGLQSIKTLDLTSTQITD-VTP-LAGLSNLQVLYL 136 (308)
T ss_dssp TTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSC-CG-GGTTCTTCCEEECTTSCCCC-CGG-GTTCTTCCEEEC
T ss_pred CCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCC-ch-hhcCCCCCCEEECCCCCCCC-chh-hcCCCCCCEEEC
Confidence 689999999999997655 9999999999999999995 34 69999999999999999995 444 999999999999
Q ss_pred cCCcccccCCCCCcccchhhhhhhcCCcccccCCCcccccCCCccEEeccCCCCCCCCCcchhhhhccccEEEeccCcCc
Q 005226 149 SNNSFSGSLPDGLKNCKQLQRLILARNKFSGQIPAGIWPELENLVQLDLSDNDFKGPIPNDLGELQSLSATLNLSYNHLS 228 (707)
Q Consensus 149 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~lp~~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~L~l~~N~l~ 228 (707)
++|++++..+ +.++++|+.|+|++|+++ .++. +..+++|+.|+|++|++++. +. +..+++| +.|+|++|+++
T Consensus 137 ~~n~l~~~~~--l~~l~~L~~L~l~~n~l~-~~~~--l~~l~~L~~L~l~~n~l~~~-~~-l~~l~~L-~~L~L~~N~l~ 208 (308)
T 1h6u_A 137 DLNQITNISP--LAGLTNLQYLSIGNAQVS-DLTP--LANLSKLTTLKADDNKISDI-SP-LASLPNL-IEVHLKNNQIS 208 (308)
T ss_dssp CSSCCCCCGG--GGGCTTCCEEECCSSCCC-CCGG--GTTCTTCCEEECCSSCCCCC-GG-GGGCTTC-CEEECTTSCCC
T ss_pred CCCccCcCcc--ccCCCCccEEEccCCcCC-CChh--hcCCCCCCEEECCCCccCcC-hh-hcCCCCC-CEEEccCCccC
Confidence 9999995544 899999999999999999 6666 68999999999999999954 43 8999999 89999999999
Q ss_pred CCCCCcCCCCCCccEEEccCCcCcccC
Q 005226 229 GKIPKSLGNLPVTVSFDLRGNNLSGEI 255 (707)
Q Consensus 229 ~~~p~~~~~l~~L~~l~l~~N~l~~~~ 255 (707)
+..| +..+++|+.|++++|++++..
T Consensus 209 ~~~~--l~~l~~L~~L~l~~N~i~~~~ 233 (308)
T 1h6u_A 209 DVSP--LANTSNLFIVTLTNQTITNQP 233 (308)
T ss_dssp BCGG--GTTCTTCCEEEEEEEEEECCC
T ss_pred cccc--ccCCCCCCEEEccCCeeecCC
Confidence 6553 899999999999999998643
No 332
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.84 E-value=2.8e-22 Score=222.52 Aligned_cols=180 Identities=24% Similarity=0.256 Sum_probs=146.2
Q ss_pred CcEEEEEcCCCCccccCCCCcCCCCCCCEEEcccCCcCCCCCc----------------cccCCCCCceEEecCccCCCC
Q 005226 69 PRVVGVAISGKNVRGYIPSELGSLIYLRRLNLHNNNLFGSLPD----------------QLFNATSLHSIFLYGNNLSGS 132 (707)
Q Consensus 69 ~~v~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~----------------~~~~l~~L~~L~L~~N~l~~~ 132 (707)
++++.|+|++|.+++..| |..+++|++|+|++|.|++..+. ....+++|+.|+|++|+|++.
T Consensus 58 ~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~~~~L~~L~L~~N~l~~~~~~~l~~L~~L~L~~N~l~~~ 135 (487)
T 3oja_A 58 TKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLVGPSIETLHAANNNISRVSCSRGQGKKNIYLANNKITML 135 (487)
T ss_dssp TTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEECTTCCEEECCSSCCCCEEECCCSSCEEEECCSSCCCSG
T ss_pred CCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCCCCCcCEEECcCCcCCCCCccccCCCCEEECCCCCCCCC
Confidence 456666676666666554 66666666666666655532110 112467899999999999988
Q ss_pred CCcccCCCCCccEEeccCCcccccCCCCCc-ccchhhhhhhcCCcccccCCCcccccCCCccEEeccCCCCCCCCCcchh
Q 005226 133 LPPSVCNLPRLQNLDLSNNSFSGSLPDGLK-NCKQLQRLILARNKFSGQIPAGIWPELENLVQLDLSDNDFKGPIPNDLG 211 (707)
Q Consensus 133 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~l~~N~l~~~lp~~~~~~l~~L~~L~ls~N~l~~~~p~~~~ 211 (707)
.|..|+.+++|+.|+|++|.|++..|..+. .+++|+.|+|++|+|+ .+|... .+++|++|+|++|.|++ +|..+.
T Consensus 136 ~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~-~~~~~~--~l~~L~~L~Ls~N~l~~-~~~~~~ 211 (487)
T 3oja_A 136 RDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIY-DVKGQV--VFAKLKTLDLSSNKLAF-MGPEFQ 211 (487)
T ss_dssp GGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCC-EEECCC--CCTTCCEEECCSSCCCE-ECGGGG
T ss_pred CchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccc-cccccc--cCCCCCEEECCCCCCCC-CCHhHc
Confidence 899999999999999999999998898886 8999999999999999 555433 58999999999999996 555699
Q ss_pred hhhccccEEEeccCcCcCCCCCcCCCCCCccEEEccCCcCc-ccCC
Q 005226 212 ELQSLSATLNLSYNHLSGKIPKSLGNLPVTVSFDLRGNNLS-GEIP 256 (707)
Q Consensus 212 ~l~~L~~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~-~~~p 256 (707)
.+++| +.|+|++|.|++ +|..+..+++|+.|++++|++. +.+|
T Consensus 212 ~l~~L-~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c~~~~ 255 (487)
T 3oja_A 212 SAAGV-TWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLR 255 (487)
T ss_dssp GGTTC-SEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCHHHHH
T ss_pred CCCCc-cEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcCcchH
Confidence 99999 799999999995 8888999999999999999998 4444
No 333
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.84 E-value=1.7e-20 Score=186.77 Aligned_cols=156 Identities=21% Similarity=0.267 Sum_probs=142.4
Q ss_pred CCEEEcccCCcCCCCCccccCCCCCceEEecCccCCCCCCcccCCCCCccEEeccCCcccccCCCCCcccchhhhhhhcC
Q 005226 95 LRRLNLHNNNLFGSLPDQLFNATSLHSIFLYGNNLSGSLPPSVCNLPRLQNLDLSNNSFSGSLPDGLKNCKQLQRLILAR 174 (707)
Q Consensus 95 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~ 174 (707)
.+.++.++|+++ .+|..+. ++|++|+|++|+|++..|..|..+++|+.|+|++|+|+...+..|.++++|+.|+|++
T Consensus 21 ~~~v~c~~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~ 97 (229)
T 3e6j_A 21 GTTVDCRSKRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGT 97 (229)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEeEccCCCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCC
Confidence 357899999998 6776554 8999999999999998899999999999999999999866667789999999999999
Q ss_pred CcccccCCCcccccCCCccEEeccCCCCCCCCCcchhhhhccccEEEeccCcCcCCCCCcCCCCCCccEEEccCCcCccc
Q 005226 175 NKFSGQIPAGIWPELENLVQLDLSDNDFKGPIPNDLGELQSLSATLNLSYNHLSGKIPKSLGNLPVTVSFDLRGNNLSGE 254 (707)
Q Consensus 175 N~l~~~lp~~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~ 254 (707)
|+|+ .+|...|..+++|++|+|++|+|+ .+|..+..+++| +.|+|++|+|++..+..+..+++|+.|++++|++.+.
T Consensus 98 N~l~-~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L-~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 174 (229)
T 3e6j_A 98 NQLT-VLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHL-THLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCE 174 (229)
T ss_dssp SCCC-CCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTC-SEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTT
T ss_pred CcCC-ccChhHhCcchhhCeEeccCCccc-ccCcccccCCCC-CEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCC
Confidence 9999 888888899999999999999999 789999999999 7999999999977778899999999999999999876
Q ss_pred CC
Q 005226 255 IP 256 (707)
Q Consensus 255 ~p 256 (707)
.+
T Consensus 175 c~ 176 (229)
T 3e6j_A 175 CR 176 (229)
T ss_dssp BG
T ss_pred cc
Confidence 54
No 334
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.83 E-value=9.1e-21 Score=187.47 Aligned_cols=156 Identities=20% Similarity=0.267 Sum_probs=132.9
Q ss_pred CCCceeceeEeCC-----CCCCCCCcEEEEEcCCCCccccCC-CCcCCCCCCCEEEcccCCcCCCCCccccCCCCCceEE
Q 005226 50 PTPCRWSGISCMN-----ITGFPDPRVVGVAISGKNVRGYIP-SELGSLIYLRRLNLHNNNLFGSLPDQLFNATSLHSIF 123 (707)
Q Consensus 50 ~~~C~w~gv~c~~-----~~~~~~~~v~~L~L~~n~l~~~~~-~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 123 (707)
.|.|.|..+.|++ .|...+..++.|+|++|+|++..+ ..|..+++|++|+|++|+|++..+..|.++++|++|+
T Consensus 8 ~C~C~~~~l~~s~n~l~~iP~~~~~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~ 87 (220)
T 2v70_A 8 KCRCEGTTVDCSNQKLNKIPEHIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEIL 87 (220)
T ss_dssp TCEEETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEE
T ss_pred CCEECCCEeEeCCCCcccCccCCCCCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEE
Confidence 3568999999974 233334578999999999998865 5589999999999999999988888999999999999
Q ss_pred ecCccCCCCCCcccCCCCCccEEeccCCcccccCCCCCcccchhhhhhhcCCcccccCCCcccccCCCccEEeccCCCCC
Q 005226 124 LYGNNLSGSLPPSVCNLPRLQNLDLSNNSFSGSLPDGLKNCKQLQRLILARNKFSGQIPAGIWPELENLVQLDLSDNDFK 203 (707)
Q Consensus 124 L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~lp~~~~~~l~~L~~L~ls~N~l~ 203 (707)
|++|+|++..|..|..+++|++|+|++|+|++..|..|.++++|+.|+|++|+|+ .++...|..+++|+.|+|++|.+.
T Consensus 88 Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~L~~N~l~ 166 (220)
T 2v70_A 88 LTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQIT-TVAPGAFDTLHSLSTLNLLANPFN 166 (220)
T ss_dssp CCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCC-CBCTTTTTTCTTCCEEECCSCCEE
T ss_pred CCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCC-EECHHHhcCCCCCCEEEecCcCCc
Confidence 9999999888888999999999999999999888888888888888888888888 554455677888888888888887
Q ss_pred CCC
Q 005226 204 GPI 206 (707)
Q Consensus 204 ~~~ 206 (707)
...
T Consensus 167 c~c 169 (220)
T 2v70_A 167 CNC 169 (220)
T ss_dssp CSG
T ss_pred CCC
Confidence 543
No 335
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.83 E-value=3.9e-21 Score=205.23 Aligned_cols=176 Identities=26% Similarity=0.281 Sum_probs=149.0
Q ss_pred EEEcCCCCccccCCCCcCCCCCCCEEEcccCCcCCCCCcccc-CCCCCceEEecCccCCCCCCcccCCCCCccEEeccCC
Q 005226 73 GVAISGKNVRGYIPSELGSLIYLRRLNLHNNNLFGSLPDQLF-NATSLHSIFLYGNNLSGSLPPSVCNLPRLQNLDLSNN 151 (707)
Q Consensus 73 ~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 151 (707)
.+++++++|+. +|..+. +.|+.|+|++|+|++..+..|. ++++|++|+|++|+|++..|..|.++++|+.|+|++|
T Consensus 22 ~l~c~~~~l~~-iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 98 (361)
T 2xot_A 22 ILSCSKQQLPN-VPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSN 98 (361)
T ss_dssp EEECCSSCCSS-CCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EEEeCCCCcCc-cCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCC
Confidence 68999999995 566554 4689999999999988888787 9999999999999999877888999999999999999
Q ss_pred cccccCCCCCcccchhhhhhhcCCcccccCCCcccccCCCccEEeccCCCCCCCCCcch---hhhhccccEEEeccCcCc
Q 005226 152 SFSGSLPDGLKNCKQLQRLILARNKFSGQIPAGIWPELENLVQLDLSDNDFKGPIPNDL---GELQSLSATLNLSYNHLS 228 (707)
Q Consensus 152 ~l~~~~p~~~~~l~~L~~L~l~~N~l~~~lp~~~~~~l~~L~~L~ls~N~l~~~~p~~~---~~l~~L~~~L~l~~N~l~ 228 (707)
+|++..+..|.++++|+.|+|++|+|+ .++...|..+++|+.|+|++|+|++..+..| ..+++| +.|+|++|+|+
T Consensus 99 ~l~~~~~~~~~~l~~L~~L~L~~N~i~-~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L-~~L~L~~N~l~ 176 (361)
T 2xot_A 99 HLHTLDEFLFSDLQALEVLLLYNNHIV-VVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKL-MLLDLSSNKLK 176 (361)
T ss_dssp CCCEECTTTTTTCTTCCEEECCSSCCC-EECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTC-CEEECCSSCCC
T ss_pred cCCcCCHHHhCCCcCCCEEECCCCccc-EECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcC-CEEECCCCCCC
Confidence 999777788999999999999999999 6766777899999999999999995443444 578889 79999999999
Q ss_pred CCCCCcCCCCCC--ccEEEccCCcCcc
Q 005226 229 GKIPKSLGNLPV--TVSFDLRGNNLSG 253 (707)
Q Consensus 229 ~~~p~~~~~l~~--L~~l~l~~N~l~~ 253 (707)
+..+..+..++. |+.|+|++|++..
T Consensus 177 ~l~~~~~~~l~~~~l~~l~l~~N~~~C 203 (361)
T 2xot_A 177 KLPLTDLQKLPAWVKNGLYLHNNPLEC 203 (361)
T ss_dssp CCCHHHHHHSCHHHHTTEECCSSCEEC
T ss_pred ccCHHHhhhccHhhcceEEecCCCccC
Confidence 665567777776 4789999998874
No 336
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.83 E-value=1.7e-20 Score=193.86 Aligned_cols=170 Identities=28% Similarity=0.403 Sum_probs=148.9
Q ss_pred CcEEEEEcCCCCccccCCCCcCCCCCCCEEEcccCCcCCCCCccccCCCCCceEEecCccCCCCCCcccCCCCCccEEec
Q 005226 69 PRVVGVAISGKNVRGYIPSELGSLIYLRRLNLHNNNLFGSLPDQLFNATSLHSIFLYGNNLSGSLPPSVCNLPRLQNLDL 148 (707)
Q Consensus 69 ~~v~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 148 (707)
.+++.|++++|.+... +.+..+++|++|+|++|+|++..+ +.++++|++|+|++|+|++ +| .+..+++|+.|+|
T Consensus 46 ~~L~~L~l~~~~i~~~--~~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~L 119 (291)
T 1h6t_A 46 NSIDQIIANNSDIKSV--QGIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLSL 119 (291)
T ss_dssp HTCCEEECTTSCCCCC--TTGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEEC
T ss_pred CcccEEEccCCCcccC--hhHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCEEEC
Confidence 5789999999999866 358999999999999999996554 9999999999999999985 44 4999999999999
Q ss_pred cCCcccccCCCCCcccchhhhhhhcCCcccccCCCcccccCCCccEEeccCCCCCCCCCcchhhhhccccEEEeccCcCc
Q 005226 149 SNNSFSGSLPDGLKNCKQLQRLILARNKFSGQIPAGIWPELENLVQLDLSDNDFKGPIPNDLGELQSLSATLNLSYNHLS 228 (707)
Q Consensus 149 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~lp~~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~L~l~~N~l~ 228 (707)
++|++++. ..+..+++|+.|+|++|+++ .+ ..+..+++|+.|+|++|+|++..| +..+++| +.|+|++|+|+
T Consensus 120 ~~n~i~~~--~~l~~l~~L~~L~l~~n~l~-~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L-~~L~L~~N~i~ 191 (291)
T 1h6t_A 120 EHNGISDI--NGLVHLPQLESLYLGNNKIT-DI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKL-QNLYLSKNHIS 191 (291)
T ss_dssp TTSCCCCC--GGGGGCTTCCEEECCSSCCC-CC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTC-CEEECCSSCCC
T ss_pred CCCcCCCC--hhhcCCCCCCEEEccCCcCC-cc--hhhccCCCCCEEEccCCccccchh--hcCCCcc-CEEECCCCcCC
Confidence 99999853 57889999999999999999 55 346899999999999999996544 9999999 79999999999
Q ss_pred CCCCCcCCCCCCccEEEccCCcCccc
Q 005226 229 GKIPKSLGNLPVTVSFDLRGNNLSGE 254 (707)
Q Consensus 229 ~~~p~~~~~l~~L~~l~l~~N~l~~~ 254 (707)
+ +| .+..+++|+.|++++|+++..
T Consensus 192 ~-l~-~l~~l~~L~~L~l~~n~i~~~ 215 (291)
T 1h6t_A 192 D-LR-ALAGLKNLDVLELFSQECLNK 215 (291)
T ss_dssp B-CG-GGTTCTTCSEEEEEEEEEECC
T ss_pred C-Ch-hhccCCCCCEEECcCCcccCC
Confidence 5 55 489999999999999999853
No 337
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.82 E-value=5.9e-21 Score=200.04 Aligned_cols=202 Identities=23% Similarity=0.219 Sum_probs=151.5
Q ss_pred CcEEEEEcCCCCccccCCCCcCCCCCCCEEEcccCCcCCCCC----------------ccccCCCCCceEEecCccCCCC
Q 005226 69 PRVVGVAISGKNVRGYIPSELGSLIYLRRLNLHNNNLFGSLP----------------DQLFNATSLHSIFLYGNNLSGS 132 (707)
Q Consensus 69 ~~v~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p----------------~~~~~l~~L~~L~L~~N~l~~~ 132 (707)
.+++.|+|++|.+++..+ +..+++|++|+|++|+|++..+ .....+++|++|+|++|+|++.
T Consensus 58 ~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~l~~l~~~~~L~~L~l~~n~l~~~~~~~~~~L~~L~l~~N~l~~~ 135 (317)
T 3o53_A 58 TKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLVGPSIETLHAANNNISRVSCSRGQGKKNIYLANNKITML 135 (317)
T ss_dssp TTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSSEEEEEEECTTCCEEECCSSCCSEEEECCCSSCEEEECCSSCCCSG
T ss_pred CcCCEEECCCCcCCcchh--hhhcCCCCEEECcCCccccccCCCCcCEEECCCCccCCcCccccCCCCEEECCCCCCCCc
Confidence 355666666666655443 5555556555555555543210 0112367899999999999988
Q ss_pred CCcccCCCCCccEEeccCCcccccCCCCCc-ccchhhhhhhcCCcccccCCCcccccCCCccEEeccCCCCCCCCCcchh
Q 005226 133 LPPSVCNLPRLQNLDLSNNSFSGSLPDGLK-NCKQLQRLILARNKFSGQIPAGIWPELENLVQLDLSDNDFKGPIPNDLG 211 (707)
Q Consensus 133 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~l~~N~l~~~lp~~~~~~l~~L~~L~ls~N~l~~~~p~~~~ 211 (707)
.|..+..+++|+.|+|++|++++..|..+. .+++|+.|+|++|+|+ .+|... .+++|++|+|++|+|++ +|..+.
T Consensus 136 ~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~-~~~~~~--~l~~L~~L~Ls~N~l~~-l~~~~~ 211 (317)
T 3o53_A 136 RDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIY-DVKGQV--VFAKLKTLDLSSNKLAF-MGPEFQ 211 (317)
T ss_dssp GGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCC-EEECCC--CCTTCCEEECCSSCCCE-ECGGGG
T ss_pred cchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCc-cccccc--ccccCCEEECCCCcCCc-chhhhc
Confidence 888999999999999999999987777774 7999999999999999 666544 58999999999999995 666799
Q ss_pred hhhccccEEEeccCcCcCCCCCcCCCCCCccEEEccCCcCc-ccCCCC-CCCCCCCCcccCCCCcccCC
Q 005226 212 ELQSLSATLNLSYNHLSGKIPKSLGNLPVTVSFDLRGNNLS-GEIPQT-GSFANQGPTAFLSNPLLCGF 278 (707)
Q Consensus 212 ~l~~L~~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~-~~~p~~-~~~~~~~~~~~~~N~~l~~~ 278 (707)
.+++| +.|+|++|+|+ .+|..+..+++|+.|++++|+++ +.+|.. ..+..+..+...+|+.+.+.
T Consensus 212 ~l~~L-~~L~L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~~~~l~~~ 278 (317)
T 3o53_A 212 SAAGV-TWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQ 278 (317)
T ss_dssp GGTTC-SEEECTTSCCC-EECTTCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHHHHHHHHSS
T ss_pred ccCcc-cEEECcCCccc-chhhHhhcCCCCCEEEccCCCccCcCHHHHHhccccceEEECCCchhccCC
Confidence 99999 79999999999 68999999999999999999999 544421 12223333444444444443
No 338
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.82 E-value=5.8e-21 Score=199.48 Aligned_cols=202 Identities=18% Similarity=0.141 Sum_probs=164.5
Q ss_pred CcEEEEEcCCCCccccCC---CCcCCCCCCCEEEcccCCcCCCCCccc--cCCCCCceEEecCccCCCCCC----cccCC
Q 005226 69 PRVVGVAISGKNVRGYIP---SELGSLIYLRRLNLHNNNLFGSLPDQL--FNATSLHSIFLYGNNLSGSLP----PSVCN 139 (707)
Q Consensus 69 ~~v~~L~L~~n~l~~~~~---~~l~~l~~L~~L~L~~N~l~~~~p~~~--~~l~~L~~L~L~~N~l~~~~p----~~~~~ 139 (707)
.+++.|.+.++.+....- ..+..+++|++|+|++|.+++..|..+ .++++|++|+|++|++++..| ..+..
T Consensus 64 ~~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~ 143 (310)
T 4glp_A 64 LRVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWL 143 (310)
T ss_dssp CCCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTB
T ss_pred cceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhh
Confidence 356778888877653211 112245679999999999999999998 899999999999999997666 44568
Q ss_pred CCCccEEeccCCcccccCCCCCcccchhhhhhhcCCccccc--CC-CcccccCCCccEEeccCCCCCCCCCc----chhh
Q 005226 140 LPRLQNLDLSNNSFSGSLPDGLKNCKQLQRLILARNKFSGQ--IP-AGIWPELENLVQLDLSDNDFKGPIPN----DLGE 212 (707)
Q Consensus 140 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~--lp-~~~~~~l~~L~~L~ls~N~l~~~~p~----~~~~ 212 (707)
+++|++|+|++|++++..|..|.++++|++|+|++|++.+. ++ ...+..+++|++|+|++|+|+ .++. .+.+
T Consensus 144 ~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~~ 222 (310)
T 4glp_A 144 KPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGME-TPTGVCAALAAA 222 (310)
T ss_dssp CSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCC-CHHHHHHHHHHH
T ss_pred ccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCC-chHHHHHHHHhc
Confidence 99999999999999988889999999999999999998742 33 333468999999999999997 4444 2577
Q ss_pred hhccccEEEeccCcCcCCCCCcCCCC---CCccEEEccCCcCcccCCCCCCCCCCCCcccCCCCc
Q 005226 213 LQSLSATLNLSYNHLSGKIPKSLGNL---PVTVSFDLRGNNLSGEIPQTGSFANQGPTAFLSNPL 274 (707)
Q Consensus 213 l~~L~~~L~l~~N~l~~~~p~~~~~l---~~L~~l~l~~N~l~~~~p~~~~~~~~~~~~~~~N~~ 274 (707)
+++| ++|+|++|+|++..|..+..+ ++|+.|++++|+|+ .+|... ..++..+.+.+|..
T Consensus 223 l~~L-~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~-~~~L~~L~Ls~N~l 284 (310)
T 4glp_A 223 GVQP-HSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGL-PAKLRVLDLSSNRL 284 (310)
T ss_dssp TCCC-SSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCC-CSCCSCEECCSCCC
T ss_pred CCCC-CEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhh-cCCCCEEECCCCcC
Confidence 8999 799999999998889888877 69999999999999 555432 36788888877753
No 339
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.82 E-value=1.6e-20 Score=199.36 Aligned_cols=192 Identities=20% Similarity=0.309 Sum_probs=93.8
Q ss_pred CcEEEEEcCCCCccccCCCCcCCCCCCCEEEcccCCcCCCCCccccCCCCCceEEecCccCCCCCCcccCCCCCccEEec
Q 005226 69 PRVVGVAISGKNVRGYIPSELGSLIYLRRLNLHNNNLFGSLPDQLFNATSLHSIFLYGNNLSGSLPPSVCNLPRLQNLDL 148 (707)
Q Consensus 69 ~~v~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 148 (707)
++++.|++++|.....++ .+..+++|++|++++|.+++..+ +..+++|++|+|++|++++ ++. +..+++|+.|++
T Consensus 132 ~~L~~L~l~~n~~~~~~~-~~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~-~~~-~~~l~~L~~L~l 206 (347)
T 4fmz_A 132 TKMYSLNLGANHNLSDLS-PLSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIED-ISP-LASLTSLHYFTA 206 (347)
T ss_dssp TTCCEEECTTCTTCCCCG-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCCCC-CGG-GGGCTTCCEEEC
T ss_pred CceeEEECCCCCCccccc-chhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCcccc-ccc-ccCCCccceeec
Confidence 456666666664443332 25666666666666666653322 5556666666666666552 222 444445555555
Q ss_pred cCCcccccCCCCCcccchhhhhhhcCCcccccCCC--------------------cccccCCCccEEeccCCCCCCCCCc
Q 005226 149 SNNSFSGSLPDGLKNCKQLQRLILARNKFSGQIPA--------------------GIWPELENLVQLDLSDNDFKGPIPN 208 (707)
Q Consensus 149 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~lp~--------------------~~~~~l~~L~~L~ls~N~l~~~~p~ 208 (707)
++|.+++..+ +..+++|+.|+|++|+++ .++. ..+..+++|++|++++|++++. .
T Consensus 207 ~~n~l~~~~~--~~~~~~L~~L~l~~n~l~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l~~n~l~~~--~ 281 (347)
T 4fmz_A 207 YVNQITDITP--VANMTRLNSLKIGNNKIT-DLSPLANLSQLTWLEIGTNQISDINAVKDLTKLKMLNVGSNQISDI--S 281 (347)
T ss_dssp CSSCCCCCGG--GGGCTTCCEEECCSSCCC-CCGGGTTCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCCC--G
T ss_pred ccCCCCCCch--hhcCCcCCEEEccCCccC-CCcchhcCCCCCEEECCCCccCCChhHhcCCCcCEEEccCCccCCC--h
Confidence 5554443222 444444444444444444 3332 1134445555555555555432 2
Q ss_pred chhhhhccccEEEeccCcCcCCCCCcCCCCCCccEEEccCCcCcccCCCCCCCCCCCCcccCCC
Q 005226 209 DLGELQSLSATLNLSYNHLSGKIPKSLGNLPVTVSFDLRGNNLSGEIPQTGSFANQGPTAFLSN 272 (707)
Q Consensus 209 ~~~~l~~L~~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~~~~~~~~~~~~N 272 (707)
.+..+++| +.|++++|++++..|..+..+++|+.|++++|++++.+| ...+.++..+.+.+|
T Consensus 282 ~~~~l~~L-~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~-~~~l~~L~~L~l~~N 343 (347)
T 4fmz_A 282 VLNNLSQL-NSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP-LASLSKMDSADFANQ 343 (347)
T ss_dssp GGGGCTTC-SEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG-GGGCTTCSEESSSCC
T ss_pred hhcCCCCC-CEEECcCCcCCCcChhHhhccccCCEEEccCCccccccC-hhhhhccceeehhhh
Confidence 34444555 455555555554444444555555555555555554443 333444444444444
No 340
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.82 E-value=3.6e-20 Score=204.88 Aligned_cols=191 Identities=26% Similarity=0.307 Sum_probs=93.0
Q ss_pred CcEEEEEcCCCCccccCCCCcCCCCCCCEEEcccCCcCCCCC--------------------ccccCCCCCceEEecCcc
Q 005226 69 PRVVGVAISGKNVRGYIPSELGSLIYLRRLNLHNNNLFGSLP--------------------DQLFNATSLHSIFLYGNN 128 (707)
Q Consensus 69 ~~v~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p--------------------~~~~~l~~L~~L~L~~N~ 128 (707)
.+++.|+|++|.+.+. ..+..+++|++|+|++|.+++..| ..+..+++|++|+|++|+
T Consensus 177 ~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~l~~n~ 254 (466)
T 1o6v_A 177 TTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 254 (466)
T ss_dssp TTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGGGGGCTTCCEEECCSSCCCCCGGGGGCTTCSEEECCSSC
T ss_pred CCCCEEECcCCcCCCC--hhhccCCCCCEEEecCCcccccccccccCCCCEEECCCCCcccchhhhcCCCCCEEECCCCc
Confidence 3455555555555543 235555555555555555554333 234444444444444444
Q ss_pred CCCCCCcccCCCCCccEEeccCCcccccCCCCCcccchhhhhhhcCCcccccCCCcccccCCCccEEeccCCCCCCCCCc
Q 005226 129 LSGSLPPSVCNLPRLQNLDLSNNSFSGSLPDGLKNCKQLQRLILARNKFSGQIPAGIWPELENLVQLDLSDNDFKGPIPN 208 (707)
Q Consensus 129 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~lp~~~~~~l~~L~~L~ls~N~l~~~~p~ 208 (707)
+++..| +..+++|+.|+|++|++++..+ +..+++|+.|+|++|+++ .++. +..+++|+.|+|++|++++..|
T Consensus 255 l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~-~~~~--~~~l~~L~~L~L~~n~l~~~~~- 326 (466)
T 1o6v_A 255 ISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLE-DISP--ISNLKNLTYLTLYFNNISDISP- 326 (466)
T ss_dssp CCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCS-CCGG--GGGCTTCSEEECCSSCCSCCGG-
T ss_pred cccchh--hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCccc-Cchh--hcCCCCCCEEECcCCcCCCchh-
Confidence 443222 4444555555555555543222 444555555555555554 2322 3445555555555555554333
Q ss_pred chhhhhccccEEEeccCcCcCCCCCcCCCCCCccEEEccCCcCcccCCCCCCCCCCCCcccCCCCc
Q 005226 209 DLGELQSLSATLNLSYNHLSGKIPKSLGNLPVTVSFDLRGNNLSGEIPQTGSFANQGPTAFLSNPL 274 (707)
Q Consensus 209 ~~~~l~~L~~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~~~~~~~~~~~~N~~ 274 (707)
+..+++| +.|++++|++++. ..+..+++|+.|++++|++++.+| ...+.++..+.+.+|++
T Consensus 327 -~~~l~~L-~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~l~~n~~ 387 (466)
T 1o6v_A 327 -VSSLTKL-QRLFFYNNKVSDV--SSLANLTNINWLSAGHNQISDLTP-LANLTRITQLGLNDQAW 387 (466)
T ss_dssp -GGGCTTC-CEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCBCGG-GTTCTTCCEEECCCEEE
T ss_pred -hccCccC-CEeECCCCccCCc--hhhccCCCCCEEeCCCCccCccch-hhcCCCCCEEeccCCcc
Confidence 4455555 4555555555532 244555555555555555555544 34444444444444443
No 341
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.81 E-value=2.7e-20 Score=213.87 Aligned_cols=209 Identities=21% Similarity=0.221 Sum_probs=173.1
Q ss_pred CcEEEEEcCCCCccc--cCCCCcCCCCCCCEEEcccCCcCCCCCccccCCCCCceEEecCccCCCCCC-cccCCCCCccE
Q 005226 69 PRVVGVAISGKNVRG--YIPSELGSLIYLRRLNLHNNNLFGSLPDQLFNATSLHSIFLYGNNLSGSLP-PSVCNLPRLQN 145 (707)
Q Consensus 69 ~~v~~L~L~~n~l~~--~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~ 145 (707)
++++.|++++|.+.. ..+..+..+.+|+.|+++.|.+. ..+..+..+++|+.+++++|++....+ ..|..+++|+.
T Consensus 371 ~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~-~~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~ 449 (635)
T 4g8a_A 371 PSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIY 449 (635)
T ss_dssp TTCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEE-EECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCE
T ss_pred cccccchhhccccccccccccchhhhhhhhhhhccccccc-cccccccccccccchhhhhcccccccccccccccccccc
Confidence 456666666666543 33445556666777777776666 345567788899999998887775554 46889999999
Q ss_pred EeccCCcccccCCCCCcccchhhhhhhcCCcccccCCCcccccCCCccEEeccCCCCCCCCCcchhhhhccccEEEeccC
Q 005226 146 LDLSNNSFSGSLPDGLKNCKQLQRLILARNKFSGQIPAGIWPELENLVQLDLSDNDFKGPIPNDLGELQSLSATLNLSYN 225 (707)
Q Consensus 146 L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~lp~~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~L~l~~N 225 (707)
+++++|.+.+..|..+..+++|+.|+|++|++.+.+++..|..+++|++|+|++|+|++..|..|.++++| ++|+|++|
T Consensus 450 l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L-~~L~Ls~N 528 (635)
T 4g8a_A 450 LDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSL-QVLNMSHN 528 (635)
T ss_dssp EECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTC-CEEECTTS
T ss_pred ccccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCC-CEEECCCC
Confidence 99999999999999999999999999999987656666677899999999999999999999999999999 89999999
Q ss_pred cCcCCCCCcCCCCCCccEEEccCCcCcccCCCCC-CC-CCCCCcccCCCCcccCCC
Q 005226 226 HLSGKIPKSLGNLPVTVSFDLRGNNLSGEIPQTG-SF-ANQGPTAFLSNPLLCGFP 279 (707)
Q Consensus 226 ~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~-~~-~~~~~~~~~~N~~l~~~~ 279 (707)
+|++..|..|..+++|+.|++++|+|++.+|... .+ .++..+.+.+|||.|.|.
T Consensus 529 ~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C~ 584 (635)
T 4g8a_A 529 NFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCE 584 (635)
T ss_dssp CCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCSGG
T ss_pred cCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcccCC
Confidence 9999889999999999999999999999988543 23 467788999999999864
No 342
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.80 E-value=2.9e-19 Score=196.54 Aligned_cols=181 Identities=20% Similarity=0.185 Sum_probs=103.1
Q ss_pred CcEEEEEcCCCCccccCCCCcCCCCCCCEEEcccCCcCCCCCccccCCCCCceEEecCccCCCCCCcccCCCCCccEEec
Q 005226 69 PRVVGVAISGKNVRGYIPSELGSLIYLRRLNLHNNNLFGSLPDQLFNATSLHSIFLYGNNLSGSLPPSVCNLPRLQNLDL 148 (707)
Q Consensus 69 ~~v~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 148 (707)
.+++.|+|++|++++. | ++.+++|++|+|++|+|++. | +.++++|++|+|++|+|++ +| ++.+++|+.|++
T Consensus 64 ~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~L~~L~L~~N~l~~-l~--~~~l~~L~~L~l 134 (457)
T 3bz5_A 64 TGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D--VTPLTKLTYLNCDTNKLTK-LD--VSQNPLLTYLNC 134 (457)
T ss_dssp TTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C--CTTCTTCCEEECCSSCCSC-CC--CTTCTTCCEEEC
T ss_pred CCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e--cCCCCcCCEEECCCCcCCe-ec--CCCCCcCCEEEC
Confidence 3555555555555543 2 55555555555555555543 2 5555555555555555553 23 555555555555
Q ss_pred cCCcccccCCCCCcccchhhhhhhcCCcccccCCCcccccCCCccEEeccCCCCCCCCCcchhhhhccccEEEeccCcCc
Q 005226 149 SNNSFSGSLPDGLKNCKQLQRLILARNKFSGQIPAGIWPELENLVQLDLSDNDFKGPIPNDLGELQSLSATLNLSYNHLS 228 (707)
Q Consensus 149 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~lp~~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~L~l~~N~l~ 228 (707)
++|+|++ ++ +.++++|+.|++++|+..+.++ +..+++|++|++++|+|++ +| +..+++| +.|++++|+++
T Consensus 135 ~~N~l~~-l~--l~~l~~L~~L~l~~n~~~~~~~---~~~l~~L~~L~ls~n~l~~-l~--l~~l~~L-~~L~l~~N~l~ 204 (457)
T 3bz5_A 135 ARNTLTE-ID--VSHNTQLTELDCHLNKKITKLD---VTPQTQLTTLDCSFNKITE-LD--VSQNKLL-NRLNCDTNNIT 204 (457)
T ss_dssp TTSCCSC-CC--CTTCTTCCEEECTTCSCCCCCC---CTTCTTCCEEECCSSCCCC-CC--CTTCTTC-CEEECCSSCCS
T ss_pred CCCccce-ec--cccCCcCCEEECCCCCcccccc---cccCCcCCEEECCCCccce-ec--cccCCCC-CEEECcCCcCC
Confidence 5555554 22 5555556666666654433442 3456666666666666664 33 5666666 56666666666
Q ss_pred CCCCCcCCCCCCccEEEccCCcCcccCCCCCCCCCCCCcccCCCC
Q 005226 229 GKIPKSLGNLPVTVSFDLRGNNLSGEIPQTGSFANQGPTAFLSNP 273 (707)
Q Consensus 229 ~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~~~~~~~~~~~~N~ 273 (707)
+. .+..+++|+.|++++|++++ +| ...+.++..+.+.+|.
T Consensus 205 ~~---~l~~l~~L~~L~Ls~N~l~~-ip-~~~l~~L~~L~l~~N~ 244 (457)
T 3bz5_A 205 KL---DLNQNIQLTFLDCSSNKLTE-ID-VTPLTQLTYFDCSVNP 244 (457)
T ss_dssp CC---CCTTCTTCSEEECCSSCCSC-CC-CTTCTTCSEEECCSSC
T ss_pred ee---ccccCCCCCEEECcCCcccc-cC-ccccCCCCEEEeeCCc
Confidence 43 26666667777777777766 34 4455555555555553
No 343
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.80 E-value=2.8e-19 Score=196.67 Aligned_cols=177 Identities=21% Similarity=0.178 Sum_probs=154.5
Q ss_pred CcEEEEEcCCCCccccCCCCcCCCCCCCEEEcccCCcCCCCCccccCCCCCceEEecCccCCCCCCcccCCCCCccEEec
Q 005226 69 PRVVGVAISGKNVRGYIPSELGSLIYLRRLNLHNNNLFGSLPDQLFNATSLHSIFLYGNNLSGSLPPSVCNLPRLQNLDL 148 (707)
Q Consensus 69 ~~v~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 148 (707)
.+++.|+|++|++++. + ++++++|++|+|++|+|++ +| +.++++|++|+|++|+|++. + ++.+++|+.|++
T Consensus 85 ~~L~~L~Ls~N~l~~~-~--~~~l~~L~~L~L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~l-~--l~~l~~L~~L~l 155 (457)
T 3bz5_A 85 TNLTYLACDSNKLTNL-D--VTPLTKLTYLNCDTNKLTK-LD--VSQNPLLTYLNCARNTLTEI-D--VSHNTQLTELDC 155 (457)
T ss_dssp TTCSEEECCSSCCSCC-C--CTTCTTCCEEECCSSCCSC-CC--CTTCTTCCEEECTTSCCSCC-C--CTTCTTCCEEEC
T ss_pred CCCCEEECcCCCCcee-e--cCCCCcCCEEECCCCcCCe-ec--CCCCCcCCEEECCCCcccee-c--cccCCcCCEEEC
Confidence 6899999999999986 3 9999999999999999997 44 89999999999999999964 3 889999999999
Q ss_pred cCCcccccCCCCCcccchhhhhhhcCCcccccCCCcccccCCCccEEeccCCCCCCCCCcchhhhhccccEEEeccCcCc
Q 005226 149 SNNSFSGSLPDGLKNCKQLQRLILARNKFSGQIPAGIWPELENLVQLDLSDNDFKGPIPNDLGELQSLSATLNLSYNHLS 228 (707)
Q Consensus 149 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~lp~~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~L~l~~N~l~ 228 (707)
++|+..+.+ .+..+++|+.|++++|+|+ .+| +..+++|+.|++++|+|++. .+..+++| +.|++++|+|+
T Consensus 156 ~~n~~~~~~--~~~~l~~L~~L~ls~n~l~-~l~---l~~l~~L~~L~l~~N~l~~~---~l~~l~~L-~~L~Ls~N~l~ 225 (457)
T 3bz5_A 156 HLNKKITKL--DVTPQTQLTTLDCSFNKIT-ELD---VSQNKLLNRLNCDTNNITKL---DLNQNIQL-TFLDCSSNKLT 225 (457)
T ss_dssp TTCSCCCCC--CCTTCTTCCEEECCSSCCC-CCC---CTTCTTCCEEECCSSCCSCC---CCTTCTTC-SEEECCSSCCS
T ss_pred CCCCccccc--ccccCCcCCEEECCCCccc-eec---cccCCCCCEEECcCCcCCee---ccccCCCC-CEEECcCCccc
Confidence 999766666 5889999999999999999 577 57899999999999999965 48899999 79999999999
Q ss_pred CCCCCcCCCCCCccEEEccCCcCcccCCCCCCCCCCCCccc
Q 005226 229 GKIPKSLGNLPVTVSFDLRGNNLSGEIPQTGSFANQGPTAF 269 (707)
Q Consensus 229 ~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~~~~~~~~~~ 269 (707)
+ +| +..+++|+.|++++|++++.++ ..+.++..+..
