Query 005227
Match_columns 707
No_of_seqs 717 out of 6020
Neff 8.8
Searched_HMMs 46136
Date Thu Mar 28 20:07:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005227.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/005227hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00113 leucine-rich repeat r 100.0 1.1E-54 2.4E-59 527.6 44.1 513 1-654 427-956 (968)
2 KOG1187 Serine/threonine prote 100.0 3.6E-52 7.8E-57 442.5 28.9 285 361-651 61-354 (361)
3 KOG0192 Tyrosine kinase specif 100.0 2.5E-47 5.3E-52 402.4 25.0 260 378-655 44-309 (362)
4 KOG0615 Serine/threonine prote 100.0 6.9E-49 1.5E-53 395.9 12.5 260 373-691 170-444 (475)
5 KOG0581 Mitogen-activated prot 100.0 9.2E-48 2E-52 385.9 19.2 194 379-586 83-280 (364)
6 KOG0197 Tyrosine kinases [Sign 100.0 6.4E-48 1.4E-52 404.7 17.0 263 369-651 200-463 (468)
7 KOG0659 Cdk activating kinase 100.0 4.2E-48 9.2E-53 369.6 13.5 277 375-692 2-289 (318)
8 KOG0575 Polo-like serine/threo 100.0 3E-47 6.5E-52 403.1 20.5 256 375-692 18-278 (592)
9 KOG0661 MAPK related serine/th 100.0 1.1E-47 2.4E-52 393.6 11.5 287 374-693 9-300 (538)
10 KOG0595 Serine/threonine-prote 100.0 2.9E-46 6.3E-51 377.8 21.2 268 374-682 9-285 (429)
11 KOG0598 Ribosomal protein S6 k 100.0 6.3E-47 1.4E-51 379.8 15.7 272 373-706 23-303 (357)
12 KOG0600 Cdc2-related protein k 100.0 7.9E-47 1.7E-51 390.0 15.1 287 374-692 116-408 (560)
13 KOG0593 Predicted protein kina 100.0 2.4E-47 5.2E-52 370.1 7.9 282 375-691 2-291 (396)
14 KOG1026 Nerve growth factor re 100.0 1.5E-45 3.3E-50 404.6 18.9 264 373-654 484-767 (774)
15 KOG0663 Protein kinase PITSLRE 100.0 2.4E-45 5.1E-50 360.8 16.1 286 375-692 76-369 (419)
16 KOG0591 NIMA (never in mitosis 100.0 3.5E-46 7.6E-51 358.5 9.3 257 375-648 19-284 (375)
17 KOG0616 cAMP-dependent protein 100.0 6.8E-45 1.5E-49 352.6 17.8 266 375-705 44-318 (355)
18 KOG0660 Mitogen-activated prot 100.0 2.7E-45 5.9E-50 366.5 14.9 289 373-692 20-318 (359)
19 KOG0592 3-phosphoinositide-dep 100.0 1.3E-44 2.8E-49 376.6 17.9 265 374-693 72-347 (604)
20 KOG0582 Ste20-like serine/thre 100.0 4.6E-44 1E-48 364.3 17.6 275 373-693 24-302 (516)
21 KOG0605 NDR and related serine 100.0 9.5E-44 2.1E-48 370.6 19.3 281 372-706 138-465 (550)
22 KOG0196 Tyrosine kinase, EPH ( 100.0 1.8E-44 4E-49 387.6 11.8 271 364-652 609-894 (996)
23 KOG0578 p21-activated serine/t 100.0 4.1E-44 8.9E-49 376.3 13.6 258 375-692 273-531 (550)
24 KOG0667 Dual-specificity tyros 100.0 6.1E-44 1.3E-48 382.4 13.8 291 376-692 187-510 (586)
25 KOG0597 Serine-threonine prote 100.0 8.7E-44 1.9E-48 369.9 13.0 256 375-693 2-260 (808)
26 KOG0583 Serine/threonine prote 100.0 2E-42 4.3E-47 368.7 21.3 255 372-689 14-280 (370)
27 KOG0594 Protein kinase PCTAIRE 100.0 1.6E-42 3.4E-47 348.4 18.5 294 374-698 10-316 (323)
28 KOG0658 Glycogen synthase kina 100.0 1.8E-43 3.8E-48 354.2 10.9 276 376-690 25-312 (364)
29 cd07871 STKc_PCTAIRE3 Catalyti 100.0 4E-42 8.6E-47 359.6 19.8 281 375-687 5-288 (288)
30 KOG0193 Serine/threonine prote 100.0 2.2E-42 4.7E-47 364.0 17.7 269 365-655 382-659 (678)
31 cd05631 STKc_GRK4 Catalytic do 100.0 4.4E-42 9.5E-47 358.8 19.9 200 376-586 1-204 (285)
32 PHA03212 serine/threonine kina 100.0 1E-41 2.2E-46 370.9 22.4 282 374-690 91-382 (391)
33 KOG0198 MEKK and related serin 100.0 4.8E-42 1E-46 351.3 16.8 203 375-585 17-224 (313)
34 KOG0588 Serine/threonine prote 100.0 2.6E-42 5.5E-47 366.3 14.7 257 376-695 13-274 (786)
35 KOG0694 Serine/threonine prote 100.0 5.7E-42 1.2E-46 366.8 16.3 205 371-588 364-573 (694)
36 KOG1095 Protein tyrosine kinas 100.0 1.4E-41 3E-46 386.5 19.5 262 374-653 691-965 (1025)
37 cd07869 STKc_PFTAIRE1 Catalyti 100.0 3.4E-41 7.4E-46 355.3 21.1 286 374-690 4-294 (303)
38 cd05102 PTKc_VEGFR3 Catalytic 100.0 5.4E-41 1.2E-45 359.4 22.9 263 372-651 4-336 (338)
39 cd07862 STKc_CDK6 Catalytic do 100.0 3.7E-41 8.1E-46 352.5 21.0 278 375-687 1-290 (290)
40 KOG0033 Ca2+/calmodulin-depend 100.0 2.2E-43 4.7E-48 332.7 3.6 259 373-690 9-273 (355)
41 cd07848 STKc_CDKL5 Catalytic d 100.0 3.8E-41 8.2E-46 351.9 20.3 284 375-687 1-287 (287)
42 cd05612 STKc_PRKX_like Catalyt 100.0 1.7E-41 3.7E-46 355.4 17.7 253 375-692 1-262 (291)
43 PTZ00263 protein kinase A cata 100.0 1.7E-41 3.8E-46 361.6 18.0 197 375-586 18-218 (329)
44 KOG0610 Putative serine/threon 100.0 2.7E-41 5.9E-46 341.6 17.9 280 374-706 76-412 (459)
45 cd05571 STKc_PKB Catalytic dom 100.0 3.2E-41 6.9E-46 358.7 18.4 194 381-586 1-198 (323)
46 PTZ00426 cAMP-dependent protei 100.0 5.3E-41 1.1E-45 359.0 19.8 199 374-587 29-232 (340)
47 cd06649 PKc_MEK2 Catalytic dom 100.0 7.8E-41 1.7E-45 357.0 20.8 299 374-693 4-310 (331)
48 cd06650 PKc_MEK1 Catalytic dom 100.0 6.7E-41 1.4E-45 357.7 20.2 297 373-693 3-308 (333)
49 KOG0585 Ca2+/calmodulin-depend 100.0 3.6E-41 7.9E-46 345.1 17.2 265 372-692 94-380 (576)
50 KOG1094 Discoidin domain recep 100.0 1.1E-40 2.5E-45 347.8 20.2 261 374-649 537-804 (807)
51 KOG4721 Serine/threonine prote 100.0 1.8E-41 3.9E-46 352.2 12.8 243 376-649 125-368 (904)
52 PTZ00284 protein kinase; Provi 100.0 1.7E-40 3.7E-45 370.7 20.8 296 368-693 122-447 (467)
53 cd07853 STKc_NLK Catalytic dom 100.0 2.4E-40 5.2E-45 359.1 21.2 285 376-690 1-294 (372)
54 cd05585 STKc_YPK1_like Catalyt 100.0 1.9E-40 4.1E-45 351.1 19.4 192 383-586 1-196 (312)
55 KOG0194 Protein tyrosine kinas 100.0 1.3E-40 2.8E-45 355.5 17.6 267 368-655 150-426 (474)
56 KOG0580 Serine/threonine prote 100.0 1.6E-41 3.4E-46 320.2 9.3 254 374-689 21-278 (281)
57 cd07859 STKc_TDY_MAPK_plant Ca 100.0 4.2E-40 9.1E-45 352.4 21.5 284 376-693 1-299 (338)
58 KOG0599 Phosphorylase kinase g 100.0 1.3E-41 2.8E-46 325.2 8.7 257 374-689 16-288 (411)
59 PHA02988 hypothetical protein; 100.0 2E-39 4.3E-44 338.3 25.5 261 361-651 11-281 (283)
60 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 2.2E-40 4.7E-45 354.0 18.5 197 375-586 1-201 (333)
61 KOG0666 Cyclin C-dependent kin 100.0 3.1E-41 6.8E-46 328.2 10.8 296 373-693 22-346 (438)
62 cd05590 STKc_nPKC_eta Catalyti 100.0 3.8E-40 8.3E-45 349.9 20.0 194 381-586 1-199 (320)
63 cd05593 STKc_PKB_gamma Catalyt 100.0 2.7E-40 5.9E-45 352.2 18.7 194 381-586 1-198 (328)
64 cd05595 STKc_PKB_beta Catalyti 100.0 2.8E-40 6.1E-45 351.4 18.8 195 381-587 1-199 (323)
65 cd05605 STKc_GRK4_like Catalyt 100.0 5.3E-40 1.2E-44 343.0 20.4 200 376-586 1-204 (285)
66 cd07868 STKc_CDK8 Catalytic do 100.0 3.6E-40 7.9E-45 349.7 19.2 282 380-687 6-317 (317)
67 cd05614 STKc_MSK2_N N-terminal 100.0 4.5E-40 9.6E-45 351.4 20.0 199 376-585 1-209 (332)
68 PHA03211 serine/threonine kina 100.0 7E-40 1.5E-44 360.9 22.1 283 374-689 168-460 (461)
69 cd05599 STKc_NDR_like Catalyti 100.0 2.9E-40 6.3E-45 357.5 18.6 208 375-587 1-243 (364)
70 cd05596 STKc_ROCK Catalytic do 100.0 3.3E-40 7.2E-45 357.2 18.5 263 372-692 40-312 (370)
71 cd05621 STKc_ROCK2 Catalytic d 100.0 4.8E-40 1E-44 355.6 19.6 205 370-586 38-250 (370)
72 cd05618 STKc_aPKC_iota Catalyt 100.0 5.5E-40 1.2E-44 350.0 19.4 192 381-584 1-197 (329)
73 cd07872 STKc_PCTAIRE2 Catalyti 100.0 8.6E-40 1.9E-44 345.6 20.5 287 375-693 6-295 (309)
74 cd05628 STKc_NDR1 Catalytic do 100.0 1.1E-39 2.3E-44 352.7 21.4 207 375-586 1-239 (363)
75 cd05608 STKc_GRK1 Catalytic do 100.0 7.4E-40 1.6E-44 341.0 19.2 194 383-586 1-200 (280)
76 cd05584 STKc_p70S6K Catalytic 100.0 6.6E-40 1.4E-44 348.6 19.0 195 381-587 2-204 (323)
77 cd05629 STKc_NDR_like_fungal C 100.0 5.6E-40 1.2E-44 356.9 18.4 207 375-586 1-251 (377)
78 cd05064 PTKc_EphR_A10 Catalyti 100.0 4.1E-39 8.9E-44 332.8 23.6 256 374-649 4-265 (266)
79 cd05594 STKc_PKB_alpha Catalyt 100.0 4.4E-40 9.6E-45 350.3 16.7 194 381-586 1-199 (325)
80 cd07876 STKc_JNK2 Catalytic do 100.0 2.1E-39 4.6E-44 350.0 22.3 290 373-689 19-320 (359)
81 KOG0032 Ca2+/calmodulin-depend 100.0 1.7E-39 3.6E-44 345.9 21.1 260 374-693 34-302 (382)
82 cd05626 STKc_LATS2 Catalytic d 100.0 1.4E-39 3.1E-44 354.1 20.5 207 376-587 2-252 (381)
83 KOG4278 Protein tyrosine kinas 100.0 2.8E-40 6E-45 345.8 14.1 265 367-652 259-526 (1157)
84 KOG3653 Transforming growth fa 100.0 1.2E-38 2.6E-43 326.9 25.8 268 376-655 211-509 (534)
85 PLN00034 mitogen-activated pro 100.0 1.4E-39 3E-44 350.5 19.6 257 376-695 75-339 (353)
86 cd05588 STKc_aPKC Catalytic do 100.0 1.5E-39 3.3E-44 346.7 19.7 192 381-584 1-197 (329)
87 PF07714 Pkinase_Tyr: Protein 100.0 2E-39 4.4E-44 333.8 19.7 250 379-646 3-259 (259)
88 cd05096 PTKc_DDR1 Catalytic do 100.0 1.1E-38 2.3E-43 336.4 25.5 261 374-647 4-303 (304)
89 KOG0201 Serine/threonine prote 100.0 1.7E-40 3.7E-45 338.4 11.3 249 374-644 12-262 (467)
90 cd05573 STKc_ROCK_NDR_like Cat 100.0 5.9E-40 1.3E-44 353.1 16.1 208 375-587 1-234 (350)
91 PHA03209 serine/threonine kina 100.0 4E-39 8.6E-44 347.3 22.2 288 373-689 64-356 (357)
92 cd05587 STKc_cPKC Catalytic do 100.0 3.5E-39 7.6E-44 343.3 21.4 200 376-587 1-205 (324)
93 cd05601 STKc_CRIK Catalytic do 100.0 1E-39 2.3E-44 348.3 17.4 203 375-587 1-213 (330)
94 cd05625 STKc_LATS1 Catalytic d 100.0 1.5E-39 3.1E-44 354.3 18.8 207 376-587 2-252 (382)
95 cd07875 STKc_JNK1 Catalytic do 100.0 4.7E-39 1E-43 348.0 22.6 290 373-689 22-323 (364)
96 cd05589 STKc_PKN Catalytic dom 100.0 2E-39 4.4E-44 345.1 19.3 238 377-638 1-245 (324)
97 cd05619 STKc_nPKC_theta Cataly 100.0 4.2E-39 9E-44 341.3 21.6 283 381-694 1-288 (316)
98 KOG0589 Serine/threonine prote 100.0 1.4E-39 2.9E-44 341.1 17.4 251 375-645 4-258 (426)
99 cd05072 PTKc_Lyn Catalytic dom 100.0 6.3E-39 1.4E-43 330.2 22.0 256 373-648 4-260 (261)
100 KOG1989 ARK protein kinase fam 100.0 3E-39 6.5E-44 357.0 20.7 267 373-654 35-316 (738)
101 PTZ00036 glycogen synthase kin 100.0 4.3E-39 9.3E-44 355.7 21.9 277 374-690 65-357 (440)
102 cd05104 PTKc_Kit Catalytic dom 100.0 5.9E-39 1.3E-43 348.1 22.5 259 373-648 33-373 (375)
103 cd05620 STKc_nPKC_delta Cataly 100.0 3.6E-39 7.9E-44 341.8 20.2 194 381-586 1-199 (316)
104 cd05575 STKc_SGK Catalytic dom 100.0 4.4E-39 9.5E-44 342.3 20.9 194 381-586 1-199 (323)
105 cd07863 STKc_CDK4 Catalytic do 100.0 2.6E-39 5.6E-44 338.1 18.7 277 376-687 1-288 (288)
106 cd05114 PTKc_Tec_Rlk Catalytic 100.0 1.3E-38 2.7E-43 327.1 23.2 251 375-646 4-255 (256)
107 cd05598 STKc_LATS Catalytic do 100.0 1.3E-39 2.9E-44 353.9 16.7 208 375-587 1-248 (376)
108 KOG0611 Predicted serine/threo 100.0 3.5E-40 7.5E-45 330.4 11.1 199 374-585 52-255 (668)
109 cd05148 PTKc_Srm_Brk Catalytic 100.0 6.2E-39 1.3E-43 330.2 20.5 256 373-648 4-260 (261)
110 cd05607 STKc_GRK7 Catalytic do 100.0 9.1E-39 2E-43 332.3 21.8 253 383-691 1-261 (277)
111 cd05622 STKc_ROCK1 Catalytic d 100.0 4.2E-39 9.1E-44 348.6 19.9 209 367-587 35-251 (371)
112 cd05617 STKc_aPKC_zeta Catalyt 100.0 5.4E-39 1.2E-43 342.2 20.2 193 381-585 1-198 (327)
113 cd05591 STKc_nPKC_epsilon Cata 100.0 3.4E-39 7.3E-44 342.9 18.5 195 381-587 1-200 (321)
114 PHA03207 serine/threonine kina 100.0 5.5E-39 1.2E-43 350.5 20.6 285 374-691 91-382 (392)
115 cd07874 STKc_JNK3 Catalytic do 100.0 2.4E-39 5.2E-44 349.1 17.4 292 372-690 14-317 (355)
116 cd05106 PTKc_CSF-1R Catalytic 100.0 8.9E-39 1.9E-43 346.4 21.8 263 371-650 34-373 (374)
117 cd05048 PTKc_Ror Catalytic Dom 100.0 2E-38 4.4E-43 330.5 23.7 256 375-648 5-282 (283)
118 cd05570 STKc_PKC Catalytic dom 100.0 6.2E-39 1.3E-43 340.4 20.0 195 381-587 1-200 (318)
119 cd05052 PTKc_Abl Catalytic dom 100.0 1.8E-38 3.9E-43 327.3 22.8 255 375-649 6-262 (263)
120 KOG4257 Focal adhesion tyrosin 100.0 2.9E-39 6.4E-44 339.0 17.0 261 370-651 384-651 (974)
121 cd05630 STKc_GRK6 Catalytic do 100.0 8.5E-39 1.8E-43 333.9 20.3 258 376-690 1-267 (285)
122 cd05068 PTKc_Frk_like Catalyti 100.0 2.5E-38 5.4E-43 325.9 23.3 256 373-648 4-260 (261)
123 cd05604 STKc_SGK3 Catalytic do 100.0 3.6E-39 7.8E-44 343.3 17.6 194 381-586 1-199 (325)
124 cd05597 STKc_DMPK_like Catalyt 100.0 9.5E-39 2.1E-43 340.9 20.6 202 375-586 1-211 (331)
125 cd05616 STKc_cPKC_beta Catalyt 100.0 1.1E-38 2.4E-43 339.3 21.0 241 376-639 1-246 (323)
126 KOG0662 Cyclin-dependent kinas 100.0 8.4E-40 1.8E-44 294.7 10.2 282 376-691 3-290 (292)
127 KOG2345 Serine/threonine prote 100.0 2.5E-39 5.3E-44 306.6 13.6 268 372-649 18-300 (302)
128 cd05627 STKc_NDR2 Catalytic do 100.0 4.2E-39 9.2E-44 347.7 17.5 207 375-586 1-239 (360)
129 cd06615 PKc_MEK Catalytic doma 100.0 3.9E-38 8.4E-43 332.8 24.0 284 375-690 1-293 (308)
130 PTZ00267 NIMA-related protein 100.0 4.2E-38 9.1E-43 351.7 25.5 251 376-644 68-322 (478)
131 KOG1025 Epidermal growth facto 100.0 9.1E-39 2E-43 344.7 19.3 253 379-651 700-959 (1177)
132 cd05582 STKc_RSK_N N-terminal 100.0 3.5E-39 7.6E-44 342.3 15.6 238 381-641 2-245 (318)
133 cd05049 PTKc_Trk Catalytic dom 100.0 3.3E-38 7.1E-43 328.3 22.4 256 374-647 4-279 (280)
134 cd05093 PTKc_TrkB Catalytic do 100.0 6E-38 1.3E-42 328.1 24.5 262 374-653 4-283 (288)
135 cd05094 PTKc_TrkC Catalytic do 100.0 6.6E-38 1.4E-42 328.2 24.8 261 375-653 5-286 (291)
136 cd07867 STKc_CDC2L6 Catalytic 100.0 2.4E-38 5.1E-43 335.7 21.6 197 380-586 6-219 (317)
137 cd05615 STKc_cPKC_alpha Cataly 100.0 1.5E-38 3.2E-43 338.2 20.0 241 376-639 1-246 (323)
138 cd08227 PK_STRAD_alpha Pseudok 100.0 1.7E-38 3.7E-43 338.4 20.5 206 379-587 2-214 (327)
139 cd05113 PTKc_Btk_Bmx Catalytic 100.0 4.2E-38 9.2E-43 323.3 22.7 251 375-646 4-255 (256)
140 KOG2052 Activin A type IB rece 100.0 5.2E-38 1.1E-42 319.9 22.9 260 375-651 211-505 (513)
141 cd05071 PTKc_Src Catalytic dom 100.0 6.8E-38 1.5E-42 322.9 24.1 256 374-650 5-261 (262)
142 cd05632 STKc_GRK5 Catalytic do 100.0 2.7E-38 5.9E-43 330.1 21.0 201 376-587 1-205 (285)
143 cd07873 STKc_PCTAIRE1 Catalyti 100.0 1.6E-38 3.5E-43 334.6 19.3 283 375-689 6-291 (301)
144 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 5.4E-38 1.2E-42 323.1 22.8 254 374-648 5-259 (260)
145 cd05105 PTKc_PDGFR_alpha Catal 100.0 6.5E-38 1.4E-42 341.2 24.6 262 372-650 34-398 (400)
146 cd07878 STKc_p38beta_MAPK11 Ca 100.0 2.1E-38 4.6E-43 340.0 20.5 282 372-690 12-304 (343)
147 cd05592 STKc_nPKC_theta_delta 100.0 4.7E-38 1E-42 333.2 22.4 283 381-695 1-289 (316)
148 cd05062 PTKc_IGF-1R Catalytic 100.0 5.6E-38 1.2E-42 326.3 22.2 258 372-647 3-276 (277)
149 cd05033 PTKc_EphR Catalytic do 100.0 1.4E-37 3.1E-42 321.1 24.8 257 374-649 3-265 (266)
150 cd05623 STKc_MRCK_alpha Cataly 100.0 2.5E-38 5.4E-43 337.8 19.4 202 375-586 1-211 (332)
151 cd05067 PTKc_Lck_Blk Catalytic 100.0 1E-37 2.3E-42 321.0 22.8 255 373-648 4-259 (260)
152 cd07832 STKc_CCRK Catalytic do 100.0 3E-38 6.5E-43 329.5 18.9 282 376-688 1-286 (286)
153 cd05602 STKc_SGK1 Catalytic do 100.0 2.8E-38 6.2E-43 336.4 19.0 240 381-643 1-245 (325)
154 cd05059 PTKc_Tec_like Catalyti 100.0 1.2E-37 2.5E-42 319.9 22.8 251 375-646 4-255 (256)
155 cd05603 STKc_SGK2 Catalytic do 100.0 3.7E-38 8E-43 335.0 19.7 237 381-640 1-242 (321)
156 cd07844 STKc_PCTAIRE_like Cata 100.0 1E-37 2.2E-42 326.6 22.8 282 375-687 5-291 (291)
157 cd05090 PTKc_Ror1 Catalytic do 100.0 1.5E-37 3.3E-42 324.1 23.7 256 375-648 5-282 (283)
158 cd07861 STKc_CDK1_euk Catalyti 100.0 7.5E-38 1.6E-42 326.5 21.5 279 376-687 1-285 (285)
159 cd05108 PTKc_EGFR Catalytic do 100.0 1.5E-37 3.2E-42 329.7 23.8 258 374-651 6-270 (316)
160 cd08529 STKc_FA2-like Catalyti 100.0 2.3E-37 5E-42 317.3 24.5 249 376-644 1-252 (256)
161 cd08228 STKc_Nek6 Catalytic do 100.0 4.6E-37 1E-41 317.3 26.7 257 375-649 2-265 (267)
162 cd05034 PTKc_Src_like Catalyti 100.0 1.6E-37 3.5E-42 319.6 23.0 257 372-648 3-260 (261)
163 cd07839 STKc_CDK5 Catalytic do 100.0 4.1E-38 8.8E-43 328.4 18.7 280 376-687 1-284 (284)
164 cd05069 PTKc_Yes Catalytic dom 100.0 2.8E-37 6.1E-42 317.9 24.7 253 375-648 6-259 (260)
165 cd05054 PTKc_VEGFR Catalytic d 100.0 1.1E-37 2.4E-42 333.3 21.9 262 373-651 5-335 (337)
166 PTZ00283 serine/threonine prot 100.0 1.4E-37 3E-42 347.9 23.3 257 371-645 28-297 (496)
167 cd05624 STKc_MRCK_beta Catalyt 100.0 4.6E-38 1E-42 335.6 18.5 203 375-587 1-212 (331)
168 KOG0986 G protein-coupled rece 100.0 5E-39 1.1E-43 327.2 10.2 205 372-587 182-390 (591)
169 cd05099 PTKc_FGFR4 Catalytic d 100.0 3.3E-37 7.2E-42 326.6 24.6 281 372-673 9-314 (314)
170 cd05091 PTKc_Ror2 Catalytic do 100.0 1.4E-37 3.1E-42 324.1 21.4 255 376-648 6-282 (283)
171 cd07860 STKc_CDK2_3 Catalytic 100.0 1.6E-37 3.4E-42 324.0 21.4 279 376-687 1-284 (284)
172 cd05053 PTKc_FGFR Catalytic do 100.0 1.9E-37 4.2E-42 324.9 21.9 264 369-650 6-292 (293)
173 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 5.7E-37 1.2E-41 319.7 25.2 265 376-650 4-282 (283)
174 cd05111 PTK_HER3 Pseudokinase 100.0 5.7E-37 1.2E-41 319.1 24.7 259 375-653 7-272 (279)
175 cd07870 STKc_PFTAIRE2 Catalyti 100.0 3E-37 6.6E-42 323.1 22.7 283 373-687 3-291 (291)
176 cd08219 STKc_Nek3 Catalytic do 100.0 5.6E-37 1.2E-41 314.5 23.9 250 376-645 1-252 (255)
177 cd05092 PTKc_TrkA Catalytic do 100.0 3.7E-37 8E-42 320.7 22.9 255 375-647 5-279 (280)
178 cd05039 PTKc_Csk_like Catalyti 100.0 5.9E-37 1.3E-41 314.6 24.0 250 374-648 5-255 (256)
179 cd05115 PTKc_Zap-70 Catalytic 100.0 6.5E-37 1.4E-41 314.7 24.4 249 382-649 2-255 (257)
180 cd05061 PTKc_InsR Catalytic do 100.0 3.9E-37 8.4E-42 321.9 23.1 260 372-649 3-278 (288)
181 cd07847 STKc_CDKL1_4 Catalytic 100.0 1.1E-37 2.4E-42 325.2 18.8 279 375-687 1-286 (286)
182 cd06619 PKc_MKK5 Catalytic dom 100.0 2E-37 4.3E-42 322.6 20.6 260 375-694 1-263 (279)
183 cd05035 PTKc_Axl_like Catalyti 100.0 6.3E-37 1.4E-41 317.2 24.1 255 377-649 1-272 (273)
184 cd05063 PTKc_EphR_A2 Catalytic 100.0 7.6E-37 1.7E-41 316.0 24.6 258 374-649 4-267 (268)
185 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 1.6E-36 3.5E-41 313.0 27.1 258 375-650 2-266 (267)
186 cd05043 PTK_Ryk Pseudokinase d 100.0 5.7E-37 1.2E-41 319.2 23.7 261 373-651 4-278 (280)
187 cd05089 PTKc_Tie1 Catalytic do 100.0 5.9E-37 1.3E-41 322.0 23.8 258 375-653 2-279 (297)
188 cd05036 PTKc_ALK_LTK Catalytic 100.0 4.6E-37 9.9E-42 319.4 22.7 257 373-647 4-276 (277)
189 cd05082 PTKc_Csk Catalytic dom 100.0 6.8E-37 1.5E-41 314.2 23.6 249 374-648 5-255 (256)
190 cd05586 STKc_Sck1_like Catalyt 100.0 3.4E-38 7.3E-43 336.6 14.4 192 383-586 1-200 (330)
191 cd05084 PTKc_Fes Catalytic dom 100.0 5.5E-37 1.2E-41 314.0 22.8 248 381-647 1-251 (252)
192 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 7E-37 1.5E-41 319.1 24.0 265 375-649 4-283 (284)
193 cd05101 PTKc_FGFR2 Catalytic d 100.0 7.7E-37 1.7E-41 322.3 24.4 263 372-652 12-299 (304)
194 cd07841 STKc_CDK7 Catalytic do 100.0 1.3E-37 2.9E-42 326.9 18.5 283 376-692 1-290 (298)
195 cd05032 PTKc_InsR_like Catalyt 100.0 3.5E-37 7.6E-42 320.0 21.4 257 373-647 4-276 (277)
196 cd05107 PTKc_PDGFR_beta Cataly 100.0 5.8E-37 1.3E-41 333.6 23.9 265 369-650 31-400 (401)
197 KOG0199 ACK and related non-re 100.0 5.4E-38 1.2E-42 333.4 15.2 250 379-646 114-369 (1039)
198 KOG0671 LAMMER dual specificit 100.0 2.8E-39 6E-44 324.2 5.0 290 373-691 87-413 (415)
199 PHA03210 serine/threonine kina 100.0 8.4E-38 1.8E-42 350.6 17.5 293 373-693 146-463 (501)
200 cd05116 PTKc_Syk Catalytic dom 100.0 8.8E-37 1.9E-41 313.6 23.6 248 382-649 2-255 (257)
201 cd07843 STKc_CDC2L1 Catalytic 100.0 1.8E-37 4E-42 325.1 18.8 281 375-687 5-293 (293)
202 cd07842 STKc_CDK8_like Catalyt 100.0 3.2E-37 7E-42 326.7 20.9 284 376-687 1-316 (316)
203 cd07850 STKc_JNK Catalytic dom 100.0 2.9E-37 6.3E-42 332.6 20.8 290 373-689 14-316 (353)
204 cd05073 PTKc_Hck Catalytic dom 100.0 7.9E-37 1.7E-41 314.6 23.1 255 373-648 4-259 (260)
205 PF00069 Pkinase: Protein kina 100.0 6.9E-38 1.5E-42 321.8 15.1 198 377-586 1-202 (260)
206 cd05045 PTKc_RET Catalytic dom 100.0 1.1E-36 2.5E-41 318.7 24.6 258 376-651 1-288 (290)
207 cd05085 PTKc_Fer Catalytic dom 100.0 1.3E-36 2.8E-41 310.8 24.4 247 381-647 1-249 (250)
208 cd05098 PTKc_FGFR1 Catalytic d 100.0 9.1E-37 2E-41 322.2 23.9 261 374-652 17-302 (307)
209 cd06655 STKc_PAK2 Catalytic do 100.0 1E-37 2.2E-42 327.6 16.5 264 375-698 19-283 (296)
210 cd06646 STKc_MAP4K5 Catalytic 100.0 1E-36 2.3E-41 314.8 23.6 201 374-586 8-212 (267)
211 cd06637 STKc_TNIK Catalytic do 100.0 6.8E-37 1.5E-41 317.0 22.1 204 372-586 3-219 (272)
212 cd05075 PTKc_Axl Catalytic dom 100.0 1.3E-36 2.9E-41 314.8 24.2 255 377-649 1-271 (272)
213 cd07845 STKc_CDK10 Catalytic d 100.0 3.6E-37 7.8E-42 325.5 20.2 287 374-692 6-298 (309)
214 cd05055 PTKc_PDGFR Catalytic d 100.0 1.4E-36 3.1E-41 319.9 24.5 260 373-649 33-301 (302)
215 cd05110 PTKc_HER4 Catalytic do 100.0 1.3E-36 2.8E-41 320.4 24.1 287 374-691 6-299 (303)
216 cd05574 STKc_phototropin_like 100.0 6E-37 1.3E-41 324.9 21.7 268 375-693 1-298 (316)
217 cd07846 STKc_CDKL2_3 Catalytic 100.0 7.1E-38 1.5E-42 326.8 14.2 280 375-687 1-286 (286)
218 cd08229 STKc_Nek7 Catalytic do 100.0 1.7E-36 3.7E-41 313.1 24.3 257 375-649 2-265 (267)
219 cd05066 PTKc_EphR_A Catalytic 100.0 1.6E-36 3.4E-41 313.6 24.0 258 374-649 3-266 (267)
220 cd05088 PTKc_Tie2 Catalytic do 100.0 8.6E-37 1.9E-41 321.8 22.4 258 374-652 6-283 (303)
221 cd06654 STKc_PAK1 Catalytic do 100.0 2.5E-36 5.4E-41 317.1 25.8 200 375-587 20-220 (296)
222 PRK13184 pknD serine/threonine 100.0 2.3E-36 4.9E-41 346.9 27.1 270 375-655 2-296 (932)
223 cd05050 PTKc_Musk Catalytic do 100.0 1E-36 2.2E-41 318.7 22.3 257 373-647 3-287 (288)
224 cd06658 STKc_PAK5 Catalytic do 100.0 3.6E-37 7.7E-42 322.8 18.7 259 377-695 24-283 (292)
225 cd06610 STKc_OSR1_SPAK Catalyt 100.0 7.4E-37 1.6E-41 315.4 20.5 263 375-687 1-267 (267)
226 cd05056 PTKc_FAK Catalytic dom 100.0 2.2E-36 4.8E-41 313.0 24.0 257 374-651 5-267 (270)
227 cd05580 STKc_PKA Catalytic dom 100.0 1E-36 2.2E-41 319.1 21.4 198 375-587 1-202 (290)
228 cd06625 STKc_MEKK3_like Cataly 100.0 2.5E-36 5.3E-41 311.1 23.9 203 375-586 2-210 (263)
229 cd05109 PTKc_HER2 Catalytic do 100.0 2.7E-36 5.7E-41 314.0 24.4 258 374-651 6-270 (279)
230 cd05060 PTKc_Syk_like Catalyti 100.0 2.8E-36 6E-41 309.8 24.0 249 381-649 1-255 (257)
231 cd05040 PTKc_Ack_like Catalyti 100.0 3.5E-36 7.6E-41 308.9 24.6 250 381-647 1-256 (257)
232 cd08218 STKc_Nek1 Catalytic do 100.0 2.4E-36 5.2E-41 309.9 23.4 201 376-586 1-204 (256)
233 cd05058 PTKc_Met_Ron Catalytic 100.0 3E-36 6.5E-41 310.4 24.1 254 381-651 1-261 (262)
234 cd05100 PTKc_FGFR3 Catalytic d 100.0 4.2E-36 9.2E-41 321.0 26.1 266 370-653 7-297 (334)
235 cd06624 STKc_ASK Catalytic dom 100.0 3.9E-36 8.5E-41 310.7 25.0 205 370-585 3-213 (268)
236 cd05103 PTKc_VEGFR2 Catalytic 100.0 1.6E-36 3.5E-41 325.3 22.8 261 374-651 6-341 (343)
237 cd05097 PTKc_DDR_like Catalyti 100.0 2.2E-36 4.7E-41 317.4 23.3 261 374-647 4-294 (295)
238 cd08223 STKc_Nek4 Catalytic do 100.0 3.9E-36 8.4E-41 308.5 24.6 200 376-585 1-204 (257)
239 cd05065 PTKc_EphR_B Catalytic 100.0 2.5E-36 5.4E-41 312.4 23.3 259 375-649 4-268 (269)
240 KOG0574 STE20-like serine/thre 100.0 1.2E-38 2.6E-43 308.4 5.4 246 376-644 34-282 (502)
241 cd07837 STKc_CdkB_plant Cataly 100.0 1.1E-36 2.3E-41 319.5 20.7 281 375-688 1-295 (295)
242 cd05112 PTKc_Itk Catalytic dom 100.0 2.9E-36 6.3E-41 309.3 23.3 251 375-646 4-255 (256)
243 cd05051 PTKc_DDR Catalytic dom 100.0 3.9E-36 8.4E-41 315.4 24.7 263 374-647 4-295 (296)
244 cd08221 STKc_Nek9 Catalytic do 100.0 3.6E-36 7.7E-41 308.7 23.8 249 376-644 1-252 (256)
245 KOG0577 Serine/threonine prote 100.0 7.8E-38 1.7E-42 326.4 11.5 243 376-644 27-277 (948)
246 cd05047 PTKc_Tie Catalytic dom 100.0 3.4E-36 7.4E-41 311.7 23.8 249 381-650 1-269 (270)
247 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 3.1E-36 6.6E-41 314.4 23.0 267 375-649 4-283 (284)
248 KOG0607 MAP kinase-interacting 100.0 2E-37 4.3E-42 302.6 12.9 286 366-692 74-369 (463)
249 KOG0584 Serine/threonine prote 100.0 8.8E-38 1.9E-42 331.7 11.3 250 380-690 45-302 (632)
250 cd05095 PTKc_DDR2 Catalytic do 100.0 5.1E-36 1.1E-40 314.7 24.7 263 374-647 4-295 (296)
251 cd00192 PTKc Catalytic domain 100.0 4.1E-36 8.9E-41 308.5 23.4 248 381-646 1-261 (262)
252 cd07864 STKc_CDK12 Catalytic d 100.0 9.5E-37 2.1E-41 321.0 19.1 276 372-687 4-302 (302)
253 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 3.7E-36 8E-41 310.1 22.8 239 381-646 1-261 (262)
254 PHA03390 pk1 serine/threonine- 100.0 2.1E-36 4.5E-41 312.8 20.9 254 369-689 8-267 (267)
255 cd06631 STKc_YSK4 Catalytic do 100.0 8.9E-36 1.9E-40 307.5 25.5 205 376-586 1-211 (265)
256 cd06643 STKc_SLK Catalytic dom 100.0 7.6E-36 1.7E-40 311.0 25.1 199 377-586 7-211 (282)
257 cd06628 STKc_MAPKKK_Byr2_like 100.0 6.8E-36 1.5E-40 308.6 24.3 205 376-586 1-215 (267)
258 KOG0690 Serine/threonine prote 100.0 2.7E-38 5.9E-43 309.0 5.8 271 374-706 167-446 (516)
259 KOG4717 Serine/threonine prote 100.0 2.2E-37 4.7E-42 318.5 12.5 256 375-692 18-278 (864)
260 cd07840 STKc_CDK9_like Catalyt 100.0 1.5E-36 3.2E-41 316.7 19.1 280 377-687 1-287 (287)
261 cd06659 STKc_PAK6 Catalytic do 100.0 1.6E-36 3.5E-41 318.6 19.5 194 380-586 26-220 (297)
262 cd07835 STKc_CDK1_like Catalyt 100.0 2.9E-36 6.2E-41 314.3 21.2 278 377-687 1-283 (283)
263 cd07833 STKc_CDKL Catalytic do 100.0 1E-36 2.2E-41 318.3 17.8 279 375-687 1-288 (288)
264 cd05578 STKc_Yank1 Catalytic d 100.0 6.8E-37 1.5E-41 314.5 16.0 252 376-687 1-258 (258)
265 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 8.4E-36 1.8E-40 308.5 24.3 253 381-647 1-268 (269)
266 cd06656 STKc_PAK3 Catalytic do 100.0 7.1E-36 1.5E-40 313.8 24.1 199 375-586 19-218 (297)
267 cd05577 STKc_GRK Catalytic dom 100.0 1.3E-36 2.9E-41 316.0 18.3 253 383-692 1-262 (277)
268 cd05057 PTKc_EGFR_like Catalyt 100.0 1.1E-35 2.4E-40 309.3 25.2 257 375-651 7-270 (279)
269 cd07865 STKc_CDK9 Catalytic do 100.0 2.6E-36 5.7E-41 318.7 20.6 286 374-687 11-310 (310)
270 cd07836 STKc_Pho85 Catalytic d 100.0 4.9E-36 1.1E-40 312.6 22.3 280 376-687 1-284 (284)
271 KOG0579 Ste20-like serine/thre 100.0 4.5E-38 9.7E-43 329.8 6.8 259 375-691 32-296 (1187)
272 cd07849 STKc_ERK1_2_like Catal 100.0 2.3E-36 5.1E-41 323.3 20.2 289 374-693 4-301 (336)
273 cd06617 PKc_MKK3_6 Catalytic d 100.0 1.9E-36 4.1E-41 315.5 19.1 259 375-692 1-269 (283)
274 PLN00009 cyclin-dependent kina 100.0 2.6E-36 5.6E-41 316.6 20.1 284 375-690 2-290 (294)
275 cd06630 STKc_MEKK1 Catalytic d 100.0 1.5E-36 3.3E-41 313.6 17.9 260 376-688 1-268 (268)
276 cd05041 PTKc_Fes_like Catalyti 100.0 1.1E-35 2.3E-40 304.2 24.0 248 381-647 1-250 (251)
277 cd06613 STKc_MAP4K3_like Catal 100.0 2.1E-35 4.6E-40 303.8 26.3 203 374-587 2-208 (262)
278 cd06609 STKc_MST3_like Catalyt 100.0 7.4E-36 1.6E-40 309.7 22.9 199 375-586 1-201 (274)
279 cd05083 PTKc_Chk Catalytic dom 100.0 5.8E-36 1.3E-40 306.9 21.7 246 375-647 6-252 (254)
280 cd06648 STKc_PAK_II Catalytic 100.0 9.5E-36 2.1E-40 311.0 23.7 256 376-691 20-276 (285)
281 KOG0669 Cyclin T-dependent kin 100.0 1.1E-38 2.3E-43 302.1 1.3 291 375-693 17-324 (376)
282 cd06612 STKc_MST1_2 Catalytic 100.0 1.3E-35 2.9E-40 304.2 24.3 200 374-586 2-202 (256)
283 KOG0612 Rho-associated, coiled 100.0 1.3E-37 2.7E-42 347.3 9.9 276 367-704 67-356 (1317)
284 cd06645 STKc_MAP4K3 Catalytic 100.0 6.9E-36 1.5E-40 308.6 22.2 200 375-586 9-212 (267)
285 KOG4279 Serine/threonine prote 100.0 6.5E-37 1.4E-41 324.3 14.7 246 381-644 581-831 (1226)
286 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 2.8E-36 6E-41 310.1 19.0 239 381-646 1-257 (258)
287 cd06644 STKc_STK10_LOK Catalyt 100.0 2.1E-35 4.6E-40 309.3 26.0 201 374-585 11-217 (292)
288 cd06611 STKc_SLK_like Catalyti 100.0 8.6E-36 1.9E-40 310.3 22.8 202 374-586 4-211 (280)
289 cd08220 STKc_Nek8 Catalytic do 100.0 1.1E-35 2.4E-40 304.7 23.3 200 376-586 1-204 (256)
290 cd05609 STKc_MAST Catalytic do 100.0 8.6E-36 1.9E-40 314.4 23.0 207 375-586 1-219 (305)
291 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 5.7E-36 1.2E-40 310.7 21.3 238 382-646 2-273 (274)
292 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 7.5E-36 1.6E-40 311.7 22.3 199 375-585 1-209 (286)
293 cd06640 STKc_MST4 Catalytic do 100.0 2.2E-35 4.8E-40 306.8 25.6 247 375-644 4-252 (277)
294 PTZ00266 NIMA-related protein 100.0 6.6E-36 1.4E-40 344.2 23.6 259 368-644 6-294 (1021)
295 cd05044 PTKc_c-ros Catalytic d 100.0 6.4E-36 1.4E-40 309.1 21.3 249 381-647 1-268 (269)
296 KOG0604 MAP kinase-activated p 100.0 2.1E-37 4.5E-42 300.4 9.4 261 374-692 60-330 (400)
297 cd06642 STKc_STK25-YSK1 Cataly 100.0 5.8E-36 1.3E-40 311.1 20.9 246 376-644 5-252 (277)
298 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 7.8E-36 1.7E-40 310.9 21.8 267 375-649 4-283 (284)
299 smart00219 TyrKc Tyrosine kina 100.0 1.5E-35 3.3E-40 303.8 23.6 251 377-646 1-258 (258)
300 cd05042 PTKc_Aatyk Catalytic d 100.0 1.7E-35 3.7E-40 306.2 24.0 251 382-646 2-267 (269)
301 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 9.5E-36 2.1E-40 310.7 22.1 199 374-586 4-205 (284)
302 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 9.4E-36 2E-40 311.3 22.1 264 375-692 1-274 (287)
303 cd05633 STKc_GRK3 Catalytic do 100.0 4.3E-36 9.3E-41 312.5 19.4 254 382-696 1-267 (279)
304 cd06651 STKc_MEKK3 Catalytic d 100.0 2.7E-35 6E-40 304.1 25.0 202 375-585 2-211 (266)
305 cd05046 PTK_CCK4 Pseudokinase 100.0 1.2E-35 2.6E-40 308.2 22.5 254 375-647 5-274 (275)
306 cd06638 STKc_myosinIIIA Cataly 100.0 1.1E-35 2.4E-40 310.4 22.0 212 365-587 8-233 (286)
307 cd06636 STKc_MAP4K4_6 Catalyti 100.0 1.4E-35 3E-40 309.0 22.6 209 366-585 7-228 (282)
308 cd07879 STKc_p38delta_MAPK13 C 100.0 4.3E-36 9.4E-41 321.9 18.3 281 374-692 14-305 (342)
309 cd06632 STKc_MEKK1_plant Catal 100.0 3.2E-35 6.9E-40 301.6 23.6 199 376-587 1-206 (258)
310 cd07866 STKc_BUR1 Catalytic do 100.0 4.4E-36 9.5E-41 317.2 17.5 288 374-687 7-311 (311)
311 cd07877 STKc_p38alpha_MAPK14 C 100.0 1.3E-35 2.7E-40 318.7 21.3 286 367-692 9-308 (345)
312 cd06639 STKc_myosinIIIB Cataly 100.0 3.2E-35 7E-40 307.8 23.8 211 365-586 12-236 (291)
313 cd07854 STKc_MAPK4_6 Catalytic 100.0 5.2E-36 1.1E-40 321.3 18.1 284 375-690 5-306 (342)
314 cd06652 STKc_MEKK2 Catalytic d 100.0 5.9E-35 1.3E-39 301.4 25.2 202 375-585 2-211 (265)
315 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 3.5E-35 7.6E-40 301.6 23.1 237 381-646 1-258 (259)
316 cd07831 STKc_MOK Catalytic dom 100.0 8.7E-36 1.9E-40 310.3 18.8 276 377-687 1-282 (282)
317 cd05572 STKc_cGK_PKG Catalytic 100.0 8.9E-36 1.9E-40 306.9 18.6 192 383-587 1-196 (262)
318 cd05074 PTKc_Tyro3 Catalytic d 100.0 3.9E-35 8.4E-40 304.0 23.3 255 377-649 1-272 (273)
319 KOG4236 Serine/threonine prote 100.0 3.1E-37 6.7E-42 318.0 7.2 252 380-691 569-826 (888)
320 cd06626 STKc_MEKK4 Catalytic d 100.0 5E-35 1.1E-39 301.4 23.7 203 376-586 1-209 (264)
321 cd07855 STKc_ERK5 Catalytic do 100.0 5.8E-36 1.2E-40 320.0 17.2 291 374-693 4-303 (334)
322 cd08528 STKc_Nek10 Catalytic d 100.0 4.8E-35 1E-39 302.7 23.5 251 376-647 1-268 (269)
323 cd08217 STKc_Nek2 Catalytic do 100.0 7E-35 1.5E-39 300.0 24.2 202 376-587 1-214 (265)
324 cd06605 PKc_MAPKK Catalytic do 100.0 2.9E-35 6.4E-40 303.4 21.4 199 375-586 1-202 (265)
325 cd05086 PTKc_Aatyk2 Catalytic 100.0 7.6E-35 1.6E-39 301.3 24.3 251 382-646 2-266 (268)
326 cd08225 STKc_Nek5 Catalytic do 100.0 3E-35 6.5E-40 301.8 21.0 200 376-585 1-204 (257)
327 cd05579 STKc_MAST_like Catalyt 100.0 1.3E-35 2.8E-40 305.5 18.2 254 383-689 1-262 (265)
328 cd06608 STKc_myosinIII_like Ca 100.0 8.2E-35 1.8E-39 301.4 23.5 203 373-586 4-221 (275)
329 cd07838 STKc_CDK4_6_like Catal 100.0 1.1E-34 2.4E-39 302.7 24.6 276 377-687 1-287 (287)
330 cd07834 STKc_MAPK Catalytic do 100.0 9.9E-36 2.2E-40 317.6 16.8 295 376-700 1-305 (330)
331 cd05118 STKc_CMGC Catalytic do 100.0 1.9E-35 4E-40 307.9 18.4 278 377-687 1-283 (283)
332 PTZ00024 cyclin-dependent prot 100.0 2.8E-35 6E-40 314.9 20.2 291 375-693 8-322 (335)
333 cd06641 STKc_MST3 Catalytic do 100.0 1.6E-34 3.4E-39 300.4 25.2 246 376-644 5-252 (277)
334 cd06623 PKc_MAPKK_plant_like C 100.0 1.1E-34 2.3E-39 298.8 23.6 201 375-587 1-204 (264)
335 cd06657 STKc_PAK4 Catalytic do 100.0 3.5E-35 7.6E-40 307.7 20.2 253 380-692 25-278 (292)
336 cd06629 STKc_MAPKKK_Bck1_like 100.0 1.5E-34 3.2E-39 299.6 24.6 201 376-586 2-215 (272)
337 cd06917 STKc_NAK1_like Catalyt 100.0 1.3E-34 2.8E-39 300.8 23.9 198 376-586 2-205 (277)
338 cd06647 STKc_PAK_I Catalytic d 100.0 1.2E-34 2.7E-39 303.8 23.5 199 375-586 19-218 (293)
339 cd07858 STKc_TEY_MAPK_plant Ca 100.0 2.5E-35 5.5E-40 315.4 18.5 283 374-693 4-300 (337)
340 cd05606 STKc_beta_ARK Catalyti 100.0 4.2E-35 9.1E-40 304.9 19.6 251 382-693 1-264 (278)
341 cd05581 STKc_PDK1 Catalytic do 100.0 2.1E-35 4.6E-40 306.8 17.3 258 375-687 1-280 (280)
342 cd07880 STKc_p38gamma_MAPK12 C 100.0 6E-35 1.3E-39 313.2 21.0 281 373-690 13-304 (343)
343 KOG0596 Dual specificity; seri 100.0 2.7E-35 5.8E-40 306.9 17.4 204 374-588 360-577 (677)
344 cd07829 STKc_CDK_like Catalyti 100.0 1.2E-35 2.5E-40 309.2 14.8 277 377-687 1-282 (282)
345 cd06607 STKc_TAO Catalytic dom 100.0 4.2E-34 9.1E-39 301.9 26.6 244 375-644 15-266 (307)
346 cd05613 STKc_MSK1_N N-terminal 100.0 7.3E-35 1.6E-39 304.9 20.4 198 376-584 1-209 (290)
347 cd07852 STKc_MAPK15 Catalytic 100.0 3.3E-35 7.2E-40 314.5 18.1 289 374-692 6-303 (337)
348 cd07830 STKc_MAK_like Catalyti 100.0 2.6E-35 5.7E-40 306.9 16.7 279 377-687 1-283 (283)
349 cd06614 STKc_PAK Catalytic dom 100.0 2.3E-34 5E-39 300.5 23.7 203 373-587 17-220 (286)
350 cd08216 PK_STRAD Pseudokinase 100.0 3E-34 6.6E-39 303.8 25.0 292 380-692 7-303 (314)
351 cd05611 STKc_Rim15_like Cataly 100.0 1E-34 2.2E-39 298.7 20.3 248 381-690 2-257 (260)
352 KOG1290 Serine/threonine prote 100.0 6.5E-36 1.4E-40 307.3 11.0 132 374-509 77-221 (590)
353 KOG0983 Mitogen-activated prot 100.0 1.9E-35 4.1E-40 283.3 13.2 247 377-644 94-348 (391)
354 cd05122 PKc_STE Catalytic doma 100.0 5.9E-34 1.3E-38 290.4 24.9 199 376-586 1-200 (253)
355 KOG0200 Fibroblast/platelet-de 100.0 1.1E-34 2.3E-39 330.5 21.5 265 369-651 290-581 (609)
356 cd08215 STKc_Nek Catalytic dom 100.0 3.9E-34 8.4E-39 293.1 23.5 201 376-586 1-206 (258)
357 cd08226 PK_STRAD_beta Pseudoki 100.0 5.4E-34 1.2E-38 303.9 25.5 205 381-588 4-215 (328)
358 KOG4645 MAPKKK (MAP kinase kin 100.0 1.5E-36 3.3E-41 342.8 6.0 254 374-644 1234-1493(1509)
359 PHA02882 putative serine/threo 100.0 6.2E-34 1.3E-38 298.6 25.4 264 374-646 11-293 (294)
360 cd06616 PKc_MKK4 Catalytic dom 100.0 1.9E-34 4.2E-39 301.3 21.3 199 376-586 5-213 (288)
361 cd06606 STKc_MAPKKK Catalytic 100.0 9.6E-34 2.1E-38 290.1 25.5 202 376-587 1-207 (260)
362 KOG1024 Receptor-like protein 100.0 9.8E-35 2.1E-39 290.7 17.1 268 367-652 276-558 (563)
363 cd08530 STKc_CNK2-like Catalyt 100.0 4.4E-34 9.5E-39 292.8 22.4 246 376-643 1-251 (256)
364 cd07851 STKc_p38 Catalytic dom 100.0 5.4E-35 1.2E-39 313.6 16.2 282 373-692 13-306 (343)
365 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 1.4E-34 3E-39 308.3 19.0 287 369-692 4-296 (328)
366 cd06627 STKc_Cdc7_like Catalyt 100.0 8.6E-34 1.9E-38 290.1 24.0 200 376-587 1-203 (254)
367 cd07857 STKc_MPK1 Catalytic do 100.0 2.2E-34 4.8E-39 307.5 20.2 282 376-689 1-297 (332)
368 cd06653 STKc_MEKK3_like_1 Cata 100.0 1.1E-33 2.4E-38 291.8 24.5 202 375-585 2-211 (264)
369 cd06635 STKc_TAO1 Catalytic do 100.0 1.5E-33 3.3E-38 299.0 25.6 244 377-646 27-278 (317)
370 KOG1006 Mitogen-activated prot 100.0 3.4E-36 7.4E-41 287.5 3.8 247 380-644 69-326 (361)
371 KOG0696 Serine/threonine prote 100.0 2.8E-35 6.1E-40 295.9 10.5 205 372-588 346-555 (683)
372 KOG0664 Nemo-like MAPK-related 100.0 1.1E-36 2.4E-41 291.2 0.4 284 378-689 56-348 (449)
373 cd05123 STKc_AGC Catalytic dom 100.0 3.7E-34 8.1E-39 292.4 18.5 192 383-586 1-196 (250)
374 cd06618 PKc_MKK7 Catalytic dom 100.0 1.6E-33 3.6E-38 295.7 23.7 199 374-585 14-220 (296)
375 cd05610 STKc_MASTL Catalytic d 100.0 7.5E-34 1.6E-38 328.4 22.6 146 375-525 4-153 (669)
376 PLN03224 probable serine/threo 100.0 3.7E-34 8.1E-39 314.9 18.9 271 373-689 143-505 (507)
377 KOG1151 Tousled-like protein k 100.0 1.1E-35 2.3E-40 301.0 5.9 276 371-693 459-750 (775)
378 KOG0586 Serine/threonine prote 100.0 1.4E-34 3E-39 307.2 14.5 257 374-693 55-315 (596)
379 KOG0668 Casein kinase II, alph 100.0 3E-35 6.5E-40 275.1 7.7 278 374-692 37-330 (338)
380 cd05583 STKc_MSK_N N-terminal 100.0 1.1E-33 2.3E-38 295.8 20.3 198 376-584 1-209 (288)
381 KOG1035 eIF-2alpha kinase GCN2 100.0 3.4E-34 7.4E-39 322.5 16.1 257 372-644 476-870 (1351)
382 PLN03225 Serine/threonine-prot 100.0 2.6E-34 5.7E-39 324.2 15.3 277 373-692 130-458 (566)
383 cd06634 STKc_TAO2 Catalytic do 100.0 4.2E-33 9.1E-38 294.4 23.5 195 376-586 16-217 (308)
384 KOG0587 Traf2- and Nck-interac 100.0 5.6E-34 1.2E-38 311.7 17.1 259 365-644 9-281 (953)
385 cd08222 STKc_Nek11 Catalytic d 100.0 2E-33 4.3E-38 289.1 19.7 199 376-585 1-207 (260)
386 cd06633 STKc_TAO3 Catalytic do 100.0 9.4E-33 2E-37 292.3 25.4 195 377-587 23-224 (313)
387 KOG0603 Ribosomal protein S6 k 100.0 2E-34 4.4E-39 307.5 12.6 249 374-693 321-573 (612)
388 cd05576 STKc_RPK118_like Catal 100.0 1.4E-33 3.1E-38 286.2 17.3 179 386-584 4-183 (237)
389 KOG0665 Jun-N-terminal kinase 100.0 4E-34 8.6E-39 280.8 10.4 282 374-688 16-314 (369)
390 KOG4250 TANK binding protein k 100.0 1.7E-33 3.7E-38 302.6 15.9 200 377-587 15-228 (732)
391 KOG1167 Serine/threonine prote 100.0 1.3E-33 2.7E-38 287.6 10.5 295 369-688 30-385 (418)
392 KOG0614 cGMP-dependent protein 100.0 1.1E-34 2.4E-39 298.6 2.8 202 374-588 419-624 (732)
393 KOG1027 Serine/threonine prote 100.0 6.4E-34 1.4E-38 309.9 5.6 256 376-692 510-775 (903)
394 KOG0695 Serine/threonine prote 100.0 1.5E-32 3.2E-37 269.7 14.0 202 371-584 246-452 (593)
395 KOG0670 U4/U6-associated splic 100.0 6.2E-34 1.3E-38 293.8 2.5 215 360-588 417-640 (752)
396 KOG0984 Mitogen-activated prot 100.0 3E-32 6.5E-37 251.6 12.4 218 369-597 40-266 (282)
397 KOG0608 Warts/lats-like serine 100.0 1.1E-31 2.3E-36 282.6 15.2 209 375-588 629-876 (1034)
398 smart00220 S_TKc Serine/Threon 100.0 3.2E-30 6.9E-35 261.0 22.7 187 387-586 1-189 (244)
399 KOG1152 Signal transduction se 100.0 5.4E-29 1.2E-33 260.6 10.8 196 375-584 561-770 (772)
400 cd00180 PKc Catalytic domain o 100.0 4.7E-27 1E-31 231.8 22.8 210 383-645 1-214 (215)
401 smart00221 STYKc Protein kinas 100.0 5.6E-27 1.2E-31 234.8 22.3 199 377-585 1-202 (225)
402 KOG0576 Mitogen-activated prot 100.0 4.8E-29 1E-33 265.2 5.3 300 374-694 14-318 (829)
403 KOG1345 Serine/threonine kinas 99.9 1.2E-26 2.5E-31 222.9 11.3 255 374-650 23-289 (378)
404 PLN00181 protein SPA1-RELATED; 99.9 8.7E-26 1.9E-30 267.7 9.9 201 427-644 28-264 (793)
405 KOG0195 Integrin-linked kinase 99.9 2.9E-25 6.2E-30 213.1 7.0 245 380-649 195-446 (448)
406 smart00750 KIND kinase non-cat 99.9 7.9E-24 1.7E-28 204.2 16.7 168 456-650 1-170 (176)
407 PRK09188 serine/threonine prot 99.9 1.6E-23 3.5E-28 221.4 16.1 171 371-557 14-194 (365)
408 KOG1164 Casein kinase (serine/ 99.9 1.8E-22 3.9E-27 214.1 23.4 266 376-653 19-301 (322)
409 KOG1165 Casein kinase (serine/ 99.9 1.9E-21 4.2E-26 192.2 19.6 272 375-662 28-312 (449)
410 KOG0590 Checkpoint kinase and 99.9 4.6E-24 1E-28 240.2 0.2 264 378-691 321-592 (601)
411 COG0515 SPS1 Serine/threonine 99.9 1.4E-20 3E-25 198.5 26.3 262 377-645 2-275 (384)
412 KOG1163 Casein kinase (serine/ 99.9 1.1E-21 2.4E-26 185.7 14.1 271 373-654 13-289 (341)
413 PRK10359 lipopolysaccharide co 99.8 5.2E-21 1.1E-25 188.3 10.1 170 374-577 30-216 (232)
414 cd05147 RIO1_euk RIO kinase fa 99.8 1.1E-20 2.5E-25 183.8 11.6 139 380-526 2-167 (190)
415 KOG1240 Protein kinase contain 99.8 6.7E-22 1.5E-26 221.4 2.0 253 376-647 24-293 (1431)
416 cd05145 RIO1_like RIO kinase f 99.8 1.7E-19 3.7E-24 176.2 15.4 139 380-527 2-168 (190)
417 KOG0603 Ribosomal protein S6 k 99.8 1.5E-21 3.3E-26 209.3 0.5 223 382-637 1-230 (612)
418 PRK12274 serine/threonine prot 99.8 1.9E-19 4.1E-24 173.3 14.7 191 378-585 5-209 (218)
419 KOG1023 Natriuretic peptide re 99.8 6.6E-20 1.4E-24 197.2 10.5 217 425-651 1-226 (484)
420 PRK10345 hypothetical protein; 99.8 2.3E-18 4.9E-23 169.2 15.5 137 377-523 4-156 (210)
421 KOG1166 Mitotic checkpoint ser 99.8 1.3E-18 2.9E-23 199.6 15.0 253 369-651 692-955 (974)
422 PF14531 Kinase-like: Kinase-l 99.8 2.1E-18 4.6E-23 174.9 14.6 230 378-636 15-288 (288)
423 KOG0606 Microtubule-associated 99.8 5.6E-19 1.2E-23 198.3 5.7 172 374-587 82-262 (1205)
424 PRK14879 serine/threonine prot 99.7 3.2E-17 6.9E-22 163.1 14.3 134 381-525 2-143 (211)
425 KOG4158 BRPK/PTEN-induced prot 99.7 3.8E-17 8.1E-22 165.4 13.6 202 429-647 274-512 (598)
426 TIGR03724 arch_bud32 Kae1-asso 99.7 5.6E-17 1.2E-21 159.7 13.6 131 382-526 1-139 (199)
427 cd05144 RIO2_C RIO kinase fami 99.7 5.6E-17 1.2E-21 159.6 13.4 144 369-527 9-176 (198)
428 smart00090 RIO RIO-like kinase 99.7 5.2E-17 1.1E-21 163.6 12.8 142 376-526 29-198 (237)
429 PRK09605 bifunctional UGMP fam 99.7 8.3E-17 1.8E-21 182.3 14.0 140 371-525 329-476 (535)
430 KOG1033 eIF-2alpha kinase PEK/ 99.7 3.4E-17 7.3E-22 172.9 3.9 127 445-578 330-457 (516)
431 cd05120 APH_ChoK_like Aminogly 99.6 5E-15 1.1E-19 138.2 12.8 135 379-525 2-138 (155)
432 cd05119 RIO RIO kinase family, 99.6 3.3E-15 7.2E-20 145.5 12.0 136 380-527 2-165 (187)
433 PRK01723 3-deoxy-D-manno-octul 99.6 1.9E-14 4E-19 145.3 14.7 135 380-525 36-191 (239)
434 KOG0590 Checkpoint kinase and 99.6 2.5E-16 5.4E-21 177.8 -0.7 262 375-689 20-291 (601)
435 KOG0617 Ras suppressor protein 99.5 6.1E-16 1.3E-20 139.7 -1.8 127 2-135 33-162 (264)
436 KOG0617 Ras suppressor protein 99.5 2.1E-15 4.5E-20 136.3 -3.2 132 1-139 55-189 (264)
437 TIGR01982 UbiB 2-polyprenylphe 99.5 3.4E-13 7.4E-18 147.9 12.5 141 380-527 122-308 (437)
438 PLN03150 hypothetical protein; 99.4 3.7E-13 8E-18 154.3 11.8 105 26-135 419-527 (623)
439 KOG0444 Cytoskeletal regulator 99.4 1E-14 2.2E-19 155.0 -2.4 129 1-136 54-186 (1255)
440 KOG1266 Protein kinase [Signal 99.4 4.4E-13 9.6E-18 133.3 8.3 155 423-581 119-280 (458)
441 PLN00113 leucine-rich repeat r 99.4 4E-13 8.7E-18 164.0 9.7 133 1-139 403-539 (968)
442 KOG1243 Protein kinase [Genera 99.4 1E-12 2.3E-17 142.9 9.7 166 396-579 34-199 (690)
443 KOG4194 Membrane glycoprotein 99.4 4.6E-14 9.9E-19 149.4 -1.4 132 1-135 292-428 (873)
444 KOG0444 Cytoskeletal regulator 99.4 1.2E-13 2.5E-18 147.1 0.3 127 3-136 104-258 (1255)
445 KOG0472 Leucine-rich repeat pr 99.3 8.8E-14 1.9E-18 141.4 -3.1 125 2-136 183-310 (565)
446 KOG4237 Extracellular matrix p 99.3 2.8E-13 6E-18 137.7 -1.1 85 67-151 269-374 (498)
447 cd05151 ChoK Choline Kinase (C 99.3 9.9E-12 2.2E-16 118.9 9.6 130 380-524 3-135 (170)
448 PRK04750 ubiB putative ubiquin 99.3 1.2E-11 2.5E-16 137.3 11.4 143 375-528 120-316 (537)
449 KOG4194 Membrane glycoprotein 99.3 1.8E-13 3.9E-18 145.0 -2.8 141 2-150 317-466 (873)
450 KOG0601 Cyclin-dependent kinas 99.3 6.9E-12 1.5E-16 135.6 7.6 248 376-643 115-377 (524)
451 KOG0606 Microtubule-associated 99.2 2.5E-12 5.5E-17 145.5 3.3 269 373-693 802-1101(1205)
452 KOG0472 Leucine-rich repeat pr 99.2 1.3E-12 2.8E-17 133.1 -2.0 122 7-136 417-541 (565)
453 KOG0601 Cyclin-dependent kinas 99.2 1.8E-11 4E-16 132.3 5.7 245 370-643 260-512 (524)
454 PF14580 LRR_9: Leucine-rich r 99.2 2E-11 4.3E-16 115.6 5.0 122 9-140 4-130 (175)
455 KOG0532 Leucine-rich repeat (L 99.1 3.7E-12 7.9E-17 135.2 -1.8 131 4-137 100-248 (722)
456 COG3642 Mn2+-dependent serine/ 99.1 5.8E-10 1.3E-14 103.9 12.8 131 381-525 2-140 (204)
457 cd05146 RIO3_euk RIO kinase fa 99.1 6.9E-10 1.5E-14 107.3 13.9 136 381-527 3-175 (197)
458 KOG3087 Serine/threonine prote 99.1 8.4E-10 1.8E-14 102.2 13.6 143 379-525 11-165 (229)
459 cd05154 ACAD10_11_like Acyl-Co 99.1 3E-10 6.5E-15 113.6 11.7 143 380-525 3-206 (223)
460 KOG0618 Serine/threonine phosp 99.1 4.5E-12 9.7E-17 141.5 -2.5 125 2-135 359-488 (1081)
461 PRK15387 E3 ubiquitin-protein 99.1 8.4E-11 1.8E-15 135.0 7.7 15 3-17 303-317 (788)
462 PF14580 LRR_9: Leucine-rich r 99.1 8.7E-11 1.9E-15 111.3 4.1 119 3-129 20-146 (175)
463 KOG1259 Nischarin, modulator o 99.1 1.6E-11 3.5E-16 120.6 -1.5 127 3-138 285-414 (490)
464 KOG4237 Extracellular matrix p 99.1 1.3E-11 2.8E-16 125.8 -2.3 139 3-147 68-212 (498)
465 PRK15387 E3 ubiquitin-protein 99.0 1.1E-09 2.3E-14 126.1 10.9 17 102-118 343-359 (788)
466 PRK15370 E3 ubiquitin-protein 99.0 4.4E-10 9.6E-15 129.9 7.8 116 4-135 201-316 (754)
467 KOG3741 Poly(A) ribonuclease s 99.0 2.2E-08 4.7E-13 106.3 18.5 168 388-582 289-475 (655)
468 PRK15370 E3 ubiquitin-protein 99.0 5.3E-10 1.1E-14 129.2 7.2 119 2-136 241-359 (754)
469 PRK15123 lipopolysaccharide co 98.9 1.7E-08 3.8E-13 103.1 15.6 141 381-525 28-194 (268)
470 PLN03150 hypothetical protein; 98.9 1.2E-09 2.7E-14 125.5 6.6 89 4-92 420-510 (623)
471 KOG4579 Leucine-rich repeat (L 98.8 8.9E-11 1.9E-15 102.9 -4.4 129 4-140 29-163 (177)
472 PF01163 RIO1: RIO1 family; I 98.8 2.2E-08 4.9E-13 96.4 10.8 125 390-526 1-156 (188)
473 PF13855 LRR_8: Leucine rich r 98.7 6.8E-09 1.5E-13 80.8 3.5 58 26-84 2-61 (61)
474 KOG0618 Serine/threonine phosp 98.7 5.5E-10 1.2E-14 125.1 -4.0 132 3-141 288-448 (1081)
475 COG4248 Uncharacterized protei 98.7 8.7E-07 1.9E-11 92.0 17.5 260 379-654 15-305 (637)
476 PF13855 LRR_8: Leucine rich r 98.7 1.3E-08 2.9E-13 79.2 3.2 58 2-60 1-61 (61)
477 KOG1859 Leucine-rich repeat pr 98.7 3.5E-10 7.6E-15 123.2 -7.9 128 3-141 165-297 (1096)
478 KOG2137 Protein kinase [Signal 98.6 8.8E-09 1.9E-13 113.2 1.8 184 480-677 106-292 (700)
479 COG0478 RIO-like serine/threon 98.6 1.9E-07 4.1E-12 92.5 10.8 136 377-526 93-252 (304)
480 KOG1259 Nischarin, modulator o 98.6 4.9E-09 1.1E-13 103.4 -0.6 106 22-136 281-387 (490)
481 COG4886 Leucine-rich repeat (L 98.6 1.8E-08 3.9E-13 110.3 3.4 131 3-136 141-290 (394)
482 PLN03210 Resistant to P. syrin 98.6 1.4E-07 3.1E-12 116.3 11.5 124 3-134 590-715 (1153)
483 COG4886 Leucine-rich repeat (L 98.6 1.7E-08 3.6E-13 110.5 1.8 128 2-137 116-246 (394)
484 PF06293 Kdo: Lipopolysacchari 98.6 7.2E-07 1.6E-11 88.1 12.9 124 398-526 31-171 (206)
485 PRK09902 hypothetical protein; 98.6 9.4E-07 2E-11 85.7 13.1 138 383-525 26-179 (216)
486 KOG0532 Leucine-rich repeat (L 98.5 1.6E-08 3.5E-13 107.9 0.4 108 4-120 145-253 (722)
487 PLN03210 Resistant to P. syrin 98.5 2.2E-07 4.8E-12 114.7 10.1 99 25-132 778-878 (1153)
488 cd00116 LRR_RI Leucine-rich re 98.5 1.5E-08 3.2E-13 107.4 -1.1 129 3-136 109-263 (319)
489 cd00116 LRR_RI Leucine-rich re 98.5 1.8E-08 3.9E-13 106.7 -1.4 83 3-85 52-150 (319)
490 COG0661 AarF Predicted unusual 98.4 1.1E-06 2.4E-11 97.3 11.4 140 381-528 131-317 (517)
491 TIGR02172 Fb_sc_TIGR02172 Fibr 98.4 7E-06 1.5E-10 82.2 14.0 138 381-524 7-181 (226)
492 COG1718 RIO1 Serine/threonine 98.3 1.4E-05 3.1E-10 78.6 13.4 152 365-527 35-217 (268)
493 KOG3207 Beta-tubulin folding c 98.3 2.2E-07 4.7E-12 96.7 0.4 129 1-135 145-313 (505)
494 PF06176 WaaY: Lipopolysacchar 98.2 1.6E-05 3.4E-10 77.5 13.0 136 374-524 30-182 (229)
495 KOG0531 Protein phosphatase 1, 98.2 2.9E-07 6.4E-12 101.2 0.1 127 2-138 72-201 (414)
496 PF01636 APH: Phosphotransfera 98.2 2E-05 4.4E-10 79.1 13.4 142 380-524 2-196 (239)
497 KOG0576 Mitogen-activated prot 98.2 2.7E-07 5.9E-12 100.4 -0.5 182 380-583 247-430 (829)
498 KOG4579 Leucine-rich repeat (L 98.2 9.9E-08 2.2E-12 84.0 -3.3 105 3-115 54-160 (177)
499 KOG0531 Protein phosphatase 1, 98.1 5.1E-07 1.1E-11 99.3 0.6 127 1-136 94-221 (414)
500 KOG1859 Leucine-rich repeat pr 98.1 8.4E-08 1.8E-12 105.1 -5.7 108 1-117 186-295 (1096)
No 1
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=1.1e-54 Score=527.58 Aligned_cols=513 Identities=24% Similarity=0.399 Sum_probs=343.5
Q ss_pred CCCceEEEeeCCcCCCCCC-CcCCCCcccEEeccCCcCcccCCCcccccCccEEEccCccCCCCCCcccCCCcccceEec
Q 005227 1 MSKLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFI 79 (707)
Q Consensus 1 L~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~L~~N~l~g~ip~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 79 (707)
|++|+.|+|++|++++.++ .+..+++|+.|+|++|++.|.+|......+|+.|+|++|++++.+|..|.++++|+.|+|
T Consensus 427 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~L 506 (968)
T PLN00113 427 LPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSFGSKRLENLDLSRNQFSGAVPRKLGSLSELMQLKL 506 (968)
T ss_pred CCCCCEEECcCCcccCccChhhccCCCCcEEECcCceeeeecCcccccccceEEECcCCccCCccChhhhhhhccCEEEC
Confidence 5689999999999999888 688899999999999999988888665558999999999999999999999999999999
Q ss_pred cCcccccCCCCcccccccCCCCccceEEccCccCCCCCC-CC-CCCCCceeeccCCCccccCCcccccCCCCCCCccccc
Q 005227 80 ANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISG-SF-NIPPNVTVRLRGNPFCLNTNAEQFCGSHSDDDNEIDR 157 (707)
Q Consensus 80 s~N~l~g~~p~~~~~l~~L~~~~l~~L~l~~N~l~~~~~-~~-~~~~l~~l~l~~N~~~~~~~~~~~~~~~~~~~~~~~~ 157 (707)
++|+++|.+|..+.++++|+ +|+|++|.+++..+ .+ .+++|+.|+|++|++....+ ..+.+-.. -..++.