T Consensus 226 ~-ip--~~~l~~L~~L~l~~N~l~~~~~--~~l~~L~~L~l 261 (457)
T 3bz5_A 226 E-ID--VTPLTQLTYFDCSVNPLTELDV--STLSKLTTLHC 261 (457)
T ss_dssp C-CC--CTTCTTCSEEECCSSCCSCCCC--TTCTTCCEEEC
T ss_pred c-cC--ccccCCCCEEEeeCCcCCCcCH--HHCCCCCEEec
Confidence 7 67 8899999999999999998765 44555544433
No 344
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.80 E-value=1.3e-19 Score=203.05 Aligned_cols=163 Identities=26% Similarity=0.365 Sum_probs=142.4
Q ss_pred CCcEEEEEcCCCCccccCCCCcCCCCCCCEEEcccCCcCCCCCccccCCCCCceEEecCccCCCCCCcccCCCCCccEEe
Q 005226 68 DPRVVGVAISGKNVRGYIPSELGSLIYLRRLNLHNNNLFGSLPDQLFNATSLHSIFLYGNNLSGSLPPSVCNLPRLQNLD 147 (707)
Q Consensus 68 ~~~v~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 147 (707)
.++++.|+|++|+|+ .+| ..+++|++|+|++|+|++ +|. +.+ +|++|+|++|+|++ +|. .+++|+.|+
T Consensus 79 ~~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~ 146 (571)
T 3cvr_A 79 PPQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYIN 146 (571)
T ss_dssp CTTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEE
T ss_pred cCCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEe
Confidence 368999999999999 566 568999999999999997 777 665 99999999999996 776 689999999
Q ss_pred ccCCcccccCCCCCcccchhhhhhhcCCcccccCCCcccccCCCccEEeccCCCCCCCCCcchhhhhcc------ccEEE
Q 005226 148 LSNNSFSGSLPDGLKNCKQLQRLILARNKFSGQIPAGIWPELENLVQLDLSDNDFKGPIPNDLGELQSL------SATLN 221 (707)
Q Consensus 148 Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~lp~~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L------~~~L~ 221 (707)
|++|+|++ +|. .+++|+.|+|++|+|+ .+|. |. ++|+.|+|++|+|+ .+|. |.. +| ++.|+
T Consensus 147 Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~-~lp~--l~--~~L~~L~Ls~N~L~-~lp~-~~~--~L~~~~~~L~~L~ 213 (571)
T 3cvr_A 147 ADNNQLTM-LPE---LPTSLEVLSVRNNQLT-FLPE--LP--ESLEALDVSTNLLE-SLPA-VPV--RNHHSEETEIFFR 213 (571)
T ss_dssp CCSSCCSC-CCC---CCTTCCEEECCSSCCS-CCCC--CC--TTCCEEECCSSCCS-SCCC-CC----------CCEEEE
T ss_pred CCCCccCc-CCC---cCCCcCEEECCCCCCC-Ccch--hh--CCCCEEECcCCCCC-chhh-HHH--hhhcccccceEEe
Confidence 99999995 776 6789999999999999 5988 44 99999999999999 6776 554 33 15999
Q ss_pred eccCcCcCCCCCcCCCCCCccEEEccCCcCcccCC
Q 005226 222 LSYNHLSGKIPKSLGNLPVTVSFDLRGNNLSGEIP 256 (707)
Q Consensus 222 l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p 256 (707)
|++|+|+ .+|..+..+++|+.|+|++|+|++.+|
T Consensus 214 Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p 247 (571)
T 3cvr_A 214 CRENRIT-HIPENILSLDPTCTIILEDNPLSSRIR 247 (571)
T ss_dssp CCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHH
T ss_pred cCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCH
Confidence 9999999 689988899999999999999999887
No 345
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.80 E-value=1.3e-19 Score=205.32 Aligned_cols=172 Identities=28% Similarity=0.399 Sum_probs=152.6
Q ss_pred CcEEEEEcCCCCccccCCCCcCCCCCCCEEEcccCCcCCCCCccccCCCCCceEEecCccCCCCCCcccCCCCCccEEec
Q 005226 69 PRVVGVAISGKNVRGYIPSELGSLIYLRRLNLHNNNLFGSLPDQLFNATSLHSIFLYGNNLSGSLPPSVCNLPRLQNLDL 148 (707)
Q Consensus 69 ~~v~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 148 (707)
.+++.|+|++|.|... + .|..|++|+.|+|++|+|++..| +..+++|+.|+|++|+|++ +| .+..+++|+.|+|
T Consensus 43 ~~L~~L~l~~n~i~~l-~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~L 116 (605)
T 1m9s_A 43 NSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-LS-SLKDLKKLKSLSL 116 (605)
T ss_dssp TTCCCCBCTTCCCCCC-T-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC-CT-TSTTCTTCCEEEC
T ss_pred CCCCEEECcCCCCCCC-h-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC-Ch-hhccCCCCCEEEe
Confidence 5788999999999865 3 69999999999999999997655 9999999999999999994 44 7999999999999
Q ss_pred cCCcccccCCCCCcccchhhhhhhcCCcccccCCCcccccCCCccEEeccCCCCCCCCCcchhhhhccccEEEeccCcCc
Q 005226 149 SNNSFSGSLPDGLKNCKQLQRLILARNKFSGQIPAGIWPELENLVQLDLSDNDFKGPIPNDLGELQSLSATLNLSYNHLS 228 (707)
Q Consensus 149 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~lp~~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~L~l~~N~l~ 228 (707)
++|+|++ + ..+..|++|+.|+|++|+|+ .+ ..+..+++|+.|+|++|+|++..| +..+++| +.|+|++|+|+
T Consensus 117 s~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~-~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L-~~L~Ls~N~i~ 188 (605)
T 1m9s_A 117 EHNGISD-I-NGLVHLPQLESLYLGNNKIT-DI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKL-QNLYLSKNHIS 188 (605)
T ss_dssp TTSCCCC-C-GGGGGCTTCSEEECCSSCCC-CC--GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTC-CEEECCSSCCC
T ss_pred cCCCCCC-C-ccccCCCccCEEECCCCccC-Cc--hhhcccCCCCEEECcCCcCCCchh--hccCCCC-CEEECcCCCCC
Confidence 9999995 3 46999999999999999999 55 346899999999999999997666 9999999 79999999999
Q ss_pred CCCCCcCCCCCCccEEEccCCcCcccCC
Q 005226 229 GKIPKSLGNLPVTVSFDLRGNNLSGEIP 256 (707)
Q Consensus 229 ~~~p~~~~~l~~L~~l~l~~N~l~~~~p 256 (707)
+ +| .+..+++|+.|+|++|++++.+.
T Consensus 189 ~-l~-~l~~l~~L~~L~L~~N~l~~~p~ 214 (605)
T 1m9s_A 189 D-LR-ALAGLKNLDVLELFSQECLNKPI 214 (605)
T ss_dssp B-CG-GGTTCTTCSEEECCSEEEECCCC
T ss_pred C-Ch-HHccCCCCCEEEccCCcCcCCcc
Confidence 6 44 68999999999999999987543
No 346
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.79 E-value=1.8e-19 Score=204.42 Aligned_cols=180 Identities=26% Similarity=0.305 Sum_probs=98.3
Q ss_pred CCcEEEEEcCCCCccccCCCCcCCCCCCCEEEcccCCcCCCCCccccCCCCCceEEecCccCCCCCCcccCCCCCccEEe
Q 005226 68 DPRVVGVAISGKNVRGYIPSELGSLIYLRRLNLHNNNLFGSLPDQLFNATSLHSIFLYGNNLSGSLPPSVCNLPRLQNLD 147 (707)
Q Consensus 68 ~~~v~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 147 (707)
+++++.|+|++|+|+. +|. .+++|++|+|++|+|+ .+|. .+++|++|+|++|+|++ +|. .+++|+.|+
T Consensus 60 ~~~L~~L~L~~N~l~~-lp~---~l~~L~~L~Ls~N~l~-~lp~---~l~~L~~L~Ls~N~l~~-l~~---~l~~L~~L~ 127 (622)
T 3g06_A 60 PAHITTLVIPDNNLTS-LPA---LPPELRTLEVSGNQLT-SLPV---LPPGLLELSIFSNPLTH-LPA---LPSGLCKLW 127 (622)
T ss_dssp CTTCSEEEECSCCCSC-CCC---CCTTCCEEEECSCCCS-CCCC---CCTTCCEEEECSCCCCC-CCC---CCTTCCEEE
T ss_pred CCCCcEEEecCCCCCC-CCC---cCCCCCEEEcCCCcCC-cCCC---CCCCCCEEECcCCcCCC-CCC---CCCCcCEEE
Confidence 3678888888888874 444 5677888888888877 3554 56677777777777763 333 233444444
Q ss_pred ccCCcccccCCCCCcccchhhhhhhcCCcccccCCCcc--c--------------ccCCCccEEeccCCCCCCCCCcchh
Q 005226 148 LSNNSFSGSLPDGLKNCKQLQRLILARNKFSGQIPAGI--W--------------PELENLVQLDLSDNDFKGPIPNDLG 211 (707)
Q Consensus 148 Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~lp~~~--~--------------~~l~~L~~L~ls~N~l~~~~p~~~~ 211 (707)
|++|+|+ .+|.. +++|++|+|++|+|+ .+|... + ..+++|+.|+|++|+|++ +|..+.
T Consensus 128 L~~N~l~-~lp~~---l~~L~~L~Ls~N~l~-~l~~~~~~L~~L~L~~N~l~~l~~~~~~L~~L~Ls~N~l~~-l~~~~~ 201 (622)
T 3g06_A 128 IFGNQLT-SLPVL---PPGLQELSVSDNQLA-SLPALPSELCKLWAYNNQLTSLPMLPSGLQELSVSDNQLAS-LPTLPS 201 (622)
T ss_dssp CCSSCCS-CCCCC---CTTCCEEECCSSCCS-CCCCCCTTCCEEECCSSCCSCCCCCCTTCCEEECCSSCCSC-CCCCCT
T ss_pred CCCCCCC-cCCCC---CCCCCEEECcCCcCC-CcCCccCCCCEEECCCCCCCCCcccCCCCcEEECCCCCCCC-CCCccc
Confidence 4444444 23322 133344444444433 222110 0 112445555555555542 222221
Q ss_pred h-----------------hhccccEEEeccCcCcCCCCCcCCCCCCccEEEccCCcCcccCCCCCCCCCCCCcccCCCC
Q 005226 212 E-----------------LQSLSATLNLSYNHLSGKIPKSLGNLPVTVSFDLRGNNLSGEIPQTGSFANQGPTAFLSNP 273 (707)
Q Consensus 212 ~-----------------l~~L~~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~~~~~~~~~~~~N~ 273 (707)
+ +++| +.|+|++|+|++ +| ..+++|+.|++++|+|+. +|. .+.++..+.+.+|.
T Consensus 202 ~L~~L~L~~N~l~~l~~~~~~L-~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~~-lp~--~~~~L~~L~Ls~N~ 272 (622)
T 3g06_A 202 ELYKLWAYNNRLTSLPALPSGL-KELIVSGNRLTS-LP---VLPSELKELMVSGNRLTS-LPM--LPSGLLSLSVYRNQ 272 (622)
T ss_dssp TCCEEECCSSCCSSCCCCCTTC-CEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSC-CCC--CCTTCCEEECCSSC
T ss_pred hhhEEECcCCcccccCCCCCCC-CEEEccCCccCc-CC---CCCCcCcEEECCCCCCCc-CCc--ccccCcEEeCCCCC
Confidence 1 1455 677777777774 55 345677777777777774 442 44556666666664
No 347
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.79 E-value=2.2e-19 Score=198.67 Aligned_cols=188 Identities=27% Similarity=0.362 Sum_probs=154.6
Q ss_pred CcEEEEEcCCCCccccCCCCcCCCCCCCEEEcccCCcCCCCCccccCCCCCceEEecCccCCCCCCcccCCCCCccEEec
Q 005226 69 PRVVGVAISGKNVRGYIPSELGSLIYLRRLNLHNNNLFGSLPDQLFNATSLHSIFLYGNNLSGSLPPSVCNLPRLQNLDL 148 (707)
Q Consensus 69 ~~v~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 148 (707)
.+++.|+++ |++.+.. .+.++++|++|+|++|.+++. + .+.++++|++|+|++|++++..| ++.+++|+.|+|
T Consensus 156 ~~L~~L~l~-~~~~~~~--~~~~l~~L~~L~l~~n~l~~~-~-~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l 228 (466)
T 1o6v_A 156 TSLQQLSFG-NQVTDLK--PLANLTTLERLDISSNKVSDI-S-VLAKLTNLESLIATNNQISDITP--LGILTNLDELSL 228 (466)
T ss_dssp TTCSEEEEE-ESCCCCG--GGTTCTTCCEEECCSSCCCCC-G-GGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEEC
T ss_pred CcccEeecC-CcccCch--hhccCCCCCEEECcCCcCCCC-h-hhccCCCCCEEEecCCccccccc--ccccCCCCEEEC
Confidence 678899996 5666543 399999999999999999854 3 58999999999999999996655 778999999999
Q ss_pred cCCcccccCCCCCcccchhhhhhhcCCcccccCCCcccccCCCccEEeccCCCCCCCCCcchhhhhccccEEEeccCcCc
Q 005226 149 SNNSFSGSLPDGLKNCKQLQRLILARNKFSGQIPAGIWPELENLVQLDLSDNDFKGPIPNDLGELQSLSATLNLSYNHLS 228 (707)
Q Consensus 149 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~lp~~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~L~l~~N~l~ 228 (707)
++|++++ + ..+..+++|+.|++++|+++ .++. +..+++|+.|++++|++++..+ +..+++| +.|+|++|+++
T Consensus 229 ~~n~l~~-~-~~l~~l~~L~~L~l~~n~l~-~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L-~~L~L~~n~l~ 300 (466)
T 1o6v_A 229 NGNQLKD-I-GTLASLTNLTDLDLANNQIS-NLAP--LSGLTKLTELKLGANQISNISP--LAGLTAL-TNLELNENQLE 300 (466)
T ss_dssp CSSCCCC-C-GGGGGCTTCSEEECCSSCCC-CCGG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTC-SEEECCSSCCS
T ss_pred CCCCccc-c-hhhhcCCCCCEEECCCCccc-cchh--hhcCCCCCEEECCCCccCcccc--ccCCCcc-CeEEcCCCccc
Confidence 9999985 3 46888999999999999998 4444 5788999999999999986443 8888888 79999999998
Q ss_pred CCCCCcCCCCCCccEEEccCCcCcccCCCCCCCCCCCCcccCCCCc
Q 005226 229 GKIPKSLGNLPVTVSFDLRGNNLSGEIPQTGSFANQGPTAFLSNPL 274 (707)
Q Consensus 229 ~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~~~~~~~~~~~~N~~ 274 (707)
+..| +..+++|+.|++++|++++..| ...+.++..+.+.+|+.
T Consensus 301 ~~~~--~~~l~~L~~L~L~~n~l~~~~~-~~~l~~L~~L~l~~n~l 343 (466)
T 1o6v_A 301 DISP--ISNLKNLTYLTLYFNNISDISP-VSSLTKLQRLFFYNNKV 343 (466)
T ss_dssp CCGG--GGGCTTCSEEECCSSCCSCCGG-GGGCTTCCEEECCSSCC
T ss_pred Cchh--hcCCCCCCEEECcCCcCCCchh-hccCccCCEeECCCCcc
Confidence 6554 7788999999999999988766 45667777777777753
No 348
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.79 E-value=1.1e-19 Score=184.89 Aligned_cols=169 Identities=25% Similarity=0.317 Sum_probs=146.8
Q ss_pred cEEEEEcCCCCccccCCCCcCCCCCCCEEEcccCCcCCCCCccccCCCCCceEEecCccCCCCCCcccCCCCCccEEecc
Q 005226 70 RVVGVAISGKNVRGYIPSELGSLIYLRRLNLHNNNLFGSLPDQLFNATSLHSIFLYGNNLSGSLPPSVCNLPRLQNLDLS 149 (707)
Q Consensus 70 ~v~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 149 (707)
+++.++|++|.+++.. .+..+++|++|+|++|+|+ .+| .+..+++|++|+|++|+|++. |. +..+++|+.|+|+
T Consensus 20 ~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~-~~-l~~l~~L~~L~L~ 93 (263)
T 1xeu_A 20 NAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDL-SP-LKDLTKLEELSVN 93 (263)
T ss_dssp HHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCC-GG-GTTCSSCCEEECC
T ss_pred HHHHHHhcCCCccccc--chhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCC-hh-hccCCCCCEEECC
Confidence 4667788999998664 6889999999999999998 456 789999999999999999954 44 9999999999999
Q ss_pred CCcccccCCCCCcccchhhhhhhcCCcccccCCCcccccCCCccEEeccCCCCCCCCCcchhhhhccccEEEeccCcCcC
Q 005226 150 NNSFSGSLPDGLKNCKQLQRLILARNKFSGQIPAGIWPELENLVQLDLSDNDFKGPIPNDLGELQSLSATLNLSYNHLSG 229 (707)
Q Consensus 150 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~lp~~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~L~l~~N~l~~ 229 (707)
+|++++ +|.... ++|+.|+|++|+|+ .++. +..+++|+.|+|++|+|++. + .+..+++| +.|+|++|+|++
T Consensus 94 ~N~l~~-l~~~~~--~~L~~L~L~~N~l~-~~~~--l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L-~~L~L~~N~i~~ 164 (263)
T 1xeu_A 94 RNRLKN-LNGIPS--ACLSRLFLDNNELR-DTDS--LIHLKNLEILSIRNNKLKSI-V-MLGFLSKL-EVLDLHGNEITN 164 (263)
T ss_dssp SSCCSC-CTTCCC--SSCCEEECCSSCCS-BSGG--GTTCTTCCEEECTTSCCCBC-G-GGGGCTTC-CEEECTTSCCCB
T ss_pred CCccCC-cCcccc--CcccEEEccCCccC-CChh--hcCcccccEEECCCCcCCCC-h-HHccCCCC-CEEECCCCcCcc
Confidence 999995 554333 99999999999999 5653 68999999999999999964 4 79999999 799999999996
Q ss_pred CCCCcCCCCCCccEEEccCCcCcccC
Q 005226 230 KIPKSLGNLPVTVSFDLRGNNLSGEI 255 (707)
Q Consensus 230 ~~p~~~~~l~~L~~l~l~~N~l~~~~ 255 (707)
. ..+..+++|+.|++++|++++.+
T Consensus 165 ~--~~l~~l~~L~~L~l~~N~~~~~~ 188 (263)
T 1xeu_A 165 T--GGLTRLKKVNWIDLTGQKCVNEP 188 (263)
T ss_dssp C--TTSTTCCCCCEEEEEEEEEECCC
T ss_pred h--HHhccCCCCCEEeCCCCcccCCc
Confidence 5 77899999999999999998663
No 349
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.79 E-value=1.4e-19 Score=175.83 Aligned_cols=154 Identities=17% Similarity=0.232 Sum_probs=105.8
Q ss_pred CCCCCCCEEEcccCCcCCCCCccccCCCCCceEEecCccCCCCCCcccCCCCCccEEeccCCcccccCCCCCcccchhhh
Q 005226 90 GSLIYLRRLNLHNNNLFGSLPDQLFNATSLHSIFLYGNNLSGSLPPSVCNLPRLQNLDLSNNSFSGSLPDGLKNCKQLQR 169 (707)
Q Consensus 90 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 169 (707)
..+++|++|+|++|.|+ .+| .+..+++|++|+|++|.++ .+..+..+++|++|+|++|++++..|..+.++++|+.
T Consensus 41 ~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~ 116 (197)
T 4ezg_A 41 AQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTL 116 (197)
T ss_dssp HHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCE
T ss_pred hhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCE
Confidence 55667777777777777 455 5777777777777777665 2346677777777777777777666777777777777
Q ss_pred hhhcCCcccccCCCcccccCCCccEEeccCCC-CCCCCCcchhhhhccccEEEeccCcCcCCCCCcCCCCCCccEEEccC
Q 005226 170 LILARNKFSGQIPAGIWPELENLVQLDLSDND-FKGPIPNDLGELQSLSATLNLSYNHLSGKIPKSLGNLPVTVSFDLRG 248 (707)
Q Consensus 170 L~l~~N~l~~~lp~~~~~~l~~L~~L~ls~N~-l~~~~p~~~~~l~~L~~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~ 248 (707)
|+|++|++++..|.. +..+++|++|+|++|+ ++ .+| .+..+++| +.|++++|++++ ++ .+..+++|+.|++++
T Consensus 117 L~Ls~n~i~~~~~~~-l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L-~~L~l~~n~i~~-~~-~l~~l~~L~~L~l~~ 190 (197)
T 4ezg_A 117 LDISHSAHDDSILTK-INTLPKVNSIDLSYNGAIT-DIM-PLKTLPEL-KSLNIQFDGVHD-YR-GIEDFPKLNQLYAFS 190 (197)
T ss_dssp EECCSSBCBGGGHHH-HTTCSSCCEEECCSCTBCC-CCG-GGGGCSSC-CEEECTTBCCCC-CT-TGGGCSSCCEEEECB
T ss_pred EEecCCccCcHhHHH-HhhCCCCCEEEccCCCCcc-ccH-hhcCCCCC-CEEECCCCCCcC-hH-HhccCCCCCEEEeeC
Confidence 777777777444433 4677777888888777 54 455 57777777 678888888774 44 677778888888888
Q ss_pred CcCcc
Q 005226 249 NNLSG 253 (707)
Q Consensus 249 N~l~~ 253 (707)
|++.+
T Consensus 191 N~i~~ 195 (197)
T 4ezg_A 191 QTIGG 195 (197)
T ss_dssp C----
T ss_pred cccCC
Confidence 87753
No 350
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.79 E-value=5.5e-19 Score=187.42 Aligned_cols=189 Identities=23% Similarity=0.371 Sum_probs=131.5
Q ss_pred CcEEEEEcCCCCccccCCCCcCCCCCCCEEEcccCCcCCCCCccccCCCCCceEEecCccCCCCCCcccCCCCCccEEec
Q 005226 69 PRVVGVAISGKNVRGYIPSELGSLIYLRRLNLHNNNLFGSLPDQLFNATSLHSIFLYGNNLSGSLPPSVCNLPRLQNLDL 148 (707)
Q Consensus 69 ~~v~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 148 (707)
++++.|+|++|++++..+ +..+++|++|+|++|.++. +| .+.++++|++|+|++|++++ +|. +..+++|+.|++
T Consensus 66 ~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~L~~n~i~~-~~-~~~~l~~L~~L~l~~n~i~~-~~~-~~~l~~L~~L~l 139 (347)
T 4fmz_A 66 TNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKITD-IS-ALQNLTNLRELYLNEDNISD-ISP-LANLTKMYSLNL 139 (347)
T ss_dssp TTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-CG-GGTTCTTCSEEECTTSCCCC-CGG-GTTCTTCCEEEC
T ss_pred CCccEEEccCCccccchh--hhcCCcCCEEEccCCcccC-ch-HHcCCCcCCEEECcCCcccC-chh-hccCCceeEEEC
Confidence 578888888888876533 7788888888888888874 33 57788888888888888874 443 777788888888
Q ss_pred cCCcccccCCCCCcccchhhhhhhcCCcccccCCCcccccCCCccEEeccCCCCCCCCCcchhhhhccccEEEeccCcCc
Q 005226 149 SNNSFSGSLPDGLKNCKQLQRLILARNKFSGQIPAGIWPELENLVQLDLSDNDFKGPIPNDLGELQSLSATLNLSYNHLS 228 (707)
Q Consensus 149 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~lp~~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~L~l~~N~l~ 228 (707)
++|.....+ ..+..+++|+.|++++|++. .++. +..+++|+.|++++|.+++ ++. +..+++| +.|++++|.++
T Consensus 140 ~~n~~~~~~-~~~~~l~~L~~L~l~~~~~~-~~~~--~~~l~~L~~L~l~~n~l~~-~~~-~~~l~~L-~~L~l~~n~l~ 212 (347)
T 4fmz_A 140 GANHNLSDL-SPLSNMTGLNYLTVTESKVK-DVTP--IANLTDLYSLSLNYNQIED-ISP-LASLTSL-HYFTAYVNQIT 212 (347)
T ss_dssp TTCTTCCCC-GGGTTCTTCCEEECCSSCCC-CCGG--GGGCTTCSEEECTTSCCCC-CGG-GGGCTTC-CEEECCSSCCC
T ss_pred CCCCCcccc-cchhhCCCCcEEEecCCCcC-Cchh--hccCCCCCEEEccCCcccc-ccc-ccCCCcc-ceeecccCCCC
Confidence 887655333 34777777777777777777 4444 5677777777777777774 333 6677777 67777777777
Q ss_pred CCCCCcCCCCCCccEEEccCCcCcccCCCCCCCCCCCCcccCCCC
Q 005226 229 GKIPKSLGNLPVTVSFDLRGNNLSGEIPQTGSFANQGPTAFLSNP 273 (707)
Q Consensus 229 ~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~~~~~~~~~~~~N~ 273 (707)
+..+ +..+++|+.|++++|++++..+ ...+.++..+.+.+|.
T Consensus 213 ~~~~--~~~~~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~l~~n~ 254 (347)
T 4fmz_A 213 DITP--VANMTRLNSLKIGNNKITDLSP-LANLSQLTWLEIGTNQ 254 (347)
T ss_dssp CCGG--GGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSC
T ss_pred CCch--hhcCCcCCEEEccCCccCCCcc-hhcCCCCCEEECCCCc
Confidence 5443 6677777777777777775544 4455556666665553
No 351
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.78 E-value=2.1e-19 Score=174.53 Aligned_cols=151 Identities=15% Similarity=0.237 Sum_probs=133.9
Q ss_pred CcEEEEEcCCCCccccCCCCcCCCCCCCEEEcccCCcCCCCCccccCCCCCceEEecCccCCCCCCcccCCCCCccEEec
Q 005226 69 PRVVGVAISGKNVRGYIPSELGSLIYLRRLNLHNNNLFGSLPDQLFNATSLHSIFLYGNNLSGSLPPSVCNLPRLQNLDL 148 (707)
Q Consensus 69 ~~v~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 148 (707)
.+++.|+|++|+++ .+| .+..+++|++|+|++|.++ .+..+..+++|++|+|++|++++..|..|+.+++|+.|+|
T Consensus 44 ~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L 119 (197)
T 4ezg_A 44 NSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDI 119 (197)
T ss_dssp HTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEEC
T ss_pred CCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEe
Confidence 57899999999999 445 7999999999999999876 3347999999999999999999888999999999999999
Q ss_pred cCCcccccCCCCCcccchhhhhhhcCCc-ccccCCCcccccCCCccEEeccCCCCCCCCCcchhhhhccccEEEeccCcC
Q 005226 149 SNNSFSGSLPDGLKNCKQLQRLILARNK-FSGQIPAGIWPELENLVQLDLSDNDFKGPIPNDLGELQSLSATLNLSYNHL 227 (707)
Q Consensus 149 s~N~l~~~~p~~~~~l~~L~~L~l~~N~-l~~~lp~~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~L~l~~N~l 227 (707)
++|++++..|..+.++++|+.|+|++|+ ++ .+| .+..+++|++|++++|++++ ++ .+..+++| +.|++++|+|
T Consensus 120 s~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~--~l~~l~~L~~L~l~~n~i~~-~~-~l~~l~~L-~~L~l~~N~i 193 (197)
T 4ezg_A 120 SHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM--PLKTLPELKSLNIQFDGVHD-YR-GIEDFPKL-NQLYAFSQTI 193 (197)
T ss_dssp CSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG--GGGGCSSCCEEECTTBCCCC-CT-TGGGCSSC-CEEEECBC--
T ss_pred cCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH--hhcCCCCCCEEECCCCCCcC-hH-HhccCCCC-CEEEeeCccc
Confidence 9999998889999999999999999998 66 787 36899999999999999995 44 88999999 8999999998
Q ss_pred cC
Q 005226 228 SG 229 (707)
Q Consensus 228 ~~ 229 (707)
.+
T Consensus 194 ~~ 195 (197)
T 4ezg_A 194 GG 195 (197)
T ss_dssp --
T ss_pred CC
Confidence 74
No 352
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.78 E-value=2.2e-19 Score=185.52 Aligned_cols=187 Identities=26% Similarity=0.318 Sum_probs=157.3
Q ss_pred EEEEcCCCCccccCCCCcCCCCCCCEEEcccCCcCCCCCccccCCCCCceEEecCccCCCCCCcccCCCCCccEEeccCC
Q 005226 72 VGVAISGKNVRGYIPSELGSLIYLRRLNLHNNNLFGSLPDQLFNATSLHSIFLYGNNLSGSLPPSVCNLPRLQNLDLSNN 151 (707)
Q Consensus 72 ~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 151 (707)
..+.+..+.+.+.. .+..+++|+.|++++|.++.. + .+..+++|++|+|++|+|++..+ +..+++|+.|+|++|
T Consensus 27 ~~~~l~~~~~~~~~--~~~~l~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n 100 (291)
T 1h6t_A 27 IKDNLKKKSVTDAV--TQNELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDEN 100 (291)
T ss_dssp HHHHTTCSCTTSEE--CHHHHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSS
T ss_pred HHHHhcCCCccccc--chhhcCcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCC
Confidence 34456666666543 356789999999999999854 4 48999999999999999995544 999999999999999
Q ss_pred cccccCCCCCcccchhhhhhhcCCcccccCCCcccccCCCccEEeccCCCCCCCCCcchhhhhccccEEEeccCcCcCCC
Q 005226 152 SFSGSLPDGLKNCKQLQRLILARNKFSGQIPAGIWPELENLVQLDLSDNDFKGPIPNDLGELQSLSATLNLSYNHLSGKI 231 (707)
Q Consensus 152 ~l~~~~p~~~~~l~~L~~L~l~~N~l~~~lp~~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~L~l~~N~l~~~~ 231 (707)
++++ +| .+.++++|+.|+|++|+|+ .++ .+..+++|+.|+|++|+|++. ..+..+++| +.|+|++|+|++..
T Consensus 101 ~l~~-~~-~l~~l~~L~~L~L~~n~i~-~~~--~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L-~~L~L~~N~l~~~~ 172 (291)
T 1h6t_A 101 KVKD-LS-SLKDLKKLKSLSLEHNGIS-DIN--GLVHLPQLESLYLGNNKITDI--TVLSRLTKL-DTLSLEDNQISDIV 172 (291)
T ss_dssp CCCC-GG-GGTTCTTCCEEECTTSCCC-CCG--GGGGCTTCCEEECCSSCCCCC--GGGGGCTTC-SEEECCSSCCCCCG
T ss_pred cCCC-Ch-hhccCCCCCEEECCCCcCC-CCh--hhcCCCCCCEEEccCCcCCcc--hhhccCCCC-CEEEccCCccccch
Confidence 9985 44 4999999999999999999 564 357999999999999999964 689999999 89999999999765
Q ss_pred CCcCCCCCCccEEEccCCcCcccCCCCCCCCCCCCcccCCCCcc
Q 005226 232 PKSLGNLPVTVSFDLRGNNLSGEIPQTGSFANQGPTAFLSNPLL 275 (707)
Q Consensus 232 p~~~~~l~~L~~l~l~~N~l~~~~p~~~~~~~~~~~~~~~N~~l 275 (707)
| +..+++|+.|++++|++++. |....+.++..+.+.+|+..
T Consensus 173 ~--l~~l~~L~~L~L~~N~i~~l-~~l~~l~~L~~L~l~~n~i~ 213 (291)
T 1h6t_A 173 P--LAGLTKLQNLYLSKNHISDL-RALAGLKNLDVLELFSQECL 213 (291)
T ss_dssp G--GTTCTTCCEEECCSSCCCBC-GGGTTCTTCSEEEEEEEEEE
T ss_pred h--hcCCCccCEEECCCCcCCCC-hhhccCCCCCEEECcCCccc
Confidence 5 89999999999999999964 55667777888888887643
No 353
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.78 E-value=1.7e-19 Score=204.28 Aligned_cols=188 Identities=25% Similarity=0.324 Sum_probs=162.4
Q ss_pred cEEEEEcCCCCccccCCCCcCCCCCCCEEEcccCCcCCCCCccccCCCCCceEEecCccCCCCCCcccCCCCCccEEecc
Q 005226 70 RVVGVAISGKNVRGYIPSELGSLIYLRRLNLHNNNLFGSLPDQLFNATSLHSIFLYGNNLSGSLPPSVCNLPRLQNLDLS 149 (707)
Q Consensus 70 ~v~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 149 (707)
.+..+.|..+.+...++ +..|++|+.|+|++|.|.. +| .+..+++|+.|+|++|+|++..| +..+++|+.|+|+
T Consensus 22 ~l~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls 95 (605)
T 1m9s_A 22 ETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLD 95 (605)
T ss_dssp HHHHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCCC-CT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECC
T ss_pred HHHHHhccCCCcccccc--hhcCCCCCEEECcCCCCCC-Ch-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECc
Confidence 34556677777776644 6789999999999999984 45 59999999999999999996544 9999999999999
Q ss_pred CCcccccCCCCCcccchhhhhhhcCCcccccCCCcccccCCCccEEeccCCCCCCCCCcchhhhhccccEEEeccCcCcC
Q 005226 150 NNSFSGSLPDGLKNCKQLQRLILARNKFSGQIPAGIWPELENLVQLDLSDNDFKGPIPNDLGELQSLSATLNLSYNHLSG 229 (707)
Q Consensus 150 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~lp~~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~L~l~~N~l~~ 229 (707)
+|+|++ +| .+..+++|+.|+|++|+|+ .++. +..+++|+.|+|++|+|++. ..+..+++| +.|+|++|+|++
T Consensus 96 ~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~-~l~~--l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L-~~L~Ls~N~l~~ 167 (605)
T 1m9s_A 96 ENKIKD-LS-SLKDLKKLKSLSLEHNGIS-DING--LVHLPQLESLYLGNNKITDI--TVLSRLTKL-DTLSLEDNQISD 167 (605)
T ss_dssp SSCCCC-CT-TSTTCTTCCEEECTTSCCC-CCGG--GGGCTTCSEEECCSSCCCCC--GGGGSCTTC-SEEECCSSCCCC
T ss_pred CCCCCC-Ch-hhccCCCCCEEEecCCCCC-CCcc--ccCCCccCEEECCCCccCCc--hhhcccCCC-CEEECcCCcCCC
Confidence 999984 44 7999999999999999999 5653 67999999999999999965 689999999 899999999998
Q ss_pred CCCCcCCCCCCccEEEccCCcCcccCCCCCCCCCCCCcccCCCCc
Q 005226 230 KIPKSLGNLPVTVSFDLRGNNLSGEIPQTGSFANQGPTAFLSNPL 274 (707)
Q Consensus 230 ~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~~~~~~~~~~~~N~~ 274 (707)
..| +..+++|+.|+|++|+|++. |....+.++..+.+.+|+.
T Consensus 168 ~~~--l~~l~~L~~L~Ls~N~i~~l-~~l~~l~~L~~L~L~~N~l 209 (605)
T 1m9s_A 168 IVP--LAGLTKLQNLYLSKNHISDL-RALAGLKNLDVLELFSQEC 209 (605)
T ss_dssp CGG--GTTCTTCCEEECCSSCCCBC-GGGTTCTTCSEEECCSEEE
T ss_pred chh--hccCCCCCEEECcCCCCCCC-hHHccCCCCCEEEccCCcC
Confidence 777 99999999999999999975 6667778888888888864
No 354
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.78 E-value=5.2e-19 Score=179.32 Aligned_cols=133 Identities=20% Similarity=0.224 Sum_probs=104.3
Q ss_pred cceecccCeeEEEEEEe-CCCce--EEEEEcCCCchh------------------------hHHHHHHHHHHHHhcCCCc
Q 005226 412 AYVLGKSGLGIVYKVVL-GNGIP--VAVRRLGEGGEQ------------------------RHREFVTEVQAIAKVKHPN 464 (707)
Q Consensus 412 ~~~lG~G~~g~Vy~~~~-~~~~~--vavK~~~~~~~~------------------------~~~~~~~E~~~l~~l~H~n 464 (707)
...||+|+||.||+|.. .+|.. ||||+++..... ....+.+|++++.+++|++
T Consensus 52 ~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 131 (258)
T 1zth_A 52 GGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAKEAG 131 (258)
T ss_dssp EEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHHhCC
Confidence 45899999999999997 68888 999986543111 1136789999999998876
Q ss_pred e--eeeEEEEEcCCcceEEEEeecC-C----ChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHh-hcCCCCceecC
Q 005226 465 I--VKLRAYYWAPDEKLLISDFISN-G----NLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLH-ECSPRKFVHGD 536 (707)
Q Consensus 465 i--v~l~~~~~~~~~~~lV~e~~~~-g----sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH-~~~~~~iiHrD 536 (707)
+ ..++++ +..++||||+.+ | +|.++... .++..+..++.|++.||+||| + .+|+|||
T Consensus 132 i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~--------~~~~~~~~i~~qi~~~l~~lH~~---~givHrD 196 (258)
T 1zth_A 132 VSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE--------LKELDVEGIFNDVVENVKRLYQE---AELVHAD 196 (258)
T ss_dssp CCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG--------GGGSCHHHHHHHHHHHHHHHHHT---SCEECSS
T ss_pred CCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc--------cChHHHHHHHHHHHHHHHHHHHH---CCEEeCC
Confidence 4 344432 467999999943 4 67666532 224457789999999999999 8 7999999
Q ss_pred CCCCCeEEcCCCCeEEecccccccc
Q 005226 537 IKPSNILLDNDFQPYISDFGLSRLI 561 (707)
Q Consensus 537 lk~~NIll~~~~~~kl~DfGla~~~ 561 (707)
|||+|||++. .++|+|||+|...
T Consensus 197 lkp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 197 LSEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp CSTTSEEESS--SEEECCCTTCEET
T ss_pred CCHHHEEEcC--cEEEEECcccccC
Confidence 9999999998 9999999999754
No 355
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.77 E-value=2.1e-19 Score=173.72 Aligned_cols=131 Identities=25% Similarity=0.315 Sum_probs=107.9
Q ss_pred EEEcCCCCccccCCCCcCCCCCCCEEEcccCCcCCCCCc-cccCCCCCceEEecCccCCCCCCcccCCCCCccEEeccCC
Q 005226 73 GVAISGKNVRGYIPSELGSLIYLRRLNLHNNNLFGSLPD-QLFNATSLHSIFLYGNNLSGSLPPSVCNLPRLQNLDLSNN 151 (707)
Q Consensus 73 ~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 151 (707)
.|++++|+++ .+|..+.. +|++|+|++|+|++..+. .|.++++|++|+|++|+|++..|..|.++++|+.|+|++|
T Consensus 12 ~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 88 (192)
T 1w8a_A 12 TVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGEN 88 (192)
T ss_dssp EEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSC
T ss_pred EEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCC
Confidence 3455667775 56766644 899999999999977665 4889999999999999999888999999999999999999
Q ss_pred cccccCCCCCcccchhhhhhhcCCcccccCCCcccccCCCccEEeccCCCCCCCCC
Q 005226 152 SFSGSLPDGLKNCKQLQRLILARNKFSGQIPAGIWPELENLVQLDLSDNDFKGPIP 207 (707)
Q Consensus 152 ~l~~~~p~~~~~l~~L~~L~l~~N~l~~~lp~~~~~~l~~L~~L~ls~N~l~~~~p 207 (707)
+|++..|..|.++++|+.|+|++|+|++.+| ..|..+++|++|+|++|.+++..+
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 89 KIKEISNKMFLGLHQLKTLNLYDNQISCVMP-GSFEHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp CCCEECSSSSTTCTTCCEEECCSSCCCEECT-TSSTTCTTCCEEECTTCCBCCSGG
T ss_pred cCCccCHHHhcCCCCCCEEECCCCcCCeeCH-HHhhcCCCCCEEEeCCCCccCcCc
Confidence 9998888888888899999999998885444 445788888888888888886544
No 356
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.76 E-value=2.2e-19 Score=197.36 Aligned_cols=183 Identities=20% Similarity=0.214 Sum_probs=108.4
Q ss_pred CcEEEEEcCCCCccccCCCCcCCCCCCCEEEcccCCcCCCCCccccCCCCC-------------ceEEecCccCCCCCCc
Q 005226 69 PRVVGVAISGKNVRGYIPSELGSLIYLRRLNLHNNNLFGSLPDQLFNATSL-------------HSIFLYGNNLSGSLPP 135 (707)
Q Consensus 69 ~~v~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L-------------~~L~L~~N~l~~~~p~ 135 (707)
.+++.|++++|++ |.+|.++++|++|++|+|++|+++|.+|..++++++| ++|++++|.+++ +|.
T Consensus 11 ~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~-lp~ 88 (454)
T 1jl5_A 11 TFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSS-LPE 88 (454)
T ss_dssp ------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSC-CCS
T ss_pred ccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCcccc-CCC
Confidence 5788899999998 7888889999999999999999988889888887764 888888888884 444
Q ss_pred ccCCCCCccEEeccCCcccccCCCCCcccchhhhhhhcCCcccccCCCcccccCCCccEEeccCCCCCCCCCcchhhhhc
Q 005226 136 SVCNLPRLQNLDLSNNSFSGSLPDGLKNCKQLQRLILARNKFSGQIPAGIWPELENLVQLDLSDNDFKGPIPNDLGELQS 215 (707)
Q Consensus 136 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~lp~~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~ 215 (707)
. .++|+.|++++|++++ +|..+ ++|+.|++++|+++ .+|.. .++|++|++++|++++ +| .|+++++
T Consensus 89 ~---~~~L~~L~l~~n~l~~-lp~~~---~~L~~L~l~~n~l~-~l~~~----~~~L~~L~L~~n~l~~-lp-~~~~l~~ 154 (454)
T 1jl5_A 89 L---PPHLESLVASCNSLTE-LPELP---QSLKSLLVDNNNLK-ALSDL----PPLLEYLGVSNNQLEK-LP-ELQNSSF 154 (454)
T ss_dssp C---CTTCSEEECCSSCCSS-CCCCC---TTCCEEECCSSCCS-CCCSC----CTTCCEEECCSSCCSS-CC-CCTTCTT
T ss_pred C---cCCCCEEEccCCcCCc-ccccc---CCCcEEECCCCccC-cccCC----CCCCCEEECcCCCCCC-Cc-ccCCCCC
Confidence 2 3678888888888875 66533 56777777777776 44431 1567777777777764 55 4666777
Q ss_pred cccEEEeccCcCcCCCCCcCCCCCCccEEEccCCcCcccCCCCCCCCCCCCcccCCCC
Q 005226 216 LSATLNLSYNHLSGKIPKSLGNLPVTVSFDLRGNNLSGEIPQTGSFANQGPTAFLSNP 273 (707)
Q Consensus 216 L~~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~~~~~~~~~~~~N~ 273 (707)
| ++|++++|++++ +|..+ .+|+.|++++|++++ +|....+.++..+.+.+|.
T Consensus 155 L-~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~~~~~l~~L~~L~l~~N~ 206 (454)
T 1jl5_A 155 L-KIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LPELQNLPFLTAIYADNNS 206 (454)
T ss_dssp C-CEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CCCCTTCTTCCEEECCSSC
T ss_pred C-CEEECCCCcCcc-cCCCc---ccccEEECcCCcCCc-CccccCCCCCCEEECCCCc
Confidence 7 577777777764 55432 366667777777665 4455555555555555553
No 357
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.76 E-value=2.2e-20 Score=197.28 Aligned_cols=201 Identities=19% Similarity=0.222 Sum_probs=150.9
Q ss_pred CcEEEEEcCCCCccccCCCCcCCCCCCCEEEcccCCcCCC-CCccccCCCCCceEEecCccCCCCCCcccCCCCCccEEe
Q 005226 69 PRVVGVAISGKNVRGYIPSELGSLIYLRRLNLHNNNLFGS-LPDQLFNATSLHSIFLYGNNLSGSLPPSVCNLPRLQNLD 147 (707)
Q Consensus 69 ~~v~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 147 (707)
.+++.|++++|.+.+..+. +..+++|++|+|++|.+++. +|..+.++++|++|+|++|++++..|..++.+++|++|+
T Consensus 70 ~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~ 148 (336)
T 2ast_B 70 QGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLN 148 (336)
T ss_dssp TTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEE
T ss_pred ccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEE
Confidence 5678888888888877555 56788888888888888765 777788888888888888888877788888888888888
Q ss_pred ccCC-ccccc-CCCCCcccchhhhhhhcCC-ccccc-CCCcccccCC-CccEEeccCC--CCC-CCCCcchhhhhccccE
Q 005226 148 LSNN-SFSGS-LPDGLKNCKQLQRLILARN-KFSGQ-IPAGIWPELE-NLVQLDLSDN--DFK-GPIPNDLGELQSLSAT 219 (707)
Q Consensus 148 Ls~N-~l~~~-~p~~~~~l~~L~~L~l~~N-~l~~~-lp~~~~~~l~-~L~~L~ls~N--~l~-~~~p~~~~~l~~L~~~ 219 (707)
|++| .+++. ++..+.++++|++|+|++| ++++. ++. .+..++ +|++|+|++| .++ +.+|..+.++++| +.
T Consensus 149 L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~-~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L-~~ 226 (336)
T 2ast_B 149 LSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQV-AVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNL-VH 226 (336)
T ss_dssp CTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHH-HHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTC-SE
T ss_pred CCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHH-HHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCC-CE
Confidence 8888 67652 6666788888888888888 88743 333 346788 8888888888 455 4566777888888 78
Q ss_pred EEeccCc-CcCCCCCcCCCCCCccEEEccCCc-Cccc-CCCCCCCCCCCCcccCCC
Q 005226 220 LNLSYNH-LSGKIPKSLGNLPVTVSFDLRGNN-LSGE-IPQTGSFANQGPTAFLSN 272 (707)
Q Consensus 220 L~l~~N~-l~~~~p~~~~~l~~L~~l~l~~N~-l~~~-~p~~~~~~~~~~~~~~~N 272 (707)
|++++|. +++..+..+..+++|+.|++++|. ++.. +.....+.++..+.+.+|
T Consensus 227 L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~ 282 (336)
T 2ast_B 227 LDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI 282 (336)
T ss_dssp EECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS
T ss_pred EeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCCHHHHHHHhcCCCCCEEeccCc
Confidence 8888888 776777788888888888888885 2211 111233455555666554
No 358
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.75 E-value=3.4e-18 Score=162.83 Aligned_cols=138 Identities=23% Similarity=0.319 Sum_probs=113.0
Q ss_pred CCCceeceeEeCCCCCCCCCcEEEEEcCCCCccccCCCCcCCCCCCCEEEcccCCcCCCCCccccCCCCCceEEecCccC
Q 005226 50 PTPCRWSGISCMNITGFPDPRVVGVAISGKNVRGYIPSELGSLIYLRRLNLHNNNLFGSLPDQLFNATSLHSIFLYGNNL 129 (707)
Q Consensus 50 ~~~C~w~gv~c~~~~~~~~~~v~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l 129 (707)
.|.|+|.+|.|.. |+++ .+|..+ .++|++|+|++|+|++..+..|.++++|++|+|++|+|
T Consensus 4 ~C~C~~~~l~~~~----------------~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l 64 (177)
T 2o6r_A 4 RCSCSGTEIRCNS----------------KGLT-SVPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQI 64 (177)
T ss_dssp TCEEETTEEECCS----------------SCCS-SCCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCC
T ss_pred CCEeCCCEEEecC----------------CCCc-cCCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcc
Confidence 4668899888864 3444 234333 36899999999999977777788999999999999999
Q ss_pred CCCCCcccCCCCCccEEeccCCcccccCCCCCcccchhhhhhhcCCcccccCCCcccccCCCccEEeccCCCCCCCCC
Q 005226 130 SGSLPPSVCNLPRLQNLDLSNNSFSGSLPDGLKNCKQLQRLILARNKFSGQIPAGIWPELENLVQLDLSDNDFKGPIP 207 (707)
Q Consensus 130 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~lp~~~~~~l~~L~~L~ls~N~l~~~~p 207 (707)
++..+..|..+++|+.|+|++|+|++..+..|.++++|+.|+|++|+|+ .+|...|..+++|++|+|++|.+.+..|
T Consensus 65 ~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 65 QSLPDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp CCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCS-CCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred eEeChhHccCCCccCEEECCCCCccccCHHHhhCCcccCEEECcCCcce-EeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 9776777899999999999999999776777888899999999999998 7888888888999999999999886544
No 359
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.75 E-value=9.5e-21 Score=204.28 Aligned_cols=204 Identities=18% Similarity=0.244 Sum_probs=141.5
Q ss_pred CcEEEEEcCCCCcccc----CCCCcCCCCCCCEEEcccC---CcCCCCCccc-------cCCCCCceEEecCccCCC---
Q 005226 69 PRVVGVAISGKNVRGY----IPSELGSLIYLRRLNLHNN---NLFGSLPDQL-------FNATSLHSIFLYGNNLSG--- 131 (707)
Q Consensus 69 ~~v~~L~L~~n~l~~~----~~~~l~~l~~L~~L~L~~N---~l~~~~p~~~-------~~l~~L~~L~L~~N~l~~--- 131 (707)
++++.|+|++|++.+. ++..|..+++|++|+|++| ++++.+|..+ .++++|++|+|++|+|++
T Consensus 32 ~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~ 111 (386)
T 2ca6_A 32 DSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQ 111 (386)
T ss_dssp SCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCTTTH
T ss_pred CCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCCcCCHHHH
Confidence 4678888888888775 3344677888888888885 4444555554 677888888888888886
Q ss_pred -CCCcccCCCCCccEEeccCCcccccCCCCC----ccc---------chhhhhhhcCCccc-ccCCC--cccccCCCccE
Q 005226 132 -SLPPSVCNLPRLQNLDLSNNSFSGSLPDGL----KNC---------KQLQRLILARNKFS-GQIPA--GIWPELENLVQ 194 (707)
Q Consensus 132 -~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~----~~l---------~~L~~L~l~~N~l~-~~lp~--~~~~~l~~L~~ 194 (707)
.+|..+..+++|+.|+|++|.|+...+..+ ..+ ++|++|+|++|+|+ +.+|. ..+..+++|++
T Consensus 112 ~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~ 191 (386)
T 2ca6_A 112 EPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHT 191 (386)
T ss_dssp HHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCE
T ss_pred HHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCE
Confidence 367777788888888888888864433333 333 78888888888886 33442 23456778888
Q ss_pred EeccCCCCCC-----CCCcchhhhhccccEEEeccCcCc----CCCCCcCCCCCCccEEEccCCcCccc----CCCC---
Q 005226 195 LDLSDNDFKG-----PIPNDLGELQSLSATLNLSYNHLS----GKIPKSLGNLPVTVSFDLRGNNLSGE----IPQT--- 258 (707)
Q Consensus 195 L~ls~N~l~~-----~~p~~~~~l~~L~~~L~l~~N~l~----~~~p~~~~~l~~L~~l~l~~N~l~~~----~p~~--- 258 (707)
|+|++|+|+. .+|..+..+++| +.|+|++|.|+ +.+|..+..+++|+.|+|++|++++. +|..
T Consensus 192 L~L~~n~l~~~g~~~l~~~~l~~~~~L-~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~ 270 (386)
T 2ca6_A 192 VKMVQNGIRPEGIEHLLLEGLAYCQEL-KVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSK 270 (386)
T ss_dssp EECCSSCCCHHHHHHHHHTTGGGCTTC-CEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHT
T ss_pred EECcCCCCCHhHHHHHHHHHhhcCCCc-cEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHHHHHhh
Confidence 8888888762 234467777888 68888888885 56777777888888888888888764 2321
Q ss_pred CCCCCCCCcccCCCC
Q 005226 259 GSFANQGPTAFLSNP 273 (707)
Q Consensus 259 ~~~~~~~~~~~~~N~ 273 (707)
....++..+.+.+|.
T Consensus 271 ~~~~~L~~L~L~~n~ 285 (386)
T 2ca6_A 271 LENIGLQTLRLQYNE 285 (386)
T ss_dssp CSSCCCCEEECCSSC
T ss_pred ccCCCeEEEECcCCc
Confidence 224555666666654
No 360
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.75 E-value=1e-17 Score=183.97 Aligned_cols=178 Identities=26% Similarity=0.341 Sum_probs=121.4
Q ss_pred CcEEEEEcCCCCccccCCCCcCCCCCCCEEEcccCCcCCCCCccccCCCCCceEEecCccCCCCCCcccCCCCCccEEec
Q 005226 69 PRVVGVAISGKNVRGYIPSELGSLIYLRRLNLHNNNLFGSLPDQLFNATSLHSIFLYGNNLSGSLPPSVCNLPRLQNLDL 148 (707)
Q Consensus 69 ~~v~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 148 (707)
++++.|+|++|.+++ +|.. +++|++|+|++|++++ +|.. .++|++|+|++|++++ +| .|+++++|++|++
T Consensus 91 ~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~-l~~~---~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l 160 (454)
T 1jl5_A 91 PHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKA-LSDL---PPLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDV 160 (454)
T ss_dssp TTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSC-CCSC---CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEEC
T ss_pred CCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCc-ccCC---CCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEEC
Confidence 578888888888887 5543 3677788888887774 3321 1577888888888874 66 5777888888888
Q ss_pred cCCcccccCCCCCcccchhhhhhhcCCcccccCCCcccccCCCccEEeccCCCCCCCCCcchhhhhccccEEEeccCcCc
Q 005226 149 SNNSFSGSLPDGLKNCKQLQRLILARNKFSGQIPAGIWPELENLVQLDLSDNDFKGPIPNDLGELQSLSATLNLSYNHLS 228 (707)
Q Consensus 149 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~lp~~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~L~l~~N~l~ 228 (707)
++|++++ +|..+ .+|++|++++|+++ .+|. +..+++|++|++++|++++ +|... ++| ++|++++|+++
T Consensus 161 ~~N~l~~-lp~~~---~~L~~L~L~~n~l~-~l~~--~~~l~~L~~L~l~~N~l~~-l~~~~---~~L-~~L~l~~n~l~ 228 (454)
T 1jl5_A 161 DNNSLKK-LPDLP---PSLEFIAAGNNQLE-ELPE--LQNLPFLTAIYADNNSLKK-LPDLP---LSL-ESIVAGNNILE 228 (454)
T ss_dssp CSSCCSC-CCCCC---TTCCEEECCSSCCS-SCCC--CTTCTTCCEEECCSSCCSS-CCCCC---TTC-CEEECCSSCCS
T ss_pred CCCcCcc-cCCCc---ccccEEECcCCcCC-cCcc--ccCCCCCCEEECCCCcCCc-CCCCc---Ccc-cEEECcCCcCC
Confidence 8887774 55543 47777778888777 4663 5677777777777777774 44433 356 67777777777
Q ss_pred CCCCCcCCCCCCccEEEccCCcCcccCCCCCCCCCCCCcccCCCC
Q 005226 229 GKIPKSLGNLPVTVSFDLRGNNLSGEIPQTGSFANQGPTAFLSNP 273 (707)
Q Consensus 229 ~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~~~~~~~~~~~~N~ 273 (707)
.+|. +..+++|+.|++++|++++ +|. ...++..+.+.+|.
T Consensus 229 -~lp~-~~~l~~L~~L~l~~N~l~~-l~~--~~~~L~~L~l~~N~ 268 (454)
T 1jl5_A 229 -ELPE-LQNLPFLTTIYADNNLLKT-LPD--LPPSLEALNVRDNY 268 (454)
T ss_dssp -SCCC-CTTCTTCCEEECCSSCCSS-CCS--CCTTCCEEECCSSC
T ss_pred -cccc-cCCCCCCCEEECCCCcCCc-ccc--cccccCEEECCCCc
Confidence 5663 7777777777777777775 332 23455555555554
No 361
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.75 E-value=6.5e-19 Score=170.23 Aligned_cols=129 Identities=26% Similarity=0.415 Sum_probs=81.9
Q ss_pred CEEEcccCCcCCCCCccccCCCCCceEEecCccCCCCCCc-ccCCCCCccEEeccCCcccccCCCCCcccchhhhhhhcC
Q 005226 96 RRLNLHNNNLFGSLPDQLFNATSLHSIFLYGNNLSGSLPP-SVCNLPRLQNLDLSNNSFSGSLPDGLKNCKQLQRLILAR 174 (707)
Q Consensus 96 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~ 174 (707)
+.|++++|+|+ .+|..+.. +|++|+|++|+|++..+. .|..+++|+.|+|++|+|++..|..|.++++|++|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 67888888886 56665543 777888888887755553 377777777777777777766666666666666666666
Q ss_pred CcccccCCCcccccCCCccEEeccCCCCCCCCCcchhhhhccccEEEeccCcCcC
Q 005226 175 NKFSGQIPAGIWPELENLVQLDLSDNDFKGPIPNDLGELQSLSATLNLSYNHLSG 229 (707)
Q Consensus 175 N~l~~~lp~~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~L~l~~N~l~~ 229 (707)
|+|+ .++...|..+++|++|+|++|+|++..|..|..+++| ++|+|++|.+++
T Consensus 88 N~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L-~~L~L~~N~l~c 140 (192)
T 1w8a_A 88 NKIK-EISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSL-TSLNLASNPFNC 140 (192)
T ss_dssp CCCC-EECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTC-CEEECTTCCBCC
T ss_pred CcCC-ccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCC-CEEEeCCCCccC
Confidence 6666 4444444555555555555555555555555555555 455555555543
No 362
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.75 E-value=6.8e-21 Score=201.21 Aligned_cols=211 Identities=20% Similarity=0.237 Sum_probs=176.6
Q ss_pred CCceeceeEeCCCCCCCCCcEEEEEcCCCCccccCCCCcCCC--CCCCEEEcccCCcCCCCCccccCCCCCceEEecCcc
Q 005226 51 TPCRWSGISCMNITGFPDPRVVGVAISGKNVRGYIPSELGSL--IYLRRLNLHNNNLFGSLPDQLFNATSLHSIFLYGNN 128 (707)
Q Consensus 51 ~~C~w~gv~c~~~~~~~~~~v~~L~L~~n~l~~~~~~~l~~l--~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~ 128 (707)
.|.+|.++.|.. ..++.|++++|++. +..+..+ ++|+.|++++|.+++..+. +.++++|++|+|++|.
T Consensus 35 vc~~W~~~~~~~------~~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~ 104 (336)
T 2ast_B 35 VCKRWYRLASDE------SLWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSV 104 (336)
T ss_dssp SCHHHHHHHTCS------TTSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCE
T ss_pred HHHHHHHHhcCc------hhheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCC
Confidence 345799998753 45889999999887 4567777 8999999999999977665 6789999999999999
Q ss_pred CCCC-CCcccCCCCCccEEeccCCcccccCCCCCcccchhhhhhhcCC-ccccc-CCCcccccCCCccEEeccCC-CCCC
Q 005226 129 LSGS-LPPSVCNLPRLQNLDLSNNSFSGSLPDGLKNCKQLQRLILARN-KFSGQ-IPAGIWPELENLVQLDLSDN-DFKG 204 (707)
Q Consensus 129 l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N-~l~~~-lp~~~~~~l~~L~~L~ls~N-~l~~ 204 (707)
+++. +|..+..+++|++|+|++|.+++..|..+.++++|++|+|++| .+++. ++ ..+..+++|++|+|++| .+++
T Consensus 105 l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~-~~~~~~~~L~~L~l~~~~~l~~ 183 (336)
T 2ast_B 105 IEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQ-TLLSSCSRLDELNLSWCFDFTE 183 (336)
T ss_dssp ECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHH-HHHHHCTTCCEEECCCCTTCCH
T ss_pred cCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHH-HHHhcCCCCCEEcCCCCCCcCh
Confidence 9865 8888999999999999999999888999999999999999999 67743 44 34578999999999999 9986
Q ss_pred C-CCcchhhhh-ccccEEEeccC--cCc-CCCCCcCCCCCCccEEEccCCc-Cccc-CCCCCCCCCCCCcccCCCC
Q 005226 205 P-IPNDLGELQ-SLSATLNLSYN--HLS-GKIPKSLGNLPVTVSFDLRGNN-LSGE-IPQTGSFANQGPTAFLSNP 273 (707)
Q Consensus 205 ~-~p~~~~~l~-~L~~~L~l~~N--~l~-~~~p~~~~~l~~L~~l~l~~N~-l~~~-~p~~~~~~~~~~~~~~~N~ 273 (707)
. ++..+..++ +| ++|+|++| .++ +.+|..+..+++|+.|++++|. +++. ++....+.++..+.+.+|.
T Consensus 184 ~~~~~~~~~l~~~L-~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~ 258 (336)
T 2ast_B 184 KHVQVAVAHVSETI-TQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCY 258 (336)
T ss_dssp HHHHHHHHHSCTTC-CEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCT
T ss_pred HHHHHHHHhcccCC-CEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCC
Confidence 4 677889999 99 89999999 555 4677788889999999999999 6654 3344556677777777775
No 363
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.74 E-value=1e-20 Score=204.01 Aligned_cols=204 Identities=20% Similarity=0.216 Sum_probs=163.6
Q ss_pred CcEEEEEcCCC---CccccCCCCc-------CCCCCCCEEEcccCCcCC----CCCccccCCCCCceEEecCccCCCCCC
Q 005226 69 PRVVGVAISGK---NVRGYIPSEL-------GSLIYLRRLNLHNNNLFG----SLPDQLFNATSLHSIFLYGNNLSGSLP 134 (707)
Q Consensus 69 ~~v~~L~L~~n---~l~~~~~~~l-------~~l~~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~p 134 (707)
++++.|+|++| ++.+.+|..+ ..+++|++|+|++|.|++ .+|..+.++++|++|+|++|.|+...+
T Consensus 60 ~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~ 139 (386)
T 2ca6_A 60 KDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAG 139 (386)
T ss_dssp TTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHH
T ss_pred CCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHH
Confidence 68999999996 5556666655 789999999999999997 478889999999999999999974444
Q ss_pred cccC----CC---------CCccEEeccCCccc-ccCC---CCCcccchhhhhhhcCCccccc----CCCcccccCCCcc
Q 005226 135 PSVC----NL---------PRLQNLDLSNNSFS-GSLP---DGLKNCKQLQRLILARNKFSGQ----IPAGIWPELENLV 193 (707)
Q Consensus 135 ~~~~----~l---------~~L~~L~Ls~N~l~-~~~p---~~~~~l~~L~~L~l~~N~l~~~----lp~~~~~~l~~L~ 193 (707)
..+. .+ ++|+.|+|++|+++ +.+| ..+..+++|+.|+|++|+|+.. +....+..+++|+
T Consensus 140 ~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~ 219 (386)
T 2ca6_A 140 AKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELK 219 (386)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCC
T ss_pred HHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCcc
Confidence 4333 34 89999999999997 4455 4677899999999999999721 2222357899999
Q ss_pred EEeccCCCCC----CCCCcchhhhhccccEEEeccCcCcCC----CCCcC--CCCCCccEEEccCCcCcc----cCCCC-
Q 005226 194 QLDLSDNDFK----GPIPNDLGELQSLSATLNLSYNHLSGK----IPKSL--GNLPVTVSFDLRGNNLSG----EIPQT- 258 (707)
Q Consensus 194 ~L~ls~N~l~----~~~p~~~~~l~~L~~~L~l~~N~l~~~----~p~~~--~~l~~L~~l~l~~N~l~~----~~p~~- 258 (707)
+|+|++|.|+ +.+|..+..+++| +.|+|++|.|++. +|..+ +.+++|+.|+|++|++++ .+|..
T Consensus 220 ~L~Ls~n~l~~~g~~~l~~~l~~~~~L-~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l 298 (386)
T 2ca6_A 220 VLDLQDNTFTHLGSSALAIALKSWPNL-RELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVI 298 (386)
T ss_dssp EEECCSSCCHHHHHHHHHHHGGGCTTC-CEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHH
T ss_pred EEECcCCCCCcHHHHHHHHHHccCCCc-CEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHH
Confidence 9999999996 5788899999999 7999999999865 56666 448999999999999998 35532
Q ss_pred -CCCCCCCCcccCCCC
Q 005226 259 -GSFANQGPTAFLSNP 273 (707)
Q Consensus 259 -~~~~~~~~~~~~~N~ 273 (707)
..+.++..+.+.+|+
T Consensus 299 ~~~l~~L~~L~l~~N~ 314 (386)
T 2ca6_A 299 DEKMPDLLFLELNGNR 314 (386)
T ss_dssp HHHCTTCCEEECTTSB
T ss_pred HhcCCCceEEEccCCc
Confidence 224667777777765
No 364
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.74 E-value=2.6e-21 Score=217.88 Aligned_cols=180 Identities=23% Similarity=0.278 Sum_probs=125.6
Q ss_pred cEEEEEcCCCCccccCCCCcCCCCCCCEEEcccCC-------------cCCCCCccccCCCCCceEE-ecCccCCCCCCc
Q 005226 70 RVVGVAISGKNVRGYIPSELGSLIYLRRLNLHNNN-------------LFGSLPDQLFNATSLHSIF-LYGNNLSGSLPP 135 (707)
Q Consensus 70 ~v~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~-------------l~~~~p~~~~~l~~L~~L~-L~~N~l~~~~p~ 135 (707)
+++.|+|++|+|+ .+|..+++|++|+.|++++|. +.+.+|..+.++++|+.|+ ++.|.+. .++.
T Consensus 350 ~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~-~L~~ 427 (567)
T 1dce_A 350 QLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLD-DLRS 427 (567)
T ss_dssp TSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHH-HHHH
T ss_pred cceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccc-hhhh
Confidence 4445666666665 446666666666666665553 3445555556666666665 4444322 1110
Q ss_pred ------ccCC--CCCccEEeccCCcccccCCCCCcccchhhhhhhcCCcccccCCCcccccCCCccEEeccCCCCCCCCC
Q 005226 136 ------SVCN--LPRLQNLDLSNNSFSGSLPDGLKNCKQLQRLILARNKFSGQIPAGIWPELENLVQLDLSDNDFKGPIP 207 (707)
Q Consensus 136 ------~~~~--l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~lp~~~~~~l~~L~~L~ls~N~l~~~~p 207 (707)
.+.. ...|+.|+|++|+|++ +|. |.++++|+.|+|++|+|+ .+|..+ ..+++|+.|+|++|+|++ +|
T Consensus 428 l~l~~n~i~~l~~~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~-~~l~~L~~L~Ls~N~l~~-lp 502 (567)
T 1dce_A 428 KFLLENSVLKMEYADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPAL-AALRCLEVLQASDNALEN-VD 502 (567)
T ss_dssp HHHHHHHHHHHHHTTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGG-GGCTTCCEEECCSSCCCC-CG
T ss_pred hhhhcccccccCccCceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhh-hcCCCCCEEECCCCCCCC-Cc
Confidence 0000 1247788888888884 676 888888888888888888 888754 788888888888888885 66
Q ss_pred cchhhhhccccEEEeccCcCcCCC-CCcCCCCCCccEEEccCCcCcccCCCC
Q 005226 208 NDLGELQSLSATLNLSYNHLSGKI-PKSLGNLPVTVSFDLRGNNLSGEIPQT 258 (707)
Q Consensus 208 ~~~~~l~~L~~~L~l~~N~l~~~~-p~~~~~l~~L~~l~l~~N~l~~~~p~~ 258 (707)
.++++++| +.|+|++|+|++.. |..+..+++|+.|+|++|+|++.+|..
T Consensus 503 -~l~~l~~L-~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~ 552 (567)
T 1dce_A 503 -GVANLPRL-QELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQ 552 (567)
T ss_dssp -GGTTCSSC-CEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCT
T ss_pred -ccCCCCCC-cEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHH
Confidence 78888888 78888888888766 888888888888888888888877643
No 365
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.73 E-value=1.1e-17 Score=161.51 Aligned_cols=126 Identities=28% Similarity=0.343 Sum_probs=104.6
Q ss_pred EEcCCCCccccCCCCcCCCCCCCEEEcccCCcCCCCCccccCCCCCceEEecCccCCCCCCcccCCCCCccEEeccCCcc
Q 005226 74 VAISGKNVRGYIPSELGSLIYLRRLNLHNNNLFGSLPDQLFNATSLHSIFLYGNNLSGSLPPSVCNLPRLQNLDLSNNSF 153 (707)
Q Consensus 74 L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 153 (707)
+++++|+++ .+|..+. ++|++|+|++|+|+ .+|..|.++++|++|+|++|+|++..+..|.++++|+.|+|++|+|
T Consensus 15 l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l 90 (193)
T 2wfh_A 15 VRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRL 90 (193)
T ss_dssp EECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred EEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCcc
Confidence 455667777 4565543 58999999999998 7788899999999999999999988788899999999999999999
Q ss_pred cccCCCCCcccchhhhhhhcCCcccccCCCcccccCCCccEEeccCCCCCC
Q 005226 154 SGSLPDGLKNCKQLQRLILARNKFSGQIPAGIWPELENLVQLDLSDNDFKG 204 (707)
Q Consensus 154 ~~~~p~~~~~l~~L~~L~l~~N~l~~~lp~~~~~~l~~L~~L~ls~N~l~~ 204 (707)
++..|..|.++++|+.|+|++|+|+ .+|...|..+++|+.|+|++|.+..
T Consensus 91 ~~i~~~~f~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 91 RCIPPRTFDGLKSLRLLSLHGNDIS-VVPEGAFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp CBCCTTTTTTCTTCCEEECCSSCCC-BCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred CEeCHHHhCCCCCCCEEECCCCCCC-eeChhhhhcCccccEEEeCCCCeec
Confidence 9777778888888888888888888 7777777778888888888887763
No 366
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.73 E-value=1.1e-17 Score=189.73 Aligned_cols=183 Identities=26% Similarity=0.358 Sum_probs=118.4
Q ss_pred CcEEEEEcCCCCccccCCCCcCCCCCCCEEEcccCCcCCCCCccccCCCCCceEEecCccCCCCCCcccCCCCCccEEec
Q 005226 69 PRVVGVAISGKNVRGYIPSELGSLIYLRRLNLHNNNLFGSLPDQLFNATSLHSIFLYGNNLSGSLPPSVCNLPRLQNLDL 148 (707)
Q Consensus 69 ~~v~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 148 (707)
++++.|+|++|+|++ +|. .+++|++|+|++|+|++ +|. .+++|+.|+|++|+|+ .+|.. +++|++|+|
T Consensus 81 ~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-l~~---~l~~L~~L~L~~N~l~-~lp~~---l~~L~~L~L 148 (622)
T 3g06_A 81 PELRTLEVSGNQLTS-LPV---LPPGLLELSIFSNPLTH-LPA---LPSGLCKLWIFGNQLT-SLPVL---PPGLQELSV 148 (622)
T ss_dssp TTCCEEEECSCCCSC-CCC---CCTTCCEEEECSCCCCC-CCC---CCTTCCEEECCSSCCS-CCCCC---CTTCCEEEC
T ss_pred CCCCEEEcCCCcCCc-CCC---CCCCCCEEECcCCcCCC-CCC---CCCCcCEEECCCCCCC-cCCCC---CCCCCEEEC
Confidence 678888888888885 444 66778888888888774 343 3455556666666555 24432 245555555
Q ss_pred cCCcccccCCCC---Cccc--------------chhhhhhhcCCcccccCCCcc----------------cccCCCccEE
Q 005226 149 SNNSFSGSLPDG---LKNC--------------KQLQRLILARNKFSGQIPAGI----------------WPELENLVQL 195 (707)
Q Consensus 149 s~N~l~~~~p~~---~~~l--------------~~L~~L~l~~N~l~~~lp~~~----------------~~~l~~L~~L 195 (707)
++|+|++ +|.. +..| ++|+.|+|++|+|+ .+|... ...+++|+.|
T Consensus 149 s~N~l~~-l~~~~~~L~~L~L~~N~l~~l~~~~~~L~~L~Ls~N~l~-~l~~~~~~L~~L~L~~N~l~~l~~~~~~L~~L 226 (622)
T 3g06_A 149 SDNQLAS-LPALPSELCKLWAYNNQLTSLPMLPSGLQELSVSDNQLA-SLPTLPSELYKLWAYNNRLTSLPALPSGLKEL 226 (622)
T ss_dssp CSSCCSC-CCCCCTTCCEEECCSSCCSCCCCCCTTCCEEECCSSCCS-CCCCCCTTCCEEECCSSCCSSCCCCCTTCCEE
T ss_pred cCCcCCC-cCCccCCCCEEECCCCCCCCCcccCCCCcEEECCCCCCC-CCCCccchhhEEECcCCcccccCCCCCCCCEE
Confidence 5555542 2222 2122 55566666666665 343211 0123778889
Q ss_pred eccCCCCCCCCCcchhhhhccccEEEeccCcCcCCCCCcCCCCCCccEEEccCCcCcccCCCCCCCCCCCCcccCCCCc
Q 005226 196 DLSDNDFKGPIPNDLGELQSLSATLNLSYNHLSGKIPKSLGNLPVTVSFDLRGNNLSGEIPQTGSFANQGPTAFLSNPL 274 (707)
Q Consensus 196 ~ls~N~l~~~~p~~~~~l~~L~~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~~~~~~~~~~~~N~~ 274 (707)
+|++|+|++ +| ..+++| +.|+|++|+|+ .+|. .+++|+.|++++|+|+..++....+.++..+.+.+|++
T Consensus 227 ~Ls~N~L~~-lp---~~l~~L-~~L~Ls~N~L~-~lp~---~~~~L~~L~Ls~N~L~~lp~~l~~l~~L~~L~L~~N~l 296 (622)
T 3g06_A 227 IVSGNRLTS-LP---VLPSEL-KELMVSGNRLT-SLPM---LPSGLLSLSVYRNQLTRLPESLIHLSSETTVNLEGNPL 296 (622)
T ss_dssp ECCSSCCSC-CC---CCCTTC-CEEECCSSCCS-CCCC---CCTTCCEEECCSSCCCSCCGGGGGSCTTCEEECCSCCC
T ss_pred EccCCccCc-CC---CCCCcC-cEEECCCCCCC-cCCc---ccccCcEEeCCCCCCCcCCHHHhhccccCEEEecCCCC
Confidence 999998885 66 345677 79999999999 5676 57889999999999994444445566777778888875
No 367
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.73 E-value=2.6e-18 Score=162.16 Aligned_cols=132 Identities=23% Similarity=0.265 Sum_probs=81.0
Q ss_pred CcEEEEEcCCCCcc-ccCCCCcCCCCCCCEEEcccCCcCCCCCccccCCCCCceEEecCccCCCCCCcccCCCCCccEEe
Q 005226 69 PRVVGVAISGKNVR-GYIPSELGSLIYLRRLNLHNNNLFGSLPDQLFNATSLHSIFLYGNNLSGSLPPSVCNLPRLQNLD 147 (707)
Q Consensus 69 ~~v~~L~L~~n~l~-~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 147 (707)
++++.|+|++|+++ +.+|..+..+++|++|+|++|.|++. ..+..+++|++|+|++|++++.+|..+..+++|+.|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 56777777777776 56666667777777777777777654 5566677777777777777655666666667777777
Q ss_pred ccCCcccccC-CCCCcccchhhhhhhcCCcccccCCC---cccccCCCccEEeccCCCCC
Q 005226 148 LSNNSFSGSL-PDGLKNCKQLQRLILARNKFSGQIPA---GIWPELENLVQLDLSDNDFK 203 (707)
Q Consensus 148 Ls~N~l~~~~-p~~~~~l~~L~~L~l~~N~l~~~lp~---~~~~~l~~L~~L~ls~N~l~ 203 (707)
|++|+|++.. +..+..+++|+.|+|++|+++ .+|. ..+..+++|++|++++|.+.
T Consensus 102 Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~-~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 102 LSGNKLKDISTLEPLKKLECLKSLDLFNCEVT-NLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp CBSSSCCSSGGGGGGSSCSCCCEEECCSSGGG-TSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred ccCCccCcchhHHHHhcCCCCCEEEeeCCcCc-chHHHHHHHHHhCccCcEecCCCCChh
Confidence 7777666321 145555555555555555555 3443 33445555555555555554
No 368
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.73 E-value=7.8e-18 Score=178.81 Aligned_cols=196 Identities=20% Similarity=0.130 Sum_probs=159.0
Q ss_pred EEEcCCCCccccCCCCcCCCCCCCEEEcccCCcCCCCCccccCCCCCceEEecCccCCCCCC-cccCCCCCccE-EeccC
Q 005226 73 GVAISGKNVRGYIPSELGSLIYLRRLNLHNNNLFGSLPDQLFNATSLHSIFLYGNNLSGSLP-PSVCNLPRLQN-LDLSN 150 (707)
Q Consensus 73 ~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~-L~Ls~ 150 (707)
.++.++++|+ .+|..+ .++|++|+|++|+|+.+.+..|.++++|++|+|++|++.+.+| ..|.++++|+. +++++
T Consensus 13 ~v~C~~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~ 89 (350)
T 4ay9_X 13 VFLCQESKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKA 89 (350)
T ss_dssp EEEEESTTCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEE
T ss_pred EEEecCCCCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccC
Confidence 4788999999 557666 3689999999999996666789999999999999999976666 46889998775 67788
Q ss_pred CcccccCCCCCcccchhhhhhhcCCcccccCCCcccccCCCccEEeccC-CCCCCCCCcchhhhhccccEEEeccCcCcC
Q 005226 151 NSFSGSLPDGLKNCKQLQRLILARNKFSGQIPAGIWPELENLVQLDLSD-NDFKGPIPNDLGELQSLSATLNLSYNHLSG 229 (707)
Q Consensus 151 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~lp~~~~~~l~~L~~L~ls~-N~l~~~~p~~~~~l~~L~~~L~l~~N~l~~ 229 (707)
|+|+...|..|.++++|++|++++|+|+ .+|...+....++..|++.+ |++....+..|..+...++.|+|++|+|+
T Consensus 90 N~l~~l~~~~f~~l~~L~~L~l~~n~l~-~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~- 167 (350)
T 4ay9_X 90 NNLLYINPEAFQNLPNLQYLLISNTGIK-HLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQ- 167 (350)
T ss_dssp TTCCEECTTSBCCCTTCCEEEEEEECCS-SCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCC-
T ss_pred CcccccCchhhhhccccccccccccccc-cCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhcccccccc-
Confidence 9999888899999999999999999999 78877777788899999966 67875556677777654379999999999
Q ss_pred CCCCcCCCCCCccEEEccCCcCcccCCC--CCCCCCCCCcccCCCC
Q 005226 230 KIPKSLGNLPVTVSFDLRGNNLSGEIPQ--TGSFANQGPTAFLSNP 273 (707)
Q Consensus 230 ~~p~~~~~l~~L~~l~l~~N~l~~~~p~--~~~~~~~~~~~~~~N~ 273 (707)
.+|.......+|+.|++++|+..+.+|. ...+.++..+.+.+|.
T Consensus 168 ~i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~ 213 (350)
T 4ay9_X 168 EIHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTR 213 (350)
T ss_dssp EECTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSC
T ss_pred CCChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCC
Confidence 5666666778999999986444445553 2456778888888875
No 369
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.73 E-value=6.8e-20 Score=195.73 Aligned_cols=203 Identities=22% Similarity=0.223 Sum_probs=144.8
Q ss_pred CcEEEEEcCCCCccccCC----CCcCCCC-CCCEEEcccCCcCCCCCccccCC-----CCCceEEecCccCCCCCCcccC
Q 005226 69 PRVVGVAISGKNVRGYIP----SELGSLI-YLRRLNLHNNNLFGSLPDQLFNA-----TSLHSIFLYGNNLSGSLPPSVC 138 (707)
Q Consensus 69 ~~v~~L~L~~n~l~~~~~----~~l~~l~-~L~~L~L~~N~l~~~~p~~~~~l-----~~L~~L~L~~N~l~~~~p~~~~ 138 (707)
.+++.|+|++|++++..+ ..|..++ +|++|+|++|+|++..+..+..+ ++|++|+|++|+|++..+..+.