T Consensus 507 s~N~l~~~~p~~~~~l~~L~-----~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~l~~l~~--L~~l~l 578 (968)
T PLN00113 507 SENKLSGEIPDELSSCKKLV-----SLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIP-KNLGNVES--LVQVNI 578 (968)
T ss_pred cCCcceeeCChHHcCccCCC-----EEECCCCcccccCChhHhCcccCCEEECCCCcccccCC-hhHhcCcc--cCEEec
Confidence 99999999999998877666 99999999998644 44 78999999999999864322 11111000 000111
Q ss_pred CCCCCCcccccCCCCCCccCCCCCCccccccceeeEEEecCCCCCCCchhHHHHHHHHhhcccccccceeccceeeecCC
Q 005227 158 STNSTLDCRAQSCPTDYEYSPTSPIRCFCAAPLLVGYRLKSPGLSYFPAYKNLFEEYMTSGLKLNLYQLDIDSFRWEKGP 237 (707)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (707)
+.+ .+.+ ..|....+ ..+
T Consensus 579 s~N-~l~~---~~p~~~~~-------------------------~~~--------------------------------- 596 (968)
T PLN00113 579 SHN-HLHG---SLPSTGAF-------------------------LAI--------------------------------- 596 (968)
T ss_pred cCC-ccee---eCCCcchh-------------------------ccc---------------------------------
Confidence 110 0000 00000000 000
Q ss_pred ccceeeeecccccCCCCCcccccccccceeeeeecccccCCCCCcCCcccccccccCCCCCCCCCCCCCCCcccceeeee
Q 005227 238 RLKMYLKLFPVYDNSSGNSYVFNASEVGRIRSMFTGWNIPDSDIFGPYELINFTLQGPYRDVFPPSRNSGISKAALAGII 317 (707)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ii 317 (707)
+...+.+.... +..++....++......+.. +..++
T Consensus 597 ---------------------------------------~~~~~~~n~~l----c~~~~~~~~~~c~~~~~~~~-~~~~~ 632 (968)
T PLN00113 597 ---------------------------------------NASAVAGNIDL----CGGDTTSGLPPCKRVRKTPS-WWFYI 632 (968)
T ss_pred ---------------------------------------ChhhhcCCccc----cCCccccCCCCCccccccce-eeeeh
Confidence 00000000000 00000000000000101111 11222
Q ss_pred hhHHHHHHHHHHHH-HhhhhhhccccccccccccCCCCccccc-----cCcccccHHHHHHHhcCCCccceEeeeCceEE
Q 005227 318 LGAIAGAVTISAIV-SLLIVRAHMKNYHAISRRRHSSKTSIKI-----DGVRSFTYGEMALATNNFNSSTQIGQGGYGKV 391 (707)
Q Consensus 318 ~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~l~~~~~~~~~~~~lG~G~fg~V 391 (707)
++++++++++++++ +++++|++++ ....+... ....... .....++++++. ..|+..+.||+|+||.|
T Consensus 633 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ig~G~~g~V 706 (968)
T PLN00113 633 TCTLGAFLVLALVAFGFVFIRGRNN--LELKRVEN-EDGTWELQFFDSKVSKSITINDIL---SSLKEENVISRGKKGAS 706 (968)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhhc--cccccccc-ccccccccccccccchhhhHHHHH---hhCCcccEEccCCCeeE
Confidence 22222222222222 2222222211 11111000 0000110 011223444443 45778899999999999
Q ss_pred EEEEe-CCCcEEEEEEeccCChhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEecCCCCCHHHHHhhcCCCCc
Q 005227 392 YKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPL 470 (707)
Q Consensus 392 y~~~~-~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l 470 (707)
|+|.. .+++.||||++...... ..+|++.+++++|||||+++++|.+.+..++||||+++|+|.++++. +
T Consensus 707 y~~~~~~~~~~vavK~~~~~~~~----~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~-----l 777 (968)
T PLN00113 707 YKGKSIKNGMQFVVKEINDVNSI----PSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVLRN-----L 777 (968)
T ss_pred EEEEECCCCcEEEEEEccCCccc----cHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeCCCCCcHHHHHhc-----C
Confidence 99996 47899999998653322 23468899999999999999999999999999999999999999952 8
Q ss_pred CHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCCCccccceecccccCCCcc
Q 005227 471 GFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYL 550 (707)
Q Consensus 471 ~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ 550 (707)
+|..+..++.|+|+||+|||+.+.++|+||||||+||+++.++.+++. ||.+..... .....++..|+
T Consensus 778 ~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~-----------~~~~~~t~~y~ 845 (968)
T PLN00113 778 SWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCT-----------DTKCFISSAYV 845 (968)
T ss_pred CHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-ecccccccc-----------CCCcccccccc
Confidence 899999999999999999997766669999999999999999988876 665543211 11235789999
Q ss_pred chhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCC----chhHHHHHHHhhcccchhhccCCCC---CCChHHHHHHHH
Q 005227 551 DPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG----KNIVREVNIAYQSSMMFSVIDGNMG---SYPSECVEKFIK 623 (707)
Q Consensus 551 aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~----~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~ 623 (707)
|||++.+..++.++|||||||++|||+||+.||+.. ....+|.............+++... ..+.+...++.+
T Consensus 846 aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 925 (968)
T PLN00113 846 APETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDVSVNQNEIVEVMN 925 (968)
T ss_pred CcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccCCCCccHHHHHHHHH
Confidence 999999999999999999999999999999998532 2344444433333223333343331 244567778899
Q ss_pred HHHHhcccCCCCCCCHHHHHHHHHHhhhcCC
Q 005227 624 LALKCCQDETDARPSMSEVMRELESIWNMMP 654 (707)
Q Consensus 624 l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~ 654 (707)
++.+||+.+|++||+|.++++.|+++....+
T Consensus 926 l~~~Cl~~~P~~RPt~~evl~~L~~~~~~~~ 956 (968)
T PLN00113 926 LALHCTATDPTARPCANDVLKTLESASRSSS 956 (968)
T ss_pred HHHhhCcCCchhCcCHHHHHHHHHHhhcccc
Confidence 9999999999999999999999998766443
No 2
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.6e-52 Score=442.51 Aligned_cols=285 Identities=52% Similarity=0.882 Sum_probs=249.3
Q ss_pred CcccccHHHHHHHhcCCCccceEeeeCceEEEEEEeCCCcEEEEEEeccCChhhHHHHHHHHHHHHccCCCcceeEEEEE
Q 005227 361 GVRSFTYGEMALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYC 440 (707)
Q Consensus 361 ~~~~~~~~~l~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~ 440 (707)
....|+|+++..+|++|+..+.||+|+||.||+|.+++|+.||||++........++|.+|++++.+++|||+|+|+|||
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC 140 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYC 140 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEE
Confidence 45679999999999999999999999999999999999999999988765443145699999999999999999999999
Q ss_pred EeCC-eEEEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEee
Q 005227 441 DEEG-EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVAD 519 (707)
Q Consensus 441 ~~~~-~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~D 519 (707)
.+.+ +.+||||||++|+|.++|+.....+++|.+|++||.++|+||+|||+.+.++|||||||++|||+|+++++||+|
T Consensus 141 ~e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsD 220 (361)
T KOG1187|consen 141 LEGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSD 220 (361)
T ss_pred ecCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccC
Confidence 9998 599999999999999999875543799999999999999999999999999999999999999999999999999
Q ss_pred ecccccCCCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCC-----chhHHHHH
Q 005227 520 FGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG-----KNIVREVN 594 (707)
Q Consensus 520 FGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~-----~~~~~~~~ 594 (707)
||+|+..+... ........||.+|+|||++..+..+.|+|||||||+|+|++||+.+.+.. ..+.+|..
T Consensus 221 FGLa~~~~~~~------~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~ 294 (361)
T KOG1187|consen 221 FGLAKLGPEGD------TSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAK 294 (361)
T ss_pred ccCcccCCccc------cceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHH
Confidence 99997654210 11111117999999999999999999999999999999999999888743 23678877
Q ss_pred HHhhcccchhhccCCCC--CCCh-HHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 005227 595 IAYQSSMMFSVIDGNMG--SYPS-ECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 651 (707)
Q Consensus 595 ~~~~~~~~~~~~~~~~~--~~~~-~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~ 651 (707)
..+....+.+++|+.+. .++. +....+.+++.+|++.+|..||+|.+|+++|+.+..
T Consensus 295 ~~~~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~~ 354 (361)
T KOG1187|consen 295 PLLEEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGILS 354 (361)
T ss_pred HHHHCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhcc
Confidence 77777788999999875 4554 688889999999999999999999999999966543
No 3
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-47 Score=402.43 Aligned_cols=260 Identities=38% Similarity=0.582 Sum_probs=221.7
Q ss_pred CccceEeeeCceEEEEEEeCCCcEEEEEEeccCChhh--HHHHHHHHHHHHccCCCcceeEEEEEEeCC-eEEEEEecCC
Q 005227 378 NSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQG--EKEFLTEIQFLSRLHHRNLVSLVGYCDEEG-EQMLVYEFMS 454 (707)
Q Consensus 378 ~~~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~--~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~-~~~lV~E~~~ 454 (707)
...+.||+|+||+||+|.++....||||++....... .++|.+|+.+|++++|||||+|+|+|.... ..++|||||+
T Consensus 44 ~~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~~ 123 (362)
T KOG0192|consen 44 PIEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYMP 123 (362)
T ss_pred hhhhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeCC
Confidence 3455699999999999999765559999998644332 568999999999999999999999998887 7999999999
Q ss_pred CCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCC-cEEEeeecccccCCCCCCCC
Q 005227 455 NGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKF-TAKVADFGLSRLAPVPDIEG 533 (707)
Q Consensus 455 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~-~~kl~DFGla~~~~~~~~~~ 533 (707)
+|+|.++++......+++..++.++.|||+||.|||+++. ||||||||+|||++.++ ++||+|||+++......
T Consensus 124 ~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~--iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~--- 198 (362)
T KOG0192|consen 124 GGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGP--IIHRDLKSDNILVDLKGKTLKIADFGLSREKVISK--- 198 (362)
T ss_pred CCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCC--eeecccChhhEEEcCCCCEEEECCCccceeecccc---
Confidence 9999999988656679999999999999999999999874 99999999999999997 99999999998764321
Q ss_pred ccccceecccccCCCccchhhhc--cCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCCCC
Q 005227 534 IVPAHVSTVVKGTPGYLDPEYFL--THKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 611 (707)
Q Consensus 534 ~~~~~~~~~~~gt~~y~aPE~~~--~~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 611 (707)
...+...||+.|||||++. ...|+.|+||||||+++|||+||+.||..... ..... .-+..+.++
T Consensus 199 ----~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~-~~~~~--------~v~~~~~Rp 265 (362)
T KOG0192|consen 199 ----TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAP-VQVAS--------AVVVGGLRP 265 (362)
T ss_pred ----ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCH-HHHHH--------HHHhcCCCC
Confidence 2233467999999999999 56999999999999999999999999986655 22111 112345566
Q ss_pred CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCC
Q 005227 612 SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPE 655 (707)
Q Consensus 612 ~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~ 655 (707)
..|..++..+..++.+||+.+|..||++.+++..|+.+......
T Consensus 266 ~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~~~~~ 309 (362)
T KOG0192|consen 266 PIPKECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIMSHISS 309 (362)
T ss_pred CCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHHhhcc
Confidence 67888999999999999999999999999999999998775553
No 4
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=6.9e-49 Score=395.86 Aligned_cols=260 Identities=25% Similarity=0.422 Sum_probs=207.3
Q ss_pred HhcCCCccceEeeeCceEEEEEEe-CCCcEEEEEEeccCChh-------hHHHHHHHHHHHHccCCCcceeEEEEEEeCC
Q 005227 373 ATNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQ-------GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG 444 (707)
Q Consensus 373 ~~~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~-------~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~ 444 (707)
..+.|.+.+.||+|+||.|-+|.. ++|+.||||+++..... ....+.+|+++|++++|||||+++++|...+
T Consensus 170 ~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~d 249 (475)
T KOG0615|consen 170 FNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPD 249 (475)
T ss_pred hcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCC
Confidence 345677889999999999999995 58999999999753221 1234679999999999999999999999999
Q ss_pred eEEEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCC---CcEEEeeec
Q 005227 445 EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHK---FTAKVADFG 521 (707)
Q Consensus 445 ~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~---~~~kl~DFG 521 (707)
..|||||||+||+|.+.+-.+. .+.+..-+.+++|++.|+.|||++| |+||||||+|||+..+ ..+||+|||
T Consensus 250 s~YmVlE~v~GGeLfd~vv~nk--~l~ed~~K~~f~Qll~avkYLH~~G---I~HRDiKPeNILl~~~~e~~llKItDFG 324 (475)
T KOG0615|consen 250 SSYMVLEYVEGGELFDKVVANK--YLREDLGKLLFKQLLTAVKYLHSQG---IIHRDIKPENILLSNDAEDCLLKITDFG 324 (475)
T ss_pred ceEEEEEEecCccHHHHHHhcc--ccccchhHHHHHHHHHHHHHHHHcC---cccccCCcceEEeccCCcceEEEecccc
Confidence 9999999999999999996654 4777778999999999999999999 9999999999999765 789999999
Q ss_pred ccccCCCCCCCCccccceecccccCCCccchhhhccCCC---CCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhh
Q 005227 522 LSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKL---TDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQ 598 (707)
Q Consensus 522 la~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~---s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~ 598 (707)
+|+.... .......+||+.|.|||++.+..+ ..++|+||+||+||-+++|..||........
T Consensus 325 lAK~~g~--------~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~s------- 389 (475)
T KOG0615|consen 325 LAKVSGE--------GSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPS------- 389 (475)
T ss_pred hhhcccc--------ceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCcc-------
Confidence 9998753 345667899999999999987543 3478999999999999999999974322110
Q ss_pred cccchhh-ccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCC
Q 005227 599 SSMMFSV-IDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPS 677 (707)
Q Consensus 599 ~~~~~~~-~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~s 677 (707)
+.+. ..+.....|. .. .+.+..+.|||++||+.||++|+|
T Consensus 390 ---l~eQI~~G~y~f~p~----------------------~w--------------~~Iseea~dlI~~mL~VdP~~R~s 430 (475)
T KOG0615|consen 390 ---LKEQILKGRYAFGPL----------------------QW--------------DRISEEALDLINWMLVVDPENRPS 430 (475)
T ss_pred ---HHHHHhcCcccccCh----------------------hh--------------hhhhHHHHHHHHHhhEeCcccCcC
Confidence 1111 1111111110 00 112334558999999999999999
Q ss_pred CCcCCCCCCCCCCC
Q 005227 678 SSSMLKHPYVSSDV 691 (707)
Q Consensus 678 a~e~L~Hp~f~~~~ 691 (707)
++|||+||||....
T Consensus 431 ~~eaL~hpW~~~~~ 444 (475)
T KOG0615|consen 431 ADEALNHPWFKDAP 444 (475)
T ss_pred HHHHhcChhhhccc
Confidence 99999999998544
No 5
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=9.2e-48 Score=385.86 Aligned_cols=194 Identities=31% Similarity=0.455 Sum_probs=174.9
Q ss_pred ccceEeeeCceEEEEEEeC-CCcEEEEEEeccC-ChhhHHHHHHHHHHHHccCCCcceeEEEEEEeCC-eEEEEEecCCC
Q 005227 379 SSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEG-SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG-EQMLVYEFMSN 455 (707)
Q Consensus 379 ~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~-~~~lV~E~~~~ 455 (707)
....||+|..|+|||+.++ +++.+|+|.+... .....+++.+|+++++..+||+||.+||.|..++ ...++||||++
T Consensus 83 ~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mEYMDg 162 (364)
T KOG0581|consen 83 RLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICMEYMDG 162 (364)
T ss_pred hhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehhhcCC
Confidence 4678999999999999986 7899999999543 3344689999999999999999999999999998 59999999999
Q ss_pred CCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHh-CCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCCCc
Q 005227 456 GTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHT-EADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGI 534 (707)
Q Consensus 456 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 534 (707)
|+|++++... ..+++...-.|+.+|++||.|||+ ++ ||||||||+|||++..|++||+|||.+..+...
T Consensus 163 GSLd~~~k~~--g~i~E~~L~~ia~~VL~GL~YLh~~~~---IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS----- 232 (364)
T KOG0581|consen 163 GSLDDILKRV--GRIPEPVLGKIARAVLRGLSYLHEERK---IIHRDIKPSNLLVNSKGEVKICDFGVSGILVNS----- 232 (364)
T ss_pred CCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHhhccC---eeeccCCHHHeeeccCCCEEeccccccHHhhhh-----
Confidence 9999999765 459999999999999999999996 66 999999999999999999999999999876432
Q ss_pred cccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCC
Q 005227 535 VPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 586 (707)
Q Consensus 535 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~ 586 (707)
......||..|||||.+.+..|+.++||||||++++|+.+|+.||...
T Consensus 233 ----~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~ 280 (364)
T KOG0581|consen 233 ----IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPP 280 (364)
T ss_pred ----hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCc
Confidence 345678999999999999999999999999999999999999999753
No 6
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=6.4e-48 Score=404.67 Aligned_cols=263 Identities=30% Similarity=0.505 Sum_probs=224.6
Q ss_pred HHHHHhcCCCccceEeeeCceEEEEEEeCCCcEEEEEEeccCChhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEE
Q 005227 369 EMALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 448 (707)
Q Consensus 369 ~l~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~l 448 (707)
.++.....+...+.||+|.||.||.|.++....||+|.++.... ..+.|.+|+++|++++|+|||+++++|..++.++|
T Consensus 200 ~wei~r~~l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~m-~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyI 278 (468)
T KOG0197|consen 200 PWEIPREELKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEGSM-SPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYI 278 (468)
T ss_pred CeeecHHHHHHHHHhcCCccceEEEEEEcCCCcccceEEecccc-ChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEE
Confidence 33334444455788999999999999998778999999987543 34689999999999999999999999999889999
Q ss_pred EEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCC
Q 005227 449 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 528 (707)
Q Consensus 449 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~ 528 (707)
|||||+.|+|.++|+...+..+...+.+.++.|||+||+||++++ +|||||.++||||+++..+||+|||+|+....
T Consensus 279 VtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~---~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d 355 (468)
T KOG0197|consen 279 VTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKN---YIHRDLAARNILVDEDLVVKISDFGLARLIGD 355 (468)
T ss_pred EEEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCC---ccchhhhhhheeeccCceEEEcccccccccCC
Confidence 999999999999999867778999999999999999999999999 99999999999999999999999999995443
Q ss_pred CCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHhhcccchhhcc
Q 005227 529 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVID 607 (707)
Q Consensus 529 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 607 (707)
..+. ......-+..|.|||.+..+.++.|||||||||+||||+| |+.||....+. +.+..+-.
T Consensus 356 ~~Y~------~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~----------ev~~~le~ 419 (468)
T KOG0197|consen 356 DEYT------ASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNE----------EVLELLER 419 (468)
T ss_pred Ccee------ecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHH----------HHHHHHhc
Confidence 3221 1222234678999999999999999999999999999999 99998765441 12233445
Q ss_pred CCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 005227 608 GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 651 (707)
Q Consensus 608 ~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~ 651 (707)
+.+.+.|+.|+..++++|..||+.+|++|||+..+...++.+..
T Consensus 420 GyRlp~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~~ 463 (468)
T KOG0197|consen 420 GYRLPRPEGCPDEVYELMKSCWHEDPEDRPTFETLREVLEDFFT 463 (468)
T ss_pred cCcCCCCCCCCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhhh
Confidence 66777899999999999999999999999999999888887654
No 7
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=4.2e-48 Score=369.64 Aligned_cols=277 Identities=27% Similarity=0.465 Sum_probs=223.1
Q ss_pred cCCCccceEeeeCceEEEEEEe-CCCcEEEEEEeccCChhh--HHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEe
Q 005227 375 NNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQG--EKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 451 (707)
Q Consensus 375 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~--~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E 451 (707)
.+|...+++|+|.||.||+|++ ++|+.||||+++.....+ .....+|++.|+.++|+||+.++++|.+.+...||+|
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfE 81 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFE 81 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEE
Confidence 4688899999999999999995 589999999998654332 4578999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCC
Q 005227 452 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 531 (707)
Q Consensus 452 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 531 (707)
||+. +|...++.+ ...++...++.++.++++|++|||++. |+||||||.|+|++++|.+||+|||+|+.+..++
T Consensus 82 fm~t-dLe~vIkd~-~i~l~pa~iK~y~~m~LkGl~y~H~~~---IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~- 155 (318)
T KOG0659|consen 82 FMPT-DLEVVIKDK-NIILSPADIKSYMLMTLKGLAYCHSKW---ILHRDLKPNNLLISSDGQLKIADFGLARFFGSPN- 155 (318)
T ss_pred eccc-cHHHHhccc-ccccCHHHHHHHHHHHHHHHHHHHhhh---hhcccCCccceEEcCCCcEEeecccchhccCCCC-
Confidence 9965 999999765 456899999999999999999999999 9999999999999999999999999999887654
Q ss_pred CCccccceecccccCCCccchhhhcc-CCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCCC
Q 005227 532 EGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 610 (707)
Q Consensus 532 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 610 (707)
......+-|..|+|||.+.| ..|+...||||.||++.||+.| .||..+....+++..++.. +
T Consensus 156 ------~~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr-~P~fpG~sDidQL~~If~~----------L 218 (318)
T KOG0659|consen 156 ------RIQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLR-VPFFPGDSDIDQLSKIFRA----------L 218 (318)
T ss_pred ------cccccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHcc-CCCCCCCchHHHHHHHHHH----------c
Confidence 22333467899999999988 6799999999999999999998 5666666666666554432 1
Q ss_pred CCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH-------hhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCCC
Q 005227 611 GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELES-------IWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLK 683 (707)
Q Consensus 611 ~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~-------~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~ 683 (707)
+. +.|++-|.|.++-+..+- ....++....+..||+.+|+++||.+|+||+|+|+
T Consensus 219 GT------------------P~~~~WP~~~~lpdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~ 280 (318)
T KOG0659|consen 219 GT------------------PTPDQWPEMTSLPDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALK 280 (318)
T ss_pred CC------------------CCcccCccccccccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhc
Confidence 11 112222222222111110 01145666677799999999999999999999999
Q ss_pred CCCCCCCCC
Q 005227 684 HPYVSSDVS 692 (707)
Q Consensus 684 Hp~f~~~~~ 692 (707)
||||++...
T Consensus 281 ~~yf~~~P~ 289 (318)
T KOG0659|consen 281 HPYFKSLPL 289 (318)
T ss_pred chhhhcCCC
Confidence 999997444
No 8
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3e-47 Score=403.06 Aligned_cols=256 Identities=25% Similarity=0.440 Sum_probs=217.2
Q ss_pred cCCCccceEeeeCceEEEEEEe-CCCcEEEEEEeccCCh---hhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEE
Q 005227 375 NNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 450 (707)
Q Consensus 375 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~ 450 (707)
.+|...+.||+|||+.||.++. .+|+.||+|++..... ...+.+.+|+++.++|+|||||+++++|++.+..|||.
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL 97 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL 97 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence 5688899999999999999996 7899999999986433 33567899999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCC
Q 005227 451 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 530 (707)
Q Consensus 451 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~ 530 (707)
|+|++++|..+++ .+.++++.+++.+..||+.||.|||+.+ |+|||||..|+|+++++++||+|||+|..+..+
T Consensus 98 ELC~~~sL~el~K--rrk~ltEpEary~l~QIv~GlkYLH~~~---IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~- 171 (592)
T KOG0575|consen 98 ELCHRGSLMELLK--RRKPLTEPEARYFLRQIVEGLKYLHSLG---IIHRDLKLGNLFLNENMNVKIGDFGLATQLEYD- 171 (592)
T ss_pred EecCCccHHHHHH--hcCCCCcHHHHHHHHHHHHHHHHHHhcC---ceecccchhheeecCcCcEEecccceeeeecCc-
Confidence 9999999999996 4567999999999999999999999999 999999999999999999999999999987643
Q ss_pred CCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCCC
Q 005227 531 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 610 (707)
Q Consensus 531 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 610 (707)
.....+.+||+.|+|||++....++..+||||+||+||-|+.|++||....-
T Consensus 172 ------~Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~v---------------------- 223 (592)
T KOG0575|consen 172 ------GERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTV---------------------- 223 (592)
T ss_pred ------ccccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchH----------------------
Confidence 2456678999999999999999999999999999999999999999963211
Q ss_pred CCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCCCCCCC-CC
Q 005227 611 GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYV-SS 689 (707)
Q Consensus 611 ~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f-~~ 689 (707)
.+.+ .|+..+--..|+ ..+..+.|||.+||+.||.+|||++++|.|+|| ++
T Consensus 224 --------kety----~~Ik~~~Y~~P~----------------~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h~Ff~~g 275 (592)
T KOG0575|consen 224 --------KETY----NKIKLNEYSMPS----------------HLSAEAKDLIRKLLRPNPSERPSLDEVLDHPFFKSG 275 (592)
T ss_pred --------HHHH----HHHHhcCccccc----------------ccCHHHHHHHHHHhcCCcccCCCHHHHhcCHhhhCC
Confidence 1111 111111112222 234556789999999999999999999999999 44
Q ss_pred CCC
Q 005227 690 DVS 692 (707)
Q Consensus 690 ~~~ 692 (707)
.+.
T Consensus 276 ~~p 278 (592)
T KOG0575|consen 276 FTP 278 (592)
T ss_pred CcC
Confidence 443
No 9
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-47 Score=393.57 Aligned_cols=287 Identities=22% Similarity=0.349 Sum_probs=228.4
Q ss_pred hcCCCccceEeeeCceEEEEEE-eCCCcEEEEEEeccCChhh-HHHHHHHHHHHHccC-CCcceeEEEEEEeCC-eEEEE
Q 005227 374 TNNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQG-EKEFLTEIQFLSRLH-HRNLVSLVGYCDEEG-EQMLV 449 (707)
Q Consensus 374 ~~~~~~~~~lG~G~fg~Vy~~~-~~~~~~vavK~l~~~~~~~-~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~-~~~lV 449 (707)
.++|...++||.|+||.||+|+ ..+|..||||+++..-... +-.=.+|++.|+++. ||||+++.+++.+.+ .+++|
T Consensus 9 m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~fV 88 (538)
T KOG0661|consen 9 MDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYFV 88 (538)
T ss_pred HHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEeee
Confidence 4688899999999999999999 4579999999998643322 334578999999998 999999999998887 99999
Q ss_pred EecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCC
Q 005227 450 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 529 (707)
Q Consensus 450 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~ 529 (707)
||||+ .+|+++++++ +..+++..++.|+.||++||+|+|.+| +.|||+||+|||+.....+||+|||+||....
T Consensus 89 fE~Md-~NLYqLmK~R-~r~fse~~irnim~QilqGL~hiHk~G---fFHRDlKPENiLi~~~~~iKiaDFGLARev~S- 162 (538)
T KOG0661|consen 89 FEFMD-CNLYQLMKDR-NRLFSESDIRNIMYQILQGLAHIHKHG---FFHRDLKPENILISGNDVIKIADFGLAREVRS- 162 (538)
T ss_pred HHhhh-hhHHHHHhhc-CCcCCHHHHHHHHHHHHHHHHHHHhcC---cccccCChhheEecccceeEeccccccccccc-
Confidence 99994 6999999887 778999999999999999999999999 99999999999999999999999999997643
Q ss_pred CCCCccccceecccccCCCccchhhhcc-CCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccC
Q 005227 530 DIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDG 608 (707)
Q Consensus 530 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 608 (707)
....+..+.|..|+|||++.. +-|+.+.||||+|||++|+.+-++.|... +..++...+.. +
T Consensus 163 -------kpPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~-sE~Dqi~KIc~------V--- 225 (538)
T KOG0661|consen 163 -------KPPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGA-SEIDQIYKICE------V--- 225 (538)
T ss_pred -------CCCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCC-cHHHHHHHHHH------H---
Confidence 334566788999999999865 78999999999999999999987777544 44444333221 1
Q ss_pred CCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCCCCCCCC
Q 005227 609 NMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVS 688 (707)
Q Consensus 609 ~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f~ 688 (707)
++....+.+.+-.+++..+=-.-|..-|+- +...++....++.++|.+|+.|||++||||+|+|+||||.
T Consensus 226 -LGtP~~~~~~eg~~La~~mnf~~P~~~~~~---------l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~pffq 295 (538)
T KOG0661|consen 226 -LGTPDKDSWPEGYNLASAMNFRFPQVKPSP---------LKDLLPNASSEAASLIERLLAWDPDKRPTASQALQHPFFQ 295 (538)
T ss_pred -hCCCccccchhHHHHHHHhccCCCcCCCCC---------hHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcCcccc
Confidence 112222223333555555444444444432 2223455667778899999999999999999999999997
Q ss_pred CCCCC
Q 005227 689 SDVSG 693 (707)
Q Consensus 689 ~~~~~ 693 (707)
...+.
T Consensus 296 ~~~~~ 300 (538)
T KOG0661|consen 296 VGRAS 300 (538)
T ss_pred ccccc
Confidence 66553
No 10
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-46 Score=377.79 Aligned_cols=268 Identities=25% Similarity=0.406 Sum_probs=212.3
Q ss_pred hcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccC--ChhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEE
Q 005227 374 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEG--SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 450 (707)
Q Consensus 374 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~ 450 (707)
..+|...+.||+|+||+||+|+++ ++..||||.+... .....+.+..|+++|+.++|||||++++++..++..||||
T Consensus 9 ~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVM 88 (429)
T KOG0595|consen 9 VGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVM 88 (429)
T ss_pred cccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEE
Confidence 457888889999999999999975 6899999998776 4445567889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCC------CcEEEeeecccc
Q 005227 451 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHK------FTAKVADFGLSR 524 (707)
Q Consensus 451 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~------~~~kl~DFGla~ 524 (707)
|||.||+|.++++.++ .+++..++.++.|+|.||++||+++ ||||||||.|||++.. -.+||+|||+|+
T Consensus 89 EyC~gGDLs~yi~~~~--~l~e~t~r~Fm~QLA~alq~L~~~~---IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR 163 (429)
T KOG0595|consen 89 EYCNGGDLSDYIRRRG--RLPEATARHFMQQLASALQFLHENN---IIHRDLKPQNILLSTTARNDTSPVLKIADFGFAR 163 (429)
T ss_pred EeCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCCcceEEeccCCCCCCCceEEecccchhh
Confidence 9999999999997765 5999999999999999999999999 9999999999999764 568999999999
Q ss_pred cCCCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchh
Q 005227 525 LAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFS 604 (707)
Q Consensus 525 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~ 604 (707)
.+.. .......+|++-|||||+++.+.|+.|+|+||+|+++|+|++|+.||...... +........
T Consensus 164 ~L~~--------~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~-eL~~~~~k~----- 229 (429)
T KOG0595|consen 164 FLQP--------GSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETPK-ELLLYIKKG----- 229 (429)
T ss_pred hCCc--------hhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCHH-HHHHHHhcc-----
Confidence 8864 33456789999999999999999999999999999999999999999744321 111111000
Q ss_pred hccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCC
Q 005227 605 VIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSML 682 (707)
Q Consensus 605 ~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L 682 (707)
.......+........++...-++.++.+|-++.+ .|...++..+|.+|..+.++=
T Consensus 230 --~~~~~~~~~~~s~~~~~Ll~~ll~~~~~~~~~~~~--------------------~~~~~~l~~~p~~~~~~~~~~ 285 (429)
T KOG0595|consen 230 --NEIVPVLPAELSNPLRELLISLLQRNPKDRISFED--------------------FFDHPFLAANPQDRADAFELE 285 (429)
T ss_pred --ccccCchhhhccCchhhhhhHHHhcCccccCchHH--------------------hhhhhhcccCcccccCccccc
Confidence 01112233444445556666666666666655433 345556666676666655443
No 11
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=6.3e-47 Score=379.83 Aligned_cols=272 Identities=23% Similarity=0.358 Sum_probs=222.9
Q ss_pred HhcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCChhh---HHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEE
Q 005227 373 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQG---EKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 448 (707)
Q Consensus 373 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~---~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~l 448 (707)
..++|++.++||+|+||+||.++.+ +++.+|+|++++..... .+...+|..+|.+++||.||+++..|++.+..|+
T Consensus 23 ~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLyl 102 (357)
T KOG0598|consen 23 GPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYL 102 (357)
T ss_pred ChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEE
Confidence 4568999999999999999999964 68999999998754332 4567899999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCC
Q 005227 449 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 528 (707)
Q Consensus 449 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~ 528 (707)
|+||+.||.|..+|++++ .+++..++.++..|+.||.|||+.+ ||||||||+|||+|.+|+++|+|||+++....
T Consensus 103 Vld~~~GGeLf~hL~~eg--~F~E~~arfYlaEi~lAL~~LH~~g---IiyRDlKPENILLd~~GHi~LtDFgL~k~~~~ 177 (357)
T KOG0598|consen 103 VLDYLNGGELFYHLQREG--RFSEDRARFYLAEIVLALGYLHSKG---IIYRDLKPENILLDEQGHIKLTDFGLCKEDLK 177 (357)
T ss_pred EEeccCCccHHHHHHhcC--CcchhHHHHHHHHHHHHHHHHHhCC---eeeccCCHHHeeecCCCcEEEeccccchhccc
Confidence 999999999999997654 4999999999999999999999999 99999999999999999999999999985432
Q ss_pred CCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccC
Q 005227 529 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDG 608 (707)
Q Consensus 529 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 608 (707)
. .......+||+.|||||++.+..|+..+|+||+|+++|||++|.+||...+. ...
T Consensus 178 ~-------~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~-~~~---------------- 233 (357)
T KOG0598|consen 178 D-------GDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDV-KKM---------------- 233 (357)
T ss_pred C-------CCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccH-HHH----------------
Confidence 2 2344558999999999999999999999999999999999999999964332 111
Q ss_pred CCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCC-CCCCCCccccCCCCCCCCCCC----CCCcCCC
Q 005227 609 NMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPE-SDTKTPEFINSEHTSKEETPP----SSSSMLK 683 (707)
Q Consensus 609 ~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~-~~~~~~dll~~~L~~dP~~R~----sa~e~L~ 683 (707)
.+-+..+- + ...+. .+..+.|+++++|+.||++|+ .++++-+
T Consensus 234 -------------~~~I~~~k------~--------------~~~p~~ls~~ardll~~LL~rdp~~RLg~~~d~~~ik~ 280 (357)
T KOG0598|consen 234 -------------YDKILKGK------L--------------PLPPGYLSEEARDLLKKLLKRDPRQRLGGPGDAEEIKR 280 (357)
T ss_pred -------------HHHHhcCc------C--------------CCCCccCCHHHHHHHHHHhccCHHHhcCCCCChHHhhc
Confidence 11111110 0 11122 345566899999999999996 6778889
Q ss_pred CCCCCCCCCCCCcccccCcccCC
Q 005227 684 HPYVSSDVSGSNLVSGVIPTITP 706 (707)
Q Consensus 684 Hp~f~~~~~~~~~~~~~~~~~~~ 706 (707)
||||.+..+..-.-..+.|++.|
T Consensus 281 HpfF~~inW~~l~~k~l~PpF~P 303 (357)
T KOG0598|consen 281 HPFFKGINWEKLLAKKLSPPFKP 303 (357)
T ss_pred CcccccCCHHHHHhcCCCCCeec
Confidence 99999988855444456666654
No 12
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=7.9e-47 Score=390.04 Aligned_cols=287 Identities=26% Similarity=0.393 Sum_probs=221.1
Q ss_pred hcCCCccceEeeeCceEEEEEE-eCCCcEEEEEEeccCC--hhhHHHHHHHHHHHHccCCCcceeEEEEEEeC--CeEEE
Q 005227 374 TNNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE--GEQML 448 (707)
Q Consensus 374 ~~~~~~~~~lG~G~fg~Vy~~~-~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~--~~~~l 448 (707)
.+.|+.+++||+|+||.||+|+ ..+|+.||+|++.... .....-..+||.+|++++||||++|.+...+. +.+||
T Consensus 116 ~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYl 195 (560)
T KOG0600|consen 116 ADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYL 195 (560)
T ss_pred hHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEE
Confidence 3457778999999999999999 4689999999987654 33345678999999999999999999998776 68999
Q ss_pred EEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCC
Q 005227 449 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 528 (707)
Q Consensus 449 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~ 528 (707)
|+|||++ +|.-++... .-.|++.+++.++.|++.||+|+|.++ |+|||||.+|||||.+|.+||+|||+|+++..
T Consensus 196 VFeYMdh-DL~GLl~~p-~vkft~~qIKc~mkQLl~Gl~~cH~~g---vlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~ 270 (560)
T KOG0600|consen 196 VFEYMDH-DLSGLLSSP-GVKFTEPQIKCYMKQLLEGLEYCHSRG---VLHRDIKGSNILIDNNGVLKIADFGLARFYTP 270 (560)
T ss_pred EEecccc-hhhhhhcCC-CcccChHHHHHHHHHHHHHHHHHhhcC---eeeccccccceEEcCCCCEEeccccceeeccC
Confidence 9999976 888888543 346999999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCCccccceecccccCCCccchhhhcc-CCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhcc
Q 005227 529 PDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVID 607 (707)
Q Consensus 529 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 607 (707)
.. ....+..+-|..|+|||++.| ..|+.++|+||.||||.||++|++.|. +....+++..++..
T Consensus 271 ~~------~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~-G~tEveQl~kIfkl-------- 335 (560)
T KOG0600|consen 271 SG------SAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQ-GRTEVEQLHKIFKL-------- 335 (560)
T ss_pred CC------CcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcC-CccHHHHHHHHHHH--------
Confidence 43 233566678999999999998 579999999999999999999977765 44445555444322
Q ss_pred CCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCCCCCCC
Q 005227 608 GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYV 687 (707)
Q Consensus 608 ~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f 687 (707)
.+...++++. ..++- .+....|. + +.. +.+.+ .+...+...++|+..||..||++|.||.+||+|+||
T Consensus 336 --cGSP~e~~W~-~~kLP-~~~~~kp~-~-~y~---r~l~E---~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~seyF 403 (560)
T KOG0600|consen 336 --CGSPTEDYWP-VSKLP-HATIFKPQ-Q-PYK---RRLRE---TFKDFPASALDLLEKLLSLDPDKRGTASSALQSEYF 403 (560)
T ss_pred --hCCCChhccc-cccCC-cccccCCC-C-ccc---chHHH---HhccCCHHHHHHHHHHhccCccccccHHHHhcCccc
Confidence 2222233333 11111 11111111 1 111 11222 234445667899999999999999999999999999
Q ss_pred CCCCC
Q 005227 688 SSDVS 692 (707)
Q Consensus 688 ~~~~~ 692 (707)
.....
T Consensus 404 ~t~p~ 408 (560)
T KOG0600|consen 404 TTEPL 408 (560)
T ss_pred ccCCC
Confidence 55444
No 13
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=2.4e-47 Score=370.09 Aligned_cols=282 Identities=23% Similarity=0.365 Sum_probs=219.1
Q ss_pred cCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCCh--hhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEe
Q 005227 375 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 451 (707)
Q Consensus 375 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E 451 (707)
+.|+...++|+|+||+||+++.+ +|+.||||++..... .-.+-.++|+++|++++|+|+|.++++|......+||+|
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE 81 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFE 81 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEee
Confidence 46888899999999999999976 699999999976433 224667899999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCC
Q 005227 452 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 531 (707)
Q Consensus 452 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 531 (707)
||+. ++.+-|.+. ...++...+.++++|+++|+.|+|+++ +|||||||+|||++.++.+|+||||+|+.+..+
T Consensus 82 ~~dh-TvL~eLe~~-p~G~~~~~vk~~l~Q~l~ai~~cHk~n---~IHRDIKPENILit~~gvvKLCDFGFAR~L~~p-- 154 (396)
T KOG0593|consen 82 YCDH-TVLHELERY-PNGVPSELVKKYLYQLLKAIHFCHKNN---CIHRDIKPENILITQNGVVKLCDFGFARTLSAP-- 154 (396)
T ss_pred ecch-HHHHHHHhc-cCCCCHHHHHHHHHHHHHHhhhhhhcC---eecccCChhheEEecCCcEEeccchhhHhhcCC--
Confidence 9976 555555543 345899999999999999999999999 999999999999999999999999999987642
Q ss_pred CCccccceecccccCCCccchhhhcc-CCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCCC
Q 005227 532 EGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 610 (707)
Q Consensus 532 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 610 (707)
....+..+.|..|+|||.+.+ .+|...+||||+||++.||++|.+.|.. ....+++..+... +
T Consensus 155 -----gd~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG-~SDiDQLy~I~kt----------L 218 (396)
T KOG0593|consen 155 -----GDNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPG-RSDIDQLYLIRKT----------L 218 (396)
T ss_pred -----cchhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCC-cchHHHHHHHHHH----------H
Confidence 334566778999999999998 7899999999999999999999766654 4444443332111 1
Q ss_pred CCCChHHHHHHHHHHHHhcccCCC----CCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCCCCCC
Q 005227 611 GSYPSECVEKFIKLALKCCQDETD----ARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPY 686 (707)
Q Consensus 611 ~~~~~~~~~~l~~l~~~c~~~~p~----~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hp~ 686 (707)
+..... ..++ +..+|- .=|.. +.++.+...+|.......||+.+||.+||++|++.+|+|.|||
T Consensus 219 G~L~pr----hq~i----F~~N~~F~Gv~lP~~----~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H~y 286 (396)
T KOG0593|consen 219 GNLIPR----HQSI----FSSNPFFHGVRLPEP----EHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLHHPY 286 (396)
T ss_pred cccCHH----HHHH----hccCCceeeeecCCC----CCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhcChH
Confidence 111111 1111 111110 00100 1223344566777777889999999999999999999999999
Q ss_pred CCCCC
Q 005227 687 VSSDV 691 (707)
Q Consensus 687 f~~~~ 691 (707)
|++-+
T Consensus 287 Fd~~~ 291 (396)
T KOG0593|consen 287 FDGFI 291 (396)
T ss_pred HHHHH
Confidence 96543
No 14
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.5e-45 Score=404.59 Aligned_cols=264 Identities=30% Similarity=0.507 Sum_probs=225.8
Q ss_pred HhcCCCccceEeeeCceEEEEEEeC------CCcEEEEEEeccCChh-hHHHHHHHHHHHHccCCCcceeEEEEEEeCCe
Q 005227 373 ATNNFNSSTQIGQGGYGKVYKGILP------DGTVVAVKRAQEGSLQ-GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGE 445 (707)
Q Consensus 373 ~~~~~~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~l~~~~~~-~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~ 445 (707)
...+....+.||+|+||+||+|... +...||||.+++.... ..++|++|++++..++|||||+|+|+|.+++.
T Consensus 484 ~r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P 563 (774)
T KOG1026|consen 484 PRSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDP 563 (774)
T ss_pred chhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCe
Confidence 3444555789999999999999852 3568999999987665 57899999999999999999999999999999
Q ss_pred EEEEEecCCCCCHHHHHhhcC------------CCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCC
Q 005227 446 QMLVYEFMSNGTLRDQLSAKS------------KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKF 513 (707)
Q Consensus 446 ~~lV~E~~~~gsL~~~l~~~~------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~ 513 (707)
.++|+|||..|||.++|.... +.+++..+.+.||.|||.||+||-++. +|||||..+|+||.++.
T Consensus 564 ~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~---FVHRDLATRNCLVge~l 640 (774)
T KOG1026|consen 564 LCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHH---FVHRDLATRNCLVGENL 640 (774)
T ss_pred eEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCc---ccccchhhhhceeccce
Confidence 999999999999999997521 234899999999999999999999999 99999999999999999
Q ss_pred cEEEeeecccccCCCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc-CCCCCCCCchhHHH
Q 005227 514 TAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVRE 592 (707)
Q Consensus 514 ~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~ellt-G~~pf~~~~~~~~~ 592 (707)
.|||+|||+++.....|++... ....-+++|||||.++.++||.+||||||||+|||+++ |+.||..-.+.
T Consensus 641 ~VKIsDfGLsRdiYssDYYk~~-----~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~--- 712 (774)
T KOG1026|consen 641 VVKISDFGLSRDIYSSDYYKVR-----GNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQ--- 712 (774)
T ss_pred EEEecccccchhhhhhhhhccc-----CCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchH---
Confidence 9999999999987666544321 12223679999999999999999999999999999999 99999765441
Q ss_pred HHHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCC
Q 005227 593 VNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMP 654 (707)
Q Consensus 593 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~ 654 (707)
+.+..+-++...+.|+.|+.+++++|..||+..|.+||++.|+-..|+......+
T Consensus 713 -------EVIe~i~~g~lL~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~~s~ 767 (774)
T KOG1026|consen 713 -------EVIECIRAGQLLSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQASP 767 (774)
T ss_pred -------HHHHHHHcCCcccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHhcCc
Confidence 1223344556677899999999999999999999999999999999998766544
No 15
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=2.4e-45 Score=360.80 Aligned_cols=286 Identities=24% Similarity=0.327 Sum_probs=216.5
Q ss_pred cCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCChhh--HHHHHHHHHHHHccCCCcceeEEEEEE--eCCeEEEE
Q 005227 375 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQG--EKEFLTEIQFLSRLHHRNLVSLVGYCD--EEGEQMLV 449 (707)
Q Consensus 375 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~--~~~~~~E~~~l~~l~h~nIv~l~~~~~--~~~~~~lV 449 (707)
+.|+..+.|++|+||.||+|+.+ +++.||+|+++-..... .-...+|+.+|.+++|||||.+..+.. +-+.+|+|
T Consensus 76 ~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~V 155 (419)
T KOG0663|consen 76 EEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYIV 155 (419)
T ss_pred HHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeeee
Confidence 45777899999999999999965 78999999997543211 235689999999999999999998874 34579999
Q ss_pred EecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCC
Q 005227 450 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 529 (707)
Q Consensus 450 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~ 529 (707)
||||+. +|..+++... +++...+++.+..|+++|++|||... |+|||||++|+|++..|.+||+|||+|+.+..+
T Consensus 156 Me~~Eh-DLksl~d~m~-q~F~~~evK~L~~QlL~glk~lH~~w---ilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp 230 (419)
T KOG0663|consen 156 MEYVEH-DLKSLMETMK-QPFLPGEVKTLMLQLLRGLKHLHDNW---ILHRDLKTSNLLLSHKGILKIADFGLAREYGSP 230 (419)
T ss_pred HHHHHh-hHHHHHHhcc-CCCchHHHHHHHHHHHHHHHHHhhce---eEecccchhheeeccCCcEEecccchhhhhcCC
Confidence 999976 9999998764 67999999999999999999999999 999999999999999999999999999987653
Q ss_pred CCCCccccceecccccCCCccchhhhcc-CCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccC
Q 005227 530 DIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDG 608 (707)
Q Consensus 530 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 608 (707)
....+..+-|..|+|||++.+ ..|+.+.||||+|||+.||+++++.|. +....+++..++..-.
T Consensus 231 -------~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~-G~sE~dQl~~If~llG------- 295 (419)
T KOG0663|consen 231 -------LKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFP-GKSEIDQLDKIFKLLG------- 295 (419)
T ss_pred -------cccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCC-CCchHHHHHHHHHHhC-------
Confidence 233556678999999999988 679999999999999999999977765 4444555555443211
Q ss_pred CCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCC--CCCCCCccccCCCCCCCCCCCCCCcCCCCCC
Q 005227 609 NMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPE--SDTKTPEFINSEHTSKEETPPSSSSMLKHPY 686 (707)
Q Consensus 609 ~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~--~~~~~~dll~~~L~~dP~~R~sa~e~L~Hp~ 686 (707)
...+..+..+.++-. ++ --.+|.. -...|+ ..++. ......||++.+|++||.+|+||+|+|+|+|
T Consensus 296 ---tPte~iwpg~~~lp~--~k--~~~f~~~--pyn~lr---~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h~~ 363 (419)
T KOG0663|consen 296 ---TPSEAIWPGYSELPA--VK--KMTFSEH--PYNNLR---KKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKHEY 363 (419)
T ss_pred ---CCccccCCCccccch--hh--ccccCCC--Cchhhh---hhccccccchhHHHHHHHHhccCccccccHHHhhcccc
Confidence 111111111111100 00 0001100 011222 22333 2366789999999999999999999999999
Q ss_pred CCCCCC
Q 005227 687 VSSDVS 692 (707)
Q Consensus 687 f~~~~~ 692 (707)
|.....
T Consensus 364 F~e~P~ 369 (419)
T KOG0663|consen 364 FRETPL 369 (419)
T ss_pred cccCCC
Confidence 987443
No 16
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.5e-46 Score=358.51 Aligned_cols=257 Identities=27% Similarity=0.443 Sum_probs=214.3
Q ss_pred cCCCccceEeeeCceEEEEEE-eCCCcEEEEEEeccCChh--hHHHHHHHHHHHHccCCCcceeEEE-EEEeCCe-EEEE
Q 005227 375 NNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQ--GEKEFLTEIQFLSRLHHRNLVSLVG-YCDEEGE-QMLV 449 (707)
Q Consensus 375 ~~~~~~~~lG~G~fg~Vy~~~-~~~~~~vavK~l~~~~~~--~~~~~~~E~~~l~~l~h~nIv~l~~-~~~~~~~-~~lV 449 (707)
.+|.+.++||+|.||+||++. ..+|..||.|.++..... ..+....|+.+|++++|||||++++ .+.++.+ .+||
T Consensus 19 ~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlniv 98 (375)
T KOG0591|consen 19 ADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIV 98 (375)
T ss_pred HHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHH
Confidence 357788999999999999999 569999999998854333 3457889999999999999999999 5555555 8999
Q ss_pred EecCCCCCHHHHHhh--cCCCCcCHHHHHHHHHHHHHHHHHHHhCC-CCCeEecCCCCCCEEEcCCCcEEEeeecccccC
Q 005227 450 YEFMSNGTLRDQLSA--KSKEPLGFAMRLSIALGSSRGILYLHTEA-DPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 526 (707)
Q Consensus 450 ~E~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~ia~gL~yLH~~~-~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~ 526 (707)
||||..|+|..+++. +.+..+++..+|+++.|++.||.++|+.- ...|+||||||.||+++.+|.+|++|||+++.+
T Consensus 99 mE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l 178 (375)
T KOG0591|consen 99 MELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFL 178 (375)
T ss_pred HHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhHh
Confidence 999999999999975 45567999999999999999999999832 123999999999999999999999999999987
Q ss_pred CCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhc
Q 005227 527 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVI 606 (707)
Q Consensus 527 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~ 606 (707)
... .......+|||.||+||.+.+.+|+.+|||||+||++|||+.-++||... +....- ..+.
T Consensus 179 ~s~-------~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~-n~~~L~---------~KI~ 241 (375)
T KOG0591|consen 179 SSK-------TTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGD-NLLSLC---------KKIE 241 (375)
T ss_pred cch-------hHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccc-cHHHHH---------HHHH
Confidence 642 23345678999999999999999999999999999999999999999755 322211 2233
Q ss_pred cCCCCCCC-hHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 005227 607 DGNMGSYP-SECVEKFIKLALKCCQDETDARPSMSEVMRELES 648 (707)
Q Consensus 607 ~~~~~~~~-~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~ 648 (707)
.+..++.| +.++..+.+++..|+..|++.||+...+++.+..
T Consensus 242 qgd~~~~p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di~~ 284 (375)
T KOG0591|consen 242 QGDYPPLPDEHYSTDLRELINMCIAVDPEQRPDTVPYVQDIQS 284 (375)
T ss_pred cCCCCCCcHHHhhhHHHHHHHHHccCCcccCCCcchHHHHHHH
Confidence 44556666 7789999999999999999999987666655544
No 17
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=6.8e-45 Score=352.61 Aligned_cols=266 Identities=21% Similarity=0.318 Sum_probs=216.9
Q ss_pred cCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCChhhHH---HHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEE
Q 005227 375 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEK---EFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 450 (707)
Q Consensus 375 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~---~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~ 450 (707)
++|+..+.||.|+||.|.+++.+ +|..+|+|++........+ ...+|..+|+.+.||.++++++.|.+.+..+|||
T Consensus 44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvm 123 (355)
T KOG0616|consen 44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVM 123 (355)
T ss_pred hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEE
Confidence 46778999999999999999975 7899999999876554443 4578999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCC
Q 005227 451 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 530 (707)
Q Consensus 451 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~ 530 (707)
||++||.|.+++++.+ .+++..++.+|.+|+.||+|||+.+ |++|||||+|||+|.+|.+||+|||.|+...
T Consensus 124 eyv~GGElFS~Lrk~~--rF~e~~arFYAAeivlAleylH~~~---iiYRDLKPENiLlD~~G~iKitDFGFAK~v~--- 195 (355)
T KOG0616|consen 124 EYVPGGELFSYLRKSG--RFSEPHARFYAAEIVLALEYLHSLD---IIYRDLKPENLLLDQNGHIKITDFGFAKRVS--- 195 (355)
T ss_pred eccCCccHHHHHHhcC--CCCchhHHHHHHHHHHHHHHHHhcC---eeeccCChHHeeeccCCcEEEEeccceEEec---
Confidence 9999999999997644 5999999999999999999999999 9999999999999999999999999998763
Q ss_pred CCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCCC
Q 005227 531 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 610 (707)
Q Consensus 531 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 610 (707)
....+.+||+.|+|||++....+..++|.|||||++|||+.|.+||...... .
T Consensus 196 -------~rT~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~-~------------------- 248 (355)
T KOG0616|consen 196 -------GRTWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPI-Q------------------- 248 (355)
T ss_pred -------CcEEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChH-H-------------------
Confidence 3366789999999999999999999999999999999999999999754431 1
Q ss_pred CCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCC-----CCCCcCCCCC
Q 005227 611 GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETP-----PSSSSMLKHP 685 (707)
Q Consensus 611 ~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R-----~sa~e~L~Hp 685 (707)
+++-+..| -.+...-.+.++.||+.++|+.|-.+| .-.+++.+||
T Consensus 249 ----------iY~KI~~~--------------------~v~fP~~fs~~~kdLl~~LL~vD~t~R~gnlknG~~dIk~H~ 298 (355)
T KOG0616|consen 249 ----------IYEKILEG--------------------KVKFPSYFSSDAKDLLKKLLQVDLTKRFGNLKNGVEDIKNHP 298 (355)
T ss_pred ----------HHHHHHhC--------------------cccCCcccCHHHHHHHHHHHhhhhHhhhcCcCCCccccccCc
Confidence 11111111 011112233444567777777777777 3567899999
Q ss_pred CCCCCCCCCCcccccCcccC
Q 005227 686 YVSSDVSGSNLVSGVIPTIT 705 (707)
Q Consensus 686 ~f~~~~~~~~~~~~~~~~~~ 705 (707)
||.+-.+..-....+.||+-
T Consensus 299 wF~~v~W~~i~~r~ie~P~~ 318 (355)
T KOG0616|consen 299 WFKGVDWEAILQRKIEPPFE 318 (355)
T ss_pred ccccccHHHHhhccccCCCC
Confidence 99988875444444445443
No 18
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-45 Score=366.54 Aligned_cols=289 Identities=24% Similarity=0.370 Sum_probs=226.0
Q ss_pred HhcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEec--cCChhhHHHHHHHHHHHHccCCCcceeEEEEEEe-----CC
Q 005227 373 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQ--EGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE-----EG 444 (707)
Q Consensus 373 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~--~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~-----~~ 444 (707)
....|...+.||+|+||.|++|..+ +|+.||||++. .......++..+|+++|+.++|+||+.+.+.+.. -+
T Consensus 20 i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~ 99 (359)
T KOG0660|consen 20 IPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFN 99 (359)
T ss_pred ccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccc
Confidence 3456666889999999999999964 79999999987 3455567889999999999999999999999855 35
Q ss_pred eEEEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccc
Q 005227 445 EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSR 524 (707)
Q Consensus 445 ~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~ 524 (707)
..|+|+|+| .-+|...++. .+.++..++..+.+|+++||.|+|+.+ |+||||||+|+|++.+...||+|||+|+
T Consensus 100 DvYiV~elM-etDL~~iik~--~~~L~d~H~q~f~YQiLrgLKyiHSAn---ViHRDLKPsNll~n~~c~lKI~DFGLAR 173 (359)
T KOG0660|consen 100 DVYLVFELM-ETDLHQIIKS--QQDLTDDHAQYFLYQILRGLKYIHSAN---VIHRDLKPSNLLLNADCDLKICDFGLAR 173 (359)
T ss_pred eeEEehhHH-hhHHHHHHHc--CccccHHHHHHHHHHHHHhcchhhccc---ccccccchhheeeccCCCEEecccccee
Confidence 789999999 5699999954 344999999999999999999999999 9999999999999999999999999999
Q ss_pred cCCCCCCCCccccceecccccCCCccchhhhcc-CCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccch
Q 005227 525 LAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMF 603 (707)
Q Consensus 525 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~ 603 (707)
...... .....+....|..|+|||++.. ..|+.+.||||.||++.||++|+..|. +.+...++..+..
T Consensus 174 ~~~~~~-----~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFp-G~d~v~Ql~lI~~----- 242 (359)
T KOG0660|consen 174 YLDKFF-----EDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFP-GKDYVHQLQLILE----- 242 (359)
T ss_pred eccccC-----cccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCC-CCchHHHHHHHHH-----
Confidence 875431 1233456778999999999865 789999999999999999999987775 4444444443221
Q ss_pred hhccCCCCCCChHHHHHHH-HHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCC
Q 005227 604 SVIDGNMGSYPSECVEKFI-KLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSML 682 (707)
Q Consensus 604 ~~~~~~~~~~~~~~~~~l~-~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L 682 (707)
..+..+++....+. +-+..-++..|...+. .+...++..++.+.||+.+||++||.+|+||+|||
T Consensus 243 -----~lGtP~~e~l~~i~s~~ar~yi~slp~~p~~---------~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL 308 (359)
T KOG0660|consen 243 -----LLGTPSEEDLQKIRSEKARPYIKSLPQIPKQ---------PFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEAL 308 (359)
T ss_pred -----hcCCCCHHHHHHhccHHHHHHHHhCCCCCCC---------CHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHh
Confidence 12333333333332 1222233333332221 12345678888999999999999999999999999
Q ss_pred CCCCCCCCCC
Q 005227 683 KHPYVSSDVS 692 (707)
Q Consensus 683 ~Hp~f~~~~~ 692 (707)
+||||+.--.
T Consensus 309 ~hPYl~~~hd 318 (359)
T KOG0660|consen 309 AHPYLAPYHD 318 (359)
T ss_pred cChhhhhhcC
Confidence 9999976544
No 19
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-44 Score=376.57 Aligned_cols=265 Identities=22% Similarity=0.315 Sum_probs=216.8
Q ss_pred hcCCCccceEeeeCceEEEEEEe-CCCcEEEEEEeccCChhh---HHHHHHHHHHHHcc-CCCcceeEEEEEEeCCeEEE
Q 005227 374 TNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQG---EKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQML 448 (707)
Q Consensus 374 ~~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~---~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~l 448 (707)
.++|...+.||+|+|++|++|+. ..++.||||++.+..... .+.+..|-.+|.+| .||.|++|+-.|+++..+|+
T Consensus 72 ~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLYF 151 (604)
T KOG0592|consen 72 PNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLYF 151 (604)
T ss_pred hhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceEE
Confidence 45677889999999999999995 479999999997654333 24577899999999 89999999999999999999
Q ss_pred EEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCC
Q 005227 449 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 528 (707)
Q Consensus 449 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~ 528 (707)
|+||+++|+|.++|++.+ .+++...+.++.+|+.||+|||++| ||||||||+|||+|+||++||+|||.|+.+..
T Consensus 152 vLe~A~nGdll~~i~K~G--sfde~caR~YAAeIldAleylH~~G---IIHRDlKPENILLd~dmhikITDFGsAK~l~~ 226 (604)
T KOG0592|consen 152 VLEYAPNGDLLDLIKKYG--SFDETCARFYAAEILDALEYLHSNG---IIHRDLKPENILLDKDGHIKITDFGSAKILSP 226 (604)
T ss_pred EEEecCCCcHHHHHHHhC--cchHHHHHHHHHHHHHHHHHHHhcC---ceeccCChhheeEcCCCcEEEeeccccccCCh
Confidence 999999999999997764 4999999999999999999999999 99999999999999999999999999998865
Q ss_pred CCCCCc----c--ccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccc
Q 005227 529 PDIEGI----V--PAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMM 602 (707)
Q Consensus 529 ~~~~~~----~--~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~ 602 (707)
...... . ........+||..|.+||++.....+..+|+|+|||++|.|+.|++||....+..
T Consensus 227 ~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~Neyl------------ 294 (604)
T KOG0592|consen 227 SQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYL------------ 294 (604)
T ss_pred hhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHHH------------
Confidence 432200 0 1111255789999999999999999999999999999999999999997554311
Q ss_pred hhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCC
Q 005227 603 FSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSML 682 (707)
Q Consensus 603 ~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L 682 (707)
-+.+++..-.. -| +...+.+.||+.++|..||.+|+|++|+.
T Consensus 295 -----------------iFqkI~~l~y~-fp--------------------~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk 336 (604)
T KOG0592|consen 295 -----------------IFQKIQALDYE-FP--------------------EGFPEDARDLIKKLLVRDPSDRLTSQQIK 336 (604)
T ss_pred -----------------HHHHHHHhccc-CC--------------------CCCCHHHHHHHHHHHccCccccccHHHHh
Confidence 11111111111 11 11223345788899999999999999999
Q ss_pred CCCCCCCCCCC
Q 005227 683 KHPYVSSDVSG 693 (707)
Q Consensus 683 ~Hp~f~~~~~~ 693 (707)
+||||.+-.+.
T Consensus 337 ~HpFF~~Vdw~ 347 (604)
T KOG0592|consen 337 AHPFFEGVDWE 347 (604)
T ss_pred hCcccccCChh
Confidence 99999988773
No 20
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.6e-44 Score=364.26 Aligned_cols=275 Identities=26% Similarity=0.330 Sum_probs=217.9
Q ss_pred HhcCCCccceEeeeCceEEEEEE-eCCCcEEEEEEeccCChhh-HHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEE
Q 005227 373 ATNNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQG-EKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 450 (707)
Q Consensus 373 ~~~~~~~~~~lG~G~fg~Vy~~~-~~~~~~vavK~l~~~~~~~-~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~ 450 (707)
..+.|+..+.||.|..++||+|+ .+.++.||||++..+.-.. .+.+.+|+..|+.++||||++++..|..+...|+||
T Consensus 24 n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVm 103 (516)
T KOG0582|consen 24 NAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVM 103 (516)
T ss_pred CccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEee
Confidence 34678899999999999999999 4678999999998654433 478999999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCC
Q 005227 451 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 530 (707)
Q Consensus 451 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~ 530 (707)
.||.+|++.++++..-...+++..+..|.+++++||.|||++| .||||||+.||||+++|.|||+|||.+..+....
T Consensus 104 pfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G---~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G 180 (516)
T KOG0582|consen 104 PFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNG---HIHRDVKAGNILIDSDGTVKLADFGVSASLFDSG 180 (516)
T ss_pred hhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcC---ceecccccccEEEcCCCcEEEcCceeeeeecccC
Confidence 9999999999999877778999999999999999999999999 9999999999999999999999999987655433
Q ss_pred CCCccccceecccccCCCccchhhhcc--CCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccC
Q 005227 531 IEGIVPAHVSTVVKGTPGYLDPEYFLT--HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDG 608 (707)
Q Consensus 531 ~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 608 (707)
...........||++|||||+++. ..|+.|+||||||++..||.+|..||..-...
T Consensus 181 ---~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPm------------------- 238 (516)
T KOG0582|consen 181 ---DRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPM------------------- 238 (516)
T ss_pred ---ceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChH-------------------
Confidence 111122266789999999999654 68999999999999999999999999743321
Q ss_pred CCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCCCCCCCC
Q 005227 609 NMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVS 688 (707)
Q Consensus 609 ~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f~ 688 (707)
++...-++.+|- +|-+.-. -.+........+..|+..||+.||++||||+++|+|+||.
T Consensus 239 --------------kvLl~tLqn~pp-~~~t~~~------~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh~FFk 297 (516)
T KOG0582|consen 239 --------------KVLLLTLQNDPP-TLLTSGL------DKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKHAFFK 297 (516)
T ss_pred --------------HHHHHHhcCCCC-CcccccC------ChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhccHHHh
Confidence 111111222221 0000000 0000111122555788889999999999999999999998
Q ss_pred CCCCC
Q 005227 689 SDVSG 693 (707)
Q Consensus 689 ~~~~~ 693 (707)
.....
T Consensus 298 ~~k~~ 302 (516)
T KOG0582|consen 298 KAKSK 302 (516)
T ss_pred hccch
Confidence 76653
No 21
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=9.5e-44 Score=370.64 Aligned_cols=281 Identities=21% Similarity=0.308 Sum_probs=223.5
Q ss_pred HHhcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCChhhH---HHHHHHHHHHHccCCCcceeEEEEEEeCCeEE
Q 005227 372 LATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGE---KEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQM 447 (707)
Q Consensus 372 ~~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~---~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~ 447 (707)
...++|+.+..||+|+||.||+|+-+ +|..+|+|++++...... +.++.|-.+|....+|+||+++-.|++.+.+|
T Consensus 138 ~~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LY 217 (550)
T KOG0605|consen 138 LSLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLY 217 (550)
T ss_pred CCcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeE
Confidence 35678999999999999999999954 799999999988655443 45788999999999999999999999999999
Q ss_pred EEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCC
Q 005227 448 LVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAP 527 (707)
Q Consensus 448 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~ 527 (707)
|||||++||++..+|... ..|++..++.++.+++.|++-||+.| +|||||||+|+|||..|++||+||||+.-+.
T Consensus 218 LiMEylPGGD~mTLL~~~--~~L~e~~arfYiaE~vlAI~~iH~~g---yIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~ 292 (550)
T KOG0605|consen 218 LIMEYLPGGDMMTLLMRK--DTLTEDWARFYIAETVLAIESIHQLG---YIHRDIKPDNLLIDAKGHIKLSDFGLSTGLD 292 (550)
T ss_pred EEEEecCCccHHHHHHhc--CcCchHHHHHHHHHHHHHHHHHHHcC---cccccCChhheeecCCCCEeeccccccchhh
Confidence 999999999999999654 46999999999999999999999999 9999999999999999999999999985432
Q ss_pred CCCC------------------CCccc-----c-----------------ceecccccCCCccchhhhccCCCCCchhhH
Q 005227 528 VPDI------------------EGIVP-----A-----------------HVSTVVKGTPGYLDPEYFLTHKLTDKSDVY 567 (707)
Q Consensus 528 ~~~~------------------~~~~~-----~-----------------~~~~~~~gt~~y~aPE~~~~~~~s~~sDVw 567 (707)
.... ....+ . ......+|||.|||||++.+..|+..+|+|
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwW 372 (550)
T KOG0605|consen 293 KKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWW 372 (550)
T ss_pred hhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHH
Confidence 1100 00000 0 001235799999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 005227 568 SLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELE 647 (707)
Q Consensus 568 SlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~ 647 (707)
|+|||||||+.|.+||........+-.. .. -..||..-++.+.
T Consensus 373 SLG~ImyEmLvGyPPF~s~tp~~T~rkI--------------------------~n-wr~~l~fP~~~~~---------- 415 (550)
T KOG0605|consen 373 SLGCIMYEMLVGYPPFCSETPQETYRKI--------------------------VN-WRETLKFPEEVDL---------- 415 (550)
T ss_pred HHHHHHHHHHhCCCCCCCCCHHHHHHHH--------------------------HH-HhhhccCCCcCcc----------
Confidence 9999999999999999754432221111 00 0123433222222
Q ss_pred HhhhcCCCCCCCCCccccCCCCCCCCCCCC---CCcCCCCCCCCCCCCCCCcccccCcccCC
Q 005227 648 SIWNMMPESDTKTPEFINSEHTSKEETPPS---SSSMLKHPYVSSDVSGSNLVSGVIPTITP 706 (707)
Q Consensus 648 ~~~~~~~~~~~~~~dll~~~L~~dP~~R~s---a~e~L~Hp~f~~~~~~~~~~~~~~~~~~~ 706 (707)
++++.|||.++|+ ||++|+- ++|+.+||||.+-.+ +.+....|++-|
T Consensus 416 ---------s~eA~DLI~rll~-d~~~RLG~~G~~EIK~HPfF~~v~W--~~l~~~~apfvP 465 (550)
T KOG0605|consen 416 ---------SDEAKDLITRLLC-DPENRLGSKGAEEIKKHPFFKGVDW--DHLREMPAPFVP 465 (550)
T ss_pred ---------cHHHHHHHHHHhc-CHHHhcCcccHHHHhcCCccccCCc--chhhcCCCCCCC
Confidence 2456689999999 9999985 789999999999988 666665566655
No 22
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-44 Score=387.62 Aligned_cols=271 Identities=28% Similarity=0.475 Sum_probs=230.9
Q ss_pred cccHHHHHHHhcCC---------CccceEeeeCceEEEEEEeC----CCcEEEEEEeccCChhh-HHHHHHHHHHHHccC
Q 005227 364 SFTYGEMALATNNF---------NSSTQIGQGGYGKVYKGILP----DGTVVAVKRAQEGSLQG-EKEFLTEIQFLSRLH 429 (707)
Q Consensus 364 ~~~~~~l~~~~~~~---------~~~~~lG~G~fg~Vy~~~~~----~~~~vavK~l~~~~~~~-~~~~~~E~~~l~~l~ 429 (707)
.++|+|.-.+...| .+.++||.|.||.||+|.++ ....||||.++....+. ..+|+.|+.||.++.
T Consensus 609 P~TYEDPnqAvreFakEId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFd 688 (996)
T KOG0196|consen 609 PHTYEDPNQAVREFAKEIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFD 688 (996)
T ss_pred CccccCccHHHHHhhhhcChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCC
Confidence 46777665554443 45789999999999999975 24579999999866554 568999999999999
Q ss_pred CCcceeEEEEEEeCCeEEEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEE
Q 005227 430 HRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILL 509 (707)
Q Consensus 430 h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl 509 (707)
||||++|.|+.......+||+|||+||+|+.+|+.+..+ +.+.+...+.++||.||+||-+.+ +|||||.++||||
T Consensus 689 HPNIIrLEGVVTks~PvMIiTEyMENGsLDsFLR~~DGq-ftviQLVgMLrGIAsGMkYLsdm~---YVHRDLAARNILV 764 (996)
T KOG0196|consen 689 HPNIIRLEGVVTKSKPVMIITEYMENGSLDSFLRQNDGQ-FTVIQLVGMLRGIASGMKYLSDMN---YVHRDLAARNILV 764 (996)
T ss_pred CCcEEEEEEEEecCceeEEEhhhhhCCcHHHHHhhcCCc-eEeehHHHHHHHHHHHhHHHhhcC---chhhhhhhhheee
Confidence 999999999999999999999999999999999887655 999999999999999999999999 9999999999999
Q ss_pred cCCCcEEEeeecccccCCCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc-CCCCCCCCch
Q 005227 510 DHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKN 588 (707)
Q Consensus 510 ~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~ellt-G~~pf~~~~~ 588 (707)
+.+..+||+|||+++.+..+. +. ......-.-+.+|.|||.+...+++.+|||||||++|||.++ |.+||.+..+
T Consensus 765 NsnLvCKVsDFGLSRvledd~-~~---~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSN 840 (996)
T KOG0196|consen 765 NSNLVCKVSDFGLSRVLEDDP-EA---AYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN 840 (996)
T ss_pred ccceEEEeccccceeecccCC-Cc---cccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccch
Confidence 999999999999999775432 11 112222223579999999999999999999999999999998 9999976654
Q ss_pred hHHHHHHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhc
Q 005227 589 IVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNM 652 (707)
Q Consensus 589 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~ 652 (707)
. +.+..+.++.+.+.|.+|+..++++|..||+++-.+||++.+++..|.++...
T Consensus 841 Q----------dVIkaIe~gyRLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIrn 894 (996)
T KOG0196|consen 841 Q----------DVIKAIEQGYRLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIRN 894 (996)
T ss_pred H----------HHHHHHHhccCCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcC
Confidence 1 23344556677788999999999999999999999999999999999987653
No 23
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.1e-44 Score=376.34 Aligned_cols=258 Identities=25% Similarity=0.408 Sum_probs=216.3
Q ss_pred cCCCccceEeeeCceEEEEEEe-CCCcEEEEEEeccCChhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEecC
Q 005227 375 NNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 453 (707)
Q Consensus 375 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~ 453 (707)
..|+...+||+|+.|.||.|.. .+++.||||++........+-+.+|+.+|+..+|+|||++++.|...++.|+|||||
T Consensus 273 ~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym 352 (550)
T KOG0578|consen 273 SKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYM 352 (550)
T ss_pred hhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEeec
Confidence 4677789999999999999994 578999999998877666778899999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCCC
Q 005227 454 SNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEG 533 (707)
Q Consensus 454 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 533 (707)
++|+|.+.+... .+++.++..|++++++||+|||.++ |+|||||.+|||++.+|.+||+|||++..+....
T Consensus 353 ~ggsLTDvVt~~---~~~E~qIA~Icre~l~aL~fLH~~g---IiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~--- 423 (550)
T KOG0578|consen 353 EGGSLTDVVTKT---RMTEGQIAAICREILQGLKFLHARG---IIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQ--- 423 (550)
T ss_pred CCCchhhhhhcc---cccHHHHHHHHHHHHHHHHHHHhcc---eeeeccccceeEeccCCcEEEeeeeeeecccccc---
Confidence 999999998543 3999999999999999999999999 9999999999999999999999999998765432
Q ss_pred ccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCCCCCC
Q 005227 534 IVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSY 613 (707)
Q Consensus 534 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 613 (707)
.......||+.|||||++....|..+.||||||++++||+-|.+||.....+......
T Consensus 424 ----~KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLI------------------ 481 (550)
T KOG0578|consen 424 ----SKRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLI------------------ 481 (550)
T ss_pred ----CccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHHHHHHH------------------
Confidence 2456788999999999999999999999999999999999999999754432211111
Q ss_pred ChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCCCCCCCCCCCC
Q 005227 614 PSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSSDVS 692 (707)
Q Consensus 614 ~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f~~~~~ 692 (707)
+. + -+|.. +.....+..+.|||.+||+.|+++|++|+|+|+||||..-..
T Consensus 482 -----------a~---n----g~P~l-----------k~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~HpFl~~a~p 531 (550)
T KOG0578|consen 482 -----------AT---N----GTPKL-----------KNPEKLSPELKDFLDRCLVVDVEQRASAKELLEHPFLKMAKP 531 (550)
T ss_pred -----------hh---c----CCCCc-----------CCccccCHHHHHHHHHHhhcchhcCCCHHHHhcChhhhhcCC
Confidence 00 0 01110 111233445568999999999999999999999999955444
No 24
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=6.1e-44 Score=382.35 Aligned_cols=291 Identities=23% Similarity=0.347 Sum_probs=218.9
Q ss_pred CCCccceEeeeCceEEEEEEe-CCCcEEEEEEeccCChhhHHHHHHHHHHHHccC-C-----CcceeEEEEEEeCCeEEE
Q 005227 376 NFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLH-H-----RNLVSLVGYCDEEGEQML 448 (707)
Q Consensus 376 ~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-h-----~nIv~l~~~~~~~~~~~l 448 (707)
+|++.+.||+|+||.|-+|.. ++++.||||+++.. .....+...|+.+|..++ | -|+|+++++|...++.||
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~-k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~Hlci 265 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNK-KRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCI 265 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccC-hHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceee
Confidence 899999999999999999995 47999999999874 334457788999999996 4 389999999999999999
Q ss_pred EEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcC--CCcEEEeeecccccC
Q 005227 449 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDH--KFTAKVADFGLSRLA 526 (707)
Q Consensus 449 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~--~~~~kl~DFGla~~~ 526 (707)
|+|.+ ..+|+++++.+....++...++.|+.||+.||.+||+.+ |||+||||+||||.+ ...+||+|||.|+..
T Consensus 266 VfELL-~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~---IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~ 341 (586)
T KOG0667|consen 266 VFELL-STNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELG---IIHCDLKPENILLKDPKRSRIKVIDFGSSCFE 341 (586)
T ss_pred eehhh-hhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeccCChhheeeccCCcCceeEEeccccccc
Confidence 99999 569999999988889999999999999999999999999 999999999999964 347999999999876
Q ss_pred CCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhc
Q 005227 527 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVI 606 (707)
Q Consensus 527 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~ 606 (707)
.. .......+..|+|||++.|.+|+.+.||||||||+.||++| .|+..+.+..+++..+.+..