T Consensus 22 ~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~ 101 (362)
T 3goz_A 22 HGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELV 101 (362)
T ss_dssp TTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHH
T ss_pred CCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHHH
Confidence 458889999998887766 6777888 89999999998887777777765 8899999999998866666443
Q ss_pred ----CC-CCccEEeccCCcccccCCCCCcc-----cchhhhhhhcCCcccccCCCcc---cccCC-CccEEeccCCCCCC
Q 005226 139 ----NL-PRLQNLDLSNNSFSGSLPDGLKN-----CKQLQRLILARNKFSGQIPAGI---WPELE-NLVQLDLSDNDFKG 204 (707)
Q Consensus 139 ----~l-~~L~~L~Ls~N~l~~~~p~~~~~-----l~~L~~L~l~~N~l~~~lp~~~---~~~l~-~L~~L~ls~N~l~~ 204 (707)
.+ ++|+.|+|++|+|++..+..+.. .++|++|+|++|+|++.-...+ +..++ +|++|+|++|+|++
T Consensus 102 ~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~ 181 (362)
T 3goz_A 102 KTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLAS 181 (362)
T ss_dssp HHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGG
T ss_pred HHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCCch
Confidence 34 78999999999988655544433 2588889999998873222211 23444 88899999998887
Q ss_pred CCCcchhhh-----hccccEEEeccCcCcCC----CCCcCCC-CCCccEEEccCCcCcccCCC-----CCCCCCCCCccc
Q 005226 205 PIPNDLGEL-----QSLSATLNLSYNHLSGK----IPKSLGN-LPVTVSFDLRGNNLSGEIPQ-----TGSFANQGPTAF 269 (707)
Q Consensus 205 ~~p~~~~~l-----~~L~~~L~l~~N~l~~~----~p~~~~~-l~~L~~l~l~~N~l~~~~p~-----~~~~~~~~~~~~ 269 (707)
..+..+... ++| ++|+|++|.|+.. ++..+.. .++|+.|++++|++++..+. ...+.++..+.+
T Consensus 182 ~~~~~l~~~l~~~~~~L-~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~~~~l~~L~~L~L 260 (362)
T 3goz_A 182 KNCAELAKFLASIPASV-TSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYL 260 (362)
T ss_dssp SCHHHHHHHHHTSCTTC-CEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCCCHHHHHHTTTTTTTCSEEEE
T ss_pred hhHHHHHHHHHhCCCCC-CEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcHHHHHHHHHHhcCCCccEEEe
Confidence 777666554 578 7899999988852 4445544 35888899999888764331 123344555555
Q ss_pred CCC
Q 005226 270 LSN 272 (707)
Q Consensus 270 ~~N 272 (707)
.+|
T Consensus 261 ~~n 263 (362)
T 3goz_A 261 DYD 263 (362)
T ss_dssp EHH
T ss_pred ccC
Confidence 554
No 370
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.73 E-value=3.8e-18 Score=161.00 Aligned_cols=133 Identities=24% Similarity=0.221 Sum_probs=81.9
Q ss_pred CCCCCEEEcccCCcC-CCCCccccCCCCCceEEecCccCCCCCCcccCCCCCccEEeccCCcccccCCCCCcccchhhhh
Q 005226 92 LIYLRRLNLHNNNLF-GSLPDQLFNATSLHSIFLYGNNLSGSLPPSVCNLPRLQNLDLSNNSFSGSLPDGLKNCKQLQRL 170 (707)
Q Consensus 92 l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 170 (707)
.++|++|+|++|+|+ +.+|..+..+++|++|+|++|.|++. ..+..+++|+.|+|++|++++.+|..+.++++|+.|
T Consensus 23 ~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 100 (168)
T 2ell_A 23 PAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHL 100 (168)
T ss_dssp TTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEE
T ss_pred cccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEE
Confidence 367788888888877 66777777777888888888877744 667777777777777777775555555555555555
Q ss_pred hhcCCcccccCCC-cccccCCCccEEeccCCCCCCCCC---cchhhhhccccEEEeccCcCc
Q 005226 171 ILARNKFSGQIPA-GIWPELENLVQLDLSDNDFKGPIP---NDLGELQSLSATLNLSYNHLS 228 (707)
Q Consensus 171 ~l~~N~l~~~lp~-~~~~~l~~L~~L~ls~N~l~~~~p---~~~~~l~~L~~~L~l~~N~l~ 228 (707)
+|++|+|+ .+|. ..+..+++|++|+|++|++++..+ ..+..+++| +.|++++|.+.
T Consensus 101 ~Ls~N~l~-~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L-~~L~l~~n~~~ 160 (168)
T 2ell_A 101 NLSGNKLK-DISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQL-TYLDGYDREDQ 160 (168)
T ss_dssp ECBSSSCC-SSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSC-CEETTEETTSC
T ss_pred eccCCccC-cchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccC-cEecCCCCChh
Confidence 55555555 3332 233455555555555555553322 244444444 44555555444
No 371
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.72 E-value=1.1e-18 Score=177.49 Aligned_cols=170 Identities=22% Similarity=0.267 Sum_probs=146.7
Q ss_pred CCCCCCEEEcccCCcCCCCCccccCCCCCceEEecCccCCCCCCcccCCCCCccEEeccCCcccccCCCCCcccchhhhh
Q 005226 91 SLIYLRRLNLHNNNLFGSLPDQLFNATSLHSIFLYGNNLSGSLPPSVCNLPRLQNLDLSNNSFSGSLPDGLKNCKQLQRL 170 (707)
Q Consensus 91 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 170 (707)
.+.++..++|++|.+++. + .+..+++|++|+|++|+|+ .+| .+..+++|+.|+|++|+|++..| +.++++|+.|
T Consensus 17 ~l~~l~~l~l~~~~i~~~-~-~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L 90 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVTDL-V-SQKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEEL 90 (263)
T ss_dssp HHHHHHHHHHTCSCTTSE-E-CHHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEE
T ss_pred HHHHHHHHHhcCCCcccc-c-chhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEE
Confidence 566788899999999844 4 6889999999999999999 566 78999999999999999996544 9999999999
Q ss_pred hhcCCcccccCCCcccccCCCccEEeccCCCCCCCCCcchhhhhccccEEEeccCcCcCCCCCcCCCCCCccEEEccCCc
Q 005226 171 ILARNKFSGQIPAGIWPELENLVQLDLSDNDFKGPIPNDLGELQSLSATLNLSYNHLSGKIPKSLGNLPVTVSFDLRGNN 250 (707)
Q Consensus 171 ~l~~N~l~~~lp~~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~ 250 (707)
+|++|+|+ .+|... . ++|++|+|++|+|++ ++ .+..+++| +.|+|++|+|++ +| .+..+++|+.|++++|+
T Consensus 91 ~L~~N~l~-~l~~~~--~-~~L~~L~L~~N~l~~-~~-~l~~l~~L-~~L~Ls~N~i~~-~~-~l~~l~~L~~L~L~~N~ 161 (263)
T 1xeu_A 91 SVNRNRLK-NLNGIP--S-ACLSRLFLDNNELRD-TD-SLIHLKNL-EILSIRNNKLKS-IV-MLGFLSKLEVLDLHGNE 161 (263)
T ss_dssp ECCSSCCS-CCTTCC--C-SSCCEEECCSSCCSB-SG-GGTTCTTC-CEEECTTSCCCB-CG-GGGGCTTCCEEECTTSC
T ss_pred ECCCCccC-CcCccc--c-CcccEEEccCCccCC-Ch-hhcCcccc-cEEECCCCcCCC-Ch-HHccCCCCCEEECCCCc
Confidence 99999999 677643 3 999999999999995 44 69999999 899999999996 45 68899999999999999
Q ss_pred CcccCCCCCCCCCCCCcccCCCCccc
Q 005226 251 LSGEIPQTGSFANQGPTAFLSNPLLC 276 (707)
Q Consensus 251 l~~~~p~~~~~~~~~~~~~~~N~~l~ 276 (707)
+++. +....+.++..+.+.+|+..+
T Consensus 162 i~~~-~~l~~l~~L~~L~l~~N~~~~ 186 (263)
T 1xeu_A 162 ITNT-GGLTRLKKVNWIDLTGQKCVN 186 (263)
T ss_dssp CCBC-TTSTTCCCCCEEEEEEEEEEC
T ss_pred Ccch-HHhccCCCCCEEeCCCCcccC
Confidence 9987 666677778888888887544
No 372
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.71 E-value=1.6e-19 Score=192.89 Aligned_cols=199 Identities=22% Similarity=0.213 Sum_probs=157.1
Q ss_pred EEEcCCCCccccCCCCcCCCCCCCEEEcccCCcCCCCC----ccccCCC-CCceEEecCccCCCCCCcccCCC-----CC
Q 005226 73 GVAISGKNVRGYIPSELGSLIYLRRLNLHNNNLFGSLP----DQLFNAT-SLHSIFLYGNNLSGSLPPSVCNL-----PR 142 (707)
Q Consensus 73 ~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p----~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l-----~~ 142 (707)
.+.|++|+++|.+|..+...++|++|+|++|.|++..+ ..|.+++ +|++|+|++|+|++..+..|..+ ++
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 46899999999999888888889999999999997776 7788898 99999999999998878877775 99
Q ss_pred ccEEeccCCcccccCCCCCccc-----chhhhhhhcCCcccccCCCccc----cc-CCCccEEeccCCCCCCCCCcch--
Q 005226 143 LQNLDLSNNSFSGSLPDGLKNC-----KQLQRLILARNKFSGQIPAGIW----PE-LENLVQLDLSDNDFKGPIPNDL-- 210 (707)
Q Consensus 143 L~~L~Ls~N~l~~~~p~~~~~l-----~~L~~L~l~~N~l~~~lp~~~~----~~-l~~L~~L~ls~N~l~~~~p~~~-- 210 (707)
|++|+|++|++++..+..+... ++|+.|+|++|+|+ ..+...+ .. .++|++|+|++|+|++..+..+
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~-~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~ 160 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFS-SKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQ 160 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGG-GSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHH
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCC-cHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHH
Confidence 9999999999997776655544 89999999999998 5554332 23 3699999999999996555444
Q ss_pred --hhhh-ccccEEEeccCcCcCCCCCcCC----CC-CCccEEEccCCcCccc----CCC-CCC-CCCCCCcccCCCC
Q 005226 211 --GELQ-SLSATLNLSYNHLSGKIPKSLG----NL-PVTVSFDLRGNNLSGE----IPQ-TGS-FANQGPTAFLSNP 273 (707)
Q Consensus 211 --~~l~-~L~~~L~l~~N~l~~~~p~~~~----~l-~~L~~l~l~~N~l~~~----~p~-~~~-~~~~~~~~~~~N~ 273 (707)
..++ +| ++|+|++|+|++..+..+. .+ ++|+.|+|++|.+++. ++. ... ..++..+.+.+|.
T Consensus 161 ~l~~~~~~L-~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~ 236 (362)
T 3goz_A 161 ILAAIPANV-NSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNC 236 (362)
T ss_dssp HHHTSCTTC-CEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSC
T ss_pred HHhcCCccc-cEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCC
Confidence 4444 78 8999999999977665443 44 6999999999999862 221 111 1356666666664
No 373
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.70 E-value=1.6e-18 Score=201.19 Aligned_cols=175 Identities=22% Similarity=0.214 Sum_probs=125.8
Q ss_pred CcEEEEEcCCCCccccCCCCcCCCCCCCEEEcccCCcCCCCCccccCCCCCceEEecCccCCCCCCcccCCCCCccEEec
Q 005226 69 PRVVGVAISGKNVRGYIPSELGSLIYLRRLNLHNNNLFGSLPDQLFNATSLHSIFLYGNNLSGSLPPSVCNLPRLQNLDL 148 (707)
Q Consensus 69 ~~v~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 148 (707)
..++.|+|++|.+. .+|..+.++++|++|+|++|.|+ .+|..|.+|++|++|+|++|+|+ .+|..|++|++|+.|+|
T Consensus 224 ~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L 300 (727)
T 4b8c_D 224 QLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYF 300 (727)
T ss_dssp CCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEEC
T ss_pred CCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEEC
Confidence 67999999999999 67888889999999999999999 89999999999999999999999 88999999999999999
Q ss_pred cCCcccccCCCCCcccchhhhhhhcCCcccccCCCcccccCCCccEEeccCCCCCCCCCcchhhhhccccEEEeccC---
Q 005226 149 SNNSFSGSLPDGLKNCKQLQRLILARNKFSGQIPAGIWPELENLVQLDLSDNDFKGPIPNDLGELQSLSATLNLSYN--- 225 (707)
Q Consensus 149 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~lp~~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~L~l~~N--- 225 (707)
++|.|+ .+|..|.+|++|+.|+|++|+|+|.+|..+......+..|+|++|.+++.+|..+. .|++++|
T Consensus 301 ~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~l~-------~l~l~~n~~~ 372 (727)
T 4b8c_D 301 FDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHERR-------FIEINTDGEP 372 (727)
T ss_dssp CSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC-------------------
T ss_pred CCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCccccc-------eeEeeccccc
Confidence 999998 88999999999999999999999777765432212334589999999999997653 5566666
Q ss_pred -----cCcCCCCCcCCCCCCccEEEccCCcCccc
Q 005226 226 -----HLSGKIPKSLGNLPVTVSFDLRGNNLSGE 254 (707)
Q Consensus 226 -----~l~~~~p~~~~~l~~L~~l~l~~N~l~~~ 254 (707)
.|.+..+..+..+..+....+++|-+.+.
T Consensus 373 ~~~~~~l~~~~~~~~~~l~~~~~~~ls~Nil~~~ 406 (727)
T 4b8c_D 373 QREYDSLQQSTEHLATDLAKRTFTVLSYNTLCQH 406 (727)
T ss_dssp -----------------------------CCCGG
T ss_pred ccccCCccccccchhhcccccceeeeeccccccc
Confidence 44444455555666666677777766543
No 374
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.70 E-value=4.6e-17 Score=157.24 Aligned_cols=128 Identities=25% Similarity=0.347 Sum_probs=79.9
Q ss_pred CEEEcccCCcCCCCCccccCCCCCceEEecCccCCCCCCcccCCCCCccEEeccCCcccccCCCCCcccchhhhhhhcCC
Q 005226 96 RRLNLHNNNLFGSLPDQLFNATSLHSIFLYGNNLSGSLPPSVCNLPRLQNLDLSNNSFSGSLPDGLKNCKQLQRLILARN 175 (707)
Q Consensus 96 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N 175 (707)
+.+++++|+|+ .+|..+. ++|++|+|++|+|+ .+|..|.++++|+.|+|++|+|++
T Consensus 13 ~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~-------------------- 68 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRIST-------------------- 68 (193)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCC--------------------
T ss_pred CEEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCE--------------------
Confidence 46777777777 5555443 46667777777766 566666666666666666666664
Q ss_pred cccccCCCcccccCCCccEEeccCCCCCCCCCcchhhhhccccEEEeccCcCcCCCCCcCCCCCCccEEEccCCcCcc
Q 005226 176 KFSGQIPAGIWPELENLVQLDLSDNDFKGPIPNDLGELQSLSATLNLSYNHLSGKIPKSLGNLPVTVSFDLRGNNLSG 253 (707)
Q Consensus 176 ~l~~~lp~~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~ 253 (707)
++...|..+++|++|+|++|+|++..|..|.++++| +.|+|++|+|++..+..|..+++|+.|++++|++.+
T Consensus 69 -----i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L-~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 69 -----LSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSL-RLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp -----CCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTC-CEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred -----eCHhHccCCCCCCEEECCCCccCEeCHHHhCCCCCC-CEEECCCCCCCeeChhhhhcCccccEEEeCCCCeec
Confidence 444444555555556666666655555556666666 566666666665444556667777777777776653
No 375
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.70 E-value=7.4e-18 Score=155.59 Aligned_cols=127 Identities=22% Similarity=0.230 Sum_probs=93.6
Q ss_pred CcEEEEEcCCCCcc-ccCCCCcCCCCCCCEEEcccCCcCCCCCccccCCCCCceEEecCccCCCCCCcccCCCCCccEEe
Q 005226 69 PRVVGVAISGKNVR-GYIPSELGSLIYLRRLNLHNNNLFGSLPDQLFNATSLHSIFLYGNNLSGSLPPSVCNLPRLQNLD 147 (707)
Q Consensus 69 ~~v~~L~L~~n~l~-~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 147 (707)
++++.|++++|+++ +.+|..+..+++|++|+|++|.|++. ..+.++++|++|+|++|+|++.+|..+..+++|+.|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 57888888888887 67777788888888888888888765 6677888888888888888866777777788888888
Q ss_pred ccCCccccc-CCCCCcccchhhhhhhcCCcccccCCC---cccccCCCccEEecc
Q 005226 148 LSNNSFSGS-LPDGLKNCKQLQRLILARNKFSGQIPA---GIWPELENLVQLDLS 198 (707)
Q Consensus 148 Ls~N~l~~~-~p~~~~~l~~L~~L~l~~N~l~~~lp~---~~~~~l~~L~~L~ls 198 (707)
|++|++++. .+..+.++++|+.|++++|+++ .+|. ..+..+++|+.|+++
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~-~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNCEVT-NLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCCEEECTTCGGG-GSTTHHHHHHHHCTTCCEETTB
T ss_pred CCCCcCCChHHHHHHhhCCCCCEEeCcCCccc-chHHHHHHHHHHCCCcccccCC
Confidence 888888742 2366666677777777777766 4444 445566666666665
No 376
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.69 E-value=7.9e-17 Score=153.31 Aligned_cols=132 Identities=23% Similarity=0.294 Sum_probs=80.3
Q ss_pred CEEEcccCCcCCCCCccccCCCCCceEEecCccCCCCCCcccCCCCCccEEeccCCcccccCCCCCcccchhhhhhhcCC
Q 005226 96 RRLNLHNNNLFGSLPDQLFNATSLHSIFLYGNNLSGSLPPSVCNLPRLQNLDLSNNSFSGSLPDGLKNCKQLQRLILARN 175 (707)
Q Consensus 96 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N 175 (707)
+.+++++|+++ .+|..+ .++|++|+|++|+|++..+..|..+++|++|+|++|+|+
T Consensus 10 ~~l~~~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~--------------------- 65 (177)
T 2o6r_A 10 TEIRCNSKGLT-SVPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQ--------------------- 65 (177)
T ss_dssp TEEECCSSCCS-SCCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCC---------------------
T ss_pred CEEEecCCCCc-cCCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcce---------------------
Confidence 45666666655 334322 245555555555555444444455555555555555554
Q ss_pred cccccCCCcccccCCCccEEeccCCCCCCCCCcchhhhhccccEEEeccCcCcCCCCCcCCCCCCccEEEccCCcCcccC
Q 005226 176 KFSGQIPAGIWPELENLVQLDLSDNDFKGPIPNDLGELQSLSATLNLSYNHLSGKIPKSLGNLPVTVSFDLRGNNLSGEI 255 (707)
Q Consensus 176 ~l~~~lp~~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~ 255 (707)
.+|...|..+++|++|+|++|+|++..+..+.++++| ++|+|++|+|++..+..+..+++|+.|++++|++++..
T Consensus 66 ----~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L-~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~ 140 (177)
T 2o6r_A 66 ----SLPDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQL-KELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 140 (177)
T ss_dssp ----CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTC-CEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCH
T ss_pred ----EeChhHccCCCccCEEECCCCCccccCHHHhhCCccc-CEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccC
Confidence 4555555666667777777777765555556667777 67777777777555555677777788888888777665
Q ss_pred C
Q 005226 256 P 256 (707)
Q Consensus 256 p 256 (707)
|
T Consensus 141 ~ 141 (177)
T 2o6r_A 141 P 141 (177)
T ss_dssp H
T ss_pred c
Confidence 5
No 377
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.67 E-value=1.8e-17 Score=152.96 Aligned_cols=127 Identities=24% Similarity=0.249 Sum_probs=71.3
Q ss_pred CCCCEEEcccCCcC-CCCCccccCCCCCceEEecCccCCCCCCcccCCCCCccEEeccCCcccccCCCCCcccchhhhhh
Q 005226 93 IYLRRLNLHNNNLF-GSLPDQLFNATSLHSIFLYGNNLSGSLPPSVCNLPRLQNLDLSNNSFSGSLPDGLKNCKQLQRLI 171 (707)
Q Consensus 93 ~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 171 (707)
++|++|+|++|.++ +.+|..+..+++|++|+|++|+|++. ..+..+++|+.|+|++|++++.+|..+.+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~-------- 86 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEK-------- 86 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHH--------
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhh--------
Confidence 55666666666666 56666666666666666666666643 55666666666666666666444444444
Q ss_pred hcCCcccccCCCcccccCCCccEEeccCCCCCCC-CCcchhhhhccccEEEeccCcCcCCCC---CcCCCCCCccEEEcc
Q 005226 172 LARNKFSGQIPAGIWPELENLVQLDLSDNDFKGP-IPNDLGELQSLSATLNLSYNHLSGKIP---KSLGNLPVTVSFDLR 247 (707)
Q Consensus 172 l~~N~l~~~lp~~~~~~l~~L~~L~ls~N~l~~~-~p~~~~~l~~L~~~L~l~~N~l~~~~p---~~~~~l~~L~~l~l~ 247 (707)
+++|++|++++|+|++. .+..+..+++| ++|++++|.+++..+ ..+..+++|+.|+++
T Consensus 87 -----------------l~~L~~L~ls~N~i~~~~~~~~~~~l~~L-~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 87 -----------------CPNLTHLNLSGNKIKDLSTIEPLKKLENL-KSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp -----------------CTTCCEEECTTSCCCSHHHHGGGGGCTTC-CEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred -----------------CCCCCEEECCCCcCCChHHHHHHhhCCCC-CEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 45555555555555431 22445555555 455555555553332 245555555555554
No 378
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.65 E-value=4.1e-19 Score=199.96 Aligned_cols=177 Identities=20% Similarity=0.180 Sum_probs=149.4
Q ss_pred cCCCCCCCEEEcccCCcCCCCCccccCCCCCceEEecCcc-------------CCCCCCcccCCCCCccEEe-ccCCccc
Q 005226 89 LGSLIYLRRLNLHNNNLFGSLPDQLFNATSLHSIFLYGNN-------------LSGSLPPSVCNLPRLQNLD-LSNNSFS 154 (707)
Q Consensus 89 l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~-------------l~~~~p~~~~~l~~L~~L~-Ls~N~l~ 154 (707)
+..+++|+.|+|++|+|+ .+|.++.++++|+.|++++|. +.+.+|..++.+++|+.|+ ++.|.+.
T Consensus 345 ~~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~ 423 (567)
T 1dce_A 345 SATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLD 423 (567)
T ss_dssp CSTTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHH
T ss_pred cccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccc
Confidence 367899999999999998 889999999999999998886 6678888899999999999 6766544
Q ss_pred ccCCC------CCccc--chhhhhhhcCCcccccCCCcccccCCCccEEeccCCCCCCCCCcchhhhhccccEEEeccCc
Q 005226 155 GSLPD------GLKNC--KQLQRLILARNKFSGQIPAGIWPELENLVQLDLSDNDFKGPIPNDLGELQSLSATLNLSYNH 226 (707)
Q Consensus 155 ~~~p~------~~~~l--~~L~~L~l~~N~l~~~lp~~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~L~l~~N~ 226 (707)
.++. .+..+ ..|+.|+|++|+|+ .+|. +..+++|+.|+|++|+|+ .+|..|+++++| +.|+|++|+
T Consensus 424 -~L~~l~l~~n~i~~l~~~~L~~L~Ls~n~l~-~lp~--~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L-~~L~Ls~N~ 497 (567)
T 1dce_A 424 -DLRSKFLLENSVLKMEYADVRVLHLAHKDLT-VLCH--LEQLLLVTHLDLSHNRLR-ALPPALAALRCL-EVLQASDNA 497 (567)
T ss_dssp -HHHHHHHHHHHHHHHHHTTCSEEECTTSCCS-SCCC--GGGGTTCCEEECCSSCCC-CCCGGGGGCTTC-CEEECCSSC
T ss_pred -hhhhhhhhcccccccCccCceEEEecCCCCC-CCcC--ccccccCcEeecCccccc-ccchhhhcCCCC-CEEECCCCC
Confidence 1111 11111 25889999999999 6886 689999999999999999 889999999999 899999999
Q ss_pred CcCCCCCcCCCCCCccEEEccCCcCcccC-C-CCCCCCCCCCcccCCCCc
Q 005226 227 LSGKIPKSLGNLPVTVSFDLRGNNLSGEI-P-QTGSFANQGPTAFLSNPL 274 (707)
Q Consensus 227 l~~~~p~~~~~l~~L~~l~l~~N~l~~~~-p-~~~~~~~~~~~~~~~N~~ 274 (707)
|++ +| .++.+++|+.|+|++|+|++.+ | ....+.++..+.+.+|+.
T Consensus 498 l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l 545 (567)
T 1dce_A 498 LEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSL 545 (567)
T ss_dssp CCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGG
T ss_pred CCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcC
Confidence 996 78 8999999999999999999985 4 455677788888888864
No 379
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.64 E-value=9.2e-17 Score=152.75 Aligned_cols=132 Identities=21% Similarity=0.332 Sum_probs=78.3
Q ss_pred ccCCCCCceEEecCccCCCCCCcccCCC-CCccEEeccCCcccccCCCCCcccchhhhhhhcCCcccccCCCcccccCCC
Q 005226 113 LFNATSLHSIFLYGNNLSGSLPPSVCNL-PRLQNLDLSNNSFSGSLPDGLKNCKQLQRLILARNKFSGQIPAGIWPELEN 191 (707)
Q Consensus 113 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~lp~~~~~~l~~ 191 (707)
+.++.+|++|+|++|+|+ .+|. +..+ ++|+.|+|++|+|++. ..|.++++|+.|+|++|+|+ .+|..+|..+++
T Consensus 15 ~~~~~~L~~L~l~~n~l~-~i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~-~~~~~~~~~l~~ 89 (176)
T 1a9n_A 15 YTNAVRDRELDLRGYKIP-VIEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRIC-RIGEGLDQALPD 89 (176)
T ss_dssp EECTTSCEEEECTTSCCC-SCCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCC-EECSCHHHHCTT
T ss_pred cCCcCCceEEEeeCCCCc-hhHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCccc-ccCcchhhcCCC
Confidence 334444445555555444 2332 2222 2555555555555532 34555555555555555555 556555666777
Q ss_pred ccEEeccCCCCCCCCCc--chhhhhccccEEEeccCcCcCCCCCc----CCCCCCccEEEccCCcCc
Q 005226 192 LVQLDLSDNDFKGPIPN--DLGELQSLSATLNLSYNHLSGKIPKS----LGNLPVTVSFDLRGNNLS 252 (707)
Q Consensus 192 L~~L~ls~N~l~~~~p~--~~~~l~~L~~~L~l~~N~l~~~~p~~----~~~l~~L~~l~l~~N~l~ 252 (707)
|++|+|++|+|+ .+|. .+..+++| +.|++++|.++ .+|.. +..+++|+.||+++|.+.
T Consensus 90 L~~L~L~~N~i~-~~~~~~~l~~l~~L-~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 90 LTELILTNNSLV-ELGDLDPLASLKSL-TYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp CCEEECCSCCCC-CGGGGGGGGGCTTC-CEEECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHH
T ss_pred CCEEECCCCcCC-cchhhHhhhcCCCC-CEEEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHH
Confidence 777777777775 4555 67777777 67777777777 45653 677777888887777765
No 380
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.62 E-value=1.7e-16 Score=150.95 Aligned_cols=134 Identities=17% Similarity=0.159 Sum_probs=79.2
Q ss_pred CcCCCCCCCEEEcccCCcCCCCCccccCCC-CCceEEecCccCCCCCCcccCCCCCccEEeccCCcccccCCCCCcccch
Q 005226 88 ELGSLIYLRRLNLHNNNLFGSLPDQLFNAT-SLHSIFLYGNNLSGSLPPSVCNLPRLQNLDLSNNSFSGSLPDGLKNCKQ 166 (707)
Q Consensus 88 ~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 166 (707)
.+.++++|++|+|++|+|+. +|. +..+. +|++|+|++|+|++. ..|..+++|+.|+|++|+|++..+..+..+++
T Consensus 14 ~~~~~~~L~~L~l~~n~l~~-i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 89 (176)
T 1a9n_A 14 QYTNAVRDRELDLRGYKIPV-IEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPD 89 (176)
T ss_dssp EEECTTSCEEEECTTSCCCS-CCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTT
T ss_pred hcCCcCCceEEEeeCCCCch-hHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCC
Confidence 34455566666666666663 333 33333 666666666666643 45666666666666666666433333466666
Q ss_pred hhhhhhcCCcccccCCC-cccccCCCccEEeccCCCCCCCCCcc----hhhhhccccEEEeccCcCc
Q 005226 167 LQRLILARNKFSGQIPA-GIWPELENLVQLDLSDNDFKGPIPND----LGELQSLSATLNLSYNHLS 228 (707)
Q Consensus 167 L~~L~l~~N~l~~~lp~-~~~~~l~~L~~L~ls~N~l~~~~p~~----~~~l~~L~~~L~l~~N~l~ 228 (707)
|+.|+|++|+|+ .+|. ..+..+++|+.|+|++|.++ .+|.. +..+++| +.||+++|.+.
T Consensus 90 L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L-~~Ld~~~n~~~ 153 (176)
T 1a9n_A 90 LTELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQV-RVLDFQKVKLK 153 (176)
T ss_dssp CCEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTC-SEETTEECCHH
T ss_pred CCEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCcc-ceeCCCcCCHH
Confidence 666666666665 5554 23456666777777777766 44543 6666676 57777766654
No 381
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.62 E-value=9.8e-19 Score=169.87 Aligned_cols=151 Identities=21% Similarity=0.254 Sum_probs=73.5
Q ss_pred CCCCEEEcccCCcCCCCCc------cccCCCCCceEEecCccCCCCCCcccCCCCCccEEeccCCcccccCCCCCcccch
Q 005226 93 IYLRRLNLHNNNLFGSLPD------QLFNATSLHSIFLYGNNLSGSLPPSVCNLPRLQNLDLSNNSFSGSLPDGLKNCKQ 166 (707)
Q Consensus 93 ~~L~~L~L~~N~l~~~~p~------~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 166 (707)
..++.++|+.|.+++.+|. .+.++++|++|+|++|+|++ +| .+..+++|+.|+|++|+|+ .+|..+..+++
T Consensus 18 ~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~ 94 (198)
T 1ds9_A 18 KSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADT 94 (198)
T ss_dssp TCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHH
T ss_pred ccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCc
Confidence 3344444444444444443 45555555555555555553 44 4555555555555555555 34444444455
Q ss_pred hhhhhhcCCcccccCCCcccccCCCccEEeccCCCCCCCCC-cchhhhhccccEEEeccCcCcCCCCCc----------C
Q 005226 167 LQRLILARNKFSGQIPAGIWPELENLVQLDLSDNDFKGPIP-NDLGELQSLSATLNLSYNHLSGKIPKS----------L 235 (707)
Q Consensus 167 L~~L~l~~N~l~~~lp~~~~~~l~~L~~L~ls~N~l~~~~p-~~~~~l~~L~~~L~l~~N~l~~~~p~~----------~ 235 (707)
|+.|+|++|+|+ .+| .+..+++|++|+|++|+|++..+ ..+..+++| ++|++++|.+++.+|.. +
T Consensus 95 L~~L~L~~N~l~-~l~--~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L-~~L~l~~N~l~~~~~~~~~~~~~~~~~~ 170 (198)
T 1ds9_A 95 LEELWISYNQIA-SLS--GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKL-EDLLLAGNPLYNDYKENNATSEYRIEVV 170 (198)
T ss_dssp CSEEEEEEEECC-CHH--HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTC-SEEEECSCHHHHHHHTTTTHHHHHHHHH
T ss_pred CCEEECcCCcCC-cCC--ccccCCCCCEEECCCCcCCchhHHHHHhcCCCC-CEEEecCCccccccccccchHHHHHHHH
Confidence 555555555554 333 13445555555555555552111 244555555 45555555555444432 4
Q ss_pred CCCCCccEEEccCCcCc
Q 005226 236 GNLPVTVSFDLRGNNLS 252 (707)
Q Consensus 236 ~~l~~L~~l~l~~N~l~ 252 (707)
..+++|+.|| +|+++
T Consensus 171 ~~l~~L~~Ld--~~~i~ 185 (198)
T 1ds9_A 171 KRLPNLKKLD--GMPVD 185 (198)
T ss_dssp HHCSSCSEEC--CGGGT
T ss_pred HhCCCcEEEC--CcccC
Confidence 4555555554 44443
No 382
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.61 E-value=2.2e-18 Score=190.11 Aligned_cols=205 Identities=19% Similarity=0.140 Sum_probs=145.1
Q ss_pred CcEEEEEcCCCCccccCCCCcC-----CCCCCCEEEcccCCcCCC----CCccccCCCCCceEEecCccCCCCC-----C
Q 005226 69 PRVVGVAISGKNVRGYIPSELG-----SLIYLRRLNLHNNNLFGS----LPDQLFNATSLHSIFLYGNNLSGSL-----P 134 (707)
Q Consensus 69 ~~v~~L~L~~n~l~~~~~~~l~-----~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~~-----p 134 (707)
++++.|+|++|.+....+..+. .+++|++|+|++|.+++. ++..+..+++|++|+|++|+++... +
T Consensus 170 ~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~ 249 (461)
T 1z7x_W 170 PDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCP 249 (461)
T ss_dssp TTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHH
T ss_pred CCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHHHHHH
Confidence 5788999999988765444443 366899999999988864 5677778889999999999887432 2
Q ss_pred cccCCCCCccEEeccCCccccc----CCCCCcccchhhhhhhcCCcccccCC----CcccccCCCccEEeccCCCCCCC-
Q 005226 135 PSVCNLPRLQNLDLSNNSFSGS----LPDGLKNCKQLQRLILARNKFSGQIP----AGIWPELENLVQLDLSDNDFKGP- 205 (707)
Q Consensus 135 ~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~~~lp----~~~~~~l~~L~~L~ls~N~l~~~- 205 (707)
..+..+++|+.|+|++|+++.. ++..+.++++|+.|+|++|++++..+ ..+....++|++|+|++|.+++.
T Consensus 250 ~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~ 329 (461)
T 1z7x_W 250 GLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAAC 329 (461)
T ss_dssp HHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGG
T ss_pred HHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHH
Confidence 3334678899999999988854 56777778889999999988863222 12222336888888888888754
Q ss_pred ---CCcchhhhhccccEEEeccCcCcCCCCCcCCC-----CCCccEEEccCCcCcc----cCCC-CCCCCCCCCcccCCC
Q 005226 206 ---IPNDLGELQSLSATLNLSYNHLSGKIPKSLGN-----LPVTVSFDLRGNNLSG----EIPQ-TGSFANQGPTAFLSN 272 (707)
Q Consensus 206 ---~p~~~~~l~~L~~~L~l~~N~l~~~~p~~~~~-----l~~L~~l~l~~N~l~~----~~p~-~~~~~~~~~~~~~~N 272 (707)
++..+..+++| ++|+|++|.+++..+..+.. .++|+.|++++|++++ .+|. .....++..+.+.+|
T Consensus 330 ~~~l~~~l~~~~~L-~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N 408 (461)
T 1z7x_W 330 CSHFSSVLAQNRFL-LELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNN 408 (461)
T ss_dssp HHHHHHHHHHCSSC-CEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSS
T ss_pred HHHHHHHHhhCCCc-cEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCccEEECCCC
Confidence 45566677888 68888888887654444432 6688888888888875 4442 123456666777777
Q ss_pred Cc
Q 005226 273 PL 274 (707)
Q Consensus 273 ~~ 274 (707)
+.
T Consensus 409 ~i 410 (461)
T 1z7x_W 409 CL 410 (461)
T ss_dssp SC
T ss_pred CC
Confidence 53
No 383
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.61 E-value=1.3e-15 Score=160.37 Aligned_cols=135 Identities=11% Similarity=0.092 Sum_probs=97.9
Q ss_pred ccceecccCeeEEEEEEeCCCceEEEEEcCCCch--------------hhHH--------HHHHHHHHHHhcCCCceeee
Q 005226 411 SAYVLGKSGLGIVYKVVLGNGIPVAVRRLGEGGE--------------QRHR--------EFVTEVQAIAKVKHPNIVKL 468 (707)
Q Consensus 411 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~--------------~~~~--------~~~~E~~~l~~l~H~niv~l 468 (707)
....||+|+||.||+|...+|+.||||+++.... .... ...+|...|.++.+.++.-.
T Consensus 99 I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv~vp 178 (397)
T 4gyi_A 99 VGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGFPVP 178 (397)
T ss_dssp EEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTCSCC
T ss_pred ecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCCCCC
Confidence 3568999999999999999999999998653210 0001 12356777777755544222
Q ss_pred EEEEEcCCcceEEEEeecCCChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCC
Q 005226 469 RAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDF 548 (707)
Q Consensus 469 ~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~ 548 (707)
.-+.. ...++||||+++++|.++... .....++.|++.+|.|||+ .+||||||||.|||+++++
T Consensus 179 ~p~~~--~~~~LVME~i~G~~L~~l~~~-----------~~~~~l~~qll~~l~~lH~---~gIVHrDLKp~NILl~~dg 242 (397)
T 4gyi_A 179 EPIAQ--SRHTIVMSLVDALPMRQVSSV-----------PDPASLYADLIALILRLAK---HGLIHGDFNEFNILIREEK 242 (397)
T ss_dssp CEEEE--ETTEEEEECCSCEEGGGCCCC-----------SCHHHHHHHHHHHHHHHHH---TTEECSCCSTTSEEEEEEE
T ss_pred eeeec--cCceEEEEecCCccHhhhccc-----------HHHHHHHHHHHHHHHHHHH---CCCcCCCCCHHHEEEeCCC
Confidence 11111 245899999999888665421 1235688999999999999 8999999999999998876
Q ss_pred ----------CeEEecccccccc
Q 005226 549 ----------QPYISDFGLSRLI 561 (707)
Q Consensus 549 ----------~~kl~DfGla~~~ 561 (707)
.+.|+||+.+...
T Consensus 243 d~~d~~~~~~~~~iID~~Q~V~~ 265 (397)
T 4gyi_A 243 DAEDPSSITLTPIIIXFPQMVSM 265 (397)
T ss_dssp CSSCTTSEEEEEEECCCTTCEET
T ss_pred CcccccccccceEEEEeCCcccC
Confidence 3899999987543
No 384
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.61 E-value=1.1e-18 Score=169.39 Aligned_cols=151 Identities=22% Similarity=0.275 Sum_probs=130.9
Q ss_pred CcEEEEEcCCCCccccCCC------CcCCCCCCCEEEcccCCcCCCCCccccCCCCCceEEecCccCCCCCCcccCCCCC
Q 005226 69 PRVVGVAISGKNVRGYIPS------ELGSLIYLRRLNLHNNNLFGSLPDQLFNATSLHSIFLYGNNLSGSLPPSVCNLPR 142 (707)
Q Consensus 69 ~~v~~L~L~~n~l~~~~~~------~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 142 (707)
.+++.++|+++.+.|.+|. .|..+++|++|+|++|+|++ +| .+.++++|++|+|++|+|+ .+|..+..+++
T Consensus 18 ~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~ 94 (198)
T 1ds9_A 18 KSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADT 94 (198)
T ss_dssp TCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHH
T ss_pred ccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCc
Confidence 4566777778888887776 89999999999999999996 67 8999999999999999999 78888888899
Q ss_pred ccEEeccCCcccccCCCCCcccchhhhhhhcCCcccccCCC-cccccCCCccEEeccCCCCCCCCCcc----------hh
Q 005226 143 LQNLDLSNNSFSGSLPDGLKNCKQLQRLILARNKFSGQIPA-GIWPELENLVQLDLSDNDFKGPIPND----------LG 211 (707)
Q Consensus 143 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~lp~-~~~~~l~~L~~L~ls~N~l~~~~p~~----------~~ 211 (707)
|+.|+|++|++++ +| .+.++++|+.|+|++|+|+ .++. ..+..+++|++|++++|.+++.+|.. +.
T Consensus 95 L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~ 171 (198)
T 1ds9_A 95 LEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKIT-NWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVK 171 (198)
T ss_dssp CSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECC-CHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHHHHH
T ss_pred CCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCC-chhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHHHHH
Confidence 9999999999995 55 6899999999999999998 5554 45678999999999999998766653 88
Q ss_pred hhhccccEEEeccCcCc
Q 005226 212 ELQSLSATLNLSYNHLS 228 (707)
Q Consensus 212 ~l~~L~~~L~l~~N~l~ 228 (707)
.+++| +.|| +|.++
T Consensus 172 ~l~~L-~~Ld--~~~i~ 185 (198)
T 1ds9_A 172 RLPNL-KKLD--GMPVD 185 (198)
T ss_dssp HCSSC-SEEC--CGGGT
T ss_pred hCCCc-EEEC--CcccC
Confidence 89999 7776 77776
No 385
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.59 E-value=3.4e-18 Score=188.62 Aligned_cols=203 Identities=15% Similarity=0.123 Sum_probs=159.2
Q ss_pred CcEEEEEcCCCCcccc----CCCCcCCCCCCCEEEcccCCcCCCCCcccc-----CCCCCceEEecCccCCCC----CCc
Q 005226 69 PRVVGVAISGKNVRGY----IPSELGSLIYLRRLNLHNNNLFGSLPDQLF-----NATSLHSIFLYGNNLSGS----LPP 135 (707)
Q Consensus 69 ~~v~~L~L~~n~l~~~----~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~-----~l~~L~~L~L~~N~l~~~----~p~ 135 (707)
.+++.|+|++|++++. ++..+..+++|++|+|++|.++...+..+. .+++|++|+|++|+++.. ++.
T Consensus 142 ~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~ 221 (461)
T 1z7x_W 142 CRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCG 221 (461)
T ss_dssp CCCCEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHH
T ss_pred CcceEEECCCCCCCHHHHHHHHHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHH
Confidence 4799999999999974 366677889999999999998855444443 367999999999999964 577
Q ss_pred ccCCCCCccEEeccCCcccccC-----CCCCcccchhhhhhhcCCccccc----CCCcccccCCCccEEeccCCCCCCCC
Q 005226 136 SVCNLPRLQNLDLSNNSFSGSL-----PDGLKNCKQLQRLILARNKFSGQ----IPAGIWPELENLVQLDLSDNDFKGPI 206 (707)
Q Consensus 136 ~~~~l~~L~~L~Ls~N~l~~~~-----p~~~~~l~~L~~L~l~~N~l~~~----lp~~~~~~l~~L~~L~ls~N~l~~~~ 206 (707)
.+..+++|+.|+|++|+++..- +..+..+++|+.|+|++|++++. ++.. +..+++|++|+|++|.+++..
T Consensus 222 ~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~-l~~~~~L~~L~Ls~n~i~~~~ 300 (461)
T 1z7x_W 222 IVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRV-LRAKESLKELSLAGNELGDEG 300 (461)
T ss_dssp HHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHH-HHHCTTCCEEECTTCCCHHHH
T ss_pred HHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHH-HhhCCCcceEECCCCCCchHH
Confidence 8888999999999999998542 23334689999999999999832 4544 467899999999999998665
Q ss_pred Ccchhhh-----hccccEEEeccCcCcCC----CCCcCCCCCCccEEEccCCcCcccCCCC------CCCCCCCCcccCC
Q 005226 207 PNDLGEL-----QSLSATLNLSYNHLSGK----IPKSLGNLPVTVSFDLRGNNLSGEIPQT------GSFANQGPTAFLS 271 (707)
Q Consensus 207 p~~~~~l-----~~L~~~L~l~~N~l~~~----~p~~~~~l~~L~~l~l~~N~l~~~~p~~------~~~~~~~~~~~~~ 271 (707)
+..+... ++| ++|+|++|.+++. ++..+..+++|+.|++++|++++..+.. ....++..+.+.+
T Consensus 301 ~~~l~~~l~~~~~~L-~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~ 379 (461)
T 1z7x_W 301 ARLLCETLLEPGCQL-ESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLAD 379 (461)
T ss_dssp HHHHHHHHTSTTCCC-CEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTT
T ss_pred HHHHHHHhccCCccc-eeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCC
Confidence 5556554 588 8999999999965 5667778899999999999998653311 0134666777777
Q ss_pred CC
Q 005226 272 NP 273 (707)
Q Consensus 272 N~ 273 (707)
|.
T Consensus 380 n~ 381 (461)
T 1z7x_W 380 CD 381 (461)
T ss_dssp SC
T ss_pred CC
Confidence 74
No 386
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.57 E-value=6.6e-15 Score=139.46 Aligned_cols=113 Identities=23% Similarity=0.330 Sum_probs=67.0
Q ss_pred EEEcCCCCccccCCCCcCCCCCCCEEEcccCCcCCCCCccccCCCCCceEEecCccCCCCCCcccCCCCCccEEeccCCc
Q 005226 73 GVAISGKNVRGYIPSELGSLIYLRRLNLHNNNLFGSLPDQLFNATSLHSIFLYGNNLSGSLPPSVCNLPRLQNLDLSNNS 152 (707)
Q Consensus 73 ~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 152 (707)
.+++++|+++ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|..+++|+.|+|++|+
T Consensus 16 ~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~ 92 (174)
T 2r9u_A 16 LVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNH 92 (174)
T ss_dssp EEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCCc
Confidence 4666777765 4454443 566666666666665555566666666666666666664433444555555555555555
Q ss_pred ccccCCCCCcccchhhhhhhcCCcccccCCCcccccCCCccEEeccCCCCCCCCCcchhhhh
Q 005226 153 FSGSLPDGLKNCKQLQRLILARNKFSGQIPAGIWPELENLVQLDLSDNDFKGPIPNDLGELQ 214 (707)
Q Consensus 153 l~~~~p~~~~~l~~L~~L~l~~N~l~~~lp~~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~ 214 (707)
|+ .+|...|..+++|++|+|++|.+. -.+..+..+.
T Consensus 93 l~-------------------------~l~~~~~~~l~~L~~L~L~~N~~~-c~~~~~~~l~ 128 (174)
T 2r9u_A 93 LK-------------------------SIPRGAFDNLKSLTHIYLYNNPWD-CECRDIMYLR 128 (174)
T ss_dssp CC-------------------------CCCTTTTTTCTTCSEEECCSSCBC-TTBGGGHHHH
T ss_pred cc-------------------------eeCHHHhccccCCCEEEeCCCCcc-cccccHHHHH
Confidence 55 555555567777777777777776 3444444443
No 387
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.57 E-value=8e-15 Score=138.37 Aligned_cols=103 Identities=25% Similarity=0.338 Sum_probs=62.5
Q ss_pred EEcCCCCccccCCCCcCCCCCCCEEEcccCCcCCCCCccccCCCCCceEEecCccCCCCCCcccCCCCCccEEeccCCcc
Q 005226 74 VAISGKNVRGYIPSELGSLIYLRRLNLHNNNLFGSLPDQLFNATSLHSIFLYGNNLSGSLPPSVCNLPRLQNLDLSNNSF 153 (707)
Q Consensus 74 L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 153 (707)
|++++|+++. +|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|..+++|+.|+|++|+|
T Consensus 14 l~~s~n~l~~-ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l 90 (170)
T 3g39_A 14 VDCSGKSLAS-VPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQL 90 (170)
T ss_dssp EECTTSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred EEeCCCCcCc-cCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCCcc
Confidence 4455566663 454442 5666666666666665566666666666666666666644444555566666666665555
Q ss_pred cccCCCCCcccchhhhhhhcCCcccccCCCcccccCCCccEEeccCCCCCC
Q 005226 154 SGSLPDGLKNCKQLQRLILARNKFSGQIPAGIWPELENLVQLDLSDNDFKG 204 (707)
Q Consensus 154 ~~~~p~~~~~l~~L~~L~l~~N~l~~~lp~~~~~~l~~L~~L~ls~N~l~~ 204 (707)
+ .+|...|..+++|++|+|++|.++.
T Consensus 91 ~-------------------------~~~~~~~~~l~~L~~L~L~~N~~~c 116 (170)
T 3g39_A 91 K-------------------------SIPRGAFDNLKSLTHIWLLNNPWDC 116 (170)
T ss_dssp C-------------------------CCCTTTTTTCTTCCEEECCSSCBCT
T ss_pred C-------------------------EeCHHHhcCCCCCCEEEeCCCCCCC
Confidence 5 4555555666777777777777763
No 388
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.54 E-value=5.6e-15 Score=155.29 Aligned_cols=183 Identities=13% Similarity=0.082 Sum_probs=149.0
Q ss_pred CcEEEEEcCCCCcc--------------------ccCCCCcCC--------CCCCCEEEcccCCcCCCCCccccCCCCCc
Q 005226 69 PRVVGVAISGKNVR--------------------GYIPSELGS--------LIYLRRLNLHNNNLFGSLPDQLFNATSLH 120 (707)
Q Consensus 69 ~~v~~L~L~~n~l~--------------------~~~~~~l~~--------l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 120 (707)
++++.|||++|+|. .+.+..|.+ +++|+.|+|.+ +++.+-+..|.++++|+
T Consensus 49 ~~L~~LdLs~n~i~~~~~~~~~~~~~~~~~~~~~~I~~~aF~~~~~~~~~g~~~L~~l~L~~-~i~~I~~~aF~~~~~L~ 127 (329)
T 3sb4_A 49 PSLKVLDISNAEIKMYSGKAGTYPNGKFYIYMANFVPAYAFSNVVNGVTKGKQTLEKVILSE-KIKNIEDAAFKGCDNLK 127 (329)
T ss_dssp TTCCEEEEEEEEECCEEESSSSSGGGCCEEECTTEECTTTTEEEETTEEEECTTCCC-CBCT-TCCEECTTTTTTCTTCC
T ss_pred ccCeEEecCcceeEEecCccccccccccccccccccCHHHhcccccccccccCCCcEEECCc-cccchhHHHhhcCcccc
Confidence 57889999999888 334556777 99999999999 88877778899999999
Q ss_pred eEEecCccCCCCCCcccCCCCCccEEeccCCcc----cccCCCCC-----------------------------------
Q 005226 121 SIFLYGNNLSGSLPPSVCNLPRLQNLDLSNNSF----SGSLPDGL----------------------------------- 161 (707)
Q Consensus 121 ~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l----~~~~p~~~----------------------------------- 161 (707)
.|+|++|.+....+..|..+.++..+.++.+.. .......|
T Consensus 128 ~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L~~~i~~~~~~~l~~~~~~~~~~~~~~~~l 207 (329)
T 3sb4_A 128 ICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPLETTIQVGAMGKLEDEIMKAGLQPRDINFL 207 (329)
T ss_dssp EEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCCEEEEEECTTCCHHHHHHHTTCCGGGCSEE
T ss_pred eEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccccccccccccceeEEecCCCcHHHHHhhcccCccccceE
Confidence 999999999877778888888888887766332 00000111
Q ss_pred ---------------cccchhhhhhhcCCcccccCCCcccccCCCccEEeccCCCCCCCCCcchhhhhcccc-EEEeccC
Q 005226 162 ---------------KNCKQLQRLILARNKFSGQIPAGIWPELENLVQLDLSDNDFKGPIPNDLGELQSLSA-TLNLSYN 225 (707)
Q Consensus 162 ---------------~~l~~L~~L~l~~N~l~~~lp~~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~-~L~l~~N 225 (707)
..+++|+.|+|++|+++ .||...|.++.+|+.|+|.+| ++...+..|.++++| + .|++.+
T Consensus 208 ~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~-~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L-~~~l~l~~- 283 (329)
T 3sb4_A 208 TIEGKLDNADFKLIRDYMPNLVSLDISKTNAT-TIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRL-AGTLELPA- 283 (329)
T ss_dssp EEEECCCHHHHHHHHHHCTTCCEEECTTBCCC-EECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTC-CEEEEECT-
T ss_pred EEeeeecHHHHHHHHHhcCCCeEEECCCCCcc-eecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhc-cEEEEEcc-
Confidence 02789999999999999 999999999999999999998 886777889999999 8 999998
Q ss_pred cCcCCCCCcCCCCCCccEEEccCCcCcccCC
Q 005226 226 HLSGKIPKSLGNLPVTVSFDLRGNNLSGEIP 256 (707)
Q Consensus 226 ~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p 256 (707)
.++..-+.+|.++++|+.+++++|+++...+
T Consensus 284 ~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~ 314 (329)
T 3sb4_A 284 SVTAIEFGAFMGCDNLRYVLATGDKITTLGD 314 (329)
T ss_dssp TCCEECTTTTTTCTTEEEEEECSSCCCEECT
T ss_pred cceEEchhhhhCCccCCEEEeCCCccCccch
Confidence 7876778999999999999999999986655
No 389
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.54 E-value=1.3e-14 Score=136.86 Aligned_cols=104 Identities=30% Similarity=0.415 Sum_probs=56.2
Q ss_pred ceEEecCccCCCCCCcccCCCCCccEEeccCCcccccCCCCCcccchhhhhhhcCCcccccCCCcccccCCCccEEeccC
Q 005226 120 HSIFLYGNNLSGSLPPSVCNLPRLQNLDLSNNSFSGSLPDGLKNCKQLQRLILARNKFSGQIPAGIWPELENLVQLDLSD 199 (707)
Q Consensus 120 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~lp~~~~~~l~~L~~L~ls~ 199 (707)
+.|++++|+|+ .+|..+. ++|+.|+|++|+|++..|..|.++++|+.|+|++|+|+ .+|...|..+++|++|+|++
T Consensus 12 ~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 12 TTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLT-VLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCC-CCCTTTTTTCTTCCEEECCS
T ss_pred CEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcC-ccChhhccCCCCCCEEECCC
Confidence 34455555554 3444332 45555555555555444444444444444444444444 55655566666666666666
Q ss_pred CCCCCCCCcchhhhhccccEEEeccCcCc
Q 005226 200 NDFKGPIPNDLGELQSLSATLNLSYNHLS 228 (707)
Q Consensus 200 N~l~~~~p~~~~~l~~L~~~L~l~~N~l~ 228 (707)
|+|++..+..|.++++| +.|+|++|.++
T Consensus 88 N~l~~~~~~~~~~l~~L-~~L~L~~N~~~ 115 (170)
T 3g39_A 88 NQLKSIPRGAFDNLKSL-THIWLLNNPWD 115 (170)
T ss_dssp SCCCCCCTTTTTTCTTC-CEEECCSSCBC
T ss_pred CccCEeCHHHhcCCCCC-CEEEeCCCCCC
Confidence 66665444455555555 45555555555
No 390
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.52 E-value=2.2e-14 Score=135.90 Aligned_cols=86 Identities=33% Similarity=0.453 Sum_probs=50.3
Q ss_pred CCccEEeccCCcccccCCCCCcccchhhhhhhcCCcccccCCCcccccCCCccEEeccCCCCCCCCCcchhhhhccccEE
Q 005226 141 PRLQNLDLSNNSFSGSLPDGLKNCKQLQRLILARNKFSGQIPAGIWPELENLVQLDLSDNDFKGPIPNDLGELQSLSATL 220 (707)
Q Consensus 141 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~lp~~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~L 220 (707)
++|+.|+|++|+|++..|..|.++++|+.|+|++|+|+ .+|...|..+++|++|+|++|+|++..+..|..+++| +.|
T Consensus 33 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L-~~L 110 (174)
T 2r9u_A 33 TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLT-AIPTGVFDKLTQLTQLDLNDNHLKSIPRGAFDNLKSL-THI 110 (174)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTC-SEE
T ss_pred CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCC-ccChhHhCCcchhhEEECCCCccceeCHHHhccccCC-CEE
Confidence 44444555555444443444444444444444444444 5666666677777777777777775444456666666 566
Q ss_pred EeccCcCc
Q 005226 221 NLSYNHLS 228 (707)
Q Consensus 221 ~l~~N~l~ 228 (707)
+|++|.+.
T Consensus 111 ~L~~N~~~ 118 (174)
T 2r9u_A 111 YLYNNPWD 118 (174)
T ss_dssp ECCSSCBC
T ss_pred EeCCCCcc
Confidence 66666666
No 391
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.46 E-value=7.5e-14 Score=146.68 Aligned_cols=200 Identities=14% Similarity=0.110 Sum_probs=145.1
Q ss_pred CcEEEEEcCCCCccccCCCCcCC-CCCCCEEEcccCCcC--------------------CCCCccccC--------CCCC
Q 005226 69 PRVVGVAISGKNVRGYIPSELGS-LIYLRRLNLHNNNLF--------------------GSLPDQLFN--------ATSL 119 (707)
Q Consensus 69 ~~v~~L~L~~n~l~~~~~~~l~~-l~~L~~L~L~~N~l~--------------------~~~p~~~~~--------l~~L 119 (707)
.+++.|.++++ +...--..+.. +++|+.|||++|+|. .+.+..|.+ +++|
T Consensus 25 ~~l~~L~l~g~-i~~~~~~~l~~~l~~L~~LdLs~n~i~~~~~~~~~~~~~~~~~~~~~~I~~~aF~~~~~~~~~g~~~L 103 (329)
T 3sb4_A 25 NSITHLTLTGK-LNAEDFRHLRDEFPSLKVLDISNAEIKMYSGKAGTYPNGKFYIYMANFVPAYAFSNVVNGVTKGKQTL 103 (329)
T ss_dssp HHCSEEEEEEE-ECHHHHHHHHHSCTTCCEEEEEEEEECCEEESSSSSGGGCCEEECTTEECTTTTEEEETTEEEECTTC
T ss_pred CceeEEEEecc-ccHHHHHHHHHhhccCeEEecCcceeEEecCccccccccccccccccccCHHHhcccccccccccCCC
Confidence 46778888764 21111112223 889999999999998 233456777 9999
Q ss_pred ceEEecCccCCCCCCcccCCCCCccEEeccCCcccccCCCCCcccchhhhhhhcCCccc---ccCCCccc----------
Q 005226 120 HSIFLYGNNLSGSLPPSVCNLPRLQNLDLSNNSFSGSLPDGLKNCKQLQRLILARNKFS---GQIPAGIW---------- 186 (707)
Q Consensus 120 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~---~~lp~~~~---------- 186 (707)
+.|+|.+ +++.+-+.+|.++++|+.|+|++|.+....+..|.++.++..+.+..+... ..+....|
T Consensus 104 ~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L~~~i 182 (329)
T 3sb4_A 104 EKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPLETTI 182 (329)
T ss_dssp CC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCCEEEE
T ss_pred cEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccccccccccccceeE
Confidence 9999999 888677778999999999999999998777888999888887776663220 01111111
Q ss_pred ----------------------------------------ccCCCccEEeccCCCCCCCCCcchhhhhccccEEEeccCc
Q 005226 187 ----------------------------------------PELENLVQLDLSDNDFKGPIPNDLGELQSLSATLNLSYNH 226 (707)
Q Consensus 187 ----------------------------------------~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~L~l~~N~ 226 (707)
..+++|+.|+|++|+++...+..|.++++| +.|+|.+|
T Consensus 183 ~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L-~~l~l~~n- 260 (329)
T 3sb4_A 183 QVGAMGKLEDEIMKAGLQPRDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYL-LKIKLPHN- 260 (329)
T ss_dssp EECTTCCHHHHHHHTTCCGGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTC-CEEECCTT-
T ss_pred EecCCCcHHHHHhhcccCccccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCC-CEEECCcc-
Confidence 127899999999999997777789999999 89999998
Q ss_pred CcCCCCCcCCCCCCcc-EEEccCCcCcccCCCC-CCCCCCCCcccCCCC
Q 005226 227 LSGKIPKSLGNLPVTV-SFDLRGNNLSGEIPQT-GSFANQGPTAFLSNP 273 (707)
Q Consensus 227 l~~~~p~~~~~l~~L~-~l~l~~N~l~~~~p~~-~~~~~~~~~~~~~N~ 273 (707)
++..-+.+|.++++|+ .+++.+ .++...+.. ....++..+.+.+|.
T Consensus 261 i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~ 308 (329)
T 3sb4_A 261 LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDK 308 (329)
T ss_dssp CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSC
T ss_pred cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCc
Confidence 8877788999999999 999998 676444421 122344445554443
No 392
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.42 E-value=1.5e-13 Score=145.57 Aligned_cols=109 Identities=24% Similarity=0.270 Sum_probs=77.9
Q ss_pred CceeceeEeCCCCCCCCCcEEEEEcCCC-CccccCCCCcCCCCCCCEEEccc-CCcCCCCCccccCCCCCceEEecCccC
Q 005226 52 PCRWSGISCMNITGFPDPRVVGVAISGK-NVRGYIPSELGSLIYLRRLNLHN-NNLFGSLPDQLFNATSLHSIFLYGNNL 129 (707)
Q Consensus 52 ~C~w~gv~c~~~~~~~~~~v~~L~L~~n-~l~~~~~~~l~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~L~~N~l 129 (707)
.|.|..|.|.+ + +|++ +|. |..+++|++|+|++ |+|++..+..|.+|++|++|+|++|+|
T Consensus 7 ~C~~~~v~~~~----------------~n~l~~-ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l 68 (347)
T 2ifg_A 7 PHGSSGLRCTR----------------DGALDS-LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGL 68 (347)
T ss_dssp CSSSSCEECCS----------------SCCCTT-TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCC
T ss_pred cccCCEEEcCC----------------CCCCCc-cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCcc
Confidence 47777777743 3 5664 566 88888888888885 888877667777777777777777777
Q ss_pred CCCCCcccCCCCCccEEeccCCcccccCCCCCcccchhhhhhhcCCcccccCCCcccccCCCccEEeccCCCCCC
Q 005226 130 SGSLPPSVCNLPRLQNLDLSNNSFSGSLPDGLKNCKQLQRLILARNKFSGQIPAGIWPELENLVQLDLSDNDFKG 204 (707)
Q Consensus 130 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~lp~~~~~~l~~L~~L~ls~N~l~~ 204 (707)
++..|..|.+|++|+.|+|++|+|+ .+|...|..++ |+.|+|++|.|..
T Consensus 69 ~~~~~~~~~~l~~L~~L~l~~N~l~-------------------------~~~~~~~~~~~-L~~l~l~~N~~~c 117 (347)
T 2ifg_A 69 RFVAPDAFHFTPRLSRLNLSFNALE-------------------------SLSWKTVQGLS-LQELVLSGNPLHC 117 (347)
T ss_dssp CEECTTGGGSCSCCCEEECCSSCCS-------------------------CCCSTTTCSCC-CCEEECCSSCCCC
T ss_pred ceeCHHHhcCCcCCCEEeCCCCccc-------------------------eeCHHHcccCC-ceEEEeeCCCccC
Confidence 7777777777777777777777776 44444444444 7777777777763
No 393
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.42 E-value=2.3e-13 Score=144.06 Aligned_cols=103 Identities=20% Similarity=0.189 Sum_probs=68.0
Q ss_pred EEecCc-cCCCCCCcccCCCCCccEEeccC-CcccccCCCCCcccchhhhhhhcCCcccccCCCcccccCCCccEEeccC
Q 005226 122 IFLYGN-NLSGSLPPSVCNLPRLQNLDLSN-NSFSGSLPDGLKNCKQLQRLILARNKFSGQIPAGIWPELENLVQLDLSD 199 (707)
Q Consensus 122 L~L~~N-~l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~lp~~~~~~l~~L~~L~ls~ 199 (707)
+++++| +|+ .+|. |..+++|+.|+|++ |+|++..|..|.+|++|+.|+|++|+|+ .+|...|..+++|+.|+|++
T Consensus 13 v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~~~~~~~~l~~L~~L~l~~ 89 (347)
T 2ifg_A 13 LRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLR-FVAPDAFHFTPRLSRLNLSF 89 (347)
T ss_dssp EECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCC-EECTTGGGSCSCCCEEECCS
T ss_pred EEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccc-eeCHHHhcCCcCCCEEeCCC
Confidence 344444 444 3444 55555555555553 5555444455555555555555555555 56666678999999999999
Q ss_pred CCCCCCCCcchhhhhccccEEEeccCcCcC
Q 005226 200 NDFKGPIPNDLGELQSLSATLNLSYNHLSG 229 (707)
Q Consensus 200 N~l~~~~p~~~~~l~~L~~~L~l~~N~l~~ 229 (707)
|+|++..+..|..++ | +.|+|++|.|..
T Consensus 90 N~l~~~~~~~~~~~~-L-~~l~l~~N~~~c 117 (347)
T 2ifg_A 90 NALESLSWKTVQGLS-L-QELVLSGNPLHC 117 (347)
T ss_dssp SCCSCCCSTTTCSCC-C-CEEECCSSCCCC
T ss_pred CccceeCHHHcccCC-c-eEEEeeCCCccC
Confidence 999976666666665 7 899999999983
No 394
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.28 E-value=5.9e-15 Score=157.33 Aligned_cols=134 Identities=17% Similarity=0.144 Sum_probs=67.4
Q ss_pred CcEEEEEcCCCCccccCCCCcCC-----CCCCCEEEcccCCcCCCCCccc-cCCCCCceEEecCccCCCCCCccc-----
Q 005226 69 PRVVGVAISGKNVRGYIPSELGS-----LIYLRRLNLHNNNLFGSLPDQL-FNATSLHSIFLYGNNLSGSLPPSV----- 137 (707)
Q Consensus 69 ~~v~~L~L~~n~l~~~~~~~l~~-----l~~L~~L~L~~N~l~~~~p~~~-~~l~~L~~L~L~~N~l~~~~p~~~----- 137 (707)
.+++.|+|++|.|+......|.. .++|++|+|++|.|+..-...+ ..+++|++|+|++|+|+......+
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~ 151 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLL 151 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHH
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHH
Confidence 35667777777766533222222 2567777777776653222222 234566677777776653322222
Q ss_pred CCCCCccEEeccCCcccc----cCCCCCcccchhhhhhhcCCccccc----CCCcccccCCCccEEeccCCCCC
Q 005226 138 CNLPRLQNLDLSNNSFSG----SLPDGLKNCKQLQRLILARNKFSGQ----IPAGIWPELENLVQLDLSDNDFK 203 (707)
Q Consensus 138 ~~l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~l~~N~l~~~----lp~~~~~~l~~L~~L~ls~N~l~ 203 (707)
...++|+.|+|++|.|+. .++..+..+++|++|+|++|+|++. ++. .+...++|+.|+|++|.|+
T Consensus 152 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~-~L~~~~~L~~L~Ls~N~i~ 224 (372)
T 3un9_A 152 HDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAA-QLDRNRQLQELNVAYNGAG 224 (372)
T ss_dssp STTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHH-HGGGCSCCCEEECCSSCCC
T ss_pred hcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHH-HHhcCCCcCeEECCCCCCC
Confidence 234566666666666653 1223334455555555555555411 111 1233445555555555554
No 395
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.25 E-value=2.3e-14 Score=152.81 Aligned_cols=161 Identities=21% Similarity=0.231 Sum_probs=119.6
Q ss_pred CCCCCEEEcccCCcCCCCCccccC-----CCCCceEEecCccCCCCCCccc-CCCCCccEEeccCCcccccCCCCC----
Q 005226 92 LIYLRRLNLHNNNLFGSLPDQLFN-----ATSLHSIFLYGNNLSGSLPPSV-CNLPRLQNLDLSNNSFSGSLPDGL---- 161 (707)
Q Consensus 92 l~~L~~L~L~~N~l~~~~p~~~~~-----l~~L~~L~L~~N~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~~~p~~~---- 161 (707)
+++|+.|+|++|.|+......+.. .++|++|+|++|.|+......+ ..+++|+.|+|++|+|+..-...+
T Consensus 71 ~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L 150 (372)
T 3un9_A 71 LSSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLL 150 (372)
T ss_dssp HTTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHH
T ss_pred HhhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHH
Confidence 467999999999998544444433 3799999999999974333333 346789999999999975433333
Q ss_pred -cccchhhhhhhcCCccccc----CCCcccccCCCccEEeccCCCCCCC----CCcchhhhhccccEEEeccCcCcCC--
Q 005226 162 -KNCKQLQRLILARNKFSGQ----IPAGIWPELENLVQLDLSDNDFKGP----IPNDLGELQSLSATLNLSYNHLSGK-- 230 (707)
Q Consensus 162 -~~l~~L~~L~l~~N~l~~~----lp~~~~~~l~~L~~L~ls~N~l~~~----~p~~~~~l~~L~~~L~l~~N~l~~~-- 230 (707)
...++|+.|+|++|+|+.. ++.. +..+++|++|+|++|.|++. ++..+...++| ++|+|++|.|+..
T Consensus 151 ~~~~~~L~~L~Ls~n~l~~~~~~~l~~~-L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L-~~L~Ls~N~i~~~g~ 228 (372)
T 3un9_A 151 LHDQCQITTLRLSNNPLTAAGVAVLMEG-LAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQL-QELNVAYNGAGDTAA 228 (372)
T ss_dssp HSTTCCCCEEECCSSCCHHHHHHHHHHH-HHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCC-CEEECCSSCCCHHHH
T ss_pred HhcCCccceeeCCCCCCChHHHHHHHHH-HhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCc-CeEECCCCCCCHHHH
Confidence 2457899999999999721 2222 25688999999999999743 24556677888 7999999999852
Q ss_pred --CCCcCCCCCCccEEEccCCcCccc
Q 005226 231 --IPKSLGNLPVTVSFDLRGNNLSGE 254 (707)
Q Consensus 231 --~p~~~~~l~~L~~l~l~~N~l~~~ 254 (707)
++..+...++|+.|+|++|+|+..
T Consensus 229 ~~l~~~L~~~~~L~~L~Ls~N~i~~~ 254 (372)
T 3un9_A 229 LALARAAREHPSLELLHLYFNELSSE 254 (372)
T ss_dssp HHHHHHHHHCSSCCEEECTTSSCCHH
T ss_pred HHHHHHHHhCCCCCEEeccCCCCCHH
Confidence 344455678999999999999753
No 396
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.23 E-value=3.1e-11 Score=129.79 Aligned_cols=170 Identities=11% Similarity=0.101 Sum_probs=76.4
Q ss_pred cEEEEEcCCCCccccCCCCcCCCCCCCEEEcccCCcCCCCCccccCCCCCceEEecCccCCCCCCcccCCCCCccEEecc
Q 005226 70 RVVGVAISGKNVRGYIPSELGSLIYLRRLNLHNNNLFGSLPDQLFNATSLHSIFLYGNNLSGSLPPSVCNLPRLQNLDLS 149 (707)
Q Consensus 70 ~v~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 149 (707)
+++.+.|.++ ++.+-..+|.+. +|+.+.|.+ .++.+-+..|.++++|+.++|++|+++......|. ..+|+.+.|.
T Consensus 136 ~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF~-~~~L~~l~lp 211 (401)
T 4fdw_A 136 QIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITKLPASTFV-YAGIEEVLLP 211 (401)
T ss_dssp CCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSEECTTTTT-TCCCSEEECC
T ss_pred CccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceEechhhEe-ecccCEEEeC
Confidence 3444444433 443434444442 355555543 34433444455555555555555555422222232 3445555544
Q ss_pred CCcccccCCCCCcccchhhhhhhcC---------------------CcccccCCCcccccCCCccEEeccCCCCC-----
Q 005226 150 NNSFSGSLPDGLKNCKQLQRLILAR---------------------NKFSGQIPAGIWPELENLVQLDLSDNDFK----- 203 (707)
Q Consensus 150 ~N~l~~~~p~~~~~l~~L~~L~l~~---------------------N~l~~~lp~~~~~~l~~L~~L~ls~N~l~----- 203 (707)
+| ++..-..+|.++++|+.++|.. |.++ .|+...|..+++|+.+++.+|.+.
T Consensus 212 ~~-l~~I~~~aF~~~~~L~~l~l~~~l~~I~~~aF~~~~L~~i~lp~~i~-~I~~~aF~~c~~L~~l~l~~~~~~~~~~~ 289 (401)
T 4fdw_A 212 VT-LKEIGSQAFLKTSQLKTIEIPENVSTIGQEAFRESGITTVKLPNGVT-NIASRAFYYCPELAEVTTYGSTFNDDPEA 289 (401)
T ss_dssp TT-CCEECTTTTTTCTTCCCEECCTTCCEECTTTTTTCCCSEEEEETTCC-EECTTTTTTCTTCCEEEEESSCCCCCTTC
T ss_pred Cc-hheehhhHhhCCCCCCEEecCCCccCccccccccCCccEEEeCCCcc-EEChhHhhCCCCCCEEEeCCccccCCccc
Confidence 22 3333334444444444444443 3333 444444555555555555544443
Q ss_pred CCCCcchhhhhccccEEEeccCcCcCCCCCcCCCCCCccEEEcc
Q 005226 204 GPIPNDLGELQSLSATLNLSYNHLSGKIPKSLGNLPVTVSFDLR 247 (707)
Q Consensus 204 ~~~p~~~~~l~~L~~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~ 247 (707)
...+..|.++++| +.++|. |.++..-..+|.++++|+.+++.
T Consensus 290 ~I~~~aF~~c~~L-~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp 331 (401)
T 4fdw_A 290 MIHPYCLEGCPKL-ARFEIP-ESIRILGQGLLGGNRKVTQLTIP 331 (401)
T ss_dssp EECTTTTTTCTTC-CEECCC-TTCCEECTTTTTTCCSCCEEEEC
T ss_pred EECHHHhhCCccC-CeEEeC-CceEEEhhhhhcCCCCccEEEEC
Confidence 2233444555555 455554 22443334444555555555553
No 397
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.21 E-value=4.3e-11 Score=121.14 Aligned_cols=135 Identities=15% Similarity=0.088 Sum_probs=105.9
Q ss_pred eecccCeeEEEEEEeCCCceEEEEEcCCCchhhHHHHHHHHHHHHhc-CCCceeeeEEEEEcCCcceEEEEeecCCChHH
Q 005226 414 VLGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKV-KHPNIVKLRAYYWAPDEKLLISDFISNGNLAN 492 (707)
Q Consensus 414 ~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lV~e~~~~gsL~~ 492 (707)
.++.|+++.||++... +..+++|+...........+.+|+++++.+ .|..+.++++++...+..++||||++|.+|.+
T Consensus 21 ~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~~ 99 (263)
T 3tm0_A 21 DTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADGVLCSE 99 (263)
T ss_dssp CCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCSSEEHHH
T ss_pred eccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEEecCCeehhh
Confidence 4667778899999864 678999998653222235688999999999 46778899999998888999999999999987
Q ss_pred HHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcC--------------------------------------------
Q 005226 493 ALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECS-------------------------------------------- 528 (707)
Q Consensus 493 ~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~-------------------------------------------- 528 (707)
.+... .....++.+++++|..||+..
T Consensus 100 ~~~~~----------~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (263)
T 3tm0_A 100 EYEDE----------QSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDPRE 169 (263)
T ss_dssp HCCTT----------TCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCSSSSHHH
T ss_pred ccCCc----------ccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccccCCCHHH
Confidence 64211 123478889999999999821
Q ss_pred ------------CCCceecCCCCCCeEEcCCCCeEEecccccc
Q 005226 529 ------------PRKFVHGDIKPSNILLDNDFQPYISDFGLSR 559 (707)
Q Consensus 529 ------------~~~iiHrDlk~~NIll~~~~~~kl~DfGla~ 559 (707)
+..++|+|++|.||+++++..+.|+||+.+.
T Consensus 170 l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 170 LYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp HHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred HHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 1358999999999999876667899999764
No 398
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.17 E-value=9.5e-11 Score=125.99 Aligned_cols=178 Identities=10% Similarity=0.140 Sum_probs=124.8
Q ss_pred CcEEEEEcCCCCccccCCCCcCCCCCCCEEEcccCCcCCCCCccccCCCCCceEEecCccCCCCCCcccCCCCCccEEec
Q 005226 69 PRVVGVAISGKNVRGYIPSELGSLIYLRRLNLHNNNLFGSLPDQLFNATSLHSIFLYGNNLSGSLPPSVCNLPRLQNLDL 148 (707)
Q Consensus 69 ~~v~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 148 (707)
.+++.+.|.+ ++..+-+..|.++++|+.++|++|+++.+....|. ..+|+.+.|..| ++.+-..+|.++++|+.++|
T Consensus 157 ~~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l 233 (401)
T 4fdw_A 157 STVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEI 233 (401)
T ss_dssp CCCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEEC
T ss_pred CCceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEec
Confidence 3566666664 55555566677777777777776666633232332 455555555432 44333344444444444444
Q ss_pred cC---------------------CcccccCCCCCcccchhhhhhhcCCccc----ccCCCcccccCCCccEEeccCCCCC
Q 005226 149 SN---------------------NSFSGSLPDGLKNCKQLQRLILARNKFS----GQIPAGIWPELENLVQLDLSDNDFK 203 (707)
Q Consensus 149 s~---------------------N~l~~~~p~~~~~l~~L~~L~l~~N~l~----~~lp~~~~~~l~~L~~L~ls~N~l~ 203 (707)
.. |.++..-+..|.+|++|+.+++.+|.+. ..|+...|..+++|+.++|. |.++
T Consensus 234 ~~~l~~I~~~aF~~~~L~~i~lp~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~ 312 (401)
T 4fdw_A 234 PENVSTIGQEAFRESGITTVKLPNGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIR 312 (401)
T ss_dssp CTTCCEECTTTTTTCCCSEEEEETTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCC
T ss_pred CCCccCccccccccCCccEEEeCCCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceE
Confidence 43 3455455678999999999999998874 24889999999999999999 5588
Q ss_pred CCCCcchhhhhccccEEEeccCcCcCCCCCcCCCCCCccEEEccCCcCcc
Q 005226 204 GPIPNDLGELQSLSATLNLSYNHLSGKIPKSLGNLPVTVSFDLRGNNLSG 253 (707)
Q Consensus 204 ~~~p~~~~~l~~L~~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~ 253 (707)
..-...|.++++| +.+.|.+| ++..-+.+|.++ +|+.+++++|.+..