T Consensus 342 ~q----------~vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG-~PLfpG~ne~DQl~~I~e~l------ 404 (586)
T KOG0667|consen 342 SQ----------RVYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTG-EPLFPGDNEYDQLARIIEVL------ 404 (586)
T ss_pred CC----------cceeeeeccccccchhhccCCCCCccceeehhhhHHhHhcC-ccccCCCCHHHHHHHHHHHh------
Confidence 42 22366788999999999999999999999999999999999 55556666666665543221
Q ss_pred cCCCCCCChHHHHHH---HH-------HHHHhcccCCCCCCCHHHHHHHHHHhh-------------hcCC-CCCCCCCc
Q 005227 607 DGNMGSYPSECVEKF---IK-------LALKCCQDETDARPSMSEVMRELESIW-------------NMMP-ESDTKTPE 662 (707)
Q Consensus 607 ~~~~~~~~~~~~~~l---~~-------l~~~c~~~~p~~RPt~~~v~~~L~~~~-------------~~~~-~~~~~~~d 662 (707)
+..|....+.. .+ ....|...+-.+-+...++...+.... ...+ ..+..+.|
T Consensus 405 ----G~Pp~~mL~~~~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~d 480 (586)
T KOG0667|consen 405 ----GLPPPKMLDTAKKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFID 480 (586)
T ss_pred ----CCCCHHHHHhccccceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHH
Confidence 11111111100 00 011122222110011111111111111 1111 22334578
Q ss_pred cccCCCCCCCCCCCCCCcCCCCCCCCCCCC
Q 005227 663 FINSEHTSKEETPPSSSSMLKHPYVSSDVS 692 (707)
Q Consensus 663 ll~~~L~~dP~~R~sa~e~L~Hp~f~~~~~ 692 (707)
||.+||+|||.+|+|+.|||+||||++...
T Consensus 481 flk~~L~~dP~~R~tp~qal~Hpfl~~~~~ 510 (586)
T KOG0667|consen 481 FLKRCLEWDPAERITPAQALNHPFLTGTSL 510 (586)
T ss_pred HHHHHhccCchhcCCHHHHhcCcccccccc
Confidence 999999999999999999999999995554
No 25
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=8.7e-44 Score=369.90 Aligned_cols=256 Identities=27% Similarity=0.434 Sum_probs=217.2
Q ss_pred cCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCCh--hhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEe
Q 005227 375 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 451 (707)
Q Consensus 375 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E 451 (707)
++|.+.+.||+|.||.||||+.+ +.+.||+|.+.+... ...+.+.+|+++++.++|||||.++++|+...+.|+|+|
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte 81 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTE 81 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEeh
Confidence 57888999999999999999965 789999999876432 234678999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCC
Q 005227 452 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 531 (707)
Q Consensus 452 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 531 (707)
|+.| +|..+|...+ .++++.+..++.++..||.|||+.+ |+|||+||.|||++..+.+|++|||+|+.+...
T Consensus 82 ~a~g-~L~~il~~d~--~lpEe~v~~~a~~LVsaL~yLhs~r---ilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~-- 153 (808)
T KOG0597|consen 82 YAVG-DLFTILEQDG--KLPEEQVRAIAYDLVSALYYLHSNR---ILHRDMKPQNILLEKGGTLKLCDFGLARAMSTN-- 153 (808)
T ss_pred hhhh-hHHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHHhcC---cccccCCcceeeecCCCceeechhhhhhhcccC--
Confidence 9976 9999997654 4999999999999999999999999 999999999999999999999999999977542
Q ss_pred CCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCCCC
Q 005227 532 EGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 611 (707)
Q Consensus 532 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 611 (707)
....+...||+-|||||+..+++|+..+|.||+||++||+++|++||..
T Consensus 154 -----t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a-------------------------- 202 (808)
T KOG0597|consen 154 -----TSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYA-------------------------- 202 (808)
T ss_pred -----ceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchH--------------------------
Confidence 4566778999999999999999999999999999999999999999952
Q ss_pred CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCCCCCCCCCCC
Q 005227 612 SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSSDV 691 (707)
Q Consensus 612 ~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f~~~~ 691 (707)
..+.+++..-+. +|-.-|+ +.+..+..|++.+|+.||..|+|=.+++.|||..+.+
T Consensus 203 -------~si~~Lv~~I~~-d~v~~p~----------------~~S~~f~nfl~gLL~kdP~~RltW~~Ll~HpF~k~~~ 258 (808)
T KOG0597|consen 203 -------RSITQLVKSILK-DPVKPPS----------------TASSSFVNFLQGLLIKDPAQRLTWTDLLGHPFWKGKI 258 (808)
T ss_pred -------HHHHHHHHHHhc-CCCCCcc----------------cccHHHHHHHHHHhhcChhhcccHHHHhcChHHhhhh
Confidence 223333333333 3333332 2233455788899999999999999999999998877
Q ss_pred CC
Q 005227 692 SG 693 (707)
Q Consensus 692 ~~ 693 (707)
..
T Consensus 259 ~~ 260 (808)
T KOG0597|consen 259 NI 260 (808)
T ss_pred hh
Confidence 64
No 26
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2e-42 Score=368.69 Aligned_cols=255 Identities=26% Similarity=0.387 Sum_probs=209.3
Q ss_pred HHhcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccC----Ch-hhHHHHHHHHHHHHccC-CCcceeEEEEEEeCC
Q 005227 372 LATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEG----SL-QGEKEFLTEIQFLSRLH-HRNLVSLVGYCDEEG 444 (707)
Q Consensus 372 ~~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~----~~-~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~ 444 (707)
...++|...+.||+|+||+|+.|... +++.||+|++... .. ...+.+.+|+.++++++ ||||+++++++....
T Consensus 14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~ 93 (370)
T KOG0583|consen 14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPT 93 (370)
T ss_pred cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCC
Confidence 44578999999999999999999854 7899999977653 11 23456778999999998 999999999999999
Q ss_pred eEEEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCC-CcEEEeeeccc
Q 005227 445 EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHK-FTAKVADFGLS 523 (707)
Q Consensus 445 ~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~-~~~kl~DFGla 523 (707)
..++||||+.+|+|.+++.. ..++.+..++.++.|++.|++|+|+++ |+||||||+|||+|.+ +++||+|||++
T Consensus 94 ~~~ivmEy~~gGdL~~~i~~--~g~l~E~~ar~~F~Qlisav~y~H~~g---i~HRDLK~ENilld~~~~~~Kl~DFG~s 168 (370)
T KOG0583|consen 94 KIYIVMEYCSGGDLFDYIVN--KGRLKEDEARKYFRQLISAVAYCHSRG---IVHRDLKPENILLDGNEGNLKLSDFGLS 168 (370)
T ss_pred eEEEEEEecCCccHHHHHHH--cCCCChHHHHHHHHHHHHHHHHHHhCC---EeeCCCCHHHEEecCCCCCEEEeccccc
Confidence 99999999999999999977 345888999999999999999999999 9999999999999999 99999999999
Q ss_pred ccCCCCCCCCccccceecccccCCCccchhhhccCC-CC-CchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhccc
Q 005227 524 RLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHK-LT-DKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSM 601 (707)
Q Consensus 524 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~s-~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~ 601 (707)
..... ........+||+.|+|||++.+.. |+ .++||||+||+||.|++|+.||++.... .
T Consensus 169 ~~~~~-------~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~-~---------- 230 (370)
T KOG0583|consen 169 AISPG-------EDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVP-N---------- 230 (370)
T ss_pred cccCC-------CCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHH-H----------
Confidence 87631 123456778999999999999977 86 6799999999999999999999753221 0
Q ss_pred chhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCC--CCCCCccccCCCCCCCCCCCCCC
Q 005227 602 MFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPES--DTKTPEFINSEHTSKEETPPSSS 679 (707)
Q Consensus 602 ~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~--~~~~~dll~~~L~~dP~~R~sa~ 679 (707)
+..-+...- -.+|.. +..+.+|+.+||..||.+|+|+.
T Consensus 231 -------------------l~~ki~~~~---------------------~~~p~~~~S~~~~~Li~~mL~~~P~~R~t~~ 270 (370)
T KOG0583|consen 231 -------------------LYRKIRKGE---------------------FKIPSYLLSPEARSLIEKMLVPDPSTRITLL 270 (370)
T ss_pred -------------------HHHHHhcCC---------------------ccCCCCcCCHHHHHHHHHHcCCCcccCCCHH
Confidence 000011100 011111 44456788889999999999999
Q ss_pred cCCCCCCCCC
Q 005227 680 SMLKHPYVSS 689 (707)
Q Consensus 680 e~L~Hp~f~~ 689 (707)
|+++||||..
T Consensus 271 ~i~~h~w~~~ 280 (370)
T KOG0583|consen 271 EILEHPWFQK 280 (370)
T ss_pred HHhhChhhcc
Confidence 9999999987
No 27
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=1.6e-42 Score=348.37 Aligned_cols=294 Identities=24% Similarity=0.362 Sum_probs=222.8
Q ss_pred hcCCCccceEeeeCceEEEEEEe-CCCcEEEEEEeccCChh--hHHHHHHHHHHHHccCCCc-ceeEEEEEEeCC-----
Q 005227 374 TNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQ--GEKEFLTEIQFLSRLHHRN-LVSLVGYCDEEG----- 444 (707)
Q Consensus 374 ~~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~--~~~~~~~E~~~l~~l~h~n-Iv~l~~~~~~~~----- 444 (707)
...|+..++||+|+||+||+|+. .+|+.||+|++...... ......+|+.+++.++|+| ||++++++...+
T Consensus 10 ~~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~ 89 (323)
T KOG0594|consen 10 MFDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGI 89 (323)
T ss_pred HHHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeeccccccc
Confidence 34566788899999999999995 48999999998765432 3456789999999999999 999999998777
Q ss_pred -eEEEEEecCCCCCHHHHHhhcCC--CCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeec
Q 005227 445 -EQMLVYEFMSNGTLRDQLSAKSK--EPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFG 521 (707)
Q Consensus 445 -~~~lV~E~~~~gsL~~~l~~~~~--~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFG 521 (707)
..++||||++ -+|..++..... ..++...++.++.||++||+|||+++ |+||||||.|||++++|.+||+|||
T Consensus 90 ~~l~lvfe~~d-~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~---IlHRDLKPQNlLi~~~G~lKlaDFG 165 (323)
T KOG0594|consen 90 GKLYLVFEFLD-RDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHG---ILHRDLKPQNLLISSSGVLKLADFG 165 (323)
T ss_pred ceEEEEEEeec-ccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCC---eecccCCcceEEECCCCcEeeeccc
Confidence 7899999995 599999987553 35777899999999999999999999 9999999999999999999999999
Q ss_pred ccccCCCCCCCCccccceecccccCCCccchhhhccC-CCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcc
Q 005227 522 LSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSS 600 (707)
Q Consensus 522 la~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~ 600 (707)
+|+....+ ....+..++|..|+|||++.+. .|+...||||+||++.||++++..|....+ .++...++..-
T Consensus 166 lAra~~ip-------~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se-~~ql~~If~~l 237 (323)
T KOG0594|consen 166 LARAFSIP-------MRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSE-IDQLFRIFRLL 237 (323)
T ss_pred hHHHhcCC-------cccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcH-HHHHHHHHHHc
Confidence 99965422 3445667889999999999985 799999999999999999998777765544 44433332211
Q ss_pred cchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCc
Q 005227 601 MMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSS 680 (707)
Q Consensus 601 ~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e 680 (707)
+...++.+..+..+... +....+++....+. ...+..++...|++.+||+++|++|+||+.
T Consensus 238 ----------GtP~e~~Wp~v~~~~~~--k~~f~~~~~~~~l~-------~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~ 298 (323)
T KOG0594|consen 238 ----------GTPNEKDWPGVSSLPDY--KAPFPKWPGPKDLS-------SILPKLDPDGIELLSKLLQYDPAKRISAKG 298 (323)
T ss_pred ----------CCCCccCCCCccccccc--cccCcCCCCccchH-------HhccccCccHHHHHHHHhccCcccCcCHHH
Confidence 11111111111111110 00111122222222 233455577889999999999999999999
Q ss_pred CCCCCCCCCCCCCCCccc
Q 005227 681 MLKHPYVSSDVSGSNLVS 698 (707)
Q Consensus 681 ~L~Hp~f~~~~~~~~~~~ 698 (707)
+|.||||.......-.+.
T Consensus 299 al~h~yf~~~~~~~~~~~ 316 (323)
T KOG0594|consen 299 ALTHPYFSELPEKSSQLL 316 (323)
T ss_pred HhcChhhcccccchhhhh
Confidence 999999988766544433
No 28
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.8e-43 Score=354.16 Aligned_cols=276 Identities=22% Similarity=0.326 Sum_probs=206.1
Q ss_pred CCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHccCCCcceeEEEEEEeCC-----eEEEE
Q 005227 376 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG-----EQMLV 449 (707)
Q Consensus 376 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~-----~~~lV 449 (707)
.|...+.+|+|+||.||+|... +++.||||+...+... -.+|+++|+.++|||||++.-+|.... ...+|
T Consensus 25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~----knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlV 100 (364)
T KOG0658|consen 25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRY----KNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLV 100 (364)
T ss_pred EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCc----CcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHH
Confidence 4666899999999999999964 6799999987654332 236999999999999999999885432 34689
Q ss_pred EecCCCCCHHHHHhh--cCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCC-CcEEEeeecccccC
Q 005227 450 YEFMSNGTLRDQLSA--KSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHK-FTAKVADFGLSRLA 526 (707)
Q Consensus 450 ~E~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~-~~~kl~DFGla~~~ 526 (707)
||||+. +|.+.++. ..+..++...++-+.+||.+||+|||+.+ |+||||||.|+|+|.+ |.+||+|||.|+.+
T Consensus 101 leymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~---IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L 176 (364)
T KOG0658|consen 101 LEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHG---ICHRDIKPQNLLVDPDTGVLKICDFGSAKVL 176 (364)
T ss_pred HHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcC---cccCCCChheEEEcCCCCeEEeccCCcceee
Confidence 999975 99999975 23456888889999999999999999988 9999999999999976 99999999999987
Q ss_pred CCCCCCCccccceecccccCCCccchhhhcc-CCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhh
Q 005227 527 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSV 605 (707)
Q Consensus 527 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~ 605 (707)
...+ .......|..|+|||.+.+ ..|+.+.||||.||++.||+-|++-|.. ++..+++..+...
T Consensus 177 ~~~e--------pniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG-~s~~dQL~eIik~------ 241 (364)
T KOG0658|consen 177 VKGE--------PNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPG-DSSVDQLVEIIKV------ 241 (364)
T ss_pred ccCC--------CceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCC-CCHHHHHHHHHHH------
Confidence 6432 2345667899999999998 6799999999999999999999777754 4444444333221
Q ss_pred ccCCCCCCChHHHHHHHHHHHHhcccC--CCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCCC
Q 005227 606 IDGNMGSYPSECVEKFIKLALKCCQDE--TDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLK 683 (707)
Q Consensus 606 ~~~~~~~~~~~~~~~l~~l~~~c~~~~--p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~ 683 (707)
++....+... |++.+ -.+-|.....- +.+ -.....+++..||+.++|+++|.+|.+|.|+|.
T Consensus 242 ----lG~Pt~e~I~--------~mn~~y~~~~~p~ik~~~--~~~--~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~ 305 (364)
T KOG0658|consen 242 ----LGTPTREDIK--------SMNPNYTEFKFPQIKAHP--WHK--VFFKRLPPDALDLLSKLLQYSPSKRLSALEALA 305 (364)
T ss_pred ----hCCCCHHHHh--------hcCcccccccCccccccc--cee--ecccCCCHHHHHHHHHHhccChhhcCCHHHHhc
Confidence 1111111111 11211 01111111000 000 123455667789999999999999999999999
Q ss_pred CCCCCCC
Q 005227 684 HPYVSSD 690 (707)
Q Consensus 684 Hp~f~~~ 690 (707)
||||+.-
T Consensus 306 h~fFdel 312 (364)
T KOG0658|consen 306 HPFFDEL 312 (364)
T ss_pred chhhHHh
Confidence 9999643
No 29
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=4e-42 Score=359.65 Aligned_cols=281 Identities=23% Similarity=0.347 Sum_probs=208.5
Q ss_pred cCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCCh-hhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEec
Q 005227 375 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 452 (707)
Q Consensus 375 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~ 452 (707)
++|...+.||+|+||+||+|..+ +++.||+|.+..... .....+.+|++++++++||||+++++++..++..++||||
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 84 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEY 84 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeC
Confidence 56889999999999999999965 789999999875332 2345678999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCC
Q 005227 453 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 532 (707)
Q Consensus 453 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 532 (707)
++ ++|.+++.... ..+++..+..++.||+.||+|||+++ |+||||||+|||+++++.+||+|||+++......
T Consensus 85 ~~-~~l~~~l~~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~-- 157 (288)
T cd07871 85 LD-SDLKQYLDNCG-NLMSMHNVKIFMFQLLRGLSYCHKRK---ILHRDLKPQNLLINEKGELKLADFGLARAKSVPT-- 157 (288)
T ss_pred CC-cCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCCCCEEECcCcceeeccCCC--
Confidence 97 59999886543 35789999999999999999999998 9999999999999999999999999997543221
Q ss_pred CccccceecccccCCCccchhhhcc-CCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCCCC
Q 005227 533 GIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 611 (707)
Q Consensus 533 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 611 (707)
.......+++.|+|||++.+ ..++.++||||+||++|||++|+.||..... .+........ .+
T Consensus 158 -----~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~-~~~~~~~~~~----------~~ 221 (288)
T cd07871 158 -----KTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTV-KEELHLIFRL----------LG 221 (288)
T ss_pred -----ccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHH----------hC
Confidence 11233467899999999876 5689999999999999999999999965432 1211111100 01
Q ss_pred CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCCCCCCC
Q 005227 612 SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYV 687 (707)
Q Consensus 612 ~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f 687 (707)
..+.+....+.......-...|..|+.. .....+..+....|||.+||++||.+|+|++|+|+||||
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~hp~f 288 (288)
T cd07871 222 TPTEETWPGITSNEEFRSYLFPQYRAQP---------LINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRHSYF 288 (288)
T ss_pred CCChHHhhccccchhhhccccCccCCCc---------hHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcCCCC
Confidence 1111111111000000000011111110 111223445667899999999999999999999999998
No 30
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-42 Score=364.03 Aligned_cols=269 Identities=25% Similarity=0.460 Sum_probs=221.3
Q ss_pred ccHHHHHHHhcCCCccceEeeeCceEEEEEEeCCCcEEEEEEeccCChh--hHHHHHHHHHHHHccCCCcceeEEEEEEe
Q 005227 365 FTYGEMALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQ--GEKEFLTEIQFLSRLHHRNLVSLVGYCDE 442 (707)
Q Consensus 365 ~~~~~l~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~--~~~~~~~E~~~l~~l~h~nIv~l~~~~~~ 442 (707)
.+.+++++..+.+.+.+.||+|.||+||+|.|.. .||||+++..... ..+.|+.|+.++++-+|.||+-|.|||..
T Consensus 382 ~s~~~WeIp~~ev~l~~rIGsGsFGtV~Rg~whG--dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~ 459 (678)
T KOG0193|consen 382 DSLEEWEIPPEEVLLGERIGSGSFGTVYRGRWHG--DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMN 459 (678)
T ss_pred ccccccccCHHHhhccceeccccccceeeccccc--ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcC
Confidence 3346777777778889999999999999999853 5999999865443 45789999999999999999999999998
Q ss_pred CCeEEEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecc
Q 005227 443 EGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGL 522 (707)
Q Consensus 443 ~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGl 522 (707)
+.. .||+.+|+|.+|+.+++... ..|+..+.+.||+|||+|+.|||.++ |||||||..||++.+++.|||+|||+
T Consensus 460 p~~-AIiTqwCeGsSLY~hlHv~e-tkfdm~~~idIAqQiaqGM~YLHAK~---IIHrDLKSnNIFl~~~~kVkIgDFGL 534 (678)
T KOG0193|consen 460 PPL-AIITQWCEGSSLYTHLHVQE-TKFDMNTTIDIAQQIAQGMDYLHAKN---IIHRDLKSNNIFLHEDLKVKIGDFGL 534 (678)
T ss_pred Cce-eeeehhccCchhhhhccchh-hhhhHHHHHHHHHHHHHhhhhhhhhh---hhhhhccccceEEccCCcEEEecccc
Confidence 877 99999999999999998754 56999999999999999999999999 99999999999999999999999999
Q ss_pred cccCCCCCCCCccccceecccccCCCccchhhhcc---CCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhc
Q 005227 523 SRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT---HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQS 599 (707)
Q Consensus 523 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~ 599 (707)
+..-..- ..........|...|||||+++. .+|+..+|||||||++|||++|..||. .... +
T Consensus 535 atvk~~w-----~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPys-i~~~---------d 599 (678)
T KOG0193|consen 535 ATVKTRW-----SGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYS-IQNR---------D 599 (678)
T ss_pred eeeeeee-----ccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcC-CCCh---------h
Confidence 8643211 11222334457889999999975 579999999999999999999999997 3321 1
Q ss_pred ccchhhccCCC----CCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCC
Q 005227 600 SMMFSVIDGNM----GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPE 655 (707)
Q Consensus 600 ~~~~~~~~~~~----~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~ 655 (707)
..++.+-.+.+ .....+|+.++.+++..||..++++||.+.+++..|+.+....|.
T Consensus 600 qIifmVGrG~l~pd~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~~~pk 659 (678)
T KOG0193|consen 600 QIIFMVGRGYLMPDLSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLPSLPK 659 (678)
T ss_pred heEEEecccccCccchhhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhhcccc
Confidence 22233333321 224568889999999999999999999999999998887765543
No 31
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=4.4e-42 Score=358.79 Aligned_cols=200 Identities=27% Similarity=0.414 Sum_probs=175.5
Q ss_pred CCCccceEeeeCceEEEEEEe-CCCcEEEEEEeccCCh---hhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEe
Q 005227 376 NFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 451 (707)
Q Consensus 376 ~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E 451 (707)
.|+..+.||+|+||+||+|.. .+++.||+|.+..... .....+.+|++++++++|+||+++++++.+.+..++|||
T Consensus 1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05631 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEE
Confidence 377789999999999999996 4799999999865332 223467899999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCC
Q 005227 452 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 531 (707)
Q Consensus 452 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 531 (707)
|+++|+|.+++.......+++..++.++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||++......
T Consensus 81 ~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~-- 155 (285)
T cd05631 81 IMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRER---IVYRDLKPENILLDDRGHIRISDLGLAVQIPEG-- 155 (285)
T ss_pred ecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCC--
Confidence 999999998887655557899999999999999999999998 999999999999999999999999999765321
Q ss_pred CCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCC
Q 005227 532 EGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 586 (707)
Q Consensus 532 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~ 586 (707)
.......||..|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 156 ------~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~ 204 (285)
T cd05631 156 ------ETVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKR 204 (285)
T ss_pred ------CeecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCC
Confidence 1123346899999999999999999999999999999999999999754
No 32
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1e-41 Score=370.86 Aligned_cols=282 Identities=20% Similarity=0.246 Sum_probs=215.8
Q ss_pred hcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEec
Q 005227 374 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 452 (707)
Q Consensus 374 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~ 452 (707)
..+|++.+.||+|+||.||+|... +++.||+|.... ..+.+|++++++++||||+++++++......++|+|+
T Consensus 91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~------~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~ 164 (391)
T PHA03212 91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQR------GGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPR 164 (391)
T ss_pred cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhh------hhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEec
Confidence 457999999999999999999964 789999997532 3567899999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCC
Q 005227 453 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 532 (707)
Q Consensus 453 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 532 (707)
+. ++|.+++... ..+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+|+......
T Consensus 165 ~~-~~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~ylH~~~---IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~-- 236 (391)
T PHA03212 165 YK-TDLYCYLAAK--RNIAICDILAIERSVLRAIQYLHENR---IIHRDIKAENIFINHPGDVCLGDFGAACFPVDIN-- 236 (391)
T ss_pred CC-CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChHhEEEcCCCCEEEEeCCccccccccc--
Confidence 94 7898888654 35889999999999999999999998 9999999999999999999999999997532211
Q ss_pred CccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCch------hHHHHHHHhhcccchhhc
Q 005227 533 GIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKN------IVREVNIAYQSSMMFSVI 606 (707)
Q Consensus 533 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~~~------~~~~~~~~~~~~~~~~~~ 606 (707)
........||+.|+|||++.+..++.++|||||||++|||++|+.||..... .......... ..
T Consensus 237 ----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~------~~ 306 (391)
T PHA03212 237 ----ANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIR------RS 306 (391)
T ss_pred ----ccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHH------Hh
Confidence 1122345799999999999999999999999999999999999988754321 1111111110 00
Q ss_pred cCCCCCCCh---HHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCCC
Q 005227 607 DGNMGSYPS---ECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLK 683 (707)
Q Consensus 607 ~~~~~~~~~---~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~ 683 (707)
......++. .....+..-...+....|..||....+.. ......++|.+||++||++||||+|+|+
T Consensus 307 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~l~~Li~~mL~~dP~~Rpta~elL~ 375 (391)
T PHA03212 307 GTHPNEFPIDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYE-----------LPIDLEYLICKMLAFDAHHRPSAEALLD 375 (391)
T ss_pred cCChhhcCcchhHHHHHHHHHHHhccCCCCCCCCCHHHHhh-----------hhhhHHHHHHHHhcCChhhCCCHHHHhc
Confidence 000111121 11222222233445566777777655432 1223457999999999999999999999
Q ss_pred CCCCCCC
Q 005227 684 HPYVSSD 690 (707)
Q Consensus 684 Hp~f~~~ 690 (707)
||||..-
T Consensus 376 hp~f~~~ 382 (391)
T PHA03212 376 FAAFQDI 382 (391)
T ss_pred ChhhccC
Confidence 9999763
No 33
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4.8e-42 Score=351.33 Aligned_cols=203 Identities=31% Similarity=0.498 Sum_probs=173.3
Q ss_pred cCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHccCCCcceeEEEEEEeCC--eEEEEEe
Q 005227 375 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG--EQMLVYE 451 (707)
Q Consensus 375 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~--~~~lV~E 451 (707)
.++...+.||+|+||+||++... +|+..|||..........+.+.+|+.+|++++|||||+++|...... .+++.||
T Consensus 17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mE 96 (313)
T KOG0198|consen 17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFME 96 (313)
T ss_pred chhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeee
Confidence 35667889999999999999965 59999999987654333567899999999999999999999854444 6899999
Q ss_pred cCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcC-CCcEEEeeecccccCCCCC
Q 005227 452 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDH-KFTAKVADFGLSRLAPVPD 530 (707)
Q Consensus 452 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~-~~~~kl~DFGla~~~~~~~ 530 (707)
|+++|+|.+++.+.+. .+++..++.++.||++||+|||+++ ||||||||+|||++. ++.+||+|||+++......
T Consensus 97 y~~~GsL~~~~~~~g~-~l~E~~v~~ytr~iL~GL~ylHs~g---~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~ 172 (313)
T KOG0198|consen 97 YAPGGSLSDLIKRYGG-KLPEPLVRRYTRQILEGLAYLHSKG---IVHCDIKPANILLDPSNGDVKLADFGLAKKLESKG 172 (313)
T ss_pred ccCCCcHHHHHHHcCC-CCCHHHHHHHHHHHHHHHHHHHhCC---EeccCcccceEEEeCCCCeEEeccCcccccccccc
Confidence 9999999999988766 7999999999999999999999999 999999999999999 7999999999998765311
Q ss_pred CCCccccceecccccCCCccchhhhccC-CCCCchhhHHHHHHHHHHHcCCCCCCC
Q 005227 531 IEGIVPAHVSTVVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVFLELLTGMQPISH 585 (707)
Q Consensus 531 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~sDVwSlGvll~elltG~~pf~~ 585 (707)
..........||+.|||||++..+ ....++|||||||++.||+||+.||..
T Consensus 173 ----~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~ 224 (313)
T KOG0198|consen 173 ----TKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSE 224 (313)
T ss_pred ----ccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchh
Confidence 012233457899999999999953 344599999999999999999999864
No 34
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.6e-42 Score=366.27 Aligned_cols=257 Identities=26% Similarity=0.383 Sum_probs=214.6
Q ss_pred CCCccceEeeeCceEEEEEEe-CCCcEEEEEEeccCChh---hHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEe
Q 005227 376 NFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQ---GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 451 (707)
Q Consensus 376 ~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~---~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E 451 (707)
-|...+.||.|+.|.|-.|++ .+|+.+|||++...... ....+.+|+-+|+.+.|||++++|+++++..++|+|.|
T Consensus 13 pwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvlE 92 (786)
T KOG0588|consen 13 PWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVLE 92 (786)
T ss_pred ceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEEE
Confidence 466688999999999999995 58999999999865321 23568899999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCC
Q 005227 452 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 531 (707)
Q Consensus 452 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 531 (707)
|+++|.|.+++.+++ ++.+.+..++++||+.|+.|+|..+ |+|||+||+|+|+|..+++||+|||+|.+..+
T Consensus 93 yv~gGELFdylv~kG--~l~e~eaa~ff~QIi~gv~yCH~~~---icHRDLKpENlLLd~~~nIKIADFGMAsLe~~--- 164 (786)
T KOG0588|consen 93 YVPGGELFDYLVRKG--PLPEREAAHFFRQILDGVSYCHAFN---ICHRDLKPENLLLDVKNNIKIADFGMASLEVP--- 164 (786)
T ss_pred ecCCchhHHHHHhhC--CCCCHHHHHHHHHHHHHHHHHhhhc---ceeccCCchhhhhhcccCEeeeccceeecccC---
Confidence 999999999997655 5899999999999999999999999 99999999999999999999999999987543
Q ss_pred CCccccceecccccCCCccchhhhccCCCC-CchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCCC
Q 005227 532 EGIVPAHVSTVVKGTPGYLDPEYFLTHKLT-DKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 610 (707)
Q Consensus 532 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s-~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 610 (707)
.......+|++.|.|||+++|.+|. .++||||.|||||.|+||+.||+++ +....+.. .+
T Consensus 165 -----gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDd-Nir~LLlK-V~------------ 225 (786)
T KOG0588|consen 165 -----GKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDD-NIRVLLLK-VQ------------ 225 (786)
T ss_pred -----CccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCc-cHHHHHHH-HH------------
Confidence 3345667899999999999999886 5799999999999999999999743 22111110 00
Q ss_pred CCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCCCCCCCCCC
Q 005227 611 GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSSD 690 (707)
Q Consensus 611 ~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f~~~ 690 (707)
...+.+......++.|||++||++||++|+|.+|+++|||+.+.
T Consensus 226 ------------------------------------~G~f~MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP~l~g~ 269 (786)
T KOG0588|consen 226 ------------------------------------RGVFEMPSNISSEAQDLLRRMLDVDPSTRITTEEILKHPFLSGY 269 (786)
T ss_pred ------------------------------------cCcccCCCcCCHHHHHHHHHHhccCccccccHHHHhhCchhhcC
Confidence 01122223345566689999999999999999999999999887
Q ss_pred CCCCC
Q 005227 691 VSGSN 695 (707)
Q Consensus 691 ~~~~~ 695 (707)
.....
T Consensus 270 ~~~~~ 274 (786)
T KOG0588|consen 270 TSLPS 274 (786)
T ss_pred CCCCh
Confidence 76433
No 35
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.7e-42 Score=366.83 Aligned_cols=205 Identities=25% Similarity=0.434 Sum_probs=179.3
Q ss_pred HHHhcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCChhh---HHHHHHHHHHHHcc-CCCcceeEEEEEEeCCe
Q 005227 371 ALATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQG---EKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGE 445 (707)
Q Consensus 371 ~~~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~---~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~ 445 (707)
....++|....+||+|.||+|+++..+ +++.+|||.+++...-. .+..+.|.+++... +||.+++++.+|+..++
T Consensus 364 ~~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~ 443 (694)
T KOG0694|consen 364 PLTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEH 443 (694)
T ss_pred cccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCe
Confidence 445678999999999999999999976 68899999998765432 34567788888777 59999999999999999
Q ss_pred EEEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeeccccc
Q 005227 446 QMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRL 525 (707)
Q Consensus 446 ~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~ 525 (707)
.++||||+.||++..+. ....+++..++.+|..|+.||+|||+++ ||+||||.+|||+|.+|.+||+|||+++.
T Consensus 444 l~fvmey~~Ggdm~~~~---~~~~F~e~rarfyaAev~l~L~fLH~~~---IIYRDlKLdNiLLD~eGh~kiADFGlcKe 517 (694)
T KOG0694|consen 444 LFFVMEYVAGGDLMHHI---HTDVFSEPRARFYAAEVVLGLQFLHENG---IIYRDLKLDNLLLDTEGHVKIADFGLCKE 517 (694)
T ss_pred EEEEEEecCCCcEEEEE---ecccccHHHHHHHHHHHHHHHHHHHhcC---ceeeecchhheEEcccCcEEecccccccc
Confidence 99999999999943333 3456999999999999999999999999 99999999999999999999999999985
Q ss_pred CCCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCch
Q 005227 526 APVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKN 588 (707)
Q Consensus 526 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~~~ 588 (707)
-- .......+.+||+.|||||++.+..|+.++|+|||||+||||+.|..||...++
T Consensus 518 ~m-------~~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddE 573 (694)
T KOG0694|consen 518 GM-------GQGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDE 573 (694)
T ss_pred cC-------CCCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCH
Confidence 32 224466788999999999999999999999999999999999999999975443
No 36
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-41 Score=386.52 Aligned_cols=262 Identities=32% Similarity=0.526 Sum_probs=220.1
Q ss_pred hcCCCccceEeeeCceEEEEEEeC--CCc----EEEEEEeccCC-hhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeE
Q 005227 374 TNNFNSSTQIGQGGYGKVYKGILP--DGT----VVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQ 446 (707)
Q Consensus 374 ~~~~~~~~~lG~G~fg~Vy~~~~~--~~~----~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~ 446 (707)
..+.+..+.||+|+||.||.|... +|. .||||.+.... .+...+|.+|+.+|+.++|||||+++|+|.+....
T Consensus 691 ~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~ 770 (1025)
T KOG1095|consen 691 RKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPP 770 (1025)
T ss_pred hhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCc
Confidence 345556789999999999999964 343 49999998754 44567899999999999999999999999999999
Q ss_pred EEEEecCCCCCHHHHHhhcC-----CCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeec
Q 005227 447 MLVYEFMSNGTLRDQLSAKS-----KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFG 521 (707)
Q Consensus 447 ~lV~E~~~~gsL~~~l~~~~-----~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFG 521 (707)
++++|||++|+|..+|++.. ...+.....+.++.|||+|+.||++++ +|||||.++|+||+....|||+|||
T Consensus 771 ~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~---fvHRDLAaRNCLL~~~r~VKIaDFG 847 (1025)
T KOG1095|consen 771 LILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKH---FVHRDLAARNCLLDERRVVKIADFG 847 (1025)
T ss_pred EEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCC---CcCcchhhhheeecccCcEEEcccc
Confidence 99999999999999998742 345889999999999999999999999 9999999999999999999999999
Q ss_pred ccccCCCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHhhcc
Q 005227 522 LSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSS 600 (707)
Q Consensus 522 la~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~ellt-G~~pf~~~~~~~~~~~~~~~~~ 600 (707)
+|+.....+++.... ...-...|||||.+..+.++.|+|||||||++||++| |..||....+..
T Consensus 848 lArDiy~~~yyr~~~-----~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~---------- 912 (1025)
T KOG1095|consen 848 LARDIYDKDYYRKHG-----EAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFE---------- 912 (1025)
T ss_pred hhHhhhhchheeccC-----ccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHH----------
Confidence 999655444332111 1123468999999999999999999999999999999 999997655421
Q ss_pred cchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcC
Q 005227 601 MMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMM 653 (707)
Q Consensus 601 ~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~ 653 (707)
.+..+..+.+.+.|..|++.++++|..||+.+|++||++..++..+..+.+..
T Consensus 913 v~~~~~~ggRL~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~~ 965 (1025)
T KOG1095|consen 913 VLLDVLEGGRLDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNAA 965 (1025)
T ss_pred HHHHHHhCCccCCCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhhhh
Confidence 12223344467789999999999999999999999999999999888776643
No 37
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=3.4e-41 Score=355.26 Aligned_cols=286 Identities=22% Similarity=0.330 Sum_probs=209.5
Q ss_pred hcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCChh-hHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEe
Q 005227 374 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ-GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 451 (707)
Q Consensus 374 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~-~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E 451 (707)
.++|++.+.||+|+||+||+|... +++.||||++...... ....+.+|+++++.++||||+++++++.+....++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 83 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFE 83 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEE
Confidence 468999999999999999999975 7899999998754322 23467889999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCC
Q 005227 452 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 531 (707)
Q Consensus 452 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 531 (707)
|++ ++|.+++... ...+++..+..++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||+++......
T Consensus 84 ~~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~- 157 (303)
T cd07869 84 YVH-TDLCQYMDKH-PGGLHPENVKLFLFQLLRGLSYIHQRY---ILHRDLKPQNLLISDTGELKLADFGLARAKSVPS- 157 (303)
T ss_pred CCC-cCHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEECCCCcceeccCCC-
Confidence 995 6888888654 345888999999999999999999999 9999999999999999999999999987543211
Q ss_pred CCccccceecccccCCCccchhhhcc-CCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCCC
Q 005227 532 EGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 610 (707)
Q Consensus 532 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 610 (707)
.......|++.|+|||++.+ ..++.++||||+||++|||++|+.||....+............ .
T Consensus 158 ------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~------~--- 222 (303)
T cd07869 158 ------HTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVL------G--- 222 (303)
T ss_pred ------ccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHh------C---
Confidence 12233467899999999876 4688899999999999999999999976544333322211100 0
Q ss_pred CCCChHHHHHHHHHHHHhcccCCC--CCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCCCCCCCC
Q 005227 611 GSYPSECVEKFIKLALKCCQDETD--ARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVS 688 (707)
Q Consensus 611 ~~~~~~~~~~l~~l~~~c~~~~p~--~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f~ 688 (707)
....+....... +-...|+ ...+...+.+. +.. ....+.+.||+.+||+.||++|+|++|+|+||||.
T Consensus 223 -~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~----~~~-~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h~~f~ 292 (303)
T cd07869 223 -TPNEDTWPGVHS----LPHFKPERFTLYSPKNLRQA----WNK-LSYVNHAEDLASKLLQCFPKNRLSAQAALSHEYFS 292 (303)
T ss_pred -CCChhhccchhh----ccccccccccccCCccHHHH----hhc-cCCChHHHHHHHHHhccCchhccCHHHHhcCcccc
Confidence 000000000000 0000000 00011111111 111 11234566899999999999999999999999997
Q ss_pred CC
Q 005227 689 SD 690 (707)
Q Consensus 689 ~~ 690 (707)
.-
T Consensus 293 ~~ 294 (303)
T cd07869 293 DL 294 (303)
T ss_pred cC
Confidence 64
No 38
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=5.4e-41 Score=359.45 Aligned_cols=263 Identities=27% Similarity=0.455 Sum_probs=209.5
Q ss_pred HHhcCCCccceEeeeCceEEEEEEe------CCCcEEEEEEeccCCh-hhHHHHHHHHHHHHcc-CCCcceeEEEEEEeC
Q 005227 372 LATNNFNSSTQIGQGGYGKVYKGIL------PDGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEE 443 (707)
Q Consensus 372 ~~~~~~~~~~~lG~G~fg~Vy~~~~------~~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~ 443 (707)
...++|++.++||+|+||.||+|.+ .+++.||||++..... ...+.+.+|+.+++.+ +||||++++++|...
T Consensus 4 ~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~ 83 (338)
T cd05102 4 FPRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKP 83 (338)
T ss_pred cchhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCC
Confidence 3457899999999999999999974 2357899999875432 2346789999999999 899999999998764
Q ss_pred C-eEEEEEecCCCCCHHHHHhhcC--------------------------------------------------------
Q 005227 444 G-EQMLVYEFMSNGTLRDQLSAKS-------------------------------------------------------- 466 (707)
Q Consensus 444 ~-~~~lV~E~~~~gsL~~~l~~~~-------------------------------------------------------- 466 (707)
+ ..++||||+++|+|.+++....
T Consensus 84 ~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (338)
T cd05102 84 NGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQET 163 (338)
T ss_pred CCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhc
Confidence 4 5899999999999999997532
Q ss_pred ----CCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCCCccccceecc
Q 005227 467 ----KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTV 542 (707)
Q Consensus 467 ----~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~ 542 (707)
..++++..+..++.||++||+|||+.+ |+||||||+|||++.++.+||+|||+++....... ......
T Consensus 164 ~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~-----~~~~~~ 235 (338)
T cd05102 164 DDLWKSPLTMEDLICYSFQVARGMEFLASRK---CIHRDLAARNILLSENNVVKICDFGLARDIYKDPD-----YVRKGS 235 (338)
T ss_pred cccccCCCCHHHHHHHHHHHHHHHHHHHHCC---EECCCCccceEEEcCCCcEEEeecccccccccCcc-----hhcccC
Confidence 134788899999999999999999998 99999999999999999999999999986532210 011123
Q ss_pred cccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHhhcccchhhccCCCCCCChHHHHHH
Q 005227 543 VKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKF 621 (707)
Q Consensus 543 ~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 621 (707)
..++..|+|||++.+..++.++|||||||++|||++ |..||........... . +..+.....+..++..+
T Consensus 236 ~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~-~--------~~~~~~~~~~~~~~~~l 306 (338)
T cd05102 236 ARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQ-R--------LKDGTRMRAPENATPEI 306 (338)
T ss_pred CCCCccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHH-H--------HhcCCCCCCCCCCCHHH
Confidence 345688999999999999999999999999999997 9999965332111111 1 11222223455667789
Q ss_pred HHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 005227 622 IKLALKCCQDETDARPSMSEVMRELESIWN 651 (707)
Q Consensus 622 ~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~ 651 (707)
.+++.+||+.+|++||++.++++.|+.+..
T Consensus 307 ~~li~~cl~~dp~~RPs~~el~~~l~~~~~ 336 (338)
T cd05102 307 YRIMLACWQGDPKERPTFSALVEILGDLLQ 336 (338)
T ss_pred HHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 999999999999999999999999997654
No 39
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=3.7e-41 Score=352.49 Aligned_cols=278 Identities=24% Similarity=0.357 Sum_probs=206.5
Q ss_pred cCCCccceEeeeCceEEEEEEeC--CCcEEEEEEeccCChh--hHHHHHHHHHHHHcc---CCCcceeEEEEEEe-----
Q 005227 375 NNFNSSTQIGQGGYGKVYKGILP--DGTVVAVKRAQEGSLQ--GEKEFLTEIQFLSRL---HHRNLVSLVGYCDE----- 442 (707)
Q Consensus 375 ~~~~~~~~lG~G~fg~Vy~~~~~--~~~~vavK~l~~~~~~--~~~~~~~E~~~l~~l---~h~nIv~l~~~~~~----- 442 (707)
++|++.+.||+|+||+||+|... +++.||+|++...... ....+.+|+.+++.+ +||||++++++|..
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~ 80 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 80 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence 47889999999999999999863 4788999988653322 234566777777765 69999999999852
Q ss_pred CCeEEEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecc
Q 005227 443 EGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGL 522 (707)
Q Consensus 443 ~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGl 522 (707)
....++||||++ ++|.+++.......+++..++.++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||+
T Consensus 81 ~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~---iiH~dlkp~Nil~~~~~~~kl~Dfg~ 156 (290)
T cd07862 81 ETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGL 156 (290)
T ss_pred CCcEEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEEcCCCCEEEccccc
Confidence 356899999995 69999997766667899999999999999999999998 99999999999999999999999999
Q ss_pred cccCCCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccc
Q 005227 523 SRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMM 602 (707)
Q Consensus 523 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~ 602 (707)
++..... .......|+..|+|||++.+..++.++|||||||++|||++|+.||....+... .....
T Consensus 157 ~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~-~~~i~----- 222 (290)
T cd07862 157 ARIYSFQ--------MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQ-LGKIL----- 222 (290)
T ss_pred eEeccCC--------cccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHH-HHHHH-----
Confidence 9765322 122345689999999999999999999999999999999999999976543221 11111
Q ss_pred hhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCC
Q 005227 603 FSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSML 682 (707)
Q Consensus 603 ~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L 682 (707)
+......+.+++.. ..+...++...+. .... ...+..+....+++.+||+.||++|||+.|+|
T Consensus 223 ----~~~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~~----------~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l 285 (290)
T cd07862 223 ----DVIGLPGEEDWPRD-VALPRQAFHSKSA--QPIE----------KFVTDIDELGKDLLLKCLTFNPAKRISAYSAL 285 (290)
T ss_pred ----HHhCCCChhhchhh-hcccchhccCCCC--CCHH----------HHccCCCHHHHHHHHHHhccCchhcCCHHHHh
Confidence 00000111111111 1111222222211 1111 12234455667899999999999999999999
Q ss_pred CCCCC
Q 005227 683 KHPYV 687 (707)
Q Consensus 683 ~Hp~f 687 (707)
+||||
T Consensus 286 ~hp~f 290 (290)
T cd07862 286 SHPYF 290 (290)
T ss_pred cCCCC
Confidence 99998
No 40
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-43 Score=332.69 Aligned_cols=259 Identities=23% Similarity=0.376 Sum_probs=211.0
Q ss_pred HhcCCCccceEeeeCceEEEEEEe-CCCcEEEEEEeccCC--hhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEE
Q 005227 373 ATNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 449 (707)
Q Consensus 373 ~~~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV 449 (707)
.+++|++.+.||+|.|+.||++.. ++|+.+|+|++.... ..+.+++.+|+++-+.++||||+++.+.+.+.+..|+|
T Consensus 9 f~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylv 88 (355)
T KOG0033|consen 9 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 88 (355)
T ss_pred cchhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEE
Confidence 356788889999999999999985 489999999876432 23457889999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEc---CCCcEEEeeecccccC
Q 005227 450 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLD---HKFTAKVADFGLSRLA 526 (707)
Q Consensus 450 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~---~~~~~kl~DFGla~~~ 526 (707)
+|+|+|++|..-+-.+ ..+++..+-..++||+++|.|+|.++ |||||+||.|+++- ...-+|++|||+|...
T Consensus 89 Fe~m~G~dl~~eIV~R--~~ySEa~aSH~~rQiLeal~yCH~n~---IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l 163 (355)
T KOG0033|consen 89 FDLVTGGELFEDIVAR--EFYSEADASHCIQQILEALAYCHSNG---IVHRDLKPENLLLASKAKGAAVKLADFGLAIEV 163 (355)
T ss_pred EecccchHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHhcC---ceeccCChhheeeeeccCCCceeecccceEEEe
Confidence 9999999997766443 44788889999999999999999999 99999999999995 3456999999999877
Q ss_pred CCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhc
Q 005227 527 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVI 606 (707)
Q Consensus 527 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~ 606 (707)
.. ........||++|||||++...+|+..+|||+-||+||-|+.|+.||...... +.
T Consensus 164 ~~--------g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~-rl-------------- 220 (355)
T KOG0033|consen 164 ND--------GEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH-RL-------------- 220 (355)
T ss_pred CC--------ccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHH-HH--------------
Confidence 52 23445678999999999999999999999999999999999999999753321 11
Q ss_pred cCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCCCCCC
Q 005227 607 DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPY 686 (707)
Q Consensus 607 ~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hp~ 686 (707)
+.+++..-...++.+ .+...+++.+++++||+.||.+|+||.|||+|||
T Consensus 221 --------------ye~I~~g~yd~~~~~-----------------w~~is~~Ak~LvrrML~~dP~kRIta~EAL~HpW 269 (355)
T KOG0033|consen 221 --------------YEQIKAGAYDYPSPE-----------------WDTVTPEAKSLIRRMLTVNPKKRITADEALKHPW 269 (355)
T ss_pred --------------HHHHhccccCCCCcc-----------------cCcCCHHHHHHHHHHhccChhhhccHHHHhCCch
Confidence 111222222222222 2334455668999999999999999999999999
Q ss_pred CCCC
Q 005227 687 VSSD 690 (707)
Q Consensus 687 f~~~ 690 (707)
++..
T Consensus 270 i~~r 273 (355)
T KOG0033|consen 270 ICNR 273 (355)
T ss_pred hcch
Confidence 9753
No 41
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=3.8e-41 Score=351.90 Aligned_cols=284 Identities=22% Similarity=0.290 Sum_probs=209.3
Q ss_pred cCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCCh--hhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEe
Q 005227 375 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 451 (707)
Q Consensus 375 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E 451 (707)
++|++.+.||+|+||+||+|+.+ +++.||+|++..... ...+.+.+|+++++.++|+||+++++++...+..++|||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFE 80 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEe
Confidence 47899999999999999999975 688999999875322 234578899999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCC
Q 005227 452 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 531 (707)
Q Consensus 452 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 531 (707)
|++++.+..+... ...+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 81 ~~~~~~l~~~~~~--~~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~- 154 (287)
T cd07848 81 YVEKNMLELLEEM--PNGVPPEKVRSYIYQLIKAIHWCHKND---IVHRDIKPENLLISHNDVLKLCDFGFARNLSEGS- 154 (287)
T ss_pred cCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCcEEEeeccCcccccccc-
Confidence 9998776655432 345899999999999999999999998 9999999999999999999999999998654321
Q ss_pred CCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCCCC
Q 005227 532 EGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 611 (707)
Q Consensus 532 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 611 (707)
........|+..|+|||++.+..++.++|||||||++|||++|+.||............. ...+
T Consensus 155 -----~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~-----------~~~~ 218 (287)
T cd07848 155 -----NANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQ-----------KVLG 218 (287)
T ss_pred -----cccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHH-----------HhhC
Confidence 111223468999999999999899999999999999999999999997544322111110 0111
Q ss_pred CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCCCCCCC
Q 005227 612 SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYV 687 (707)
Q Consensus 612 ~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f 687 (707)
..+.+....+.. .-.......|....... .+ .......+..+.||+.+||+.||++|+|++|+|+||||
T Consensus 219 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~-~~--~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~hp~f 287 (287)
T cd07848 219 PLPAEQMKLFYS----NPRFHGLRFPAVNHPQS-LE--RRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNHPAF 287 (287)
T ss_pred CCCHHHHHhhhc----cchhcccccCcccCccc-HH--HhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence 122222221110 00000000111000000 00 01112234567799999999999999999999999998
No 42
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=1.7e-41 Score=355.39 Aligned_cols=253 Identities=20% Similarity=0.273 Sum_probs=204.1
Q ss_pred cCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCCh---hhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEE
Q 005227 375 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 450 (707)
Q Consensus 375 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~ 450 (707)
++|++.+.||+|+||+||+|... +++.||+|++..... ...+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM 80 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence 46889999999999999999975 789999999864322 23456889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCC
Q 005227 451 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 530 (707)
Q Consensus 451 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~ 530 (707)
||+++|+|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||+++.....
T Consensus 81 e~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~- 154 (291)
T cd05612 81 EYVPGGELFSYLRNS--GRFSNSTGLFYASEIVCALEYLHSKE---IVYRDLKPENILLDKEGHIKLTDFGFAKKLRDR- 154 (291)
T ss_pred eCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHeEECCCCCEEEEecCcchhccCC-
Confidence 999999999999654 35889999999999999999999998 999999999999999999999999999765321
Q ss_pred CCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCCC
Q 005227 531 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 610 (707)
Q Consensus 531 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 610 (707)
.....|++.|+|||++.+..++.++|||||||++|||++|+.||...... ...
T Consensus 155 ---------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~-~~~----------------- 207 (291)
T cd05612 155 ---------TWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPF-GIY----------------- 207 (291)
T ss_pred ---------cccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHH-----------------
Confidence 12346899999999999999999999999999999999999999643321 100
Q ss_pred CCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCC-----CCcCCCCC
Q 005227 611 GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPS-----SSSMLKHP 685 (707)
Q Consensus 611 ~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~s-----a~e~L~Hp 685 (707)
+.+..+-..-| ...+....+++.+||..||++|++ ++|+++||
T Consensus 208 ------------~~i~~~~~~~~--------------------~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~ 255 (291)
T cd05612 208 ------------EKILAGKLEFP--------------------RHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNHR 255 (291)
T ss_pred ------------HHHHhCCcCCC--------------------ccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcCc
Confidence 00000000000 011223457888889999999985 99999999
Q ss_pred CCCCCCC
Q 005227 686 YVSSDVS 692 (707)
Q Consensus 686 ~f~~~~~ 692 (707)
||....+
T Consensus 256 ~~~~~~~ 262 (291)
T cd05612 256 WFKSVDW 262 (291)
T ss_pred cccCCCH
Confidence 9976433
No 43
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=1.7e-41 Score=361.64 Aligned_cols=197 Identities=25% Similarity=0.424 Sum_probs=174.7
Q ss_pred cCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCCh---hhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEE
Q 005227 375 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 450 (707)
Q Consensus 375 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~ 450 (707)
++|++.+.||+|+||.||+|..+ +++.||||++..... ...+.+.+|++++++++||||+++++++.+++..++||
T Consensus 18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 97 (329)
T PTZ00263 18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLL 97 (329)
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEE
Confidence 56888999999999999999975 689999999875322 22356889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCC
Q 005227 451 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 530 (707)
Q Consensus 451 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~ 530 (707)
||+++|+|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||+++.....
T Consensus 98 e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~- 171 (329)
T PTZ00263 98 EFVVGGELFTHLRKA--GRFPNDVAKFYHAELVLAFEYLHSKD---IIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDR- 171 (329)
T ss_pred cCCCCChHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHEEECCCCCEEEeeccCceEcCCC-
Confidence 999999999999754 35888999999999999999999998 999999999999999999999999999865321
Q ss_pred CCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCC
Q 005227 531 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 586 (707)
Q Consensus 531 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~ 586 (707)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 172 ---------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~ 218 (329)
T PTZ00263 172 ---------TFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDD 218 (329)
T ss_pred ---------cceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCC
Confidence 12346899999999999999999999999999999999999999643
No 44
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2.7e-41 Score=341.64 Aligned_cols=280 Identities=23% Similarity=0.315 Sum_probs=226.0
Q ss_pred hcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCChhh---HHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEE
Q 005227 374 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQG---EKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 449 (707)
Q Consensus 374 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~---~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV 449 (707)
.++|+..+.||+|.-|+||++.++ ++..+|+|++.+..... ..++..|-+||+.++||.+..||+.|+.++..|+|
T Consensus 76 l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~ 155 (459)
T KOG0610|consen 76 LRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLV 155 (459)
T ss_pred HHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEE
Confidence 345666789999999999999986 46899999998765544 34677899999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCC
Q 005227 450 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 529 (707)
Q Consensus 450 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~ 529 (707)
||||+||+|..+.+++....+++..++.++..|+.||+|||..| ||.|||||+||||-++|++.|+||.++......
T Consensus 156 meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlG---ivYRDLKPENILvredGHIMLsDFDLS~~~~~~ 232 (459)
T KOG0610|consen 156 MEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLG---IVYRDLKPENILVREDGHIMLSDFDLSLRCPVS 232 (459)
T ss_pred EecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhc---eeeccCCcceeEEecCCcEEeeeccccccCCCC
Confidence 99999999999999998889999999999999999999999999 999999999999999999999999987543210
Q ss_pred -------C-------------------------CCC-----------------ccccceecccccCCCccchhhhccCCC
Q 005227 530 -------D-------------------------IEG-----------------IVPAHVSTVVKGTPGYLDPEYFLTHKL 560 (707)
Q Consensus 530 -------~-------------------------~~~-----------------~~~~~~~~~~~gt~~y~aPE~~~~~~~ 560 (707)
. ... ..........+||-.|.|||++.+...
T Consensus 233 Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GH 312 (459)
T KOG0610|consen 233 PTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGH 312 (459)
T ss_pred CeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCC
Confidence 0 000 000122345679999999999999999
Q ss_pred CCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHH
Q 005227 561 TDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMS 640 (707)
Q Consensus 561 s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~ 640 (707)
+.++|+|+|||++|||+.|..||....+... +..++...+ .+|
T Consensus 313 gsAVDWWtfGIflYEmLyG~TPFKG~~~~~T----------l~NIv~~~l-~Fp-------------------------- 355 (459)
T KOG0610|consen 313 GSAVDWWTFGIFLYEMLYGTTPFKGSNNKET----------LRNIVGQPL-KFP-------------------------- 355 (459)
T ss_pred CchhhHHHHHHHHHHHHhCCCCcCCCCchhh----------HHHHhcCCC-cCC--------------------------
Confidence 9999999999999999999999976554221 111111100 011
Q ss_pred HHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCC----CCcCCCCCCCCCCCCCCCcccccCcccCC
Q 005227 641 EVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPS----SSSMLKHPYVSSDVSGSNLVSGVIPTITP 706 (707)
Q Consensus 641 ~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~s----a~e~L~Hp~f~~~~~~~~~~~~~~~~~~~ 706 (707)
..+.....+.|||+++|..||.+|+- |.|+.+||||.+--+. ++...+||.=|
T Consensus 356 -----------~~~~vs~~akDLIr~LLvKdP~kRlg~~rGA~eIK~HpFF~gVnWa--Lir~~~PP~iP 412 (459)
T KOG0610|consen 356 -----------EEPEVSSAAKDLIRKLLVKDPSKRLGSKRGAAEIKRHPFFEGVNWA--LIRCARPPEIP 412 (459)
T ss_pred -----------CCCcchhHHHHHHHHHhccChhhhhccccchHHhhcCccccCCChh--heeccCCCcCC
Confidence 01122245568999999999999999 9999999999999995 77777777644
No 45
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=3.2e-41 Score=358.73 Aligned_cols=194 Identities=26% Similarity=0.343 Sum_probs=169.2
Q ss_pred ceEeeeCceEEEEEEeC-CCcEEEEEEeccCCh---hhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEecCCCC
Q 005227 381 TQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNG 456 (707)
Q Consensus 381 ~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~g 456 (707)
+.||+|+||.||+|..+ +|+.||+|++..... .....+.+|++++++++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~ 80 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence 46999999999999964 789999999875322 22356788999999999999999999999999999999999999
Q ss_pred CHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCCCccc
Q 005227 457 TLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVP 536 (707)
Q Consensus 457 sL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~ 536 (707)
+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 81 ~L~~~l~~~--~~~~~~~~~~~~~qi~~~L~~lH~~~---ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~------- 148 (323)
T cd05571 81 ELFFHLSRE--RVFSEDRARFYGAEIVSALGYLHSCD---VVYRDLKLENLMLDKDGHIKITDFGLCKEGISD------- 148 (323)
T ss_pred cHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCC---eEeCCCCHHHEEECCCCCEEEeeCCCCcccccC-------
Confidence 999999654 35899999999999999999999999 999999999999999999999999998753211
Q ss_pred cceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCC
Q 005227 537 AHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 586 (707)
Q Consensus 537 ~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~ 586 (707)
........||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 149 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~ 198 (323)
T cd05571 149 GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ 198 (323)
T ss_pred CCcccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCC
Confidence 11223456999999999999999999999999999999999999999643
No 46
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=5.3e-41 Score=359.03 Aligned_cols=199 Identities=26% Similarity=0.397 Sum_probs=174.1
Q ss_pred hcCCCccceEeeeCceEEEEEEeCC--CcEEEEEEeccCC---hhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEE
Q 005227 374 TNNFNSSTQIGQGGYGKVYKGILPD--GTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 448 (707)
Q Consensus 374 ~~~~~~~~~lG~G~fg~Vy~~~~~~--~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~l 448 (707)
.++|++.+.||+|+||.||+|..++ +..||+|++.... ....+.+.+|+++++.++||||+++++++.+.+..++
T Consensus 29 ~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~l 108 (340)
T PTZ00426 29 YEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYL 108 (340)
T ss_pred hhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEE
Confidence 3568899999999999999998543 4689999886432 2234568899999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCC
Q 005227 449 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 528 (707)
Q Consensus 449 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~ 528 (707)
||||+++|+|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 109 v~Ey~~~g~L~~~i~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~ 183 (340)
T PTZ00426 109 VLEFVIGGEFFTFLRRNK--RFPNDVGCFYAAQIVLIFEYLQSLN---IVYRDLKPENLLLDKDGFIKMTDFGFAKVVDT 183 (340)
T ss_pred EEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eEccCCCHHHEEECCCCCEEEecCCCCeecCC
Confidence 999999999999997543 5899999999999999999999999 99999999999999999999999999976532
Q ss_pred CCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCc
Q 005227 529 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 587 (707)
Q Consensus 529 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~~ 587 (707)
. .....||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 184 ~----------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~ 232 (340)
T PTZ00426 184 R----------TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANE 232 (340)
T ss_pred C----------cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCC
Confidence 1 123568999999999999999999999999999999999999997543
No 47
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=7.8e-41 Score=357.01 Aligned_cols=299 Identities=23% Similarity=0.368 Sum_probs=216.7
Q ss_pred hcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCC-hhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEe
Q 005227 374 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 451 (707)
Q Consensus 374 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E 451 (707)
.++|++.+.||+|+||.||++... ++..||+|.+.... ....+.+.+|++++++++||||+++++++...+..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 83 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 83 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEee
Confidence 468999999999999999999975 68899999987543 2334679999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCC
Q 005227 452 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 531 (707)
Q Consensus 452 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 531 (707)
|+++++|.+++.... .+++..+..++.|++.||.|||+.+ .|+||||||+|||+++++.+||+|||++......
T Consensus 84 ~~~~~~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~--~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-- 157 (331)
T cd06649 84 HMDGGSLDQVLKEAK--RIPEEILGKVSIAVLRGLAYLREKH--QIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS-- 157 (331)
T ss_pred cCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHhhcC--CEEcCCCChhhEEEcCCCcEEEccCccccccccc--
Confidence 999999999996543 4889999999999999999999853 2999999999999999999999999998755321
Q ss_pred CCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCCCC
Q 005227 532 EGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 611 (707)
Q Consensus 532 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 611 (707)
......|+..|+|||++.+..++.++|||||||++|||++|+.||...... + ......... .+....
T Consensus 158 -------~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~-~-~~~~~~~~~----~~~~~~ 224 (331)
T cd06649 158 -------MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAK-E-LEAIFGRPV----VDGEEG 224 (331)
T ss_pred -------ccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHH-H-HHHHhcccc----cccccC
Confidence 122346899999999999999999999999999999999999999644321 1 111111000 000000
Q ss_pred CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCC------CCCCCCCccccCCCCCCCCCCCCCCcCCCCC
Q 005227 612 SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMP------ESDTKTPEFINSEHTSKEETPPSSSSMLKHP 685 (707)
Q Consensus 612 ~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~------~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hp 685 (707)
. +.............+.......+|++. +.+.+..+..... .....+.+|+.+||..||++|||++|+|+||
T Consensus 225 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~ 302 (331)
T cd06649 225 E-PHSISPRPRPPGRPVSGHGMDSRPAMA-IFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHT 302 (331)
T ss_pred C-ccccCcccccccccccccccccccchh-HHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcCh
Confidence 0 000000000000001112223333332 1122222222111 1223456899999999999999999999999
Q ss_pred CCCCCCCC
Q 005227 686 YVSSDVSG 693 (707)
Q Consensus 686 ~f~~~~~~ 693 (707)
||......
T Consensus 303 ~~~~~~~~ 310 (331)
T cd06649 303 FIKRSEVE 310 (331)
T ss_pred HHhhcccc
Confidence 99876554
No 48
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=6.7e-41 Score=357.67 Aligned_cols=297 Identities=22% Similarity=0.364 Sum_probs=224.0
Q ss_pred HhcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCCh-hhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEE
Q 005227 373 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 450 (707)
Q Consensus 373 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~ 450 (707)
..++|++.++||+|+||.||+|... ++..+|+|.+..... .....+.+|++++++++|+||++++++|.+.+..++||
T Consensus 3 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 82 (333)
T cd06650 3 KDDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM 82 (333)
T ss_pred chhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEE
Confidence 3478999999999999999999976 688999998875422 33467899999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhC-CCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCC
Q 005227 451 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTE-ADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 529 (707)
Q Consensus 451 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~-~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~ 529 (707)
||+++|+|.+++... ..+++..+..++.|++.||.|||+. + |+||||||+|||+++++.+||+|||++......
T Consensus 83 e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~l~~~l~~lH~~~~---ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~ 157 (333)
T cd06650 83 EHMDGGSLDQVLKKA--GRIPEQILGKVSIAVIKGLTYLREKHK---IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS 157 (333)
T ss_pred ecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhcCC---EEecCCChhhEEEcCCCCEEEeeCCcchhhhhh
Confidence 999999999999654 3488999999999999999999974 5 999999999999999999999999998754321
Q ss_pred CCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCC
Q 005227 530 DIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGN 609 (707)
Q Consensus 530 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 609 (707)
......|+..|+|||++.+..++.++|||||||++|||++|+.||...... ......... ..+.
T Consensus 158 ---------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~--~~~~~~~~~-----~~~~ 221 (333)
T cd06650 158 ---------MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAK--ELELMFGCP-----VEGD 221 (333)
T ss_pred ---------ccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchh--HHHHHhcCc-----ccCC
Confidence 112346889999999999989999999999999999999999999754321 111111000 0000
Q ss_pred CCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCC------CCCCCCccccCCCCCCCCCCCCCCcCCC
Q 005227 610 MGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPE------SDTKTPEFINSEHTSKEETPPSSSSMLK 683 (707)
Q Consensus 610 ~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~------~~~~~~dll~~~L~~dP~~R~sa~e~L~ 683 (707)
... .............|....|..||++.. .+....+....+. .+..+.+|+.+||+.||++|||++|+++
T Consensus 222 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~ 298 (333)
T cd06650 222 PAE--SETSPRPRPPGRPLSSYGPDSRPPMAI-FELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMV 298 (333)
T ss_pred ccc--cccCcccCCccchhhhhcccccccccH-HHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhh
Confidence 000 000001111223344567888887642 2222322222111 1234568999999999999999999999
Q ss_pred CCCCCCCCCC
Q 005227 684 HPYVSSDVSG 693 (707)
Q Consensus 684 Hp~f~~~~~~ 693 (707)
||||......
T Consensus 299 h~~~~~~~~~ 308 (333)
T cd06650 299 HAFIKRSEAE 308 (333)
T ss_pred CHHHhcCccc
Confidence 9999876543
No 49
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.6e-41 Score=345.06 Aligned_cols=265 Identities=28% Similarity=0.387 Sum_probs=207.3
Q ss_pred HHhcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCChh--------------hHHHHHHHHHHHHccCCCcceeE
Q 005227 372 LATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ--------------GEKEFLTEIQFLSRLHHRNLVSL 436 (707)
Q Consensus 372 ~~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~--------------~~~~~~~E~~~l~~l~h~nIv~l 436 (707)
...++|++.+.||+|.||.|-+|+.. +++.||||++.+.... ..+.+.+|+.+|++++|||||+|
T Consensus 94 k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~L 173 (576)
T KOG0585|consen 94 KQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKL 173 (576)
T ss_pred eehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEE
Confidence 34578999999999999999999954 7999999998753221 12478899999999999999999
Q ss_pred EEEEEeC--CeEEEEEecCCCCCHHHHHhhcCCCC-cCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCC
Q 005227 437 VGYCDEE--GEQMLVYEFMSNGTLRDQLSAKSKEP-LGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKF 513 (707)
Q Consensus 437 ~~~~~~~--~~~~lV~E~~~~gsL~~~l~~~~~~~-l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~ 513 (707)
+++..+. +..|||+|||..|.+...= ...+ +++.++++++.++..||+|||.++ ||||||||+|+||+++|
T Consensus 174 iEvLDDP~s~~~YlVley~s~G~v~w~p---~d~~els~~~Ar~ylrDvv~GLEYLH~Qg---iiHRDIKPsNLLl~~~g 247 (576)
T KOG0585|consen 174 IEVLDDPESDKLYLVLEYCSKGEVKWCP---PDKPELSEQQARKYLRDVVLGLEYLHYQG---IIHRDIKPSNLLLSSDG 247 (576)
T ss_pred EEeecCcccCceEEEEEeccCCccccCC---CCcccccHHHHHHHHHHHHHHHHHHHhcC---eeccccchhheEEcCCC
Confidence 9998665 5799999999988864432 2233 899999999999999999999999 99999999999999999
Q ss_pred cEEEeeecccccCCCCCCCCccccceecccccCCCccchhhhccCC----CCCchhhHHHHHHHHHHHcCCCCCCCCchh
Q 005227 514 TAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHK----LTDKSDVYSLGVVFLELLTGMQPISHGKNI 589 (707)
Q Consensus 514 ~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~s~~sDVwSlGvll~elltG~~pf~~~~~~ 589 (707)
++||+|||.+.........+. ........||+.|+|||...++. .+.+.||||+||+||.|+.|+.||......
T Consensus 248 ~VKIsDFGVs~~~~~~~~~~~--d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~ 325 (576)
T KOG0585|consen 248 TVKISDFGVSNEFPQGSDEGS--DDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFEL 325 (576)
T ss_pred cEEeeccceeeecccCCcccc--HHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHH
Confidence 999999999987754422221 22334478999999999998732 345789999999999999999999754321
Q ss_pred HHHHHHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCC
Q 005227 590 VREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHT 669 (707)
Q Consensus 590 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~ 669 (707)
.-. .++ ..+|-.-|+..++ .....|+|.+||.
T Consensus 326 ~l~-----------------------------~KI-----vn~pL~fP~~pe~--------------~e~~kDli~~lL~ 357 (576)
T KOG0585|consen 326 ELF-----------------------------DKI-----VNDPLEFPENPEI--------------NEDLKDLIKRLLE 357 (576)
T ss_pred HHH-----------------------------HHH-----hcCcccCCCcccc--------------cHHHHHHHHHHhh
Confidence 110 011 1122222333222 3334489999999
Q ss_pred CCCCCCCCCCcCCCCCCCCCCCC
Q 005227 670 SKEETPPSSSSMLKHPYVSSDVS 692 (707)
Q Consensus 670 ~dP~~R~sa~e~L~Hp~f~~~~~ 692 (707)
.||++|++..++..|||.+.+..
T Consensus 358 KdP~~Ri~l~~ik~Hpwvt~~g~ 380 (576)
T KOG0585|consen 358 KDPEQRITLPDIKLHPWVTRDGD 380 (576)
T ss_pred cChhheeehhhheecceeccCCC
Confidence 99999999999999999988755
No 50
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-40 Score=347.83 Aligned_cols=261 Identities=30% Similarity=0.416 Sum_probs=217.3
Q ss_pred hcCCCccceEeeeCceEEEEEEeCCCcEEEEEEeccCChhh-HHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEec
Q 005227 374 TNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQG-EKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 452 (707)
Q Consensus 374 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~-~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~ 452 (707)
.+...+.++||+|-||.|..+....+..||||+++...... +.+|.+|+++|.+++||||++++|+|..++.+++|+||
T Consensus 537 Rs~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~EY 616 (807)
T KOG1094|consen 537 RSRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITEY 616 (807)
T ss_pred hhheehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHHH
Confidence 45566789999999999999999888999999998765554 48999999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCC
Q 005227 453 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 532 (707)
Q Consensus 453 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 532 (707)
|++|+|.+++.++............|+.|||.||+||.+.. +|||||.++|+|+|.++++||+|||+++-+...++.
T Consensus 617 mEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~n---fVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy 693 (807)
T KOG1094|consen 617 MENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLN---FVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYY 693 (807)
T ss_pred HhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhc---hhhccccccceeecCcccEEecCcccccccccCCce
Confidence 99999999998875555566677889999999999999998 999999999999999999999999999976655533
Q ss_pred CccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc--CCCCCCCCchhHHHHHHHhhcccchhhccC--
Q 005227 533 GIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT--GMQPISHGKNIVREVNIAYQSSMMFSVIDG-- 608 (707)
Q Consensus 533 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~ellt--G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~-- 608 (707)
. ......-+++|||+|.+.-++++.+||||+||+++||+++ ...||....+..- .. ....+++.
T Consensus 694 ~-----vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~v--ve-----n~~~~~~~~~ 761 (807)
T KOG1094|consen 694 R-----VQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQV--VE-----NAGEFFRDQG 761 (807)
T ss_pred e-----eecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHH--HH-----hhhhhcCCCC
Confidence 2 2223344689999999999999999999999999999987 6788875443111 10 01111111
Q ss_pred --CCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 005227 609 --NMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 649 (707)
Q Consensus 609 --~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~ 649 (707)
.....|.-|+..+++++.+||..+..+||+++++...|++.
T Consensus 762 ~~~~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~ 804 (807)
T KOG1094|consen 762 RQVVLSRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQED 804 (807)
T ss_pred cceeccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence 12335778999999999999999999999999999888753
No 51
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-41 Score=352.24 Aligned_cols=243 Identities=29% Similarity=0.511 Sum_probs=207.9
Q ss_pred CCCccceEeeeCceEEEEEEeCCCcEEEEEEeccCChhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEecCCC
Q 005227 376 NFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSN 455 (707)
Q Consensus 376 ~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~ 455 (707)
....++-||.|+-|.||+|+++ ++.||||+++.- -..+|+-|++++|+||+.|.|+|...-.+|||||||..
T Consensus 125 ~IsELeWlGSGaQGAVF~Grl~-netVAVKKV~el-------kETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~ 196 (904)
T KOG4721|consen 125 EISELEWLGSGAQGAVFLGRLH-NETVAVKKVREL-------KETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQ 196 (904)
T ss_pred HhhhhhhhccCcccceeeeecc-CceehhHHHhhh-------hhhhHHHHHhccCcceeeEeeeecCCceeEEeeecccc
Confidence 3345678999999999999994 688999987542 13578899999999999999999999999999999999
Q ss_pred CCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCCCcc
Q 005227 456 GTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIV 535 (707)
Q Consensus 456 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 535 (707)
|-|...|+. ..++.......+..+||.||.|||.+. |||||||+-||||+.+..+||+|||-++....
T Consensus 197 GqL~~VLka--~~~itp~llv~Wsk~IA~GM~YLH~hK---IIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~------- 264 (904)
T KOG4721|consen 197 GQLYEVLKA--GRPITPSLLVDWSKGIAGGMNYLHLHK---IIHRDLKSPNILISYDDVVKISDFGTSKELSD------- 264 (904)
T ss_pred ccHHHHHhc--cCccCHHHHHHHHHHhhhhhHHHHHhh---HhhhccCCCceEeeccceEEeccccchHhhhh-------
Confidence 999999965 445888888999999999999999998 99999999999999999999999999986542
Q ss_pred ccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCCC-CCCC
Q 005227 536 PAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNM-GSYP 614 (707)
Q Consensus 536 ~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 614 (707)
.......+||..|||||++...+.++|+||||||||||||+||..||.+.+. ...++.+-...+ ...|
T Consensus 265 -~STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVds----------sAIIwGVGsNsL~LpvP 333 (904)
T KOG4721|consen 265 -KSTKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDS----------SAIIWGVGSNSLHLPVP 333 (904)
T ss_pred -hhhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccch----------heeEEeccCCcccccCc
Confidence 2234567899999999999999999999999999999999999999965332 223333333333 3478
Q ss_pred hHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 005227 615 SECVEKFIKLALKCCQDETDARPSMSEVMRELESI 649 (707)
Q Consensus 615 ~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~ 649 (707)
..|++.+.-+++.||+..|..||++++++..|+-.
T Consensus 334 stcP~GfklL~Kqcw~sKpRNRPSFrqil~HldIa 368 (904)
T KOG4721|consen 334 STCPDGFKLLLKQCWNSKPRNRPSFRQILLHLDIA 368 (904)
T ss_pred ccCchHHHHHHHHHHhcCCCCCccHHHHHHHHhhc
Confidence 89999999999999999999999999999888644
No 52
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=1.7e-40 Score=370.73 Aligned_cols=296 Identities=22% Similarity=0.294 Sum_probs=208.9
Q ss_pred HHHHHHhcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHccCC------CcceeEEEEE
Q 005227 368 GEMALATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHH------RNLVSLVGYC 440 (707)
Q Consensus 368 ~~l~~~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h------~nIv~l~~~~ 440 (707)
+++...+++|++.++||+|+||+||+|... +++.||||++.... .....+..|+++++.++| .+++++++++
T Consensus 122 ~~~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~ 200 (467)
T PTZ00284 122 EDIDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP-KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYF 200 (467)
T ss_pred CccccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch-hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEE
Confidence 344556789999999999999999999964 68899999986432 223455667777777654 4588999998
Q ss_pred EeC-CeEEEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHh-CCCCCeEecCCCCCCEEEcCCC-----
Q 005227 441 DEE-GEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHT-EADPPVFHRDIKASNILLDHKF----- 513 (707)
Q Consensus 441 ~~~-~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~ivH~Dlkp~NILl~~~~----- 513 (707)
... ++.++|||++ +++|.+++.+. ..+++..+..++.||+.||+|||+ .+ ||||||||+|||++.++
T Consensus 201 ~~~~~~~~iv~~~~-g~~l~~~l~~~--~~l~~~~~~~i~~qi~~aL~yLH~~~g---IiHrDlKP~NILl~~~~~~~~~ 274 (467)
T PTZ00284 201 QNETGHMCIVMPKY-GPCLLDWIMKH--GPFSHRHLAQIIFQTGVALDYFHTELH---LMHTDLKPENILMETSDTVVDP 274 (467)
T ss_pred EcCCceEEEEEecc-CCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhcCC---eecCCCCHHHEEEecCCccccc
Confidence 654 5789999998 77999988654 358999999999999999999998 47 99999999999998765
Q ss_pred -----------cEEEeeecccccCCCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCC
Q 005227 514 -----------TAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQP 582 (707)
Q Consensus 514 -----------~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~p 582 (707)
.+||+|||.+.... .......||+.|+|||++.+..++.++|||||||++|||++|+.|
T Consensus 275 ~~~~~~~~~~~~vkl~DfG~~~~~~----------~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~p 344 (467)
T PTZ00284 275 VTNRALPPDPCRVRICDLGGCCDER----------HSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLL 344 (467)
T ss_pred ccccccCCCCceEEECCCCccccCc----------cccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCC
Confidence 49999999876432 122345789999999999999999999999999999999999999
Q ss_pred CCCCchhHHHHHHHhhcccchhhccCCCCCCChHHHHH-----HHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCC
Q 005227 583 ISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEK-----FIKLALKCCQDETDARPSMSEVMRELESIWNMMPESD 657 (707)
Q Consensus 583 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~ 657 (707)
|...... +.+... ...++.+|.+.... ..++....-...|...|. .+.+............+
T Consensus 345 f~~~~~~-~~~~~i----------~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 411 (467)
T PTZ00284 345 YDTHDNL-EHLHLM----------EKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPK--HLARIARARPVREVIRD 411 (467)
T ss_pred CCCCChH-HHHHHH----------HHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHH--HHHhhhcccchhhhhch
Confidence 9755432 211111 11112223222111 111111111111111111 11111100000001123
Q ss_pred CCCCccccCCCCCCCCCCCCCCcCCCCCCCCCCCCC
Q 005227 658 TKTPEFINSEHTSKEETPPSSSSMLKHPYVSSDVSG 693 (707)
Q Consensus 658 ~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f~~~~~~ 693 (707)
+.+.|||.+||++||++|+||+|+|+||||......
T Consensus 412 ~~~~dli~~mL~~dP~~R~ta~e~L~Hp~~~~~~~~ 447 (467)
T PTZ00284 412 DLLCDLIYGLLHYDRQKRLNARQMTTHPYVLKYYPE 447 (467)
T ss_pred HHHHHHHHHhCCcChhhCCCHHHHhcCccccccCCc
Confidence 456799999999999999999999999999875553
No 53
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=2.4e-40 Score=359.11 Aligned_cols=285 Identities=24% Similarity=0.373 Sum_probs=215.1
Q ss_pred CCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccC--ChhhHHHHHHHHHHHHccCCCcceeEEEEEEeCC-----eEE
Q 005227 376 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEG--SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG-----EQM 447 (707)
Q Consensus 376 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~-----~~~ 447 (707)
+|+..+.||+|+||+||+|... +++.||||++... .....+.+.+|+++++.++|+||+++++++...+ ..+
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 80 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY 80 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence 4788999999999999999964 7899999998653 2234467889999999999999999999998776 789
Q ss_pred EEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCC
Q 005227 448 LVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAP 527 (707)
Q Consensus 448 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~ 527 (707)
+||||+. ++|.+++.. ...+++..++.++.||+.||+|||+.+ |+||||||+|||+++++.+||+|||+++...
T Consensus 81 lv~e~~~-~~l~~~~~~--~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~ 154 (372)
T cd07853 81 VVTELMQ-SDLHKIIVS--PQPLSSDHVKVFLYQILRGLKYLHSAG---ILHRDIKPGNLLVNSNCVLKICDFGLARVEE 154 (372)
T ss_pred EEeeccc-cCHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChHHEEECCCCCEEeccccceeecc
Confidence 9999996 688888754 345899999999999999999999998 9999999999999999999999999998653
Q ss_pred CCCCCCccccceecccccCCCccchhhhccC-CCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhc
Q 005227 528 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVI 606 (707)
Q Consensus 528 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~ 606 (707)
... ........++..|+|||++.+. .++.++|||||||++|||++|+.||...... +.......
T Consensus 155 ~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-~~~~~i~~-------- 219 (372)
T cd07853 155 PDE------SKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPI-QQLDLITD-------- 219 (372)
T ss_pred cCc------cccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHH-HHHHHHHH--------
Confidence 321 1112234578899999999874 5789999999999999999999999754432 22221111
Q ss_pred cCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCCCCCC
Q 005227 607 DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPY 686 (707)
Q Consensus 607 ~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hp~ 686 (707)
..+..+.+......+-....+...+...|....+. ......+....+||.+||..||++|+|++|+|+|||
T Consensus 220 --~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~ 290 (372)
T cd07853 220 --LLGTPSLEAMRSACEGARAHILRGPHKPPSLPVLY-------TLSSQATHEAVHLLCRMLVFDPDKRISAADALAHPY 290 (372)
T ss_pred --HcCCCCHHHHHHhhHHHHHHHHhCCCCCCchHHhc-------ccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcCHh
Confidence 11111222222222222333334444445433221 122333556678999999999999999999999999
Q ss_pred CCCC
Q 005227 687 VSSD 690 (707)
Q Consensus 687 f~~~ 690 (707)
|.+.
T Consensus 291 ~~~~ 294 (372)
T cd07853 291 LDEG 294 (372)
T ss_pred hCCC
Confidence 9873
No 54
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=1.9e-40 Score=351.07 Aligned_cols=192 Identities=29% Similarity=0.405 Sum_probs=168.1
Q ss_pred EeeeCceEEEEEEeC-CCcEEEEEEeccCC---hhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEecCCCCCH
Q 005227 383 IGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTL 458 (707)
Q Consensus 383 lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL 458 (707)
||+|+||+||+|... +++.||+|++.... ......+.+|++++++++||||+++++++...+..++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 699999999999975 68899999986432 22345678899999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCCCccccc
Q 005227 459 RDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAH 538 (707)
Q Consensus 459 ~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~ 538 (707)
.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++...... .
T Consensus 81 ~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~---i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~-------~ 148 (312)
T cd05585 81 FHHLQRE--GRFDLSRARFYTAELLCALENLHKFN---VIYRDLKPENILLDYQGHIALCDFGLCKLNMKDD-------D 148 (312)
T ss_pred HHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCC---eEeCCCCHHHeEECCCCcEEEEECcccccCccCC-------C
Confidence 9999654 35899999999999999999999998 9999999999999999999999999997542211 1
Q ss_pred eecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCC
Q 005227 539 VSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 586 (707)
Q Consensus 539 ~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~ 586 (707)
......||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 149 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~ 196 (312)
T cd05585 149 KTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDE 196 (312)
T ss_pred ccccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCC
Confidence 223456899999999999999999999999999999999999999643
No 55
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-40 Score=355.50 Aligned_cols=267 Identities=31% Similarity=0.495 Sum_probs=219.8
Q ss_pred HHHHHHhcCCCccceEeeeCceEEEEEEeC--CC--cE-EEEEEeccC---ChhhHHHHHHHHHHHHccCCCcceeEEEE
Q 005227 368 GEMALATNNFNSSTQIGQGGYGKVYKGILP--DG--TV-VAVKRAQEG---SLQGEKEFLTEIQFLSRLHHRNLVSLVGY 439 (707)
Q Consensus 368 ~~l~~~~~~~~~~~~lG~G~fg~Vy~~~~~--~~--~~-vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~nIv~l~~~ 439 (707)
+.++..-++....++||+|+||.||+|.++ ++ .. ||||..+.. .....++|.+|+++|++++|||||++||+
T Consensus 150 ~~Wel~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGV 229 (474)
T KOG0194|consen 150 QKWELSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGV 229 (474)
T ss_pred cccEEeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEE
Confidence 344555555666799999999999999964 33 23 899998852 24456789999999999999999999999
Q ss_pred EEeCCeEEEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEee
Q 005227 440 CDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVAD 519 (707)
Q Consensus 440 ~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~D 519 (707)
+..+..+++|||+|.||+|.++|+.... .++..++..++.+.|+||+|||+++ +|||||.++|+|++.++.+||+|
T Consensus 230 a~~~~Pl~ivmEl~~gGsL~~~L~k~~~-~v~~~ek~~~~~~AA~Gl~YLh~k~---~IHRDIAARNcL~~~~~~vKISD 305 (474)
T KOG0194|consen 230 AVLEEPLMLVMELCNGGSLDDYLKKNKK-SLPTLEKLRFCYDAARGLEYLHSKN---CIHRDIAARNCLYSKKGVVKISD 305 (474)
T ss_pred EcCCCccEEEEEecCCCcHHHHHHhCCC-CCCHHHHHHHHHHHHhHHHHHHHCC---CcchhHhHHHheecCCCeEEeCc
Confidence 9999999999999999999999987544 6999999999999999999999999 99999999999999999999999
Q ss_pred ecccccCCCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHhh
Q 005227 520 FGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQ 598 (707)
Q Consensus 520 FGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~ellt-G~~pf~~~~~~~~~~~~~~~ 598 (707)
||+++....-. .......-+..|+|||.+....|+.++|||||||++||+++ |..||....... +.
T Consensus 306 FGLs~~~~~~~-------~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~--v~---- 372 (474)
T KOG0194|consen 306 FGLSRAGSQYV-------MKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYE--VK---- 372 (474)
T ss_pred cccccCCccee-------eccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHHH--HH----
Confidence 99987543110 11111234678999999999999999999999999999999 889997655421 11
Q ss_pred cccchhh-ccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCC
Q 005227 599 SSMMFSV-IDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPE 655 (707)
Q Consensus 599 ~~~~~~~-~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~ 655 (707)
..+ ..+.+...|...+..+..++..||..+|++||+|.++.+.++.+......
T Consensus 373 ----~kI~~~~~r~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~~~ 426 (474)
T KOG0194|consen 373 ----AKIVKNGYRMPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKKKEA 426 (474)
T ss_pred ----HHHHhcCccCCCCCCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHhcccc
Confidence 112 23444556778888999999999999999999999999999998776543
No 56
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.6e-41 Score=320.20 Aligned_cols=254 Identities=25% Similarity=0.384 Sum_probs=214.6
Q ss_pred hcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCChh---hHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEE
Q 005227 374 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ---GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 449 (707)
Q Consensus 374 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~---~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV 449 (707)
.++|++.+.||+|.||.||.|+.+ ++..||+|++.+.... -+.++.+|+++-+.++||||+++|++|.+....||+
T Consensus 21 l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLi 100 (281)
T KOG0580|consen 21 LDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLI 100 (281)
T ss_pred hhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEE
Confidence 357889999999999999999964 7889999998765433 246889999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCC
Q 005227 450 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 529 (707)
Q Consensus 450 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~ 529 (707)
+||.++|++...|.......+++.....++.|+|.||.|+|..+ |+||||||+|+|++.++..||+|||.+...+
T Consensus 101 lEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~---VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p-- 175 (281)
T KOG0580|consen 101 LEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAP-- 175 (281)
T ss_pred EEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCC---cccCCCCHHHhccCCCCCeeccCCCceeecC--
Confidence 99999999999998777778999999999999999999999998 9999999999999999999999999987543
Q ss_pred CCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCC
Q 005227 530 DIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGN 609 (707)
Q Consensus 530 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 609 (707)
.......+||..|.+||...+..++..+|+|++|++.||++.|.+||.....
T Consensus 176 -------~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~--------------------- 227 (281)
T KOG0580|consen 176 -------SNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSH--------------------- 227 (281)
T ss_pred -------CCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhh---------------------
Confidence 2345678999999999999999999999999999999999999999963221
Q ss_pred CCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCCCCCCCCC
Q 005227 610 MGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSS 689 (707)
Q Consensus 610 ~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f~~ 689 (707)
.+.++-+.++=-..| +..+..+.|+|.++|..+|.+|.+-.|++.|||+-.
T Consensus 228 ---------~etYkrI~k~~~~~p--------------------~~is~~a~dlI~~ll~~~p~~r~~l~~v~~hpwI~a 278 (281)
T KOG0580|consen 228 ---------SETYKRIRKVDLKFP--------------------STISGGAADLISRLLVKNPIERLALTEVMDHPWIVA 278 (281)
T ss_pred ---------HHHHHHHHHccccCC--------------------cccChhHHHHHHHHhccCccccccHHHHhhhHHHHh
Confidence 111222222211122 223445568899999999999999999999999753
No 57
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=4.2e-40 Score=352.41 Aligned_cols=284 Identities=24% Similarity=0.377 Sum_probs=209.2
Q ss_pred CCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccC--ChhhHHHHHHHHHHHHccCCCcceeEEEEEEeC-----CeEE
Q 005227 376 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEG--SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE-----GEQM 447 (707)
Q Consensus 376 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~-----~~~~ 447 (707)
+|++.+.||+|+||.||+|+.. +++.||||++... .......+.+|++++++++||||+++++++... ...+
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 80 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY 80 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence 5888999999999999999965 7899999998743 223345788999999999999999999988543 2579
Q ss_pred EEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCC
Q 005227 448 LVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAP 527 (707)
Q Consensus 448 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~ 527 (707)
+||||++ ++|.+++... ..+++..+..++.||++||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 81 lv~e~~~-~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~ 154 (338)
T cd07859 81 VVFELME-SDLHQVIKAN--DDLTPEHHQFFLYQLLRALKYIHTAN---VFHRDLKPKNILANADCKLKICDFGLARVAF 154 (338)
T ss_pred EEEecCC-CCHHHHHHhc--ccCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCcEEEccCccccccc
Confidence 9999995 6999988654 35899999999999999999999998 9999999999999999999999999997643
Q ss_pred CCCCCCccccceecccccCCCccchhhhcc--CCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhh
Q 005227 528 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLT--HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSV 605 (707)
Q Consensus 528 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~ 605 (707)
..... ........||..|+|||++.+ ..++.++|||||||++|||++|+.||...... ....... ..
T Consensus 155 ~~~~~----~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~-~~~~~~~------~~ 223 (338)
T cd07859 155 NDTPT----AIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVV-HQLDLIT------DL 223 (338)
T ss_pred cccCc----cccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChH-HHHHHHH------HH
Confidence 22110 111234568999999999876 67899999999999999999999999654331 1111110 00
Q ss_pred ccCCCCCCChHHHHHHH-----HHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCc
Q 005227 606 IDGNMGSYPSECVEKFI-----KLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSS 680 (707)
Q Consensus 606 ~~~~~~~~~~~~~~~l~-----~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e 680 (707)
.+..+.+....+. +....+.. ..|.. ....++..++...+++.+||..||++|||++|
T Consensus 224 ----~~~~~~~~~~~i~~~~~~~~~~~~~~----~~~~~---------~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e 286 (338)
T cd07859 224 ----LGTPSPETISRVRNEKARRYLSSMRK----KQPVP---------FSQKFPNADPLALRLLERLLAFDPKDRPTAEE 286 (338)
T ss_pred ----hCCCCHHHHHHhhhhhHHHHHHhhcc----cCCCc---------hHHhcCCCChHHHHHHHHHcCcCcccCCCHHH
Confidence 1111222211111 11111111 11110 01123444556678999999999999999999
Q ss_pred CCCCCCCCCCCCC
Q 005227 681 MLKHPYVSSDVSG 693 (707)
Q Consensus 681 ~L~Hp~f~~~~~~ 693 (707)
+|+||||.+....
T Consensus 287 ~l~hp~f~~~~~~ 299 (338)
T cd07859 287 ALADPYFKGLAKV 299 (338)
T ss_pred HhcCchhhhcCcc
Confidence 9999999775553
No 58
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.3e-41 Score=325.21 Aligned_cols=257 Identities=25% Similarity=0.375 Sum_probs=207.6
Q ss_pred hcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCCh----hh----HHHHHHHHHHHHcc-CCCcceeEEEEEEeC
Q 005227 374 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL----QG----EKEFLTEIQFLSRL-HHRNLVSLVGYCDEE 443 (707)
Q Consensus 374 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~----~~----~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~ 443 (707)
-+.|...+.||+|..++|-++..+ +|..+|+|++..... +. .+.-.+|+.+|+++ .||+|+.+.++|+.+
T Consensus 16 y~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~ 95 (411)
T KOG0599|consen 16 YAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESD 95 (411)
T ss_pred HhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCc
Confidence 356778899999999999999865 788999998764221 11 23456799999998 799999999999999
Q ss_pred CeEEEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeeccc
Q 005227 444 GEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLS 523 (707)
Q Consensus 444 ~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla 523 (707)
...++|+|.|+.|.|.|+|.. .-.++++..+.|+.|+..|++|||... ||||||||+|||+|++.++||+|||.|
T Consensus 96 sF~FlVFdl~prGELFDyLts--~VtlSEK~tR~iMrqlfegVeylHa~~---IVHRDLKpENILlddn~~i~isDFGFa 170 (411)
T KOG0599|consen 96 AFVFLVFDLMPRGELFDYLTS--KVTLSEKETRRIMRQLFEGVEYLHARN---IVHRDLKPENILLDDNMNIKISDFGFA 170 (411)
T ss_pred chhhhhhhhcccchHHHHhhh--heeecHHHHHHHHHHHHHHHHHHHHhh---hhhcccChhheeeccccceEEecccee
Confidence 999999999999999999954 446999999999999999999999998 999999999999999999999999999
Q ss_pred ccCCCCCCCCccccceecccccCCCccchhhhcc------CCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHh
Q 005227 524 RLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT------HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAY 597 (707)
Q Consensus 524 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~ 597 (707)
+.+.. .......+||++|.|||.+.. ..|+...|+||.||+||.++.|.+||.+.....
T Consensus 171 ~~l~~--------GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQml------- 235 (411)
T KOG0599|consen 171 CQLEP--------GEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQML------- 235 (411)
T ss_pred eccCC--------chhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHH-------
Confidence 98764 345567899999999999864 467889999999999999999999996533210
Q ss_pred hcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCC
Q 005227 598 QSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPS 677 (707)
Q Consensus 598 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~s 677 (707)
.+.-++..-.+.. -| ...+.+...+|+|.++|+.||.+|+|
T Consensus 236 ----------------------MLR~ImeGkyqF~---sp--------------eWadis~~~KdLIsrlLqVdp~~Rit 276 (411)
T KOG0599|consen 236 ----------------------MLRMIMEGKYQFR---SP--------------EWADISATVKDLISRLLQVDPTKRIT 276 (411)
T ss_pred ----------------------HHHHHHhcccccC---Cc--------------chhhccccHHHHHHHHHeeCchhccc
Confidence 1111111111100 01 11223445678999999999999999
Q ss_pred CCcCCCCCCCCC
Q 005227 678 SSSMLKHPYVSS 689 (707)
Q Consensus 678 a~e~L~Hp~f~~ 689 (707)
++|+|+||||..
T Consensus 277 ake~LaHpff~q 288 (411)
T KOG0599|consen 277 AKEALAHPFFIQ 288 (411)
T ss_pred HHHHhcChHHHH
Confidence 999999999943
No 59
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=2e-39 Score=338.27 Aligned_cols=261 Identities=20% Similarity=0.334 Sum_probs=209.8
Q ss_pred CcccccHHHHHHHhcCCCccceEeeeCceEEEEEEeCCCcEEEEEEeccCChhh---HHHHHHHHHHHHccCCCcceeEE
Q 005227 361 GVRSFTYGEMALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQG---EKEFLTEIQFLSRLHHRNLVSLV 437 (707)
Q Consensus 361 ~~~~~~~~~l~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~---~~~~~~E~~~l~~l~h~nIv~l~ 437 (707)
+...++.+++. ......||+|++|.||+|.+ +|+.||||++....... .+.+.+|+.+|++++||||++++
T Consensus 11 ~~~~i~~~~i~-----~~~~~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~ 84 (283)
T PHA02988 11 DIKCIESDDID-----KYTSVLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIY 84 (283)
T ss_pred cceecCHHHcC-----CCCCeEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEe
Confidence 34445555552 22346899999999999998 68999999987643322 35678999999999999999999
Q ss_pred EEEEe----CCeEEEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhC-CCCCeEecCCCCCCEEEcCC
Q 005227 438 GYCDE----EGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTE-ADPPVFHRDIKASNILLDHK 512 (707)
Q Consensus 438 ~~~~~----~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~-~~~~ivH~Dlkp~NILl~~~ 512 (707)
+++.+ ....++||||+++|+|.+++... ..+++.....++.|++.||.|||+. + ++||||||+||+++++
T Consensus 85 g~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~--~~~~~~~~~~i~~~i~~~l~~lH~~~~---~~Hrdlkp~nill~~~ 159 (283)
T PHA02988 85 GFIIDIVDDLPRLSLILEYCTRGYLREVLDKE--KDLSFKTKLDMAIDCCKGLYNLYKYTN---KPYKNLTSVSFLVTEN 159 (283)
T ss_pred eeEEecccCCCceEEEEEeCCCCcHHHHHhhC--CCCChhHHHHHHHHHHHHHHHHHhcCC---CCCCcCChhhEEECCC
Confidence 99876 34689999999999999999754 3588999999999999999999984 6 7899999999999999
Q ss_pred CcEEEeeecccccCCCCCCCCccccceecccccCCCccchhhhcc--CCCCCchhhHHHHHHHHHHHcCCCCCCCCchhH
Q 005227 513 FTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT--HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIV 590 (707)
Q Consensus 513 ~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~ 590 (707)
+.+||+|||+++...... ....|+..|+|||++.+ ..++.++|||||||++|||++|+.||..... .
T Consensus 160 ~~~kl~dfg~~~~~~~~~----------~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~-~ 228 (283)
T PHA02988 160 YKLKIICHGLEKILSSPP----------FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTT-K 228 (283)
T ss_pred CcEEEcccchHhhhcccc----------ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCH-H
Confidence 999999999998653211 12357889999999976 6899999999999999999999999975432 1
Q ss_pred HHHHHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 005227 591 REVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 651 (707)
Q Consensus 591 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~ 651 (707)
+....... .......+..++..+.+++.+||+.+|++||++.++++.|+.+..
T Consensus 229 ~~~~~i~~--------~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~~~ 281 (283)
T PHA02988 229 EIYDLIIN--------KNNSLKLPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLYKF 281 (283)
T ss_pred HHHHHHHh--------cCCCCCCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHHh
Confidence 11111111 111223445677889999999999999999999999999987754
No 60
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=2.2e-40 Score=353.95 Aligned_cols=197 Identities=30% Similarity=0.441 Sum_probs=175.1
Q ss_pred cCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCCh---hhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEE
Q 005227 375 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 450 (707)
Q Consensus 375 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~ 450 (707)
++|++.+.||+|+||.||+|... +++.||||++..... ...+.+.+|+++++.++||||+++++++...+..++||
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~ 80 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM 80 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence 46889999999999999999976 689999999875322 23456889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCC
Q 005227 451 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 530 (707)
Q Consensus 451 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~ 530 (707)
||+++|+|.+++... ..+++..++.++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 81 e~~~g~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~-- 153 (333)
T cd05600 81 EYVPGGDFRTLLNNL--GVLSEDHARFYMAEMFEAVDALHELG---YIHRDLKPENFLIDASGHIKLTDFGLSKGIVT-- 153 (333)
T ss_pred eCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEECCCCCEEEEeCcCCccccc--
Confidence 999999999999654 35889999999999999999999999 99999999999999999999999999975432
Q ss_pred CCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCC
Q 005227 531 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 586 (707)
Q Consensus 531 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~ 586 (707)
......||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 154 --------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~ 201 (333)
T cd05600 154 --------YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGS 201 (333)
T ss_pred --------ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCC
Confidence 223456899999999999999999999999999999999999999653
No 61
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=3.1e-41 Score=328.22 Aligned_cols=296 Identities=24% Similarity=0.350 Sum_probs=217.2
Q ss_pred HhcCCCccceEeeeCceEEEEEEeC---C--CcEEEEEEeccCChh--hHHHHHHHHHHHHccCCCcceeEEEEEEe-CC
Q 005227 373 ATNNFNSSTQIGQGGYGKVYKGILP---D--GTVVAVKRAQEGSLQ--GEKEFLTEIQFLSRLHHRNLVSLVGYCDE-EG 444 (707)
Q Consensus 373 ~~~~~~~~~~lG~G~fg~Vy~~~~~---~--~~~vavK~l~~~~~~--~~~~~~~E~~~l~~l~h~nIv~l~~~~~~-~~ 444 (707)
....|+....||+|+||.||+|+-. + .+.+|+|+++..... -.....+|+.+++.++||||+.+..++.. +.
T Consensus 22 ~l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~ 101 (438)
T KOG0666|consen 22 DLFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDK 101 (438)
T ss_pred HHHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCc
Confidence 3457888999999999999999743 2 237999999764322 23567899999999999999999999866 78
Q ss_pred eEEEEEecCCCCCHHHHHhhcC---CCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCC----CcEEE
Q 005227 445 EQMLVYEFMSNGTLRDQLSAKS---KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHK----FTAKV 517 (707)
Q Consensus 445 ~~~lV~E~~~~gsL~~~l~~~~---~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~----~~~kl 517 (707)
..++++||.+. +|.+.++-+. ...++...++.|.+||+.|+.|||++- |+||||||.||||..+ |.|||
T Consensus 102 ~v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NW---vlHRDLKPaNIlvmgdgperG~VKI 177 (438)
T KOG0666|consen 102 KVWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNW---VLHRDLKPANILVMGDGPERGRVKI 177 (438)
T ss_pred eEEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhh---eeeccCCcceEEEeccCCccCeeEe
Confidence 89999999976 9999987532 246889999999999999999999999 9999999999999877 99999
Q ss_pred eeecccccCCCCCCCCccccceecccccCCCccchhhhcc-CCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHH
Q 005227 518 ADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIA 596 (707)
Q Consensus 518 ~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~ 596 (707)
+|||+++.+..+- .+-.....++.|+.|+|||.+.+ ..|+.+.||||.||++.||+|-.+.|.......+
T Consensus 178 aDlGlaR~~~~pl----kpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~----- 248 (438)
T KOG0666|consen 178 ADLGLARLFNNPL----KPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIK----- 248 (438)
T ss_pred ecccHHHHhhccc----cccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcc-----
Confidence 9999999876532 12233445677999999999998 5689999999999999999999777753221100
Q ss_pred hhcccchhhccCCCCCCChHHHHHHHHHHHHhcccC---CCCCCCHHHHHHHHH----------HhhhcCCCCCCCCCcc
Q 005227 597 YQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDE---TDARPSMSEVMRELE----------SIWNMMPESDTKTPEF 663 (707)
Q Consensus 597 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~---p~~RPt~~~v~~~L~----------~~~~~~~~~~~~~~dl 663 (707)
+. .++..+...++.+++..=.+.+ -.+-|.....+..++ .........++...++
T Consensus 249 ----------~~--~Pfq~dQl~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~L 316 (438)
T KOG0666|consen 249 ----------TK--NPFQHDQLDRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDL 316 (438)
T ss_pred ----------cC--CCchHHHHHHHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHH
Confidence 00 0122222333333321111100 011122222222221 2222233456668899
Q ss_pred ccCCCCCCCCCCCCCCcCCCCCCCCCCCCC
Q 005227 664 INSEHTSKEETPPSSSSMLKHPYVSSDVSG 693 (707)
Q Consensus 664 l~~~L~~dP~~R~sa~e~L~Hp~f~~~~~~ 693 (707)
+.+||++||-+|+||++||+|+||+.+.-.
T Consensus 317 L~klL~yDP~kRIta~qAleh~yF~~d~lp 346 (438)
T KOG0666|consen 317 LQKLLTYDPIKRITAEQALEHPYFTEDPLP 346 (438)
T ss_pred HHHHhccCchhhccHHHHhcccccccCCCC
Confidence 999999999999999999999999988543
No 62
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=3.8e-40 Score=349.90 Aligned_cols=194 Identities=27% Similarity=0.422 Sum_probs=167.2
Q ss_pred ceEeeeCceEEEEEEeC-CCcEEEEEEeccCC---hhhHHHHHHHHHHHHcc-CCCcceeEEEEEEeCCeEEEEEecCCC
Q 005227 381 TQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQMLVYEFMSN 455 (707)
Q Consensus 381 ~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lV~E~~~~ 455 (707)
+.||+|+||+||+|..+ +++.||||++.... ....+.+..|..++..+ +||||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~ 80 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG 80 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999975 68999999987532 12234667888888876 699999999999999999999999999
Q ss_pred CCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCCCcc
Q 005227 456 GTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIV 535 (707)
Q Consensus 456 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 535 (707)
|+|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||+++.....
T Consensus 81 g~L~~~i~~~--~~l~~~~~~~~~~ql~~~L~~lH~~~---ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~------ 149 (320)
T cd05590 81 GDLMFHIQKS--RRFDEARARFYAAEITSALMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFN------ 149 (320)
T ss_pred chHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCCHHHeEECCCCcEEEeeCCCCeecCcC------
Confidence 9999998654 35899999999999999999999998 999999999999999999999999998753221
Q ss_pred ccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCC
Q 005227 536 PAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 586 (707)
Q Consensus 536 ~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~ 586 (707)
........||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 150 -~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~ 199 (320)
T cd05590 150 -GKTTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAE 199 (320)
T ss_pred -CCcccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCC
Confidence 11223456899999999999999999999999999999999999999643
No 63
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=2.7e-40 Score=352.19 Aligned_cols=194 Identities=27% Similarity=0.361 Sum_probs=169.0
Q ss_pred ceEeeeCceEEEEEEeC-CCcEEEEEEeccCCh---hhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEecCCCC
Q 005227 381 TQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNG 456 (707)
Q Consensus 381 ~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~g 456 (707)
+.||+|+||.||++..+ +++.||+|++..... .....+.+|+++++.++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g 80 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG 80 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence 46999999999999964 789999999875322 23356788999999999999999999999999999999999999
Q ss_pred CHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCCCccc
Q 005227 457 TLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVP 536 (707)
Q Consensus 457 sL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~ 536 (707)
+|.+++... ..+++..++.++.||+.||+|||+.+ |+||||||+|||+++++.+||+|||+++.....
T Consensus 81 ~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~------- 148 (328)
T cd05593 81 ELFFHLSRE--RVFSEDRTRFYGAEIVSALDYLHSGK---IVYRDLKLENLMLDKDGHIKITDFGLCKEGITD------- 148 (328)
T ss_pred CHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCC---eEecccCHHHeEECCCCcEEEecCcCCccCCCc-------
Confidence 999988654 35899999999999999999999998 999999999999999999999999998753221
Q ss_pred cceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCC
Q 005227 537 AHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 586 (707)
Q Consensus 537 ~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~ 586 (707)
........||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 149 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~ 198 (328)
T cd05593 149 AATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ 198 (328)
T ss_pred ccccccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCC
Confidence 11223456899999999999999999999999999999999999999643
No 64
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=2.8e-40 Score=351.37 Aligned_cols=195 Identities=26% Similarity=0.345 Sum_probs=169.0
Q ss_pred ceEeeeCceEEEEEEeC-CCcEEEEEEeccCCh---hhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEecCCCC
Q 005227 381 TQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNG 456 (707)
Q Consensus 381 ~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~g 456 (707)
+.||+|+||.||++... +|+.||+|++..... .....+.+|+++++.++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence 46999999999999964 789999999875322 22346778999999999999999999999999999999999999
Q ss_pred CHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCCCccc
Q 005227 457 TLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVP 536 (707)
Q Consensus 457 sL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~ 536 (707)
+|.+++... ..+++..++.++.||+.||+|||+.+ |+||||||+|||+++++.+||+|||+++......
T Consensus 81 ~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~------ 149 (323)
T cd05595 81 ELFFHLSRE--RVFTEERARFYGAEIVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG------ 149 (323)
T ss_pred cHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHEEEcCCCCEEecccHHhccccCCC------
Confidence 999988654 35899999999999999999999998 9999999999999999999999999987532211
Q ss_pred cceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCc
Q 005227 537 AHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 587 (707)
Q Consensus 537 ~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~~ 587 (707)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 150 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~ 199 (323)
T cd05595 150 -ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD 199 (323)
T ss_pred -CccccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCC
Confidence 11233568999999999999999999999999999999999999996543
No 65
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=5.3e-40 Score=343.03 Aligned_cols=200 Identities=27% Similarity=0.417 Sum_probs=175.1
Q ss_pred CCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCChh---hHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEe
Q 005227 376 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ---GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 451 (707)
Q Consensus 376 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~---~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E 451 (707)
+|++.++||+|+||+||++... +++.||||++...... ....+.+|+.+++.++|+||+++++++...+..++|||
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence 4788899999999999999964 7899999998753322 23457889999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCC
Q 005227 452 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 531 (707)
Q Consensus 452 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 531 (707)
|+++|+|.+++.......+++..+..++.|++.||.|||+.+ |+||||||+||++++++.++|+|||+++......
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~- 156 (285)
T cd05605 81 LMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRER---IVYRDLKPENILLDDYGHIRISDLGLAVEIPEGE- 156 (285)
T ss_pred ccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCC---cEecCCCHHHEEECCCCCEEEeeCCCceecCCCC-
Confidence 999999999987655567999999999999999999999998 9999999999999999999999999997653211
Q ss_pred CCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCC
Q 005227 532 EGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 586 (707)
Q Consensus 532 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~ 586 (707)
......|+..|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 157 -------~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~ 204 (285)
T cd05605 157 -------TIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQR 204 (285)
T ss_pred -------ccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCC
Confidence 112346899999999999999999999999999999999999999643
No 66
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=3.6e-40 Score=349.72 Aligned_cols=282 Identities=25% Similarity=0.345 Sum_probs=196.9
Q ss_pred cceEeeeCceEEEEEEeC---CCcEEEEEEeccCChhhHHHHHHHHHHHHccCCCcceeEEEEEEe--CCeEEEEEecCC
Q 005227 380 STQIGQGGYGKVYKGILP---DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE--EGEQMLVYEFMS 454 (707)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~---~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~--~~~~~lV~E~~~ 454 (707)
.++||+|+||+||+|... +++.||+|.+.... ....+.+|++++++++||||+++++++.. ....++||||+.
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~ 83 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE 83 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC--CcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccC
Confidence 468999999999999964 46789999987543 23457889999999999999999999854 456899999995
Q ss_pred CCCHHHHHhhc-------CCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEE----cCCCcEEEeeeccc
Q 005227 455 NGTLRDQLSAK-------SKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILL----DHKFTAKVADFGLS 523 (707)
Q Consensus 455 ~gsL~~~l~~~-------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl----~~~~~~kl~DFGla 523 (707)
++|.+++... ....+++..++.++.||+.||+|||+.+ |+||||||+|||+ +.++.+||+|||++
T Consensus 84 -~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~---ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a 159 (317)
T cd07868 84 -HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGFA 159 (317)
T ss_pred -CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCC---EEcCCCCHHHEEEecCCCCcCcEEEeecCce
Confidence 5898887542 1235889999999999999999999999 9999999999999 46679999999999
Q ss_pred ccCCCCCCCCccccceecccccCCCccchhhhcc-CCCCCchhhHHHHHHHHHHHcCCCCCCCCchhH--------HHHH
Q 005227 524 RLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIV--------REVN 594 (707)
Q Consensus 524 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~--------~~~~ 594 (707)
+....... .........||+.|+|||++.+ ..++.++||||+||++|||++|+.||....... +...
T Consensus 160 ~~~~~~~~----~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~ 235 (317)
T cd07868 160 RLFNSPLK----PLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLD 235 (317)
T ss_pred eccCCCCc----cccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCcccccccccccHHHHH
Confidence 86543211 1112234568999999999987 458999999999999999999999996432210 0010
Q ss_pred HHhhcccchhhccCCCCCCChHHHHHHHHHH-----HHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCC
Q 005227 595 IAYQSSMMFSVIDGNMGSYPSECVEKFIKLA-----LKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHT 669 (707)
Q Consensus 595 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~-----~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~ 669 (707)
... . ..+......+..+.+.. ...+........ .+.+.++ ......+..+.|||.+||+
T Consensus 236 ~~~------~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~---~~~~~~~~~~~dli~~mL~ 299 (317)
T cd07868 236 RIF------N----VMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNC---SLIKYME---KHKVKPDSKAFHLLQKLLT 299 (317)
T ss_pred HHH------H----hcCCCChHHhHHHhhccchhhhhhhhhccccCcc---cccchHH---hcCCCCChHHHHHHHHHhc
Confidence 000 0 00111111111111000 000000000000 0111111 1112234456789999999
Q ss_pred CCCCCCCCCCcCCCCCCC
Q 005227 670 SKEETPPSSSSMLKHPYV 687 (707)
Q Consensus 670 ~dP~~R~sa~e~L~Hp~f 687 (707)
+||++|+|++|+|+||||
T Consensus 300 ~dP~~R~t~~e~l~hp~f 317 (317)
T cd07868 300 MDPIKRITSEQAMQDPYF 317 (317)
T ss_pred cCcccCCCHHHHhcCCCC
Confidence 999999999999999998
No 67
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=4.5e-40 Score=351.43 Aligned_cols=199 Identities=27% Similarity=0.346 Sum_probs=170.4
Q ss_pred CCCccceEeeeCceEEEEEEe----CCCcEEEEEEeccCC----hhhHHHHHHHHHHHHcc-CCCcceeEEEEEEeCCeE
Q 005227 376 NFNSSTQIGQGGYGKVYKGIL----PDGTVVAVKRAQEGS----LQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQ 446 (707)
Q Consensus 376 ~~~~~~~lG~G~fg~Vy~~~~----~~~~~vavK~l~~~~----~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~ 446 (707)
+|++.+.||+|+||+||++.. .+++.||+|++.... ....+.+.+|+++++.+ +|+||+++++++...+..
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL 80 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence 478899999999999999885 368899999986422 12235678899999999 599999999999999999
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccC
Q 005227 447 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 526 (707)
Q Consensus 447 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~ 526 (707)
++||||+++|+|.+++... ..+++..++.++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 81 ~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~---ivHrDlkp~Nili~~~~~~kl~DfG~~~~~ 155 (332)
T cd05614 81 HLILDYVSGGEMFTHLYQR--DNFSEDEVRFYSGEIILALEHLHKLG---IVYRDIKLENILLDSEGHVVLTDFGLSKEF 155 (332)
T ss_pred EEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---cEecCCCHHHeEECCCCCEEEeeCcCCccc
Confidence 9999999999999999654 35899999999999999999999998 999999999999999999999999999765
Q ss_pred CCCCCCCccccceecccccCCCccchhhhccC-CCCCchhhHHHHHHHHHHHcCCCCCCC
Q 005227 527 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVFLELLTGMQPISH 585 (707)
Q Consensus 527 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~sDVwSlGvll~elltG~~pf~~ 585 (707)
.... ........||..|+|||++.+. .++.++|||||||++|||++|+.||..
T Consensus 156 ~~~~------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~ 209 (332)
T cd05614 156 LSEE------KERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTL 209 (332)
T ss_pred cccC------CCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCC
Confidence 3222 1122345689999999999875 478899999999999999999999963
No 68
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=7e-40 Score=360.85 Aligned_cols=283 Identities=21% Similarity=0.268 Sum_probs=206.1
Q ss_pred hcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEec
Q 005227 374 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 452 (707)
Q Consensus 374 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~ 452 (707)
..+|.+.+.||+|+||.||+|... +++.||||.... ..+.+|++++++++|+||+++++++...+..++|||+
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~------~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~ 241 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY------ASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPK 241 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc------cCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEc
Confidence 457999999999999999999975 588999996432 2456899999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCC
Q 005227 453 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 532 (707)
Q Consensus 453 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 532 (707)
+ .++|.+++.... ..+++..++.++.|+++||.|||+.+ |+||||||+|||++.++.+||+|||+++.......
T Consensus 242 ~-~~~L~~~l~~~~-~~l~~~~~~~i~~qi~~aL~yLH~~g---IvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~- 315 (461)
T PHA03211 242 Y-RSDLYTYLGARL-RPLGLAQVTAVARQLLSAIDYIHGEG---IIHRDIKTENVLVNGPEDICLGDFGAACFARGSWS- 315 (461)
T ss_pred c-CCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCC---EEECcCCHHHEEECCCCCEEEcccCCceecccccc-
Confidence 9 479998886532 36999999999999999999999998 99999999999999999999999999986543211
Q ss_pred CccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCch------hHHHHHHHhhcccchhhc
Q 005227 533 GIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKN------IVREVNIAYQSSMMFSVI 606 (707)
Q Consensus 533 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~~~------~~~~~~~~~~~~~~~~~~ 606 (707)
........||..|+|||++.+..++.++|||||||++|||++|..++..... ....+.........
T Consensus 316 ----~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~---- 387 (461)
T PHA03211 316 ----TPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQV---- 387 (461)
T ss_pred ----cccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhcc----
Confidence 1112345699999999999999999999999999999999998876643221 01111111110000
Q ss_pred cCCCCCCChHHHHHHHHHHHH---hcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCCC
Q 005227 607 DGNMGSYPSECVEKFIKLALK---CCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLK 683 (707)
Q Consensus 607 ~~~~~~~~~~~~~~l~~l~~~---c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~ 683 (707)
....++......+...... .....+..++.. ..+...+....+||.+||++||++|||++|+|+
T Consensus 388 --~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~ 454 (461)
T PHA03211 388 --HVDEFPQHAGSRLVSQYRHRAARNRRPAYTRPAW-----------TRYYKLDLDVEYLVCRALTFDGARRPSAAELLR 454 (461)
T ss_pred --ccccCCCCcchHHHHHHHhhhhcccCCccCCcch-----------hhhccccchHHHHHHHHcccChhhCcCHHHHhh
Confidence 0011111111111111110 001111111111 111233445678999999999999999999999
Q ss_pred CCCCCC
Q 005227 684 HPYVSS 689 (707)
Q Consensus 684 Hp~f~~ 689 (707)
||||.+
T Consensus 455 hp~f~~ 460 (461)
T PHA03211 455 LPLFQS 460 (461)
T ss_pred CcccCC
Confidence 999976
No 69
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=2.9e-40 Score=357.49 Aligned_cols=208 Identities=26% Similarity=0.381 Sum_probs=175.8
Q ss_pred cCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCC---hhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEE
Q 005227 375 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 450 (707)
Q Consensus 375 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~ 450 (707)
++|++.+.||+|+||+||+|... +++.||||++.... ......+.+|+++++.++|+||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM 80 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence 47889999999999999999975 68999999987532 122356788999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCC
Q 005227 451 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 530 (707)
Q Consensus 451 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~ 530 (707)
||+++|+|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||++.......
T Consensus 81 E~~~~g~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~lH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 155 (364)
T cd05599 81 EYLPGGDMMTLLMKK--DTFTEEETRFYIAETILAIDSIHKLG---YIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSH 155 (364)
T ss_pred CCCCCcHHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeEECCCCCEEEeecccceeccccc
Confidence 999999999999654 35899999999999999999999999 9999999999999999999999999987543211
Q ss_pred CCCccc-------------------------------cceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcC
Q 005227 531 IEGIVP-------------------------------AHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTG 579 (707)
Q Consensus 531 ~~~~~~-------------------------------~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG 579 (707)
...... ........||+.|+|||++.+..++.++|||||||++|||++|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G 235 (364)
T cd05599 156 RTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVG 235 (364)
T ss_pred cccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcC
Confidence 000000 0011124699999999999999999999999999999999999
Q ss_pred CCCCCCCc
Q 005227 580 MQPISHGK 587 (707)
Q Consensus 580 ~~pf~~~~ 587 (707)
..||....
T Consensus 236 ~~Pf~~~~ 243 (364)
T cd05599 236 YPPFCSDN 243 (364)
T ss_pred CCCCCCCC
Confidence 99996543
No 70
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=3.3e-40 Score=357.20 Aligned_cols=263 Identities=21% Similarity=0.279 Sum_probs=203.7
Q ss_pred HHhcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCC---hhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEE
Q 005227 372 LATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQM 447 (707)
Q Consensus 372 ~~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~ 447 (707)
...++|++.+.||+|+||+||+|... +++.||+|++.... ....+.+.+|+.+++.++||||+++++++.+.+..+
T Consensus 40 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~ 119 (370)
T cd05596 40 MKAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLY 119 (370)
T ss_pred CCHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEE
Confidence 44568999999999999999999965 68999999986422 122345778999999999999999999999999999
Q ss_pred EEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCC
Q 005227 448 LVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAP 527 (707)
Q Consensus 448 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~ 527 (707)
+||||+++|+|.+++... .+++..+..++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||+++...
T Consensus 120 lv~Ey~~gg~L~~~l~~~---~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~ 193 (370)
T cd05596 120 MVMEYMPGGDLVNLMSNY---DIPEKWARFYTAEVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTCMKMD 193 (370)
T ss_pred EEEcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEEcCCCCEEEEeccceeecc
Confidence 999999999999998653 4788889999999999999999998 9999999999999999999999999997653
Q ss_pred CCCCCCccccceecccccCCCccchhhhccC----CCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccch
Q 005227 528 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLTH----KLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMF 603 (707)
Q Consensus 528 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~ 603 (707)
... ........||+.|+|||++.+. .++.++|||||||++|||++|+.||...... ....
T Consensus 194 ~~~------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~-~~~~--------- 257 (370)
T cd05596 194 ANG------MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV-GTYS--------- 257 (370)
T ss_pred CCC------cccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHH-HHHH---------
Confidence 221 1112345689999999998753 4788999999999999999999999653321 1000
Q ss_pred hhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCC--CCCCCcC
Q 005227 604 SVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEET--PPSSSSM 681 (707)
Q Consensus 604 ~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~--R~sa~e~ 681 (707)
+++. ..+ .... ......+..+.+||.+||+.+|++ |+|++|+
T Consensus 258 -------------------~i~~----~~~--~~~~-----------~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~el 301 (370)
T cd05596 258 -------------------KIMD----HKN--SLTF-----------PDDIEISKQAKDLICAFLTDREVRLGRNGVDEI 301 (370)
T ss_pred -------------------HHHc----CCC--cCCC-----------CCcCCCCHHHHHHHHHHccChhhccCCCCHHHH
Confidence 0000 000 0000 000112334456788888888877 8899999
Q ss_pred CCCCCCCCCCC
Q 005227 682 LKHPYVSSDVS 692 (707)
Q Consensus 682 L~Hp~f~~~~~ 692 (707)
++||||....+
T Consensus 302 l~h~~~~~~~~ 312 (370)
T cd05596 302 KSHPFFKNDQW 312 (370)
T ss_pred hcCcccCCCCh
Confidence 99999887654
No 71
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=4.8e-40 Score=355.61 Aligned_cols=205 Identities=22% Similarity=0.319 Sum_probs=175.6
Q ss_pred HHHHhcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCC---hhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCe
Q 005227 370 MALATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGE 445 (707)
Q Consensus 370 l~~~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~ 445 (707)
+....++|++.+.||+|+||.||++... +++.||+|++.... ....+.+.+|+.+++.++||||+++++++.+++.
T Consensus 38 ~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~ 117 (370)
T cd05621 38 LQMKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKY 117 (370)
T ss_pred cCCCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCE
Confidence 3444578999999999999999999975 68899999986422 1223467889999999999999999999999999
Q ss_pred EEEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeeccccc
Q 005227 446 QMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRL 525 (707)
Q Consensus 446 ~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~ 525 (707)
.++||||+++|+|.+++... .+++..+..++.||+.||+|||+.+ |+||||||+|||+++++.+||+|||++..
T Consensus 118 ~~lv~Ey~~gg~L~~~l~~~---~~~~~~~~~~~~qil~aL~~LH~~~---IvHrDLKp~NILl~~~~~~kL~DFG~a~~ 191 (370)
T cd05621 118 LYMVMEYMPGGDLVNLMSNY---DVPEKWAKFYTAEVVLALDAIHSMG---LIHRDVKPDNMLLDKHGHLKLADFGTCMK 191 (370)
T ss_pred EEEEEcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHEEECCCCCEEEEeccccee
Confidence 99999999999999999643 4788999999999999999999998 99999999999999999999999999986
Q ss_pred CCCCCCCCccccceecccccCCCccchhhhccC----CCCCchhhHHHHHHHHHHHcCCCCCCCC
Q 005227 526 APVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTH----KLTDKSDVYSLGVVFLELLTGMQPISHG 586 (707)
Q Consensus 526 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~s~~sDVwSlGvll~elltG~~pf~~~ 586 (707)
..... ........||+.|+|||++.+. .++.++||||+||++|||++|+.||...
T Consensus 192 ~~~~~------~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~ 250 (370)
T cd05621 192 MDETG------MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYAD 250 (370)
T ss_pred cccCC------ceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCC
Confidence 53221 1122345799999999999764 3788999999999999999999999654
No 72
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=5.5e-40 Score=350.00 Aligned_cols=192 Identities=26% Similarity=0.389 Sum_probs=166.8
Q ss_pred ceEeeeCceEEEEEEeC-CCcEEEEEEeccCC---hhhHHHHHHHHHHHHcc-CCCcceeEEEEEEeCCeEEEEEecCCC
Q 005227 381 TQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQMLVYEFMSN 455 (707)
Q Consensus 381 ~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lV~E~~~~ 455 (707)
+.||+|+||+||+|..+ +++.||+|++.... ....+.+.+|+.++.++ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 46999999999999965 68899999987532 22335677899988877 899999999999999999999999999
Q ss_pred CCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCCCcc
Q 005227 456 GTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIV 535 (707)
Q Consensus 456 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 535 (707)
|+|.+++... ..+++..++.++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+++......
T Consensus 81 ~~L~~~~~~~--~~l~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~----- 150 (329)
T cd05618 81 GDLMFHMQRQ--RKLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG----- 150 (329)
T ss_pred CCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEECCCCCEEEeeCCccccccCCC-----
Confidence 9999988654 35899999999999999999999998 9999999999999999999999999987532211
Q ss_pred ccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCC
Q 005227 536 PAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPIS 584 (707)
Q Consensus 536 ~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~ 584 (707)
.......||..|+|||++.+..++.++|||||||++|||++|+.||.
T Consensus 151 --~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~ 197 (329)
T cd05618 151 --DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 197 (329)
T ss_pred --CccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCc
Confidence 12234568999999999999999999999999999999999999995
No 73
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=8.6e-40 Score=345.60 Aligned_cols=287 Identities=22% Similarity=0.352 Sum_probs=211.2
Q ss_pred cCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCChh-hHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEec
Q 005227 375 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ-GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 452 (707)
Q Consensus 375 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~-~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~ 452 (707)
++|...+.||+|+||+||+|..+ +++.||+|.+...... ....+.+|++++++++|+||+++++++..++..++||||
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 85 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEY 85 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeC
Confidence 57889999999999999999965 6889999998754322 234678899999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCC
Q 005227 453 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 532 (707)
Q Consensus 453 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 532 (707)
+++ +|.+++.... ..+++..++.++.|++.||+|||+.+ |+||||||+||++++++.+||+|||+++......
T Consensus 86 ~~~-~l~~~~~~~~-~~~~~~~~~~~~~qi~~aL~~lH~~~---ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~-- 158 (309)
T cd07872 86 LDK-DLKQYMDDCG-NIMSMHNVKIFLYQILRGLAYCHRRK---VLHRDLKPQNLLINERGELKLADFGLARAKSVPT-- 158 (309)
T ss_pred CCC-CHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEECccccceecCCCc--
Confidence 964 8888886543 35889999999999999999999998 9999999999999999999999999997543221
Q ss_pred CccccceecccccCCCccchhhhcc-CCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCCCC
Q 005227 533 GIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 611 (707)
Q Consensus 533 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 611 (707)
.......++..|+|||++.+ ..++.++|||||||++|||++|+.||...... +....... .. +
T Consensus 159 -----~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~-~~~~~~~~------~~----~ 222 (309)
T cd07872 159 -----KTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVE-DELHLIFR------LL----G 222 (309)
T ss_pred -----cccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHH------Hh----C
Confidence 11223457889999999875 56899999999999999999999999654331 11111110 00 0
Q ss_pred CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCCCCCCCCCCC
Q 005227 612 SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSSDV 691 (707)
Q Consensus 612 ~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f~~~~ 691 (707)
..+.+....+.......-...|..+|.. .....+..+....||+.+||..||++|+|++|+|+||||..-.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~~ 293 (309)
T cd07872 223 TPTEETWPGISSNDEFKNYNFPKYKPQP---------LINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKHAYFRSLG 293 (309)
T ss_pred CCCHHHHhhhcchhhhhhhhcCccCCCc---------hhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcChhhhhcc
Confidence 1111111111100000000111111110 1122234455667999999999999999999999999998754
Q ss_pred CC
Q 005227 692 SG 693 (707)
Q Consensus 692 ~~ 693 (707)
..
T Consensus 294 ~~ 295 (309)
T cd07872 294 TR 295 (309)
T ss_pred cc
Confidence 43
No 74
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=1.1e-39 Score=352.70 Aligned_cols=207 Identities=26% Similarity=0.370 Sum_probs=175.6
Q ss_pred cCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCCh---hhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEE
Q 005227 375 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 450 (707)
Q Consensus 375 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~ 450 (707)
++|+..+.||+|+||+||+|... +++.||||++..... .....+.+|+.++.+++|+||+++++++.+....++||
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~ 80 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM 80 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence 47889999999999999999965 689999999875322 22356788999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCC
Q 005227 451 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 530 (707)
Q Consensus 451 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~ 530 (707)
||+++|+|.+++... ..+++..++.++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 81 E~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~lH~~g---ivHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~ 155 (363)
T cd05628 81 EFLPGGDMMTLLMKK--DTLTEEETQFYIAETVLAIDSIHQLG---FIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAH 155 (363)
T ss_pred cCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCC---eEecCCCHHHeEECCCCCEEEeeccCcccccccc
Confidence 999999999999754 35899999999999999999999998 9999999999999999999999999997643211
Q ss_pred CCCc----------------------------cccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCC
Q 005227 531 IEGI----------------------------VPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQP 582 (707)
Q Consensus 531 ~~~~----------------------------~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~p 582 (707)
.... ..........||+.|+|||++.+..++.++|||||||++|||++|+.|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~P 235 (363)
T cd05628 156 RTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPP 235 (363)
T ss_pred cccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCC
Confidence 0000 000011245799999999999999999999999999999999999999
Q ss_pred CCCC
Q 005227 583 ISHG 586 (707)
Q Consensus 583 f~~~ 586 (707)
|...
T Consensus 236 f~~~ 239 (363)
T cd05628 236 FCSE 239 (363)
T ss_pred CCCC
Confidence 9643
No 75
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=7.4e-40 Score=341.04 Aligned_cols=194 Identities=25% Similarity=0.404 Sum_probs=167.9
Q ss_pred EeeeCceEEEEEEeC-CCcEEEEEEeccCChh---hHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEecCCCCCH
Q 005227 383 IGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ---GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTL 458 (707)
Q Consensus 383 lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~---~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL 458 (707)
||+|+||+||++... +++.||+|.+...... ..+.+..|+++++.++|+||+++.+++......++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 699999999999965 7899999998653322 224677899999999999999999999999999999999999999
Q ss_pred HHHHhhc--CCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCCCccc
Q 005227 459 RDQLSAK--SKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVP 536 (707)
Q Consensus 459 ~~~l~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~ 536 (707)
.+++... ....+++..++.++.||+.||+|||+.+ |+||||||+||++++++.+||+|||++.......
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~------ 151 (280)
T cd05608 81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRR---IIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQ------ 151 (280)
T ss_pred HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEeeCccceecCCCC------
Confidence 9888542 3346899999999999999999999998 9999999999999999999999999997654321
Q ss_pred cceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCC
Q 005227 537 AHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 586 (707)
Q Consensus 537 ~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~ 586 (707)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 152 -~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~ 200 (280)
T cd05608 152 -SKTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRAR 200 (280)
T ss_pred -ccccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCC
Confidence 1122346899999999999999999999999999999999999999643
No 76
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=6.6e-40 Score=348.64 Aligned_cols=195 Identities=27% Similarity=0.414 Sum_probs=168.2
Q ss_pred ceEeeeCceEEEEEEe----CCCcEEEEEEeccCCh----hhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEec
Q 005227 381 TQIGQGGYGKVYKGIL----PDGTVVAVKRAQEGSL----QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 452 (707)
Q Consensus 381 ~~lG~G~fg~Vy~~~~----~~~~~vavK~l~~~~~----~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~ 452 (707)
+.||+|+||.||++.. .+++.||||++..... .....+.+|+++++.++||||+++++++..++..++||||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~ 81 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY 81 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence 6799999999999985 3578999999875321 2234678899999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCC
Q 005227 453 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 532 (707)
Q Consensus 453 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 532 (707)
+++++|.+++.... .+.+..+..++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||+++......
T Consensus 82 ~~~~~L~~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-- 154 (323)
T cd05584 82 LSGGELFMHLEREG--IFMEDTACFYLSEISLALEHLHQQG---IIYRDLKPENILLDAQGHVKLTDFGLCKESIHEG-- 154 (323)
T ss_pred CCCchHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCCEEEeeCcCCeecccCC--
Confidence 99999999996543 4788889999999999999999998 9999999999999999999999999987532211
Q ss_pred CccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCc
Q 005227 533 GIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 587 (707)
Q Consensus 533 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~~ 587 (707)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 155 -----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~ 204 (323)
T cd05584 155 -----TVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAEN 204 (323)
T ss_pred -----CcccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCC
Confidence 11233568999999999999899999999999999999999999996543
No 77
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=5.6e-40 Score=356.89 Aligned_cols=207 Identities=26% Similarity=0.346 Sum_probs=173.7
Q ss_pred cCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCCh---hhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEE
Q 005227 375 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 450 (707)
Q Consensus 375 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~ 450 (707)
++|++.+.||+|+||+||+|... +++.||||++..... ...+.+.+|+++++.++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM 80 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence 47889999999999999999964 789999999864321 22356788999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCC
Q 005227 451 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 530 (707)
Q Consensus 451 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~ 530 (707)
||+++|+|.+++... ..+++..++.++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 81 E~~~gg~L~~~l~~~--~~~~~~~~~~~~~ql~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~ 155 (377)
T cd05629 81 EFLPGGDLMTMLIKY--DTFSEDVTRFYMAECVLAIEAVHKLG---FIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQH 155 (377)
T ss_pred eCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHEEECCCCCEEEeeccccccccccc
Confidence 999999999999653 45889999999999999999999999 9999999999999999999999999996432110
Q ss_pred CC----------Cccc------------------------------cceecccccCCCccchhhhccCCCCCchhhHHHH
Q 005227 531 IE----------GIVP------------------------------AHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLG 570 (707)
Q Consensus 531 ~~----------~~~~------------------------------~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlG 570 (707)
.. .... ........||+.|+|||++.+..++.++||||||
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG 235 (377)
T cd05629 156 DSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLG 235 (377)
T ss_pred ccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecc
Confidence 00 0000 0000124699999999999999999999999999
Q ss_pred HHHHHHHcCCCCCCCC
Q 005227 571 VVFLELLTGMQPISHG 586 (707)
Q Consensus 571 vll~elltG~~pf~~~ 586 (707)
|++|||++|+.||...
T Consensus 236 vil~elltG~~Pf~~~ 251 (377)
T cd05629 236 AIMFECLIGWPPFCSE 251 (377)
T ss_pred hhhhhhhcCCCCCCCC
Confidence 9999999999999643
No 78
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=4.1e-39 Score=332.80 Aligned_cols=256 Identities=25% Similarity=0.408 Sum_probs=208.5
Q ss_pred hcCCCccceEeeeCceEEEEEEeC----CCcEEEEEEeccCCh-hhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEE
Q 005227 374 TNNFNSSTQIGQGGYGKVYKGILP----DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 448 (707)
Q Consensus 374 ~~~~~~~~~lG~G~fg~Vy~~~~~----~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~l 448 (707)
.++|++.+.||+|+||.||+|.++ .+..||+|.++.... .....+.+|+..+++++||||+++++++...+..++
T Consensus 4 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 83 (266)
T cd05064 4 NKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMI 83 (266)
T ss_pred hHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEE
Confidence 457888999999999999999853 367899999886433 334578999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCC
Q 005227 449 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 528 (707)
Q Consensus 449 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~ 528 (707)
||||+++|+|.+++.... ..+++..++.++.|++.||+|||+.+ ++||||||+||+++.++.+|++|||.+.....
T Consensus 84 v~e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~~i~~al~~lH~~~---iiH~dikp~nili~~~~~~~l~dfg~~~~~~~ 159 (266)
T cd05064 84 VTEYMSNGALDSFLRKHE-GQLVAGQLMGMLPGLASGMKYLSEMG---YVHKGLAAHKVLVNSDLVCKISGFRRLQEDKS 159 (266)
T ss_pred EEEeCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCC---EeeccccHhhEEEcCCCcEEECCCcccccccc
Confidence 999999999999997643 46899999999999999999999998 99999999999999999999999998764321
Q ss_pred CCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHhhcccchhhcc
Q 005227 529 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVID 607 (707)
Q Consensus 529 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 607 (707)
.. ........++..|+|||++.+..++.++|||||||++||+++ |+.||...... +.... +.+
T Consensus 160 ~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~-~~~~~---------~~~ 223 (266)
T cd05064 160 EA------IYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQ-DVIKA---------VED 223 (266)
T ss_pred cc------hhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHH-HHHHH---------HHC
Confidence 11 011112234678999999999999999999999999999875 99999654331 11111 112
Q ss_pred CCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 005227 608 GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 649 (707)
Q Consensus 608 ~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~ 649 (707)
+.....+..++..+.+++.+||+.+|++||++.++.+.|..+
T Consensus 224 ~~~~~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 224 GFRLPAPRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred CCCCCCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence 222334566778899999999999999999999999988753
No 79
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=4.4e-40 Score=350.31 Aligned_cols=194 Identities=26% Similarity=0.338 Sum_probs=167.8
Q ss_pred ceEeeeCceEEEEEEeC-CCcEEEEEEeccCC---hhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEecCCCC
Q 005227 381 TQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNG 456 (707)
Q Consensus 381 ~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~g 456 (707)
+.||+|+||.||++... +++.||+|++.... ......+..|+++++.++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 46999999999999964 78999999987532 122356778999999999999999999999999999999999999
Q ss_pred CHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHh-CCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCCCcc
Q 005227 457 TLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHT-EADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIV 535 (707)
Q Consensus 457 sL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 535 (707)
+|.+++... ..+++..++.++.||+.||+|||+ .+ |+||||||+|||+++++.+||+|||+++......
T Consensus 81 ~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~lH~~~~---ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~----- 150 (325)
T cd05594 81 ELFFHLSRE--RVFSEDRARFYGAEIVSALDYLHSEKN---VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG----- 150 (325)
T ss_pred cHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhcCC---EEecCCCCCeEEECCCCCEEEecCCCCeecCCCC-----
Confidence 999988654 358999999999999999999997 67 9999999999999999999999999987532211
Q ss_pred ccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCC
Q 005227 536 PAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 586 (707)
Q Consensus 536 ~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~ 586 (707)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 151 --~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~ 199 (325)
T cd05594 151 --ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ 199 (325)
T ss_pred --cccccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCC
Confidence 1223356899999999999999999999999999999999999999643
No 80
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=2.1e-39 Score=349.97 Aligned_cols=290 Identities=22% Similarity=0.312 Sum_probs=212.6
Q ss_pred HhcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccC--ChhhHHHHHHHHHHHHccCCCcceeEEEEEEeCC-----
Q 005227 373 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEG--SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG----- 444 (707)
Q Consensus 373 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~----- 444 (707)
..++|+..+.||+|+||.||+|... +|+.||||++... .......+.+|+.+++.++||||+++++++...+
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 98 (359)
T cd07876 19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEF 98 (359)
T ss_pred hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCcccc
Confidence 3578999999999999999999964 6899999998643 2233467889999999999999999999986443
Q ss_pred -eEEEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeeccc
Q 005227 445 -EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLS 523 (707)
Q Consensus 445 -~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla 523 (707)
..++||||+++ +|.+.+.. .+++..+..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||++
T Consensus 99 ~~~~lv~e~~~~-~l~~~~~~----~~~~~~~~~~~~qi~~~L~~LH~~~---ivHrDlkp~NIl~~~~~~~kl~Dfg~a 170 (359)
T cd07876 99 QDVYLVMELMDA-NLCQVIHM----ELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLA 170 (359)
T ss_pred ceeEEEEeCCCc-CHHHHHhc----cCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCCCCEEEecCCCc
Confidence 57999999964 67776632 3788899999999999999999999 999999999999999999999999999
Q ss_pred ccCCCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccch
Q 005227 524 RLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMF 603 (707)
Q Consensus 524 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~ 603 (707)
+..... .......||..|+|||++.+..++.++|||||||++|||++|+.||........+....
T Consensus 171 ~~~~~~--------~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~------- 235 (359)
T cd07876 171 RTACTN--------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVI------- 235 (359)
T ss_pred cccccC--------ccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH-------
Confidence 754321 11233468999999999999999999999999999999999999997654432221110
Q ss_pred hhccCCCCCCChHHHHHHHHHHHHhcccCCCCCC-CHHHHHHHHH--HhhhcCCCCCCCCCccccCCCCCCCCCCCCCCc
Q 005227 604 SVIDGNMGSYPSECVEKFIKLALKCCQDETDARP-SMSEVMRELE--SIWNMMPESDTKTPEFINSEHTSKEETPPSSSS 680 (707)
Q Consensus 604 ~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RP-t~~~v~~~L~--~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e 680 (707)
...+..+.+....+...........|.... +..+...... .........+....+||.+||+.||++|+|++|
T Consensus 236 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e 311 (359)
T cd07876 236 ----EQLGTPSAEFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDE 311 (359)
T ss_pred ----HhcCCCcHHHHHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHH
Confidence 011222333333333333333333332221 2222111100 000001112345578999999999999999999
Q ss_pred CCCCCCCCC
Q 005227 681 MLKHPYVSS 689 (707)
Q Consensus 681 ~L~Hp~f~~ 689 (707)
+|+||||..
T Consensus 312 ~l~hp~~~~ 320 (359)
T cd07876 312 ALRHPYITV 320 (359)
T ss_pred HhcCchhhh
Confidence 999999864
No 81
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-39 Score=345.86 Aligned_cols=260 Identities=25% Similarity=0.378 Sum_probs=216.3
Q ss_pred hcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCChhh---HHHHHHHHHHHHccC-CCcceeEEEEEEeCCeEEE
Q 005227 374 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQG---EKEFLTEIQFLSRLH-HRNLVSLVGYCDEEGEQML 448 (707)
Q Consensus 374 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~---~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~~l 448 (707)
...|+..+.||+|.||.||+++.+ +|+.+|+|.+....... ...+.+|+++|+++. |||||.++++|++....++
T Consensus 34 ~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~l 113 (382)
T KOG0032|consen 34 KEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYL 113 (382)
T ss_pred cccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEE
Confidence 456888899999999999999976 59999999998755433 358999999999998 9999999999999999999
Q ss_pred EEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCC----CcEEEeeecccc
Q 005227 449 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHK----FTAKVADFGLSR 524 (707)
Q Consensus 449 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~----~~~kl~DFGla~ 524 (707)
|||++.||.|.+.+... .+++..+..++.|++.|+.|||+.+ |+||||||+|+|+... +.+|++|||+|.
T Consensus 114 vmEL~~GGeLfd~i~~~---~~sE~da~~~~~~il~av~~lH~~g---vvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~ 187 (382)
T KOG0032|consen 114 VMELCEGGELFDRIVKK---HYSERDAAGIIRQILEAVKYLHSLG---VVHRDLKPENLLLASKDEGSGRIKLIDFGLAK 187 (382)
T ss_pred EEEecCCchHHHHHHHc---cCCHHHHHHHHHHHHHHHHHHHhCC---ceeccCCHHHeeeccccCCCCcEEEeeCCCce
Confidence 99999999999999776 2999999999999999999999999 9999999999999633 579999999998
Q ss_pred cCCCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchh
Q 005227 525 LAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFS 604 (707)
Q Consensus 525 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~ 604 (707)
.... .......+||+.|+|||++....|+..+||||+||++|.|++|..||....+.....
T Consensus 188 ~~~~--------~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~----------- 248 (382)
T KOG0032|consen 188 FIKP--------GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFL----------- 248 (382)
T ss_pred EccC--------CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHH-----------
Confidence 7653 235667899999999999999999999999999999999999999997654321111
Q ss_pred hccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCCCC
Q 005227 605 VIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKH 684 (707)
Q Consensus 605 ~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~H 684 (707)
++...=+..+ + ..++.....+.||+.+||..||.+|+||.++|+|
T Consensus 249 ------------------~i~~~~~~f~---~--------------~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~H 293 (382)
T KOG0032|consen 249 ------------------AILRGDFDFT---S--------------EPWDDISESAKDFIRKLLEFDPRKRLTAAQALQH 293 (382)
T ss_pred ------------------HHHcCCCCCC---C--------------CCccccCHHHHHHHHHhcccCcccCCCHHHHhcC
Confidence 1111101111 1 1223334556689999999999999999999999
Q ss_pred CCCCCCCCC
Q 005227 685 PYVSSDVSG 693 (707)
Q Consensus 685 p~f~~~~~~ 693 (707)
||+.+....
T Consensus 294 pWi~~~~~~ 302 (382)
T KOG0032|consen 294 PWIKSIGEA 302 (382)
T ss_pred ccccCCccc
Confidence 999887443
No 82
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=1.4e-39 Score=354.07 Aligned_cols=207 Identities=23% Similarity=0.323 Sum_probs=174.1
Q ss_pred CCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCCh---hhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEe
Q 005227 376 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 451 (707)
Q Consensus 376 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E 451 (707)
.|+..+.||+|+||+||+|... +++.||||++..... .....+.+|+++++.++|+||+++++++.+.+..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E 81 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence 5888999999999999999964 789999999875332 234568899999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCC
Q 005227 452 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 531 (707)
Q Consensus 452 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 531 (707)
|+++|+|.+++... ..+++..++.++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++.......
T Consensus 82 ~~~gg~L~~~l~~~--~~~~e~~~~~~~~qi~~aL~~LH~~g---ivHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~ 156 (381)
T cd05626 82 YIPGGDMMSLLIRM--EVFPEVLARFYIAELTLAIESVHKMG---FIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHN 156 (381)
T ss_pred cCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCC---eeecCCcHHHEEECCCCCEEEeeCcCCcccccccc
Confidence 99999999999654 35889999999999999999999998 99999999999999999999999999864321100
Q ss_pred CCc----------------------------------------cccceecccccCCCccchhhhccCCCCCchhhHHHHH
Q 005227 532 EGI----------------------------------------VPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGV 571 (707)
Q Consensus 532 ~~~----------------------------------------~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGv 571 (707)
... ..........||+.|+|||++.+..++.++|||||||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~ 236 (381)
T cd05626 157 SKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGV 236 (381)
T ss_pred cccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhh
Confidence 000 0000112356999999999999999999999999999
Q ss_pred HHHHHHcCCCCCCCCc
Q 005227 572 VFLELLTGMQPISHGK 587 (707)
Q Consensus 572 ll~elltG~~pf~~~~ 587 (707)
++|||++|+.||....
T Consensus 237 il~elltG~~Pf~~~~ 252 (381)
T cd05626 237 ILFEMLVGQPPFLAPT 252 (381)
T ss_pred HHHHHHhCCCCCcCCC
Confidence 9999999999997543
No 83
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-40 Score=345.81 Aligned_cols=265 Identities=29% Similarity=0.477 Sum_probs=228.0
Q ss_pred HHHHHHHhcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCe
Q 005227 367 YGEMALATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGE 445 (707)
Q Consensus 367 ~~~l~~~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~ 445 (707)
+++++....+....++||-|.||.||.|+|+ -.-.||||.++.+.++ .++|+.|+.+|+.++|||+|+++|+|..+-.
T Consensus 259 ~DkWEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtMe-veEFLkEAAvMKeikHpNLVqLLGVCT~EpP 337 (1157)
T KOG4278|consen 259 ADKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTHEPP 337 (1157)
T ss_pred cchhhccchheeeeeccCCCcccceeeeeeeccceeeehhhhhhcchh-HHHHHHHHHHHHhhcCccHHHHhhhhccCCC
Confidence 4677777778888999999999999999987 4678999999886554 4689999999999999999999999999999
Q ss_pred EEEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeeccccc
Q 005227 446 QMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRL 525 (707)
Q Consensus 446 ~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~ 525 (707)
.|||+|||..|+|.+||++..+..++....+.+|.||+.||+||..++ +|||||.++|+||.++..+||+|||++++
T Consensus 338 FYIiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkkn---FIHRDLAARNCLVgEnhiVKvADFGLsRl 414 (1157)
T KOG4278|consen 338 FYIITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHIVKVADFGLSRL 414 (1157)
T ss_pred eEEEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhh---hhhhhhhhhhccccccceEEeeccchhhh
Confidence 999999999999999999988888898899999999999999999988 99999999999999999999999999999
Q ss_pred CCCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHhhcccchh
Q 005227 526 APVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFS 604 (707)
Q Consensus 526 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~ 604 (707)
+..+.+..- ....-.+.|.|||-+....++.|+|||+|||+|||+.| |..||...+- . + .+.
T Consensus 415 MtgDTYTAH------AGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidl-S-q---------VY~ 477 (1157)
T KOG4278|consen 415 MTGDTYTAH------AGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDL-S-Q---------VYG 477 (1157)
T ss_pred hcCCceecc------cCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccH-H-H---------HHH
Confidence 865432211 11123578999999999999999999999999999999 8899864322 1 1 122
Q ss_pred hc-cCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhc
Q 005227 605 VI-DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNM 652 (707)
Q Consensus 605 ~~-~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~ 652 (707)
++ .+.+...|+.|+..++++|+.||+..|.+||+++|+-+.++.++..
T Consensus 478 LLEkgyRM~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtmf~~ 526 (1157)
T KOG4278|consen 478 LLEKGYRMDGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFETMFSS 526 (1157)
T ss_pred HHhccccccCCCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHHhcc
Confidence 22 2344567899999999999999999999999999999999877653
No 84
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-38 Score=326.89 Aligned_cols=268 Identities=27% Similarity=0.390 Sum_probs=204.2
Q ss_pred CCCccceEeeeCceEEEEEEeCCCcEEEEEEeccCChhhHHHHHHHHHHHHcc--CCCcceeEEEEEEeCC----eEEEE
Q 005227 376 NFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL--HHRNLVSLVGYCDEEG----EQMLV 449 (707)
Q Consensus 376 ~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l--~h~nIv~l~~~~~~~~----~~~lV 449 (707)
..+..+.||+|+||.||||.+. ++.||||++.. +..+.|..|-++++.. +|+||++|+++-.... +++||
T Consensus 211 pl~l~eli~~Grfg~V~KaqL~-~~~VAVKifp~---~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLV 286 (534)
T KOG3653|consen 211 PLQLLELIGRGRFGCVWKAQLD-NRLVAVKIFPE---QEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLV 286 (534)
T ss_pred chhhHHHhhcCccceeehhhcc-CceeEEEecCH---HHHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEE
Confidence 3445788999999999999994 59999999965 3445788888887764 8999999999875544 89999
Q ss_pred EecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCC------CCCeEecCCCCCCEEEcCCCcEEEeeeccc
Q 005227 450 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEA------DPPVFHRDIKASNILLDHKFTAKVADFGLS 523 (707)
Q Consensus 450 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~------~~~ivH~Dlkp~NILl~~~~~~kl~DFGla 523 (707)
+||.+.|+|.++|..+ .++|....+|+..+++||+|||+.. +|+|+|||||++||||.+|+++.|+|||+|
T Consensus 287 t~fh~kGsL~dyL~~n---tisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLA 363 (534)
T KOG3653|consen 287 TEFHPKGSLCDYLKAN---TISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLA 363 (534)
T ss_pred eeeccCCcHHHHHHhc---cccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeecccee
Confidence 9999999999999765 4899999999999999999999853 688999999999999999999999999999
Q ss_pred ccCCCCCCCCccccceecccccCCCccchhhhccCC-CC-----CchhhHHHHHHHHHHHcCCCCCCCCc--h----hHH
Q 005227 524 RLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHK-LT-----DKSDVYSLGVVFLELLTGMQPISHGK--N----IVR 591 (707)
Q Consensus 524 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~s-----~~sDVwSlGvll~elltG~~pf~~~~--~----~~~ 591 (707)
..+..... .......+||.+|||||++.+.. +. .+.||||+|.+||||+++...+..+. + ...