T Consensus 313 ~I~~~aF~~c~~L-~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~ 359 (401)
T 4fdw_A 313 ILGQGLLGGNRKV-TQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQ 359 (401)
T ss_dssp EECTTTTTTCCSC-CEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCCB
T ss_pred EEhhhhhcCCCCc-cEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCcc
Confidence 6777899999999 79999665 776778899999 99999999997764
No 399
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.17 E-value=7.3e-13 Score=150.70 Aligned_cols=175 Identities=13% Similarity=0.004 Sum_probs=100.5
Q ss_pred CcEEEEEcCCCCcccc----CCCCcCCCCCCCEEEcccCCcCC----CCCccccCCCCCceEEecCccCCCCCCcccCCC
Q 005226 69 PRVVGVAISGKNVRGY----IPSELGSLIYLRRLNLHNNNLFG----SLPDQLFNATSLHSIFLYGNNLSGSLPPSVCNL 140 (707)
Q Consensus 69 ~~v~~L~L~~n~l~~~----~~~~l~~l~~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 140 (707)
++++.|+|++|.+++. ++..+.++++|++|+|++|.+++ .++..+.++++|++|+|++|.+.+ +|..+..+
T Consensus 164 ~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~ 242 (592)
T 3ogk_B 164 RKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKAA 242 (592)
T ss_dssp TTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHHC
T ss_pred CCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhhh
Confidence 5788899999987765 33345678888999999888873 334445678889999998888873 66677777
Q ss_pred CCccEEeccCCccc---ccCCCCCcccchhhhhhhcCCcccccCCCcccccCCCccEEeccCCCCCCCCC-cchhhhhcc
Q 005226 141 PRLQNLDLSNNSFS---GSLPDGLKNCKQLQRLILARNKFSGQIPAGIWPELENLVQLDLSDNDFKGPIP-NDLGELQSL 216 (707)
Q Consensus 141 ~~L~~L~Ls~N~l~---~~~p~~~~~l~~L~~L~l~~N~l~~~lp~~~~~~l~~L~~L~ls~N~l~~~~p-~~~~~l~~L 216 (707)
++|+.|+++++... +..+..+..+++|+.|+++++... .+|. ++..+++|++|+|++|.+++... ..+..+++|
T Consensus 243 ~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~-~l~~-~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L 320 (592)
T 3ogk_B 243 ANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGPN-EMPI-LFPFAAQIRKLDLLYALLETEDHCTLIQKCPNL 320 (592)
T ss_dssp TTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCCTT-TGGG-GGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTC
T ss_pred hHHHhhcccccccccchHHHHHHhhccccccccCccccchh-HHHH-HHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCC
Confidence 77777777643322 122334455555555555554332 3333 23445555555555555443222 123445555
Q ss_pred ccEEEeccCcCcCCCCCcCCCCCCccEEEcc
Q 005226 217 SATLNLSYNHLSGKIPKSLGNLPVTVSFDLR 247 (707)
Q Consensus 217 ~~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~ 247 (707)
+.|++++|...+.++..+..+++|+.|+++
T Consensus 321 -~~L~L~~~~~~~~l~~~~~~~~~L~~L~L~ 350 (592)
T 3ogk_B 321 -EVLETRNVIGDRGLEVLAQYCKQLKRLRIE 350 (592)
T ss_dssp -CEEEEEGGGHHHHHHHHHHHCTTCCEEEEE
T ss_pred -CEEeccCccCHHHHHHHHHhCCCCCEEEee
Confidence 455555222222222222344455555555
No 400
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.16 E-value=6e-13 Score=151.41 Aligned_cols=196 Identities=13% Similarity=0.063 Sum_probs=146.3
Q ss_pred cEEEEEcCCCC-ccc-cCCCCcCCCCCCCEEEcccCCcCCC----CCccccCCCCCceEEecCccCCC----CCCcccCC
Q 005226 70 RVVGVAISGKN-VRG-YIPSELGSLIYLRRLNLHNNNLFGS----LPDQLFNATSLHSIFLYGNNLSG----SLPPSVCN 139 (707)
Q Consensus 70 ~v~~L~L~~n~-l~~-~~~~~l~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~----~~p~~~~~ 139 (707)
+++.|+|+++. ++. .++..+.++++|++|+|++|.+++. ++..+.++++|++|+|++|.+++ .++..+.+
T Consensus 139 ~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~ 218 (592)
T 3ogk_B 139 DLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARN 218 (592)
T ss_dssp GCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHH
T ss_pred cCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhh
Confidence 49999999987 221 1222334789999999999998866 44456678999999999999983 34455678
Q ss_pred CCCccEEeccCCcccccCCCCCcccchhhhhhhcCCccc---ccCCCcccccCCCccEEeccCCCCCCCCCcchhhhhcc
Q 005226 140 LPRLQNLDLSNNSFSGSLPDGLKNCKQLQRLILARNKFS---GQIPAGIWPELENLVQLDLSDNDFKGPIPNDLGELQSL 216 (707)
Q Consensus 140 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~---~~lp~~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L 216 (707)
+++|+.|+|++|.+.+ +|..+.++++|+.|+++++... +..+.. +..+++|+.|+++++... .+|..+..+++|
T Consensus 219 ~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~-l~~~~~L~~L~l~~~~~~-~l~~~~~~~~~L 295 (592)
T 3ogk_B 219 CRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMN-LVFPRKLCRLGLSYMGPN-EMPILFPFAAQI 295 (592)
T ss_dssp CTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSC-CCCCTTCCEEEETTCCTT-TGGGGGGGGGGC
T ss_pred CCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHH-hhccccccccCccccchh-HHHHHHhhcCCC
Confidence 9999999999999995 7788999999999999864332 122223 367889999999997554 788899999999
Q ss_pred ccEEEeccCcCcCCCC-CcCCCCCCccEEEccCCcCcc-cCCCC-CCCCCCCCcccC
Q 005226 217 SATLNLSYNHLSGKIP-KSLGNLPVTVSFDLRGNNLSG-EIPQT-GSFANQGPTAFL 270 (707)
Q Consensus 217 ~~~L~l~~N~l~~~~p-~~~~~l~~L~~l~l~~N~l~~-~~p~~-~~~~~~~~~~~~ 270 (707)
++|+|++|.+++... ..+..+++|+.|+++ |.+.. .++.. ..+.++..+.+.
T Consensus 296 -~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~-~~~~~~~l~~~~~~~~~L~~L~L~ 350 (592)
T 3ogk_B 296 -RKLDLLYALLETEDHCTLIQKCPNLEVLETR-NVIGDRGLEVLAQYCKQLKRLRIE 350 (592)
T ss_dssp -CEEEETTCCCCHHHHHHHHTTCTTCCEEEEE-GGGHHHHHHHHHHHCTTCCEEEEE
T ss_pred -cEEecCCCcCCHHHHHHHHHhCcCCCEEecc-CccCHHHHHHHHHhCCCCCEEEee
Confidence 899999999875443 346789999999999 54442 22211 123455555555
No 401
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.16 E-value=1e-10 Score=118.04 Aligned_cols=127 Identities=15% Similarity=0.102 Sum_probs=97.9
Q ss_pred ccCeeEEEEEEeCCCceEEEEEcCCCchhhHHHHHHHHHHHHhcCCCc--eeeeEEEEEcCCcceEEEEeecCCChHHHH
Q 005226 417 KSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPN--IVKLRAYYWAPDEKLLISDFISNGNLANAL 494 (707)
Q Consensus 417 ~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~n--iv~l~~~~~~~~~~~lV~e~~~~gsL~~~l 494 (707)
.|..+.||++...+|..+++|..... ....+.+|+++++.+.+.+ +.+++++...++..++||||++|.+|. .
T Consensus 30 gg~~~~v~~~~~~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~l~--~ 104 (264)
T 1nd4_A 30 GCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLL--S 104 (264)
T ss_dssp TTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETT--T
T ss_pred CCCCceEEEEecCCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCcccC--c
Confidence 45569999998877888999997654 2256788999999996544 556888888878889999999998884 2
Q ss_pred hCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcC----------------------------------------------
Q 005226 495 RGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECS---------------------------------------------- 528 (707)
Q Consensus 495 ~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~---------------------------------------------- 528 (707)
.. .+ ...++.++++.|..||+..
T Consensus 105 ~~--------~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (264)
T 1nd4_A 105 SH--------LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFAR 173 (264)
T ss_dssp SC--------CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHHH
T ss_pred Cc--------CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHHHHH
Confidence 11 11 2367788888888888742
Q ss_pred ---------CCCceecCCCCCCeEEcCCCCeEEecccccc
Q 005226 529 ---------PRKFVHGDIKPSNILLDNDFQPYISDFGLSR 559 (707)
Q Consensus 529 ---------~~~iiHrDlk~~NIll~~~~~~kl~DfGla~ 559 (707)
+..++|+|++|.||+++++..++|+|||.+.
T Consensus 174 l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~ 213 (264)
T 1nd4_A 174 LKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG 213 (264)
T ss_dssp HHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred HHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcc
Confidence 1129999999999999887667899999865
No 402
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.08 E-value=5.3e-13 Score=151.87 Aligned_cols=201 Identities=14% Similarity=0.137 Sum_probs=137.1
Q ss_pred CcEEEEEcCCCCccccC-CCCcCCCCCCCEEEcccCCcCCC-CCccccCCCCCceEEecC---------ccCCCCCCccc
Q 005226 69 PRVVGVAISGKNVRGYI-PSELGSLIYLRRLNLHNNNLFGS-LPDQLFNATSLHSIFLYG---------NNLSGSLPPSV 137 (707)
Q Consensus 69 ~~v~~L~L~~n~l~~~~-~~~l~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~L~~---------N~l~~~~p~~~ 137 (707)
++++.|+|++|.+++.. +..+.++++|++|+|++| ++.. ++.....+++|++|+|++ |.+++.....+
T Consensus 289 ~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~~l~~l 367 (594)
T 2p1m_B 289 SRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLVSV 367 (594)
T ss_dssp TTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEEECSCTTCSSCSSCCCHHHHHHH
T ss_pred CCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEEecCcccccccCCCCCHHHHHHH
Confidence 57899999999877543 223568899999999988 4422 222233588899998843 45553322233
Q ss_pred C-CCCCccEEeccCCcccccCCCCCc-ccchhhhhhhc--C----CcccccCCCc-----ccccCCCccEEeccCCCCCC
Q 005226 138 C-NLPRLQNLDLSNNSFSGSLPDGLK-NCKQLQRLILA--R----NKFSGQIPAG-----IWPELENLVQLDLSDNDFKG 204 (707)
Q Consensus 138 ~-~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~l~--~----N~l~~~lp~~-----~~~~l~~L~~L~ls~N~l~~ 204 (707)
. .+++|+.|+++.|.+++..+..+. .+++|+.|+|+ + |+++ ..|.. ++..+++|+.|+|++ .+++
T Consensus 368 ~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~-~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~ 445 (594)
T 2p1m_B 368 SMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLT-LEPLDIGFGAIVEHCKDLRRLSLSG-LLTD 445 (594)
T ss_dssp HHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTT-CCCTHHHHHHHHHHCTTCCEEECCS-SCCH
T ss_pred HHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCccccc-CCchhhHHHHHHhhCCCccEEeecC-cccH
Confidence 3 478899999988988865555554 58899999998 4 5666 44321 246788999999977 6765
Q ss_pred CCCcchhh-hhccccEEEeccCcCcCCCCCcC-CCCCCccEEEccCCcCcccCCC--CCCCCCCCCcccCCCC
Q 005226 205 PIPNDLGE-LQSLSATLNLSYNHLSGKIPKSL-GNLPVTVSFDLRGNNLSGEIPQ--TGSFANQGPTAFLSNP 273 (707)
Q Consensus 205 ~~p~~~~~-l~~L~~~L~l~~N~l~~~~p~~~-~~l~~L~~l~l~~N~l~~~~p~--~~~~~~~~~~~~~~N~ 273 (707)
..+..+.. +++| +.|+|++|.+++..+..+ ..+++|+.|++++|++++.... ...+.++..+.+.+|+
T Consensus 446 ~~~~~l~~~~~~L-~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~ 517 (594)
T 2p1m_B 446 KVFEYIGTYAKKM-EMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCS 517 (594)
T ss_dssp HHHHHHHHHCTTC-CEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSC
T ss_pred HHHHHHHHhchhc-cEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCC
Confidence 55556665 7788 799999999876544444 5688999999999998653321 1234556666666554
No 403
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.00 E-value=9.8e-13 Score=149.69 Aligned_cols=182 Identities=14% Similarity=0.146 Sum_probs=133.0
Q ss_pred CcEEEEEcCCCCcccc-CCCCcCCCCCCCEEEcc---------cCCcCCCCCcccc-CCCCCceEEecCccCCCCCCccc
Q 005226 69 PRVVGVAISGKNVRGY-IPSELGSLIYLRRLNLH---------NNNLFGSLPDQLF-NATSLHSIFLYGNNLSGSLPPSV 137 (707)
Q Consensus 69 ~~v~~L~L~~n~l~~~-~~~~l~~l~~L~~L~L~---------~N~l~~~~p~~~~-~l~~L~~L~L~~N~l~~~~p~~~ 137 (707)
++++.|+|++| +... ++.....+++|++|+|+ .|.+++.....+. ++++|++|+++.|++++..+..+
T Consensus 314 ~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l 392 (594)
T 2p1m_B 314 PKLQRLWVLDY-IEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITI 392 (594)
T ss_dssp TTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHH
T ss_pred CCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHH
Confidence 68999999988 4432 22223458999999994 3555533223333 48999999999999986666666
Q ss_pred C-CCCCccEEecc--C----Cccccc-----CCCCCcccchhhhhhhcCCcccccCCCcccccCCCccEEeccCCCCCCC
Q 005226 138 C-NLPRLQNLDLS--N----NSFSGS-----LPDGLKNCKQLQRLILARNKFSGQIPAGIWPELENLVQLDLSDNDFKGP 205 (707)
Q Consensus 138 ~-~l~~L~~L~Ls--~----N~l~~~-----~p~~~~~l~~L~~L~l~~N~l~~~lp~~~~~~l~~L~~L~ls~N~l~~~ 205 (707)
. .+++|+.|+|+ + |.++.. ++..+.++++|+.|+|++ .+++..+..+...+++|++|+|++|.+++.
T Consensus 393 ~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~ 471 (594)
T 2p1m_B 393 ARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDL 471 (594)
T ss_dssp HHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHH
T ss_pred HhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHH
Confidence 5 58999999999 4 566521 122266789999999977 666444444444489999999999999865
Q ss_pred CCcch-hhhhccccEEEeccCcCcCCCCC-cCCCCCCccEEEccCCcCcc
Q 005226 206 IPNDL-GELQSLSATLNLSYNHLSGKIPK-SLGNLPVTVSFDLRGNNLSG 253 (707)
Q Consensus 206 ~p~~~-~~l~~L~~~L~l~~N~l~~~~p~-~~~~l~~L~~l~l~~N~l~~ 253 (707)
.+..+ .++++| +.|+|++|.+++..+. .+..+++|+.|++++|+++.
T Consensus 472 ~~~~l~~~~~~L-~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~~~ 520 (594)
T 2p1m_B 472 GMHHVLSGCDSL-RKLEIRDCPFGDKALLANASKLETMRSLWMSSCSVSF 520 (594)
T ss_dssp HHHHHHHHCTTC-CEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSCCBH
T ss_pred HHHHHHhcCCCc-CEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCCCCH
Confidence 55555 678999 8999999999754443 34558999999999999853
No 404
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.99 E-value=1.1e-09 Score=116.27 Aligned_cols=139 Identities=18% Similarity=0.200 Sum_probs=105.1
Q ss_pred eecccCeeEEEEEEeCCCceEEEEEcC--CCc-hhhHHHHHHHHHHHHhcC--CCceeeeEEEEEcC---CcceEEEEee
Q 005226 414 VLGKSGLGIVYKVVLGNGIPVAVRRLG--EGG-EQRHREFVTEVQAIAKVK--HPNIVKLRAYYWAP---DEKLLISDFI 485 (707)
Q Consensus 414 ~lG~G~~g~Vy~~~~~~~~~vavK~~~--~~~-~~~~~~~~~E~~~l~~l~--H~niv~l~~~~~~~---~~~~lV~e~~ 485 (707)
.++.|.++.||+....+ ..+++|+.. ... ......+.+|+++++.++ +..+.++++++.+. +..++||||+
T Consensus 45 ~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme~v 123 (359)
T 3dxp_A 45 QFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIMEFV 123 (359)
T ss_dssp ECCC-CCSCEEEEECSS-CEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEECC
T ss_pred EcCCcccceEEEEEECC-ceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEEec
Confidence 58889999999998755 577888775 332 122357888999999996 45678899888766 4579999999
Q ss_pred cCCChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcC-------------------------------------
Q 005226 486 SNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECS------------------------------------- 528 (707)
Q Consensus 486 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~------------------------------------- 528 (707)
+|..+.+.. ...++..++..++.++++.|..||+..
T Consensus 124 ~G~~l~~~~-------~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (359)
T 3dxp_A 124 SGRVLWDQS-------LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPA 196 (359)
T ss_dssp CCBCCCCTT-------CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHH
T ss_pred CCeecCCCc-------cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChH
Confidence 987774321 124778889999999999999999731
Q ss_pred ------------------CCCceecCCCCCCeEEcCCCC--eEEeccccccc
Q 005226 529 ------------------PRKFVHGDIKPSNILLDNDFQ--PYISDFGLSRL 560 (707)
Q Consensus 529 ------------------~~~iiHrDlk~~NIll~~~~~--~kl~DfGla~~ 560 (707)
+..++|+|+++.||+++.++. +.|.||+.+..
T Consensus 197 ~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 197 MDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp HHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred HHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 256999999999999997753 69999998864
No 405
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.94 E-value=7.9e-11 Score=124.38 Aligned_cols=180 Identities=17% Similarity=0.211 Sum_probs=119.1
Q ss_pred CcEEEEEcCCCCccc-c-------CCCCcCCCCCCCEEEcccCCcC---------CCCCccccCCCCCceEEecCcc-CC
Q 005226 69 PRVVGVAISGKNVRG-Y-------IPSELGSLIYLRRLNLHNNNLF---------GSLPDQLFNATSLHSIFLYGNN-LS 130 (707)
Q Consensus 69 ~~v~~L~L~~n~l~~-~-------~~~~l~~l~~L~~L~L~~N~l~---------~~~p~~~~~l~~L~~L~L~~N~-l~ 130 (707)
.+|+.|.+......| . +..++..+++|+.|.+..+... +.++..+..+++|+.|+|++|. +.
T Consensus 107 ~~v~~L~lg~~~~~~~~~~~~~~~L~~s~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l~ 186 (362)
T 2ra8_A 107 PSLKQITIGXWGYEGEDCSDIADGIVENKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNLS 186 (362)
T ss_dssp GGCSEEEECCCCSSSCCSHHHHHHHHTTHHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTCB
T ss_pred hhcceEEEcccccCCCcHHHHHHHHHHhhhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCce
Confidence 467788877665442 1 1334566788999988765432 1244455677899999998883 32
Q ss_pred CCCCcccCCCCCccEEeccCCcccccCCCCCc--ccchhhhhhhcC--Cccccc-----CCCccc-ccCCCccEEeccCC
Q 005226 131 GSLPPSVCNLPRLQNLDLSNNSFSGSLPDGLK--NCKQLQRLILAR--NKFSGQ-----IPAGIW-PELENLVQLDLSDN 200 (707)
Q Consensus 131 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~l~~L~~L~l~~--N~l~~~-----lp~~~~-~~l~~L~~L~ls~N 200 (707)
++. +. +++|+.|+|..|.+.......+. .+++|+.|+|+. |...|. +...+. ..+++|++|+|++|
T Consensus 187 --l~~-~~-~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~ 262 (362)
T 2ra8_A 187 --IGK-KP-RPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDA 262 (362)
T ss_dssp --CCS-CB-CTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESC
T ss_pred --ecc-cc-CCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCC
Confidence 333 43 78899999988887643333333 678888888853 222111 111111 24789999999999
Q ss_pred CCCCCCCcchh---hhhccccEEEeccCcCcCC----CCCcCCCCCCccEEEccCCcCcc
Q 005226 201 DFKGPIPNDLG---ELQSLSATLNLSYNHLSGK----IPKSLGNLPVTVSFDLRGNNLSG 253 (707)
Q Consensus 201 ~l~~~~p~~~~---~l~~L~~~L~l~~N~l~~~----~p~~~~~l~~L~~l~l~~N~l~~ 253 (707)
.+.+..+..+. .+++| ++|+|+.|.|+.. ++..+..+++|+.|++++|.++.
T Consensus 263 ~i~~~~~~~la~a~~~~~L-~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d 321 (362)
T 2ra8_A 263 EEQNVVVEMFLESDILPQL-ETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSD 321 (362)
T ss_dssp TTHHHHHHHHHHCSSGGGC-SEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCH
T ss_pred CCchHHHHHHHhCccCCCC-CEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCH
Confidence 98754444444 37788 7999999998853 45555567899999999998874
No 406
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.88 E-value=3.5e-12 Score=127.99 Aligned_cols=120 Identities=18% Similarity=0.141 Sum_probs=53.8
Q ss_pred CceeceeEeCCCCCCCCCcEEEEEcCC---CCccccC-CCCcCCCCCCCEEEcccCCcCCCCCc-cccCCCCCce--EEe
Q 005226 52 PCRWSGISCMNITGFPDPRVVGVAISG---KNVRGYI-PSELGSLIYLRRLNLHNNNLFGSLPD-QLFNATSLHS--IFL 124 (707)
Q Consensus 52 ~C~w~gv~c~~~~~~~~~~v~~L~L~~---n~l~~~~-~~~l~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~--L~L 124 (707)
.|.|.|+.|.... .+|..+...+ ..+.+.+ |+.+..++. .|...+|.-++.++- .|...+.|+. +++
T Consensus 77 l~~~~g~i~~~~~----~ki~~~v~~~~~~~~~~~~l~~~~~~~Lk~--~l~~ryn~~~~~LdLs~l~~dp~L~~~~l~l 150 (267)
T 3rw6_A 77 LKAVNYKILDREN----RRISIIINSSAPPHTILNELKPEQVEQLKL--IMSKRYDGSQQALDLKGLRSDPDLVAQNIDV 150 (267)
T ss_dssp HHHTTSSCBCTTS----CBCCCEEEECCCCHHHHTSCCHHHHHHHHH--HHHHTEETTTTEEECTTGGGCHHHHHTTCCC
T ss_pred HHhcCcEEECCCC----CEEEEEEecCCCcccccccCCHHHHHHHHH--HHHhccchhccccCHHHcCCCcchhhcCccc
Confidence 5889999998522 3555444433 2222222 222222221 222333333322221 1344444544 555
Q ss_pred cCccCCCCCCc----ccCCCCCccEEeccCCcccc--cCCCCCcccchhhhhhhcCCccc
Q 005226 125 YGNNLSGSLPP----SVCNLPRLQNLDLSNNSFSG--SLPDGLKNCKQLQRLILARNKFS 178 (707)
Q Consensus 125 ~~N~l~~~~p~----~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~l~~N~l~ 178 (707)
+.|+.. .++. ...++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|+
T Consensus 151 ~~N~~~-~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~ 209 (267)
T 3rw6_A 151 VLNRRS-CMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELK 209 (267)
T ss_dssp CTTSHH-HHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCC
T ss_pred cCCHHH-HHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccC
Confidence 656433 2221 12345666666666666664 22333444444444444444444
No 407
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.80 E-value=1.4e-09 Score=112.54 Aligned_cols=194 Identities=18% Similarity=0.149 Sum_probs=122.0
Q ss_pred eecccCeeEEEEEEeCCCceEEEEEcCCCchhhHHHHHHHHHHHHhc-CCCc--eeeeEEEEEcCC---cceEEEEeecC
Q 005226 414 VLGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKV-KHPN--IVKLRAYYWAPD---EKLLISDFISN 487 (707)
Q Consensus 414 ~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~n--iv~l~~~~~~~~---~~~lV~e~~~~ 487 (707)
.++.|....||+.. ..+++|..... .....+.+|+++++.+ .+.. +.+++......+ ..|+||+|++|
T Consensus 27 ~~~~G~~n~v~~v~----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i~G 100 (304)
T 3sg8_A 27 ISGEGNDCIAYEIN----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKIKG 100 (304)
T ss_dssp EEEECSSEEEEEST----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECCCC
T ss_pred ecCCCCcceEEEEC----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcccCC
Confidence 58899999999863 56888885432 2346788999999988 4433 344554443333 34899999999
Q ss_pred CChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcC---------------------------------------
Q 005226 488 GNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECS--------------------------------------- 528 (707)
Q Consensus 488 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~--------------------------------------- 528 (707)
.+|.+.... .++..++..++.++++.|+.||+..
T Consensus 101 ~~l~~~~~~-------~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 173 (304)
T 3sg8_A 101 VPLTPLLLN-------NLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKV 173 (304)
T ss_dssp EECCHHHHH-------TSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHH
T ss_pred eECCccccc-------cCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHH
Confidence 888754331 3677788888999999999998621
Q ss_pred ----------------CCCceecCCCCCCeEEcC--CCCeEEecccccccccccCCCCCCCCCCcCCCCCCCCcccccc-
Q 005226 529 ----------------PRKFVHGDIKPSNILLDN--DFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEK- 589 (707)
Q Consensus 529 ----------------~~~iiHrDlk~~NIll~~--~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g- 589 (707)
+..++|+|++|.||++++ ...+.|+||+.+..-....+....... . ....+.....
T Consensus 174 ~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~----~-~~~~~~~~~~~ 248 (304)
T 3sg8_A 174 DDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMED----D-EEYGMEFVSKI 248 (304)
T ss_dssp HHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCT----T-TSCCHHHHHHH
T ss_pred HHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhh----c-cccCHHHHHHH
Confidence 135799999999999998 456899999988653211000000000 0 0000110000
Q ss_pred Cccc--cC-CCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCC
Q 005226 590 TNNY--RA-PEARVPGNRPMQKWDVYSFGVVLLELLTGKSPE 628 (707)
Q Consensus 590 t~~y--~a-PE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~ 628 (707)
-..| .. |+.. .......+.|+++.++|.+.+|..+|
T Consensus 249 l~~Y~~~~~~~~~---~r~~~~~~~~~l~~~~~~~~~g~~~~ 287 (304)
T 3sg8_A 249 LNHYKHKDIPTVL---EKYRMKEKYWSFEKIIYGKEYGYMDW 287 (304)
T ss_dssp HHHHTCSCHHHHH---HHHHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHcCCCCcHHHH---HHHHHHHHHHHHHHHHHHHHcCCHHH
Confidence 0112 12 2221 11122368999999999999998764
No 408
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.80 E-value=2.4e-10 Score=120.74 Aligned_cols=176 Identities=18% Similarity=0.265 Sum_probs=119.0
Q ss_pred CcEEEEEcCCCCcc---------ccCCCCcCCCCCCCEEEcccCCcCCCCCccccCCCCCceEEecCccCCCCCCcccC-
Q 005226 69 PRVVGVAISGKNVR---------GYIPSELGSLIYLRRLNLHNNNLFGSLPDQLFNATSLHSIFLYGNNLSGSLPPSVC- 138 (707)
Q Consensus 69 ~~v~~L~L~~n~l~---------~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~- 138 (707)
++++.|.|.++... +.++..+..+++|+.|+|++|.-. .++. + .+++|+.|+|..|.++......++
T Consensus 139 ~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l-~l~~-~-~~~~L~~L~L~~~~l~~~~l~~l~~ 215 (362)
T 2ra8_A 139 AHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL-SIGK-K-PRPNLKSLEIISGGLPDSVVEDILG 215 (362)
T ss_dssp TTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC-BCCS-C-BCTTCSEEEEECSBCCHHHHHHHHH
T ss_pred chhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc-eecc-c-cCCCCcEEEEecCCCChHHHHHHHH
Confidence 57888888765431 123344577899999999988311 2333 3 389999999999988743333443
Q ss_pred -CCCCccEEeccC--Cccccc-----CCCCC--cccchhhhhhhcCCcccccCCCccc--ccCCCccEEeccCCCCCCC-
Q 005226 139 -NLPRLQNLDLSN--NSFSGS-----LPDGL--KNCKQLQRLILARNKFSGQIPAGIW--PELENLVQLDLSDNDFKGP- 205 (707)
Q Consensus 139 -~l~~L~~L~Ls~--N~l~~~-----~p~~~--~~l~~L~~L~l~~N~l~~~lp~~~~--~~l~~L~~L~ls~N~l~~~- 205 (707)
.+|+|+.|+|+. |...+. +...+ ..+++|+.|+|++|.+.+..+..++ ..+++|++|+|+.|.|++.
T Consensus 216 ~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G 295 (362)
T 2ra8_A 216 SDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEG 295 (362)
T ss_dssp SBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHH
T ss_pred ccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHH
Confidence 789999999863 322111 11122 3578999999999998744333332 2578999999999999863
Q ss_pred ---CCcchhhhhccccEEEeccCcCcCCCCCcCCC-CCCccEEEccCCc
Q 005226 206 ---IPNDLGELQSLSATLNLSYNHLSGKIPKSLGN-LPVTVSFDLRGNN 250 (707)
Q Consensus 206 ---~p~~~~~l~~L~~~L~l~~N~l~~~~p~~~~~-l~~L~~l~l~~N~ 250 (707)
++..+.++++| +.|+|++|.|+...-..+.. + ...+++++|+
T Consensus 296 ~~~L~~~L~~l~~L-~~L~L~~n~i~d~~~~~l~~al--g~~~~~~~~~ 341 (362)
T 2ra8_A 296 ARLLLDHVDKIKHL-KFINMKYNYLSDEMKKELQKSL--PMKIDVSDSQ 341 (362)
T ss_dssp HHHHHTTHHHHTTC-SEEECCSBBCCHHHHHHHHHHC--CSEEECCSBC
T ss_pred HHHHHhhcccCCcc-eEEECCCCcCCHHHHHHHHHHc--CCEEEecCCc
Confidence 34455678999 79999999987433333322 2 3568888876
No 409
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.59 E-value=9.5e-10 Score=110.24 Aligned_cols=91 Identities=25% Similarity=0.241 Sum_probs=56.3
Q ss_pred cCCCCCCCE--EEcccCCcCCCCCc----cccCCCCCceEEecCccCCC--CCCcccCCCCCccEEeccCCcccccCCCC
Q 005226 89 LGSLIYLRR--LNLHNNNLFGSLPD----QLFNATSLHSIFLYGNNLSG--SLPPSVCNLPRLQNLDLSNNSFSGSLPDG 160 (707)
Q Consensus 89 l~~l~~L~~--L~L~~N~l~~~~p~----~~~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 160 (707)
|...+.|.. ++++.|+.. .++. ...++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..
T Consensus 137 l~~dp~L~~~~l~l~~N~~~-~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~ 213 (267)
T 3rw6_A 137 LRSDPDLVAQNIDVVLNRRS-CMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RE 213 (267)
T ss_dssp GGGCHHHHHTTCCCCTTSHH-HHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GG
T ss_pred cCCCcchhhcCccccCCHHH-HHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hh
Confidence 444444554 666777443 2222 22467888888888888886 4456677888888999998888853 22
Q ss_pred Ccccc--hhhhhhhcCCcccccCC
Q 005226 161 LKNCK--QLQRLILARNKFSGQIP 182 (707)
Q Consensus 161 ~~~l~--~L~~L~l~~N~l~~~lp 182 (707)
+..+. +|++|+|++|.+.+.+|
T Consensus 214 l~~l~~l~L~~L~L~~Npl~~~~~ 237 (267)
T 3rw6_A 214 LDKIKGLKLEELWLDGNSLCDTFR 237 (267)
T ss_dssp GGGGTTSCCSEEECTTSTTGGGCS
T ss_pred hhhcccCCcceEEccCCcCccccC
Confidence 33333 45555555555554444
No 410
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.58 E-value=3.6e-07 Score=95.07 Aligned_cols=131 Identities=16% Similarity=0.116 Sum_probs=98.7
Q ss_pred ceecccCeeEEEEEEeCCCceEEEEEcCCCchhhHHHHHHHHHHHHhcCC----CceeeeEEEEEcCCcceEEEEeecCC
Q 005226 413 YVLGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKH----PNIVKLRAYYWAPDEKLLISDFISNG 488 (707)
Q Consensus 413 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H----~niv~l~~~~~~~~~~~lV~e~~~~g 488 (707)
..++.|....||+. +..+++|+..... ....+.+|.++++.+.+ ..+.+++++ +..++||||++|.
T Consensus 43 ~~l~~G~~n~vy~v----g~~~vlR~~~~~~--~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvme~i~G~ 112 (320)
T 3r70_A 43 RYLSSGDDSDTFLC----NEQYVVKVPKRDS--VRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIMKYIKGE 112 (320)
T ss_dssp EEEEECSSEEEEEE----TTTEEEEEESSHH--HHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEEECCCCB
T ss_pred EeCCCCCCceEEEE----CCEEEEEeCCcHH--HHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEEeecCCc
Confidence 46889999999998 6678888764322 12568899999999866 224455554 6789999999998
Q ss_pred ChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCC---------------------------------------
Q 005226 489 NLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSP--------------------------------------- 529 (707)
Q Consensus 489 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~--------------------------------------- 529 (707)
++...... .++..++..++.++++.|..||+...
T Consensus 113 ~l~~~~~~-------~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (320)
T 3r70_A 113 RITYEQYH-------KLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLTDEM 185 (320)
T ss_dssp CCCHHHHT-------TSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCCCHHH
T ss_pred cccccccc-------cCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhcccccccc
Confidence 88744321 35677778888888888888885432
Q ss_pred ---------------------CCceecCCCCCCeEEcCCCCeEEeccccccc
Q 005226 530 ---------------------RKFVHGDIKPSNILLDNDFQPYISDFGLSRL 560 (707)
Q Consensus 530 ---------------------~~iiHrDlk~~NIll~~~~~~kl~DfGla~~ 560 (707)
..++|+|++|.||+++.+..+.|+||+.+..
T Consensus 186 ~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~ 237 (320)
T 3r70_A 186 LEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNV 237 (320)
T ss_dssp HHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEE
T ss_pred hHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCccccc
Confidence 2349999999999999976679999998864
No 411
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.50 E-value=1.1e-06 Score=89.78 Aligned_cols=141 Identities=18% Similarity=0.278 Sum_probs=93.4
Q ss_pred ceecccCeeEEEEEEeCCCceEEEEEcCCCchhhHHHHHHHHHHHHhcCCC---ceeeeEEEEEcCCcceEEEEeecCCC
Q 005226 413 YVLGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHP---NIVKLRAYYWAPDEKLLISDFISNGN 489 (707)
Q Consensus 413 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~---niv~l~~~~~~~~~~~lV~e~~~~gs 489 (707)
+.|+.|.++.||++...+|..++||+...........|.+|++.|+.+++. .+.+++++. ..++||||+++++
T Consensus 21 ~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l~g~~ 96 (288)
T 3d1u_A 21 AERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDERP 96 (288)
T ss_dssp EEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCCCC
T ss_pred eeeCCcchhheEEEEeCCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEecccCC
Confidence 368999999999999989999999997543332336789999999999765 577888763 4799999999987
Q ss_pred hHH-----------HHhCCCCC----CC------------CCCCHHHHHH---H-----------------HHHHHHHHH
Q 005226 490 LAN-----------ALRGRNGQ----PS------------TSLSWSTRLR---I-----------------AKGTARGLA 522 (707)
Q Consensus 490 L~~-----------~l~~~~~~----~~------------~~l~~~~~~~---i-----------------~~~ia~~L~ 522 (707)
+.. .||..... +. ..-+|..... + ...+-+.++
T Consensus 97 ~~~~~~~~lg~~LA~LH~~~~~~fG~~~~~~~G~~~q~~~w~~~W~~f~~~~rl~~~l~~a~~~~~~~~~~~~~~~~l~~ 176 (288)
T 3d1u_A 97 PTPEAAERFGHQLAAMHLAGAESFGATWDGYIGPLPMDNTPRSTWPEFYAEQRILPYLRRAADRGALTPGDVRLVEKVLD 176 (288)
T ss_dssp CCHHHHHHHHHHHHHHHHTCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHHTHHHHHHHHHTTSSCHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHHHcCCCCccCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHH
Confidence 531 23433211 00 0124543211 0 111112222
Q ss_pred HHh----hcCCCCceecCCCCCCeEEcCCCCeEEecccccc
Q 005226 523 YLH----ECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSR 559 (707)
Q Consensus 523 yLH----~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~ 559 (707)
.+. ...+..++|+|+.+.||+++.+ .+.|.|| .+.
T Consensus 177 ~l~~~l~~~~~~~l~HgD~~~~N~l~~~~-~~~~iD~-~~~ 215 (288)
T 3d1u_A 177 ALDHLAGDPEPPARIHGDLWNGNVLWQDD-GAVVIDP-AAH 215 (288)
T ss_dssp THHHHTCSCCCCEEECSCCSGGGEEEETT-EEEECSC-CCE
T ss_pred HHHHHhcCCCCCcceECCCCcCcEEEeCC-CeEEEcC-CcC
Confidence 232 1223679999999999999884 5889999 653
No 412
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.44 E-value=1.9e-06 Score=88.94 Aligned_cols=134 Identities=19% Similarity=0.134 Sum_probs=95.2
Q ss_pred eecccCeeEEEEEEeCCCceEEEEEcCCCchhhHHHHHHHHHHHHhcCCC---ceeeeEEEEE-cCCcceEEEEeecCCC
Q 005226 414 VLGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHP---NIVKLRAYYW-APDEKLLISDFISNGN 489 (707)
Q Consensus 414 ~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~---niv~l~~~~~-~~~~~~lV~e~~~~gs 489 (707)
.++.|....||+. +..+++|+-.. ......+.+|+++|+.+.+. .+.+.+.++. ..+..++||||++|.+
T Consensus 26 ~l~~G~~n~v~~v----g~~~VlR~~~~--~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G~~ 99 (306)
T 3tdw_A 26 SLGEGFRNYAILV----NGDWVFRFPKS--QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQGQI 99 (306)
T ss_dssp EEEECSSEEEEEE----TTTEEEEEESS--HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCSEE
T ss_pred ecCCCcceeEEEE----CCEEEEEecCC--chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCCeE
Confidence 5778888899988 56788888432 22346788999999999652 3566777774 4556789999999988
Q ss_pred hHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcC-----------------------------------------
Q 005226 490 LANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECS----------------------------------------- 528 (707)
Q Consensus 490 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~----------------------------------------- 528 (707)
+.+..-. .++..++..++.++++.|..||+..
T Consensus 100 l~~~~~~-------~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l 172 (306)
T 3tdw_A 100 LGEDGMA-------VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYL 172 (306)
T ss_dssp CHHHHHT-------TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHH
T ss_pred Cchhhhh-------hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHH
Confidence 8764321 2445555666666666666666421
Q ss_pred ----------------CCCceecCCCCCCeEEcC---CCC-eEEeccccccc
Q 005226 529 ----------------PRKFVHGDIKPSNILLDN---DFQ-PYISDFGLSRL 560 (707)
Q Consensus 529 ----------------~~~iiHrDlk~~NIll~~---~~~-~kl~DfGla~~ 560 (707)
+..++|+|+++.||+++. ++. +.|+||+.+..
T Consensus 173 ~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 173 TLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 235699999999999987 455 48999997753
No 413
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.40 E-value=9.2e-09 Score=97.96 Aligned_cols=94 Identities=20% Similarity=0.218 Sum_probs=52.8
Q ss_pred CCCCcCCCCCCCEEEcccC-CcCCC----CCccccCCCCCceEEecCccCCCC----CCcccCCCCCccEEeccCCcccc
Q 005226 85 IPSELGSLIYLRRLNLHNN-NLFGS----LPDQLFNATSLHSIFLYGNNLSGS----LPPSVCNLPRLQNLDLSNNSFSG 155 (707)
Q Consensus 85 ~~~~l~~l~~L~~L~L~~N-~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~ 155 (707)
+...+...++|++|+|++| .|... +...+...++|++|+|++|+|... +...+...++|++|+|++|.|..
T Consensus 28 l~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~ 107 (185)
T 1io0_A 28 LKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISG 107 (185)
T ss_dssp HHHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCH
T ss_pred HHHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCH
Confidence 3444566677777777777 66532 334455567777777777777621 23334445667777777777663
Q ss_pred c----CCCCCcccchhhhhhh--cCCccc
Q 005226 156 S----LPDGLKNCKQLQRLIL--ARNKFS 178 (707)
Q Consensus 156 ~----~p~~~~~l~~L~~L~l--~~N~l~ 178 (707)
. +...+...++|++|+| ++|.|.
T Consensus 108 ~g~~~l~~~L~~n~~L~~L~L~~~~N~i~ 136 (185)
T 1io0_A 108 SGILALVEALQSNTSLIELRIDNQSQPLG 136 (185)
T ss_dssp HHHHHHHHGGGGCSSCCEEECCCCSSCCC
T ss_pred HHHHHHHHHHHhCCCceEEEecCCCCCCC
Confidence 2 2233333444444444 444443
No 414
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.39 E-value=1.3e-06 Score=88.41 Aligned_cols=133 Identities=16% Similarity=0.182 Sum_probs=96.8
Q ss_pred ecccCee-EEEEEEeC-CCceEEEEEcCCCchhhHHHHHHHHHHHHhcC-CCceeeeEEEEEcCCcceEEEEeecCCChH
Q 005226 415 LGKSGLG-IVYKVVLG-NGIPVAVRRLGEGGEQRHREFVTEVQAIAKVK-HPNIVKLRAYYWAPDEKLLISDFISNGNLA 491 (707)
Q Consensus 415 lG~G~~g-~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~lV~e~~~~gsL~ 491 (707)
+..|..| .||+.... ++..+++|+-... ...++.+|..+|+.+. +--+.++++++.+++..++|||++++.++.
T Consensus 32 ~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~---~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~~ 108 (272)
T 4gkh_A 32 DNVGQSGATIYRLYGKPNAPELFLKHGKGS---VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTAF 108 (272)
T ss_dssp EECSSSSCEEEEEECCTTCCCEEEEEEETH---HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEHH
T ss_pred ccCCCcCCeEEEEEecCCCeEEEEEECCCC---CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCcccc
Confidence 4445444 78988764 4567888875432 3356888999998883 334678899999999999999999998887
Q ss_pred HHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcC-------------------------------------------
Q 005226 492 NALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECS------------------------------------------- 528 (707)
Q Consensus 492 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~------------------------------------------- 528 (707)
+...... .....++.+++..|..||+..
T Consensus 109 ~~~~~~~---------~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (272)
T 4gkh_A 109 QVLEEYP---------DSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQV 179 (272)
T ss_dssp HHHHHCG---------GGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHH
T ss_pred ccccCCH---------HHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHH
Confidence 7654321 223456667777777777521
Q ss_pred ------------CCCceecCCCCCCeEEcCCCCeEEecccccc
Q 005226 529 ------------PRKFVHGDIKPSNILLDNDFQPYISDFGLSR 559 (707)
Q Consensus 529 ------------~~~iiHrDlk~~NIll~~~~~~kl~DfGla~ 559 (707)
+..++|+|+.+.||++++++.+-|+||+.+.