T Consensus 364 l~~~p~~~-----~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~ 438 (534)
T KOG3653|consen 364 LRLEPGKP-----QGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEA 438 (534)
T ss_pred EEecCCCC-----CcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhH
Confidence 98764432 22334578999999999998743 22 26899999999999999865553110 0 000
Q ss_pred HHHHHhhcccc--hhhccCCCCCCCh-----HHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCC
Q 005227 592 EVNIAYQSSMM--FSVIDGNMGSYPS-----ECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPE 655 (707)
Q Consensus 592 ~~~~~~~~~~~--~~~~~~~~~~~~~-----~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~ 655 (707)
.+-..-..+.+ .-+-++.++.+|+ ..+..+.+.+..||+.|++.|-|+.=+.+++.++....+.
T Consensus 439 evG~hPt~e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~~~~~ 509 (534)
T KOG3653|consen 439 EVGNHPTLEEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAELMMLWED 509 (534)
T ss_pred HhcCCCCHHHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhccCCc
Confidence 00000000001 1122233444444 3467889999999999999999999888888777654443
No 85
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=1.4e-39 Score=350.54 Aligned_cols=257 Identities=28% Similarity=0.423 Sum_probs=197.9
Q ss_pred CCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCCh-hhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEecC
Q 005227 376 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 453 (707)
Q Consensus 376 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~ 453 (707)
+|+..++||+|+||+||+|... +++.||||++..... ...+.+.+|+++++.++|+||+++++++...+..++||||+
T Consensus 75 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 154 (353)
T PLN00034 75 ELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEFM 154 (353)
T ss_pred HHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEecC
Confidence 3456788999999999999965 789999999865432 23467899999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCCC
Q 005227 454 SNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEG 533 (707)
Q Consensus 454 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 533 (707)
++|+|.+. ....+..+..++.||+.||+|||+.+ |+||||||+|||+++++.+||+|||+++......
T Consensus 155 ~~~~L~~~------~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~--- 222 (353)
T PLN00034 155 DGGSLEGT------HIADEQFLADVARQILSGIAYLHRRH---IVHRDIKPSNLLINSAKNVKIADFGVSRILAQTM--- 222 (353)
T ss_pred CCCccccc------ccCCHHHHHHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEcCCCCEEEcccccceeccccc---
Confidence 99998643 23567788899999999999999998 9999999999999999999999999998653221
Q ss_pred ccccceecccccCCCccchhhhcc-----CCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccC
Q 005227 534 IVPAHVSTVVKGTPGYLDPEYFLT-----HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDG 608 (707)
Q Consensus 534 ~~~~~~~~~~~gt~~y~aPE~~~~-----~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 608 (707)
.......||..|+|||++.. ...+.++|||||||++|||++|+.||...... ++
T Consensus 223 ----~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~-~~---------------- 281 (353)
T PLN00034 223 ----DPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQG-DW---------------- 281 (353)
T ss_pred ----ccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCc-cH----------------
Confidence 11223468999999998743 23456899999999999999999999632210 00
Q ss_pred CCCCCChHHHHHHHHHHHH-hcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCCCCCCC
Q 005227 609 NMGSYPSECVEKFIKLALK-CCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYV 687 (707)
Q Consensus 609 ~~~~~~~~~~~~l~~l~~~-c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f 687 (707)
..++.. +....+. .+ ......+.+||.+||..||++|+|++|+|+||||
T Consensus 282 -------------~~~~~~~~~~~~~~-~~----------------~~~~~~l~~li~~~l~~~P~~Rpt~~ell~hp~~ 331 (353)
T PLN00034 282 -------------ASLMCAICMSQPPE-AP----------------ATASREFRHFISCCLQREPAKRWSAMQLLQHPFI 331 (353)
T ss_pred -------------HHHHHHHhccCCCC-CC----------------CccCHHHHHHHHHHccCChhhCcCHHHHhcCccc
Confidence 000000 1111111 00 1112234578888999999999999999999999
Q ss_pred CCCCCCCC
Q 005227 688 SSDVSGSN 695 (707)
Q Consensus 688 ~~~~~~~~ 695 (707)
.......+
T Consensus 332 ~~~~~~~~ 339 (353)
T PLN00034 332 LRAQPGQG 339 (353)
T ss_pred ccCCcccc
Confidence 88766544
No 86
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=1.5e-39 Score=346.67 Aligned_cols=192 Identities=26% Similarity=0.394 Sum_probs=167.5
Q ss_pred ceEeeeCceEEEEEEeC-CCcEEEEEEeccCCh---hhHHHHHHHHHHHHcc-CCCcceeEEEEEEeCCeEEEEEecCCC
Q 005227 381 TQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQMLVYEFMSN 455 (707)
Q Consensus 381 ~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lV~E~~~~ 455 (707)
+.||+|+||.||+|... +++.||||+++.... ...+.+.+|..++..+ +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 46999999999999965 689999999975322 2234578899999998 799999999999999999999999999
Q ss_pred CCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCCCcc
Q 005227 456 GTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIV 535 (707)
Q Consensus 456 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 535 (707)
|+|.+++... ..+++..++.++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 81 g~L~~~~~~~--~~l~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~------ 149 (329)
T cd05588 81 GDLMFHMQRQ--RKLPEEHARFYSAEISLALNFLHERG---IIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRP------ 149 (329)
T ss_pred CCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEECCCCCEEECcCccccccccC------
Confidence 9999988654 35899999999999999999999998 999999999999999999999999998742211
Q ss_pred ccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCC
Q 005227 536 PAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPIS 584 (707)
Q Consensus 536 ~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~ 584 (707)
........||+.|+|||++.+..++.++|||||||++|||++|+.||.
T Consensus 150 -~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~ 197 (329)
T cd05588 150 -GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 197 (329)
T ss_pred -CCccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcc
Confidence 112234578999999999999999999999999999999999999995
No 87
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=2e-39 Score=333.75 Aligned_cols=250 Identities=37% Similarity=0.593 Sum_probs=200.7
Q ss_pred ccceEeeeCceEEEEEEeC-----CCcEEEEEEeccCCh-hhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEec
Q 005227 379 SSTQIGQGGYGKVYKGILP-----DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 452 (707)
Q Consensus 379 ~~~~lG~G~fg~Vy~~~~~-----~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~ 452 (707)
..+.||.|.||.||+|.+. .+..|+||.++.... ...+.+.+|++.+++++||||++++|++...+..++||||
T Consensus 3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~ 82 (259)
T PF07714_consen 3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEY 82 (259)
T ss_dssp EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE-
T ss_pred EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccccccccccccccccccccccccccc
Confidence 4678999999999999976 357899999966433 3467899999999999999999999999988889999999
Q ss_pred CCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCC
Q 005227 453 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 532 (707)
Q Consensus 453 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 532 (707)
+++|+|.++|+......+++..+..|+.||++||+|||+.+ ++|+||+++||++++++.+||+|||++........
T Consensus 83 ~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~---iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~- 158 (259)
T PF07714_consen 83 CPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNN---IIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSK- 158 (259)
T ss_dssp -TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTT---EEEST-SGGGEEEETTTEEEEESTTTGEETTTSSS-
T ss_pred ccccccccccccccccccccccccccccccccccccccccc---ccccccccccccccccccccccccccccccccccc-
Confidence 99999999998876677999999999999999999999998 99999999999999999999999999987632211
Q ss_pred CccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHhhcccchhhccCCCC
Q 005227 533 GIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 611 (707)
Q Consensus 533 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 611 (707)
............|+|||.+.+..++.++||||||+++|||++ |+.||..... .+.... +.++...
T Consensus 159 ----~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~-~~~~~~---------~~~~~~~ 224 (259)
T PF07714_consen 159 ----YKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDN-EEIIEK---------LKQGQRL 224 (259)
T ss_dssp ----EEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCH-HHHHHH---------HHTTEET
T ss_pred ----ccccccccccccccccccccccccccccccccccccccccccccccccccccc-cccccc---------ccccccc
Confidence 122233446778999999999999999999999999999999 7788865432 221111 1222233
Q ss_pred CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 005227 612 SYPSECVEKFIKLALKCCQDETDARPSMSEVMREL 646 (707)
Q Consensus 612 ~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L 646 (707)
..+..++..+.+++..||+.+|++||++.++++.|
T Consensus 225 ~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 225 PIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp TSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred eeccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 45566788899999999999999999999999875
No 88
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=1.1e-38 Score=336.39 Aligned_cols=261 Identities=27% Similarity=0.430 Sum_probs=203.9
Q ss_pred hcCCCccceEeeeCceEEEEEEeCC-----------------CcEEEEEEeccCCh-hhHHHHHHHHHHHHccCCCccee
Q 005227 374 TNNFNSSTQIGQGGYGKVYKGILPD-----------------GTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVS 435 (707)
Q Consensus 374 ~~~~~~~~~lG~G~fg~Vy~~~~~~-----------------~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~nIv~ 435 (707)
.++|...++||+|+||.||+|.+++ +..||+|.+..... ....++.+|++++++++||||++
T Consensus 4 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 83 (304)
T cd05096 4 RGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIR 83 (304)
T ss_pred hhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeE
Confidence 3578889999999999999998532 34799999876432 33567999999999999999999
Q ss_pred EEEEEEeCCeEEEEEecCCCCCHHHHHhhcC-----------------CCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeE
Q 005227 436 LVGYCDEEGEQMLVYEFMSNGTLRDQLSAKS-----------------KEPLGFAMRLSIALGSSRGILYLHTEADPPVF 498 (707)
Q Consensus 436 l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~-----------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iv 498 (707)
+++++.+.+..++||||+++|+|.+++.... ...+++..++.++.||+.||+|||+.+ |+
T Consensus 84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~---iv 160 (304)
T cd05096 84 LLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLN---FV 160 (304)
T ss_pred EEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCC---cc
Confidence 9999999999999999999999999986532 124688899999999999999999998 99
Q ss_pred ecCCCCCCEEEcCCCcEEEeeecccccCCCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc
Q 005227 499 HRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT 578 (707)
Q Consensus 499 H~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~ellt 578 (707)
||||||+|||+++++.+||+|||+++.....+. ........++..|+|||++.+..++.++|||||||++|||++
T Consensus 161 H~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~ 235 (304)
T cd05096 161 HRDLATRNCLVGENLTIKIADFGMSRNLYAGDY-----YRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILM 235 (304)
T ss_pred ccCcchhheEEcCCccEEECCCccceecccCce-----eEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHH
Confidence 999999999999999999999999976543221 111223345788999999999999999999999999999997
Q ss_pred --CCCCCCCCchh--HHHHHHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 005227 579 --GMQPISHGKNI--VREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELE 647 (707)
Q Consensus 579 --G~~pf~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~ 647 (707)
+..||...... .......... .........+..++..+.+++.+||+.+|.+||++.++.+.|+
T Consensus 236 ~~~~~p~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~ 303 (304)
T cd05096 236 LCKEQPYGELTDEQVIENAGEFFRD-----QGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLT 303 (304)
T ss_pred ccCCCCCCcCCHHHHHHHHHHHhhh-----ccccccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHh
Confidence 55677543321 1111111100 0001111223456678999999999999999999999988775
No 89
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-40 Score=338.36 Aligned_cols=249 Identities=27% Similarity=0.388 Sum_probs=213.5
Q ss_pred hcCCCccceEeeeCceEEEEEEe-CCCcEEEEEEeccCChhh-HHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEe
Q 005227 374 TNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQG-EKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 451 (707)
Q Consensus 374 ~~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~-~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E 451 (707)
...|+..+.||+|.||.||+|.. +.++.||+|++....... .+++.+|+.++.+++++||.++|+.+..+..++++||
T Consensus 12 ~~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMe 91 (467)
T KOG0201|consen 12 ELLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIME 91 (467)
T ss_pred ccccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHH
Confidence 45677889999999999999996 478999999998655444 4678999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCC
Q 005227 452 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 531 (707)
Q Consensus 452 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 531 (707)
||.+|++.+.++.. ..+.+..+..+.++++.||.|||.++ .+|||||+.|||+..+|.+|++|||.+-......
T Consensus 92 y~~gGsv~~lL~~~--~~~~E~~i~~ilre~l~~l~ylH~~~---kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~- 165 (467)
T KOG0201|consen 92 YCGGGSVLDLLKSG--NILDEFEIAVILREVLKGLDYLHSEK---KIHRDIKAANILLSESGDVKLADFGVAGQLTNTV- 165 (467)
T ss_pred HhcCcchhhhhccC--CCCccceeeeehHHHHHHhhhhhhcc---eecccccccceeEeccCcEEEEecceeeeeechh-
Confidence 99999999999543 34588888899999999999999999 9999999999999999999999999998765432
Q ss_pred CCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCCCC
Q 005227 532 EGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 611 (707)
Q Consensus 532 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 611 (707)
.......||+.|||||++.+..|+.|+||||||++.+||.+|.+|+..-.. +..++.+.....+
T Consensus 166 ------~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hP----------mrvlflIpk~~PP 229 (467)
T KOG0201|consen 166 ------KRRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHP----------MRVLFLIPKSAPP 229 (467)
T ss_pred ------hccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCc----------ceEEEeccCCCCC
Confidence 223567899999999999999999999999999999999999999975432 2233333333344
Q ss_pred CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005227 612 SYPSECVEKFIKLALKCCQDETDARPSMSEVMR 644 (707)
Q Consensus 612 ~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~ 644 (707)
.....+...+.+++..|++++|+.||++.++++
T Consensus 230 ~L~~~~S~~~kEFV~~CL~k~P~~RpsA~~LLK 262 (467)
T KOG0201|consen 230 RLDGDFSPPFKEFVEACLDKNPEFRPSAKELLK 262 (467)
T ss_pred ccccccCHHHHHHHHHHhhcCcccCcCHHHHhh
Confidence 455678888999999999999999999999875
No 90
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=5.9e-40 Score=353.13 Aligned_cols=208 Identities=26% Similarity=0.342 Sum_probs=178.1
Q ss_pred cCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCCh---hhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEE
Q 005227 375 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 450 (707)
Q Consensus 375 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~ 450 (707)
++|++.+.||+|+||+||+|... +++.||||++..... .....+.+|++++..++|+||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM 80 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence 47889999999999999999975 789999999875322 23456889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCC
Q 005227 451 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 530 (707)
Q Consensus 451 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~ 530 (707)
||+++++|.+++... ..+++..++.++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||++.......
T Consensus 81 e~~~~~~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~g---iiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~ 155 (350)
T cd05573 81 EYMPGGDLMNLLIRK--DVFPEETARFYIAELVLALDSVHKLG---FIHRDIKPDNILIDADGHIKLADFGLCKKMNKAK 155 (350)
T ss_pred cCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCCCCEEeecCCCCccCcccC
Confidence 999999999999765 46899999999999999999999988 9999999999999999999999999997654322
Q ss_pred CC----------------------CccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCc
Q 005227 531 IE----------------------GIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 587 (707)
Q Consensus 531 ~~----------------------~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~~ 587 (707)
.. ............||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~ 234 (350)
T cd05573 156 DREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDT 234 (350)
T ss_pred cccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCC
Confidence 00 0000112234568999999999999999999999999999999999999997544
No 91
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=4e-39 Score=347.29 Aligned_cols=288 Identities=19% Similarity=0.283 Sum_probs=201.9
Q ss_pred HhcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEe
Q 005227 373 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 451 (707)
Q Consensus 373 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E 451 (707)
...+|++.+.||+|+||.||+|... +++.||+|+.... ....|+.++++++|+||+++++++......++|||
T Consensus 64 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 137 (357)
T PHA03209 64 ASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLP 137 (357)
T ss_pred hhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEE
Confidence 3457999999999999999999975 5788999975432 23568999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCC
Q 005227 452 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 531 (707)
Q Consensus 452 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 531 (707)
|+ .++|.+++... ...+++..++.++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 138 ~~-~~~l~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~-- 210 (357)
T PHA03209 138 HY-SSDLYTYLTKR-SRPLPIDQALIIEKQILEGLRYLHAQR---IIHRDVKTENIFINDVDQVCIGDLGAAQFPVVA-- 210 (357)
T ss_pred cc-CCcHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEEecCccccccccC--
Confidence 99 56898888654 346899999999999999999999998 999999999999999999999999999753211
Q ss_pred CCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhH-HHHHHHhhcccchhhcc---
Q 005227 532 EGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIV-REVNIAYQSSMMFSVID--- 607 (707)
Q Consensus 532 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~-~~~~~~~~~~~~~~~~~--- 607 (707)
.......||..|+|||++.+..++.++|||||||++|||+++..++....... ..... .....+..++.
T Consensus 211 ------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~-~~~~~l~~~~~~~~ 283 (357)
T PHA03209 211 ------PAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVK-SCHSHLLKIISTLK 283 (357)
T ss_pred ------cccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHH-HHHHHHHHHHHHhc
Confidence 11234568999999999999999999999999999999999666553321110 00000 00000000000
Q ss_pred CCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCCCCCCC
Q 005227 608 GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYV 687 (707)
Q Consensus 608 ~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f 687 (707)
.....++.+....+ ....+......|..... ...++ .........+||.+||+.||++||||+|+|+||||
T Consensus 284 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~-~~~~~-----~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~hp~f 354 (357)
T PHA03209 284 VHPEEFPRDPGSRL---VRGFIEYASLERQPYTR-YPCFQ-----RVNLPIDGEFLVHKMLTFDAAMRPSAEEILNYPMF 354 (357)
T ss_pred cChhhcCCCCccHH---HHHHHhhcccCCCcccc-cHHHh-----ccCCCchHHHHHHHHHcCCcccCcCHHHHhcCchh
Confidence 00000110000000 00001111111110000 00011 01223445679999999999999999999999999
Q ss_pred CC
Q 005227 688 SS 689 (707)
Q Consensus 688 ~~ 689 (707)
..
T Consensus 355 ~~ 356 (357)
T PHA03209 355 AQ 356 (357)
T ss_pred cc
Confidence 75
No 92
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=3.5e-39 Score=343.25 Aligned_cols=200 Identities=23% Similarity=0.365 Sum_probs=171.3
Q ss_pred CCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCC---hhhHHHHHHHHHHHHccCC-CcceeEEEEEEeCCeEEEEE
Q 005227 376 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHH-RNLVSLVGYCDEEGEQMLVY 450 (707)
Q Consensus 376 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h-~nIv~l~~~~~~~~~~~lV~ 450 (707)
+|+..+.||+|+||.||+|..+ +++.||||++.... ....+.+..|.+++..++| ++|+++++++...+..++||
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 80 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence 4788999999999999999965 67899999987532 2234567889999999976 46888999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCC
Q 005227 451 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 530 (707)
Q Consensus 451 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~ 530 (707)
||+++|+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||+++++.+||+|||+++.....
T Consensus 81 E~~~~g~L~~~~~~~--~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~- 154 (324)
T cd05587 81 EYVNGGDLMYHIQQV--GKFKEPHAVFYAAEIAIGLFFLHSKG---IIYRDLKLDNVMLDAEGHIKIADFGMCKENIFG- 154 (324)
T ss_pred cCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEEcCCCCEEEeecCcceecCCC-
Confidence 999999999999654 34889999999999999999999998 999999999999999999999999998743211
Q ss_pred CCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCc
Q 005227 531 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 587 (707)
Q Consensus 531 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~~ 587 (707)
........||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 155 ------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~ 205 (324)
T cd05587 155 ------GKTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGED 205 (324)
T ss_pred ------CCceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCC
Confidence 112234568999999999999999999999999999999999999996543
No 93
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=1e-39 Score=348.27 Aligned_cols=203 Identities=26% Similarity=0.349 Sum_probs=175.5
Q ss_pred cCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCCh---hhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEE
Q 005227 375 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 450 (707)
Q Consensus 375 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~ 450 (707)
++|++.+.||+|+||+||+|... +++.||+|++..... ...+.+.+|+.+++.++|+||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM 80 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence 46889999999999999999965 789999999875322 23456889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCC
Q 005227 451 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 530 (707)
Q Consensus 451 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~ 530 (707)
||+++|+|.+++... ...+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||++.......
T Consensus 81 e~~~~~~L~~~l~~~-~~~l~~~~~~~~~~qi~~aL~~lH~~~---i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~ 156 (330)
T cd05601 81 EYQPGGDLLSLLNRY-EDQFDEDMAQFYLAELVLAIHSVHQMG---YVHRDIKPENVLIDRTGHIKLADFGSAARLTANK 156 (330)
T ss_pred CCCCCCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEcccCchHheEECCCCCEEeccCCCCeECCCCC
Confidence 999999999999764 246899999999999999999999998 9999999999999999999999999998654322
Q ss_pred CCCccccceecccccCCCccchhhhc------cCCCCCchhhHHHHHHHHHHHcCCCCCCCCc
Q 005227 531 IEGIVPAHVSTVVKGTPGYLDPEYFL------THKLTDKSDVYSLGVVFLELLTGMQPISHGK 587 (707)
Q Consensus 531 ~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~s~~sDVwSlGvll~elltG~~pf~~~~ 587 (707)
........||+.|+|||++. ...++.++|||||||++|||++|+.||....
T Consensus 157 ------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~ 213 (330)
T cd05601 157 ------MVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGT 213 (330)
T ss_pred ------ceeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCC
Confidence 11223346899999999987 4567889999999999999999999996543
No 94
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=1.5e-39 Score=354.27 Aligned_cols=207 Identities=22% Similarity=0.307 Sum_probs=173.8
Q ss_pred CCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCCh---hhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEe
Q 005227 376 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 451 (707)
Q Consensus 376 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E 451 (707)
+|+..++||+|+||+||+|+.. +++.||+|++..... .....+.+|++++++++|+||+++++++.+.+..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E 81 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 81 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence 5888999999999999999964 788999999875322 223568899999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCC
Q 005227 452 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 531 (707)
Q Consensus 452 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 531 (707)
|+++|+|.+++.+. ..+++..++.++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++.......
T Consensus 82 ~~~gg~L~~~l~~~--~~~~e~~~~~~~~qi~~al~~lH~~~---ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~ 156 (382)
T cd05625 82 YIPGGDMMSLLIRM--GIFPEDLARFYIAELTCAVESVHKMG---FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHD 156 (382)
T ss_pred CCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEEeECCCCcccccccc
Confidence 99999999999654 35888999999999999999999998 99999999999999999999999999854321000
Q ss_pred CC----------------------------------------ccccceecccccCCCccchhhhccCCCCCchhhHHHHH
Q 005227 532 EG----------------------------------------IVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGV 571 (707)
Q Consensus 532 ~~----------------------------------------~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGv 571 (707)
.. ...........||+.|+|||++.+..++.++|||||||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGv 236 (382)
T cd05625 157 SKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGV 236 (382)
T ss_pred ccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechH
Confidence 00 00000112346899999999999999999999999999
Q ss_pred HHHHHHcCCCCCCCCc
Q 005227 572 VFLELLTGMQPISHGK 587 (707)
Q Consensus 572 ll~elltG~~pf~~~~ 587 (707)
++|||++|+.||....
T Consensus 237 il~elltG~~Pf~~~~ 252 (382)
T cd05625 237 ILYEMLVGQPPFLAQT 252 (382)
T ss_pred HHHHHHhCCCCCCCCC
Confidence 9999999999997543
No 95
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=4.7e-39 Score=347.97 Aligned_cols=290 Identities=20% Similarity=0.290 Sum_probs=212.3
Q ss_pred HhcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCC--hhhHHHHHHHHHHHHccCCCcceeEEEEEEeC------
Q 005227 373 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE------ 443 (707)
Q Consensus 373 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~------ 443 (707)
..++|...+.||+|+||.||+|... .++.||||++.... ....+.+.+|+.+++.++||||+++++++...
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~ 101 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 101 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeeccccccccc
Confidence 3578999999999999999999964 68899999987532 23346788999999999999999999987543
Q ss_pred CeEEEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeeccc
Q 005227 444 GEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLS 523 (707)
Q Consensus 444 ~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla 523 (707)
...++||||++ ++|.+.+.. .+++..+..++.|+++||+|||+++ |+||||||+|||++.++.+||+|||++
T Consensus 102 ~~~~lv~e~~~-~~l~~~~~~----~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~DfG~a 173 (364)
T cd07875 102 QDVYIVMELMD-ANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLA 173 (364)
T ss_pred CeEEEEEeCCC-CCHHHHHHh----cCCHHHHHHHHHHHHHHHHHHhhCC---eecCCCCHHHEEECCCCcEEEEeCCCc
Confidence 35799999996 578777743 3788999999999999999999998 999999999999999999999999999
Q ss_pred ccCCCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccch
Q 005227 524 RLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMF 603 (707)
Q Consensus 524 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~ 603 (707)
+..... .......||..|+|||++.+..++.++|||||||++|||++|+.||........+... ..
T Consensus 174 ~~~~~~--------~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~-~~----- 239 (364)
T cd07875 174 RTAGTS--------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKV-IE----- 239 (364)
T ss_pred cccCCC--------CcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHH-HH-----
Confidence 765321 1123346899999999999999999999999999999999999999765443222111 10
Q ss_pred hhccCCCCCCChHHHHHHHHHHHHhcccCCCCC-CCHHHHHHHHH-Hh-hhcCCCCCCCCCccccCCCCCCCCCCCCCCc
Q 005227 604 SVIDGNMGSYPSECVEKFIKLALKCCQDETDAR-PSMSEVMRELE-SI-WNMMPESDTKTPEFINSEHTSKEETPPSSSS 680 (707)
Q Consensus 604 ~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~R-Pt~~~v~~~L~-~~-~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e 680 (707)
..+....+....+...+.......|... .++.++..... .. .......+..+.|||.+||+.||++|+|++|
T Consensus 240 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e 314 (364)
T cd07875 240 -----QLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDE 314 (364)
T ss_pred -----hcCCCCHHHHHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHH
Confidence 1111223333333333333333222211 12222111100 00 0001112334578999999999999999999
Q ss_pred CCCCCCCCC
Q 005227 681 MLKHPYVSS 689 (707)
Q Consensus 681 ~L~Hp~f~~ 689 (707)
+|+||||..
T Consensus 315 ~L~hp~~~~ 323 (364)
T cd07875 315 ALQHPYINV 323 (364)
T ss_pred HhcCccccc
Confidence 999999964
No 96
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=2e-39 Score=345.06 Aligned_cols=238 Identities=24% Similarity=0.389 Sum_probs=186.4
Q ss_pred CCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCCh---hhHHHHHHHHHHH---HccCCCcceeEEEEEEeCCeEEEE
Q 005227 377 FNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFL---SRLHHRNLVSLVGYCDEEGEQMLV 449 (707)
Q Consensus 377 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~---~~~~~~~~E~~~l---~~l~h~nIv~l~~~~~~~~~~~lV 449 (707)
|++.+.||+|+||.||+|... +++.||||++..... ...+.+.+|++++ +.++||||+++++++...+..++|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 667899999999999999965 689999999875321 2234566676655 566899999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCC
Q 005227 450 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 529 (707)
Q Consensus 450 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~ 529 (707)
|||+++++|..+++. ..+++..++.++.|++.||+|||+.+ |+||||||+||++++++.+||+|||+++.....
T Consensus 81 ~E~~~~~~L~~~~~~---~~l~~~~~~~~~~qi~~al~~lH~~~---ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~ 154 (324)
T cd05589 81 MEYAAGGDLMMHIHT---DVFSEPRAVFYAACVVLGLQYLHENK---IVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGF 154 (324)
T ss_pred EcCCCCCcHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHhCC---eEecCCCHHHeEECCCCcEEeCcccCCccCCCC
Confidence 999999999988854 35899999999999999999999998 999999999999999999999999998743221
Q ss_pred CCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCC
Q 005227 530 DIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGN 609 (707)
Q Consensus 530 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 609 (707)
........|++.|+|||++.+..++.++|||||||++|||++|+.||...... +..... .. .
T Consensus 155 -------~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~-~~~~~i---------~~-~ 216 (324)
T cd05589 155 -------GDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEE-EVFDSI---------VN-D 216 (324)
T ss_pred -------CCcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHH-HHHHHH---------Hh-C
Confidence 11223456899999999999999999999999999999999999999754321 111110 00 1
Q ss_pred CCCCChHHHHHHHHHHHHhcccCCCCCCC
Q 005227 610 MGSYPSECVEKFIKLALKCCQDETDARPS 638 (707)
Q Consensus 610 ~~~~~~~~~~~l~~l~~~c~~~~p~~RPt 638 (707)
...+|...+..+.+++.+|++.+|.+||+
T Consensus 217 ~~~~p~~~~~~~~~li~~~L~~dP~~R~~ 245 (324)
T cd05589 217 EVRYPRFLSREAISIMRRLLRRNPERRLG 245 (324)
T ss_pred CCCCCCCCCHHHHHHHHHHhhcCHhHcCC
Confidence 11233344555666667777777777764
No 97
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=4.2e-39 Score=341.25 Aligned_cols=283 Identities=22% Similarity=0.326 Sum_probs=208.8
Q ss_pred ceEeeeCceEEEEEEeC-CCcEEEEEEeccCCh---hhHHHHHHHHHHHHcc-CCCcceeEEEEEEeCCeEEEEEecCCC
Q 005227 381 TQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQMLVYEFMSN 455 (707)
Q Consensus 381 ~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lV~E~~~~ 455 (707)
+.||+|+||+||+|... +++.||||++..... .....+..|..+++.. +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 46999999999999975 578999999875321 2234566788888764 899999999999999999999999999
Q ss_pred CCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCCCcc
Q 005227 456 GTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIV 535 (707)
Q Consensus 456 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 535 (707)
|+|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||+++......
T Consensus 81 g~L~~~l~~~--~~~~~~~~~~~~~qi~~al~~LH~~~---ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~----- 150 (316)
T cd05619 81 GDLMFHIQSC--HKFDLPRATFYAAEIICGLQFLHSKG---IVYRDLKLDNILLDTDGHIKIADFGMCKENMLGD----- 150 (316)
T ss_pred CcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCC---eEeCCCCHHHEEECCCCCEEEccCCcceECCCCC-----
Confidence 9999999653 35889999999999999999999998 9999999999999999999999999987532211
Q ss_pred ccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCCCCCCCh
Q 005227 536 PAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPS 615 (707)
Q Consensus 536 ~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 615 (707)
.......||..|+|||++.+..++.++|||||||++|||++|+.||...... ...... ......++.
T Consensus 151 --~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~-~~~~~i----------~~~~~~~~~ 217 (316)
T cd05619 151 --AKTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEE-ELFQSI----------RMDNPCYPR 217 (316)
T ss_pred --CceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHH-HHHHHH----------HhCCCCCCc
Confidence 1223456899999999999999999999999999999999999999654321 111111 001112333
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCCCCCCCCCCCCCC
Q 005227 616 ECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSSDVSGS 694 (707)
Q Consensus 616 ~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f~~~~~~~ 694 (707)
.....+.+++.+|++.+|++||++.+.+.... .+...+ ...+ .-..++|.-++...+...+.||.......
T Consensus 218 ~~~~~~~~li~~~l~~~P~~R~~~~~~l~~h~----~~~~~~---~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (316)
T cd05619 218 WLTREAKDILVKLFVREPERRLGVKGDIRQHP----FFREID---WSAL-EEREIEPPFKPKVKSANDCSNFDKEFLNE 288 (316)
T ss_pred cCCHHHHHHHHHHhccCHhhcCCChHHHHcCc----ccCCCC---HHHH-HhCCCCCCcCCCCCCccchhhcChhhhcC
Confidence 45566778888888888888888752221100 000000 0001 11234566677777777777876655533
No 98
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.4e-39 Score=341.11 Aligned_cols=251 Identities=25% Similarity=0.413 Sum_probs=219.0
Q ss_pred cCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCCh--hhHHHHHHHHHHHHccCCCcceeEEEEEEeCCe-EEEEE
Q 005227 375 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGE-QMLVY 450 (707)
Q Consensus 375 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~-~~lV~ 450 (707)
++|...+.+|+|+||.++..+++ +++.|++|.+..... ..+....+|+.++++++|||||.+.+.|..++. .+|||
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm 83 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVM 83 (426)
T ss_pred chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEE
Confidence 57888999999999999999965 678999998875433 234478899999999999999999999998888 99999
Q ss_pred ecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCC
Q 005227 451 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 530 (707)
Q Consensus 451 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~ 530 (707)
+|++||++.+.+.+.....+++..+..++.|++.|+.|||++. |+|||||+.||+++.+..|||+|||+|+.+...+
T Consensus 84 ~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~---iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~ 160 (426)
T KOG0589|consen 84 EYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENR---VLHRDLKCANIFLTKDKKVKLGDFGLAKILNPED 160 (426)
T ss_pred eecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhh---hhcccchhhhhhccccCceeecchhhhhhcCCch
Confidence 9999999999999877778999999999999999999999888 9999999999999999999999999999886543
Q ss_pred CCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCCC
Q 005227 531 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 610 (707)
Q Consensus 531 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 610 (707)
.......||+.|+.||++.+.+|..|+|||||||++|||++-+++|...+- ...+ ..+.....
T Consensus 161 -------~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m-~~Li---------~ki~~~~~ 223 (426)
T KOG0589|consen 161 -------SLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNM-SELI---------LKINRGLY 223 (426)
T ss_pred -------hhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccch-HHHH---------HHHhhccC
Confidence 234567899999999999999999999999999999999999999964332 2222 22333345
Q ss_pred CCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005227 611 GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRE 645 (707)
Q Consensus 611 ~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~ 645 (707)
.+.|..+..++..++..|++.+|..||++.+++.+
T Consensus 224 ~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 224 SPLPSMYSSELRSLVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred CCCCccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence 56788899999999999999999999999999875
No 99
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=6.3e-39 Score=330.19 Aligned_cols=256 Identities=25% Similarity=0.434 Sum_probs=210.9
Q ss_pred HhcCCCccceEeeeCceEEEEEEeCCCcEEEEEEeccCChhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEec
Q 005227 373 ATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 452 (707)
Q Consensus 373 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~ 452 (707)
..++|++.++||+|+||+||+|...++..||+|.+.... ...+.+.+|+.++++++|+||+++++++...+..++||||
T Consensus 4 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 82 (261)
T cd05072 4 PRESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEY 82 (261)
T ss_pred chHHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCc-hhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEec
Confidence 346788999999999999999998888899999987533 2356889999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCC
Q 005227 453 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 532 (707)
Q Consensus 453 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 532 (707)
+++++|.++++......+++..++.++.|+++||+|||+.+ ++||||||+||++++++.+||+|||+++......
T Consensus 83 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~---i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~-- 157 (261)
T cd05072 83 MAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKN---YIHRDLRAANVLVSESLMCKIADFGLARVIEDNE-- 157 (261)
T ss_pred CCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccchhhEEecCCCcEEECCCccceecCCCc--
Confidence 99999999998765667899999999999999999999988 9999999999999999999999999998654321
Q ss_pred CccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHhhcccchhhccCCCC
Q 005227 533 GIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 611 (707)
Q Consensus 533 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 611 (707)
........++..|+|||++.+..++.++|||||||++|||++ |+.||....... ..... . .....
T Consensus 158 ----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~-~~~~~-~--------~~~~~ 223 (261)
T cd05072 158 ----YTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSD-VMSAL-Q--------RGYRM 223 (261)
T ss_pred ----eeccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHH-HHHHH-H--------cCCCC
Confidence 011122345678999999998899999999999999999998 999986543211 11111 1 11111
Q ss_pred CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 005227 612 SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELES 648 (707)
Q Consensus 612 ~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~ 648 (707)
+.+..++..+.+++.+|++.+|++||++.++.+.|++
T Consensus 224 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 260 (261)
T cd05072 224 PRMENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDD 260 (261)
T ss_pred CCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 2233456778999999999999999999999998875
No 100
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=3e-39 Score=356.95 Aligned_cols=267 Identities=22% Similarity=0.342 Sum_probs=217.9
Q ss_pred HhcCCCccceEeeeCceEEEEEEeCCC-cEEEEEEeccCChhhHHHHHHHHHHHHccC-CCcceeEEEEE-Ee------C
Q 005227 373 ATNNFNSSTQIGQGGYGKVYKGILPDG-TVVAVKRAQEGSLQGEKEFLTEIQFLSRLH-HRNLVSLVGYC-DE------E 443 (707)
Q Consensus 373 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~-~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~-~~------~ 443 (707)
...++++.+.|.+|||+.||.|....+ ..||+|++...+....+.+.+|+++|+.|+ |+|||.+++.. .. .
T Consensus 35 g~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~ 114 (738)
T KOG1989|consen 35 GSHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGV 114 (738)
T ss_pred CCEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCce
Confidence 445677899999999999999997655 999999998877777888999999999996 99999999932 11 1
Q ss_pred CeEEEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeeccc
Q 005227 444 GEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLS 523 (707)
Q Consensus 444 ~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla 523 (707)
-+.+|.||||.+|.|-|++..+-...|++.++++|+.|+++|+++||.. ++||||||||-+||||+.++..||||||.|
T Consensus 115 ~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~-~pPiIHRDLKiENvLls~~g~~KLCDFGSa 193 (738)
T KOG1989|consen 115 WEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYL-KPPIIHRDLKIENVLLSADGNYKLCDFGSA 193 (738)
T ss_pred eEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcC-CCccchhhhhhhheEEcCCCCEEeCccccc
Confidence 3678999999999999999876666699999999999999999999987 588999999999999999999999999998
Q ss_pred ccCCCCC--CCCccccceecccccCCCccchhhh---ccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhh
Q 005227 524 RLAPVPD--IEGIVPAHVSTVVKGTPGYLDPEYF---LTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQ 598 (707)
Q Consensus 524 ~~~~~~~--~~~~~~~~~~~~~~gt~~y~aPE~~---~~~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~ 598 (707)
.-....- .....-........-|+.|+|||.+ .+.++++|+|||||||+||-|+....||+....
T Consensus 194 tt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~---------- 263 (738)
T KOG1989|consen 194 TTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGK---------- 263 (738)
T ss_pred ccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcc----------
Confidence 6432111 0000000011123468999999987 467899999999999999999999999976533
Q ss_pred cccchhhccCCCCCC-ChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCC
Q 005227 599 SSMMFSVIDGNMGSY-PSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMP 654 (707)
Q Consensus 599 ~~~~~~~~~~~~~~~-~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~ 654 (707)
..++.+...-. ...+...+..||..|++.+|++||++-+|+..+..+...-.
T Consensus 264 ----laIlng~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~~~~ 316 (738)
T KOG1989|consen 264 ----LAILNGNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELANKPC 316 (738)
T ss_pred ----eeEEeccccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhcCCC
Confidence 34444444332 25899999999999999999999999999999988876443
No 101
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=4.3e-39 Score=355.69 Aligned_cols=277 Identities=21% Similarity=0.336 Sum_probs=200.1
Q ss_pred hcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHccCCCcceeEEEEEEeC--------C
Q 005227 374 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE--------G 444 (707)
Q Consensus 374 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~--------~ 444 (707)
..+|+..+.||+|+||+||+|... +++.||||++.... ....+|+.+++.++|+||+++++++... .
T Consensus 65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~----~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~ 140 (440)
T PTZ00036 65 NKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP----QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNI 140 (440)
T ss_pred CCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCce
Confidence 457999999999999999999964 68999999885432 2345799999999999999999987432 2
Q ss_pred eEEEEEecCCCCCHHHHHhh--cCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCC-cEEEeeec
Q 005227 445 EQMLVYEFMSNGTLRDQLSA--KSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKF-TAKVADFG 521 (707)
Q Consensus 445 ~~~lV~E~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~-~~kl~DFG 521 (707)
..++||||++ ++|.+++.. .....+++..++.++.||+.||+|||+.+ |+||||||+|||++.++ .+||+|||
T Consensus 141 ~l~lvmE~~~-~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~---IiHrDLKp~NILl~~~~~~vkL~DFG 216 (440)
T PTZ00036 141 FLNVVMEFIP-QTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKF---ICHRDLKPQNLLIDPNTHTLKLCDFG 216 (440)
T ss_pred EEEEEEecCC-ccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCcCHHHEEEcCCCCceeeeccc
Confidence 4678999996 578777754 23456899999999999999999999999 99999999999999664 79999999
Q ss_pred ccccCCCCCCCCccccceecccccCCCccchhhhcc-CCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcc
Q 005227 522 LSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSS 600 (707)
Q Consensus 522 la~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~ 600 (707)
+|+...... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||........ +......
T Consensus 217 la~~~~~~~--------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~-~~~i~~~- 286 (440)
T PTZ00036 217 SAKNLLAGQ--------RSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQ-LVRIIQV- 286 (440)
T ss_pred cchhccCCC--------CcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH-HHHHHHH-
Confidence 998654221 1223567999999999876 4689999999999999999999999975443211 1111100
Q ss_pred cchhhccCCCCCCChHHHHHHHHHHHHhcc--cCCCCCCCHHHHHHHHHHhhhcCC-CCCCCCCccccCCCCCCCCCCCC
Q 005227 601 MMFSVIDGNMGSYPSECVEKFIKLALKCCQ--DETDARPSMSEVMRELESIWNMMP-ESDTKTPEFINSEHTSKEETPPS 677 (707)
Q Consensus 601 ~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~--~~p~~RPt~~~v~~~L~~~~~~~~-~~~~~~~dll~~~L~~dP~~R~s 677 (707)
.+..+.+....+ ...+. .-|...+ .++ ...++ ..+..+.+||.+||++||++|+|
T Consensus 287 ---------~~~p~~~~~~~~----~~~~~~~~~~~~~~--~~l-------~~~~p~~~~~~~~~li~~~L~~dP~~R~t 344 (440)
T PTZ00036 287 ---------LGTPTEDQLKEM----NPNYADIKFPDVKP--KDL-------KKVFPKGTPDDAINFISQFLKYEPLKRLN 344 (440)
T ss_pred ---------hCCCCHHHHHHh----chhhhcccCCccCc--hhH-------HHHhccCCCHHHHHHHHHHCCCChhHCcC
Confidence 001111111000 00000 0010000 011 11122 23445679999999999999999
Q ss_pred CCcCCCCCCCCCC
Q 005227 678 SSSMLKHPYVSSD 690 (707)
Q Consensus 678 a~e~L~Hp~f~~~ 690 (707)
+.|+|+||||..-
T Consensus 345 a~e~l~hp~f~~~ 357 (440)
T PTZ00036 345 PIEALADPFFDDL 357 (440)
T ss_pred HHHHhCChhHHhh
Confidence 9999999999654
No 102
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=5.9e-39 Score=348.07 Aligned_cols=259 Identities=25% Similarity=0.413 Sum_probs=206.3
Q ss_pred HhcCCCccceEeeeCceEEEEEEe------CCCcEEEEEEeccCC-hhhHHHHHHHHHHHHcc-CCCcceeEEEEEEeCC
Q 005227 373 ATNNFNSSTQIGQGGYGKVYKGIL------PDGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEG 444 (707)
Q Consensus 373 ~~~~~~~~~~lG~G~fg~Vy~~~~------~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~ 444 (707)
..++|+..+.||+|+||+||+|.+ .++..||||+++... ....+.+.+|+++++.+ +||||++++++|...+
T Consensus 33 ~~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~ 112 (375)
T cd05104 33 PRNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGG 112 (375)
T ss_pred chHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCC
Confidence 345788899999999999999973 246689999987533 23346788999999999 8999999999999999
Q ss_pred eEEEEEecCCCCCHHHHHhhcC----------------------------------------------------------
Q 005227 445 EQMLVYEFMSNGTLRDQLSAKS---------------------------------------------------------- 466 (707)
Q Consensus 445 ~~~lV~E~~~~gsL~~~l~~~~---------------------------------------------------------- 466 (707)
..++||||+++|+|.++++...
T Consensus 113 ~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (375)
T cd05104 113 PTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSG 192 (375)
T ss_pred cceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccc
Confidence 9999999999999999986532
Q ss_pred ---------------CCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCC
Q 005227 467 ---------------KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 531 (707)
Q Consensus 467 ---------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 531 (707)
...+++..++.++.||++||+|||+.+ |+||||||+|||+++++.+||+|||+++.......
T Consensus 193 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 269 (375)
T cd05104 193 SYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKN---CIHRDLAARNILLTHGRITKICDFGLARDIRNDSN 269 (375)
T ss_pred eecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCchhhEEEECCCcEEEecCccceeccCccc
Confidence 124788999999999999999999998 99999999999999999999999999986543211
Q ss_pred CCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHhhcccchhhccCCC
Q 005227 532 EGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 610 (707)
Q Consensus 532 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 610 (707)
........++..|+|||++.+..++.++|||||||++|||++ |..||............ .. .+..
T Consensus 270 -----~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~-~~--------~~~~ 335 (375)
T cd05104 270 -----YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKM-IK--------EGYR 335 (375)
T ss_pred -----ccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHH-HH--------hCcc
Confidence 011122335678999999999999999999999999999998 88888654322111111 11 1111
Q ss_pred CCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 005227 611 GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELES 648 (707)
Q Consensus 611 ~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~ 648 (707)
...+...+.++.+++..||+.+|++||++.++++.|++
T Consensus 336 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~ 373 (375)
T cd05104 336 MLSPECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQ 373 (375)
T ss_pred CCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHh
Confidence 12233445688999999999999999999999999885
No 103
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=3.6e-39 Score=341.78 Aligned_cols=194 Identities=26% Similarity=0.409 Sum_probs=166.4
Q ss_pred ceEeeeCceEEEEEEeC-CCcEEEEEEeccCCh---hhHHHHHHHHHHHHcc-CCCcceeEEEEEEeCCeEEEEEecCCC
Q 005227 381 TQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQMLVYEFMSN 455 (707)
Q Consensus 381 ~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lV~E~~~~ 455 (707)
+.||+|+||.||+|..+ +|+.||+|+++.... .....+..|..++... +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 46999999999999975 689999999875321 2234567788888764 899999999999999999999999999
Q ss_pred CCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCCCcc
Q 005227 456 GTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIV 535 (707)
Q Consensus 456 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 535 (707)
|+|.+++... ..+++..+..++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 81 g~L~~~i~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~---ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~------ 149 (316)
T cd05620 81 GDLMFHIQDK--GRFDLYRATFYAAEIVCGLQFLHSKG---IIYRDLKLDNVMLDRDGHIKIADFGMCKENVFG------ 149 (316)
T ss_pred CcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEECCCCCEEeCccCCCeecccC------
Confidence 9999998654 35889999999999999999999998 999999999999999999999999998743211
Q ss_pred ccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCC
Q 005227 536 PAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 586 (707)
Q Consensus 536 ~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~ 586 (707)
........||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 150 -~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~ 199 (316)
T cd05620 150 -DNRASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGD 199 (316)
T ss_pred -CCceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCC
Confidence 11223456899999999999999999999999999999999999999643
No 104
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=4.4e-39 Score=342.34 Aligned_cols=194 Identities=28% Similarity=0.422 Sum_probs=165.2
Q ss_pred ceEeeeCceEEEEEEeC-CCcEEEEEEeccCCh---hhHHHHHHHHH-HHHccCCCcceeEEEEEEeCCeEEEEEecCCC
Q 005227 381 TQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQ-FLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSN 455 (707)
Q Consensus 381 ~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~---~~~~~~~~E~~-~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~ 455 (707)
+.||+|+||+||+|... +|+.||+|++..... ...+.+..|.. +++.++||||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence 46999999999999975 789999999865321 12234555554 56789999999999999999999999999999
Q ss_pred CCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCCCcc
Q 005227 456 GTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIV 535 (707)
Q Consensus 456 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 535 (707)
|+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||+++++.+||+|||+++.....
T Consensus 81 g~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~g---ivH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~------ 149 (323)
T cd05575 81 GELFFHLQRE--RSFPEPRARFYAAEIASALGYLHSLN---IIYRDLKPENILLDSQGHVVLTDFGLCKEGIEH------ 149 (323)
T ss_pred CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCCHHHeEECCCCcEEEeccCCCcccccC------
Confidence 9999998653 35889999999999999999999998 999999999999999999999999998753221
Q ss_pred ccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCC
Q 005227 536 PAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 586 (707)
Q Consensus 536 ~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~ 586 (707)
........||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 150 -~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~ 199 (323)
T cd05575 150 -SKTTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSR 199 (323)
T ss_pred -CCccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCC
Confidence 11223456899999999999999999999999999999999999999643
No 105
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=2.6e-39 Score=338.13 Aligned_cols=277 Identities=25% Similarity=0.373 Sum_probs=201.6
Q ss_pred CCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCChh--hHHHHHHHHHHHHcc---CCCcceeEEEEEEe-----CC
Q 005227 376 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ--GEKEFLTEIQFLSRL---HHRNLVSLVGYCDE-----EG 444 (707)
Q Consensus 376 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~--~~~~~~~E~~~l~~l---~h~nIv~l~~~~~~-----~~ 444 (707)
+|++.+.||+|+||+||+|... +++.||+|.+...... ....+.+|+++++.+ +||||+++++++.. ..
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~ 80 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET 80 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence 5888999999999999999965 6899999988753221 223566777777665 79999999998854 34
Q ss_pred eEEEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccc
Q 005227 445 EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSR 524 (707)
Q Consensus 445 ~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~ 524 (707)
..++||||++ ++|.+++.......+++..++.++.|++.||+|||+.+ |+||||||+||++++++.+||+|||+++
T Consensus 81 ~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dikp~Nili~~~~~~kl~dfg~~~ 156 (288)
T cd07863 81 KVTLVFEHVD-QDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGQVKLADFGLAR 156 (288)
T ss_pred eEEEEEcccc-cCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEECccCccc
Confidence 5799999997 59999987765566899999999999999999999999 9999999999999999999999999998
Q ss_pred cCCCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchh
Q 005227 525 LAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFS 604 (707)
Q Consensus 525 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~ 604 (707)
...... ......|+..|+|||++.+..++.++||||+||++|||++|+.||....... .......
T Consensus 157 ~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~-~~~~~~~------ 221 (288)
T cd07863 157 IYSCQM--------ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEAD-QLGKIFD------ 221 (288)
T ss_pred cccCcc--------cCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHH-HHHHHHH------
Confidence 654221 1223467899999999999999999999999999999999999986543321 1111100
Q ss_pred hccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCCCC
Q 005227 605 VIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKH 684 (707)
Q Consensus 605 ~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~H 684 (707)
..... ....... ...+..... .+..... .....+..+....|++.+||..||++|+|++|+|.|
T Consensus 222 ~~~~~---~~~~~~~-~~~~~~~~~--~~~~~~~----------~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~h 285 (288)
T cd07863 222 LIGLP---PEDDWPR-DVTLPRGAF--SPRGPRP----------VQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQH 285 (288)
T ss_pred HhCCC---ChhhCcc-ccccccccc--CCCCCCc----------hHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 00000 0000000 000000000 0000001 111223344455689999999999999999999999
Q ss_pred CCC
Q 005227 685 PYV 687 (707)
Q Consensus 685 p~f 687 (707)
|||
T Consensus 286 p~f 288 (288)
T cd07863 286 PFF 288 (288)
T ss_pred CCC
Confidence 998
No 106
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=1.3e-38 Score=327.07 Aligned_cols=251 Identities=29% Similarity=0.476 Sum_probs=205.7
Q ss_pred cCCCccceEeeeCceEEEEEEeCCCcEEEEEEeccCChhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEecCC
Q 005227 375 NNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMS 454 (707)
Q Consensus 375 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~ 454 (707)
++|+..+.||+|+||.||+|.++++..+|+|.+.... ...+.+.+|++++++++||||+++++++...+..++||||++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~ 82 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGA-MSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFME 82 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEeccCceEEEEecccCC-ccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCC
Confidence 4578889999999999999999888899999886533 334678899999999999999999999999999999999999
Q ss_pred CCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCCCc
Q 005227 455 NGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGI 534 (707)
Q Consensus 455 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 534 (707)
+|+|.++++... ..+++..++.++.|++.||+|||+.+ |+||||||+||++++++.+||+|||.++.......
T Consensus 83 ~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~--- 155 (256)
T cd05114 83 NGCLLNYLRQRQ-GKLSKDMLLSMCQDVCEGMEYLERNS---FIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEY--- 155 (256)
T ss_pred CCcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHHHCC---ccccccCcceEEEcCCCeEEECCCCCccccCCCce---
Confidence 999999997543 35899999999999999999999998 99999999999999999999999999876532211
Q ss_pred cccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHhhcccchhhccCCCCCC
Q 005227 535 VPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSY 613 (707)
Q Consensus 535 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 613 (707)
.......++..|+|||++.+..++.++||||||+++|||++ |+.||...... +..... ..+.....
T Consensus 156 ---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~-~~~~~i---------~~~~~~~~ 222 (256)
T cd05114 156 ---TSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNY-EVVEMI---------SRGFRLYR 222 (256)
T ss_pred ---eccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHH-HHHHHH---------HCCCCCCC
Confidence 11122235668999999998899999999999999999999 88998654432 111111 11112222
Q ss_pred ChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 005227 614 PSECVEKFIKLALKCCQDETDARPSMSEVMREL 646 (707)
Q Consensus 614 ~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L 646 (707)
+...+..+.+++.+||+.+|++||++.++++.|
T Consensus 223 ~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l 255 (256)
T cd05114 223 PKLASMTVYEVMYSCWHEKPEGRPTFAELLRAI 255 (256)
T ss_pred CCCCCHHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence 344556789999999999999999999998875
No 107
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=1.3e-39 Score=353.89 Aligned_cols=208 Identities=23% Similarity=0.315 Sum_probs=174.2
Q ss_pred cCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCCh---hhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEE
Q 005227 375 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 450 (707)
Q Consensus 375 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~ 450 (707)
.+|++.+.||+|+||+||+|+.. +++.||||++..... .....+.+|+++++.++|+||+++++.+.+++..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM 80 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEE
Confidence 36889999999999999999964 689999999864322 22356789999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCC
Q 005227 451 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 530 (707)
Q Consensus 451 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~ 530 (707)
||+++|+|.+++... ..+++..++.++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+|..+....
T Consensus 81 E~~~~g~L~~~i~~~--~~~~~~~~~~~~~qi~~al~~lH~~~---ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~ 155 (376)
T cd05598 81 DYIPGGDMMSLLIRL--GIFEEDLARFYIAELTCAIESVHKMG---FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTH 155 (376)
T ss_pred eCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCCHHHEEECCCCCEEEEeCCCCccccccc
Confidence 999999999999654 35888999999999999999999998 9999999999999999999999999985332100
Q ss_pred CCC------------------------------------ccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHH
Q 005227 531 IEG------------------------------------IVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFL 574 (707)
Q Consensus 531 ~~~------------------------------------~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~ 574 (707)
... ...........||+.|+|||++.+..++.++|||||||++|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvily 235 (376)
T cd05598 156 DSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILY 235 (376)
T ss_pred cccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceee
Confidence 000 00000112357999999999999999999999999999999
Q ss_pred HHHcCCCCCCCCc
Q 005227 575 ELLTGMQPISHGK 587 (707)
Q Consensus 575 elltG~~pf~~~~ 587 (707)
||++|+.||....
T Consensus 236 ell~G~~Pf~~~~ 248 (376)
T cd05598 236 EMLVGQPPFLADT 248 (376)
T ss_pred ehhhCCCCCCCCC
Confidence 9999999997543
No 108
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=3.5e-40 Score=330.43 Aligned_cols=199 Identities=29% Similarity=0.469 Sum_probs=180.6
Q ss_pred hcCCCccceEeeeCceEEEEEEe-CCCcEEEEEEeccCChhhHH---HHHHHHHHHHccCCCcceeEEEEEEeCCeEEEE
Q 005227 374 TNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEK---EFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 449 (707)
Q Consensus 374 ~~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~---~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV 449 (707)
..+|++.+.||+|+||.|-+|.. ..|+.||||.+......++. .+.+|+++|+.++||||+.+|.+|+..+.+.||
T Consensus 52 kHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIviv 131 (668)
T KOG0611|consen 52 KHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIV 131 (668)
T ss_pred hhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEE
Confidence 45788889999999999999995 68999999999876655543 578999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCC
Q 005227 450 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 529 (707)
Q Consensus 450 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~ 529 (707)
|||..+|.|++|+.+.+ .+++.+.+.+++||..|+.|+|.++ ++|||||.+|||+|.++++||+|||++.++..
T Consensus 132 MEYaS~GeLYDYiSer~--~LsErEaRhfFRQIvSAVhYCHknr---VvHRDLKLENILLD~N~NiKIADFGLSNly~~- 205 (668)
T KOG0611|consen 132 MEYASGGELYDYISERG--SLSEREARHFFRQIVSAVHYCHKNR---VVHRDLKLENILLDQNNNIKIADFGLSNLYAD- 205 (668)
T ss_pred EEecCCccHHHHHHHhc--cccHHHHHHHHHHHHHHHHHHhhcc---ceecccchhheeecCCCCeeeeccchhhhhcc-
Confidence 99999999999997654 4999999999999999999999999 99999999999999999999999999987754
Q ss_pred CCCCccccceecccccCCCccchhhhccCCCC-CchhhHHHHHHHHHHHcCCCCCCC
Q 005227 530 DIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLT-DKSDVYSLGVVFLELLTGMQPISH 585 (707)
Q Consensus 530 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s-~~sDVwSlGvll~elltG~~pf~~ 585 (707)
.......+|++-|.+||++.+.+|. +.+|-||+||+||-|+.|..||+.
T Consensus 206 -------~kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG 255 (668)
T KOG0611|consen 206 -------KKFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDG 255 (668)
T ss_pred -------ccHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCC
Confidence 3345678999999999999998885 579999999999999999999974
No 109
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=6.2e-39 Score=330.18 Aligned_cols=256 Identities=29% Similarity=0.499 Sum_probs=215.6
Q ss_pred HhcCCCccceEeeeCceEEEEEEeCCCcEEEEEEeccCChhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEec
Q 005227 373 ATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 452 (707)
Q Consensus 373 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~ 452 (707)
...+|+..++||.|+||+||+|...+++.||+|.+..........+.+|+.+++.++|+||+++++++...+..++||||
T Consensus 4 ~~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 83 (261)
T cd05148 4 PREEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITEL 83 (261)
T ss_pred cHHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEee
Confidence 45678889999999999999999888999999999876665567899999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCC
Q 005227 453 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 532 (707)
Q Consensus 453 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 532 (707)
+++++|.+++.......+++..++.++.|++.||+|||+.+ |+|+||||+||++++++.+||+|||.+.......
T Consensus 84 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~---i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~-- 158 (261)
T cd05148 84 MEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQN---SIHRDLAARNILVGEDLVCKVADFGLARLIKEDV-- 158 (261)
T ss_pred cccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccCcceEEEcCCceEEEccccchhhcCCcc--
Confidence 99999999998766667899999999999999999999998 9999999999999999999999999997653211
Q ss_pred CccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHhhcccchhhccCCCC
Q 005227 533 GIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 611 (707)
Q Consensus 533 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 611 (707)
.......++..|+|||.+.+..++.++||||||+++|+|++ |+.||...... ..... +......
T Consensus 159 -----~~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~-~~~~~---------~~~~~~~ 223 (261)
T cd05148 159 -----YLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNH-EVYDQ---------ITAGYRM 223 (261)
T ss_pred -----ccccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHH-HHHHH---------HHhCCcC
Confidence 11113345678999999998899999999999999999998 88998654321 11111 1112222
Q ss_pred CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 005227 612 SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELES 648 (707)
Q Consensus 612 ~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~ 648 (707)
..+..++..+.+++.+||+.+|++||++.++.+.|+.
T Consensus 224 ~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~ 260 (261)
T cd05148 224 PCPAKCPQEIYKIMLECWAAEPEDRPSFKALREELDN 260 (261)
T ss_pred CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhc
Confidence 3455667889999999999999999999999999875
No 110
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=9.1e-39 Score=332.32 Aligned_cols=253 Identities=24% Similarity=0.359 Sum_probs=198.7
Q ss_pred EeeeCceEEEEEEeC-CCcEEEEEEeccCCh---hhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEecCCCCCH
Q 005227 383 IGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTL 458 (707)
Q Consensus 383 lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL 458 (707)
||+|+||+||++..+ +|+.||+|.+..... ...+.+..|++++++++||||+++++++......++||||+++++|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 699999999999965 689999999864322 2234566799999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCCCccccc
Q 005227 459 RDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAH 538 (707)
Q Consensus 459 ~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~ 538 (707)
.+++.......+++..+..++.|++.||+|||+.+ |+||||||+||++++++.++|+|||++.......
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~-------- 149 (277)
T cd05607 81 KYHIYNVGERGLEMERVIHYSAQITCGILHLHSMD---IVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGK-------- 149 (277)
T ss_pred HHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCC---EEEccCChHhEEEcCCCCEEEeeceeeeecCCCc--------
Confidence 99987766667999999999999999999999998 9999999999999999999999999987653211
Q ss_pred eecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCCCCCCChHHH
Q 005227 539 VSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECV 618 (707)
Q Consensus 539 ~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 618 (707)
......|+..|+|||++.+..++.++||||+||++|||++|+.||.........
T Consensus 150 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~-------------------------- 203 (277)
T cd05607 150 TITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAK-------------------------- 203 (277)
T ss_pred eeeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhH--------------------------
Confidence 122346889999999999988999999999999999999999999643221100
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCC----CcCCCCCCCCCCC
Q 005227 619 EKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSS----SSMLKHPYVSSDV 691 (707)
Q Consensus 619 ~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa----~e~L~Hp~f~~~~ 691 (707)
. ++....+....... ....+....+++.+||..||++|+++ ++++.||||.+-.
T Consensus 204 ~---~~~~~~~~~~~~~~----------------~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~~~h~~f~~~~ 261 (277)
T cd05607 204 E---ELKRRTLEDEVKFE----------------HQNFTEESKDICRLFLAKKPEDRLGSREKNDDPRKHEFFKTIN 261 (277)
T ss_pred H---HHHHHhhccccccc----------------cccCCHHHHHHHHHHhccCHhhCCCCccchhhhhcChhhcCCC
Confidence 0 00111111111000 01122334578888999999999999 5677999997743
No 111
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=4.2e-39 Score=348.56 Aligned_cols=209 Identities=22% Similarity=0.301 Sum_probs=178.2
Q ss_pred HHHHHHHhcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCC---hhhHHHHHHHHHHHHccCCCcceeEEEEEEe
Q 005227 367 YGEMALATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE 442 (707)
Q Consensus 367 ~~~l~~~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~ 442 (707)
..++....++|++.+.||+|+||.||+|..+ +++.||+|++.... ....+.+.+|+.+++.++||||+++++++..
T Consensus 35 ~~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~ 114 (371)
T cd05622 35 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD 114 (371)
T ss_pred HhhcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEc
Confidence 3455666789999999999999999999975 68899999986422 1223457889999999999999999999999
Q ss_pred CCeEEEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecc
Q 005227 443 EGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGL 522 (707)
Q Consensus 443 ~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGl 522 (707)
.+..++||||+++|+|.+++... .+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+
T Consensus 115 ~~~~~lv~Ey~~gg~L~~~~~~~---~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDLkp~NIll~~~~~ikL~DfG~ 188 (371)
T cd05622 115 DRYLYMVMEYMPGGDLVNLMSNY---DVPEKWARFYTAEVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGT 188 (371)
T ss_pred CCEEEEEEcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCC---EEeCCCCHHHEEECCCCCEEEEeCCc
Confidence 99999999999999999998653 3788889999999999999999999 99999999999999999999999999
Q ss_pred cccCCCCCCCCccccceecccccCCCccchhhhccC----CCCCchhhHHHHHHHHHHHcCCCCCCCCc
Q 005227 523 SRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTH----KLTDKSDVYSLGVVFLELLTGMQPISHGK 587 (707)
Q Consensus 523 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~s~~sDVwSlGvll~elltG~~pf~~~~ 587 (707)
++...... ........||+.|+|||++.+. .++.++|||||||++|||++|+.||....
T Consensus 189 a~~~~~~~------~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~ 251 (371)
T cd05622 189 CMKMNKEG------MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADS 251 (371)
T ss_pred eeEcCcCC------cccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCC
Confidence 98654221 1122345799999999999754 37889999999999999999999997543
No 112
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=5.4e-39 Score=342.17 Aligned_cols=193 Identities=24% Similarity=0.377 Sum_probs=167.6
Q ss_pred ceEeeeCceEEEEEEeC-CCcEEEEEEeccCCh---hhHHHHHHHHHHHHcc-CCCcceeEEEEEEeCCeEEEEEecCCC
Q 005227 381 TQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQMLVYEFMSN 455 (707)
Q Consensus 381 ~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lV~E~~~~ 455 (707)
+.||+|+||+||+|... +++.||+|++..... ...+.+.+|+.++.++ +|+||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 46999999999999965 688999999975432 2234678899999888 699999999999999999999999999
Q ss_pred CCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCCCcc
Q 005227 456 GTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIV 535 (707)
Q Consensus 456 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 535 (707)
|+|.+++... ..+++..++.++.||+.||+|||+.+ |+||||||+|||+++++.+||+|||+++.....
T Consensus 81 ~~L~~~~~~~--~~l~~~~~~~~~~qi~~al~~lH~~~---ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~------ 149 (327)
T cd05617 81 GDLMFHMQRQ--RKLPEEHARFYAAEICIALNFLHERG---IIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGP------ 149 (327)
T ss_pred CcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEEeCCCCEEEeccccceeccCC------
Confidence 9999988654 35899999999999999999999998 999999999999999999999999998753211
Q ss_pred ccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCC
Q 005227 536 PAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISH 585 (707)
Q Consensus 536 ~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~ 585 (707)
........||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 150 -~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~ 198 (327)
T cd05617 150 -GDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDI 198 (327)
T ss_pred -CCceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCc
Confidence 1122345689999999999999999999999999999999999999953
No 113
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=3.4e-39 Score=342.92 Aligned_cols=195 Identities=26% Similarity=0.413 Sum_probs=167.6
Q ss_pred ceEeeeCceEEEEEEeC-CCcEEEEEEeccCCh---hhHHHHHHHHHHHHcc-CCCcceeEEEEEEeCCeEEEEEecCCC
Q 005227 381 TQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQMLVYEFMSN 455 (707)
Q Consensus 381 ~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lV~E~~~~ 455 (707)
++||+|+||.||+|... +++.||||++..... .....+..|.++++.+ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 46999999999999975 688999999875321 2234577889988876 799999999999999999999999999
Q ss_pred CCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCCCcc
Q 005227 456 GTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIV 535 (707)
Q Consensus 456 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 535 (707)
|+|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||+++......
T Consensus 81 ~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~----- 150 (321)
T cd05591 81 GDLMFQIQRS--RKFDEPRSRFYAAEVTLALMFLHRHG---VIYRDLKLDNILLDAEGHCKLADFGMCKEGILNG----- 150 (321)
T ss_pred CcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCCCCEEEeecccceecccCC-----
Confidence 9999998654 35889999999999999999999999 9999999999999999999999999987532211
Q ss_pred ccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCc
Q 005227 536 PAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 587 (707)
Q Consensus 536 ~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~~ 587 (707)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 151 --~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~ 200 (321)
T cd05591 151 --VTTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADN 200 (321)
T ss_pred --ccccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCC
Confidence 12234568999999999999999999999999999999999999997543
No 114
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=5.5e-39 Score=350.54 Aligned_cols=285 Identities=21% Similarity=0.256 Sum_probs=207.8
Q ss_pred hcCCCccceEeeeCceEEEEEEeC---CCcEEEEEEeccCChhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEE
Q 005227 374 TNNFNSSTQIGQGGYGKVYKGILP---DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 450 (707)
Q Consensus 374 ~~~~~~~~~lG~G~fg~Vy~~~~~---~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~ 450 (707)
..+|.+.+.||+|+||.||++... .++.||+|.+... +...+|++++++++||||+++++++......++||
T Consensus 91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 165 (392)
T PHA03207 91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAYRWKSTVCMVM 165 (392)
T ss_pred cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEe
Confidence 457999999999999999999853 4678999988643 24568999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCC
Q 005227 451 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 530 (707)
Q Consensus 451 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~ 530 (707)
|++. ++|.+++.. ...+++..++.++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 166 e~~~-~~l~~~l~~--~~~l~~~~~~~i~~ql~~aL~~LH~~g---ivHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~ 239 (392)
T PHA03207 166 PKYK-CDLFTYVDR--SGPLPLEQAITIQRRLLEALAYLHGRG---IIHRDVKTENIFLDEPENAVLGDFGAACKLDAHP 239 (392)
T ss_pred hhcC-CCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEcCCCCEEEccCccccccCccc
Confidence 9995 689998843 346899999999999999999999998 9999999999999999999999999997654322
Q ss_pred CCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCch--hHHHHHHHhhcccchhhccC
Q 005227 531 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKN--IVREVNIAYQSSMMFSVIDG 608 (707)
Q Consensus 531 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~~~--~~~~~~~~~~~~~~~~~~~~ 608 (707)
. ........||+.|+|||++.+..++.++|||||||++|||++|+.||..... ....+...... +..
T Consensus 240 ~-----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~------~~~ 308 (392)
T PHA03207 240 D-----TPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRC------MQV 308 (392)
T ss_pred c-----cccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHH------hcc
Confidence 1 1122345689999999999999999999999999999999999999964322 11111111100 000
Q ss_pred CCCCCChHHHHHHHHHHHHhcccCCCCCCCHH--HHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCCCCCC
Q 005227 609 NMGSYPSECVEKFIKLALKCCQDETDARPSMS--EVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPY 686 (707)
Q Consensus 609 ~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~--~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hp~ 686 (707)
....++......+.+-.. +.....||... +.+. + ...+..+.+||.+||++||++|||+.|+|+|||
T Consensus 309 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~------~--~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~p~ 377 (392)
T PHA03207 309 HPLEFPQNGSTNLCKHFK---QYAIVLRPPYTIPPVIR------K--YGMHMDVEYLIAKMLTFDQEFRPSAQDILSLPL 377 (392)
T ss_pred CccccCCccchhHHHHHH---hhcccccCCccccchhh------c--cCcchhHHHHHHHHhccChhhCCCHHHHhhCch
Confidence 011111111111111111 11112222211 0000 0 012234557899999999999999999999999
Q ss_pred CCCCC
Q 005227 687 VSSDV 691 (707)
Q Consensus 687 f~~~~ 691 (707)
|....
T Consensus 378 f~~~~ 382 (392)
T PHA03207 378 FTKEP 382 (392)
T ss_pred hhccc
Confidence 97643
No 115
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=2.4e-39 Score=349.08 Aligned_cols=292 Identities=21% Similarity=0.268 Sum_probs=210.5
Q ss_pred HHhcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCC--hhhHHHHHHHHHHHHccCCCcceeEEEEEEeC-----
Q 005227 372 LATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE----- 443 (707)
Q Consensus 372 ~~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~----- 443 (707)
...++|+..+.||+|+||.||+|... .++.||||++.... ....+.+.+|+.+++.++||||+++++++...
T Consensus 14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 93 (355)
T cd07874 14 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEE 93 (355)
T ss_pred hhhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccc
Confidence 34578999999999999999999964 68999999987532 23346788999999999999999999988543
Q ss_pred -CeEEEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecc
Q 005227 444 -GEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGL 522 (707)
Q Consensus 444 -~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGl 522 (707)
...++||||++ +++.+.+.. .+++..+..++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+
T Consensus 94 ~~~~~lv~e~~~-~~l~~~~~~----~l~~~~~~~~~~qi~~aL~~LH~~g---ivHrDikp~Nill~~~~~~kl~Dfg~ 165 (355)
T cd07874 94 FQDVYLVMELMD-ANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL 165 (355)
T ss_pred cceeEEEhhhhc-ccHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChHHEEECCCCCEEEeeCcc
Confidence 35799999996 477777643 3788999999999999999999998 99999999999999999999999999
Q ss_pred cccCCCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccc
Q 005227 523 SRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMM 602 (707)
Q Consensus 523 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~ 602 (707)
++..... .......||..|+|||++.+..++.++|||||||++|||++|+.||........+......
T Consensus 166 ~~~~~~~--------~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~---- 233 (355)
T cd07874 166 ARTAGTS--------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ---- 233 (355)
T ss_pred cccCCCc--------cccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH----
Confidence 9764321 1223356899999999999999999999999999999999999999755433222111100
Q ss_pred hhhccCCCCCCChHHHHHHHHHHHHhcccCCCCC-CCHHHHH-HHHHHhh-hcCCCCCCCCCccccCCCCCCCCCCCCCC
Q 005227 603 FSVIDGNMGSYPSECVEKFIKLALKCCQDETDAR-PSMSEVM-RELESIW-NMMPESDTKTPEFINSEHTSKEETPPSSS 679 (707)
Q Consensus 603 ~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~R-Pt~~~v~-~~L~~~~-~~~~~~~~~~~dll~~~L~~dP~~R~sa~ 679 (707)
......+....+......+....|... ..+.... +.+.... ......+....+||.+||..||++|||++
T Consensus 234 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ 306 (355)
T cd07874 234 -------LGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVD 306 (355)
T ss_pred -------hCCCCHHHHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHH
Confidence 111122333333333333332222110 0110000 0000000 00011123446899999999999999999
Q ss_pred cCCCCCCCCCC
Q 005227 680 SMLKHPYVSSD 690 (707)
Q Consensus 680 e~L~Hp~f~~~ 690 (707)
|+|+||||..-
T Consensus 307 ell~hp~~~~~ 317 (355)
T cd07874 307 EALQHPYINVW 317 (355)
T ss_pred HHhcCcchhcc
Confidence 99999999743
No 116
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=8.9e-39 Score=346.39 Aligned_cols=263 Identities=25% Similarity=0.398 Sum_probs=207.8
Q ss_pred HHHhcCCCccceEeeeCceEEEEEEeC------CCcEEEEEEeccCCh-hhHHHHHHHHHHHHcc-CCCcceeEEEEEEe
Q 005227 371 ALATNNFNSSTQIGQGGYGKVYKGILP------DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRL-HHRNLVSLVGYCDE 442 (707)
Q Consensus 371 ~~~~~~~~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~ 442 (707)
....++|++.+.||+|+||.||+|+.. ++..||||++..... .....+.+|+++++.+ +|+||++++++|..
T Consensus 34 ~~~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~ 113 (374)
T cd05106 34 EFPRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTH 113 (374)
T ss_pred cccHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecC
Confidence 344567889999999999999999842 345799999975432 2345688999999999 89999999999999
Q ss_pred CCeEEEEEecCCCCCHHHHHhhcC--------------------------------------------------------
Q 005227 443 EGEQMLVYEFMSNGTLRDQLSAKS-------------------------------------------------------- 466 (707)
Q Consensus 443 ~~~~~lV~E~~~~gsL~~~l~~~~-------------------------------------------------------- 466 (707)
.+..++||||+++|+|.++++...
T Consensus 114 ~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (374)
T cd05106 114 GGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQ 193 (374)
T ss_pred CCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccccccc
Confidence 999999999999999999986421
Q ss_pred ------------CCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCCCc
Q 005227 467 ------------KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGI 534 (707)
Q Consensus 467 ------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 534 (707)
..++++..+++++.||+.||+|||+.+ |+||||||+|||+++++.+||+|||+++.......
T Consensus 194 ~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~g---iiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~--- 267 (374)
T cd05106 194 SSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKN---CIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSN--- 267 (374)
T ss_pred cccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCC---EEeccCchheEEEeCCCeEEEeeceeeeeccCCcc---
Confidence 124788899999999999999999998 99999999999999999999999999976532210
Q ss_pred cccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHhhcccchhhccCCCCCC
Q 005227 535 VPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSY 613 (707)
Q Consensus 535 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 613 (707)
........++..|+|||++.+..++.++|||||||++|||++ |+.||............. . .+.....
T Consensus 268 --~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~~-~--------~~~~~~~ 336 (374)
T cd05106 268 --YVVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMV-K--------RGYQMSR 336 (374)
T ss_pred --eeeccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHHHHHHH-H--------cccCccC
Confidence 111122335678999999999999999999999999999997 999996543211111111 0 0111122
Q ss_pred ChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhh
Q 005227 614 PSECVEKFIKLALKCCQDETDARPSMSEVMRELESIW 650 (707)
Q Consensus 614 ~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~ 650 (707)
+...+.++.+++.+||+.+|++||++.++++.|+++.
T Consensus 337 ~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~~ 373 (374)
T cd05106 337 PDFAPPEIYSIMKMCWNLEPTERPTFSQISQLIQRQL 373 (374)
T ss_pred CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHh
Confidence 3334578899999999999999999999999998753
No 117
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=2e-38 Score=330.48 Aligned_cols=256 Identities=30% Similarity=0.531 Sum_probs=209.8
Q ss_pred cCCCccceEeeeCceEEEEEEeCC------CcEEEEEEeccCCh-hhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEE
Q 005227 375 NNFNSSTQIGQGGYGKVYKGILPD------GTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQM 447 (707)
Q Consensus 375 ~~~~~~~~lG~G~fg~Vy~~~~~~------~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~ 447 (707)
++|+..+.||+|+||.||+|.... ...||+|.+..... .....+.+|++++++++||||+++++++...+..+
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTC 84 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceE
Confidence 467889999999999999998642 25799999875432 23457899999999999999999999999999999
Q ss_pred EEEecCCCCCHHHHHhhcCC--------------CCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCC
Q 005227 448 LVYEFMSNGTLRDQLSAKSK--------------EPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKF 513 (707)
Q Consensus 448 lV~E~~~~gsL~~~l~~~~~--------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~ 513 (707)
++|||+++++|.+++..... ..+++..++.++.|++.||+|||+.+ ++|+||||+||++++++
T Consensus 85 ~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~---i~H~dlkp~Nil~~~~~ 161 (283)
T cd05048 85 MLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHH---FVHRDLAARNCLVGEGL 161 (283)
T ss_pred EEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccccccceEEEcCCC
Confidence 99999999999999976422 45888999999999999999999998 99999999999999999
Q ss_pred cEEEeeecccccCCCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc-CCCCCCCCchhHHH
Q 005227 514 TAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVRE 592 (707)
Q Consensus 514 ~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~ellt-G~~pf~~~~~~~~~ 592 (707)
.+||+|||+++.....+. ........++..|+|||.+.+..++.++|||||||++|||++ |..||...... +.
T Consensus 162 ~~~L~dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~-~~ 235 (283)
T cd05048 162 TVKISDFGLSRDIYSADY-----YRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQ-EV 235 (283)
T ss_pred cEEECCCcceeecccccc-----ccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHH-HH
Confidence 999999999976533221 111223346788999999999999999999999999999998 99998653321 11
Q ss_pred HHHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 005227 593 VNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELES 648 (707)
Q Consensus 593 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~ 648 (707)
.. .+..+.....+..++.++.+++.+||+.+|.+||++.++++.|++
T Consensus 236 ~~---------~i~~~~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05048 236 IE---------MIRSRQLLPCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRS 282 (283)
T ss_pred HH---------HHHcCCcCCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhc
Confidence 11 111223334567788999999999999999999999999999875
No 118
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=6.2e-39 Score=340.36 Aligned_cols=195 Identities=25% Similarity=0.400 Sum_probs=167.6
Q ss_pred ceEeeeCceEEEEEEeC-CCcEEEEEEeccCCh---hhHHHHHHHHHHHHcc-CCCcceeEEEEEEeCCeEEEEEecCCC
Q 005227 381 TQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQMLVYEFMSN 455 (707)
Q Consensus 381 ~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lV~E~~~~ 455 (707)
+.||+|+||+||+|... +++.||||++..... .....+..|.++++.+ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999975 688999999875321 2234567888999888 799999999999999999999999999
Q ss_pred CCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCCCcc
Q 005227 456 GTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIV 535 (707)
Q Consensus 456 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 535 (707)
|+|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||++++++.+||+|||+++......
T Consensus 81 ~~L~~~~~~~--~~l~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~----- 150 (318)
T cd05570 81 GDLMFHIQRS--GRFDEPRARFYAAEIVLGLQFLHERG---IIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGG----- 150 (318)
T ss_pred CCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCC---eEccCCCHHHeEECCCCcEEecccCCCeecCcCC-----
Confidence 9999998654 35899999999999999999999998 9999999999999999999999999987532211
Q ss_pred ccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCc
Q 005227 536 PAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 587 (707)
Q Consensus 536 ~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~~ 587 (707)
.......|++.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 151 --~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~ 200 (318)
T cd05570 151 --VTTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDD 200 (318)
T ss_pred --CcccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCC
Confidence 11233468999999999999999999999999999999999999996443
No 119
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=1.8e-38 Score=327.31 Aligned_cols=255 Identities=31% Similarity=0.486 Sum_probs=210.5
Q ss_pred cCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEecC
Q 005227 375 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 453 (707)
Q Consensus 375 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~ 453 (707)
.+|+..+.||+|+||.||+|..+ +++.||+|++.... ...+++.+|+++++.++|+||+++++++..++..++||||+
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (263)
T cd05052 6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM 84 (263)
T ss_pred HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCc-hHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeC
Confidence 45778899999999999999965 68899999987543 34567899999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCCC
Q 005227 454 SNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEG 533 (707)
Q Consensus 454 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 533 (707)
++++|.+++.......+++..++.++.|+++||+|||+.+ ++||||||+||++++++.+||+|||+++.......
T Consensus 85 ~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~---i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~-- 159 (263)
T cd05052 85 TYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY-- 159 (263)
T ss_pred CCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---EeecccCcceEEEcCCCcEEeCCCcccccccccee--
Confidence 9999999997766667899999999999999999999998 99999999999999999999999999986543211
Q ss_pred ccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHhhcccchhhccCCCCC
Q 005227 534 IVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGS 612 (707)
Q Consensus 534 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 612 (707)
.......++..|+|||++.+..++.++|||||||++|||++ |..||..... .+..... . ......
T Consensus 160 ----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~-~~~~~~~-~--------~~~~~~ 225 (263)
T cd05052 160 ----TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL-SQVYELL-E--------KGYRME 225 (263)
T ss_pred ----eccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCH-HHHHHHH-H--------CCCCCC
Confidence 01112234568999999999999999999999999999998 8889865332 2211111 1 111223
Q ss_pred CChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 005227 613 YPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 649 (707)
Q Consensus 613 ~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~ 649 (707)
.+..++..+.+++.+||+.+|++||++.++.+.|+.+
T Consensus 226 ~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 226 RPEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred CCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence 4555678899999999999999999999999998865
No 120
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-39 Score=338.95 Aligned_cols=261 Identities=29% Similarity=0.477 Sum_probs=224.0
Q ss_pred HHHHhcCCCccceEeeeCceEEEEEEeCC---C--cEEEEEEeccCC-hhhHHHHHHHHHHHHccCCCcceeEEEEEEeC
Q 005227 370 MALATNNFNSSTQIGQGGYGKVYKGILPD---G--TVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE 443 (707)
Q Consensus 370 l~~~~~~~~~~~~lG~G~fg~Vy~~~~~~---~--~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~ 443 (707)
.++..+..+..++||.|-||.||+|++.+ | -.||||..+.+. ....+.|++|+.+|++++||||++++|+|.+
T Consensus 384 yel~Re~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e- 462 (974)
T KOG4257|consen 384 YELRRELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVE- 462 (974)
T ss_pred ceeehhhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeec-
Confidence 34444555567899999999999999532 3 359999998744 4456789999999999999999999999975
Q ss_pred CeEEEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeeccc
Q 005227 444 GEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLS 523 (707)
Q Consensus 444 ~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla 523 (707)
...|+|||.++-|.|..+|+.+ ...++......++.||+.||+|||+.. +|||||..+||||.+.-.+|++|||++
T Consensus 463 ~P~WivmEL~~~GELr~yLq~n-k~sL~l~tL~ly~~Qi~talaYLeSkr---fVHRDIAaRNiLVsSp~CVKLaDFGLS 538 (974)
T KOG4257|consen 463 QPMWIVMELAPLGELREYLQQN-KDSLPLRTLTLYCYQICTALAYLESKR---FVHRDIAARNILVSSPQCVKLADFGLS 538 (974)
T ss_pred cceeEEEecccchhHHHHHHhc-cccchHHHHHHHHHHHHHHHHHHHhhc---hhhhhhhhhheeecCcceeeecccchh
Confidence 4789999999999999999765 456899999999999999999999998 999999999999999999999999999
Q ss_pred ccCCCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHhhcccc
Q 005227 524 RLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMM 602 (707)
Q Consensus 524 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~ellt-G~~pf~~~~~~~~~~~~~~~~~~~ 602 (707)
+.+....+.. .....-++.|||||.+.-.+++.+||||.|||.|||++. |..||..-.+ .+.+
T Consensus 539 R~~ed~~yYk------aS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkN----------sDVI 602 (974)
T KOG4257|consen 539 RYLEDDAYYK------ASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKN----------SDVI 602 (974)
T ss_pred hhccccchhh------ccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccc----------cceE
Confidence 9887655332 122334678999999999999999999999999999998 9999976443 3456
Q ss_pred hhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 005227 603 FSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 651 (707)
Q Consensus 603 ~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~ 651 (707)
..+..+.+.+.|+.|+..++.++.+||..+|.+||.+.++...|..+..
T Consensus 603 ~~iEnGeRlP~P~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv~q 651 (974)
T KOG4257|consen 603 GHIENGERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVLQ 651 (974)
T ss_pred EEecCCCCCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHHHH
Confidence 6777888999999999999999999999999999999999998887765
No 121
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=8.5e-39 Score=333.94 Aligned_cols=258 Identities=24% Similarity=0.367 Sum_probs=205.2
Q ss_pred CCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCChh---hHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEe
Q 005227 376 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ---GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 451 (707)
Q Consensus 376 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~---~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E 451 (707)
.|+..+.||+|+||+||++... +++.||||.+...... ....+.+|+.++++++|++++++++.+.+.+..++|||
T Consensus 1 ~f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e 80 (285)
T cd05630 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEE
Confidence 3677899999999999999965 7899999988653322 23457789999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCC
Q 005227 452 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 531 (707)
Q Consensus 452 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 531 (707)
|+++++|.+++.......+++..+..++.|++.||.|||+.+ |+||||||+||++++++.++|+|||++.......
T Consensus 81 ~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~---iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~- 156 (285)
T cd05630 81 LMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQER---IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ- 156 (285)
T ss_pred ecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCCCHHHEEECCCCCEEEeeccceeecCCCc-
Confidence 999999999997665567999999999999999999999988 9999999999999999999999999987543211
Q ss_pred CCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCCCC
Q 005227 532 EGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 611 (707)
Q Consensus 532 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 611 (707)
......|+..|+|||++.+..++.++|||||||++|||++|+.||.........
T Consensus 157 -------~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~------------------- 210 (285)
T cd05630 157 -------TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKR------------------- 210 (285)
T ss_pred -------cccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchH-------------------
Confidence 112346899999999999999999999999999999999999999643221000
Q ss_pred CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCC-----CCcCCCCCC
Q 005227 612 SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPS-----SSSMLKHPY 686 (707)
Q Consensus 612 ~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~s-----a~e~L~Hp~ 686 (707)
+... .+.. ..+. .......+...+|+.+||+.||++|+| ++|+++|||
T Consensus 211 ----~~~~---~~~~----~~~~----------------~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h~~ 263 (285)
T cd05630 211 ----EEVE---RLVK----EVQE----------------EYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEHPL 263 (285)
T ss_pred ----HHHH---hhhh----hhhh----------------hcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcChh
Confidence 0000 0000 0000 000112233457889999999999999 899999999
Q ss_pred CCCC
Q 005227 687 VSSD 690 (707)
Q Consensus 687 f~~~ 690 (707)
|..-
T Consensus 264 ~~~~ 267 (285)
T cd05630 264 FKQI 267 (285)
T ss_pred hhcc
Confidence 9763
No 122
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=2.5e-38 Score=325.86 Aligned_cols=256 Identities=28% Similarity=0.489 Sum_probs=211.0
Q ss_pred HhcCCCccceEeeeCceEEEEEEeCCCcEEEEEEeccCChhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEec
Q 005227 373 ATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 452 (707)
Q Consensus 373 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~ 452 (707)
..++|+..+.||+|++|.||+|...+++.||+|.+.... ...+++.+|++++++++|+||+++++++...+..++||||
T Consensus 4 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 82 (261)
T cd05068 4 DRTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGT-MDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTEL 82 (261)
T ss_pred chhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCc-ccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeec
Confidence 456788999999999999999998778899999987643 3356789999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCC
Q 005227 453 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 532 (707)
Q Consensus 453 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 532 (707)
+++++|.+++.......+++..+..++.|++.||.|||+.+ |+||||||+||++++++.+||+|||+++.......
T Consensus 83 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~- 158 (261)
T cd05068 83 MKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQN---YIHRDLAARNVLVGENNICKVADFGLARVIKEDIY- 158 (261)
T ss_pred ccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeccCCcceEEEcCCCCEEECCcceEEEccCCcc-
Confidence 99999999997755557899999999999999999999998 99999999999999999999999999987642211
Q ss_pred CccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHhhcccchhhccCCCC
Q 005227 533 GIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 611 (707)
Q Consensus 533 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 611 (707)
........+..|+|||++.+..++.++||||||+++|||++ |+.||....... ..... . .....
T Consensus 159 -----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~-~~~~~-~--------~~~~~ 223 (261)
T cd05068 159 -----EAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAE-VLQQV-D--------QGYRM 223 (261)
T ss_pred -----cccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHH-HHHHH-H--------cCCCC
Confidence 01111223457999999999999999999999999999999 998986543211 11111 0 11112
Q ss_pred CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 005227 612 SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELES 648 (707)
Q Consensus 612 ~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~ 648 (707)
..+..++..+.+++.+|++.+|++||++.++.+.|++
T Consensus 224 ~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~ 260 (261)
T cd05068 224 PCPPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLED 260 (261)
T ss_pred CCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhc
Confidence 2344566889999999999999999999999999875
No 123
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=3.6e-39 Score=343.30 Aligned_cols=194 Identities=29% Similarity=0.415 Sum_probs=165.3
Q ss_pred ceEeeeCceEEEEEEeC-CCcEEEEEEeccCC---hhhHHHHHHHHH-HHHccCCCcceeEEEEEEeCCeEEEEEecCCC
Q 005227 381 TQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQ-FLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSN 455 (707)
Q Consensus 381 ~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~~~~E~~-~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~ 455 (707)
+.||+|+||+||+|... +|+.||+|++.... ....+.+..|.. +++.++||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG 80 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence 46999999999999964 78999999986532 122345556655 46779999999999999999999999999999
Q ss_pred CCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCCCcc
Q 005227 456 GTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIV 535 (707)
Q Consensus 456 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 535 (707)
|+|..++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||+++++.+||+|||+++.....
T Consensus 81 ~~L~~~l~~~--~~~~~~~~~~~~~qi~~al~~lH~~g---ivH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~------ 149 (325)
T cd05604 81 GELFFHLQRE--RSFPEPRARFYAAEIASALGYLHSIN---IVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQ------ 149 (325)
T ss_pred CCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHeEECCCCCEEEeecCCcccCCCC------
Confidence 9999988653 35899999999999999999999998 999999999999999999999999998753211
Q ss_pred ccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCC
Q 005227 536 PAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 586 (707)
Q Consensus 536 ~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~ 586 (707)
........||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 150 -~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~ 199 (325)
T cd05604 150 -SDTTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCR 199 (325)
T ss_pred -CCCcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCC
Confidence 11223456899999999999999999999999999999999999999643
No 124
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=9.5e-39 Score=340.85 Aligned_cols=202 Identities=28% Similarity=0.344 Sum_probs=172.9
Q ss_pred cCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCC---hhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEE
Q 005227 375 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 450 (707)
Q Consensus 375 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~ 450 (707)
++|++.+.||+|+||+||++... +++.||+|++.... ....+.+.+|+.+++.++|+||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM 80 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence 47889999999999999999965 68999999986422 122356888999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCC
Q 005227 451 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 530 (707)
Q Consensus 451 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~ 530 (707)
||+++|+|.+++.+. ...+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||++.......
T Consensus 81 e~~~g~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~ 156 (331)
T cd05597 81 DYYVGGDLLTLLSKF-EDRLPEDMARFYLAEMVLAIDSVHQLG---YVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADG 156 (331)
T ss_pred ecCCCCcHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCC---eEECCCCHHHEEECCCCCEEEEECCceeecCCCC
Confidence 999999999999653 345889999999999999999999999 9999999999999999999999999987653321
Q ss_pred CCCccccceecccccCCCccchhhhcc-----CCCCCchhhHHHHHHHHHHHcCCCCCCCC
Q 005227 531 IEGIVPAHVSTVVKGTPGYLDPEYFLT-----HKLTDKSDVYSLGVVFLELLTGMQPISHG 586 (707)
Q Consensus 531 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~s~~sDVwSlGvll~elltG~~pf~~~ 586 (707)
........||+.|+|||++.. ..++.++|||||||++|||++|+.||...
T Consensus 157 ------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~ 211 (331)
T cd05597 157 ------TVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAE 211 (331)
T ss_pred ------CccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCC
Confidence 111223468999999999973 45788999999999999999999999643
No 125
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=1.1e-38 Score=339.29 Aligned_cols=241 Identities=20% Similarity=0.316 Sum_probs=193.5
Q ss_pred CCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCCh---hhHHHHHHHHHHHHcc-CCCcceeEEEEEEeCCeEEEEE
Q 005227 376 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQMLVY 450 (707)
Q Consensus 376 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lV~ 450 (707)
+|+..+.||+|+||+||+|... +++.||||++..... .....+..|..++..+ +|++|+++++++...+..++||
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM 80 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence 4788999999999999999965 678999999875322 2234567788888877 5899999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCC
Q 005227 451 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 530 (707)
Q Consensus 451 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~ 530 (707)
||+++|+|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||+++......
T Consensus 81 E~~~~g~L~~~~~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~ 155 (323)
T cd05616 81 EYVNGGDLMYQIQQV--GRFKEPHAVFYAAEIAIGLFFLHSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDG 155 (323)
T ss_pred cCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---EEecCCCHHHeEECCCCcEEEccCCCceecCCCC
Confidence 999999999998654 34889999999999999999999998 9999999999999999999999999987533211
Q ss_pred CCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCCC
Q 005227 531 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 610 (707)
Q Consensus 531 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 610 (707)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||...... ....... ...
T Consensus 156 -------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~-~~~~~i~----------~~~ 217 (323)
T cd05616 156 -------VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED-ELFQSIM----------EHN 217 (323)
T ss_pred -------CccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHH-HHHHHHH----------hCC
Confidence 1223456899999999999999999999999999999999999999754431 1111111 111
Q ss_pred CCCChHHHHHHHHHHHHhcccCCCCCCCH
Q 005227 611 GSYPSECVEKFIKLALKCCQDETDARPSM 639 (707)
Q Consensus 611 ~~~~~~~~~~l~~l~~~c~~~~p~~RPt~ 639 (707)
..+|...+.++.+++.+|++.+|.+|++.
T Consensus 218 ~~~p~~~s~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05616 218 VAYPKSMSKEAVAICKGLMTKHPGKRLGC 246 (323)
T ss_pred CCCCCcCCHHHHHHHHHHcccCHHhcCCC
Confidence 22344556677788888888888888764
No 126
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=8.4e-40 Score=294.73 Aligned_cols=282 Identities=24% Similarity=0.372 Sum_probs=217.6
Q ss_pred CCCccceEeeeCceEEEEEE-eCCCcEEEEEEeccCC--hhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEec
Q 005227 376 NFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 452 (707)
Q Consensus 376 ~~~~~~~lG~G~fg~Vy~~~-~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~ 452 (707)
+|...++||+|.||+||+|+ .++++.||+|++.... ..-.....+|+-+++.++|.|||++++....++..-+|+||
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~ 82 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEF 82 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHH
Confidence 56678899999999999999 4578999999876533 22346789999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCC
Q 005227 453 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 532 (707)
Q Consensus 453 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 532 (707)
| ..+|..+...-. ..++.+.++.++.|+++||.|+|+++ +.|||+||.|.|++.+|+.|++|||+|+-+..+
T Consensus 83 c-dqdlkkyfdsln-g~~d~~~~rsfmlqllrgl~fchshn---vlhrdlkpqnllin~ngelkladfglarafgip--- 154 (292)
T KOG0662|consen 83 C-DQDLKKYFDSLN-GDLDPEIVRSFMLQLLRGLGFCHSHN---VLHRDLKPQNLLINRNGELKLADFGLARAFGIP--- 154 (292)
T ss_pred h-hHHHHHHHHhcC-CcCCHHHHHHHHHHHHhhhhhhhhhh---hhhccCCcceEEeccCCcEEecccchhhhcCCc---
Confidence 9 568988886643 35899999999999999999999999 999999999999999999999999999976532
Q ss_pred CccccceecccccCCCccchhhhcc-CCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCCCC
Q 005227 533 GIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 611 (707)
Q Consensus 533 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 611 (707)
.........|..|++|.++.+ .-|+...|+||-||++.|+.....|..++.+..+++..++..-.
T Consensus 155 ----vrcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg---------- 220 (292)
T KOG0662|consen 155 ----VRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLG---------- 220 (292)
T ss_pred ----eEeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhC----------
Confidence 334455667899999999988 45889999999999999999966777777777777666543211
Q ss_pred CCChHHHHHHHHHHHHhcccCCCCC--CCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCCCCCCCCC
Q 005227 612 SYPSECVEKFIKLALKCCQDETDAR--PSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSS 689 (707)
Q Consensus 612 ~~~~~~~~~l~~l~~~c~~~~p~~R--Pt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f~~ 689 (707)
...++.+..+.++-.. ..-|--- -+..+++ |.......|+++++|.-+|..|++|++||+||||+.
T Consensus 221 ~p~ed~wps~t~lpdy--k~yp~ypattswsqiv----------p~lns~grdllqkll~cnp~qrisaeaalqhpyf~d 288 (292)
T KOG0662|consen 221 TPTEDQWPSMTKLPDY--KPYPIYPATTSWSQIV----------PKLNSTGRDLLQKLLKCNPAQRISAEAALQHPYFSD 288 (292)
T ss_pred CCccccCCccccCCCC--cccCCccccchHHHHh----------hhhcchhHHHHHHHhccCcccccCHHHHhcCccccc
Confidence 1111111111111000 0011111 1223333 333444568999999999999999999999999976
Q ss_pred CC
Q 005227 690 DV 691 (707)
Q Consensus 690 ~~ 691 (707)
..
T Consensus 289 ~s 290 (292)
T KOG0662|consen 289 FS 290 (292)
T ss_pred cC
Confidence 53
No 127
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-39 Score=306.64 Aligned_cols=268 Identities=25% Similarity=0.364 Sum_probs=214.2
Q ss_pred HHhcCCCccceEeeeCceEEEEEE-eCCCcEEEEEEeccCChhhHHHHHHHHHHHHccCCCcceeEEEEEEe-----CCe
Q 005227 372 LATNNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE-----EGE 445 (707)
Q Consensus 372 ~~~~~~~~~~~lG~G~fg~Vy~~~-~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~-----~~~ 445 (707)
...++|++.+.||+|||+-||.++ ..+++.+|+|++.....++.+..++|++..++++|||+++++++... ..+
T Consensus 18 In~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~ 97 (302)
T KOG2345|consen 18 INNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHE 97 (302)
T ss_pred EcCceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCcee
Confidence 445789999999999999999999 66899999999998888888899999999999999999999988733 346
Q ss_pred EEEEEecCCCCCHHHHHhhc--CCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeeccc
Q 005227 446 QMLVYEFMSNGTLRDQLSAK--SKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLS 523 (707)
Q Consensus 446 ~~lV~E~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla 523 (707)
.|++++|...|+|.+.+... .+..+++.++++|+.+|++||++||+.. ++++||||||.|||+.+++.+++.|||.+
T Consensus 98 ~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~-~~yAH~DiKP~NILls~~~~~vl~D~GS~ 176 (302)
T KOG2345|consen 98 AYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKE-PPYAHRDIKPANILLSDSGLPVLMDLGSA 176 (302)
T ss_pred EEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccC-CcccccCCCcceeEecCCCceEEEeccCc
Confidence 89999999999999999763 3446999999999999999999999975 68999999999999999999999999999
Q ss_pred ccCCCCCCCCc--cccceecccccCCCccchhhhc---cCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhh
Q 005227 524 RLAPVPDIEGI--VPAHVSTVVKGTPGYLDPEYFL---THKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQ 598 (707)
Q Consensus 524 ~~~~~~~~~~~--~~~~~~~~~~gt~~y~aPE~~~---~~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~ 598 (707)
+...-.-.... ..-........|..|+|||.+. +...++++|||||||++|+|+.|..||+..-. +
T Consensus 177 ~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~---------~ 247 (302)
T KOG2345|consen 177 TQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQ---------Q 247 (302)
T ss_pred cccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhh---------c
Confidence 76542211100 0011123345789999999996 45678999999999999999999999963211 1
Q ss_pred ccc-chhhccCCCCC-CChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 005227 599 SSM-MFSVIDGNMGS-YPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 649 (707)
Q Consensus 599 ~~~-~~~~~~~~~~~-~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~ 649 (707)
.+. ...+..+.... -...+++.+.+++..|++.||.+||+..+++..+..+
T Consensus 248 GgSlaLAv~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~L 300 (302)
T KOG2345|consen 248 GGSLALAVQNAQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDL 300 (302)
T ss_pred CCeEEEeeeccccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhh
Confidence 111 12222222111 1122788999999999999999999999999887653
No 128
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=4.2e-39 Score=347.74 Aligned_cols=207 Identities=26% Similarity=0.375 Sum_probs=175.1
Q ss_pred cCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCC---hhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEE
Q 005227 375 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 450 (707)
Q Consensus 375 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~ 450 (707)
++|+..+.||+|+||+||++..+ +++.||+|++.... ......+.+|+.++..++|+||+++++++.+.+..++||
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~ 80 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM 80 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 46888999999999999999965 68999999986432 222356788999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCC
Q 005227 451 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 530 (707)
Q Consensus 451 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~ 530 (707)
||+++|+|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||++.......
T Consensus 81 E~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~~L~~lH~~g---ivHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~ 155 (360)
T cd05627 81 EFLPGGDMMTLLMKK--DTLSEEATQFYIAETVLAIDAIHQLG---FIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAH 155 (360)
T ss_pred eCCCCccHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eEccCCCHHHEEECCCCCEEEeeccCCccccccc
Confidence 999999999999654 35899999999999999999999999 9999999999999999999999999987543211
Q ss_pred CCCc----------------------------cccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCC
Q 005227 531 IEGI----------------------------VPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQP 582 (707)
Q Consensus 531 ~~~~----------------------------~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~p 582 (707)
.... ..........||+.|+|||++.+..++.++|||||||++|||++|+.|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~P 235 (360)
T cd05627 156 RTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPP 235 (360)
T ss_pred ccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCC
Confidence 0000 000011235799999999999999999999999999999999999999
Q ss_pred CCCC
Q 005227 583 ISHG 586 (707)
Q Consensus 583 f~~~ 586 (707)
|...
T Consensus 236 f~~~ 239 (360)
T cd05627 236 FCSE 239 (360)
T ss_pred CCCC
Confidence 9643
No 129
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=3.9e-38 Score=332.78 Aligned_cols=284 Identities=22% Similarity=0.348 Sum_probs=209.2
Q ss_pred cCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCCh-hhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEec
Q 005227 375 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 452 (707)
Q Consensus 375 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~ 452 (707)
++|++.+.||+|+||.||++... ++..||+|.+..... ....++.+|++++++++||||+++++++..++..++||||
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey 80 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEH 80 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeec
Confidence 46889999999999999999965 688999998875422 2345688999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHh-CCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCC
Q 005227 453 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHT-EADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 531 (707)
Q Consensus 453 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 531 (707)
+++++|.++++.. ..+++..+..++.|+++||.|||+ .+ ++||||||+||++++++.+||+|||++......
T Consensus 81 ~~~~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~-- 153 (308)
T cd06615 81 MDGGSLDQVLKKA--GRIPENILGKISIAVLRGLTYLREKHK---IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS-- 153 (308)
T ss_pred cCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhhCC---EEECCCChHHEEEecCCcEEEccCCCccccccc--
Confidence 9999999999754 458899999999999999999997 46 999999999999999999999999998754321
Q ss_pred CCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCCCC
Q 005227 532 EGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 611 (707)
Q Consensus 532 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 611 (707)
......|+..|+|||.+.+..++.++|||||||++|||++|+.||..... .. ....+... .........
T Consensus 154 -------~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~-~~-~~~~~~~~-~~~~~~~~~- 222 (308)
T cd06615 154 -------MANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDA-KE-LEAMFGRP-VSEGEAKES- 222 (308)
T ss_pred -------ccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcch-hh-HHHhhcCc-cccccccCC-
Confidence 12234688999999999888899999999999999999999999964432 11 11111100 000000000
Q ss_pred CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCC------CCCCCCCccccCCCCCCCCCCCCCCcCCCCC
Q 005227 612 SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMP------ESDTKTPEFINSEHTSKEETPPSSSSMLKHP 685 (707)
Q Consensus 612 ~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~------~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hp 685 (707)
. .+....+...+....+.+.++.+....+ ..+....+|+.+||..||++|||++|+++||
T Consensus 223 --~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~ 288 (308)
T cd06615 223 --H------------RPVSGHPPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHP 288 (308)
T ss_pred --c------------ccccCCCCCccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcCh
Confidence 0 0000011111111111111111111111 1123356899999999999999999999999
Q ss_pred CCCCC
Q 005227 686 YVSSD 690 (707)
Q Consensus 686 ~f~~~ 690 (707)
||...
T Consensus 289 ~~~~~ 293 (308)
T cd06615 289 FIKRA 293 (308)
T ss_pred hhhhc
Confidence 99763
No 130
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=4.2e-38 Score=351.73 Aligned_cols=251 Identities=22% Similarity=0.302 Sum_probs=207.4
Q ss_pred CCCccceEeeeCceEEEEEEeC-C-CcEEEEEEeccCChhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEecC
Q 005227 376 NFNSSTQIGQGGYGKVYKGILP-D-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 453 (707)
Q Consensus 376 ~~~~~~~lG~G~fg~Vy~~~~~-~-~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~ 453 (707)
.|...+.||+|+||.||+|... + ++.||+|.+..........+.+|+.+++.++||||+++++++...+..++||||+
T Consensus 68 ~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~~ 147 (478)
T PTZ00267 68 MYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYG 147 (478)
T ss_pred eEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEECC
Confidence 3888999999999999999854 4 6788999876655555567888999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhc--CCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCC
Q 005227 454 SNGTLRDQLSAK--SKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 531 (707)
Q Consensus 454 ~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 531 (707)
++|+|.++++.. ...++++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.......
T Consensus 148 ~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~---ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~ 224 (478)
T PTZ00267 148 SGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRK---MMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVS 224 (478)
T ss_pred CCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC---EEECCcCHHhEEECCCCcEEEEeCcCceecCCccc
Confidence 999999988652 3446899999999999999999999998 99999999999999999999999999986543210
Q ss_pred CCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCCCC
Q 005227 532 EGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 611 (707)
Q Consensus 532 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 611 (707)
........||+.|+|||++.+..++.++|||||||++|||++|+.||..... ..... .+..+...
T Consensus 225 -----~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~-~~~~~---------~~~~~~~~ 289 (478)
T PTZ00267 225 -----LDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQ-REIMQ---------QVLYGKYD 289 (478)
T ss_pred -----cccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCH-HHHHH---------HHHhCCCC
Confidence 1123345689999999999999999999999999999999999999965432 11111 11222233
Q ss_pred CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005227 612 SYPSECVEKFIKLALKCCQDETDARPSMSEVMR 644 (707)
Q Consensus 612 ~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~ 644 (707)
..+..++..+.+++..|++.+|++||++.+++.
T Consensus 290 ~~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~ 322 (478)
T PTZ00267 290 PFPCPVSSGMKALLDPLLSKNPALRPTTQQLLH 322 (478)
T ss_pred CCCccCCHHHHHHHHHHhccChhhCcCHHHHHh
Confidence 345556678999999999999999999998864
No 131
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=9.1e-39 Score=344.65 Aligned_cols=253 Identities=30% Similarity=0.457 Sum_probs=213.2
Q ss_pred ccceEeeeCceEEEEEEe-CCC----cEEEEEEeccCC-hhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEec
Q 005227 379 SSTQIGQGGYGKVYKGIL-PDG----TVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 452 (707)
Q Consensus 379 ~~~~lG~G~fg~Vy~~~~-~~~----~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~ 452 (707)
..++||+|+||+||+|.+ ++| -+||||++.... .+..+++.+|+-+|.+++|||+++++++|.... ..||++|
T Consensus 700 k~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvtq~ 778 (1177)
T KOG1025|consen 700 KDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVTQL 778 (1177)
T ss_pred hhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHHHh
Confidence 468999999999999995 444 368999887643 344678999999999999999999999998765 8899999
Q ss_pred CCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCC
Q 005227 453 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 532 (707)
Q Consensus 453 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 532 (707)
|+.|+|.++++.+ +..+..+..+.+..|||+||.|||.+. +|||||.++||||..-..+||.|||+|+.....+.+
T Consensus 779 mP~G~LlDyvr~h-r~~igsq~lLnw~~QIAkgM~YLe~qr---lVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~e 854 (1177)
T KOG1025|consen 779 MPLGCLLDYVREH-RDNIGSQDLLNWCYQIAKGMKYLEEQR---LVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEKE 854 (1177)
T ss_pred cccchHHHHHHHh-hccccHHHHHHHHHHHHHHHHHHHhcc---hhhhhhhhhheeecCCCeEEEEecchhhccCccccc
Confidence 9999999999874 556889999999999999999999998 999999999999999999999999999988765422
Q ss_pred CccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHhhcccchhhccCCCC
Q 005227 533 GIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 611 (707)
Q Consensus 533 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 611 (707)
.......-.+.|||-|.+....|+.++|||||||++||++| |..|++...- ++ .-..+..+.+.
T Consensus 855 -----y~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~--~e--------I~dlle~geRL 919 (1177)
T KOG1025|consen 855 -----YSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPA--EE--------IPDLLEKGERL 919 (1177)
T ss_pred -----ccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCH--HH--------hhHHHhccccC
Confidence 12223334678999999999999999999999999999999 9999975332 11 11122345556
Q ss_pred CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 005227 612 SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 651 (707)
Q Consensus 612 ~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~ 651 (707)
..|+.|..+++.++.+||..|+..||+++++...+.++.+
T Consensus 920 sqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~ar 959 (1177)
T KOG1025|consen 920 SQPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMAR 959 (1177)
T ss_pred CCCCCccHHHHHHHHHHhccCcccCccHHHHHHHHHHHhc
Confidence 7889999999999999999999999999999988877655
No 132
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=3.5e-39 Score=342.35 Aligned_cols=238 Identities=24% Similarity=0.301 Sum_probs=189.1
Q ss_pred ceEeeeCceEEEEEEe----CCCcEEEEEEeccCCh--hhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEecCC
Q 005227 381 TQIGQGGYGKVYKGIL----PDGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMS 454 (707)
Q Consensus 381 ~~lG~G~fg~Vy~~~~----~~~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~ 454 (707)
+.||+|+||.||++.. .+|+.||+|++..... .....+..|++++++++||||+++++++...+..++||||++
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 81 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR 81 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence 5799999999999874 3689999999875322 223467789999999999999999999999999999999999
Q ss_pred CCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCCCc
Q 005227 455 NGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGI 534 (707)
Q Consensus 455 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 534 (707)
+|+|.+++... ..+++..++.++.||++||+|||+.+ |+||||||+|||+++++.+||+|||+++......
T Consensus 82 ~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~---- 152 (318)
T cd05582 82 GGDLFTRLSKE--VMFTEEDVKFYLAELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE---- 152 (318)
T ss_pred CCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHeEECCCCcEEEeeccCCcccCCCC----
Confidence 99999999653 35899999999999999999999998 9999999999999999999999999987643221
Q ss_pred cccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCCCCCCC
Q 005227 535 VPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYP 614 (707)
Q Consensus 535 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 614 (707)
.......|++.|+|||++.+..++.++|||||||++|||++|+.||...... ....... ......|
T Consensus 153 ---~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~-~~~~~i~----------~~~~~~p 218 (318)
T cd05582 153 ---KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRK-ETMTMIL----------KAKLGMP 218 (318)
T ss_pred ---CceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHH-HHHHHHH----------cCCCCCC
Confidence 1223456899999999999989999999999999999999999999754321 1111110 0111233
Q ss_pred hHHHHHHHHHHHHhcccCCCCCCCHHH
Q 005227 615 SECVEKFIKLALKCCQDETDARPSMSE 641 (707)
Q Consensus 615 ~~~~~~l~~l~~~c~~~~p~~RPt~~~ 641 (707)
...+..+.+++.+|++.+|++||++.+
T Consensus 219 ~~~~~~~~~li~~~l~~~P~~R~~a~~ 245 (318)
T cd05582 219 QFLSPEAQSLLRALFKRNPANRLGAGP 245 (318)
T ss_pred CCCCHHHHHHHHHHhhcCHhHcCCCCC
Confidence 344455666667777777777776655
No 133
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=3.3e-38 Score=328.31 Aligned_cols=256 Identities=28% Similarity=0.505 Sum_probs=209.8
Q ss_pred hcCCCccceEeeeCceEEEEEEeCC------CcEEEEEEeccCChh-hHHHHHHHHHHHHccCCCcceeEEEEEEeCCeE
Q 005227 374 TNNFNSSTQIGQGGYGKVYKGILPD------GTVVAVKRAQEGSLQ-GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQ 446 (707)
Q Consensus 374 ~~~~~~~~~lG~G~fg~Vy~~~~~~------~~~vavK~l~~~~~~-~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~ 446 (707)
.++|.+.+.||+|+||.||+|...+ ++.||||.+...... ..+.+.+|+++++.++|+||+++++++......
T Consensus 4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 83 (280)
T cd05049 4 RDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPP 83 (280)
T ss_pred hHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCe
Confidence 3568889999999999999998633 478999998765443 457899999999999999999999999999999
Q ss_pred EEEEecCCCCCHHHHHhhcC------------CCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCc
Q 005227 447 MLVYEFMSNGTLRDQLSAKS------------KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFT 514 (707)
Q Consensus 447 ~lV~E~~~~gsL~~~l~~~~------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~ 514 (707)
++||||+++++|.+++...+ ...+++..+..++.|++.||+|||+.+ ++||||||+||+++.++.
T Consensus 84 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~---i~h~dlkp~nili~~~~~ 160 (280)
T cd05049 84 IMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQH---FVHRDLATRNCLVGYDLV 160 (280)
T ss_pred EEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCC---eeccccccceEEEcCCCe
Confidence 99999999999999997542 235789999999999999999999998 999999999999999999
Q ss_pred EEEeeecccccCCCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc-CCCCCCCCchhHHHH
Q 005227 515 AKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREV 593 (707)
Q Consensus 515 ~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~ellt-G~~pf~~~~~~~~~~ 593 (707)
+||+|||+++.....+. ........+++.|+|||++.+..++.++|||||||++|||++ |+.||...... +..
T Consensus 161 ~kl~d~g~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~-~~~ 234 (280)
T cd05049 161 VKIGDFGMSRDVYTTDY-----YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNE-EVI 234 (280)
T ss_pred EEECCcccceecccCcc-----eecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHH-HHH
Confidence 99999999975432211 011123345788999999999999999999999999999998 99998654331 111
Q ss_pred HHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 005227 594 NIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELE 647 (707)
Q Consensus 594 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~ 647 (707)
.. +..+.....+..++..+.+++.+||+.+|++||++.++++.|+
T Consensus 235 ~~---------~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~ 279 (280)
T cd05049 235 EC---------ITQGRLLQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQ 279 (280)
T ss_pred HH---------HHcCCcCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence 11 1122233345567788999999999999999999999998875
No 134
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=6e-38 Score=328.06 Aligned_cols=262 Identities=30% Similarity=0.480 Sum_probs=212.5
Q ss_pred hcCCCccceEeeeCceEEEEEEeC------CCcEEEEEEeccCChhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEE
Q 005227 374 TNNFNSSTQIGQGGYGKVYKGILP------DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQM 447 (707)
Q Consensus 374 ~~~~~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~ 447 (707)
.++|.+.+.||+|+||+||++... ++..+|+|.+........+.+.+|++++++++|+||+++++++...+..+
T Consensus 4 ~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 83 (288)
T cd05093 4 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLI 83 (288)
T ss_pred hHHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccE
Confidence 357888999999999999999842 35679999987765555678999999999999999999999999999999
Q ss_pred EEEecCCCCCHHHHHhhcC-----------CCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEE
Q 005227 448 LVYEFMSNGTLRDQLSAKS-----------KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAK 516 (707)
Q Consensus 448 lV~E~~~~gsL~~~l~~~~-----------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~k 516 (707)
+||||+++++|.+++.... ...+++..++.++.|++.||+|||+++ ++||||||+||++++++.+|
T Consensus 84 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~---i~H~dlkp~Nili~~~~~~k 160 (288)
T cd05093 84 MVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQH---FVHRDLATRNCLVGENLLVK 160 (288)
T ss_pred EEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccCcceEEEccCCcEE
Confidence 9999999999999997532 234899999999999999999999998 99999999999999999999
Q ss_pred EeeecccccCCCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc-CCCCCCCCchhHHHHHH
Q 005227 517 VADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNI 595 (707)
Q Consensus 517 l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~ellt-G~~pf~~~~~~~~~~~~ 595 (707)
|+|||+++....... ........++..|+|||++.+..++.++|||||||++|||++ |..||...... +....
T Consensus 161 l~dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~-~~~~~ 234 (288)
T cd05093 161 IGDFGMSRDVYSTDY-----YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNN-EVIEC 234 (288)
T ss_pred eccCCccccccCCce-----eecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH-HHHHH
Confidence 999999976532211 011122335778999999999999999999999999999998 88888654321 11111
Q ss_pred HhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcC
Q 005227 596 AYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMM 653 (707)
Q Consensus 596 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~ 653 (707)
. ..+.....+..++..+.+++.+||+.+|.+||++.++.+.|+.+....
T Consensus 235 i---------~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~~~ 283 (288)
T cd05093 235 I---------TQGRVLQRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAKAS 283 (288)
T ss_pred H---------HcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHhc
Confidence 1 111122233345567999999999999999999999999999887643
No 135
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=6.6e-38 Score=328.24 Aligned_cols=261 Identities=29% Similarity=0.508 Sum_probs=213.7
Q ss_pred cCCCccceEeeeCceEEEEEEeC------CCcEEEEEEeccCChhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEE
Q 005227 375 NNFNSSTQIGQGGYGKVYKGILP------DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 448 (707)
Q Consensus 375 ~~~~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~l 448 (707)
.+|...+.||+|+||.||+|... ++..+++|.+........+.+.+|++++++++|+||+++++++...+..++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIM 84 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEE
Confidence 35777899999999999999842 356799999887666666789999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhcC--------------CCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCc
Q 005227 449 VYEFMSNGTLRDQLSAKS--------------KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFT 514 (707)
Q Consensus 449 V~E~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~ 514 (707)
||||+++++|.+++.... ...+++..++.++.||+.||+|||+++ |+||||||+||++++++.
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~---i~H~dlkp~Nil~~~~~~ 161 (291)
T cd05094 85 VFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQH---FVHRDLATRNCLVGANLL 161 (291)
T ss_pred EEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccCcceEEEccCCc
Confidence 999999999999997542 234889999999999999999999999 999999999999999999
Q ss_pred EEEeeecccccCCCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc-CCCCCCCCchhHHHH
Q 005227 515 AKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREV 593 (707)
Q Consensus 515 ~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~ellt-G~~pf~~~~~~~~~~ 593 (707)
+||+|||+++....... ........++..|+|||++.+..++.++|||||||++|||++ |+.||....... ..
T Consensus 162 ~~l~dfg~a~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~-~~ 235 (291)
T cd05094 162 VKIGDFGMSRDVYSTDY-----YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTE-VI 235 (291)
T ss_pred EEECCCCcccccCCCce-----eecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH-HH
Confidence 99999999976533211 111223446788999999999999999999999999999999 999986544321 11
Q ss_pred HHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcC
Q 005227 594 NIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMM 653 (707)
Q Consensus 594 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~ 653 (707)
.. ...+.....+..++..+.+++.+||+.+|++||++.++++.|+++....
T Consensus 236 ~~---------~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~~~ 286 (291)
T cd05094 236 EC---------ITQGRVLERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGKAT 286 (291)
T ss_pred HH---------HhCCCCCCCCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHhhc
Confidence 11 1112222234445678999999999999999999999999999987643
No 136
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=2.4e-38 Score=335.69 Aligned_cols=197 Identities=28% Similarity=0.387 Sum_probs=161.0
Q ss_pred cceEeeeCceEEEEEEeC---CCcEEEEEEeccCChhhHHHHHHHHHHHHccCCCcceeEEEEEEe--CCeEEEEEecCC
Q 005227 380 STQIGQGGYGKVYKGILP---DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE--EGEQMLVYEFMS 454 (707)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~---~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~--~~~~~lV~E~~~ 454 (707)
..+||+|+||+||+|..+ +++.||+|.+.... ....+.+|+++++.++||||+++++++.. ....++||||++
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~ 83 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG--ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAE 83 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCC--CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeC
Confidence 368999999999999964 45789999887543 23467889999999999999999999853 457899999996
Q ss_pred CCCHHHHHhhc-------CCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEE----cCCCcEEEeeeccc
Q 005227 455 NGTLRDQLSAK-------SKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILL----DHKFTAKVADFGLS 523 (707)
Q Consensus 455 ~gsL~~~l~~~-------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl----~~~~~~kl~DFGla 523 (707)
++|.+++... ....+++..++.++.|++.||+|||+.+ |+||||||+|||+ ++++.+||+|||++
T Consensus 84 -~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a 159 (317)
T cd07867 84 -HDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGFA 159 (317)
T ss_pred -CcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCC---EEcCCCCHHHEEEccCCCCCCcEEEeeccce
Confidence 5888887532 2235889999999999999999999998 9999999999999 56679999999999
Q ss_pred ccCCCCCCCCccccceecccccCCCccchhhhcc-CCCCCchhhHHHHHHHHHHHcCCCCCCCC
Q 005227 524 RLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHG 586 (707)
Q Consensus 524 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDVwSlGvll~elltG~~pf~~~ 586 (707)
+........ ........||..|+|||++.+ ..++.++|||||||++|||+||+.||...
T Consensus 160 ~~~~~~~~~----~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~ 219 (317)
T cd07867 160 RLFNSPLKP----LADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 219 (317)
T ss_pred eccCCCccc----ccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccc
Confidence 865432211 112234568999999999977 45889999999999999999999999643
No 137
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=1.5e-38 Score=338.20 Aligned_cols=241 Identities=21% Similarity=0.325 Sum_probs=187.4
Q ss_pred CCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCCh---hhHHHHHHHHHHHHccC-CCcceeEEEEEEeCCeEEEEE
Q 005227 376 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLH-HRNLVSLVGYCDEEGEQMLVY 450 (707)
Q Consensus 376 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~~lV~ 450 (707)
+|+..+.||+|+||+||+|..+ +++.||+|++..... ...+.+..|..+++.+. |++|+++++++...+..++||
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM 80 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence 4677899999999999999965 789999999875321 22346778899988885 577888999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCC
Q 005227 451 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 530 (707)
Q Consensus 451 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~ 530 (707)
||+++|+|.+++... ..+++..++.++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||+++......
T Consensus 81 Ey~~~g~L~~~i~~~--~~l~~~~~~~i~~qi~~al~~lH~~~---ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~ 155 (323)
T cd05615 81 EYVNGGDLMYHIQQV--GKFKEPQAVFYAAEISVGLFFLHRRG---IIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDG 155 (323)
T ss_pred cCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCCCCEEEeccccccccCCCC
Confidence 999999999998654 35899999999999999999999998 9999999999999999999999999987532211
Q ss_pred CCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCCC
Q 005227 531 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 610 (707)
Q Consensus 531 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 610 (707)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||...... ....... . ..
T Consensus 156 -------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~-~~~~~i~---------~-~~ 217 (323)
T cd05615 156 -------VTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDED-ELFQSIM---------E-HN 217 (323)
T ss_pred -------ccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHH-HHHHHHH---------h-CC
Confidence 1223456899999999999999999999999999999999999999754321 1111110 0 01
Q ss_pred CCCChHHHHHHHHHHHHhcccCCCCCCCH
Q 005227 611 GSYPSECVEKFIKLALKCCQDETDARPSM 639 (707)
Q Consensus 611 ~~~~~~~~~~l~~l~~~c~~~~p~~RPt~ 639 (707)
..+|...+..+.+++.+|++.+|.+|++.
T Consensus 218 ~~~p~~~~~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05615 218 VSYPKSLSKEAVSICKGLMTKHPSKRLGC 246 (323)
T ss_pred CCCCccCCHHHHHHHHHHcccCHhhCCCC
Confidence 12233334455556666666666666653
No 138
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=1.7e-38 Score=338.44 Aligned_cols=206 Identities=21% Similarity=0.236 Sum_probs=168.9
Q ss_pred ccceEeee--CceEEEEEEeC-CCcEEEEEEeccCCh--hhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEecC
Q 005227 379 SSTQIGQG--GYGKVYKGILP-DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 453 (707)
Q Consensus 379 ~~~~lG~G--~fg~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~ 453 (707)
..++||+| +|++||++..+ +|+.||+|++..... ...+.+.+|+++++.++||||+++++++..++..++||||+
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 81 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFM 81 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEecc
Confidence 35789999 78999999964 789999999875432 23456778999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCCC
Q 005227 454 SNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEG 533 (707)
Q Consensus 454 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 533 (707)
++|+|.+++.......+++..++.++.|++.||+|||+.+ |+||||||+|||++.++.++++||+.+..........
T Consensus 82 ~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~---iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~ 158 (327)
T cd08227 82 AYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMG---YVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRL 158 (327)
T ss_pred CCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCChhhEEEecCCcEEEcccchhhccccccccc
Confidence 9999999997655556899999999999999999999998 9999999999999999999999998764432111000
Q ss_pred ccccceecccccCCCccchhhhcc--CCCCCchhhHHHHHHHHHHHcCCCCCCCCc
Q 005227 534 IVPAHVSTVVKGTPGYLDPEYFLT--HKLTDKSDVYSLGVVFLELLTGMQPISHGK 587 (707)
Q Consensus 534 ~~~~~~~~~~~gt~~y~aPE~~~~--~~~s~~sDVwSlGvll~elltG~~pf~~~~ 587 (707)
...........++..|+|||++.+ ..++.++|||||||++|||++|+.||....
T Consensus 159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~ 214 (327)
T cd08227 159 RVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMP 214 (327)
T ss_pred cccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcc
Confidence 000011122346778999999976 468999999999999999999999997543
No 139
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=4.2e-38 Score=323.31 Aligned_cols=251 Identities=30% Similarity=0.466 Sum_probs=205.7
Q ss_pred cCCCccceEeeeCceEEEEEEeCCCcEEEEEEeccCChhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEecCC
Q 005227 375 NNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMS 454 (707)
Q Consensus 375 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~ 454 (707)
++|+..+.||+|+||+||+|...++..||+|.+.... ...+.+.+|+.++++++||||+++++++......++||||++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 82 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMS 82 (256)
T ss_pred HHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCc-ccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCC
Confidence 4577889999999999999998777789999887543 334678999999999999999999999998889999999999
Q ss_pred CCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCCCc
Q 005227 455 NGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGI 534 (707)
Q Consensus 455 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 534 (707)
+|+|.+++..... .+++..++.++.||+.||+|||+.+ ++|+||||+||++++++.+||+|||.++......
T Consensus 83 ~~~l~~~i~~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~---- 154 (256)
T cd05113 83 NGCLLNYLREHGK-RFQPSQLLEMCKDVCEGMAYLESKQ---FIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDE---- 154 (256)
T ss_pred CCcHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHhCC---eeccccCcceEEEcCCCCEEECCCccceecCCCc----
Confidence 9999999976433 6899999999999999999999998 9999999999999999999999999987653221
Q ss_pred cccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHhhcccchhhccCCCCCC
Q 005227 535 VPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSY 613 (707)
Q Consensus 535 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 613 (707)
........++..|+|||++.+..++.++|||||||++|||++ |+.||....... .... +..+.....
T Consensus 155 --~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~-~~~~---------~~~~~~~~~ 222 (256)
T cd05113 155 --YTSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSE-TVEK---------VSQGLRLYR 222 (256)
T ss_pred --eeecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHH-HHHH---------HhcCCCCCC
Confidence 111122335678999999998889999999999999999999 999986543311 1111 111222223
Q ss_pred ChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 005227 614 PSECVEKFIKLALKCCQDETDARPSMSEVMREL 646 (707)
Q Consensus 614 ~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L 646 (707)
+...+..+.+++.+||+.+|.+||++.++++.+
T Consensus 223 ~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~ 255 (256)
T cd05113 223 PHLASEKVYAIMYSCWHEKAEERPTFQQLLSSI 255 (256)
T ss_pred CCCCCHHHHHHHHHHcCCCcccCCCHHHHHHhh
Confidence 344567889999999999999999999998765
No 140
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.2e-38 Score=319.93 Aligned_cols=260 Identities=23% Similarity=0.368 Sum_probs=202.7
Q ss_pred cCCCccceEeeeCceEEEEEEeCCCcEEEEEEeccCChhhHHHHHHHHHHHHcc--CCCcceeEEEEEEeCC----eEEE
Q 005227 375 NNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL--HHRNLVSLVGYCDEEG----EQML 448 (707)
Q Consensus 375 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l--~h~nIv~l~~~~~~~~----~~~l 448 (707)
.+....+.||+|.||.||+|.| .|+.||||++.. .+++.+.+|.++++.+ +|+||+.|++.-..+. +.||
T Consensus 211 rqI~L~e~IGkGRyGEVwrG~w-rGe~VAVKiF~s---rdE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLwL 286 (513)
T KOG2052|consen 211 RQIVLQEIIGKGRFGEVWRGRW-RGEDVAVKIFSS---RDERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLWL 286 (513)
T ss_pred heeEEEEEecCccccceeeccc-cCCceEEEEecc---cchhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEEE
Confidence 4566789999999999999999 478999999964 4566888899998874 9999999999864432 6899
Q ss_pred EEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHh-----CCCCCeEecCCCCCCEEEcCCCcEEEeeeccc
Q 005227 449 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHT-----EADPPVFHRDIKASNILLDHKFTAKVADFGLS 523 (707)
Q Consensus 449 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~-----~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla 523 (707)
|++|.++|||+|+|.+ ..++....++++..+|.||++||. +++|.|.|||||+.||||..++.+.|+|+|+|
T Consensus 287 vTdYHe~GSL~DyL~r---~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGLA 363 (513)
T KOG2052|consen 287 VTDYHEHGSLYDYLNR---NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 363 (513)
T ss_pred eeecccCCcHHHHHhh---ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeeceee
Confidence 9999999999999965 458999999999999999999996 57899999999999999999999999999999
Q ss_pred ccCCCCCCCCccccceecccccCCCccchhhhccCC----CC--CchhhHHHHHHHHHHHcC----------CCCCCCC-
Q 005227 524 RLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHK----LT--DKSDVYSLGVVFLELLTG----------MQPISHG- 586 (707)
Q Consensus 524 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~s--~~sDVwSlGvll~elltG----------~~pf~~~- 586 (707)
......... . .-.....+||.+|||||++...- +. ..+||||||.++||+..+ +.||.+.
T Consensus 364 v~h~~~t~~--i-di~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~V 440 (513)
T KOG2052|consen 364 VRHDSDTDT--I-DIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVV 440 (513)
T ss_pred EEecccCCc--c-cCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCC
Confidence 765443211 0 12234568999999999996532 21 259999999999999864 3566432
Q ss_pred --chhHHHHHHHhhcccchhhccCCCCC-----CChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 005227 587 --KNIVREVNIAYQSSMMFSVIDGNMGS-----YPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 651 (707)
Q Consensus 587 --~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~ 651 (707)
+...++.....-. ++.++. ...++...+.++|..||..+|..|-|+-.+.+.+.++.+
T Consensus 441 p~DPs~eeMrkVVCv-------~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~~ 505 (513)
T KOG2052|consen 441 PSDPSFEEMRKVVCV-------QKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLSN 505 (513)
T ss_pred CCCCCHHHHhcceee-------cccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHhc
Confidence 2222222221111 122222 235788899999999999999999999888888877654
No 141
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=6.8e-38 Score=322.92 Aligned_cols=256 Identities=31% Similarity=0.470 Sum_probs=208.7
Q ss_pred hcCCCccceEeeeCceEEEEEEeCCCcEEEEEEeccCChhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEecC
Q 005227 374 TNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 453 (707)
Q Consensus 374 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~ 453 (707)
.++|++.++||+|+||+||+|.+++...||+|++.... ...+.+.+|++++++++|+||+++++++. ....++||||+
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~ 82 (262)
T cd05071 5 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEYM 82 (262)
T ss_pred hHHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCc-cCHHHHHHHHHHHHhCCCCCcceEEEEEC-CCCcEEEEEcC
Confidence 45789999999999999999998777789999987533 23467899999999999999999999875 45679999999
Q ss_pred CCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCCC
Q 005227 454 SNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEG 533 (707)
Q Consensus 454 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 533 (707)
++|+|.+++.......+++..+..++.|+++||+|||+.+ ++||||||+||++++++.+||+|||.++.......
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~---i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~-- 157 (262)
T cd05071 83 SKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-- 157 (262)
T ss_pred CCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCC---ccccccCcccEEEcCCCcEEeccCCceeecccccc--
Confidence 9999999997655556899999999999999999999998 99999999999999999999999999976543221
Q ss_pred ccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHhhcccchhhccCCCCC
Q 005227 534 IVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGS 612 (707)
Q Consensus 534 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 612 (707)
.......++..|+|||+..+..++.++|||||||++|||++ |+.||....... .... ........
T Consensus 158 ----~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~-~~~~---------~~~~~~~~ 223 (262)
T cd05071 158 ----TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE-VLDQ---------VERGYRMP 223 (262)
T ss_pred ----ccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHH-HHHH---------HhcCCCCC
Confidence 11122346678999999999999999999999999999999 888886543211 1111 11111122
Q ss_pred CChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhh
Q 005227 613 YPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIW 650 (707)
Q Consensus 613 ~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~ 650 (707)
.+.+++..+.+++.+|++.+|++||++.++.+.|+...
T Consensus 224 ~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~~ 261 (262)
T cd05071 224 CPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF 261 (262)
T ss_pred CccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHhc
Confidence 34566788999999999999999999999999988653
No 142
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=2.7e-38 Score=330.13 Aligned_cols=201 Identities=27% Similarity=0.410 Sum_probs=175.1
Q ss_pred CCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCChh---hHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEe
Q 005227 376 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ---GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 451 (707)
Q Consensus 376 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~---~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E 451 (707)
.|+..+.||+|+||+||+|... +++.||+|.+...... ....+.+|++++++++|+||+++.+++..++..++|||
T Consensus 1 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e 80 (285)
T cd05632 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEE
Confidence 3677889999999999999964 7899999998654322 23457889999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCC
Q 005227 452 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 531 (707)
Q Consensus 452 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 531 (707)
|+++++|.+++.......+++..+..++.|++.||.|||+.+ |+||||||+||++++++.+||+|||++.......
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~---iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~- 156 (285)
T cd05632 81 IMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHREN---TVYRDLKPENILLDDYGHIRISDLGLAVKIPEGE- 156 (285)
T ss_pred eccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecCCCHHHEEECCCCCEEEecCCcceecCCCC-
Confidence 999999999987665567999999999999999999999998 9999999999999999999999999987543211
Q ss_pred CCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCc
Q 005227 532 EGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 587 (707)
Q Consensus 532 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~~ 587 (707)
......|+..|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 157 -------~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~ 205 (285)
T cd05632 157 -------SIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRK 205 (285)
T ss_pred -------cccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCC
Confidence 1123468999999999999999999999999999999999999997543
No 143
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=1.6e-38 Score=334.59 Aligned_cols=283 Identities=23% Similarity=0.374 Sum_probs=207.0
Q ss_pred cCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCCh-hhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEec
Q 005227 375 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 452 (707)
Q Consensus 375 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~ 452 (707)
++|...+.||+|+||.||+|..+ +++.||+|.+..... .....+.+|+.+++.++|+||+++++++...+..++||||
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~ 85 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 85 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEec
Confidence 57889999999999999999975 688999999864332 2345678899999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCC
Q 005227 453 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 532 (707)
Q Consensus 453 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 532 (707)
++ ++|.+++... ...+++..++.++.|+++||+|||+.+ |+|+||||+||++++++.+||+|||++.......
T Consensus 86 ~~-~~l~~~l~~~-~~~~~~~~~~~~~~qi~~aL~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~-- 158 (301)
T cd07873 86 LD-KDLKQYLDDC-GNSINMHNVKLFLFQLLRGLNYCHRRK---VLHRDLKPQNLLINERGELKLADFGLARAKSIPT-- 158 (301)
T ss_pred cc-cCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCHHHEEECCCCcEEECcCcchhccCCCC--
Confidence 96 6999988654 335889999999999999999999998 9999999999999999999999999997543221
Q ss_pred CccccceecccccCCCccchhhhcc-CCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCCCC
Q 005227 533 GIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 611 (707)
Q Consensus 533 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 611 (707)
.......++..|+|||++.+ ..++.++|||||||++|||++|+.||..... .+...... ... .
T Consensus 159 -----~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~-~~~~~~~~------~~~----~ 222 (301)
T cd07873 159 -----KTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTV-EEQLHFIF------RIL----G 222 (301)
T ss_pred -----CcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHH------HHc----C
Confidence 11223356889999999876 4578899999999999999999999965432 12111110 000 0
Q ss_pred CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCCCCCCCCC
Q 005227 612 SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSS 689 (707)
Q Consensus 612 ~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f~~ 689 (707)
.........+......+....|..++. .+. ...+..++...++|.+||+.||++|+|++|+|+||||..
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~---~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h~~f~~ 291 (301)
T cd07873 223 TPTEETWPGILSNEEFKSYNYPKYRAD------CLH---NHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHPYFHC 291 (301)
T ss_pred CCChhhchhhhccccccccccCccccc------cHH---hhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcCccccc
Confidence 001111111110000000001111110 000 112233445678999999999999999999999999964
No 144
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=5.4e-38 Score=323.12 Aligned_cols=254 Identities=30% Similarity=0.480 Sum_probs=208.5
Q ss_pred hcCCCccceEeeeCceEEEEEEeCCCcEEEEEEeccCChhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEecC
Q 005227 374 TNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 453 (707)
Q Consensus 374 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~ 453 (707)
.++|++.+.||+|+||.||+|..+++..||+|.+..... ..+.+.+|+.++++++|+|++++++++. ....++||||+
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~ 82 (260)
T cd05070 5 RESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTM-SPESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVTEYM 82 (260)
T ss_pred hHHhhhhheeccccCceEEEEEecCCceeEEEEecCCCC-CHHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEEEec
Confidence 457888999999999999999988888899999876433 3467999999999999999999999885 45689999999
Q ss_pred CCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCCC
Q 005227 454 SNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEG 533 (707)
Q Consensus 454 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 533 (707)
++++|.++++......+++..++.++.|++.||+|||+.+ |+||||||+||++++++.++|+|||++........
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~---i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~-- 157 (260)
T cd05070 83 SKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMN---YIHRDLRSANILVGDGLVCKIADFGLARLIEDNEY-- 157 (260)
T ss_pred CCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCccceEEEeCCceEEeCCceeeeeccCccc--
Confidence 9999999997755566899999999999999999999998 99999999999999999999999999976543221
Q ss_pred ccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHhhcccchhhccCCCCC
Q 005227 534 IVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGS 612 (707)
Q Consensus 534 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 612 (707)
.......++..|+|||++.+..++.++||||||+++|||++ |..||..... .+.... +......+
T Consensus 158 ----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~-~~~~~~---------~~~~~~~~ 223 (260)
T cd05070 158 ----TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNN-REVLEQ---------VERGYRMP 223 (260)
T ss_pred ----ccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCH-HHHHHH---------HHcCCCCC
Confidence 11112235678999999998899999999999999999999 8888865332 111111 11111223
Q ss_pred CChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 005227 613 YPSECVEKFIKLALKCCQDETDARPSMSEVMRELES 648 (707)
Q Consensus 613 ~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~ 648 (707)
.+.+.+..+.+++.+|++.+|++|||+.++.+.|+.
T Consensus 224 ~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 224 CPQDCPISLHELMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred CCCcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 455667789999999999999999999999988764
No 145
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=6.5e-38 Score=341.25 Aligned_cols=262 Identities=25% Similarity=0.379 Sum_probs=209.0
Q ss_pred HHhcCCCccceEeeeCceEEEEEEeC------CCcEEEEEEeccCChh-hHHHHHHHHHHHHccC-CCcceeEEEEEEeC
Q 005227 372 LATNNFNSSTQIGQGGYGKVYKGILP------DGTVVAVKRAQEGSLQ-GEKEFLTEIQFLSRLH-HRNLVSLVGYCDEE 443 (707)
Q Consensus 372 ~~~~~~~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~l~~~~~~-~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~ 443 (707)
...++|.+.+.||+|+||.||+|... .+..||||++...... ..+.+.+|+++++++. ||||++++++|...
T Consensus 34 ~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~ 113 (400)
T cd05105 34 FPRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKS 113 (400)
T ss_pred ccccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccC
Confidence 34567888999999999999999852 2347999999754332 3467899999999996 99999999999999
Q ss_pred CeEEEEEecCCCCCHHHHHhhcC---------------------------------------------------------
Q 005227 444 GEQMLVYEFMSNGTLRDQLSAKS--------------------------------------------------------- 466 (707)
Q Consensus 444 ~~~~lV~E~~~~gsL~~~l~~~~--------------------------------------------------------- 466 (707)
+..++||||+++|+|.++++...
T Consensus 114 ~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (400)
T cd05105 114 GPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLE 193 (400)
T ss_pred CceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhh
Confidence 99999999999999999886521
Q ss_pred -------------------------------------CCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEE
Q 005227 467 -------------------------------------KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILL 509 (707)
Q Consensus 467 -------------------------------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl 509 (707)
...+++..+..++.|+++||+|||+.+ |+||||||+|||+
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivH~dikp~Nill 270 (400)
T cd05105 194 IKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKN---CVHRDLAARNVLL 270 (400)
T ss_pred hhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChHhEEE
Confidence 124778889999999999999999998 9999999999999
Q ss_pred cCCCcEEEeeecccccCCCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc-CCCCCCCCch
Q 005227 510 DHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKN 588 (707)
Q Consensus 510 ~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~ellt-G~~pf~~~~~ 588 (707)
++++.+||+|||+++....... ........++..|+|||.+.+..++.++|||||||++|||++ |..||.....
T Consensus 271 ~~~~~~kL~DfGla~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~ 345 (400)
T cd05105 271 AQGKIVKICDFGLARDIMHDSN-----YVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIV 345 (400)
T ss_pred eCCCEEEEEeCCcceecccccc-----ccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccch
Confidence 9999999999999986532211 111223346788999999999999999999999999999997 8899865322
Q ss_pred hHHHHHHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhh
Q 005227 589 IVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIW 650 (707)
Q Consensus 589 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~ 650 (707)
....... +..+.....+..++..+.+++.+||+.+|++||++.++.+.|+.+.
T Consensus 346 ~~~~~~~---------~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~ 398 (400)
T cd05105 346 DSTFYNK---------IKSGYRMAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLL 398 (400)
T ss_pred hHHHHHH---------HhcCCCCCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHc
Confidence 1111111 1111122344566788999999999999999999999999998754
No 146
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=2.1e-38 Score=340.03 Aligned_cols=282 Identities=24% Similarity=0.373 Sum_probs=206.2
Q ss_pred HHhcCCCccceEeeeCceEEEEEEe-CCCcEEEEEEeccCCh--hhHHHHHHHHHHHHccCCCcceeEEEEEEeC-----
Q 005227 372 LATNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE----- 443 (707)
Q Consensus 372 ~~~~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~----- 443 (707)
...++|+..+.||+|+||+||+|.. .+++.||||++..... ...+.+.+|++++++++|+||+++++++...
T Consensus 12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07878 12 EVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIEN 91 (343)
T ss_pred hhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccc
Confidence 3457899999999999999999996 4788999999875322 2345678899999999999999999987533
Q ss_pred -CeEEEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecc
Q 005227 444 -GEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGL 522 (707)
Q Consensus 444 -~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGl 522 (707)
...++++|++ +++|.+++.. ..+++..+..++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||+
T Consensus 92 ~~~~~~~~~~~-~~~l~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~~---ivHrdikp~Nil~~~~~~~kl~Dfg~ 164 (343)
T cd07878 92 FNEVYLVTNLM-GADLNNIVKC---QKLSDEHVQFLIYQLLRGLKYIHSAG---IIHRDLKPSNVAVNEDCELRILDFGL 164 (343)
T ss_pred cCcEEEEeecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eecccCChhhEEECCCCCEEEcCCcc
Confidence 3578999998 7899888753 34899999999999999999999999 99999999999999999999999999
Q ss_pred cccCCCCCCCCccccceecccccCCCccchhhhcc-CCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhccc
Q 005227 523 SRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSM 601 (707)
Q Consensus 523 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~ 601 (707)
++..... .....||..|+|||++.+ ..++.++|||||||++|||++|+.||...... +.+.....
T Consensus 165 ~~~~~~~----------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-~~~~~~~~--- 230 (343)
T cd07878 165 ARQADDE----------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYI-DQLKRIME--- 230 (343)
T ss_pred ceecCCC----------cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHH-HHHHHHHH---
Confidence 9865321 123468999999999987 57899999999999999999999999654332 11111100
Q ss_pred chhhccCCCCCCChHHHHHHH-HHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCc
Q 005227 602 MFSVIDGNMGSYPSECVEKFI-KLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSS 680 (707)
Q Consensus 602 ~~~~~~~~~~~~~~~~~~~l~-~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e 680 (707)
.. ...+.+....+. .........-|.. |. .+ +. ..+...++...+|+.+||..||++|+|++|
T Consensus 231 ---~~----~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~----~~---~~~~~~~~~~~~li~~mL~~dp~~R~s~~e 294 (343)
T cd07878 231 ---VV----GTPSPEVLKKISSEHARKYIQSLPHM-PQ-QD----LK---KIFRGANPLAIDLLEKMLVLDSDKRISASE 294 (343)
T ss_pred ---Hh----CCCCHHHHHhcchhhHHHHhhccccc-cc-hh----HH---HhccCCCHHHHHHHHHHcCCChhhCCCHHH
Confidence 00 001111111110 0011111111110 10 00 11 111223345678999999999999999999
Q ss_pred CCCCCCCCCC
Q 005227 681 MLKHPYVSSD 690 (707)
Q Consensus 681 ~L~Hp~f~~~ 690 (707)
+|+||||...
T Consensus 295 ll~hp~~~~~ 304 (343)
T cd07878 295 ALAHPYFSQY 304 (343)
T ss_pred HhcCcchhcc
Confidence 9999999764
No 147
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=4.7e-38 Score=333.24 Aligned_cols=283 Identities=20% Similarity=0.301 Sum_probs=211.1
Q ss_pred ceEeeeCceEEEEEEeC-CCcEEEEEEeccCCh---hhHHHHHHHHHHHHcc-CCCcceeEEEEEEeCCeEEEEEecCCC
Q 005227 381 TQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQMLVYEFMSN 455 (707)
Q Consensus 381 ~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lV~E~~~~ 455 (707)
+.||+|+||.||+|... +++.||||+++.... ...+.+..|..++... +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g 80 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999965 688999999875321 2234456677777654 899999999999999999999999999
Q ss_pred CCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCCCcc
Q 005227 456 GTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIV 535 (707)
Q Consensus 456 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 535 (707)
|+|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 81 g~L~~~~~~~~--~~~~~~~~~~~~qi~~al~~LH~~~---ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~----- 150 (316)
T cd05592 81 GDLMFHIQSSG--RFDEARARFYAAEIICGLQFLHKKG---IIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGE----- 150 (316)
T ss_pred CcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---EEeCCCCHHHeEECCCCCEEEccCcCCeECCCCC-----
Confidence 99999986543 5899999999999999999999998 9999999999999999999999999997543211
Q ss_pred ccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCCCCCCCh
Q 005227 536 PAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPS 615 (707)
Q Consensus 536 ~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 615 (707)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||..... .+.... +......++.
T Consensus 151 --~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~-~~~~~~----------i~~~~~~~~~ 217 (316)
T cd05592 151 --GKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDE-DELFDS----------ILNDRPHFPR 217 (316)
T ss_pred --CccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCH-HHHHHH----------HHcCCCCCCC
Confidence 122345689999999999999999999999999999999999999975433 111111 1112233455
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCHH-HHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCCCCCCCCCCCCCC
Q 005227 616 ECVEKFIKLALKCCQDETDARPSMS-EVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSSDVSGS 694 (707)
Q Consensus 616 ~~~~~l~~l~~~c~~~~p~~RPt~~-~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f~~~~~~~ 694 (707)
....++.+++.+|++.+|.+||++. ++.+. . .+...+ .+.+.+ -...|.-++.......+++|......+
T Consensus 218 ~~~~~~~~ll~~~l~~~P~~R~~~~~~l~~h-~----~~~~~~---~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (316)
T cd05592 218 WISKEAKDCLSKLFERDPTKRLGVDGDIRQH-P----FFRGID---WERLEK-REIPPPFKPKVKSPSDASNFDREFTNE 288 (316)
T ss_pred CCCHHHHHHHHHHccCCHHHcCCChHHHHcC-c----ccCCCC---HHHHHh-CCCCCCcCCCCCCcchhhhcCcccccc
Confidence 5667788999999999999999875 33221 0 000000 001111 123455566667777777876555543
Q ss_pred C
Q 005227 695 N 695 (707)
Q Consensus 695 ~ 695 (707)
+
T Consensus 289 ~ 289 (316)
T cd05592 289 K 289 (316)
T ss_pred c
Confidence 3
No 148
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=5.6e-38 Score=326.28 Aligned_cols=258 Identities=28% Similarity=0.480 Sum_probs=207.2
Q ss_pred HHhcCCCccceEeeeCceEEEEEEeC------CCcEEEEEEeccCC-hhhHHHHHHHHHHHHccCCCcceeEEEEEEeCC
Q 005227 372 LATNNFNSSTQIGQGGYGKVYKGILP------DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG 444 (707)
Q Consensus 372 ~~~~~~~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~ 444 (707)
..+++|+..+.||+|+||.||+|.++ ++..||||++.... .....++.+|+.+++.++|+||+++++++....