T Consensus 180 ~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~ 222 (272)
T 4gkh_A 180 WKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVG 222 (272)
T ss_dssp HHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred HHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECcccc
Confidence 1137999999999999988777899999764
No 415
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.33 E-value=2.3e-08 Score=95.17 Aligned_cols=94 Identities=16% Similarity=0.190 Sum_probs=57.0
Q ss_pred CCccccCCCCCceEEecCc-cCCCC----CCcccCCCCCccEEeccCCccccc----CCCCCcccchhhhhhhcCCcccc
Q 005226 109 LPDQLFNATSLHSIFLYGN-NLSGS----LPPSVCNLPRLQNLDLSNNSFSGS----LPDGLKNCKQLQRLILARNKFSG 179 (707)
Q Consensus 109 ~p~~~~~l~~L~~L~L~~N-~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~~ 179 (707)
+...+...++|++|+|++| .|... +...+...++|++|+|++|.|... +...+...++|++|+|++|+|..
T Consensus 28 l~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~ 107 (185)
T 1io0_A 28 LKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISG 107 (185)
T ss_dssp HHHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCH
T ss_pred HHHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCH
Confidence 3445667889999999999 88732 344566778899999999988632 22233344556666666666652
Q ss_pred c----CCCcccccCCCccEEec--cCCCCC
Q 005226 180 Q----IPAGIWPELENLVQLDL--SDNDFK 203 (707)
Q Consensus 180 ~----lp~~~~~~l~~L~~L~l--s~N~l~ 203 (707)
. +... +...++|++|+| ++|.|.
T Consensus 108 ~g~~~l~~~-L~~n~~L~~L~L~~~~N~i~ 136 (185)
T 1io0_A 108 SGILALVEA-LQSNTSLIELRIDNQSQPLG 136 (185)
T ss_dssp HHHHHHHHG-GGGCSSCCEEECCCCSSCCC
T ss_pred HHHHHHHHH-HHhCCCceEEEecCCCCCCC
Confidence 1 1111 233445556666 555554
No 416
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.23 E-value=2.3e-06 Score=90.36 Aligned_cols=78 Identities=6% Similarity=-0.050 Sum_probs=55.3
Q ss_pred ee-cccCeeEEEEEEeC-------CCceEEEEEcCCCc---hhhHHHHHHHHHHHHhcC-C--CceeeeEEEEEcC---C
Q 005226 414 VL-GKSGLGIVYKVVLG-------NGIPVAVRRLGEGG---EQRHREFVTEVQAIAKVK-H--PNIVKLRAYYWAP---D 476 (707)
Q Consensus 414 ~l-G~G~~g~Vy~~~~~-------~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~-H--~niv~l~~~~~~~---~ 476 (707)
.| +.|....+|+.... ++..+++|...... ......+.+|+.+++.+. + -.+.++++++.+. +
T Consensus 27 ~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~g 106 (357)
T 3ats_A 27 GVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVLG 106 (357)
T ss_dssp EECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTTS
T ss_pred ECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCccC
Confidence 56 78888999998764 26778888865432 111245788999998884 3 3567788887655 3
Q ss_pred cceEEEEeecCCChH
Q 005226 477 EKLLISDFISNGNLA 491 (707)
Q Consensus 477 ~~~lV~e~~~~gsL~ 491 (707)
..++||||++|..+.
T Consensus 107 ~~~~v~e~l~G~~l~ 121 (357)
T 3ats_A 107 TPFFLMDYVEGVVPP 121 (357)
T ss_dssp SCEEEEECCCCBCCC
T ss_pred CceEEEEecCCCChh
Confidence 568999999886654
No 417
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.21 E-value=6.1e-06 Score=87.18 Aligned_cols=141 Identities=16% Similarity=0.187 Sum_probs=89.6
Q ss_pred eecccCeeEEEEEEeCCCceEEEEEcCCCchhhHHHHHHHHHHHHhcCCCc--eeeeEEEEEcC-CcceEEEEeecCCCh
Q 005226 414 VLGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPN--IVKLRAYYWAP-DEKLLISDFISNGNL 490 (707)
Q Consensus 414 ~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~n--iv~l~~~~~~~-~~~~lV~e~~~~gsL 490 (707)
.++.|....+|+... ++..+++|..... ..+.+|+.+++.+.... +.++++++... +..++||||+++.++
T Consensus 48 ~l~gG~~n~~y~v~~-~g~~~vlK~~~~~-----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l~G~~l 121 (362)
T 3ovc_A 48 QLSEGEESRAFSFDV-GGRGYVLRVNSCA-----DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQGVTL 121 (362)
T ss_dssp EEEECSSEEEEEEEE-TTEEEEEEEESCC-----HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECCCSEET
T ss_pred ECCCCCcceEEEEEE-CCcEEEEEeCCch-----hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEecCCCCc
Confidence 578899999999886 5778889887543 35788999999886533 56677777665 567999999997655
Q ss_pred HH------------------HHhCCCCCC---------------------------CCCCCHHHH------HHHHHHHHH
Q 005226 491 AN------------------ALRGRNGQP---------------------------STSLSWSTR------LRIAKGTAR 519 (707)
Q Consensus 491 ~~------------------~l~~~~~~~---------------------------~~~l~~~~~------~~i~~~ia~ 519 (707)
.+ .||...... .....|... ......+..
T Consensus 122 ~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~gl~~~~~~~~~~~~~w~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 201 (362)
T 3ovc_A 122 QDLPETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQTVMDDTVSASVAQALDE 201 (362)
T ss_dssp TTSCGGGSGGGHHHHHHHHHHHHHCCCTTCBCEEEECTTSBEEESSHHHHHHGGGCTTTCCHHHHCCTTTHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHHHHHHHHHhcCCCccccCccCCCCCCCCccccHHHHHHHHHHHHHHHHHHHHhhcccccchHHHHH
Confidence 32 122211000 000112111 111122222
Q ss_pred HHHHHhhcC-CCCceecCCCCCCeEEcCCCCeEEeccccccc
Q 005226 520 GLAYLHECS-PRKFVHGDIKPSNILLDNDFQPYISDFGLSRL 560 (707)
Q Consensus 520 ~L~yLH~~~-~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~ 560 (707)
.++++.... ...++|+|+.+.||+++++..+.|+||+.+..
T Consensus 202 l~~~l~~lp~~~~l~HgDl~~~Nil~~~~~~~~viD~~~~~~ 243 (362)
T 3ovc_A 202 LMLWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAMF 243 (362)
T ss_dssp HHHHGGGCCCCCEEECSSCSSTTEEEETTEEEEECCCTTCEE
T ss_pred HHHHHhhCCCCcEEEeCCCCCCeEEEeCCCEEEEECCccccc
Confidence 333342211 14689999999999998877788999998764
No 418
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=98.15 E-value=5.6e-06 Score=88.67 Aligned_cols=153 Identities=14% Similarity=0.108 Sum_probs=105.5
Q ss_pred CCcCCCCCCCEEEcccCCcCCCCCccccCCCCCceEEecCccCCCCCCcccCCCCCccEEeccCCcccccCCCCCcccch
Q 005226 87 SELGSLIYLRRLNLHNNNLFGSLPDQLFNATSLHSIFLYGNNLSGSLPPSVCNLPRLQNLDLSNNSFSGSLPDGLKNCKQ 166 (707)
Q Consensus 87 ~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 166 (707)
......++|+.+.+..+ ++.+-...|.++.+|+.+.+..|... .....|..+..|+.+.+..+.+. ...|.++.+
T Consensus 224 ~~~~~~~~l~~i~ip~~-~~~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i~---~~~F~~~~~ 298 (394)
T 4fs7_A 224 DFALSKTGVKNIIIPDS-FTELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIVP---EKTFYGCSS 298 (394)
T ss_dssp TTTTTTCCCCEEEECTT-CCEECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEEC---TTTTTTCTT
T ss_pred hhhcccCCCceEEECCC-ceecccccccccccceeEEcCCCcce-eeccccccccccceeccCceeec---ccccccccc
Confidence 33445567777777644 33344556777888888888777655 56667777778887777765432 346777778
Q ss_pred hhhhhhcCCcccccCCCcccccCCCccEEeccCCCCCCCCCcchhhhhccccEEEeccCcCcCCCCCcCCCCCCccEEEc
Q 005226 167 LQRLILARNKFSGQIPAGIWPELENLVQLDLSDNDFKGPIPNDLGELQSLSATLNLSYNHLSGKIPKSLGNLPVTVSFDL 246 (707)
Q Consensus 167 L~~L~l~~N~l~~~lp~~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~L~l~~N~l~~~~p~~~~~l~~L~~l~l 246 (707)
|+.+.+..+ ++ .|+...|.++.+|+.++|.++ ++..-..+|.++++| +.+.+..| ++..-..+|.++++|+.+++
T Consensus 299 L~~i~l~~~-i~-~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L-~~i~lp~~-l~~I~~~aF~~C~~L~~i~l 373 (394)
T 4fs7_A 299 LTEVKLLDS-VK-FIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSL-SNINFPLS-LRKIGANAFQGCINLKKVEL 373 (394)
T ss_dssp CCEEEECTT-CC-EECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTC-CEECCCTT-CCEECTTTBTTCTTCCEEEE
T ss_pred ccccccccc-cc-eechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCC-CEEEECcc-ccEehHHHhhCCCCCCEEEE
Confidence 887777654 55 677777778888888888644 664556677788888 67887766 66455667788888888877
Q ss_pred cCC
Q 005226 247 RGN 249 (707)
Q Consensus 247 ~~N 249 (707)
..|
T Consensus 374 p~~ 376 (394)
T 4fs7_A 374 PKR 376 (394)
T ss_dssp EGG
T ss_pred CCC
Confidence 644
No 419
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=98.13 E-value=2.8e-06 Score=90.98 Aligned_cols=173 Identities=14% Similarity=0.118 Sum_probs=130.9
Q ss_pred CcEEEEEcCCCCccccCCCCcCCCCCCCEEEcccCCcCCCCCccccCCCCCceEEecCccC-------------------
Q 005226 69 PRVVGVAISGKNVRGYIPSELGSLIYLRRLNLHNNNLFGSLPDQLFNATSLHSIFLYGNNL------------------- 129 (707)
Q Consensus 69 ~~v~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l------------------- 129 (707)
.+++.+.|.++ +..+-...|.++++|+.+.+..| ++.+-...|.++..|+.+.+..+..
T Consensus 162 ~~L~~i~l~~~-~~~I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~~~~~~i~~~~~~~~~l~~i~ip~ 239 (394)
T 4fs7_A 162 ESLEYVSLPDS-METLHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENMEFPNSLYYLGDFALSKTGVKNIIIPD 239 (394)
T ss_dssp TTCCEEECCTT-CCEECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCCCCTTCCEECTTTTTTCCCCEEEECT
T ss_pred CCCcEEecCCc-cceeccccccCCCCceEEEcCCC-ceEeCchhhccccccceeecCCCceEeehhhcccCCCceEEECC
Confidence 46888888755 44466778888999999988776 4445555666666666666554322
Q ss_pred --CCCCCcccCCCCCccEEeccCCcccccCCCCCcccchhhhhhhcCCcccccCCCcccccCCCccEEeccCCCCCCCCC
Q 005226 130 --SGSLPPSVCNLPRLQNLDLSNNSFSGSLPDGLKNCKQLQRLILARNKFSGQIPAGIWPELENLVQLDLSDNDFKGPIP 207 (707)
Q Consensus 130 --~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~lp~~~~~~l~~L~~L~ls~N~l~~~~p 207 (707)
+..-...|..+.+|+.+.+..|... .....|.++..|+.+.+..+. ++...|..+.+|+.+.+.+| ++....
T Consensus 240 ~~~~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~----i~~~~F~~~~~L~~i~l~~~-i~~I~~ 313 (394)
T 4fs7_A 240 SFTELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVI----VPEKTFYGCSSLTEVKLLDS-VKFIGE 313 (394)
T ss_dssp TCCEECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSE----ECTTTTTTCTTCCEEEECTT-CCEECT
T ss_pred CceecccccccccccceeEEcCCCcce-eeccccccccccceeccCcee----eccccccccccccccccccc-cceech
Confidence 1122346778899999999988765 667789999999988887654 56677889999999999766 665667
Q ss_pred cchhhhhccccEEEeccCcCcCCCCCcCCCCCCccEEEccCCcCc
Q 005226 208 NDLGELQSLSATLNLSYNHLSGKIPKSLGNLPVTVSFDLRGNNLS 252 (707)
Q Consensus 208 ~~~~~l~~L~~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~ 252 (707)
.+|.++++| +.++|.++ ++..-..+|.++.+|+.+++..| ++
T Consensus 314 ~aF~~c~~L-~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~ 355 (394)
T 4fs7_A 314 EAFESCTSL-VSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LR 355 (394)
T ss_dssp TTTTTCTTC-CEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CC
T ss_pred hhhcCCCCC-CEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-cc
Confidence 789999999 79999755 77566789999999999999876 55
No 420
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=98.07 E-value=7.8e-06 Score=87.52 Aligned_cols=113 Identities=11% Similarity=0.263 Sum_probs=87.8
Q ss_pred CcccCCCCCccEEeccCCcccccCCCCCcccchhhhhhhcCCcccccCCCcccccCCCccEEeccCCCCCCCCCcchhhh
Q 005226 134 PPSVCNLPRLQNLDLSNNSFSGSLPDGLKNCKQLQRLILARNKFSGQIPAGIWPELENLVQLDLSDNDFKGPIPNDLGEL 213 (707)
Q Consensus 134 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~lp~~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l 213 (707)
..+|.++.+|+.+.+.++..+ .-...|.++++|+.+.+. +.++ .|+...|.++.+|+.++|..| ++.....+|.++
T Consensus 258 ~~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~-~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C 333 (394)
T 4gt6_A 258 THAFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRIT-ELPESVFAGCISLKSIDIPEG-ITQILDDAFAGC 333 (394)
T ss_dssp TTTTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCC-EECTTTTTTCTTCCEEECCTT-CCEECTTTTTTC
T ss_pred cceeeecccccEEecccccce-ecCcccccccccccccCC-Cccc-ccCceeecCCCCcCEEEeCCc-ccEehHhHhhCC
Confidence 345778888999988776554 556778888899988885 5566 788888888999999998765 665556788888
Q ss_pred hccccEEEeccCcCcCCCCCcCCCCCCccEEEccCCcCc
Q 005226 214 QSLSATLNLSYNHLSGKIPKSLGNLPVTVSFDLRGNNLS 252 (707)
Q Consensus 214 ~~L~~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~ 252 (707)
.+| +.+.|..+ ++..-..+|.++++|+.+++.+|...
T Consensus 334 ~~L-~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~~ 370 (394)
T 4gt6_A 334 EQL-ERIAIPSS-VTKIPESAFSNCTALNNIEYSGSRSQ 370 (394)
T ss_dssp TTC-CEEEECTT-CCBCCGGGGTTCTTCCEEEESSCHHH
T ss_pred CCC-CEEEECcc-cCEEhHhHhhCCCCCCEEEECCceee
Confidence 888 78888654 66455678888999999998887654
No 421
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=98.05 E-value=1.6e-05 Score=85.06 Aligned_cols=108 Identities=10% Similarity=0.243 Sum_probs=80.0
Q ss_pred CCCCcccchhhhhhhcCCcccccCCCcccccCCCccEEeccCCCCCCCCCcchhhhhccccEEEeccCcCcCCCCCcCCC
Q 005226 158 PDGLKNCKQLQRLILARNKFSGQIPAGIWPELENLVQLDLSDNDFKGPIPNDLGELQSLSATLNLSYNHLSGKIPKSLGN 237 (707)
Q Consensus 158 p~~~~~l~~L~~L~l~~N~l~~~lp~~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~L~l~~N~l~~~~p~~~~~ 237 (707)
..+|.++.+|+.+.+..+.. .|....|..+.+|+.+.+. +.++......|.++.+| +.+.|..| ++..-..+|.+
T Consensus 258 ~~aF~~c~~L~~i~lp~~~~--~I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L-~~i~lp~~-v~~I~~~aF~~ 332 (394)
T 4gt6_A 258 THAFDSCAYLASVKMPDSVV--SIGTGAFMNCPALQDIEFS-SRITELPESVFAGCISL-KSIDIPEG-ITQILDDAFAG 332 (394)
T ss_dssp TTTTTTCSSCCEEECCTTCC--EECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTC-CEEECCTT-CCEECTTTTTT
T ss_pred cceeeecccccEEecccccc--eecCcccccccccccccCC-CcccccCceeecCCCCc-CEEEeCCc-ccEehHhHhhC
Confidence 34678889999999976654 5888889999999999996 55665666789999999 79999865 66566788999
Q ss_pred CCCccEEEccCCcCcccCCCCCCC---CCCCCcccCCCC
Q 005226 238 LPVTVSFDLRGNNLSGEIPQTGSF---ANQGPTAFLSNP 273 (707)
Q Consensus 238 l~~L~~l~l~~N~l~~~~p~~~~~---~~~~~~~~~~N~ 273 (707)
+.+|+.+.+..+ ++ .|.. ..| .+|..+.+.+|.
T Consensus 333 C~~L~~i~ip~s-v~-~I~~-~aF~~C~~L~~i~~~~~~ 368 (394)
T 4gt6_A 333 CEQLERIAIPSS-VT-KIPE-SAFSNCTALNNIEYSGSR 368 (394)
T ss_dssp CTTCCEEEECTT-CC-BCCG-GGGTTCTTCCEEEESSCH
T ss_pred CCCCCEEEECcc-cC-EEhH-hHhhCCCCCCEEEECCce
Confidence 999999999755 44 2321 122 345555565553
No 422
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.95 E-value=2.9e-05 Score=81.09 Aligned_cols=141 Identities=18% Similarity=0.263 Sum_probs=80.2
Q ss_pred eecccCeeEEEEEEeCCCceEEEEEcCCCchhhHHHHHHHHHHHHhcC-----CCceeeeE-E--EEEcCCcceEEEEee
Q 005226 414 VLGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVK-----HPNIVKLR-A--YYWAPDEKLLISDFI 485 (707)
Q Consensus 414 ~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----H~niv~l~-~--~~~~~~~~~lV~e~~ 485 (707)
.|+.|..+.||+....+|. +++|+.... . .++..|+.+++.+. .|.++... | +....+..++||+|+
T Consensus 39 ~l~gG~~n~~~~v~~~~~~-~vlk~~~~~-~---~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~i 113 (346)
T 2q83_A 39 VIQGNQMALVWKVHTDSGA-VCLKRIHRP-E---KKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDWI 113 (346)
T ss_dssp ECC----CEEEEEEETTEE-EEEEEECSC-H---HHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEECC
T ss_pred eccccccCcEEEEEeCCCC-EEEEecCCC-H---HHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEee
Confidence 4566778899999886654 888988752 1 23344555555542 34444310 0 122356678999999
Q ss_pred cCCChH--------------HHHhCCCC-C--C------CCCCCHHHHH-------------------------------
Q 005226 486 SNGNLA--------------NALRGRNG-Q--P------STSLSWSTRL------------------------------- 511 (707)
Q Consensus 486 ~~gsL~--------------~~l~~~~~-~--~------~~~l~~~~~~------------------------------- 511 (707)
+|.++. ..+|.... - + ...-.|....
T Consensus 114 ~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 193 (346)
T 2q83_A 114 EGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEID 193 (346)
T ss_dssp CCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHHH
T ss_pred cCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHH
Confidence 986542 11221110 0 0 0112343211
Q ss_pred HHHHHHHHHHHHHhh----------cCCCCceecCCCCCCeEEcCCCCeEEecccccc
Q 005226 512 RIAKGTARGLAYLHE----------CSPRKFVHGDIKPSNILLDNDFQPYISDFGLSR 559 (707)
Q Consensus 512 ~i~~~ia~~L~yLH~----------~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~ 559 (707)
.+...+..++++|+. ..+..++|+|+++.||+++.++.+.|+||+.+.
T Consensus 194 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 194 GFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp HHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred HHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 011123445667763 123689999999999999888899999999764
No 423
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=97.92 E-value=1.9e-05 Score=83.89 Aligned_cols=154 Identities=11% Similarity=0.100 Sum_probs=98.5
Q ss_pred cCCCCCCCEEEcccCCcCCCCCccccCCCCCceEEecCccCCCCCCcccCCCCCccEEeccCCcccccCCCCCcccchhh
Q 005226 89 LGSLIYLRRLNLHNNNLFGSLPDQLFNATSLHSIFLYGNNLSGSLPPSVCNLPRLQNLDLSNNSFSGSLPDGLKNCKQLQ 168 (707)
Q Consensus 89 l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 168 (707)
+.....+..+.+..+.-. .....+....+|+.+.+..+ +.......|.++.+|+.+.+..+ ++..-...|.++.+|+
T Consensus 190 ~~~~~~~~~~~~~~~~~~-i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~ 266 (379)
T 4h09_A 190 YPAAKTGTEFTIPSTVKT-VTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALK 266 (379)
T ss_dssp CCTTCCCSEEECCTTCCE-ECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCC
T ss_pred ccccccccccccccceeE-Eeecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhc
Confidence 344455555555443322 44555666777777777554 33244556677777777777655 4434456677777777
Q ss_pred hhhhcCCcccccCCCcccccCCCccEEeccCCCCCCCCCcchhhhhccccEEEeccCcCcCCCCCcCCCCCCccEEEccC
Q 005226 169 RLILARNKFSGQIPAGIWPELENLVQLDLSDNDFKGPIPNDLGELQSLSATLNLSYNHLSGKIPKSLGNLPVTVSFDLRG 248 (707)
Q Consensus 169 ~L~l~~N~l~~~lp~~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~ 248 (707)
.+.+..+ ++ .++...|..+.+|+.+.+.+|.++..-...|.++.+| +.+.|..+ ++..-..+|.++.+|+.+.+..
T Consensus 267 ~i~l~~~-i~-~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L-~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~ 342 (379)
T 4h09_A 267 TLNFYAK-VK-TVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKL-SSVTLPTA-LKTIQVYAFKNCKALSTISYPK 342 (379)
T ss_dssp EEEECCC-CS-EECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTC-CEEECCTT-CCEECTTTTTTCTTCCCCCCCT
T ss_pred ccccccc-ce-eccccccccccccccccccccccceehhhhhcCCCCC-CEEEcCcc-ccEEHHHHhhCCCCCCEEEECC
Confidence 7777543 55 6777777777778888777777775556677777777 67777644 5544456777777777776654
Q ss_pred C
Q 005226 249 N 249 (707)
Q Consensus 249 N 249 (707)
+
T Consensus 343 ~ 343 (379)
T 4h09_A 343 S 343 (379)
T ss_dssp T
T ss_pred c
Confidence 3
No 424
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.90 E-value=5e-05 Score=81.27 Aligned_cols=74 Identities=9% Similarity=0.117 Sum_probs=49.1
Q ss_pred ceecccCeeEEEEEEeC-CCceEEEEEcCCCch-------hhHHHHHHHHHHHHhcCC--Cc-eeeeEEEEEcCCcceEE
Q 005226 413 YVLGKSGLGIVYKVVLG-NGIPVAVRRLGEGGE-------QRHREFVTEVQAIAKVKH--PN-IVKLRAYYWAPDEKLLI 481 (707)
Q Consensus 413 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-------~~~~~~~~E~~~l~~l~H--~n-iv~l~~~~~~~~~~~lV 481 (707)
+.+|.|.++.||++... ++..++||....... .....+..|+++++.+.. +. +.+++.+ +.+..++|
T Consensus 36 ~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~lv 113 (397)
T 2olc_A 36 QEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVTV 113 (397)
T ss_dssp EECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEEE
T ss_pred EECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEEE
Confidence 36899999999999754 467899997543211 122456789999988742 43 4455543 45567899
Q ss_pred EEeecCC
Q 005226 482 SDFISNG 488 (707)
Q Consensus 482 ~e~~~~g 488 (707)
|||+++.
T Consensus 114 mE~l~g~ 120 (397)
T 2olc_A 114 MEDLSHL 120 (397)
T ss_dssp ECCCTTS
T ss_pred EEeCCCc
Confidence 9999764
No 425
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=97.78 E-value=5e-05 Score=80.68 Aligned_cols=165 Identities=11% Similarity=0.039 Sum_probs=124.2
Q ss_pred ccccCCCCcCCCCCCCEEEcccCCcCC------------CCCccccCCCCCceEEecCccCCCCCCcccCCCCCccEEec
Q 005226 81 VRGYIPSELGSLIYLRRLNLHNNNLFG------------SLPDQLFNATSLHSIFLYGNNLSGSLPPSVCNLPRLQNLDL 148 (707)
Q Consensus 81 l~~~~~~~l~~l~~L~~L~L~~N~l~~------------~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 148 (707)
++.+-...|..+.+|+.+.+..+.... .....+.....+..+.+..+.-. .....+....+|+.+.+
T Consensus 146 v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~~f~~~~~l~~i~~ 224 (379)
T 4h09_A 146 VTTIKDGIGYKAENLEKIEVSSNNKNYVAENYVLYNKNKTILESYPAAKTGTEFTIPSTVKT-VTAYGFSYGKNLKKITI 224 (379)
T ss_dssp CCEECSCTTTTCTTCCEEEECTTCSSEEEETTEEEETTSSEEEECCTTCCCSEEECCTTCCE-ECTTTTTTCSSCSEEEC
T ss_pred eeccccchhcccccccccccccccceeecccceecccccceeccccccccccccccccceeE-Eeecccccccccceeee
Confidence 444556778899999998887665431 12234455666666666554433 55667788899999999
Q ss_pred cCCcccccCCCCCcccchhhhhhhcCCcccccCCCcccccCCCccEEeccCCCCCCCCCcchhhhhccccEEEeccCcCc
Q 005226 149 SNNSFSGSLPDGLKNCKQLQRLILARNKFSGQIPAGIWPELENLVQLDLSDNDFKGPIPNDLGELQSLSATLNLSYNHLS 228 (707)
Q Consensus 149 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~lp~~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~~L~l~~N~l~ 228 (707)
..+ +...-...|.++.+|+.+.+..+ ++ .|....|..+.+|+.+.+..+ ++......|.++++| +.+.+.+|.++
T Consensus 225 ~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~-~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L-~~i~l~~~~i~ 299 (379)
T 4h09_A 225 TSG-VTTLGDGAFYGMKALDEIAIPKN-VT-SIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNL-TKVVMDNSAIE 299 (379)
T ss_dssp CTT-CCEECTTTTTTCSSCCEEEECTT-CC-EECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTC-CEEEECCTTCC
T ss_pred ccc-eeEEccccccCCccceEEEcCCC-cc-EeCccccceeehhcccccccc-ceecccccccccccc-ccccccccccc
Confidence 766 44355678889999999999776 66 788888999999999999755 554556788999999 79999999898
Q ss_pred CCCCCcCCCCCCccEEEccCCcCc
Q 005226 229 GKIPKSLGNLPVTVSFDLRGNNLS 252 (707)
Q Consensus 229 ~~~p~~~~~l~~L~~l~l~~N~l~ 252 (707)
..-..+|.++.+|+.+.+..+ ++
T Consensus 300 ~I~~~aF~~c~~L~~i~lp~~-l~ 322 (379)
T 4h09_A 300 TLEPRVFMDCVKLSSVTLPTA-LK 322 (379)
T ss_dssp EECTTTTTTCTTCCEEECCTT-CC
T ss_pred eehhhhhcCCCCCCEEEcCcc-cc
Confidence 666788999999999999755 44
No 426
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.68 E-value=0.00016 Score=74.32 Aligned_cols=138 Identities=14% Similarity=0.130 Sum_probs=92.1
Q ss_pred eecccCeeEEEEEEeCCCceEEEEEcCCCchhhHHHHHHHHHHHHhcC---CCceeeeEEEEEcCCcceEEEEeecCCCh
Q 005226 414 VLGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVK---HPNIVKLRAYYWAPDEKLLISDFISNGNL 490 (707)
Q Consensus 414 ~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---H~niv~l~~~~~~~~~~~lV~e~~~~gsL 490 (707)
.|+.|.+..+|+... ++..+++|+.... ....|.+|++.|+.|. ...+.++++++...+..++||||+++..+
T Consensus 43 ~l~gG~~n~~y~v~~-~~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~~~ 118 (312)
T 3jr1_A 43 KLYSGEMNEIWLIND-EVQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKSKN 118 (312)
T ss_dssp EECCSSSSEEEEEES-SSCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCCCC
T ss_pred EeCCccceeeeEEEE-CCCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCCCC
Confidence 578899999999986 4667888886542 2467889999998883 35688899888888889999999998764
Q ss_pred H-----------HHHhCCCCCCC-----------------CCCCHHHHH---HHHH----------------HHHH-HHH
Q 005226 491 A-----------NALRGRNGQPS-----------------TSLSWSTRL---RIAK----------------GTAR-GLA 522 (707)
Q Consensus 491 ~-----------~~l~~~~~~~~-----------------~~l~~~~~~---~i~~----------------~ia~-~L~ 522 (707)
. ..||.....+. ..-+|.... ++.. .+.. ...
T Consensus 119 ~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~~l~~ 198 (312)
T 3jr1_A 119 KQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQIVAD 198 (312)
T ss_dssp CTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHHHHHH
T ss_pred CchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHH
Confidence 2 13343321000 012565432 1111 1111 122
Q ss_pred HHhh-cCCCCceecCCCCCCeEEcCCCCeEEeccc
Q 005226 523 YLHE-CSPRKFVHGDIKPSNILLDNDFQPYISDFG 556 (707)
Q Consensus 523 yLH~-~~~~~iiHrDlk~~NIll~~~~~~kl~DfG 556 (707)
.|.. ...+.++|+|+.+.|++++.++ +.|.|+.
T Consensus 199 ~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 199 TLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 3421 1236799999999999999887 8899974
No 427
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.57 E-value=0.00035 Score=75.21 Aligned_cols=80 Identities=13% Similarity=0.112 Sum_probs=48.2
Q ss_pred CCceecCCCCCCeEEcCCCCeEEecccccccccccCCCCCCCCCCcCCCCCCCCccccccCccccCCCCCCC--CCCCCc
Q 005226 530 RKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVP--GNRPMQ 607 (707)
Q Consensus 530 ~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~ 607 (707)
..++|+|+++.||+++.++ ++|+||+.+..-...-+... ....-...|.+|+.... +.....
T Consensus 232 ~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~Dla~---------------~l~~~~~~~~~~~~~~~~~~~~~~~ 295 (420)
T 2pyw_A 232 QALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFDIGA---------------YLGNLILAFFAQDGHATQENDRKEY 295 (420)
T ss_dssp CEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHHHHH---------------HHHHHHHHHHHGGGGCCSSCCSHHH
T ss_pred CeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHHHHH---------------HHHHHHHHHHhcccccccccchHHH
Confidence 7899999999999998876 99999998764321100000 00000123555554321 011223
Q ss_pred hhhHHHHHHHHHHHHhCC
Q 005226 608 KWDVYSFGVVLLELLTGK 625 (707)
Q Consensus 608 ~~DV~S~Gv~l~elltg~ 625 (707)
..++.+....+|+.++++
T Consensus 296 ~~~~~~~~~~~~~~y~~~ 313 (420)
T 2pyw_A 296 KQWILRTIEQTWNLFNKR 313 (420)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 456678888888888764
No 428
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.55 E-value=0.00045 Score=70.18 Aligned_cols=72 Identities=18% Similarity=0.322 Sum_probs=54.0
Q ss_pred eecccCeeEEEEEEeCCCceEEEEEcCCCchhhHHHHHHHHHHHHhcC-C--CceeeeEEEEEcCCcceEEEEeecCCC
Q 005226 414 VLGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVK-H--PNIVKLRAYYWAPDEKLLISDFISNGN 489 (707)
Q Consensus 414 ~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H--~niv~l~~~~~~~~~~~lV~e~~~~gs 489 (707)
.+|.|..+.||+.++.+|+.|++|+-..........|.+|++.|+.|. . --+.+++++ +..++||||++++.
T Consensus 22 ~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~----~~~~lv~e~l~~~~ 96 (288)
T 3f7w_A 22 ERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGW----DDRTLAMEWVDERP 96 (288)
T ss_dssp EEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEE----ETTEEEEECCCCCC
T ss_pred ecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEec----cCceEEEEeecccC
Confidence 589999999999999999999999876544333356889999999884 2 124455544 24589999988764
No 429
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.39 E-value=2.8e-05 Score=72.20 Aligned_cols=84 Identities=12% Similarity=0.141 Sum_probs=56.2
Q ss_pred CcEEEEEcCCCCccccCCCCcCCCCCCCEEEcccCC-cCCCCCccccCC----CCCceEEecCc-cCCCCCCcccCCCCC
Q 005226 69 PRVVGVAISGKNVRGYIPSELGSLIYLRRLNLHNNN-LFGSLPDQLFNA----TSLHSIFLYGN-NLSGSLPPSVCNLPR 142 (707)
Q Consensus 69 ~~v~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~-l~~~~p~~~~~l----~~L~~L~L~~N-~l~~~~p~~~~~l~~ 142 (707)
-+++.|||+++.|+..--..+..+++|++|+|+++. |+..--..+..+ ++|++|+|+++ +|+..--..+..+++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 468888888888776555567788888888888884 553222234443 36888888886 466332334566777
Q ss_pred ccEEeccCCc
Q 005226 143 LQNLDLSNNS 152 (707)
Q Consensus 143 L~~L~Ls~N~ 152 (707)
|+.|+|++..
T Consensus 141 L~~L~L~~c~ 150 (176)
T 3e4g_A 141 LKYLFLSDLP 150 (176)
T ss_dssp CCEEEEESCT
T ss_pred CCEEECCCCC
Confidence 7777777654
No 430
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.28 E-value=2e-05 Score=73.21 Aligned_cols=35 Identities=9% Similarity=0.062 Sum_probs=20.1
Q ss_pred CCCCEEEcccCCcCCCCCccccCCCCCceEEecCc
Q 005226 93 IYLRRLNLHNNNLFGSLPDQLFNATSLHSIFLYGN 127 (707)
Q Consensus 93 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 127 (707)
.+|+.|||+++.|+..--..+.++++|+.|+|+++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C 95 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKC 95 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESC
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCC
Confidence 35677777776665332233455666666666665
No 431
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=97.28 E-value=0.0017 Score=67.03 Aligned_cols=142 Identities=15% Similarity=0.096 Sum_probs=80.8
Q ss_pred eecccCeeEEEEEEeCCCceEEEEEcCCCchhhHHHHHHHHHHHHhcCCC--ceeeeEEE-----EEcCCcceEEEEeec
Q 005226 414 VLGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHP--NIVKLRAY-----YWAPDEKLLISDFIS 486 (707)
Q Consensus 414 ~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~--niv~l~~~-----~~~~~~~~lV~e~~~ 486 (707)
.++ |....||+....+|..+++|....... ....+..|..+++.+... .+.+++.. ....+..++||+|++
T Consensus 33 ~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~~-~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~i~ 110 (328)
T 1zyl_A 33 PLN-SYENRVYQFQDEDRRRFVVKFYRPERW-TADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVG 110 (328)
T ss_dssp EEC-CSSSEEEEECCTTCCCEEEEEECTTTS-CHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCC
T ss_pred eec-CcccceEEEEcCCCCEEEEEEcCCCCC-CHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEEecC
Confidence 355 777899998877787899999864321 224566788888877422 23444432 112345578999998
Q ss_pred CCChH-----H---------HHhCC----CCCCCCCCCHHHH----HHH---------------HHHHHHHHHHHhhc--
Q 005226 487 NGNLA-----N---------ALRGR----NGQPSTSLSWSTR----LRI---------------AKGTARGLAYLHEC-- 527 (707)
Q Consensus 487 ~gsL~-----~---------~l~~~----~~~~~~~l~~~~~----~~i---------------~~~ia~~L~yLH~~-- 527 (707)
|..+. . .+|.. .......+++... ..+ ...+...++.+...
T Consensus 111 G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 190 (328)
T 1zyl_A 111 GRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHWR 190 (328)
T ss_dssp CEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHHCC
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHHHHhh
Confidence 75432 0 12211 0000112233221 001 11111223333221
Q ss_pred --CCCCceecCCCCCCeEEcCCCCeEEecccccc
Q 005226 528 --SPRKFVHGDIKPSNILLDNDFQPYISDFGLSR 559 (707)
Q Consensus 528 --~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~ 559 (707)
.+..++|+|+++.||+++ + .+.|+||+.+.
T Consensus 191 ~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~ 222 (328)
T 1zyl_A 191 EDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDAR 222 (328)
T ss_dssp SCSCCEECCSSCSGGGEEES-S-SEEECCCTTCC
T ss_pred hcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCC
Confidence 235689999999999999 4 89999999765
No 432
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.22 E-value=0.0019 Score=66.55 Aligned_cols=143 Identities=10% Similarity=0.066 Sum_probs=80.0
Q ss_pred eecccCeeEEEEEEeCCCceEEEEEcCCCchhhHHHHHHHHHHHHhcCCCc--eeeeEEE------EEcCCcceEEEEee
Q 005226 414 VLGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPN--IVKLRAY------YWAPDEKLLISDFI 485 (707)
Q Consensus 414 ~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~n--iv~l~~~------~~~~~~~~lV~e~~ 485 (707)
.|+.|....+|+....+| .+++|...... ....+..|+.+++.+.... +.+++.. ....+..++|++|+
T Consensus 29 ~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~--~~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~~~~g~~~~l~~~l 105 (322)
T 2ppq_A 29 GIAEGVENSNFLLHTTKD-PLILTLYEKRV--EKNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGRPAALISFL 105 (322)
T ss_dssp EECC---EEEEEEEESSC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTEEEEEEECC
T ss_pred ccCCCcccceEEEEeCCc-cEEEEEeCCCC--CHHHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEEEECCEEEEEEEeC
Confidence 467788889999988666 67888876531 1134566788777763212 2333311 12235568999999
Q ss_pred cCCChHH--------------HHhCCC---CCCC-C---CCCHHHHHHH------------HHHHHHHHHHHhhc----C
Q 005226 486 SNGNLAN--------------ALRGRN---GQPS-T---SLSWSTRLRI------------AKGTARGLAYLHEC----S 528 (707)
Q Consensus 486 ~~gsL~~--------------~l~~~~---~~~~-~---~l~~~~~~~i------------~~~ia~~L~yLH~~----~ 528 (707)
+|..+.. .+|... ..+. . ...|.....- ...+...++++++. .
T Consensus 106 ~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~l~~~~~~l~~~~~~~~ 185 (322)
T 2ppq_A 106 EGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEIRPEIDYLAAHWPKDL 185 (322)
T ss_dssp CCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHHHHHHHHHHHHHHCCCSS
T ss_pred CCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhCcccC
Confidence 8754321 122111 0000 0 0124331110 11244556666542 2
Q ss_pred CCCceecCCCCCCeEEcCCCCeEEecccccc
Q 005226 529 PRKFVHGDIKPSNILLDNDFQPYISDFGLSR 559 (707)
Q Consensus 529 ~~~iiHrDlk~~NIll~~~~~~kl~DfGla~ 559 (707)
+..++|+|+.+.||+++++..+.|+||+.+.
T Consensus 186 ~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 186 PAGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp CEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred CcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 3579999999999999987666899999764
No 433
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=97.19 E-value=0.0014 Score=69.16 Aligned_cols=142 Identities=20% Similarity=0.191 Sum_probs=84.2
Q ss_pred eecccCeeEEEEEEeCC--------CceEEEEEcCCCchhhHHHHHHHHHHHHhcC-CCceeeeEEEEEcCCcceEEEEe
Q 005226 414 VLGKSGLGIVYKVVLGN--------GIPVAVRRLGEGGEQRHREFVTEVQAIAKVK-HPNIVKLRAYYWAPDEKLLISDF 484 (707)
Q Consensus 414 ~lG~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~lV~e~ 484 (707)
.+..|-...+|+....+ +..+++|+..... .....+.+|.++++.+. +.-..++++++.+ .+||||
T Consensus 57 ~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~-~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~e~ 131 (379)
T 3feg_A 57 PVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAIL-QGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLEQY 131 (379)
T ss_dssp EC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEEEC
T ss_pred EcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCcc-chHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEEEE
Confidence 46667778899988752 4678999864322 22356678999998883 3334566666543 299999
Q ss_pred ecCCChHH-----------------HHhCCCCCCCCCC--CHHHHHHHHHHHHH-------------------HHHHHh-
Q 005226 485 ISNGNLAN-----------------ALRGRNGQPSTSL--SWSTRLRIAKGTAR-------------------GLAYLH- 525 (707)
Q Consensus 485 ~~~gsL~~-----------------~l~~~~~~~~~~l--~~~~~~~i~~~ia~-------------------~L~yLH- 525 (707)
++|.+|.. -||.......... -|.+..++..++.. .+++|.
T Consensus 132 i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~ 211 (379)
T 3feg_A 132 IPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNLRK 211 (379)
T ss_dssp CSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHHHH
T ss_pred ecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHHHH
Confidence 98755431 1232221111122 24555555544322 233332
Q ss_pred ---h-cCCCCceecCCCCCCeEEcCC----CCeEEeccccccc
Q 005226 526 ---E-CSPRKFVHGDIKPSNILLDND----FQPYISDFGLSRL 560 (707)
Q Consensus 526 ---~-~~~~~iiHrDlk~~NIll~~~----~~~kl~DfGla~~ 560 (707)
. ..+..++|+|+.+.||+++.+ +.+.++||..+..
T Consensus 212 ~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 212 LLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp HHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred HHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 2 123569999999999999877 7899999998753
No 434
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.15 E-value=0.0015 Score=66.83 Aligned_cols=138 Identities=17% Similarity=0.186 Sum_probs=74.8
Q ss_pred eecccCeeEEEEEEeCCCceEEEEEcCCCchhhHHHHHHHHHHHHhcCCCce-eeeEEEEEcCCcceEEEEee-cCCChH
Q 005226 414 VLGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNI-VKLRAYYWAPDEKLLISDFI-SNGNLA 491 (707)
Q Consensus 414 ~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~ni-v~l~~~~~~~~~~~lV~e~~-~~gsL~ 491 (707)
.|+.|....+|+. ..+++|+........ ....+|+.+++.+....+ .+++++ ..+.-++|+||+ ++-++.
T Consensus 25 ~l~gG~tN~~~~~-----~~~vlR~~~~~~~~~-~~r~~E~~~l~~l~~~g~~P~~~~~--~~~~~~~v~e~i~~g~~l~ 96 (301)
T 3dxq_A 25 ERLGGLTNLVFRA-----GDLCLRIPGKGTEEY-INRANEAVAAREAAKAGVSPEVLHV--DPATGVMVTRYIAGAQTMS 96 (301)
T ss_dssp EEESCSSEEEEEE-----TTEEEEEECC----C-CCHHHHHHHHHHHHHTTSSCCEEEE--CTTTCCEEEECCTTCEECC
T ss_pred EcCCcccccccee-----eeEEEECCCCCccce-eCHHHHHHHHHHHHHcCCCCceEEE--ECCCCEEEEeecCCCccCC
Confidence 5788888999998 568888876532211 223568888877743233 455543 444568999999 554442
Q ss_pred H------------------HHhCCCCCCCCCCC-HHHHHHHHHH--------------HHHHH----HHHhh-cCCCCce
Q 005226 492 N------------------ALRGRNGQPSTSLS-WSTRLRIAKG--------------TARGL----AYLHE-CSPRKFV 533 (707)
Q Consensus 492 ~------------------~l~~~~~~~~~~l~-~~~~~~i~~~--------------ia~~L----~yLH~-~~~~~ii 533 (707)
. .+|..........+ +.....+... +...+ +.+.. ..+..++
T Consensus 97 ~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~l~ 176 (301)
T 3dxq_A 97 PEKFKTRPGSPARAGEAFRKLHGSGAVFPFRFELFAMIDDYLKVLSTKNVTLPAGYHDVVREAGGVRSALAAHPLPLAAC 176 (301)
T ss_dssp HHHHHHSTTHHHHHHHHHHHHHTSCCCCSSBCCHHHHHHHHHHHHC--CCCCCTTHHHHHHHHHHHHHHHHSSCCCCEEE
T ss_pred HhhHhhhHHHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCceee
Confidence 1 12222111011111 1111111110 11111 11111 1234689
Q ss_pred ecCCCCCCeEEcCCCCeEEeccccccc
Q 005226 534 HGDIKPSNILLDNDFQPYISDFGLSRL 560 (707)
Q Consensus 534 HrDlk~~NIll~~~~~~kl~DfGla~~ 560 (707)
|+|+.+.||+ ..++.+.++||..+..
T Consensus 177 HgDl~~~Nil-~~~~~~~lID~e~a~~ 202 (301)
T 3dxq_A 177 HCDPLCENFL-DTGERMWIVDWEYSGM 202 (301)
T ss_dssp CSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred ccCCCcCCEE-ECCCCEEEEecccccC
Confidence 9999999999 5667889999998753
No 435
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=97.10 E-value=0.0026 Score=65.89 Aligned_cols=142 Identities=14% Similarity=0.075 Sum_probs=73.5
Q ss_pred eecccCeeE-EEEEEeCCCceEEEEEcCCCchhhHHHHHHHHHHHHhcC-C-CceeeeEEEEEcCCcceEEEEeecCCCh
Q 005226 414 VLGKSGLGI-VYKVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVK-H-PNIVKLRAYYWAPDEKLLISDFISNGNL 490 (707)
Q Consensus 414 ~lG~G~~g~-Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H-~niv~l~~~~~~~~~~~lV~e~~~~gsL 490 (707)
.|+.|+... +|+....++..+++|....... ..+..|+.+++.+. + -.+.+++.+... .-++|||++.+..+
T Consensus 25 ~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~~---~~~~~e~~~l~~L~~~g~~vP~v~~~d~~--~g~ll~e~l~~~~l 99 (333)
T 3csv_A 25 PLAGDASSRRYQRLRSPTGAKAVLMDWSPEEG---GDTQPFVDLAQYLRNLDISAPEIYAEEHA--RGLLLIEDLGDALF 99 (333)
T ss_dssp C--------CCEEEECTTCCEEEEEECCTTTT---CCSHHHHHHHHHHHHTTCBCCCEEEEETT--TTEEEECCCCSCBH
T ss_pred ECCCCCCCceEEEEEcCCCCeEEEEECCCCCC---ccccHHHHHHHHHHhCCCCCCceeeecCC--CCEEEEeeCCCcch
Confidence 354554443 6677664466777776544321 23445777777663 2 234566665332 23789999977666
Q ss_pred HHHHhCC---------------------CCCCCCCCCHHHHH-------H-------------HHHHHHHHHHHHh---h
Q 005226 491 ANALRGR---------------------NGQPSTSLSWSTRL-------R-------------IAKGTARGLAYLH---E 526 (707)
Q Consensus 491 ~~~l~~~---------------------~~~~~~~l~~~~~~-------~-------------i~~~ia~~L~yLH---~ 526 (707)
.+++... .......++..... . ....+...++.+. .
T Consensus 100 ~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~~~ 179 (333)
T 3csv_A 100 TEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSAQL 179 (333)
T ss_dssp HHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHHHHC
T ss_pred HHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhcc
Confidence 5544321 10000112211100 0 0011122223331 1
Q ss_pred cCCCCceecCCCCCCeEEcCC----CCeEEeccccccc
Q 005226 527 CSPRKFVHGDIKPSNILLDND----FQPYISDFGLSRL 560 (707)
Q Consensus 527 ~~~~~iiHrDlk~~NIll~~~----~~~kl~DfGla~~ 560 (707)
..+..++|||+.+.||+++.+ ..+.|+||+.+..
T Consensus 180 ~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~ 217 (333)
T 3csv_A 180 EGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL 217 (333)
T ss_dssp CSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred cCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence 123689999999999999875 6799999998753
No 436
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.08 E-value=0.00043 Score=61.09 Aligned_cols=36 Identities=25% Similarity=0.504 Sum_probs=24.0
Q ss_pred hhhhhhcCCcccccCCCcccccCCCccEEeccCCCCC
Q 005226 167 LQRLILARNKFSGQIPAGIWPELENLVQLDLSDNDFK 203 (707)
Q Consensus 167 L~~L~l~~N~l~~~lp~~~~~~l~~L~~L~ls~N~l~ 203 (707)
|+.|+|++|+|+ .||.+.|..+++|+.|+|++|.+.
T Consensus 33 l~~L~Ls~N~l~-~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 33 TTELVLTGNNLT-ALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp CSEEECTTSCCS-SCCTTTGGGCTTCCEEECCSSCCB
T ss_pred CCEEECCCCcCC-ccChhhhhhccccCEEEecCCCee
Confidence 444455555554 677777777777778888777764
No 437
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.94 E-value=0.0012 Score=58.27 Aligned_cols=36 Identities=31% Similarity=0.459 Sum_probs=18.2
Q ss_pred CceEEecCccCCCCCCcccCCCCCccEEeccCCccc
Q 005226 119 LHSIFLYGNNLSGSLPPSVCNLPRLQNLDLSNNSFS 154 (707)
Q Consensus 119 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 154 (707)
|+.|+|++|+|+...+..|..+++|+.|+|++|.+.
T Consensus 33 l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 33 TTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp CSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred CCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 444455555554333344455555555555555543
No 438
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.90 E-value=0.0054 Score=65.98 Aligned_cols=71 Identities=13% Similarity=0.101 Sum_probs=48.0
Q ss_pred eecccCeeEEEEEEeCC--------CceEEEEEcCCCchhhHHHHHHHHHHHHhcCCCc-eeeeEEEEEcCCcceEEEEe
Q 005226 414 VLGKSGLGIVYKVVLGN--------GIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPN-IVKLRAYYWAPDEKLLISDF 484 (707)
Q Consensus 414 ~lG~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~n-iv~l~~~~~~~~~~~lV~e~ 484 (707)
.|+.|....+|++...+ +..+++|+...... ...+.+|..+++.+...+ ..++++.+.+ .+|+||
T Consensus 80 ~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~~--~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v~e~ 153 (429)
T 1nw1_A 80 RIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPET--ESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLEEY 153 (429)
T ss_dssp EECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCCC--HHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEECC
T ss_pred EeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCCc--HHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEEEEE
Confidence 57778889999998753 46788998744211 145567999998884333 3567765532 389999
Q ss_pred ecCCCh
Q 005226 485 ISNGNL 490 (707)
Q Consensus 485 ~~~gsL 490 (707)
+++-+|
T Consensus 154 l~G~~l 159 (429)
T 1nw1_A 154 IPSRPL 159 (429)
T ss_dssp CCEEEC
T ss_pred eCCccc
Confidence 986443
No 439
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.83 E-value=0.0048 Score=66.82 Aligned_cols=72 Identities=17% Similarity=0.154 Sum_probs=46.3
Q ss_pred eecccCeeEEEEEEeCC-CceEEEEEcCCCchhhHHHHHHHHHHHHhcCCCce-eeeEEEEEcCCcceEEEEeecCCCh
Q 005226 414 VLGKSGLGIVYKVVLGN-GIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNI-VKLRAYYWAPDEKLLISDFISNGNL 490 (707)
Q Consensus 414 ~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~ni-v~l~~~~~~~~~~~lV~e~~~~gsL 490 (707)
.|+.|-...+|+....+ +..+++|+........ -+-.+|..+++.+...++ .++++.+. + .+|+||+++-+|
T Consensus 115 ~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~-idR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~G~~l 188 (458)
T 2qg7_A 115 IINGGITNILIKVKDMSKQAKYLIRLYGPKTDEI-INREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMDGYAL 188 (458)
T ss_dssp EECC--CEEEEEEEETTTTEEEEEEEECC-CCSC-SCHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCCSEEC
T ss_pred EcCCCeEeEEEEEEECCCCceEEEEECCCChhhh-cCHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeCCccC
Confidence 57778889999999865 4778888875432111 112578999998854444 56777662 2 369999987544
No 440
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.80 E-value=6e-05 Score=71.27 Aligned_cols=112 Identities=17% Similarity=0.185 Sum_probs=50.8
Q ss_pred CCCCCCEEEcccC-CcCC----CCCccccCCCCCceEEecCccCCC----CCCcccCCCCCccEEeccCCccccc----C
Q 005226 91 SLIYLRRLNLHNN-NLFG----SLPDQLFNATSLHSIFLYGNNLSG----SLPPSVCNLPRLQNLDLSNNSFSGS----L 157 (707)
Q Consensus 91 ~l~~L~~L~L~~N-~l~~----~~p~~~~~l~~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~----~ 157 (707)
+-+.|++|+|++| +|.. .+-..+..-+.|+.|+|++|+|.. .+.+.+..-+.|+.|+|++|.|... +
T Consensus 39 ~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~al 118 (197)
T 1pgv_A 39 DDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARL 118 (197)
T ss_dssp TCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHH
T ss_pred cCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHH
Confidence 3445555555543 4431 122333444555555555555541 1122233334555555555555421 1
Q ss_pred CCCCcccchhhhhhhcCCcc---ccc----CCCcccccCCCccEEeccCCCCC
Q 005226 158 PDGLKNCKQLQRLILARNKF---SGQ----IPAGIWPELENLVQLDLSDNDFK 203 (707)
Q Consensus 158 p~~~~~l~~L~~L~l~~N~l---~~~----lp~~~~~~l~~L~~L~ls~N~l~ 203 (707)
-..+..-+.|+.|+|++|.. ... |- ..+..-++|+.|+++.|.+.
T Consensus 119 a~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia-~aL~~N~tL~~L~l~~~~~g 170 (197)
T 1pgv_A 119 LRSTLVTQSIVEFKADNQRQSVLGNQVEMDMM-MAIEENESLLRVGISFASME 170 (197)
T ss_dssp HHHTTTTCCCSEEECCCCSSCCCCHHHHHHHH-HHHHHCSSCCEEECCCCCHH
T ss_pred HHHHhhCCceeEEECCCCcCcCcCHHHHHHHH-HHHHhCCCcCeEeccCCCcc
Confidence 12233334455556654322 110 11 12234467888888877653
No 441
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.80 E-value=0.0031 Score=66.45 Aligned_cols=72 Identities=13% Similarity=0.131 Sum_probs=43.7
Q ss_pred eecccCeeEEEEEEeCCC---------ceEEEEEcCCCchhhHHHHHHHHHHHHhcCCCc-eeeeEEEEEcCCcceEEEE
Q 005226 414 VLGKSGLGIVYKVVLGNG---------IPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPN-IVKLRAYYWAPDEKLLISD 483 (707)
Q Consensus 414 ~lG~G~~g~Vy~~~~~~~---------~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~n-iv~l~~~~~~~~~~~lV~e 483 (707)
.++.|....+|+....++ ..+++|+....... ......|.++++.+...+ +.++++.. .-++|||
T Consensus 40 ~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~-~~~~~~E~~~l~~L~~~g~~P~~~~~~----~~~~v~e 114 (369)
T 3c5i_A 40 QILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDE-LYNTISEFEVYKTMSKYKIAPQLLNTF----NGGRIEE 114 (369)
T ss_dssp EC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGG-TSCHHHHHHHHHHHHHTTSSCCEEEEE----TTEEEEE
T ss_pred EeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccc-eecHHHHHHHHHHHHhcCCCCceEEec----CCcEEEE
Confidence 467777789999987542 67888887553221 122357888888884333 44666543 2478999
Q ss_pred eecCCCh
Q 005226 484 FISNGNL 490 (707)
Q Consensus 484 ~~~~gsL 490 (707)
|++|.++
T Consensus 115 ~i~G~~l 121 (369)
T 3c5i_A 115 WLYGDPL 121 (369)
T ss_dssp CCCSEEC
T ss_pred EecCCcC
Confidence 9987543
No 442
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.78 E-value=0.00014 Score=68.75 Aligned_cols=65 Identities=22% Similarity=0.295 Sum_probs=32.3
Q ss_pred cCCCCCceEEecCc-cCCC----CCCcccCCCCCccEEeccCCcccccCCC----CCcccchhhhhhhcCCccc
Q 005226 114 FNATSLHSIFLYGN-NLSG----SLPPSVCNLPRLQNLDLSNNSFSGSLPD----GLKNCKQLQRLILARNKFS 178 (707)
Q Consensus 114 ~~l~~L~~L~L~~N-~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~~p~----~~~~l~~L~~L~l~~N~l~ 178 (707)
.+-+.|+.|+|++| +|.. .+-+.+..-+.|+.|+|++|+|...--. .+..-+.|+.|+|++|+|.
T Consensus 38 ~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig 111 (197)
T 1pgv_A 38 EDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLT 111 (197)
T ss_dssp TTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCC
T ss_pred hcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCC
Confidence 33455666666654 5541 1223344445566666666666522111 2223345666666666665
No 443
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=96.37 E-value=0.0053 Score=63.81 Aligned_cols=31 Identities=32% Similarity=0.498 Sum_probs=27.8
Q ss_pred CCceecCCCCCCeEEcCCCCeEEeccccccc
Q 005226 530 RKFVHGDIKPSNILLDNDFQPYISDFGLSRL 560 (707)
Q Consensus 530 ~~iiHrDlk~~NIll~~~~~~kl~DfGla~~ 560 (707)
..++|+|+.+.||+++.++.+.|+||+.+..
T Consensus 206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~ 236 (339)
T 3i1a_A 206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPML 236 (339)
T ss_dssp CEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred ceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence 5799999999999999888899999987754
No 444
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=96.32 E-value=0.022 Score=54.07 Aligned_cols=104 Identities=14% Similarity=0.036 Sum_probs=68.8
Q ss_pred CChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEecccccccccccCCC
Q 005226 488 GNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRLINITGNN 567 (707)
Q Consensus 488 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~~~~~~~~ 567 (707)
-+|.++|...+ .++++++++.++.|.+.+|.-+-.. +.-..+=+.|..|++..+|.|...+ +.+.
T Consensus 33 vSL~eIL~~~~----~PlsEEqaWALc~Qc~~~L~~~~~~--~~~~~~i~~~~~i~l~~dG~V~f~~-~~s~-------- 97 (229)
T 2yle_A 33 LSLEEILRLYN----QPINEEQAWAVCYQCCGSLRAAARR--RQPRHRVRSAAQIRVWRDGAVTLAP-AADD-------- 97 (229)
T ss_dssp EEHHHHHHHHT----SCCCHHHHHHHHHHHHHHHHHHHHT--TCCCCCCCSGGGEEEETTSCEEECC-C-----------
T ss_pred ccHHHHHHHcC----CCcCHHHHHHHHHHHHHHHHhhhhc--ccCCceecCCcceEEecCCceeccc-cccc--------
Confidence 48999998764 4799999999999999998776210 1111233456889999999988764 2111
Q ss_pred CCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHHHHhCCCCC
Q 005226 568 PSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLELLTGKSPE 628 (707)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~elltg~~P~ 628 (707)
.....+.|||... ...+.+.=|||+|+++|..+--..|-
T Consensus 98 --------------------~~~~~~~~pe~~~--~~~te~~~IysLG~tLY~ALDygL~e 136 (229)
T 2yle_A 98 --------------------AGEPPPVAGKLGY--SQCMETEVIESLGIIIYKALDYGLKE 136 (229)
T ss_dssp -----------------------------CCSS--SSSCHHHHHHHHHHHHHHHHTTTCCT
T ss_pred --------------------ccccCCCChhhcc--ccchHHHHHHHHHHHHHHHhhcCCCc
Confidence 0022466888753 45578999999999999999866553
No 445
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=96.30 E-value=0.011 Score=62.69 Aligned_cols=142 Identities=21% Similarity=0.212 Sum_probs=82.8
Q ss_pred eecccCeeEEEEEEeCC--------CceEEEEEcCCCchh------------h------HHHHHHHHHHHHhc-CCCcee
Q 005226 414 VLGKSGLGIVYKVVLGN--------GIPVAVRRLGEGGEQ------------R------HREFVTEVQAIAKV-KHPNIV 466 (707)
Q Consensus 414 ~lG~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~------------~------~~~~~~E~~~l~~l-~H~niv 466 (707)
.|..|-...+|+...++ ...|.+++....... . .+....|..+++.+ .+.-..
T Consensus 59 ~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~P 138 (401)
T 3f2s_A 59 VIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLGP 138 (401)
T ss_dssp EEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSSC
T ss_pred EcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCCC
Confidence 45557778899988754 356888876443211 0 11233588888888 444456
Q ss_pred eeEEEEEcCCcceEEEEeecCCChHH-----------------HHhCCCCCCCCCCC--HHHHHHHHHHHH---------
Q 005226 467 KLRAYYWAPDEKLLISDFISNGNLAN-----------------ALRGRNGQPSTSLS--WSTRLRIAKGTA--------- 518 (707)
Q Consensus 467 ~l~~~~~~~~~~~lV~e~~~~gsL~~-----------------~l~~~~~~~~~~l~--~~~~~~i~~~ia--------- 518 (707)
++++++.. .+|+||+++-+|.. -+|........... |....++..++.
T Consensus 139 kl~~~~~~----G~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~~ 214 (401)
T 3f2s_A 139 KLYGIFPQ----GRLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEESR 214 (401)
T ss_dssp CEEEEETT----EEEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSHHH
T ss_pred eEEEEeCC----CeEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcchhh
Confidence 67776532 29999998644421 12322111112233 334444443321
Q ss_pred -------------HHH----HHHhh-cCCCCceecCCCCCCeEEcCC------CCeEEecccccc
Q 005226 519 -------------RGL----AYLHE-CSPRKFVHGDIKPSNILLDND------FQPYISDFGLSR 559 (707)
Q Consensus 519 -------------~~L----~yLH~-~~~~~iiHrDlk~~NIll~~~------~~~kl~DfGla~ 559 (707)
.-+ ++|.. ..+..++|+|+.+.||+++.+ +.+.++||..|.
T Consensus 215 ~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~ 279 (401)
T 3f2s_A 215 IKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCE
T ss_pred hhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCC
Confidence 112 22322 123568999999999999887 789999999875
No 446
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=95.63 E-value=0.019 Score=61.25 Aligned_cols=141 Identities=15% Similarity=0.143 Sum_probs=83.9
Q ss_pred eecccCeeEEEEEEeCC--------CceEEEEEcCCCchhhHHHHHHHHHHHHhcC-CCceeeeEEEEEcCCcceEEEEe
Q 005226 414 VLGKSGLGIVYKVVLGN--------GIPVAVRRLGEGGEQRHREFVTEVQAIAKVK-HPNIVKLRAYYWAPDEKLLISDF 484 (707)
Q Consensus 414 ~lG~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~lV~e~ 484 (707)
.+..|-...+|+....+ +..+++|+........ -+-.+|.++++.+. +.-..++++.+ .-++|+||
T Consensus 77 ~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~~~-idR~~E~~~l~~L~~~gi~P~l~~~~----~~~~I~ef 151 (424)
T 3mes_A 77 QIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGKF-YDSKVELDVFRYLSNINIAPNIIADF----PEGRIEEF 151 (424)
T ss_dssp EECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-CC-CCHHHHHHHHHHHHHTTSSCCEEEEE----TTEEEEEC
T ss_pred EcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcchh-cCHHHHHHHHHHHHhcCCCCCEEEEc----CCCEEEEE
Confidence 46667778999998753 5778888865432211 22357888888884 33344566533 23799999
Q ss_pred ecCCChHH-----------------HHhCCCC----C----CCCCCCHHHHHHHHHHH-------------------HHH
Q 005226 485 ISNGNLAN-----------------ALRGRNG----Q----PSTSLSWSTRLRIAKGT-------------------ARG 520 (707)
Q Consensus 485 ~~~gsL~~-----------------~l~~~~~----~----~~~~l~~~~~~~i~~~i-------------------a~~ 520 (707)
++|.+|.. .||.... - ...+.-|.++.++..++ ...
T Consensus 152 I~G~~l~~~~l~~~~~~~~ia~~La~LH~~~~~~~~L~~~~~~~p~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~e 231 (424)
T 3mes_A 152 IDGEPLTTKQLQLTHICVEVAKNMGSLHIINSKRADFPSRFDKEPILFKRIYLWREEAKIQVSKNNFQIDKELYSKILEE 231 (424)
T ss_dssp CCSEECCTGGGGSHHHHHHHHHHHHHHHTHHHHCTTSCTTSCCSCCHHHHHHHHHHHHHHHHHTCC--CCHHHHHHHHHH
T ss_pred eCCccCChhhcCCHHHHHHHHHHHHHHhcCchhhccCccccCCCCcHHHHHHHHHHHHHHhhcccchhhccccHHHHHHH
Confidence 99865421 1111100 0 11122355544444332 222
Q ss_pred HHHHhh---------------------cCCCCceecCCCCCCeEEcCCCCeEEeccccccc
Q 005226 521 LAYLHE---------------------CSPRKFVHGDIKPSNILLDNDFQPYISDFGLSRL 560 (707)
Q Consensus 521 L~yLH~---------------------~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~~ 560 (707)
+++|.+ ..+..++|+|+.+.||+ +.++.+.++||..|..
T Consensus 232 ~~~L~~~l~~~~~~~~~r~~~~~~~~~~~~~~~~H~D~~~~N~l-~~~~~~~~IDwe~a~~ 291 (424)
T 3mes_A 232 IDQLEELIMGGEKFSMERALELKLYSPAFSLVFAHNDLQENNLL-QTQNNIRMIDYEYSAI 291 (424)
T ss_dssp HHHHHHHHHTSSCCCHHHHHHHHTTCGGGCEEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred HHHHHHHHhhhcccccccccccccccCCCCceEECCCCCcccee-cCCCcEEEEecccCCc
Confidence 333321 11246899999999999 7888999999998864
No 447
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=90.50 E-value=0.75 Score=48.55 Aligned_cols=30 Identities=33% Similarity=0.497 Sum_probs=25.1
Q ss_pred CceecCCCCCCeEE------cCCCCeEEeccccccc
Q 005226 531 KFVHGDIKPSNILL------DNDFQPYISDFGLSRL 560 (707)
Q Consensus 531 ~iiHrDlk~~NIll------~~~~~~kl~DfGla~~ 560 (707)
.++|+|+.+.||++ +++..++++||.+|..
T Consensus 245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eeEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 36799999999999 4567799999998854
No 448
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=82.87 E-value=2.7 Score=39.87 Aligned_cols=83 Identities=18% Similarity=0.197 Sum_probs=61.7
Q ss_pred CCCceeeeEEEEEcCCcceEEEEeecCCChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHH-HHhhcCCCCceecCCCC
Q 005226 461 KHPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLA-YLHECSPRKFVHGDIKP 539 (707)
Q Consensus 461 ~H~niv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~-yLH~~~~~~iiHrDlk~ 539 (707)
.||++ -..+-.+++...+.|+.-+++.=...++ .++...+++++..|+...+ +++. -+|--|.|
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i~--------~~~~~eKlrll~nl~~L~~~~~~~-----r~tf~l~P 112 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAIR--------KTTLLSRIRAAIHLVSKVKHHSAR-----RLIFIVCP 112 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHHH--------TSCHHHHHHHHHHHHHHHSSCCSS-----SEECCCCG
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHHH--------hcCHHHHHHHHHHHHHHHHHhhhC-----ceeEEEeC
Confidence 67888 3344466667667677654544444554 3788899999999888777 5654 47888999
Q ss_pred CCeEEcCCCCeEEeccccc
Q 005226 540 SNILLDNDFQPYISDFGLS 558 (707)
Q Consensus 540 ~NIll~~~~~~kl~DfGla 558 (707)
+|+++|.++.+++.-.|+-
T Consensus 113 ~NL~f~~~~~p~i~hRGi~ 131 (219)
T 4ano_A 113 ENLMFNRALEPFFLHVGVK 131 (219)
T ss_dssp GGEEECTTCCEEESCCEET
T ss_pred ceEEEeCCCcEEEEEcCCc
Confidence 9999999999999988863
No 449
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=80.33 E-value=2 Score=40.61 Aligned_cols=116 Identities=12% Similarity=0.083 Sum_probs=79.0
Q ss_pred CCCceeeeEEEEEcCCcceEEEEeecCCChHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCC
Q 005226 461 KHPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPS 540 (707)
Q Consensus 461 ~H~niv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~ 540 (707)
.||+.+.. .+-.+++...+.|+.-+.+-=...++ .++...+++++..|+...++++. -+|--|.|+
T Consensus 43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~ik--------~~~~~eKlr~l~ni~~l~~~~~~-----r~tf~L~P~ 108 (215)
T 4ann_A 43 HSPYFIDA-ELTELRDSFQIHYDINDNHTPFDNIK--------SFTKNEKLRYLLNIKNLEEVNRT-----RYTFVLAPD 108 (215)
T ss_dssp CCTTBCCE-EEEECSSEEEEEECCCTTSEEGGGGG--------GSCHHHHHHHHHHGGGGGGGGGS-----SEECCCSGG
T ss_pred cCCcccce-EEEEcccEEEEEEEcCcccCCHHHHH--------hcCHHHHHHHHHHHHHHHHHhcC-----ceEEEEecc
Confidence 68888876 45555665555555443222222233 37889999999999998876664 378899999
Q ss_pred CeEEcCCCCeEEecccccccccccCCCCCCCCCCcCCCCCCCCccccccCccccCCCCCCCCCCCCchhhHHHHHHHHHH
Q 005226 541 NILLDNDFQPYISDFGLSRLINITGNNPSSSGGFMGGALPYMKPVQTEKTNNYRAPEARVPGNRPMQKWDVYSFGVVLLE 620 (707)
Q Consensus 541 NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DV~S~Gv~l~e 620 (707)
|+++|.++.+++.-.|+-..+ +|. ..++..=.-.+=+++..
T Consensus 109 NL~f~~~~~p~i~~RGik~~l---------------------------------~P~------~~~ee~fL~qyKAliia 149 (215)
T 4ann_A 109 ELFFTRDGLPIAKTRGLQNVV---------------------------------DPL------PVSEAEFLTRYKALVIC 149 (215)
T ss_dssp GEEECTTSCEEESCCEETTTB---------------------------------SCC------CCCHHHHHHHHHHHHHH
T ss_pred eEEEcCCCCEEEEEccCccCC---------------------------------CCC------CCCHHHHHHHHHHHHHH
Confidence 999999999999988863221 122 11233335567788888
Q ss_pred HHhCCCCCC
Q 005226 621 LLTGKSPEL 629 (707)
Q Consensus 621 lltg~~P~~ 629 (707)
+++++..|.
T Consensus 150 ll~~K~~Fe 158 (215)
T 4ann_A 150 AFNEKQSFD 158 (215)
T ss_dssp HHCTTCCHH
T ss_pred HHcCCCCHH
Confidence 999988874
No 450
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=79.93 E-value=0.052 Score=35.75 Aligned_cols=29 Identities=24% Similarity=0.288 Sum_probs=17.9
Q ss_pred CCCCCCceEeeeecchhHHHHHHhheeeE
Q 005226 307 KGLGPGLIVLISAADAAAVAVIGLVIVYV 335 (707)
Q Consensus 307 ~~~~~~~i~~i~~~~~~~~~~~~~~~~~~ 335 (707)
++++.+.|..++++.++++++++.+++++
T Consensus 6 ~~ls~GaIAGiVvG~v~gv~li~~l~~~~ 34 (38)
T 2k1k_A 6 RGLTGGEIVAVIFGLLLGAALLLGILVFR 34 (38)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCceeeeehHHHHHHHHHHHHHHHH
Confidence 34566778777777776666555544443
No 451
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=79.31 E-value=0.24 Score=53.45 Aligned_cols=55 Identities=16% Similarity=0.219 Sum_probs=15.2
Q ss_pred eeEEEEEEeCC-CceEEE------EEcCCCc--hhhHHHHHHHHHHHHhcCCCceeeeEEEEEc
Q 005226 420 LGIVYKVVLGN-GIPVAV------RRLGEGG--EQRHREFVTEVQAIAKVKHPNIVKLRAYYWA 474 (707)
Q Consensus 420 ~g~Vy~~~~~~-~~~vav------K~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~ 474 (707)
||.||+|.+.. ..+||| |..+... ......|.+|..+++.++|||+++.+++...
T Consensus 152 fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~~ 215 (463)
T 3cxl_A 152 YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKVH 215 (463)
T ss_dssp BCCC---------CCBGGGC-----------------------------------CBCCCEEEE
T ss_pred chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEEe
Confidence 99999999854 468888 7665432 2233578899999999999999999888754
No 452
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=67.30 E-value=0.26 Score=33.50 Aligned_cols=8 Identities=0% Similarity=0.434 Sum_probs=3.4
Q ss_pred eEEEEeec
Q 005226 334 YVYWKKKD 341 (707)
Q Consensus 334 ~~~~~r~~ 341 (707)
++++|||+
T Consensus 32 ~~~~RRr~ 39 (44)
T 2ks1_B 32 GLFMRRRH 39 (44)
T ss_dssp HHHHHTTT
T ss_pred HHHhhhhH
Confidence 34444443
No 453
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=62.16 E-value=0.27 Score=33.38 Aligned_cols=8 Identities=38% Similarity=0.646 Sum_probs=3.2
Q ss_pred eEEEEeec
Q 005226 334 YVYWKKKD 341 (707)
Q Consensus 334 ~~~~~r~~ 341 (707)
++++|||+
T Consensus 31 ~~~~RRRr 38 (44)
T 2l2t_A 31 AVYVRRKS 38 (44)
T ss_dssp HHHHHTTC
T ss_pred HHHhhhhh
Confidence 34444433
No 454
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=57.54 E-value=55 Score=35.99 Aligned_cols=46 Identities=26% Similarity=0.280 Sum_probs=35.6
Q ss_pred CHHHHHHHHHHHH--HHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEeccccc
Q 005226 506 SWSTRLRIAKGTA--RGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLS 558 (707)
Q Consensus 506 ~~~~~~~i~~~ia--~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla 558 (707)
.|..+..++..+| ..+.|+=. | +|=.++|||+|.+|++-=+|||..
T Consensus 453 ~~~a~~nF~~S~A~ySvv~YILG-----i--gDRH~~NILld~tG~v~HIDFG~~ 500 (614)
T 3ls8_A 453 SAEVMDTYVKSCAGYCVITYILG-----V--GDRHLDNLLLTKTGKLFHIDFGYI 500 (614)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHT-----C--CCCCTTSEEECTTSCEEECCCSSC
T ss_pred cHHHHHHHHHHHHHHhHhheeee-----c--cCCCCcceeEcCCCCEeeeehHHh
Confidence 4666777777655 45667643 3 688899999999999999999986
No 455
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=48.02 E-value=44 Score=27.02 Aligned_cols=49 Identities=20% Similarity=0.247 Sum_probs=31.9
Q ss_pred CCCccccCCCCcCCCCCCCEEEcccCCcCCCCCccccCCCCCceEEecCc
Q 005226 78 GKNVRGYIPSELGSLIYLRRLNLHNNNLFGSLPDQLFNATSLHSIFLYGN 127 (707)
Q Consensus 78 ~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 127 (707)
+..++.+-...|.++++|+.+.|-.+ ++.+-...|.++.+|+.+.|...
T Consensus 5 g~~vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~~ 53 (100)
T 2lz0_A 5 GEPVVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTGE 53 (100)
T ss_dssp CCCCCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECCS
T ss_pred CCccCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcCC
Confidence 34455555677777777777777654 44455566777777777777554
No 456
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=36.83 E-value=47 Score=26.85 Aligned_cols=47 Identities=15% Similarity=0.106 Sum_probs=29.7
Q ss_pred CcCCCCCccccCCCCCceEEecCccCCCCCCcccCCCCCccEEeccCC
Q 005226 104 NLFGSLPDQLFNATSLHSIFLYGNNLSGSLPPSVCNLPRLQNLDLSNN 151 (707)
Q Consensus 104 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 151 (707)
.++.+-...|.++++|+.+.|-.+ ++.+-..+|.++.+|+.+.+...
T Consensus 7 ~vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~~ 53 (100)
T 2lz0_A 7 PVVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTGE 53 (100)
T ss_dssp CCCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECCS
T ss_pred ccCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcCC
Confidence 445455566777777777777655 33355566777777777776543
No 457
>2x6h_A GH13170P, VPS34, phosphotidylinositol 3 kinase 59F; transferase; 2.90A {Drosophila melanogaster} PDB: 2x6f_A 2x6i_A* 2x6j_A* 2x6k_A*
Probab=35.13 E-value=2.1e+02 Score=31.92 Aligned_cols=45 Identities=27% Similarity=0.296 Sum_probs=33.4
Q ss_pred HHHHHHHHHHH--HHHHHHhhcCCCCceecCCCCCCeEEcCCCCeEEecccccc
Q 005226 508 STRLRIAKGTA--RGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLSR 559 (707)
Q Consensus 508 ~~~~~i~~~ia--~~L~yLH~~~~~~iiHrDlk~~NIll~~~~~~kl~DfGla~ 559 (707)
..+..++..+| ..+.|+=. | +|=.++|||++.+|++-=+|||..-
T Consensus 529 ~ar~nF~~SlA~~Svv~YILG-----l--GDRH~~NILid~tG~v~HIDFG~~f 575 (696)
T 2x6h_A 529 EVMDTYIKSCAGYCVITYLLG-----V--GDRHLDNLLLTTNGKLFHIDFGYIL 575 (696)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT-----C--CCCCTTTEEECTTSCEEECCCCSCT
T ss_pred HHHHHHHHHHHHHHHHHHHcc-----C--CCCCCcceEEeCCCCEEEEeehhhh
Confidence 45556666554 34556543 3 7889999999999999999999863
No 458
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=21.07 E-value=1.9e+02 Score=29.14 Aligned_cols=131 Identities=12% Similarity=0.073 Sum_probs=65.4
Q ss_pred ccCeeEEEEEEeCCCceEEEEEcCCCchhhHHHHHHHHHHHHhcCCCceeeeEEEE-----------------------E
Q 005226 417 KSGLGIVYKVVLGNGIPVAVRRLGEGGEQRHREFVTEVQAIAKVKHPNIVKLRAYY-----------------------W 473 (707)
Q Consensus 417 ~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~-----------------------~ 473 (707)
.|. +-||.+.. ++..|+||... . -..+-|-.++...-.+.-|+.--+. +. .
T Consensus 79 ~Gs-tgvff~~t-d~~~~VVK~s~--~-l~~E~l~s~LA~~LGlpiP~~Riv~-~~~~E~~e~~~~L~~~~~~~~~l~~l 152 (342)
T 1cja_A 79 KGT-EGLFFVET-ESGVFIVKRST--N-IESETFCSLLCMRLGLHAPKVRVVS-SNSEEGTNMLECLAAIDKSFRVITTL 152 (342)
T ss_dssp STT-SCEEEEEE-SSCEEEEECCT--T-HHHHHHHHHHHHHHTCCCCCEEEEE-SSSHHHHHHHHHHHHHCSSSCHHHHH
T ss_pred CCC-CCeEEEEe-CCCEEEEeCcH--H-HHHHHHHHHHHHHhCCCCCCeeEEe-eCcHHHHHHHHHHHHhhhhhHHHHHh
Confidence 344 44555554 57788899542 1 1223444444444445555522111 11 0
Q ss_pred cCCcceEEEEeecCCChHHHHhCCCCCCCCCCCHHHHHHHHHHH--HHHHHHHhh-cCCCCcee-cCCCCCCeEEcCCCC
Q 005226 474 APDEKLLISDFISNGNLANALRGRNGQPSTSLSWSTRLRIAKGT--ARGLAYLHE-CSPRKFVH-GDIKPSNILLDNDFQ 549 (707)
Q Consensus 474 ~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i--a~~L~yLH~-~~~~~iiH-rDlk~~NIll~~~~~ 549 (707)
.....+++|||.+|..|.+.=+... ...+.. +.+.++ .-+++++.. ....+.+. .--.++|||++++..
T Consensus 153 ~~~~~~l~meyv~G~~L~e~~~~~~---~~~f~~----~~~k~LG~Ii~FDi~InN~DR~Pl~W~n~GN~~NIL~~~~n~ 225 (342)
T 1cja_A 153 ANQANILLMELVRGITLNKLTTTSA---PEVLTK----STMQQLGSLMALDVIVNNSDRLPIAWTNEGNLDNIMLSERGA 225 (342)
T ss_dssp TTCSEEEEEECCCEEESTTCCSSSH---HHHSCH----HHHHHHHHHHHHHHHHTCCSSSCSSSCSCCCGGGEEEESBTT
T ss_pred hcccceehhhhcCCCccccchhhhh---hhhcCH----HHHHhhchhheehhhhcCCccCcccccCCCChhheEEeCCCC
Confidence 0123459999998766544322100 001222 223333 234455544 33223332 235788999987654
Q ss_pred -eEEeccccccc
Q 005226 550 -PYISDFGLSRL 560 (707)
Q Consensus 550 -~kl~DfGla~~ 560 (707)
+.++|-+.+..
T Consensus 226 ~~~~IDhn~af~ 237 (342)
T 1cja_A 226 TVVPIDSKIIPL 237 (342)
T ss_dssp CEEECSCCCCCC
T ss_pred eEEEEcCCcccc
Confidence 88899888753
Done!