T Consensus 3 ~~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~ 82 (277)
T cd05062 3 VAREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQ 82 (277)
T ss_pred ccHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC
Confidence 35678999999999999999999853 35679999986533 233457889999999999999999999999999
Q ss_pred eEEEEEecCCCCCHHHHHhhcC--------CCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEE
Q 005227 445 EQMLVYEFMSNGTLRDQLSAKS--------KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAK 516 (707)
Q Consensus 445 ~~~lV~E~~~~gsL~~~l~~~~--------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~k 516 (707)
..++||||+++++|.+++.... ...+++..+..++.|++.||+|||+.+ ++|+||||+||++++++.+|
T Consensus 83 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---~vH~dlkp~Nil~~~~~~~~ 159 (277)
T cd05062 83 PTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVK 159 (277)
T ss_pred CeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCcchheEEEcCCCCEE
Confidence 9999999999999999997532 124678889999999999999999988 99999999999999999999
Q ss_pred EeeecccccCCCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc-CCCCCCCCchhHHHHHH
Q 005227 517 VADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNI 595 (707)
Q Consensus 517 l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~ellt-G~~pf~~~~~~~~~~~~ 595 (707)
|+|||+++....... ........++..|+|||++.+..++.++|||||||++|||++ |..||..... ......
T Consensus 160 l~dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~-~~~~~~ 233 (277)
T cd05062 160 IGDFGMTRDIYETDY-----YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSN-EQVLRF 233 (277)
T ss_pred ECCCCCccccCCcce-----eecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCH-HHHHHH
Confidence 999999876533221 011112345678999999999999999999999999999999 6888864432 111111
Q ss_pred HhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 005227 596 AYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELE 647 (707)
Q Consensus 596 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~ 647 (707)
+........+..++..+.+++.+|++.+|++||++.++++.++
T Consensus 234 ---------~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~ 276 (277)
T cd05062 234 ---------VMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 276 (277)
T ss_pred ---------HHcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhh
Confidence 1122223345556778999999999999999999999998875
No 149
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=1.4e-37 Score=321.11 Aligned_cols=257 Identities=29% Similarity=0.481 Sum_probs=209.7
Q ss_pred hcCCCccceEeeeCceEEEEEEeC----CCcEEEEEEeccCChh-hHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEE
Q 005227 374 TNNFNSSTQIGQGGYGKVYKGILP----DGTVVAVKRAQEGSLQ-GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 448 (707)
Q Consensus 374 ~~~~~~~~~lG~G~fg~Vy~~~~~----~~~~vavK~l~~~~~~-~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~l 448 (707)
.++|+..+.||+|+||+||+|.+. +...||||.+...... ....+.+|+.++++++|+||+++++++...+..++
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~i 82 (266)
T cd05033 3 PSYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMI 82 (266)
T ss_pred hHHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEE
Confidence 357889999999999999999974 2457999998754333 34678999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCC
Q 005227 449 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 528 (707)
Q Consensus 449 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~ 528 (707)
||||+++++|.+++.... ..+++..++.++.|++.||+|||+.+ |+|+||||+||++++++.+||+|||+++....
T Consensus 83 v~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~Lh~~~---i~H~di~p~nili~~~~~~~l~dfg~~~~~~~ 158 (266)
T cd05033 83 ITEYMENGSLDKFLREND-GKFTVGQLVGMLRGIASGMKYLSEMN---YVHRDLAARNILVNSNLVCKVSDFGLSRRLED 158 (266)
T ss_pred EEEcCCCCCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCcceEEEcCCCCEEECccchhhcccc
Confidence 999999999999997643 36899999999999999999999988 99999999999999999999999999987642
Q ss_pred CCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHhhcccchhhcc
Q 005227 529 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVID 607 (707)
Q Consensus 529 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 607 (707)
... ........++..|+|||.+.+..++.++||||||+++|||++ |..||........ .. .+..
T Consensus 159 ~~~-----~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~-~~---------~~~~ 223 (266)
T cd05033 159 SEA-----TYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDV-IK---------AVED 223 (266)
T ss_pred ccc-----ceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHHHH-HH---------HHHc
Confidence 111 111122335678999999999999999999999999999998 9999865433211 11 1111
Q ss_pred CCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 005227 608 GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 649 (707)
Q Consensus 608 ~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~ 649 (707)
....+.+..++..+.+++.+||+.+|++||++.++++.|+++
T Consensus 224 ~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 224 GYRLPPPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred CCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 112233455677899999999999999999999999998864
No 150
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=2.5e-38 Score=337.84 Aligned_cols=202 Identities=28% Similarity=0.332 Sum_probs=172.5
Q ss_pred cCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCCh---hhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEE
Q 005227 375 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 450 (707)
Q Consensus 375 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~ 450 (707)
++|++.++||+|+||+||++..+ +++.||+|++..... .....+.+|+.++..++|+||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM 80 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence 47889999999999999999975 578999999864221 12345788999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCC
Q 005227 451 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 530 (707)
Q Consensus 451 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~ 530 (707)
||+++|+|.+++.+. ...+++..++.++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||++.......
T Consensus 81 ey~~~g~L~~~l~~~-~~~l~~~~~~~~~~qi~~al~~lH~~~---iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~ 156 (332)
T cd05623 81 DYYVGGDLLTLLSKF-EDRLPEDMARFYLAEMVIAIDSVHQLH---YVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDG 156 (332)
T ss_pred eccCCCcHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHEEECCCCCEEEeecchheecccCC
Confidence 999999999999753 235899999999999999999999998 9999999999999999999999999987543221
Q ss_pred CCCccccceecccccCCCccchhhhc-----cCCCCCchhhHHHHHHHHHHHcCCCCCCCC
Q 005227 531 IEGIVPAHVSTVVKGTPGYLDPEYFL-----THKLTDKSDVYSLGVVFLELLTGMQPISHG 586 (707)
Q Consensus 531 ~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~s~~sDVwSlGvll~elltG~~pf~~~ 586 (707)
........||+.|+|||++. ...++.++|||||||++|||++|+.||...
T Consensus 157 ------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~ 211 (332)
T cd05623 157 ------TVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAE 211 (332)
T ss_pred ------cceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCC
Confidence 11223456899999999986 346888999999999999999999999643
No 151
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=1e-37 Score=320.99 Aligned_cols=255 Identities=27% Similarity=0.455 Sum_probs=209.5
Q ss_pred HhcCCCccceEeeeCceEEEEEEeCCCcEEEEEEeccCChhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEec
Q 005227 373 ATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 452 (707)
Q Consensus 373 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~ 452 (707)
..++|++.++||+|+||.||+|..++++.||+|.+..... ....+.+|+.++++++|+||+++++++. .+..++||||
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~ 81 (260)
T cd05067 4 PRETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSM-SPEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIYIITEY 81 (260)
T ss_pred chHHceeeeeeccCccceEEeeecCCCceEEEEEecCCCC-cHHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcEEEEEc
Confidence 3467888999999999999999988899999999876443 3467899999999999999999999874 4578999999
Q ss_pred CCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCC
Q 005227 453 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 532 (707)
Q Consensus 453 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 532 (707)
+++++|.+++.......+++..+..++.|++.||+|||+.+ ++||||||+||++++++.++|+|||++........
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~---i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~- 157 (260)
T cd05067 82 MENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKN---YIHRDLRAANILVSETLCCKIADFGLARLIEDNEY- 157 (260)
T ss_pred CCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCC---eecccccHHhEEEcCCCCEEEccCcceeecCCCCc-
Confidence 99999999997766667899999999999999999999998 99999999999999999999999999976542211
Q ss_pred CccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHhhcccchhhccCCCC
Q 005227 533 GIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 611 (707)
Q Consensus 533 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 611 (707)
.......++..|+|||++.+..++.++||||||+++||+++ |+.||...... +..... ......
T Consensus 158 -----~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~-~~~~~~---------~~~~~~ 222 (260)
T cd05067 158 -----TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNP-EVIQNL---------ERGYRM 222 (260)
T ss_pred -----ccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChH-HHHHHH---------HcCCCC
Confidence 11122345678999999999899999999999999999999 99999654321 111111 111112
Q ss_pred CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 005227 612 SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELES 648 (707)
Q Consensus 612 ~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~ 648 (707)
..+...+.++.+++.+|++.+|++||++.++...|+.
T Consensus 223 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 223 PRPDNCPEELYELMRLCWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence 2344456789999999999999999999999988874
No 152
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=3e-38 Score=329.53 Aligned_cols=282 Identities=25% Similarity=0.384 Sum_probs=209.8
Q ss_pred CCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCCh--hhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEec
Q 005227 376 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 452 (707)
Q Consensus 376 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~ 452 (707)
+|++.+.||+|+||.||+|... +++.||+|++..... ...+.+.+|+.++++++|+||+++++++......++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~ 80 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEY 80 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEecc
Confidence 5788999999999999999965 789999999876442 2346789999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCC
Q 005227 453 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 532 (707)
Q Consensus 453 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 532 (707)
+ +++|.+++.... ..+++..++.++.||++||+|||+.+ ++|+||||+||++++++.++|+|||++........
T Consensus 81 ~-~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~- 154 (286)
T cd07832 81 M-PSDLSEVLRDEE-RPLPEAQVKSYMRMLLKGVAYMHANG---IMHRDLKPANLLISADGVLKIADFGLARLFSEEEP- 154 (286)
T ss_pred c-CCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCcCHHHEEEcCCCcEEEeeeeecccccCCCC-
Confidence 9 999999987644 56999999999999999999999998 99999999999999999999999999986643221
Q ss_pred CccccceecccccCCCccchhhhccC-CCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCCCC
Q 005227 533 GIVPAHVSTVVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 611 (707)
Q Consensus 533 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 611 (707)
.......|+..|+|||.+.+. .++.++||||+||++|||++|..+|....+. ........ . ..
T Consensus 155 -----~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~-~~~~~~~~------~----~~ 218 (286)
T cd07832 155 -----RLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDI-EQLAIVFR------T----LG 218 (286)
T ss_pred -----CccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHH-HHHHHHHH------H----cC
Confidence 112334688999999998754 4688999999999999999997777544332 11111110 0 00
Q ss_pred CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCCCCCCCC
Q 005227 612 SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVS 688 (707)
Q Consensus 612 ~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f~ 688 (707)
.........+.++....-...+...+.. + ....++.+....+++.+||..+|++|||++++|+||||.
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~---~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h~~~~ 286 (286)
T cd07832 219 TPNEETWPGLTSLPDYNKITFPESKPIP------L---EEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRHPYFT 286 (286)
T ss_pred CCChHHHhhccCcchhhcccCCCCCcch------H---HHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhCcCcC
Confidence 0011111111111000000011111111 1 112344456667899999999999999999999999995
No 153
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=2.8e-38 Score=336.42 Aligned_cols=240 Identities=23% Similarity=0.308 Sum_probs=186.0
Q ss_pred ceEeeeCceEEEEEEeC-CCcEEEEEEeccCCh---hhHHHHHHHHH-HHHccCCCcceeEEEEEEeCCeEEEEEecCCC
Q 005227 381 TQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQ-FLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSN 455 (707)
Q Consensus 381 ~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~---~~~~~~~~E~~-~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~ 455 (707)
+.||+|+||+||+|... +++.||+|++..... .....+..|.. +++.++|+||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING 80 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence 46999999999999975 678999999875321 12234444544 56788999999999999999999999999999
Q ss_pred CCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCCCcc
Q 005227 456 GTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIV 535 (707)
Q Consensus 456 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 535 (707)
|+|.+++... ..+.+..+..++.||++||+|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 81 ~~L~~~~~~~--~~~~~~~~~~~~~qi~~~L~~lH~~g---iiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~----- 150 (325)
T cd05602 81 GELFYHLQRE--RCFLEPRARFYAAEIASALGYLHSLN---IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHN----- 150 (325)
T ss_pred CcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEECCCCCEEEccCCCCcccccCC-----
Confidence 9999999654 34788888999999999999999999 9999999999999999999999999987532211
Q ss_pred ccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCCCCCCCh
Q 005227 536 PAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPS 615 (707)
Q Consensus 536 ~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 615 (707)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||...... +....... . ....+.
T Consensus 151 --~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-~~~~~i~~---------~-~~~~~~ 217 (325)
T cd05602 151 --GTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTA-EMYDNILN---------K-PLQLKP 217 (325)
T ss_pred --CCcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHH-HHHHHHHh---------C-CcCCCC
Confidence 1223456899999999999999999999999999999999999999754332 11111110 0 111223
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCHHHHH
Q 005227 616 ECVEKFIKLALKCCQDETDARPSMSEVM 643 (707)
Q Consensus 616 ~~~~~l~~l~~~c~~~~p~~RPt~~~v~ 643 (707)
..+..+.+++.+|++.+|.+|++..+.+
T Consensus 218 ~~~~~~~~li~~~l~~~p~~R~~~~~~~ 245 (325)
T cd05602 218 NITNSARHLLEGLLQKDRTKRLGAKDDF 245 (325)
T ss_pred CCCHHHHHHHHHHcccCHHHCCCCCCCH
Confidence 3445666777777777777777766443
No 154
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=1.2e-37 Score=319.95 Aligned_cols=251 Identities=27% Similarity=0.456 Sum_probs=204.6
Q ss_pred cCCCccceEeeeCceEEEEEEeCCCcEEEEEEeccCChhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEecCC
Q 005227 375 NNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMS 454 (707)
Q Consensus 375 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~ 454 (707)
.+|+..+.||+|+||.||+|.++++..+|+|.+..... ....+.+|++++++++|+||+++++++...+..++||||++
T Consensus 4 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~ 82 (256)
T cd05059 4 SELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGAM-SEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMA 82 (256)
T ss_pred HHcchhhhhccCCCceEEEeEecCCccEEEEEeccCCC-CHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCC
Confidence 35778899999999999999988778899999865332 34578899999999999999999999999999999999999
Q ss_pred CCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCCCc
Q 005227 455 NGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGI 534 (707)
Q Consensus 455 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 534 (707)
+++|.+++.... ..+++..++.++.|++.||+|||+.+ |+||||||+||++++++.+||+|||+++.......
T Consensus 83 ~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~--- 155 (256)
T cd05059 83 NGCLLNYLRERK-GKLGTEWLLDMCSDVCEAMEYLESNG---FIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQY--- 155 (256)
T ss_pred CCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHCC---cccccccHhhEEECCCCcEEECCcccceecccccc---
Confidence 999999997643 36899999999999999999999998 99999999999999999999999999876532110
Q ss_pred cccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHhhcccchhhccCCCCCC
Q 005227 535 VPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSY 613 (707)
Q Consensus 535 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 613 (707)
.......++..|+|||.+.+..++.++||||||+++|||++ |+.||........ .... ........
T Consensus 156 ---~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~-~~~~---------~~~~~~~~ 222 (256)
T cd05059 156 ---TSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEV-VESV---------SAGYRLYR 222 (256)
T ss_pred ---cccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHH-HHHH---------HcCCcCCC
Confidence 01111223467999999999999999999999999999999 8888865433211 1111 11111223
Q ss_pred ChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 005227 614 PSECVEKFIKLALKCCQDETDARPSMSEVMREL 646 (707)
Q Consensus 614 ~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L 646 (707)
+..++..+.+++.+||+.+|++||++.++++.|
T Consensus 223 ~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 223 PKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred CCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence 445677899999999999999999999998875
No 155
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=3.7e-38 Score=334.98 Aligned_cols=237 Identities=25% Similarity=0.344 Sum_probs=186.3
Q ss_pred ceEeeeCceEEEEEEeC-CCcEEEEEEeccCCh---hhHHHHHHHHH-HHHccCCCcceeEEEEEEeCCeEEEEEecCCC
Q 005227 381 TQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQ-FLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSN 455 (707)
Q Consensus 381 ~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~---~~~~~~~~E~~-~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~ 455 (707)
+.||+|+||.||+|... +++.||+|++..... .....+..|.. +++.++||||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG 80 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999975 689999999865322 22334555554 67889999999999999999999999999999
Q ss_pred CCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCCCcc
Q 005227 456 GTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIV 535 (707)
Q Consensus 456 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 535 (707)
|+|.+.+... ..+++..+..++.||++||+|||+.+ |+||||||+||+++.++.+||+|||+++.....
T Consensus 81 ~~L~~~l~~~--~~~~~~~~~~~~~qi~~~L~~lH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~------ 149 (321)
T cd05603 81 GELFFHLQRE--RCFLEPRARFYAAEVASAIGYLHSLN---IIYRDLKPENILLDSQGHVVLTDFGLCKEGVEP------ 149 (321)
T ss_pred CCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeEECCCCCEEEccCCCCccCCCC------
Confidence 9999888653 35888899999999999999999998 999999999999999999999999998753221
Q ss_pred ccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCCCCCCCh
Q 005227 536 PAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPS 615 (707)
Q Consensus 536 ~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 615 (707)
........||+.|+|||++.+..++.++|||||||++|||++|+.||..... ....... . ......+.
T Consensus 150 -~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~-~~~~~~i---------~-~~~~~~~~ 217 (321)
T cd05603 150 -EETTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDV-SQMYDNI---------L-HKPLQLPG 217 (321)
T ss_pred -CCccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCH-HHHHHHH---------h-cCCCCCCC
Confidence 1122345689999999999999999999999999999999999999975432 1111111 1 11122334
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCHH
Q 005227 616 ECVEKFIKLALKCCQDETDARPSMS 640 (707)
Q Consensus 616 ~~~~~l~~l~~~c~~~~p~~RPt~~ 640 (707)
.....+.+++.+|++.+|.+|++..
T Consensus 218 ~~~~~~~~li~~~l~~~p~~R~~~~ 242 (321)
T cd05603 218 GKTVAACDLLVGLLHKDQRRRLGAK 242 (321)
T ss_pred CCCHHHHHHHHHHccCCHhhcCCCC
Confidence 4455677777778888887777653
No 156
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=1e-37 Score=326.62 Aligned_cols=282 Identities=23% Similarity=0.353 Sum_probs=206.4
Q ss_pred cCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCChh-hHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEec
Q 005227 375 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ-GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 452 (707)
Q Consensus 375 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~-~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~ 452 (707)
++|+..+.||+|++|+||+|..+ +++.||||.+...... ....+.+|++++++++|+||+++++++.+.+..++||||
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEY 84 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEec
Confidence 57889999999999999999975 7899999998653322 234577899999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCC
Q 005227 453 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 532 (707)
Q Consensus 453 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 532 (707)
++ ++|.+++.... ..+++..++.++.|+++||.|||+.+ |+||||||+||++++++.+||+|||+++......
T Consensus 85 ~~-~~L~~~~~~~~-~~~~~~~~~~~~~ql~~al~~lH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~-- 157 (291)
T cd07844 85 LD-TDLKQYMDDCG-GGLSMHNVRLFLFQLLRGLAYCHQRR---VLHRDLKPQNLLISERGELKLADFGLARAKSVPS-- 157 (291)
T ss_pred CC-CCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCC---eecccCCHHHEEEcCCCCEEECccccccccCCCC--
Confidence 97 59999887643 36899999999999999999999998 9999999999999999999999999987543211
Q ss_pred CccccceecccccCCCccchhhhcc-CCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCCCC
Q 005227 533 GIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 611 (707)
Q Consensus 533 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 611 (707)
.......++..|+|||++.+ ..++.++||||+||++|||++|+.||.......+.+...+.. ..
T Consensus 158 -----~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~----------~~ 222 (291)
T cd07844 158 -----KTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRV----------LG 222 (291)
T ss_pred -----ccccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHh----------cC
Confidence 11122346788999999876 568899999999999999999999996554333322221111 00
Q ss_pred CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCC--CCCCccccCCCCCCCCCCCCCCcCCCCCCC
Q 005227 612 SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESD--TKTPEFINSEHTSKEETPPSSSSMLKHPYV 687 (707)
Q Consensus 612 ~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~--~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f 687 (707)
....+...........+....+...+ ..+ ....+... ....+++.+||..+|++|||++|+|+||||
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-------~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~~~f 291 (291)
T cd07844 223 TPTEETWPGVSSNPEFKPYSFPFYPP--RPL-------INHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKHPYF 291 (291)
T ss_pred CCChhhhhhhhhccccccccccccCC--hhH-------HHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence 11111111111110000000000000 111 11112222 455689999999999999999999999998
No 157
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=1.5e-37 Score=324.09 Aligned_cols=256 Identities=28% Similarity=0.488 Sum_probs=206.2
Q ss_pred cCCCccceEeeeCceEEEEEEe-----CCCcEEEEEEeccCC-hhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEE
Q 005227 375 NNFNSSTQIGQGGYGKVYKGIL-----PDGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 448 (707)
Q Consensus 375 ~~~~~~~~lG~G~fg~Vy~~~~-----~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~l 448 (707)
++|+..+.||+|+||+||+|.. .+++.||+|.+.... ......+.+|++++++++||||+++++++...+..++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 84 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCM 84 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEE
Confidence 4577889999999999999984 246789999987533 2334678899999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhcC---------------CCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCC
Q 005227 449 VYEFMSNGTLRDQLSAKS---------------KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKF 513 (707)
Q Consensus 449 V~E~~~~gsL~~~l~~~~---------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~ 513 (707)
||||+++++|.+++.... ...+++.....++.|++.||+|||+++ |+||||||+|||+++++
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~---i~H~dlkp~nili~~~~ 161 (283)
T cd05090 85 LFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHF---FVHKDLAARNILIGEQL 161 (283)
T ss_pred EEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcC---eehhccccceEEEcCCC
Confidence 999999999999986432 234788999999999999999999998 99999999999999999
Q ss_pred cEEEeeecccccCCCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc-CCCCCCCCchhHHH
Q 005227 514 TAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVRE 592 (707)
Q Consensus 514 ~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~ellt-G~~pf~~~~~~~~~ 592 (707)
.+||+|||+++....... ........++..|+|||++.+..++.++|||||||++|||++ |..||..... ...
T Consensus 162 ~~kl~dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~-~~~ 235 (283)
T cd05090 162 HVKISDLGLSREIYSADY-----YRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSN-QEV 235 (283)
T ss_pred cEEeccccccccccCCcc-----eecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCH-HHH
Confidence 999999999976543221 111223345678999999998889999999999999999999 9889864332 111
Q ss_pred HHHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 005227 593 VNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELES 648 (707)
Q Consensus 593 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~ 648 (707)
.... ........+..++..+.+++.+|++.+|++||++.++.+.+..
T Consensus 236 ~~~~---------~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 236 IEMV---------RKRQLLPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred HHHH---------HcCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence 1111 1112223445567789999999999999999999999988764
No 158
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=7.5e-38 Score=326.45 Aligned_cols=279 Identities=27% Similarity=0.395 Sum_probs=204.9
Q ss_pred CCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCCh--hhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEec
Q 005227 376 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 452 (707)
Q Consensus 376 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~ 452 (707)
+|+..+.||+|++|.||+|..+ +++.||+|++..... ...+.+.+|+.+++.++||||+++++++.+++..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEF 80 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEec
Confidence 4778899999999999999975 789999999864322 2245788999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcC-CCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCC
Q 005227 453 MSNGTLRDQLSAKS-KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 531 (707)
Q Consensus 453 ~~~gsL~~~l~~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 531 (707)
++ ++|.+++.... ...+++..++.++.|+++||+|||+.+ |+|+||||+||++++++.+||+|||++.......
T Consensus 81 ~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~- 155 (285)
T cd07861 81 LS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRR---VLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPV- 155 (285)
T ss_pred CC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCC---eeecCCCHHHEEEcCCCcEEECcccceeecCCCc-
Confidence 96 68988886533 356899999999999999999999998 9999999999999999999999999987543211
Q ss_pred CCccccceecccccCCCccchhhhcc-CCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCCC
Q 005227 532 EGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 610 (707)
Q Consensus 532 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 610 (707)
.......+++.|+|||++.+ ..++.++|||||||++|||++|+.||............ ... .
T Consensus 156 ------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~-~~~------~---- 218 (285)
T cd07861 156 ------RVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRI-FRI------L---- 218 (285)
T ss_pred ------ccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH-HHH------h----
Confidence 11223356889999999876 45788999999999999999999999754432221111 000 0
Q ss_pred CCCChHHHHHHHHHHHHhcccCCC-CCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCCCCCCC
Q 005227 611 GSYPSECVEKFIKLALKCCQDETD-ARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYV 687 (707)
Q Consensus 611 ~~~~~~~~~~l~~l~~~c~~~~p~-~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f 687 (707)
.............+... -...+. .... +.......+....++|.+||..||++|||+++++.||||
T Consensus 219 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~----------~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~~~~ 285 (285)
T cd07861 219 GTPTEDVWPGVTSLPDY-KNTFPKWKKGS----------LRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNHPYF 285 (285)
T ss_pred CCCChhhhhcchhhHHH-HhhccccCcch----------hHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcCCCC
Confidence 00011111100000000 000000 0000 011122334555689999999999999999999999998
No 159
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=1.5e-37 Score=329.65 Aligned_cols=258 Identities=26% Similarity=0.442 Sum_probs=206.4
Q ss_pred hcCCCccceEeeeCceEEEEEEeC-CCc----EEEEEEeccCC-hhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEE
Q 005227 374 TNNFNSSTQIGQGGYGKVYKGILP-DGT----VVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQM 447 (707)
Q Consensus 374 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~----~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~ 447 (707)
..+|+..+.||+|+||+||+|.+. +++ .||+|.+.... ....+++.+|+.+++.++||||++++++|... ..+
T Consensus 6 ~~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~ 84 (316)
T cd05108 6 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQ 84 (316)
T ss_pred hhhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Cce
Confidence 356889999999999999999863 343 48999987543 33456789999999999999999999999764 577
Q ss_pred EEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCC
Q 005227 448 LVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAP 527 (707)
Q Consensus 448 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~ 527 (707)
+|+||+++|+|.+++.... ..+++..++.++.||+.||+|||+.+ |+||||||+|||+++++.+||+|||+++...
T Consensus 85 ~v~e~~~~g~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~---iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~ 160 (316)
T cd05108 85 LITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEERR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLG 160 (316)
T ss_pred eeeecCCCCCHHHHHHhcc-ccCCHHHHHHHHHHHHHHHHHHHhcC---eeccccchhheEecCCCcEEEcccccccccc
Confidence 9999999999999997643 35889999999999999999999998 9999999999999999999999999998764
Q ss_pred CCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHhhcccchhhc
Q 005227 528 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVI 606 (707)
Q Consensus 528 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~ 606 (707)
.... ........++..|+|||++.+..++.++|||||||++|||++ |+.||...... +. .....
T Consensus 161 ~~~~-----~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~-~~-~~~~~-------- 225 (316)
T cd05108 161 ADEK-----EYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS-EI-SSILE-------- 225 (316)
T ss_pred CCCc-----ceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHH-HH-HHHHh--------
Confidence 3221 111122234678999999999999999999999999999998 99998653321 11 11111
Q ss_pred cCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 005227 607 DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 651 (707)
Q Consensus 607 ~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~ 651 (707)
.+.....+..+...+.+++..||+.+|.+||++.+++..+..+..
T Consensus 226 ~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~ 270 (316)
T cd05108 226 KGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 270 (316)
T ss_pred CCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHc
Confidence 111222344556778999999999999999999999999887754
No 160
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=2.3e-37 Score=317.25 Aligned_cols=249 Identities=26% Similarity=0.440 Sum_probs=201.7
Q ss_pred CCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccC--ChhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEec
Q 005227 376 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEG--SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 452 (707)
Q Consensus 376 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~ 452 (707)
+|+..+.||+|++|.||+|..+ +++.|++|.+... .....+.+.+|+++++.++||||+++++++...+..++||||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEY 80 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEe
Confidence 4778899999999999999975 7899999988643 233456789999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCC
Q 005227 453 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 532 (707)
Q Consensus 453 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 532 (707)
+++++|.+++.......+++..++.++.|++.||.|||+.+ ++|+||||+||++++++.++|+|||+++......
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~---i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~-- 155 (256)
T cd08529 81 AENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKK---ILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNT-- 155 (256)
T ss_pred CCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcceEEEeCCCCEEEcccccceeccCcc--
Confidence 99999999998765567999999999999999999999988 9999999999999999999999999988654321
Q ss_pred CccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCCCCC
Q 005227 533 GIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGS 612 (707)
Q Consensus 533 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 612 (707)
.......|+..|+|||+..+..++.++|||||||++|||++|+.||...... .... ....+....
T Consensus 156 -----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-~~~~---------~~~~~~~~~ 220 (256)
T cd08529 156 -----NFANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQG-ALIL---------KIIRGVFPP 220 (256)
T ss_pred -----chhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHH-HHHH---------HHHcCCCCC
Confidence 1122345788999999999999999999999999999999999999754421 1111 111222233
Q ss_pred CChHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005227 613 YPSECVEKFIKLALKCCQDETDARPSMSEVMR 644 (707)
Q Consensus 613 ~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~ 644 (707)
.+..+...+.+++.+||+.+|++||++.++++
T Consensus 221 ~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~ 252 (256)
T cd08529 221 VSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLR 252 (256)
T ss_pred CccccCHHHHHHHHHHccCCcccCcCHHHHhh
Confidence 34445566777777777777777777766654
No 161
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=4.6e-37 Score=317.32 Aligned_cols=257 Identities=24% Similarity=0.357 Sum_probs=209.6
Q ss_pred cCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCC---hhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEE
Q 005227 375 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 450 (707)
Q Consensus 375 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~ 450 (707)
++|++.+.||+|+||.||+|... +++.||||.+.... ......+.+|+++++.++||||+++++++...+..++||
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL 81 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence 57889999999999999999964 78999999875422 233457889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhc--CCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCC
Q 005227 451 EFMSNGTLRDQLSAK--SKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 528 (707)
Q Consensus 451 E~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~ 528 (707)
||+++++|.+++... ....+++..++.++.|+++||+|||+.+ ++|+||||+||+++.++.++|+|||++.....
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~ 158 (267)
T cd08228 82 ELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRR---VMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCC---eeCCCCCHHHEEEcCCCCEEECccccceeccc
Confidence 999999999988642 2345889999999999999999999998 99999999999999999999999999886542
Q ss_pred CCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccC
Q 005227 529 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDG 608 (707)
Q Consensus 529 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 608 (707)
.. .......|+..|+|||.+.+..++.++||||||+++|||++|+.||.............. ...
T Consensus 159 ~~-------~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~~--------~~~ 223 (267)
T cd08228 159 KT-------TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKI--------EQC 223 (267)
T ss_pred hh-------HHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHHHHHHHH--------hcC
Confidence 21 111234578899999999998899999999999999999999999865432111111111 111
Q ss_pred CCCC-CChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 005227 609 NMGS-YPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 649 (707)
Q Consensus 609 ~~~~-~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~ 649 (707)
.... .+...+..+.+++.+||+.+|++||++.++++.++++
T Consensus 224 ~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~ 265 (267)
T cd08228 224 DYPPLPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQM 265 (267)
T ss_pred CCCCCChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHh
Confidence 1122 2345668899999999999999999999999998875
No 162
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=1.6e-37 Score=319.63 Aligned_cols=257 Identities=30% Similarity=0.491 Sum_probs=211.8
Q ss_pred HHhcCCCccceEeeeCceEEEEEEeCCCcEEEEEEeccCChhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEe
Q 005227 372 LATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 451 (707)
Q Consensus 372 ~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E 451 (707)
...++|++.+.||+|+||+||+|..++++.||||.+.... ...+++.+|+.++++++|+||+++++++......++|||
T Consensus 3 ~~~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 81 (261)
T cd05034 3 IPRESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGT-MSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTE 81 (261)
T ss_pred cchhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCc-cCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEe
Confidence 3457899999999999999999998888899999987543 345679999999999999999999999998899999999
Q ss_pred cCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCC
Q 005227 452 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 531 (707)
Q Consensus 452 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 531 (707)
|+++++|.+++.......+++..+..++.|++.||+|||+.+ ++|+||||+||++++++.+|++|||+++.......
T Consensus 82 ~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~---i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~ 158 (261)
T cd05034 82 YMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRN---YIHRDLAARNILVGENLVCKIADFGLARLIEDDEY 158 (261)
T ss_pred ccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCcchheEEEcCCCCEEECccccceeccchhh
Confidence 999999999998766567999999999999999999999998 99999999999999999999999999876543110
Q ss_pred CCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHhhcccchhhccCCC
Q 005227 532 EGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 610 (707)
Q Consensus 532 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 610 (707)
.......++..|+|||.+.+..++.++|||||||++||+++ |+.||...... ...... .....
T Consensus 159 ------~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~-~~~~~~---------~~~~~ 222 (261)
T cd05034 159 ------TAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNR-EVLEQV---------ERGYR 222 (261)
T ss_pred ------hhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHH-HHHHHH---------HcCCC
Confidence 11112234568999999999999999999999999999999 99998654321 111111 11111
Q ss_pred CCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 005227 611 GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELES 648 (707)
Q Consensus 611 ~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~ 648 (707)
...+...+..+.+++.+|++.+|++||++.++.+.|+.
T Consensus 223 ~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 223 MPRPPNCPEELYDLMLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred CCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence 22334456789999999999999999999999988874
No 163
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=4.1e-38 Score=328.38 Aligned_cols=280 Identities=24% Similarity=0.394 Sum_probs=207.0
Q ss_pred CCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCChh--hHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEec
Q 005227 376 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ--GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 452 (707)
Q Consensus 376 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~--~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~ 452 (707)
+|+..+.||+|+||.||+|... +|+.||+|++...... ....+.+|++++++++|+||+++++++.+.+..++|+||
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEY 80 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEec
Confidence 5788899999999999999975 7899999998653222 235678899999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCC
Q 005227 453 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 532 (707)
Q Consensus 453 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 532 (707)
++ ++|.+++... ...+++..++.++.||++||.|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 81 ~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~al~~LH~~~---i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~-- 153 (284)
T cd07839 81 CD-QDLKKYFDSC-NGDIDPEIVKSFMFQLLKGLAFCHSHN---VLHRDLKPQNLLINKNGELKLADFGLARAFGIPV-- 153 (284)
T ss_pred CC-CCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEEcCCCcEEECccchhhccCCCC--
Confidence 96 5888887653 245899999999999999999999998 9999999999999999999999999997653221
Q ss_pred CccccceecccccCCCccchhhhccC-CCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCCCC
Q 005227 533 GIVPAHVSTVVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 611 (707)
Q Consensus 533 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 611 (707)
.......++..|+|||++.+. .++.++|||||||++|||++|..|+....+........... ..
T Consensus 154 -----~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~----------~~ 218 (284)
T cd07839 154 -----RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRL----------LG 218 (284)
T ss_pred -----CCcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHH----------hC
Confidence 112234568899999998774 47899999999999999999999976555433332221110 00
Q ss_pred CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCCCCCCC
Q 005227 612 SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYV 687 (707)
Q Consensus 612 ~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f 687 (707)
..+......+.++... ...+...... ......+.......+|+.+||..||++|||++|+|+||||
T Consensus 219 ~~~~~~~~~~~~~~~~------~~~~~~~~~~----~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h~~f 284 (284)
T cd07839 219 TPTEESWPGVSKLPDY------KPYPMYPATT----SLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQHPYF 284 (284)
T ss_pred CCChHHhHHhhhcccc------cccCCCCCcc----hhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcCCCC
Confidence 1111111111111000 0001110000 0111223445566789999999999999999999999998
No 164
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=2.8e-37 Score=317.86 Aligned_cols=253 Identities=30% Similarity=0.460 Sum_probs=206.8
Q ss_pred cCCCccceEeeeCceEEEEEEeCCCcEEEEEEeccCChhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEecCC
Q 005227 375 NNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMS 454 (707)
Q Consensus 375 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~ 454 (707)
++|.+.+.||+|+||.||+|..+++..||+|.+.... ...+.+.+|++++++++|+|++++++++. .+..++||||++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~ 83 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGT-MMPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVTEFMG 83 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCC-ccHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEEEcCC
Confidence 5688899999999999999998777789999886533 23467889999999999999999999875 456889999999
Q ss_pred CCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCCCc
Q 005227 455 NGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGI 534 (707)
Q Consensus 455 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 534 (707)
+++|.++++......+++..+..++.|++.||+|||+.+ ++|+||||+||++++++.++|+|||+++.......
T Consensus 84 ~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~---i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~--- 157 (260)
T cd05069 84 KGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMN---YIHRDLRAANILVGDNLVCKIADFGLARLIEDNEY--- 157 (260)
T ss_pred CCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---EeecccCcceEEEcCCCeEEECCCccceEccCCcc---
Confidence 999999997765556899999999999999999999998 99999999999999999999999999976543221
Q ss_pred cccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHhhcccchhhccCCCCCC
Q 005227 535 VPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSY 613 (707)
Q Consensus 535 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 613 (707)
.......++..|+|||+..+..++.++|||||||++|||++ |+.||........ .... ........
T Consensus 158 ---~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~-~~~~---------~~~~~~~~ 224 (260)
T cd05069 158 ---TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREV-LEQV---------ERGYRMPC 224 (260)
T ss_pred ---cccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHH-HHHH---------HcCCCCCC
Confidence 11112345678999999999999999999999999999999 8889865443211 1111 11111233
Q ss_pred ChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 005227 614 PSECVEKFIKLALKCCQDETDARPSMSEVMRELES 648 (707)
Q Consensus 614 ~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~ 648 (707)
+...+..+.+++.+||+.+|++||++.++.+.|+.
T Consensus 225 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 225 PQGCPESLHELMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred CcccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 45667889999999999999999999999998874
No 165
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=1.1e-37 Score=333.25 Aligned_cols=262 Identities=27% Similarity=0.459 Sum_probs=207.0
Q ss_pred HhcCCCccceEeeeCceEEEEEEeC------CCcEEEEEEeccCCh-hhHHHHHHHHHHHHcc-CCCcceeEEEEEEeC-
Q 005227 373 ATNNFNSSTQIGQGGYGKVYKGILP------DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEE- 443 (707)
Q Consensus 373 ~~~~~~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~- 443 (707)
..++|++.+.||+|+||.||+|... +++.||+|++..... ...+.+.+|+.+++++ +|+||++++++|...
T Consensus 5 ~~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~ 84 (337)
T cd05054 5 PRDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPG 84 (337)
T ss_pred CHHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCC
Confidence 3467899999999999999999742 357899999875432 2345688899999999 899999999988654
Q ss_pred CeEEEEEecCCCCCHHHHHhhcC---------------------------------------------------------
Q 005227 444 GEQMLVYEFMSNGTLRDQLSAKS--------------------------------------------------------- 466 (707)
Q Consensus 444 ~~~~lV~E~~~~gsL~~~l~~~~--------------------------------------------------------- 466 (707)
...++||||+++++|.+++....
T Consensus 85 ~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (337)
T cd05054 85 GPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDE 164 (337)
T ss_pred CCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhH
Confidence 56889999999999999986422
Q ss_pred --CCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCCCccccceecccc
Q 005227 467 --KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVK 544 (707)
Q Consensus 467 --~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~ 544 (707)
...+++..+..++.||+.||+|||+.+ |+||||||+|||+++++.+||+|||+++....... ........
T Consensus 165 ~~~~~l~~~~~~~~~~qi~~aL~~lH~~~---ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~-----~~~~~~~~ 236 (337)
T cd05054 165 LYKEPLTLEDLISYSFQVARGMEFLASRK---CIHRDLAARNILLSENNVVKICDFGLARDIYKDPD-----YVRKGDAR 236 (337)
T ss_pred HhhcCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCcceEEEeCCCcEEEeccccchhcccCcc-----hhhccCCC
Confidence 126899999999999999999999998 99999999999999999999999999986532210 01122334
Q ss_pred cCCCccchhhhccCCCCCchhhHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHhhcccchhhccCCCCCCChHHHHHHHH
Q 005227 545 GTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIK 623 (707)
Q Consensus 545 gt~~y~aPE~~~~~~~s~~sDVwSlGvll~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 623 (707)
++..|+|||++.+..++.++|||||||++|||++ |..||........ ...... .+.....+.....++.+
T Consensus 237 ~~~~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~-~~~~~~--------~~~~~~~~~~~~~~~~~ 307 (337)
T cd05054 237 LPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEE-FCRRLK--------EGTRMRAPEYATPEIYS 307 (337)
T ss_pred CCccccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHH-HHHHHh--------ccCCCCCCccCCHHHHH
Confidence 5678999999999999999999999999999998 9999864322111 111111 11112234455678999
Q ss_pred HHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 005227 624 LALKCCQDETDARPSMSEVMRELESIWN 651 (707)
Q Consensus 624 l~~~c~~~~p~~RPt~~~v~~~L~~~~~ 651 (707)
++.+||+.+|++||++.++++.|+.+..
T Consensus 308 l~~~cl~~~p~~RPs~~ell~~l~~~~~ 335 (337)
T cd05054 308 IMLDCWHNNPEDRPTFSELVEILGDLLQ 335 (337)
T ss_pred HHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 9999999999999999999999987654
No 166
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=1.4e-37 Score=347.86 Aligned_cols=257 Identities=22% Similarity=0.326 Sum_probs=208.8
Q ss_pred HHHhcCCCccceEeeeCceEEEEEEe-CCCcEEEEEEeccCC--hhhHHHHHHHHHHHHccCCCcceeEEEEEEeCC---
Q 005227 371 ALATNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG--- 444 (707)
Q Consensus 371 ~~~~~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~--- 444 (707)
....++|.+.+.||+|+||+||+|.. .+++.||||++.... ......+.+|+.++..++|+||+++++.+...+
T Consensus 28 ~~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~ 107 (496)
T PTZ00283 28 KEQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRN 107 (496)
T ss_pred cccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccC
Confidence 34457999999999999999999985 479999999986543 233456889999999999999999988775432
Q ss_pred -----eEEEEEecCCCCCHHHHHhhc--CCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEE
Q 005227 445 -----EQMLVYEFMSNGTLRDQLSAK--SKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKV 517 (707)
Q Consensus 445 -----~~~lV~E~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl 517 (707)
..++||||+++|+|.++++.. ....+++..+..++.|++.||.|||+.+ |+||||||+|||+++++.+||
T Consensus 108 ~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~---IiHrDLKP~NILl~~~~~vkL 184 (496)
T PTZ00283 108 PENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKH---MIHRDIKSANILLCSNGLVKL 184 (496)
T ss_pred cccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEeCCCCEEE
Confidence 368999999999999999753 2346899999999999999999999998 999999999999999999999
Q ss_pred eeecccccCCCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHh
Q 005227 518 ADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAY 597 (707)
Q Consensus 518 ~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~ 597 (707)
+|||+++....... ........||+.|+|||++.+..++.++|||||||++|||++|+.||..... ...+.
T Consensus 185 ~DFGls~~~~~~~~-----~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~-~~~~~--- 255 (496)
T PTZ00283 185 GDFGFSKMYAATVS-----DDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENM-EEVMH--- 255 (496)
T ss_pred EecccCeecccccc-----ccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCH-HHHHH---
Confidence 99999986543211 1122345789999999999999999999999999999999999999965432 22111
Q ss_pred hcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005227 598 QSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRE 645 (707)
Q Consensus 598 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~ 645 (707)
....+.....+..++.++.+++..||+.+|.+||++.++++.
T Consensus 256 ------~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~ 297 (496)
T PTZ00283 256 ------KTLAGRYDPLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNM 297 (496)
T ss_pred ------HHhcCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence 112223334556677889999999999999999999998753
No 167
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=4.6e-38 Score=335.55 Aligned_cols=203 Identities=27% Similarity=0.318 Sum_probs=174.0
Q ss_pred cCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCC---hhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEE
Q 005227 375 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 450 (707)
Q Consensus 375 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~ 450 (707)
++|++.+.||+|+||+||+++.. +++.||+|++.... ......+.+|..++..++|+||+++++++.+.+..++||
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~ 80 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM 80 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 47899999999999999999965 68899999986522 122345788999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCC
Q 005227 451 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 530 (707)
Q Consensus 451 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~ 530 (707)
||+++|+|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 81 Ey~~gg~L~~~l~~~~-~~l~~~~~~~~~~qi~~~L~~lH~~~---iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 156 (331)
T cd05624 81 DYYVGGDLLTLLSKFE-DRLPEDMARFYIAEMVLAIHSIHQLH---YVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDG 156 (331)
T ss_pred eCCCCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCchHHEEEcCCCCEEEEeccceeeccCCC
Confidence 9999999999997632 35889999999999999999999998 9999999999999999999999999997654321
Q ss_pred CCCccccceecccccCCCccchhhhcc-----CCCCCchhhHHHHHHHHHHHcCCCCCCCCc
Q 005227 531 IEGIVPAHVSTVVKGTPGYLDPEYFLT-----HKLTDKSDVYSLGVVFLELLTGMQPISHGK 587 (707)
Q Consensus 531 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~s~~sDVwSlGvll~elltG~~pf~~~~ 587 (707)
........||+.|+|||++.+ ..++.++|||||||++|||++|+.||....
T Consensus 157 ------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~ 212 (331)
T cd05624 157 ------TVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAES 212 (331)
T ss_pred ------ceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCC
Confidence 111223568999999999876 567889999999999999999999996543
No 168
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5e-39 Score=327.19 Aligned_cols=205 Identities=26% Similarity=0.397 Sum_probs=184.2
Q ss_pred HHhcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCCh---hhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEE
Q 005227 372 LATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQM 447 (707)
Q Consensus 372 ~~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~ 447 (707)
...+.|+.-++||+|+||.||-++.+ +|+.+|.|.+.+... ..+...+.|-.+|+++..+.||.+--.|++.+..|
T Consensus 182 vt~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LC 261 (591)
T KOG0986|consen 182 VTKNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALC 261 (591)
T ss_pred ccccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceE
Confidence 34567888999999999999999965 799999998875433 34567889999999999999999999999999999
Q ss_pred EEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCC
Q 005227 448 LVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAP 527 (707)
Q Consensus 448 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~ 527 (707)
+|+..|.||+|.-+|...+...++++.++.+|.+|+.||++||+.. ||.||+||+|||+|+.|+++|+|.|+|..+.
T Consensus 262 lVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~---iVYRDLKPeNILLDd~GhvRISDLGLAvei~ 338 (591)
T KOG0986|consen 262 LVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRR---IVYRDLKPENILLDDHGHVRISDLGLAVEIP 338 (591)
T ss_pred EEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcc---eeeccCChhheeeccCCCeEeeccceEEecC
Confidence 9999999999999999888888999999999999999999999999 9999999999999999999999999998776
Q ss_pred CCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCc
Q 005227 528 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 587 (707)
Q Consensus 528 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~~ 587 (707)
..+ .....+||.+|||||++.+..|+...|.||+||++|||+.|+.||....
T Consensus 339 ~g~--------~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~K 390 (591)
T KOG0986|consen 339 EGK--------PIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRK 390 (591)
T ss_pred CCC--------ccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhh
Confidence 432 3344589999999999999999999999999999999999999996443
No 169
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=3.3e-37 Score=326.58 Aligned_cols=281 Identities=24% Similarity=0.440 Sum_probs=220.4
Q ss_pred HHhcCCCccceEeeeCceEEEEEEeC--------CCcEEEEEEeccCC-hhhHHHHHHHHHHHHcc-CCCcceeEEEEEE
Q 005227 372 LATNNFNSSTQIGQGGYGKVYKGILP--------DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRL-HHRNLVSLVGYCD 441 (707)
Q Consensus 372 ~~~~~~~~~~~lG~G~fg~Vy~~~~~--------~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~ 441 (707)
...++|.+.+.||+|+||.||+|... ....||+|.+.... ......+.+|+++++++ +||||+++++++.
T Consensus 9 ~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~ 88 (314)
T cd05099 9 FPRDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCT 88 (314)
T ss_pred ccHHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEc
Confidence 34467888999999999999999742 24579999987543 23346788999999999 6999999999999
Q ss_pred eCCeEEEEEecCCCCCHHHHHhhcC--------------CCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCE
Q 005227 442 EEGEQMLVYEFMSNGTLRDQLSAKS--------------KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNI 507 (707)
Q Consensus 442 ~~~~~~lV~E~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NI 507 (707)
..+..++||||+++|+|.+++.... ...+++..+..++.|++.||.|||+.+ |+||||||+||
T Consensus 89 ~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~g---i~H~dlkp~Ni 165 (314)
T cd05099 89 QEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRR---CIHRDLAARNV 165 (314)
T ss_pred cCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCC---eeeccccceeE
Confidence 9999999999999999999997532 235889999999999999999999998 99999999999
Q ss_pred EEcCCCcEEEeeecccccCCCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc-CCCCCCCC
Q 005227 508 LLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHG 586 (707)
Q Consensus 508 Ll~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~ellt-G~~pf~~~ 586 (707)
|+++++.+||+|||+++.....+.. .......++..|+|||++.+..++.++|||||||++|||++ |..||...
T Consensus 166 ll~~~~~~kL~Dfg~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~ 240 (314)
T cd05099 166 LVTEDNVMKIADFGLARGVHDIDYY-----KKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGI 240 (314)
T ss_pred EEcCCCcEEEccccccccccccccc-----cccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCC
Confidence 9999999999999999865432210 01112234567999999999999999999999999999999 88888543
Q ss_pred chhHHHHHHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccC
Q 005227 587 KNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINS 666 (707)
Q Consensus 587 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~ 666 (707)
.. .+..... ..+.....+..++..+.+++.+|++.+|++||++.++++.|+++.....+ ...++..+
T Consensus 241 ~~-~~~~~~~---------~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~~~~---~~~~~~~~ 307 (314)
T cd05099 241 PV-EELFKLL---------REGHRMDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVLAAVSE---EYLDLSMP 307 (314)
T ss_pred CH-HHHHHHH---------HcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHHhcC---CceeeEEe
Confidence 22 1111111 11122234556677889999999999999999999999999988765432 33466667
Q ss_pred CCCCCCC
Q 005227 667 EHTSKEE 673 (707)
Q Consensus 667 ~L~~dP~ 673 (707)
+.+++|+
T Consensus 308 ~~~~~~~ 314 (314)
T cd05099 308 FEQYSPS 314 (314)
T ss_pred hhhcCCC
Confidence 7777763
No 170
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=1.4e-37 Score=324.14 Aligned_cols=255 Identities=26% Similarity=0.424 Sum_probs=206.9
Q ss_pred CCCccceEeeeCceEEEEEEeC------CCcEEEEEEeccCChh-hHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEE
Q 005227 376 NFNSSTQIGQGGYGKVYKGILP------DGTVVAVKRAQEGSLQ-GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 448 (707)
Q Consensus 376 ~~~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~l~~~~~~-~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~l 448 (707)
+|.+.+.||+|+||+||+|... +++.||+|++...... ....+.+|+.+++.++||||+++++++...+..++
T Consensus 6 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~ 85 (283)
T cd05091 6 TVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLSM 85 (283)
T ss_pred HHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceEE
Confidence 4667889999999999999853 2578999999754332 24568899999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhc--------------CCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCc
Q 005227 449 VYEFMSNGTLRDQLSAK--------------SKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFT 514 (707)
Q Consensus 449 V~E~~~~gsL~~~l~~~--------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~ 514 (707)
++||+++++|.+++... ....+++..++.++.|++.||+|||+.+ |+||||||+||++++++.
T Consensus 86 ~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~g---i~H~dlkp~Nil~~~~~~ 162 (283)
T cd05091 86 IFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHH---VVHKDLATRNVLVFDKLN 162 (283)
T ss_pred EEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcC---ccccccchhheEecCCCc
Confidence 99999999999998532 1234788899999999999999999998 999999999999999999
Q ss_pred EEEeeecccccCCCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc-CCCCCCCCchhHHHH
Q 005227 515 AKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREV 593 (707)
Q Consensus 515 ~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~ellt-G~~pf~~~~~~~~~~ 593 (707)
+||+|||+++.....+. ........+++.|+|||.+.+..++.++|||||||++|||++ |..||..... .+..
T Consensus 163 ~kl~Dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~-~~~~ 236 (283)
T cd05091 163 VKISDLGLFREVYAADY-----YKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN-QDVI 236 (283)
T ss_pred eEecccccccccccchh-----eeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCH-HHHH
Confidence 99999999886543221 111223345778999999998899999999999999999998 8888864332 1221
Q ss_pred HHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 005227 594 NIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELES 648 (707)
Q Consensus 594 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~ 648 (707)
. .+..+.....+.+++..+.+++..||+.+|++||++.++++.|+.
T Consensus 237 ~---------~i~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 237 E---------MIRNRQVLPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred H---------HHHcCCcCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence 1 122233334566788889999999999999999999999998864
No 171
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=1.6e-37 Score=324.01 Aligned_cols=279 Identities=27% Similarity=0.398 Sum_probs=207.4
Q ss_pred CCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCCh--hhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEec
Q 005227 376 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 452 (707)
Q Consensus 376 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~ 452 (707)
+|+..+.||.|+||.||+|+.. +++.||||++..... ...+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF 80 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeec
Confidence 4788999999999999999965 789999998865332 2235788999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCC
Q 005227 453 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 532 (707)
Q Consensus 453 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 532 (707)
+. ++|.+++.......+++..++.++.|++.||+|||+.+ ++|+||+|+||++++++.+||+|||++.......
T Consensus 81 ~~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~---i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~-- 154 (284)
T cd07860 81 LH-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-- 154 (284)
T ss_pred cc-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEEeeccchhhcccCc--
Confidence 95 68999987766667999999999999999999999998 9999999999999999999999999987553221
Q ss_pred CccccceecccccCCCccchhhhccCC-CCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCCCC
Q 005227 533 GIVPAHVSTVVKGTPGYLDPEYFLTHK-LTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 611 (707)
Q Consensus 533 ~~~~~~~~~~~~gt~~y~aPE~~~~~~-~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 611 (707)
.......++..|+|||++.+.. ++.++|||||||++|||+||+.||......... ...... ..
T Consensus 155 -----~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~-~~~~~~----------~~ 218 (284)
T cd07860 155 -----RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQL-FRIFRT----------LG 218 (284)
T ss_pred -----cccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH-HHHHHH----------hC
Confidence 1122334678999999887644 688999999999999999999999754432211 111100 00
Q ss_pred CCChHHHHHHHHHHHHhcccCCC-CCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCCCCCCC
Q 005227 612 SYPSECVEKFIKLALKCCQDETD-ARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYV 687 (707)
Q Consensus 612 ~~~~~~~~~l~~l~~~c~~~~p~-~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f 687 (707)
..+......+..+...+. .-+. .+....++ .+..+....++|.+|+..||++|||++|+|+||||
T Consensus 219 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~----------~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~f 284 (284)
T cd07860 219 TPDEVVWPGVTSLPDYKP-SFPKWARQDFSKV----------VPPLDEDGRDLLSQMLHYDPNKRISAKAALAHPFF 284 (284)
T ss_pred CCChhhhhhhhHHHHHHh-hcccccccCHHHH----------cccCCHHHHHHHHHhcCCCcccCCCHHHHhcCCCC
Confidence 001111111111111111 1111 11111111 12233445689999999999999999999999998
No 172
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=1.9e-37 Score=324.92 Aligned_cols=264 Identities=27% Similarity=0.495 Sum_probs=212.1
Q ss_pred HHHHHhcCCCccceEeeeCceEEEEEEeC------CCcEEEEEEeccCC-hhhHHHHHHHHHHHHcc-CCCcceeEEEEE
Q 005227 369 EMALATNNFNSSTQIGQGGYGKVYKGILP------DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRL-HHRNLVSLVGYC 440 (707)
Q Consensus 369 ~l~~~~~~~~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~ 440 (707)
++....++|+..+.||+|+||.||+|... +...||+|.+.... .....++.+|+++++++ +|+||+++++++
T Consensus 6 ~~~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~ 85 (293)
T cd05053 6 EWELPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVC 85 (293)
T ss_pred ccccCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEE
Confidence 34555678899999999999999999863 23689999987532 23345688999999999 899999999999
Q ss_pred EeCCeEEEEEecCCCCCHHHHHhhc--------------CCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCC
Q 005227 441 DEEGEQMLVYEFMSNGTLRDQLSAK--------------SKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASN 506 (707)
Q Consensus 441 ~~~~~~~lV~E~~~~gsL~~~l~~~--------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~N 506 (707)
...+..++||||+++|+|.++++.. ....+++..++.++.|++.||+|||+.+ |+||||||+|
T Consensus 86 ~~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~---ivH~dlkp~N 162 (293)
T cd05053 86 TQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKK---CIHRDLAARN 162 (293)
T ss_pred cCCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCC---ccccccceee
Confidence 9999999999999999999999652 2346899999999999999999999988 9999999999
Q ss_pred EEEcCCCcEEEeeecccccCCCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc-CCCCCCC
Q 005227 507 ILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISH 585 (707)
Q Consensus 507 ILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~ellt-G~~pf~~ 585 (707)
|++++++.+||+|||+++........ .......++..|+|||++.+..++.++|||||||++|||++ |..||..
T Consensus 163 il~~~~~~~kL~Dfg~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~ 237 (293)
T cd05053 163 VLVTEDHVMKIADFGLARDIHHIDYY-----RKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPG 237 (293)
T ss_pred EEEcCCCeEEeCccccccccccccce-----eccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCC
Confidence 99999999999999999875432210 11112234678999999999999999999999999999998 9899864
Q ss_pred CchhHHHHHHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhh
Q 005227 586 GKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIW 650 (707)
Q Consensus 586 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~ 650 (707)
.... +.... ...+.....+..+...+.+++.+|++.+|++|||+.++++.|+.+.
T Consensus 238 ~~~~-~~~~~---------~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~ 292 (293)
T cd05053 238 IPVE-ELFKL---------LKEGYRMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML 292 (293)
T ss_pred CCHH-HHHHH---------HHcCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence 4321 11111 1112222344556778999999999999999999999999998753
No 173
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=5.7e-37 Score=319.70 Aligned_cols=265 Identities=28% Similarity=0.423 Sum_probs=205.1
Q ss_pred CC-CccceEeeeCceEEEEEEe-----CCCcEEEEEEeccCCh-hhHHHHHHHHHHHHccCCCcceeEEEEEEeC--CeE
Q 005227 376 NF-NSSTQIGQGGYGKVYKGIL-----PDGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE--GEQ 446 (707)
Q Consensus 376 ~~-~~~~~lG~G~fg~Vy~~~~-----~~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~--~~~ 446 (707)
+| +..+.||+|+||+||++.. .+++.||+|.+..... ...+.+.+|++++++++||||+++++++... ...
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (283)
T cd05080 4 RYLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGL 83 (283)
T ss_pred hhceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceE
Confidence 44 7889999999999988653 3678999999876432 3456788999999999999999999998654 468
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccC
Q 005227 447 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 526 (707)
Q Consensus 447 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~ 526 (707)
++||||+++++|.+++... .+++..++.++.|++.||+|||+.+ |+||||||+||++++++.+||+|||+++..
T Consensus 84 ~lv~e~~~~~~l~~~~~~~---~l~~~~~~~i~~~l~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~~l~dfg~~~~~ 157 (283)
T cd05080 84 QLIMEYVPLGSLRDYLPKH---KLNLAQLLLFAQQICEGMAYLHSQH---YIHRDLAARNVLLDNDRLVKIGDFGLAKAV 157 (283)
T ss_pred EEEecCCCCCCHHHHHHHc---CCCHHHHHHHHHHHHHHHHHHHHCC---eeccccChheEEEcCCCcEEEeeccccccc
Confidence 8999999999999999653 4899999999999999999999998 999999999999999999999999999865
Q ss_pred CCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHH-HHh---hcccc
Q 005227 527 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVN-IAY---QSSMM 602 (707)
Q Consensus 527 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~-~~~---~~~~~ 602 (707)
...... ........++..|+|||.+.+..++.++|||||||++|||++|+.|+........... ... .....
T Consensus 158 ~~~~~~----~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 233 (283)
T cd05080 158 PEGHEY----YRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRL 233 (283)
T ss_pred CCcchh----hccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhh
Confidence 432110 0111122356679999999988999999999999999999999999864332111000 000 00001
Q ss_pred hhhcc-CCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhh
Q 005227 603 FSVID-GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIW 650 (707)
Q Consensus 603 ~~~~~-~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~ 650 (707)
....+ ......+..++..+.+++..||+.+|++||++.++++.|+.+.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~ 282 (283)
T cd05080 234 IELLERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH 282 (283)
T ss_pred hhhhhcCCCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence 11111 1122345566788999999999999999999999999998764
No 174
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=5.7e-37 Score=319.12 Aligned_cols=259 Identities=26% Similarity=0.402 Sum_probs=204.8
Q ss_pred cCCCccceEeeeCceEEEEEEeC-CCc----EEEEEEeccCCh-hhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEE
Q 005227 375 NNFNSSTQIGQGGYGKVYKGILP-DGT----VVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 448 (707)
Q Consensus 375 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~----~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~l 448 (707)
++|++.+.||+|+||+||+|.+. +++ .|++|.+..... ....++..|+..+++++||||+++++++.. ...++
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~-~~~~~ 85 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPG-ASLQL 85 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEECC-CccEE
Confidence 46778899999999999999964 444 478888754332 223577888999999999999999998854 45788
Q ss_pred EEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCC
Q 005227 449 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 528 (707)
Q Consensus 449 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~ 528 (707)
|+||+++|+|.+++.... ..+++..++.++.||+.||+|||+.+ ++||||||+||++++++.+||+|||+++....
T Consensus 86 i~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~---iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~ 161 (279)
T cd05111 86 VTQLSPLGSLLDHVRQHR-DSLDPQRLLNWCVQIAKGMYYLEEHR---MVHRNLAARNILLKSDSIVQIADFGVADLLYP 161 (279)
T ss_pred EEEeCCCCcHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHCC---EeccccCcceEEEcCCCcEEEcCCccceeccC
Confidence 999999999999997643 35899999999999999999999998 99999999999999999999999999986543
Q ss_pred CCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHhhcccchhhcc
Q 005227 529 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVID 607 (707)
Q Consensus 529 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 607 (707)
.+. ........++..|+|||++.+..++.++|||||||++||+++ |+.||...... ....... .
T Consensus 162 ~~~-----~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~--~~~~~~~--------~ 226 (279)
T cd05111 162 DDK-----KYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPH--EVPDLLE--------K 226 (279)
T ss_pred CCc-----ccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHH--HHHHHHH--------C
Confidence 221 111233456788999999999999999999999999999998 99998654321 1111111 1
Q ss_pred CCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcC
Q 005227 608 GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMM 653 (707)
Q Consensus 608 ~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~ 653 (707)
+.....+..+...+.+++.+||..+|.+||++.++++.+..+.+..
T Consensus 227 ~~~~~~~~~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~~~ 272 (279)
T cd05111 227 GERLAQPQICTIDVYMVMVKCWMIDENVRPTFKELANEFTRMARDP 272 (279)
T ss_pred CCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHhCC
Confidence 1122233345567888999999999999999999999998876543
No 175
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=3e-37 Score=323.14 Aligned_cols=283 Identities=23% Similarity=0.373 Sum_probs=205.8
Q ss_pred HhcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCChhh-HHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEE
Q 005227 373 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQG-EKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 450 (707)
Q Consensus 373 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~-~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~ 450 (707)
++++|.+.+.||+|+||.||+|... +++.||+|++....... ...+.+|+.+++.++|+||+++++++...+..++||
T Consensus 3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~ 82 (291)
T cd07870 3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVF 82 (291)
T ss_pred ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEE
Confidence 3578999999999999999999964 78999999986543222 346788999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCC
Q 005227 451 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 530 (707)
Q Consensus 451 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~ 530 (707)
||+. +++.+++.... ..+.+..+..++.|++.||.|||+.+ |+|+||||+||+++.++.+||+|||+++......
T Consensus 83 e~~~-~~l~~~~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~ 157 (291)
T cd07870 83 EYMH-TDLAQYMIQHP-GGLHPYNVRLFMFQLLRGLAYIHGQH---ILHRDLKPQNLLISYLGELKLADFGLARAKSIPS 157 (291)
T ss_pred eccc-CCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChHHEEEcCCCcEEEeccccccccCCCC
Confidence 9995 68877775432 35788889999999999999999998 9999999999999999999999999987543221
Q ss_pred CCCccccceecccccCCCccchhhhcc-CCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCC
Q 005227 531 IEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGN 609 (707)
Q Consensus 531 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 609 (707)
.......++..|+|||++.+ ..++.++|||||||++|||++|+.||.......+.....+...
T Consensus 158 -------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~--------- 221 (291)
T cd07870 158 -------QTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVL--------- 221 (291)
T ss_pred -------CCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHc---------
Confidence 11123346889999999876 4578899999999999999999999976544333222211100
Q ss_pred CCCCChHHHHHHHHHH---HHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCCCCCC
Q 005227 610 MGSYPSECVEKFIKLA---LKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPY 686 (707)
Q Consensus 610 ~~~~~~~~~~~l~~l~---~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hp~ 686 (707)
+....+....+..+- ...+...+ ++. +..++.... ......+++.+|+..||++|||++|++.|||
T Consensus 222 -~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-------~~~~~~~~~-~~~~~~~ll~~~l~~dp~~R~t~~~~l~h~~ 290 (291)
T cd07870 222 -GVPTEDTWPGVSKLPNYKPEWFLPCK--PQQ-------LRVVWKRLS-RPPKAEDLASQMLMMFPKDRISAQDALLHPY 290 (291)
T ss_pred -CCCChhhhhhhhhcccccchhccccC--Ccc-------hhhhccccC-CChHHHHHHHHHhCcCcccCcCHHHHhcCCC
Confidence 000001000000000 00000000 111 111111111 2345568999999999999999999999999
Q ss_pred C
Q 005227 687 V 687 (707)
Q Consensus 687 f 687 (707)
|
T Consensus 291 ~ 291 (291)
T cd07870 291 F 291 (291)
T ss_pred C
Confidence 8
No 176
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=5.6e-37 Score=314.52 Aligned_cols=250 Identities=24% Similarity=0.382 Sum_probs=207.8
Q ss_pred CCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccC-ChhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEecC
Q 005227 376 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEG-SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 453 (707)
Q Consensus 376 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~ 453 (707)
+|++.+.||+|+||.||++... +++.||+|.+... .....+.+.+|+.+++.++|+||+++++++...+..++||||+
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYC 80 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeC
Confidence 4788999999999999999965 7899999988643 2334567889999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCCC
Q 005227 454 SNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEG 533 (707)
Q Consensus 454 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 533 (707)
++++|.+++.......+++..++.++.|++.||.|||+.+ |+|+||||+||++++++.++++|||.++......
T Consensus 81 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~---i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~--- 154 (255)
T cd08219 81 DGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKR---VLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPG--- 154 (255)
T ss_pred CCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCcceEEECCCCcEEEcccCcceeecccc---
Confidence 9999999987655566899999999999999999999998 9999999999999999999999999997654321
Q ss_pred ccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCCCCCC
Q 005227 534 IVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSY 613 (707)
Q Consensus 534 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 613 (707)
.......|+..|+|||++.+..++.++||||||+++|+|++|+.||...... .... .+..+.....
T Consensus 155 ----~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~-~~~~---------~~~~~~~~~~ 220 (255)
T cd08219 155 ----AYACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWK-NLIL---------KVCQGSYKPL 220 (255)
T ss_pred ----cccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHH-HHHH---------HHhcCCCCCC
Confidence 1122346888999999999989999999999999999999999999754321 1111 1112223334
Q ss_pred ChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005227 614 PSECVEKFIKLALKCCQDETDARPSMSEVMRE 645 (707)
Q Consensus 614 ~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~ 645 (707)
+...+..+.+++.+||+.+|++||++.+++..
T Consensus 221 ~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 221 PSHYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred CcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 55566788999999999999999999998753
No 177
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=3.7e-37 Score=320.70 Aligned_cols=255 Identities=28% Similarity=0.479 Sum_probs=207.7
Q ss_pred cCCCccceEeeeCceEEEEEEeC------CCcEEEEEEeccCChhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEE
Q 005227 375 NNFNSSTQIGQGGYGKVYKGILP------DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 448 (707)
Q Consensus 375 ~~~~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~l 448 (707)
.+|...++||+|+||.||++... ++..+|+|.+..........+.+|+++++.++|+||+++++++...+..++
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLM 84 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceEE
Confidence 45677899999999999999742 466899999887666666789999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhcCC-------------CCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcE
Q 005227 449 VYEFMSNGTLRDQLSAKSK-------------EPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTA 515 (707)
Q Consensus 449 V~E~~~~gsL~~~l~~~~~-------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ 515 (707)
||||+++++|.+++..... ..+++..++.++.|++.||+|||+.+ ++||||||+|||+++++.+
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~---i~H~dlkp~nil~~~~~~~ 161 (280)
T cd05092 85 VFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLH---FVHRDLATRNCLVGQGLVV 161 (280)
T ss_pred EEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCC---eecccccHhhEEEcCCCCE
Confidence 9999999999999976432 34889999999999999999999998 9999999999999999999
Q ss_pred EEeeecccccCCCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc-CCCCCCCCchhHHHHH
Q 005227 516 KVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVN 594 (707)
Q Consensus 516 kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~ellt-G~~pf~~~~~~~~~~~ 594 (707)
||+|||+++....... ........+++.|+|||.+.+..++.++|||||||++|||++ |+.||....... ...
T Consensus 162 kL~dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~-~~~ 235 (280)
T cd05092 162 KIGDFGMSRDIYSTDY-----YRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTE-AIE 235 (280)
T ss_pred EECCCCceeEcCCCce-----eecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHH-HHH
Confidence 9999999975532211 011122335678999999999999999999999999999998 899986543321 111
Q ss_pred HHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 005227 595 IAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELE 647 (707)
Q Consensus 595 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~ 647 (707)
....+.....+..++..+.+++.+||+.+|.+||++.++.+.|+
T Consensus 236 ---------~~~~~~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~ 279 (280)
T cd05092 236 ---------CITQGRELERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQ 279 (280)
T ss_pred ---------HHHcCccCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHh
Confidence 11122222334456678999999999999999999999998875
No 178
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=5.9e-37 Score=314.59 Aligned_cols=250 Identities=29% Similarity=0.475 Sum_probs=209.1
Q ss_pred hcCCCccceEeeeCceEEEEEEeCCCcEEEEEEeccCChhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEecC
Q 005227 374 TNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 453 (707)
Q Consensus 374 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~ 453 (707)
.++|+..+.||+|+||.||+|... ++.||+|.+..... ..+++.+|+.+++.++|+||+++++++...+..++||||+
T Consensus 5 ~~~~~~~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 82 (256)
T cd05039 5 SKELKLGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYM 82 (256)
T ss_pred hhhccceeeeecCCCceEEEEEec-CcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEec
Confidence 457888999999999999999974 78899999986544 4578999999999999999999999999899999999999
Q ss_pred CCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCCC
Q 005227 454 SNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEG 533 (707)
Q Consensus 454 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 533 (707)
++++|.+++.......+++..+..++.|++.||.|||+.+ ++|+||||+||++++++.+||+|||.++......
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~---i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~--- 156 (256)
T cd05039 83 AKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKN---FVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQ--- 156 (256)
T ss_pred CCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---ccchhcccceEEEeCCCCEEEccccccccccccc---
Confidence 9999999998766557999999999999999999999998 9999999999999999999999999998653211
Q ss_pred ccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHhhcccchhhccCCCCC
Q 005227 534 IVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGS 612 (707)
Q Consensus 534 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 612 (707)
.....+..|+|||++.+..++.++||||||+++||+++ |+.||...... + ...... ......
T Consensus 157 -------~~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~-~-~~~~~~--------~~~~~~ 219 (256)
T cd05039 157 -------DSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK-D-VVPHVE--------KGYRME 219 (256)
T ss_pred -------ccCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHH-H-HHHHHh--------cCCCCC
Confidence 12234568999999998899999999999999999997 99998654321 1 111111 111122
Q ss_pred CChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 005227 613 YPSECVEKFIKLALKCCQDETDARPSMSEVMRELES 648 (707)
Q Consensus 613 ~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~ 648 (707)
.+..++..+.+++.+|++.+|++||++.+++.+|+.
T Consensus 220 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 255 (256)
T cd05039 220 APEGCPPEVYKVMKDCWELDPAKRPTFKQLREQLAL 255 (256)
T ss_pred CccCCCHHHHHHHHHHhccChhhCcCHHHHHHHHhc
Confidence 344566889999999999999999999999999875
No 179
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=6.5e-37 Score=314.71 Aligned_cols=249 Identities=27% Similarity=0.449 Sum_probs=200.3
Q ss_pred eEeeeCceEEEEEEeC---CCcEEEEEEeccCChh-hHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEecCCCCC
Q 005227 382 QIGQGGYGKVYKGILP---DGTVVAVKRAQEGSLQ-GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGT 457 (707)
Q Consensus 382 ~lG~G~fg~Vy~~~~~---~~~~vavK~l~~~~~~-~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gs 457 (707)
.||+|+||.||+|.+. ++..||+|++...... ..+.+.+|+.++++++|+||+++++++. ....++||||+++++
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~~~~ 80 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMASGGP 80 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCCCCC
Confidence 3899999999999864 4567999998765332 3467899999999999999999999885 457899999999999
Q ss_pred HHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCCCcccc
Q 005227 458 LRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPA 537 (707)
Q Consensus 458 L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~ 537 (707)
|.+++... ...+++..++.++.|++.||+|||+++ ++||||||+||+++.++.+||+|||+++........ .
T Consensus 81 L~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~----~ 152 (257)
T cd05115 81 LNKFLSGK-KDEITVSNVVELMHQVSMGMKYLEGKN---FVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSY----Y 152 (257)
T ss_pred HHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhcC---eeecccchheEEEcCCCcEEeccCCccccccCCccc----e
Confidence 99998653 346899999999999999999999998 999999999999999999999999999765432210 0
Q ss_pred ceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHhhcccchhhccCCCCCCChH
Q 005227 538 HVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSE 616 (707)
Q Consensus 538 ~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 616 (707)
.......++..|+|||.+.+..++.++|||||||++||+++ |..||...... +... .+..+.....+..
T Consensus 153 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~-~~~~---------~~~~~~~~~~~~~ 222 (257)
T cd05115 153 KARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGP-EVMS---------FIEQGKRLDCPAE 222 (257)
T ss_pred eccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHH-HHHH---------HHHCCCCCCCCCC
Confidence 11112234578999999998889999999999999999996 99999754331 1111 1112223345566
Q ss_pred HHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 005227 617 CVEKFIKLALKCCQDETDARPSMSEVMRELESI 649 (707)
Q Consensus 617 ~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~ 649 (707)
++.++.+++.+||..+|++||++.++.+.|+.+
T Consensus 223 ~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 223 CPPEMYALMKDCWIYKWEDRPNFAKVEERMRTY 255 (257)
T ss_pred CCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence 778999999999999999999999999998865
No 180
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=3.9e-37 Score=321.90 Aligned_cols=260 Identities=27% Similarity=0.444 Sum_probs=207.9
Q ss_pred HHhcCCCccceEeeeCceEEEEEEeC------CCcEEEEEEeccCCh-hhHHHHHHHHHHHHccCCCcceeEEEEEEeCC
Q 005227 372 LATNNFNSSTQIGQGGYGKVYKGILP------DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG 444 (707)
Q Consensus 372 ~~~~~~~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~ 444 (707)
...++|++.+.||+|+||.||+|..+ .+..||+|.+..... .....+.+|+.+++.++|+||+++++++...+
T Consensus 3 ~~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~ 82 (288)
T cd05061 3 VSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQ 82 (288)
T ss_pred ccHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC
Confidence 45678999999999999999999753 245899998865432 23456889999999999999999999999999
Q ss_pred eEEEEEecCCCCCHHHHHhhcC--------CCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEE
Q 005227 445 EQMLVYEFMSNGTLRDQLSAKS--------KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAK 516 (707)
Q Consensus 445 ~~~lV~E~~~~gsL~~~l~~~~--------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~k 516 (707)
..++||||+++|+|.+++.... .....+..+..++.|++.||.|||+.+ |+||||||+||++++++.+|
T Consensus 83 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~H~dikp~nili~~~~~~~ 159 (288)
T cd05061 83 PTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHDFTVK 159 (288)
T ss_pred CcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---CcCCCCChheEEEcCCCcEE
Confidence 9999999999999999997532 234567888999999999999999998 99999999999999999999
Q ss_pred EeeecccccCCCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc-CCCCCCCCchhHHHHHH
Q 005227 517 VADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNI 595 (707)
Q Consensus 517 l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~ellt-G~~pf~~~~~~~~~~~~ 595 (707)
|+|||+++....... ........++..|+|||.+.+..++.++|||||||++|||++ |..||..... .+...
T Consensus 160 L~Dfg~~~~~~~~~~-----~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~-~~~~~- 232 (288)
T cd05061 160 IGDFGMTRDIYETDY-----YRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN-EQVLK- 232 (288)
T ss_pred ECcCCcccccccccc-----ccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCH-HHHHH-
Confidence 999999986533221 011112235678999999999999999999999999999999 7888864332 11111
Q ss_pred HhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 005227 596 AYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 649 (707)
Q Consensus 596 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~ 649 (707)
.+.++.....+..++..+.+++.+|++.+|++||++.++++.+++.
T Consensus 233 --------~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~ 278 (288)
T cd05061 233 --------FVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDD 278 (288)
T ss_pred --------HHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhh
Confidence 1122223334455668899999999999999999999999888754
No 181
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=1.1e-37 Score=325.22 Aligned_cols=279 Identities=24% Similarity=0.359 Sum_probs=207.8
Q ss_pred cCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCCh--hhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEe
Q 005227 375 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 451 (707)
Q Consensus 375 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E 451 (707)
++|+..+.||+|+||.||+|..+ +++.||+|++..... ...+.+.+|++++++++|+|++++++++......++|||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e 80 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFE 80 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEe
Confidence 46888999999999999999976 689999998865322 234568899999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCC
Q 005227 452 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 531 (707)
Q Consensus 452 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 531 (707)
|+++++|..++... ..+++..++.++.|++.||+|||+.+ ++|+||||+||++++++.+||+|||++........
T Consensus 81 ~~~~~~l~~~~~~~--~~~~~~~~~~~~~ql~~~l~~LH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~ 155 (286)
T cd07847 81 YCDHTVLNELEKNP--RGVPEHLIKKIIWQTLQAVNFCHKHN---CIHRDVKPENILITKQGQIKLCDFGFARILTGPGD 155 (286)
T ss_pred ccCccHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCChhhEEEcCCCcEEECccccceecCCCcc
Confidence 99998888876443 35899999999999999999999988 99999999999999999999999999987643221
Q ss_pred CCccccceecccccCCCccchhhhcc-CCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCCC
Q 005227 532 EGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 610 (707)
Q Consensus 532 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 610 (707)
......++..|+|||++.+ ..++.++|||||||++|||++|+.||................ ..+..
T Consensus 156 -------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~---~~~~~--- 222 (286)
T cd07847 156 -------DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTL---GDLIP--- 222 (286)
T ss_pred -------cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHh---CCCCh---
Confidence 1223457789999999876 567899999999999999999999997544322111110000 00000
Q ss_pred CCCChHHHHHHHH---HHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCCCCCCC
Q 005227 611 GSYPSECVEKFIK---LALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYV 687 (707)
Q Consensus 611 ~~~~~~~~~~l~~---l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f 687 (707)
. ...+.. .........+..+++... ..+..+....+|+.+|+..||++|||+.|++.||||
T Consensus 223 -----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~~~f 286 (286)
T cd07847 223 -----R-HQQIFSTNQFFKGLSIPEPETREPLES----------KFPNISSPALSFLKGCLQMDPTERLSCEELLEHPYF 286 (286)
T ss_pred -----H-HhhhcccccccccccCCCcccccCHHH----------HhccCCHHHHHHHHHHhcCCccccCCHHHHhcCCCC
Confidence 0 000000 000001112222222211 122335566789999999999999999999999998
No 182
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=2e-37 Score=322.57 Aligned_cols=260 Identities=24% Similarity=0.409 Sum_probs=203.1
Q ss_pred cCCCccceEeeeCceEEEEEEe-CCCcEEEEEEeccCC-hhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEec
Q 005227 375 NNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 452 (707)
Q Consensus 375 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~ 452 (707)
++|+..+.||+|+||.||+|.. .+++.||+|.+.... ....+.+.+|++++++++||||+++++++...+..++||||
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 80 (279)
T cd06619 1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEF 80 (279)
T ss_pred CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEec
Confidence 3677889999999999999996 478999999986542 33346789999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCC
Q 005227 453 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 532 (707)
Q Consensus 453 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 532 (707)
+++++|..+. .+++..+..++.|++.||+|||+.+ |+|+||||+||+++.++.+||+|||++......
T Consensus 81 ~~~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~--- 148 (279)
T cd06619 81 MDGGSLDVYR------KIPEHVLGRIAVAVVKGLTYLWSLK---ILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNS--- 148 (279)
T ss_pred CCCCChHHhh------cCCHHHHHHHHHHHHHHHHHHHHCC---EeeCCCCHHHEEECCCCCEEEeeCCcceecccc---
Confidence 9999996542 3678889999999999999999998 999999999999999999999999999755321
Q ss_pred CccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCCCCC
Q 005227 533 GIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGS 612 (707)
Q Consensus 533 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 612 (707)
......|+..|+|||++.+..++.++|||||||++|||++|+.||......... .
T Consensus 149 ------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~-------------------~ 203 (279)
T cd06619 149 ------IAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGS-------------------L 203 (279)
T ss_pred ------cccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccc-------------------c
Confidence 122346889999999999999999999999999999999999999642110000 0
Q ss_pred CChHHHHHHHHHHHHhc-ccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCCCCCCCCCCC
Q 005227 613 YPSECVEKFIKLALKCC-QDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSSDV 691 (707)
Q Consensus 613 ~~~~~~~~l~~l~~~c~-~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f~~~~ 691 (707)
.+ ... ..|+ ..++...| ....+....+|+.+|+..+|++||+++|+++||||....
T Consensus 204 ~~----~~~----~~~~~~~~~~~~~---------------~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~~~~~~~~ 260 (279)
T cd06619 204 MP----LQL----LQCIVDEDPPVLP---------------VGQFSEKFVHFITQCMRKQPKERPAPENLMDHPFIVQYN 260 (279)
T ss_pred ch----HHH----HHHHhccCCCCCC---------------CCcCCHHHHHHHHHHhhCChhhCCCHHHHhcCccccccc
Confidence 00 000 0111 11111100 011122345788899999999999999999999997765
Q ss_pred CCC
Q 005227 692 SGS 694 (707)
Q Consensus 692 ~~~ 694 (707)
.++
T Consensus 261 ~~~ 263 (279)
T cd06619 261 DGN 263 (279)
T ss_pred Ccc
Confidence 543
No 183
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=6.3e-37 Score=317.18 Aligned_cols=255 Identities=29% Similarity=0.461 Sum_probs=204.6
Q ss_pred CCccceEeeeCceEEEEEEeC-C---CcEEEEEEeccCCh--hhHHHHHHHHHHHHccCCCcceeEEEEEEeCCe-----
Q 005227 377 FNSSTQIGQGGYGKVYKGILP-D---GTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGE----- 445 (707)
Q Consensus 377 ~~~~~~lG~G~fg~Vy~~~~~-~---~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~----- 445 (707)
|++.+.||+|+||.||+|.+. + +..||+|+++.... .....+.+|++.++.++|+||+++++++.....
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 567889999999999999864 2 36799999875332 234578999999999999999999998865544
Q ss_pred -EEEEEecCCCCCHHHHHhhc----CCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeee
Q 005227 446 -QMLVYEFMSNGTLRDQLSAK----SKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADF 520 (707)
Q Consensus 446 -~~lV~E~~~~gsL~~~l~~~----~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DF 520 (707)
.++||||+++|+|..++... ....+++..+..++.|++.||+|||+.+ ++||||||+||++++++.+||+||
T Consensus 81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~df 157 (273)
T cd05035 81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRN---FIHRDLAARNCMLREDMTVCVADF 157 (273)
T ss_pred ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCC---eeccccchheEEECCCCeEEECCc
Confidence 79999999999999998553 2346899999999999999999999998 999999999999999999999999
Q ss_pred cccccCCCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHhhc
Q 005227 521 GLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQS 599 (707)
Q Consensus 521 Gla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~ellt-G~~pf~~~~~~~~~~~~~~~~ 599 (707)
|+++........ .......++..|+|||++.+..++.++|||||||++|||++ |..||...... +...
T Consensus 158 g~~~~~~~~~~~-----~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~-~~~~----- 226 (273)
T cd05035 158 GLSKKIYSGDYY-----RQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENH-EIYD----- 226 (273)
T ss_pred cceeeccccccc-----cccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHH-HHHH-----
Confidence 999865432211 01112234678999999998999999999999999999999 88888654331 1111
Q ss_pred ccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 005227 600 SMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 649 (707)
Q Consensus 600 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~ 649 (707)
.+..+.....+..++..+.+++.+||+.+|++||++.++++.|+++
T Consensus 227 ----~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 227 ----YLRHGNRLKQPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred ----HHHcCCCCCCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 1122223334566778899999999999999999999999998864
No 184
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=7.6e-37 Score=315.98 Aligned_cols=258 Identities=28% Similarity=0.482 Sum_probs=207.8
Q ss_pred hcCCCccceEeeeCceEEEEEEeC-CC---cEEEEEEeccCC-hhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEE
Q 005227 374 TNNFNSSTQIGQGGYGKVYKGILP-DG---TVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 448 (707)
Q Consensus 374 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~---~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~l 448 (707)
.++|+..+.||+|+||.||+|... ++ ..+|+|.+.... ....+.+.+|++++++++|+||+++++++...+..++
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 83 (268)
T cd05063 4 PSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMI 83 (268)
T ss_pred hHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEE
Confidence 457888999999999999999964 33 379999987543 3335678999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCC
Q 005227 449 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 528 (707)
Q Consensus 449 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~ 528 (707)
||||+++++|.+++.... ..+++..+..++.|++.||+|||+.+ ++||||||+||++++++.+||+|||++.....
T Consensus 84 v~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~al~~lH~~~---i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~ 159 (268)
T cd05063 84 ITEYMENGALDKYLRDHD-GEFSSYQLVGMLRGIAAGMKYLSDMN---YVHRDLAARNILVNSNLECKVSDFGLSRVLED 159 (268)
T ss_pred EEEcCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccchhhEEEcCCCcEEECCCccceeccc
Confidence 999999999999997643 45899999999999999999999998 99999999999999999999999999976543
Q ss_pred CCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHhhcccchhhcc
Q 005227 529 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVID 607 (707)
Q Consensus 529 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 607 (707)
.... .........+..|+|||++.+..++.++|||||||++|||++ |+.||..... .+..... ..
T Consensus 160 ~~~~----~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~-~~~~~~i---------~~ 225 (268)
T cd05063 160 DPEG----TYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSN-HEVMKAI---------ND 225 (268)
T ss_pred cccc----ceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCH-HHHHHHH---------hc
Confidence 2110 111111223457999999998899999999999999999998 9999965432 1111111 11
Q ss_pred CCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 005227 608 GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 649 (707)
Q Consensus 608 ~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~ 649 (707)
....+.+.+++..+.+++.+||+.+|++||++.++++.|+++
T Consensus 226 ~~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 226 GFRLPAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred CCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 112223445677889999999999999999999999998764
No 185
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=1.6e-36 Score=312.99 Aligned_cols=258 Identities=25% Similarity=0.407 Sum_probs=211.8
Q ss_pred cCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCC---hhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEE
Q 005227 375 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 450 (707)
Q Consensus 375 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~ 450 (707)
++|+..+.||+|+||.||+|... +|+.||+|.++... ....+.+.+|++++++++|+|++++++++...+..++||
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 81 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL 81 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence 57899999999999999999976 89999999886322 223467899999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhc--CCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCC
Q 005227 451 EFMSNGTLRDQLSAK--SKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 528 (707)
Q Consensus 451 E~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~ 528 (707)
||+++++|.+++... ....+++..++.++.++++||+|||+.+ |+|+||||+||+++.++.++|+|||++.....
T Consensus 82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~ 158 (267)
T cd08224 82 ELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKR---IMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred ecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCC---EecCCcChhhEEECCCCcEEEeccceeeeccC
Confidence 999999999998652 3445899999999999999999999998 99999999999999999999999999876543
Q ss_pred CCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccC
Q 005227 529 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDG 608 (707)
Q Consensus 529 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 608 (707)
.. .......++..|+|||.+.+..++.++|||||||++|||++|+.||.........+.. ....+
T Consensus 159 ~~-------~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~--------~~~~~ 223 (267)
T cd08224 159 KT-------TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCK--------KIEKC 223 (267)
T ss_pred CC-------cccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCccHHHHHh--------hhhcC
Confidence 21 1112345788999999999999999999999999999999999999644321111111 11112
Q ss_pred CCCCCCh-HHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhh
Q 005227 609 NMGSYPS-ECVEKFIKLALKCCQDETDARPSMSEVMRELESIW 650 (707)
Q Consensus 609 ~~~~~~~-~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~ 650 (707)
.....+. ..+..+.+++.+||..+|++||++.++++.++++.
T Consensus 224 ~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~ 266 (267)
T cd08224 224 DYPPLPADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEMH 266 (267)
T ss_pred CCCCCChhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence 2233333 56678999999999999999999999999998753
No 186
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=5.7e-37 Score=319.16 Aligned_cols=261 Identities=25% Similarity=0.401 Sum_probs=210.6
Q ss_pred HhcCCCccceEeeeCceEEEEEEeCC-----CcEEEEEEeccCC-hhhHHHHHHHHHHHHccCCCcceeEEEEEEe-CCe
Q 005227 373 ATNNFNSSTQIGQGGYGKVYKGILPD-----GTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE-EGE 445 (707)
Q Consensus 373 ~~~~~~~~~~lG~G~fg~Vy~~~~~~-----~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~-~~~ 445 (707)
..++|+..+.||+|+||.||+|...+ +..|++|++.... ....+.+.+|+.++++++|+||+++++++.. ...
T Consensus 4 ~~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~ 83 (280)
T cd05043 4 SRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEP 83 (280)
T ss_pred chhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence 45788899999999999999999765 6889999987543 2335678899999999999999999998765 467
Q ss_pred EEEEEecCCCCCHHHHHhhcCC------CCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEee
Q 005227 446 QMLVYEFMSNGTLRDQLSAKSK------EPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVAD 519 (707)
Q Consensus 446 ~~lV~E~~~~gsL~~~l~~~~~------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~D 519 (707)
.++++||+++++|.+++..... ..+++..++.++.|++.||+|||+.+ ++||||||+||++++++.+||+|
T Consensus 84 ~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~---i~H~di~p~nil~~~~~~~kl~d 160 (280)
T cd05043 84 PFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRG---VIHKDIAARNCVIDEELQVKITD 160 (280)
T ss_pred CEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccCHhhEEEcCCCcEEECC
Confidence 8999999999999999976422 45899999999999999999999988 99999999999999999999999
Q ss_pred ecccccCCCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHhh
Q 005227 520 FGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQ 598 (707)
Q Consensus 520 FGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~ellt-G~~pf~~~~~~~~~~~~~~~ 598 (707)
||+++.+...+.. .......++..|+|||++.+..++.++|||||||++||+++ |+.||..... .+..... .
T Consensus 161 ~g~~~~~~~~~~~-----~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~-~~~~~~~-~ 233 (280)
T cd05043 161 NALSRDLFPMDYH-----CLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDP-FEMAAYL-K 233 (280)
T ss_pred CCCcccccCCceE-----EeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCH-HHHHHHH-H
Confidence 9999865432210 11122345678999999999999999999999999999999 9999965432 1211111 1
Q ss_pred cccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 005227 599 SSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 651 (707)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~ 651 (707)
.+.....+..++..+.+++.+||..+|++||++.++++.|+.+.+
T Consensus 234 --------~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~ 278 (280)
T cd05043 234 --------DGYRLAQPINCPDELFAVMACCWALDPEERPSFSQLVQCLTDFHA 278 (280)
T ss_pred --------cCCCCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 111112234456788999999999999999999999999998764
No 187
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=5.9e-37 Score=322.01 Aligned_cols=258 Identities=27% Similarity=0.457 Sum_probs=206.7
Q ss_pred cCCCccceEeeeCceEEEEEEeC-CCc--EEEEEEeccC-ChhhHHHHHHHHHHHHcc-CCCcceeEEEEEEeCCeEEEE
Q 005227 375 NNFNSSTQIGQGGYGKVYKGILP-DGT--VVAVKRAQEG-SLQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQMLV 449 (707)
Q Consensus 375 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~--~vavK~l~~~-~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lV 449 (707)
++|++.+.||+|+||.||+|..+ ++. .+++|.++.. .....+.+.+|+++++++ +||||+++++++...+..++|
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 81 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIA 81 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEE
Confidence 57888999999999999999975 333 4788888743 233446789999999999 799999999999999999999
Q ss_pred EecCCCCCHHHHHhhcC--------------CCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcE
Q 005227 450 YEFMSNGTLRDQLSAKS--------------KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTA 515 (707)
Q Consensus 450 ~E~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ 515 (707)
|||+++++|.+++.... ...+++..++.++.|++.||+|||+.+ |+||||||+|||+++++.+
T Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~---ivH~dlkp~Nill~~~~~~ 158 (297)
T cd05089 82 IEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQ---FIHRDLAARNVLVGENLAS 158 (297)
T ss_pred EEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCcCCcceEEECCCCeE
Confidence 99999999999996532 134889999999999999999999988 9999999999999999999
Q ss_pred EEeeecccccCCCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc-CCCCCCCCchhHHHHH
Q 005227 516 KVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVN 594 (707)
Q Consensus 516 kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~ellt-G~~pf~~~~~~~~~~~ 594 (707)
||+|||++...... ........+..|+|||++.+..++.++|||||||++|||++ |..||...... +...
T Consensus 159 kl~dfg~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~-~~~~ 229 (297)
T cd05089 159 KIADFGLSRGEEVY--------VKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCA-ELYE 229 (297)
T ss_pred EECCcCCCccccce--------eccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHH-HHHH
Confidence 99999998643211 00111123557999999999999999999999999999998 99999654321 1111
Q ss_pred HHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcC
Q 005227 595 IAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMM 653 (707)
Q Consensus 595 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~ 653 (707)
. +..+.....+..++..+.+++.+||+.+|.+||++.++++.|+.+.+..
T Consensus 230 ~---------~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~~ 279 (297)
T cd05089 230 K---------LPQGYRMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLEAR 279 (297)
T ss_pred H---------HhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhh
Confidence 1 1111222334456678899999999999999999999999998887643
No 188
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=4.6e-37 Score=319.44 Aligned_cols=257 Identities=28% Similarity=0.461 Sum_probs=205.7
Q ss_pred HhcCCCccceEeeeCceEEEEEEeC------CCcEEEEEEeccCC-hhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCe
Q 005227 373 ATNNFNSSTQIGQGGYGKVYKGILP------DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGE 445 (707)
Q Consensus 373 ~~~~~~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~ 445 (707)
.+++|.+.+.||+|+||.||+|.+. .+..||+|...... ...+..+.+|+.++++++|+||+++++++.+.+.
T Consensus 4 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 83 (277)
T cd05036 4 PRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLP 83 (277)
T ss_pred CHHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCC
Confidence 3567889999999999999999974 35789999887543 3334678999999999999999999999998899
Q ss_pred EEEEEecCCCCCHHHHHhhcCC-----CCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCC---cEEE
Q 005227 446 QMLVYEFMSNGTLRDQLSAKSK-----EPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKF---TAKV 517 (707)
Q Consensus 446 ~~lV~E~~~~gsL~~~l~~~~~-----~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~---~~kl 517 (707)
.++||||+++++|.+++..... ..+++..++.++.||+.||+|||+.+ ++||||||+||+++.++ .+||
T Consensus 84 ~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~nil~~~~~~~~~~kl 160 (277)
T cd05036 84 RFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENH---FIHRDIAARNCLLTCKGPGRVAKI 160 (277)
T ss_pred cEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccchheEEEeccCCCcceEe
Confidence 9999999999999999976432 35899999999999999999999998 99999999999998754 5999
Q ss_pred eeecccccCCCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc-CCCCCCCCchhHHHHHHH
Q 005227 518 ADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIA 596 (707)
Q Consensus 518 ~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~ellt-G~~pf~~~~~~~~~~~~~ 596 (707)
+|||+++........ ........+..|+|||++.+..++.++|||||||++|||++ |+.||...... +.....
T Consensus 161 ~dfg~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~-~~~~~~ 234 (277)
T cd05036 161 ADFGMARDIYRASYY-----RKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQ-EVMEFV 234 (277)
T ss_pred ccCccccccCCccce-----ecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHH-HHHHHH
Confidence 999999865322110 01112223567999999999999999999999999999997 99998754331 111111
Q ss_pred hhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 005227 597 YQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELE 647 (707)
Q Consensus 597 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~ 647 (707)
........+..++..+.+++.+|++.+|++||++.++++.|+
T Consensus 235 ---------~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~ 276 (277)
T cd05036 235 ---------TGGGRLDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ 276 (277)
T ss_pred ---------HcCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence 111122344556678999999999999999999999998875
No 189
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=6.8e-37 Score=314.18 Aligned_cols=249 Identities=29% Similarity=0.470 Sum_probs=204.1
Q ss_pred hcCCCccceEeeeCceEEEEEEeCCCcEEEEEEeccCChhhHHHHHHHHHHHHccCCCcceeEEEEEE-eCCeEEEEEec
Q 005227 374 TNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCD-EEGEQMLVYEF 452 (707)
Q Consensus 374 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~-~~~~~~lV~E~ 452 (707)
..+|++.+.||+|+||.||+|..+ ++.||+|...... ..+.+.+|+.++++++|+|++++++++. ..+..++||||
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~ 81 (256)
T cd05082 5 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 81 (256)
T ss_pred HHhCeeeeeecccCCCeEEEEEEc-CCcEEEEEeCCCc--hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEEC
Confidence 347888999999999999999874 7789999986533 3457899999999999999999999764 45678999999
Q ss_pred CCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCC
Q 005227 453 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 532 (707)
Q Consensus 453 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 532 (707)
+++++|.+++.......+++..++.++.|++.||+|||+++ ++||||||+||++++++.+||+|||+++......
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~-- 156 (256)
T cd05082 82 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ-- 156 (256)
T ss_pred CCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---EeccccchheEEEcCCCcEEecCCccceeccccC--
Confidence 99999999998766666899999999999999999999998 9999999999999999999999999987543211
Q ss_pred CccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHhhcccchhhccCCCC
Q 005227 533 GIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 611 (707)
Q Consensus 533 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 611 (707)
....++..|+|||++.+..++.++|||||||++|||++ |+.||..... .+..... . .+...
T Consensus 157 --------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~-~~~~~~~-~--------~~~~~ 218 (256)
T cd05082 157 --------DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL-KDVVPRV-E--------KGYKM 218 (256)
T ss_pred --------CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCH-HHHHHHH-h--------cCCCC
Confidence 12234568999999999999999999999999999998 9999864322 1111111 1 11112
Q ss_pred CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 005227 612 SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELES 648 (707)
Q Consensus 612 ~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~ 648 (707)
..+..++..+.+++.+|++.+|++||++.++++.|+.
T Consensus 219 ~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 255 (256)
T cd05082 219 DAPDGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEH 255 (256)
T ss_pred CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhc
Confidence 2345567889999999999999999999999998875
No 190
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=3.4e-38 Score=336.60 Aligned_cols=192 Identities=27% Similarity=0.357 Sum_probs=161.7
Q ss_pred EeeeCceEEEEEEeC-CCcEEEEEEeccCChhh---HHHHHHHHHHHHcc---CCCcceeEEEEEEeCCeEEEEEecCCC
Q 005227 383 IGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQG---EKEFLTEIQFLSRL---HHRNLVSLVGYCDEEGEQMLVYEFMSN 455 (707)
Q Consensus 383 lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~---~~~~~~E~~~l~~l---~h~nIv~l~~~~~~~~~~~lV~E~~~~ 455 (707)
||+|+||+||+|... +++.||||++....... ...+..|..++... +||||+++++++......++||||+++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 699999999999965 68999999986532221 23445667777665 699999999999999999999999999
Q ss_pred CCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCCCcc
Q 005227 456 GTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIV 535 (707)
Q Consensus 456 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 535 (707)
|+|.+++... ..+++..++.++.||++||+|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 81 g~L~~~l~~~--~~~~~~~~~~~~~qil~al~~LH~~~---ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~----- 150 (330)
T cd05586 81 GELFWHLQKE--GRFSEDRAKFYIAELVLALEHLHKYD---IVYRDLKPENILLDATGHIALCDFGLSKANLTDN----- 150 (330)
T ss_pred ChHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeEECCCCCEEEecCCcCcCCCCCC-----
Confidence 9999998654 35899999999999999999999998 9999999999999999999999999987532211
Q ss_pred ccceecccccCCCccchhhhccC-CCCCchhhHHHHHHHHHHHcCCCCCCCC
Q 005227 536 PAHVSTVVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVFLELLTGMQPISHG 586 (707)
Q Consensus 536 ~~~~~~~~~gt~~y~aPE~~~~~-~~s~~sDVwSlGvll~elltG~~pf~~~ 586 (707)
.......||..|+|||++.+. .++.++|||||||++|||++|+.||...
T Consensus 151 --~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~ 200 (330)
T cd05586 151 --KTTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAE 200 (330)
T ss_pred --CCccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCC
Confidence 122345689999999999764 5899999999999999999999999653
No 191
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=5.5e-37 Score=314.01 Aligned_cols=248 Identities=28% Similarity=0.465 Sum_probs=200.0
Q ss_pred ceEeeeCceEEEEEEeC-CCcEEEEEEeccCC-hhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEecCCCCCH
Q 005227 381 TQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTL 458 (707)
Q Consensus 381 ~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL 458 (707)
+.||+|+||.||+|... +++.||+|...... ......+.+|++++++++|+||+++++++...+..++||||+++++|
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF 80 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcH
Confidence 46899999999999975 78999999876533 23356789999999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCCCccccc
Q 005227 459 RDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAH 538 (707)
Q Consensus 459 ~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~ 538 (707)
.+++.... ..+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++........ ..
T Consensus 81 ~~~~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~-----~~ 151 (252)
T cd05084 81 LTFLRTEG-PRLKVKELIQMVENAAAGMEYLESKH---CIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVY-----AS 151 (252)
T ss_pred HHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCC---ccccccchheEEEcCCCcEEECccccCcccccccc-----cc
Confidence 99996543 35899999999999999999999998 99999999999999999999999999875432110 00
Q ss_pred eecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHhhcccchhhccCCCCCCChHH
Q 005227 539 VSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSEC 617 (707)
Q Consensus 539 ~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 617 (707)
.......+..|+|||.+.+..++.++|||||||++|||++ |..||........ ... +........+..+
T Consensus 152 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~--~~~--------~~~~~~~~~~~~~ 221 (252)
T cd05084 152 TGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQT--REA--------IEQGVRLPCPELC 221 (252)
T ss_pred cCCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHH--HHH--------HHcCCCCCCcccC
Confidence 0111123457999999999999999999999999999998 8888864332111 110 1111122345566
Q ss_pred HHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 005227 618 VEKFIKLALKCCQDETDARPSMSEVMRELE 647 (707)
Q Consensus 618 ~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~ 647 (707)
+..+.+++.+|++.+|++||++.++.+.|+
T Consensus 222 ~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 251 (252)
T cd05084 222 PDAVYRLMERCWEYDPGQRPSFSTVHQELQ 251 (252)
T ss_pred CHHHHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence 778999999999999999999999998875
No 192
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=7e-37 Score=319.14 Aligned_cols=265 Identities=28% Similarity=0.434 Sum_probs=205.4
Q ss_pred cCCCccceEeeeCceEEEEEEeC-----CCcEEEEEEeccCChhhHHHHHHHHHHHHccCCCcceeEEEEEEe--CCeEE
Q 005227 375 NNFNSSTQIGQGGYGKVYKGILP-----DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE--EGEQM 447 (707)
Q Consensus 375 ~~~~~~~~lG~G~fg~Vy~~~~~-----~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~--~~~~~ 447 (707)
.+|++.+.||+|+||+||+|..+ +++.||+|.+........+.+.+|++++++++||||+++++++.. ....+
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 83 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLR 83 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceE
Confidence 47888999999999999999742 578999999987665556789999999999999999999998754 34689
Q ss_pred EEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCC
Q 005227 448 LVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAP 527 (707)
Q Consensus 448 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~ 527 (707)
+||||+++++|.+++.... ..+++..++.++.|++.||+|||+.+ |+||||||+||++++++.+||+|||+++...
T Consensus 84 lv~e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~~l~~aL~~LH~~~---i~H~dlkp~nili~~~~~~~l~dfg~~~~~~ 159 (284)
T cd05081 84 LVMEYLPYGSLRDYLQKHR-ERLDHRKLLLYASQICKGMEYLGSKR---YVHRDLATRNILVESENRVKIGDFGLTKVLP 159 (284)
T ss_pred EEEEecCCCCHHHHHHhcC-cCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCCHhhEEECCCCeEEECCCccccccc
Confidence 9999999999999996542 35899999999999999999999998 9999999999999999999999999998764
Q ss_pred CCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcc-------
Q 005227 528 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSS------- 600 (707)
Q Consensus 528 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~------- 600 (707)
..... ........++..|+|||++.+..++.++|||||||++|||++|..++...... +........
T Consensus 160 ~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 233 (284)
T cd05081 160 QDKEY----YKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAE--FMRMMGNDKQGQMIVY 233 (284)
T ss_pred CCCcc----eeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchh--hhhhcccccccccchH
Confidence 32210 00111122345699999999989999999999999999999987765432211 000000000
Q ss_pred cchhhc-cCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 005227 601 MMFSVI-DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 649 (707)
Q Consensus 601 ~~~~~~-~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~ 649 (707)
.+.... .......+..++..+.+++.+||+.+|++|||+.++++.|+.+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~ 283 (284)
T cd05081 234 HLIELLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI 283 (284)
T ss_pred HHHHHHhcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence 000111 1112223445667899999999999999999999999998865
No 193
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=7.7e-37 Score=322.27 Aligned_cols=263 Identities=25% Similarity=0.488 Sum_probs=211.1
Q ss_pred HHhcCCCccceEeeeCceEEEEEEeC--------CCcEEEEEEeccCC-hhhHHHHHHHHHHHHcc-CCCcceeEEEEEE
Q 005227 372 LATNNFNSSTQIGQGGYGKVYKGILP--------DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRL-HHRNLVSLVGYCD 441 (707)
Q Consensus 372 ~~~~~~~~~~~lG~G~fg~Vy~~~~~--------~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~ 441 (707)
...++|++.+.||+|+||.||+|... ++..||+|.+.... ....+.+.+|+.+++.+ +|+||+++++++.
T Consensus 12 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~ 91 (304)
T cd05101 12 FSRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACT 91 (304)
T ss_pred ccHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEe
Confidence 44567888999999999999999741 34579999987533 23346789999999999 8999999999999
Q ss_pred eCCeEEEEEecCCCCCHHHHHhhcC--------------CCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCE
Q 005227 442 EEGEQMLVYEFMSNGTLRDQLSAKS--------------KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNI 507 (707)
Q Consensus 442 ~~~~~~lV~E~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NI 507 (707)
..+..++||||+++|+|.+++.... ...+++..+..++.||++||+|||+.+ |+||||||+||
T Consensus 92 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~g---ivH~dlkp~Ni 168 (304)
T cd05101 92 QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQK---CIHRDLAARNV 168 (304)
T ss_pred cCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCC---eeecccccceE
Confidence 9999999999999999999997642 235788899999999999999999998 99999999999
Q ss_pred EEcCCCcEEEeeecccccCCCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc-CCCCCCCC
Q 005227 508 LLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHG 586 (707)
Q Consensus 508 Ll~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~ellt-G~~pf~~~ 586 (707)
++++++.+||+|||+++........ .......++..|+|||++.+..++.++||||||+++|||++ |..||...
T Consensus 169 li~~~~~~kl~D~g~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~ 243 (304)
T cd05101 169 LVTENNVMKIADFGLARDVNNIDYY-----KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI 243 (304)
T ss_pred EEcCCCcEEECCCccceeccccccc-----ccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccC
Confidence 9999999999999999866432211 11122345678999999999999999999999999999998 77887543
Q ss_pred chhHHHHHHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhc
Q 005227 587 KNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNM 652 (707)
Q Consensus 587 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~ 652 (707)
. ..+...... .......+..++..+.+++.+||+.+|++||++.++++.|+++...
T Consensus 244 ~-~~~~~~~~~---------~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~~ 299 (304)
T cd05101 244 P-VEELFKLLK---------EGHRMDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILTL 299 (304)
T ss_pred C-HHHHHHHHH---------cCCcCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHHh
Confidence 2 222222111 1112223456678899999999999999999999999999987653
No 194
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=1.3e-37 Score=326.93 Aligned_cols=283 Identities=27% Similarity=0.401 Sum_probs=208.6
Q ss_pred CCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCChh-----hHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEE
Q 005227 376 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ-----GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 449 (707)
Q Consensus 376 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~-----~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV 449 (707)
+|+..+.||+|+||.||+|... +++.||||.+...... ....+..|++++++++|+||+++++++.+.+..++|
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV 80 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence 4778899999999999999965 6899999998764332 235677899999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCC
Q 005227 450 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 529 (707)
Q Consensus 450 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~ 529 (707)
|||+ +++|.+++.... ..+++..++.++.||++||+|||+++ |+|+||||+||+++.++.+||+|||+++.....
T Consensus 81 ~e~~-~~~L~~~i~~~~-~~~~~~~~~~~~~qi~~al~~lH~~~---i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~ 155 (298)
T cd07841 81 FEFM-ETDLEKVIKDKS-IVLTPADIKSYMLMTLRGLEYLHSNW---ILHRDLKPNNLLIASDGVLKLADFGLARSFGSP 155 (298)
T ss_pred Eccc-CCCHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHhCC---eeecCCChhhEEEcCCCCEEEccceeeeeccCC
Confidence 9999 899999997643 36999999999999999999999999 999999999999999999999999999866432
Q ss_pred CCCCccccceecccccCCCccchhhhcc-CCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccC
Q 005227 530 DIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDG 608 (707)
Q Consensus 530 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 608 (707)
. .......++..|+|||.+.+ ..++.++|||||||++|||++|..+|....+. +....... ..
T Consensus 156 ~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~-~~~~~~~~------~~-- 219 (298)
T cd07841 156 N-------RKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDI-DQLGKIFE------AL-- 219 (298)
T ss_pred C-------ccccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccH-HHHHHHHH------Hc--
Confidence 1 11122345778999999865 56789999999999999999997777543332 11111110 00
Q ss_pred CCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCCCCCCCC
Q 005227 609 NMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVS 688 (707)
Q Consensus 609 ~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f~ 688 (707)
.............+...+... ..+... .............+|+.+||..||++|+|++|+|+||||.
T Consensus 220 --~~~~~~~~~~~~~~~~~~~~~---~~~~~~--------~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~~~~~ 286 (298)
T cd07841 220 --GTPTEENWPGVTSLPDYVEFK---PFPPTP--------LKQIFPAASDDALDLLQRLLTLNPNKRITARQALEHPYFS 286 (298)
T ss_pred --CCCchhhhhhccccccccccc---ccCCcc--------hhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhCcccc
Confidence 000011111111111111100 001100 0111223344566899999999999999999999999998
Q ss_pred CCCC
Q 005227 689 SDVS 692 (707)
Q Consensus 689 ~~~~ 692 (707)
....
T Consensus 287 ~~~~ 290 (298)
T cd07841 287 NDPA 290 (298)
T ss_pred CCCC
Confidence 8654
No 195
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=3.5e-37 Score=320.02 Aligned_cols=257 Identities=28% Similarity=0.468 Sum_probs=209.0
Q ss_pred HhcCCCccceEeeeCceEEEEEEeCC------CcEEEEEEeccCC-hhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCe
Q 005227 373 ATNNFNSSTQIGQGGYGKVYKGILPD------GTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGE 445 (707)
Q Consensus 373 ~~~~~~~~~~lG~G~fg~Vy~~~~~~------~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~ 445 (707)
..++|++.+.||+|+||.||+|..++ +..||+|.+.... ......+.+|+.+++.++|+||+++++++.....
T Consensus 4 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~ 83 (277)
T cd05032 4 PREKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQP 83 (277)
T ss_pred chHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCC
Confidence 45688899999999999999998642 3689999987543 2334578899999999999999999999999999
Q ss_pred EEEEEecCCCCCHHHHHhhcC--------CCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEE
Q 005227 446 QMLVYEFMSNGTLRDQLSAKS--------KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKV 517 (707)
Q Consensus 446 ~~lV~E~~~~gsL~~~l~~~~--------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl 517 (707)
.++||||+++|+|.+++.... ...+++..++.++.|++.||.|||+.+ |+||||||+||++++++.+||
T Consensus 84 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~di~p~nill~~~~~~kl 160 (277)
T cd05032 84 TLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKK---FVHRDLAARNCMVAEDLTVKI 160 (277)
T ss_pred cEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC---ccccccChheEEEcCCCCEEE
Confidence 999999999999999997532 224788999999999999999999988 999999999999999999999
Q ss_pred eeecccccCCCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc-CCCCCCCCchhHHHHHHH
Q 005227 518 ADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIA 596 (707)
Q Consensus 518 ~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~ellt-G~~pf~~~~~~~~~~~~~ 596 (707)
+|||+++.....+.. .......++..|+|||.+.+..++.++|||||||++||+++ |..||...... ....
T Consensus 161 ~dfg~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~-~~~~-- 232 (277)
T cd05032 161 GDFGMTRDIYETDYY-----RKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNE-EVLK-- 232 (277)
T ss_pred CCcccchhhccCccc-----ccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHH-HHHH--
Confidence 999999765432210 11123346788999999998889999999999999999998 88898643321 1111
Q ss_pred hhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 005227 597 YQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELE 647 (707)
Q Consensus 597 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~ 647 (707)
....+.....+..++..+.+++.+||+.+|++|||+.++++.|+
T Consensus 233 -------~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~ 276 (277)
T cd05032 233 -------FVIDGGHLDLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLK 276 (277)
T ss_pred -------HHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence 11122233445566788999999999999999999999998875
No 196
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=5.8e-37 Score=333.61 Aligned_cols=265 Identities=22% Similarity=0.383 Sum_probs=210.5
Q ss_pred HHHHHhcCCCccceEeeeCceEEEEEEeC------CCcEEEEEEeccCChhh-HHHHHHHHHHHHccC-CCcceeEEEEE
Q 005227 369 EMALATNNFNSSTQIGQGGYGKVYKGILP------DGTVVAVKRAQEGSLQG-EKEFLTEIQFLSRLH-HRNLVSLVGYC 440 (707)
Q Consensus 369 ~l~~~~~~~~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~l~~~~~~~-~~~~~~E~~~l~~l~-h~nIv~l~~~~ 440 (707)
++....++|.+.++||+|+||.||+|+++ .++.||||++....... .+.+.+|++++.++. ||||++++++|
T Consensus 31 ~~~~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~ 110 (401)
T cd05107 31 AWEMPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGAC 110 (401)
T ss_pred cceecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEE
Confidence 34555667888999999999999999853 34689999997643332 347889999999997 99999999999
Q ss_pred EeCCeEEEEEecCCCCCHHHHHhhcCC-----------------------------------------------------
Q 005227 441 DEEGEQMLVYEFMSNGTLRDQLSAKSK----------------------------------------------------- 467 (707)
Q Consensus 441 ~~~~~~~lV~E~~~~gsL~~~l~~~~~----------------------------------------------------- 467 (707)
...+..++||||+++|+|.+++++...
T Consensus 111 ~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (401)
T cd05107 111 TKGGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYV 190 (401)
T ss_pred ccCCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCcc
Confidence 999999999999999999999975321
Q ss_pred -------------------------------------------CCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCC
Q 005227 468 -------------------------------------------EPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKA 504 (707)
Q Consensus 468 -------------------------------------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp 504 (707)
..+++..++.++.|++.||+|||+.+ |+||||||
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrdlkp 267 (401)
T cd05107 191 PMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKN---CVHRDLAA 267 (401)
T ss_pred chhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCC---cCcccCCc
Confidence 23677888999999999999999988 99999999
Q ss_pred CCEEEcCCCcEEEeeecccccCCCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc-CCCCC
Q 005227 505 SNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPI 583 (707)
Q Consensus 505 ~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~ellt-G~~pf 583 (707)
+|||+++++.+||+|||+++....... ........++..|+|||.+.+..++.++|||||||++|||++ |..||
T Consensus 268 ~NiLl~~~~~~kL~DfGla~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~ 342 (401)
T cd05107 268 RNVLICEGKLVKICDFGLARDIMRDSN-----YISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPY 342 (401)
T ss_pred ceEEEeCCCEEEEEecCcceecccccc-----cccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCC
Confidence 999999999999999999976432210 011122346788999999999899999999999999999998 88898
Q ss_pred CCCchhHHHHHHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhh
Q 005227 584 SHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIW 650 (707)
Q Consensus 584 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~ 650 (707)
............. ..+.....+..++..+.+++.+||+.+|.+||++.++++.|+.+.
T Consensus 343 ~~~~~~~~~~~~~---------~~~~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~~ 400 (401)
T cd05107 343 PELPMNEQFYNAI---------KRGYRMAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDLL 400 (401)
T ss_pred CCCCchHHHHHHH---------HcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence 6433211111111 111122344556788999999999999999999999999998753
No 197
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=5.4e-38 Score=333.38 Aligned_cols=250 Identities=27% Similarity=0.442 Sum_probs=211.2
Q ss_pred ccceEeeeCceEEEEEEeC--CCc--EEEEEEeccCChh-hHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEecC
Q 005227 379 SSTQIGQGGYGKVYKGILP--DGT--VVAVKRAQEGSLQ-GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 453 (707)
Q Consensus 379 ~~~~lG~G~fg~Vy~~~~~--~~~--~vavK~l~~~~~~-~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~ 453 (707)
..++||+|.||.|++|.|+ +|+ .||||.+...... ...+|.+|+.+|.+|+|+|+++|||+..+ ....||||.+
T Consensus 114 l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV~ELa 192 (1039)
T KOG0199|consen 114 LYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMVFELA 192 (1039)
T ss_pred HHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHHhhhc
Confidence 4678999999999999985 344 5899999876555 45789999999999999999999999987 6788999999
Q ss_pred CCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCCC
Q 005227 454 SNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEG 533 (707)
Q Consensus 454 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 533 (707)
+.|+|.+.|++.....|-......++.|||.||.||.+++ +|||||..+|+|+-....+||+|||+.+-+...+...
T Consensus 193 plGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskr---lvHRDLAARNlllasprtVKI~DFGLmRaLg~ned~Y 269 (1039)
T KOG0199|consen 193 PLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKR---LVHRDLAARNLLLASPRTVKICDFGLMRALGENEDMY 269 (1039)
T ss_pred ccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhh---hhhhhhhhhhheecccceeeeecccceeccCCCCcce
Confidence 9999999999866777999999999999999999999999 9999999999999999999999999999876543211
Q ss_pred ccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHhhcccchhhccCCCCC
Q 005227 534 IVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGS 612 (707)
Q Consensus 534 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 612 (707)
. ......-.+.|+|||.+....++.++|||+|||++||||| |..||..-.. .+ .+..+-++++..
T Consensus 270 v----m~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g-~q---------IL~~iD~~erLp 335 (1039)
T KOG0199|consen 270 V----MAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRG-IQ---------ILKNIDAGERLP 335 (1039)
T ss_pred E----ecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCH-HH---------HHHhccccccCC
Confidence 1 1122334678999999999999999999999999999999 8888864332 11 112223456677
Q ss_pred CChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 005227 613 YPSECVEKFIKLALKCCQDETDARPSMSEVMREL 646 (707)
Q Consensus 613 ~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L 646 (707)
-|..|++.+++++..||..+|.+||++..+.+.+
T Consensus 336 RPk~csedIY~imk~cWah~paDRptFsair~~~ 369 (1039)
T KOG0199|consen 336 RPKYCSEDIYQIMKNCWAHNPADRPTFSAIREDL 369 (1039)
T ss_pred CCCCChHHHHHHHHHhccCCccccccHHHHHHhH
Confidence 7899999999999999999999999999997443
No 198
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-39 Score=324.19 Aligned_cols=290 Identities=20% Similarity=0.291 Sum_probs=219.6
Q ss_pred HhcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHccC-C-C----cceeEEEEEEeCCe
Q 005227 373 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLH-H-R----NLVSLVGYCDEEGE 445 (707)
Q Consensus 373 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-h-~----nIv~l~~~~~~~~~ 445 (707)
.+++|.+...+|+|+||.|-.+.++ .+..||||+++.-. ...+..+-|+++++++. + | -+|.+.++|...++
T Consensus 87 l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~-kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrgh 165 (415)
T KOG0671|consen 87 LTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVD-KYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGH 165 (415)
T ss_pred cccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHH-HHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCc
Confidence 3789999999999999999999864 57899999987632 23456788999999993 2 2 37888999999999
Q ss_pred EEEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcC--------------
Q 005227 446 QMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDH-------------- 511 (707)
Q Consensus 446 ~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~-------------- 511 (707)
.|+|+|.+ |.|+.++|..++-.+++...++.|++|++++++|||+.+ ++|.||||+|||+.+
T Consensus 166 iCivfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~k---l~HTDLKPENILfvss~~~~~~~~k~~~~ 241 (415)
T KOG0671|consen 166 ICIVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLK---LTHTDLKPENILFVSSEYFKTYNPKKKVC 241 (415)
T ss_pred eEEEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcc---eeecCCChheEEEeccceEEEeccCCccc
Confidence 99999999 679999999988889999999999999999999999999 999999999999932
Q ss_pred ------CCcEEEeeecccccCCCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCC
Q 005227 512 ------KFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISH 585 (707)
Q Consensus 512 ------~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~ 585 (707)
+..+||+|||.|+.....+ ...+.|..|+|||++.+-.++.++||||+||||+|+.||...|..
T Consensus 242 ~~r~~ks~~I~vIDFGsAtf~~e~h----------s~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqt 311 (415)
T KOG0671|consen 242 FIRPLKSTAIKVIDFGSATFDHEHH----------STIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQT 311 (415)
T ss_pred eeccCCCcceEEEecCCcceeccCc----------ceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceeccc
Confidence 3468999999998754322 456789999999999999999999999999999999999999865
Q ss_pred CchhHHHHHHHhhcccchhhccCCCCCCChHHHHHH-----HHHHHHhcc--cCCCCCCCHHHHHH---HHHHhhhcCCC
Q 005227 586 GKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKF-----IKLALKCCQ--DETDARPSMSEVMR---ELESIWNMMPE 655 (707)
Q Consensus 586 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-----~~l~~~c~~--~~p~~RPt~~~v~~---~L~~~~~~~~~ 655 (707)
.++... +. +++ ..++++|....... ..-. +++ .....| .+.-+.+ -|..+......
T Consensus 312 Hen~EH-La-------MMe---rIlGp~P~~mi~r~~~~Kyf~~~--rldw~e~~~~~-~~k~v~~~ckpl~~~~~~~d~ 377 (415)
T KOG0671|consen 312 HENLEH-LA-------MME---RILGPIPSRMIKKTRKEKYFRRG--RLDWPEVSSKG-KSKYVFEPCKPLKKYMLQDDL 377 (415)
T ss_pred CCcHHH-HH-------HHH---HhhCCCcHHHhhhhhhHhhhhcc--cccCccccccc-cchhhhcCCccHHHHhccCcH
Confidence 443222 11 111 11233444333222 1111 222 111112 0122221 22233333334
Q ss_pred CCCCCCccccCCCCCCCCCCCCCCcCCCCCCCCCCC
Q 005227 656 SDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSSDV 691 (707)
Q Consensus 656 ~~~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f~~~~ 691 (707)
+..++.|||++||.+||.+|+|+.|||.||||....
T Consensus 378 e~~~LfDLl~~mL~fDP~~RiTl~EAL~HpFF~~~~ 413 (415)
T KOG0671|consen 378 EHVQLFDLLRRMLEFDPARRITLREALSHPFFARLT 413 (415)
T ss_pred HHhHHHHHHHHHHccCccccccHHHHhcCHHhhcCC
Confidence 445678999999999999999999999999998754
No 199
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=8.4e-38 Score=350.59 Aligned_cols=293 Identities=19% Similarity=0.241 Sum_probs=201.6
Q ss_pred HhcCCCccceEeeeCceEEEEEEeCC--CcEEEEEEe--------------c---cCChhhHHHHHHHHHHHHccCCCcc
Q 005227 373 ATNNFNSSTQIGQGGYGKVYKGILPD--GTVVAVKRA--------------Q---EGSLQGEKEFLTEIQFLSRLHHRNL 433 (707)
Q Consensus 373 ~~~~~~~~~~lG~G~fg~Vy~~~~~~--~~~vavK~l--------------~---~~~~~~~~~~~~E~~~l~~l~h~nI 433 (707)
..++|++.+.||+|+||+||++.++. +..+++|.+ . .........+.+|++++++++|+||
T Consensus 146 ~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnI 225 (501)
T PHA03210 146 FLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENI 225 (501)
T ss_pred hhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCc
Confidence 35689999999999999999987542 222222211 0 0111223567899999999999999
Q ss_pred eeEEEEEEeCCeEEEEEecCCCCCHHHHHhhcC---CCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEc
Q 005227 434 VSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKS---KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLD 510 (707)
Q Consensus 434 v~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~---~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~ 510 (707)
+++++++...+..++|+|++ .++|.+++.... ........++.++.||+.||+|||+++ ||||||||+|||++
T Consensus 226 v~l~~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~g---IiHrDLKP~NILl~ 301 (501)
T PHA03210 226 LKIEEILRSEANTYMITQKY-DFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKK---LIHRDIKLENIFLN 301 (501)
T ss_pred CcEeEEEEECCeeEEEEecc-ccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEC
Confidence 99999999999999999999 468888775432 122345667889999999999999998 99999999999999
Q ss_pred CCCcEEEeeecccccCCCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCC-CCCCc-h
Q 005227 511 HKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQP-ISHGK-N 588 (707)
Q Consensus 511 ~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~p-f~~~~-~ 588 (707)
.++.+||+|||+++...... ........||..|+|||++.+..++.++|||||||++|||++|..+ +.... .
T Consensus 302 ~~~~vkL~DFGla~~~~~~~------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~ 375 (501)
T PHA03210 302 CDGKIVLGDFGTAMPFEKER------EAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGK 375 (501)
T ss_pred CCCCEEEEeCCCceecCccc------ccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCC
Confidence 99999999999998664322 1122335689999999999999999999999999999999998754 43221 2
Q ss_pred hHHHHHHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCC-CHHHHHHHHHHhhhcCCCCCCCCCccccCC
Q 005227 589 IVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARP-SMSEVMRELESIWNMMPESDTKTPEFINSE 667 (707)
Q Consensus 589 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RP-t~~~v~~~L~~~~~~~~~~~~~~~dll~~~ 667 (707)
............ ..... .++.. ...+.+.+.. ......+ +...+++.+ .....+.++|.+|
T Consensus 376 ~~~~~~~~~~~~---~~~~~---~~p~~-~~~~~~~i~~---~~~~~~~~~~~~~~~~~--------~~~~~~~~li~km 437 (501)
T PHA03210 376 PGKQLLKIIDSL---SVCDE---EFPDP-PCKLFDYIDS---AEIDHAGHSVPPLIRNL--------GLPADFEYPLVKM 437 (501)
T ss_pred HHHHHHHHHHhc---ccChh---hcCCc-HHHHHHHhhh---hhcccCccchhhHHHhc--------CCChHHHHHHHHH
Confidence 222221111100 00111 11111 1122222211 1111111 222222211 1234566889999
Q ss_pred CCCCCCCCCCCCcCCCCCCCCCCCCC
Q 005227 668 HTSKEETPPSSSSMLKHPYVSSDVSG 693 (707)
Q Consensus 668 L~~dP~~R~sa~e~L~Hp~f~~~~~~ 693 (707)
|++||++||||+|+|+||||......
T Consensus 438 L~~DP~~Rpsa~elL~hp~f~~~~~~ 463 (501)
T PHA03210 438 LTFDWHLRPGAAELLALPLFSAEEEE 463 (501)
T ss_pred hccCcccCcCHHHHhhChhhhcCCch
Confidence 99999999999999999999876543
No 200
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=8.8e-37 Score=313.62 Aligned_cols=248 Identities=27% Similarity=0.410 Sum_probs=199.7
Q ss_pred eEeeeCceEEEEEEe---CCCcEEEEEEeccCCh--hhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEecCCCC
Q 005227 382 QIGQGGYGKVYKGIL---PDGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNG 456 (707)
Q Consensus 382 ~lG~G~fg~Vy~~~~---~~~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~g 456 (707)
.||+|+||+||+|.+ +++..||+|++..... ...+++.+|+.+++.++|+||+++++++. .+..++||||++++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~~ 80 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAELG 80 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCCC
Confidence 589999999999975 3578999999865432 23567899999999999999999999885 45678999999999
Q ss_pred CHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCCCccc
Q 005227 457 TLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVP 536 (707)
Q Consensus 457 sL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~ 536 (707)
+|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||++++++.+||+|||+++........
T Consensus 81 ~L~~~l~~~--~~~~~~~~~~i~~qi~~al~~lH~~~---i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~---- 151 (257)
T cd05116 81 PLNKFLQKN--KHVTEKNITELVHQVSMGMKYLEETN---FVHRDLAARNVLLVTQHYAKISDFGLSKALGADENY---- 151 (257)
T ss_pred cHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccchhhEEEcCCCeEEECCCccccccCCCCCe----
Confidence 999999654 35899999999999999999999998 999999999999999999999999999865432210
Q ss_pred cceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHhhcccchhhccCCCCCCCh
Q 005227 537 AHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPS 615 (707)
Q Consensus 537 ~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 615 (707)
........++..|+|||.+....++.++|||||||++|||++ |+.||..... ....... ..+.....+.
T Consensus 152 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~-~~~~~~i---------~~~~~~~~~~ 221 (257)
T cd05116 152 YKAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKG-NEVTQMI---------ESGERMECPQ 221 (257)
T ss_pred eeecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCH-HHHHHHH---------HCCCCCCCCC
Confidence 011122234678999999988889999999999999999998 9999965432 1111111 1122233455
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 005227 616 ECVEKFIKLALKCCQDETDARPSMSEVMRELESI 649 (707)
Q Consensus 616 ~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~ 649 (707)
.++.++.+++.+||+.+|++||++.+|.+.|++.
T Consensus 222 ~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~~ 255 (257)
T cd05116 222 RCPPEMYDLMKLCWTYGVDERPGFAVVELRLRNY 255 (257)
T ss_pred CCCHHHHHHHHHHhccCchhCcCHHHHHHHHhcc
Confidence 6778899999999999999999999999998764
No 201
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=1.8e-37 Score=325.10 Aligned_cols=281 Identities=25% Similarity=0.361 Sum_probs=206.4
Q ss_pred cCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCChh--hHHHHHHHHHHHHccCCCcceeEEEEEEeC--CeEEEE
Q 005227 375 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ--GEKEFLTEIQFLSRLHHRNLVSLVGYCDEE--GEQMLV 449 (707)
Q Consensus 375 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~--~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~--~~~~lV 449 (707)
++|+..+.||+|+||.||+|..+ +++.||+|.++..... ....+.+|+.++++++||||+++++++... +..++|
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv 84 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMV 84 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEE
Confidence 46888999999999999999976 6899999998754322 234677899999999999999999999777 899999
Q ss_pred EecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCC
Q 005227 450 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 529 (707)
Q Consensus 450 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~ 529 (707)
|||++ ++|.+++.... ..+++..++.++.|++.||+|||+.+ ++|+||||+||++++++.+||+|||+++.....
T Consensus 85 ~e~~~-~~L~~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~---i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~ 159 (293)
T cd07843 85 MEYVE-HDLKSLMETMK-QPFLQSEVKCLMLQLLSGVAHLHDNW---ILHRDLKTSNLLLNNRGILKICDFGLAREYGSP 159 (293)
T ss_pred ehhcC-cCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCCHHHEEECCCCcEEEeecCceeeccCC
Confidence 99996 59999887643 36899999999999999999999998 999999999999999999999999999865432
Q ss_pred CCCCccccceecccccCCCccchhhhccC-CCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccC
Q 005227 530 DIEGIVPAHVSTVVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDG 608 (707)
Q Consensus 530 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 608 (707)
. .......++..|+|||.+.+. .++.++||||||+++|||++|+.||...... ....... .
T Consensus 160 ~-------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~-~~~~~~~------~---- 221 (293)
T cd07843 160 L-------KPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEI-DQLNKIF------K---- 221 (293)
T ss_pred c-------cccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHH------H----
Confidence 1 112234568899999998764 4688999999999999999999999654332 1111110 0
Q ss_pred CCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCC--CCCCCccccCCCCCCCCCCCCCCcCCCCCC
Q 005227 609 NMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPES--DTKTPEFINSEHTSKEETPPSSSSMLKHPY 686 (707)
Q Consensus 609 ~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~--~~~~~dll~~~L~~dP~~R~sa~e~L~Hp~ 686 (707)
.........+..+.++...- .....++.... +...++.. .+...+++++||..+|++|||++|+|+|||
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~-------~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~~~ 292 (293)
T cd07843 222 LLGTPTEKIWPGFSELPGAK--KKTFTKYPYNQ-------LRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKHPY 292 (293)
T ss_pred HhCCCchHHHHHhhccchhc--ccccccccchh-------hhccccccCCChHHHHHHHHHhccCccccCCHHHHhcCCC
Confidence 00111111111111110000 00001111111 12223332 555678999999999999999999999999
Q ss_pred C
Q 005227 687 V 687 (707)
Q Consensus 687 f 687 (707)
|
T Consensus 293 f 293 (293)
T cd07843 293 F 293 (293)
T ss_pred C
Confidence 8
No 202
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=3.2e-37 Score=326.67 Aligned_cols=284 Identities=24% Similarity=0.338 Sum_probs=205.8
Q ss_pred CCCccceEeeeCceEEEEEEeC---CCcEEEEEEeccCC---hhhHHHHHHHHHHHHccCCCcceeEEEEEEeC--CeEE
Q 005227 376 NFNSSTQIGQGGYGKVYKGILP---DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE--GEQM 447 (707)
Q Consensus 376 ~~~~~~~lG~G~fg~Vy~~~~~---~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~--~~~~ 447 (707)
+|++.++||+|+||.||+|... +++.||+|.+.... ....+.+.+|+.++++++||||+++++++.+. +..+
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY 80 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence 4788899999999999999964 47899999987633 22345678899999999999999999999888 7899
Q ss_pred EEEecCCCCCHHHHHhhcC---CCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcC----CCcEEEeee
Q 005227 448 LVYEFMSNGTLRDQLSAKS---KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDH----KFTAKVADF 520 (707)
Q Consensus 448 lV~E~~~~gsL~~~l~~~~---~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~----~~~~kl~DF 520 (707)
+||||++ ++|.+++.... ...+++..++.++.|++.||+|||+.+ |+||||||+||+++. ++.+||+||
T Consensus 81 lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~h~dlkp~Nil~~~~~~~~~~~kl~Df 156 (316)
T cd07842 81 LLFDYAE-HDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNW---VLHRDLKPANILVMGEGPERGVVKIGDL 156 (316)
T ss_pred EEEeCCC-cCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCC---EeeCCCCHHHEEEcCCCCccceEEECCC
Confidence 9999996 47777775422 236899999999999999999999998 999999999999999 999999999
Q ss_pred cccccCCCCCCCCccccceecccccCCCccchhhhcc-CCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhc
Q 005227 521 GLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQS 599 (707)
Q Consensus 521 Gla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~ 599 (707)
|+++........ ........++..|+|||++.+ ..++.++|||||||+++||++|+.||.........
T Consensus 157 g~~~~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~------- 225 (316)
T cd07842 157 GLARLFNAPLKP----LADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKK------- 225 (316)
T ss_pred ccccccCCCccc----ccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccc-------
Confidence 999865432210 111233467889999999876 45889999999999999999999999643321100
Q ss_pred ccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHH----------------HHHHhhhcCCCCCCCCCcc
Q 005227 600 SMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMR----------------ELESIWNMMPESDTKTPEF 663 (707)
Q Consensus 600 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~----------------~L~~~~~~~~~~~~~~~dl 663 (707)
. .+ .....+.+++..+-...+..++.+.+..+ .+..........+....++
T Consensus 226 ----------~--~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (316)
T cd07842 226 ----------S--NP-FQRDQLERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDL 292 (316)
T ss_pred ----------c--ch-hHHHHHHHHHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHH
Confidence 0 00 00011112222221112111111111100 0111111112445566789
Q ss_pred ccCCCCCCCCCCCCCCcCCCCCCC
Q 005227 664 INSEHTSKEETPPSSSSMLKHPYV 687 (707)
Q Consensus 664 l~~~L~~dP~~R~sa~e~L~Hp~f 687 (707)
+.+||+.||++|||++|+++||||
T Consensus 293 i~~~l~~~P~~Rps~~eil~~~~f 316 (316)
T cd07842 293 LRKLLEYDPTKRITAEEALEHPYF 316 (316)
T ss_pred HHHHhcCCcccCcCHHHHhcCCCC
Confidence 999999999999999999999998
No 203
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=2.9e-37 Score=332.55 Aligned_cols=290 Identities=21% Similarity=0.309 Sum_probs=212.7
Q ss_pred HhcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccC--ChhhHHHHHHHHHHHHccCCCcceeEEEEEEeC------
Q 005227 373 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEG--SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE------ 443 (707)
Q Consensus 373 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~------ 443 (707)
..++|+..+.||+|+||.||+|... +++.||+|.+... .....+.+.+|+.++++++|+||+++++++...
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 93 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEF 93 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcccc
Confidence 4578999999999999999999964 7899999998642 223345678899999999999999999998543
Q ss_pred CeEEEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeeccc
Q 005227 444 GEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLS 523 (707)
Q Consensus 444 ~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla 523 (707)
...++||||+. ++|.+.+... +++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++
T Consensus 94 ~~~~lv~e~~~-~~l~~~~~~~----l~~~~~~~~~~ql~~aL~~LH~~g---i~H~dlkp~Nil~~~~~~~kL~Dfg~~ 165 (353)
T cd07850 94 QDVYLVMELMD-ANLCQVIQMD----LDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLA 165 (353)
T ss_pred CcEEEEEeccC-CCHHHHHhhc----CCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEECCCCCEEEccCccc
Confidence 35799999995 5888888532 888999999999999999999998 999999999999999999999999999
Q ss_pred ccCCCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccch
Q 005227 524 RLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMF 603 (707)
Q Consensus 524 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~ 603 (707)
+...... ......++..|+|||.+.+..++.++|||||||++|+|++|+.||........+.. ..
T Consensus 166 ~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~-~~------ 230 (353)
T cd07850 166 RTAGTSF--------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNK-II------ 230 (353)
T ss_pred eeCCCCC--------CCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHH-HH------
Confidence 8653221 12234578899999999999999999999999999999999999975543222211 11
Q ss_pred hhccCCCCCCChHHHHHHHHHHHHhcccCCCCCC-CHHHHHHHHHHhhhc---CCCCCCCCCccccCCCCCCCCCCCCCC
Q 005227 604 SVIDGNMGSYPSECVEKFIKLALKCCQDETDARP-SMSEVMRELESIWNM---MPESDTKTPEFINSEHTSKEETPPSSS 679 (707)
Q Consensus 604 ~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RP-t~~~v~~~L~~~~~~---~~~~~~~~~dll~~~L~~dP~~R~sa~ 679 (707)
...+..+.+....+...........+..++ .+.++.......... .........+||.+||+.||++|||++
T Consensus 231 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ 306 (353)
T cd07850 231 ----EQLGTPSDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVD 306 (353)
T ss_pred ----HhcCCCCHHHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHH
Confidence 112223344444433333333333332221 222221110000000 001223456899999999999999999
Q ss_pred cCCCCCCCCC
Q 005227 680 SMLKHPYVSS 689 (707)
Q Consensus 680 e~L~Hp~f~~ 689 (707)
|+|+||||..
T Consensus 307 eiL~~~~~~~ 316 (353)
T cd07850 307 DALQHPYINV 316 (353)
T ss_pred HHhcChhHhh
Confidence 9999999863
No 204
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=7.9e-37 Score=314.55 Aligned_cols=255 Identities=25% Similarity=0.442 Sum_probs=208.2
Q ss_pred HhcCCCccceEeeeCceEEEEEEeCCCcEEEEEEeccCChhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEec
Q 005227 373 ATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 452 (707)
Q Consensus 373 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~ 452 (707)
..++|+..+.||+|+||.||+|...++..+|+|.+.... ...+.+.+|++++++++|+||+++++++.. ...++||||
T Consensus 4 ~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e~ 81 (260)
T cd05073 4 PRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEF 81 (260)
T ss_pred cccceeEEeEecCccceEEEEEEecCCccEEEEecCCCh-hHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEEe
Confidence 456788999999999999999998778889999887533 234678899999999999999999999877 778999999
Q ss_pred CCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCC
Q 005227 453 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 532 (707)
Q Consensus 453 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 532 (707)
+++++|.+++.......+++..++.++.|++.||.|||+.+ ++|+||||+||+++.++.+||+|||.+........
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~---i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~- 157 (260)
T cd05073 82 MAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLARVIEDNEY- 157 (260)
T ss_pred CCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCC---ccccccCcceEEEcCCCcEEECCCcceeeccCCCc-
Confidence 99999999998765567899999999999999999999988 99999999999999999999999999976543211
Q ss_pred CccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHhhcccchhhccCCCC
Q 005227 533 GIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 611 (707)
Q Consensus 533 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 611 (707)
.......++..|+|||++....++.++|||||||++||+++ |+.||....... ..... ......
T Consensus 158 -----~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~-~~~~~---------~~~~~~ 222 (260)
T cd05073 158 -----TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPE-VIRAL---------ERGYRM 222 (260)
T ss_pred -----ccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHH-HHHHH---------hCCCCC
Confidence 11122345678999999998889999999999999999999 898986543311 11110 111111
Q ss_pred CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 005227 612 SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELES 648 (707)
Q Consensus 612 ~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~ 648 (707)
..+...+..+.+++.+|++.+|++||++.++.+.|+.
T Consensus 223 ~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~ 259 (260)
T cd05073 223 PRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD 259 (260)
T ss_pred CCcccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 2334556789999999999999999999999998874
No 205
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=6.9e-38 Score=321.80 Aligned_cols=198 Identities=36% Similarity=0.588 Sum_probs=173.1
Q ss_pred CCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCChhhHH--HHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEecC
Q 005227 377 FNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEK--EFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 453 (707)
Q Consensus 377 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~--~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~ 453 (707)
|+..+.||+|+||+||++... +++.||+|++......... ...+|+.++++++|+||+++++++.+....++||||+
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~ 80 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC 80 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc
Confidence 567899999999999999976 5779999999876554432 3456999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCCC
Q 005227 454 SNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEG 533 (707)
Q Consensus 454 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 533 (707)
++++|.+++.. ...+++..++.++.|+++||+|||+.+ |+|+||||+||++++++.++|+|||.+......
T Consensus 81 ~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~L~~Lh~~~---i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~---- 151 (260)
T PF00069_consen 81 PGGSLQDYLQK--NKPLSEEEILKIAYQILEALAYLHSKG---IVHRDIKPENILLDENGEVKLIDFGSSVKLSEN---- 151 (260)
T ss_dssp TTEBHHHHHHH--HSSBBHHHHHHHHHHHHHHHHHHHHTT---EEESSBSGGGEEESTTSEEEESSGTTTEESTST----
T ss_pred ccccccccccc--ccccccccccccccccccccccccccc---ccccccccccccccccccccccccccccccccc----
Confidence 99999999973 335899999999999999999999998 999999999999999999999999999754111
Q ss_pred ccccceecccccCCCccchhhhc-cCCCCCchhhHHHHHHHHHHHcCCCCCCCC
Q 005227 534 IVPAHVSTVVKGTPGYLDPEYFL-THKLTDKSDVYSLGVVFLELLTGMQPISHG 586 (707)
Q Consensus 534 ~~~~~~~~~~~gt~~y~aPE~~~-~~~~s~~sDVwSlGvll~elltG~~pf~~~ 586 (707)
........++..|+|||++. +..++.++||||+|+++|+|++|..||...
T Consensus 152 ---~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~ 202 (260)
T PF00069_consen 152 ---NENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEES 202 (260)
T ss_dssp ---TSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTS
T ss_pred ---ccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 22334556889999999998 889999999999999999999999999754
No 206
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=1.1e-36 Score=318.65 Aligned_cols=258 Identities=30% Similarity=0.491 Sum_probs=206.7
Q ss_pred CCCccceEeeeCceEEEEEEeC------CCcEEEEEEeccCCh-hhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEE
Q 005227 376 NFNSSTQIGQGGYGKVYKGILP------DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 448 (707)
Q Consensus 376 ~~~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~l 448 (707)
+|++.+.||+|+||+||+|... ....+|+|.+..... .....+.+|+.+++.++||||+++++.+...+..++
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 80 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLL 80 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEE
Confidence 4778899999999999999852 235799998875433 334678899999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhcC----------------------CCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCC
Q 005227 449 VYEFMSNGTLRDQLSAKS----------------------KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASN 506 (707)
Q Consensus 449 V~E~~~~gsL~~~l~~~~----------------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~N 506 (707)
||||+.+++|.+++.... ...+++..++.++.|++.||+|||+.+ |+||||||+|
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~---ivH~dikp~n 157 (290)
T cd05045 81 IVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMK---LVHRDLAARN 157 (290)
T ss_pred EEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCC---eehhhhhhhe
Confidence 999999999999986421 235789999999999999999999998 9999999999
Q ss_pred EEEcCCCcEEEeeecccccCCCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc-CCCCCCC
Q 005227 507 ILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISH 585 (707)
Q Consensus 507 ILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~ellt-G~~pf~~ 585 (707)
||+++++.+||+|||+++........ .......++..|+|||.+.+..++.++||||||+++|||++ |..||..
T Consensus 158 ill~~~~~~kl~dfg~~~~~~~~~~~-----~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~ 232 (290)
T cd05045 158 VLVAEGRKMKISDFGLSRDVYEEDSY-----VKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPG 232 (290)
T ss_pred EEEcCCCcEEeccccccccccCccch-----hcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCC
Confidence 99999999999999999765322110 01122345678999999999999999999999999999998 9988864
Q ss_pred CchhHHHHHHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 005227 586 GKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 651 (707)
Q Consensus 586 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~ 651 (707)
... .+.... .. .......+..++..+.+++..|++.+|++||++.++++.|+++..
T Consensus 233 ~~~-~~~~~~-~~--------~~~~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~~ 288 (290)
T cd05045 233 IAP-ERLFNL-LK--------TGYRMERPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMMV 288 (290)
T ss_pred CCH-HHHHHH-Hh--------CCCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHHh
Confidence 332 111111 11 111122345566789999999999999999999999999998754
No 207
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=1.3e-36 Score=310.76 Aligned_cols=247 Identities=29% Similarity=0.482 Sum_probs=201.1
Q ss_pred ceEeeeCceEEEEEEeCCCcEEEEEEeccCChh-hHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEecCCCCCHH
Q 005227 381 TQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQ-GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLR 459 (707)
Q Consensus 381 ~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~-~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~ 459 (707)
++||+|+||.||+|..++++.||+|.+...... ....+.+|++++++++||||+++++++...+..++||||+++++|.
T Consensus 1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 80 (250)
T cd05085 1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFL 80 (250)
T ss_pred CccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHH
Confidence 368999999999999888999999998764432 3457889999999999999999999999999999999999999999
Q ss_pred HHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCCCccccce
Q 005227 460 DQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHV 539 (707)
Q Consensus 460 ~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~ 539 (707)
+++.... ..+++..++.++.|++.||.|||+.+ ++||||||+||++++++.+||+|||++........ ..
T Consensus 81 ~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~---~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~------~~ 150 (250)
T cd05085 81 SFLRKKK-DELKTKQLVKFALDAAAGMAYLESKN---CIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIY------SS 150 (250)
T ss_pred HHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccChheEEEcCCCeEEECCCccceecccccc------cc
Confidence 9986543 35889999999999999999999998 99999999999999999999999999875432110 01
Q ss_pred ecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHhhcccchhhccCCCCCCChHHH
Q 005227 540 STVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECV 618 (707)
Q Consensus 540 ~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 618 (707)
.....++..|+|||++.+..++.++||||||+++||+++ |..||...... ...... ..+.....+..++
T Consensus 151 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~-~~~~~~---------~~~~~~~~~~~~~ 220 (250)
T cd05085 151 SGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQ-QAREQV---------EKGYRMSCPQKCP 220 (250)
T ss_pred CCCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHH-HHHHHH---------HcCCCCCCCCCCC
Confidence 112234578999999999999999999999999999998 99999654321 111111 1111223344567
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 005227 619 EKFIKLALKCCQDETDARPSMSEVMRELE 647 (707)
Q Consensus 619 ~~l~~l~~~c~~~~p~~RPt~~~v~~~L~ 647 (707)
..+.+++.+|++.+|++||++.++.+.|.
T Consensus 221 ~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 221 DDVYKVMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred HHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence 88999999999999999999999988764
No 208
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=9.1e-37 Score=322.18 Aligned_cols=261 Identities=26% Similarity=0.485 Sum_probs=209.1
Q ss_pred hcCCCccceEeeeCceEEEEEEeC--------CCcEEEEEEeccCC-hhhHHHHHHHHHHHHcc-CCCcceeEEEEEEeC
Q 005227 374 TNNFNSSTQIGQGGYGKVYKGILP--------DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEE 443 (707)
Q Consensus 374 ~~~~~~~~~lG~G~fg~Vy~~~~~--------~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~ 443 (707)
.++|.+.+.||+|+||.||+|... +...||+|.+.... .....++.+|+++++.+ +|+||+++++++...
T Consensus 17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~ 96 (307)
T cd05098 17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 96 (307)
T ss_pred hHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecC
Confidence 457889999999999999999852 23579999987543 23345788899999999 799999999999999
Q ss_pred CeEEEEEecCCCCCHHHHHhhcCC--------------CCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEE
Q 005227 444 GEQMLVYEFMSNGTLRDQLSAKSK--------------EPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILL 509 (707)
Q Consensus 444 ~~~~lV~E~~~~gsL~~~l~~~~~--------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl 509 (707)
+..++||||+++|+|.+++..... ..+++..++.++.|++.||+|||+.+ ++||||||+||++
T Consensus 97 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~g---i~H~dlkp~Nill 173 (307)
T cd05098 97 GPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKK---CIHRDLAARNVLV 173 (307)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCC---cccccccHHheEE
Confidence 999999999999999999976421 35889999999999999999999998 9999999999999
Q ss_pred cCCCcEEEeeecccccCCCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc-CCCCCCCCch
Q 005227 510 DHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKN 588 (707)
Q Consensus 510 ~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~ellt-G~~pf~~~~~ 588 (707)
++++.+||+|||.++........ .......++..|+|||++.+..++.++|||||||++|||++ |..||....
T Consensus 174 ~~~~~~kL~dfg~a~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~- 247 (307)
T cd05098 174 TEDNVMKIADFGLARDIHHIDYY-----KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP- 247 (307)
T ss_pred cCCCcEEECCCcccccccccchh-----hccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCC-
Confidence 99999999999998765322110 01111224568999999999999999999999999999998 888885432
Q ss_pred hHHHHHHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhc
Q 005227 589 IVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNM 652 (707)
Q Consensus 589 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~ 652 (707)
..+..... . .......+..++..+.+++.+|++.+|++||++.++++.|+.+...
T Consensus 248 ~~~~~~~~-~--------~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~~ 302 (307)
T cd05098 248 VEELFKLL-K--------EGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILAL 302 (307)
T ss_pred HHHHHHHH-H--------cCCCCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHHH
Confidence 22211111 1 1112234556678899999999999999999999999999987653
No 209
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1e-37 Score=327.63 Aligned_cols=264 Identities=23% Similarity=0.368 Sum_probs=208.3
Q ss_pred cCCCccceEeeeCceEEEEEEe-CCCcEEEEEEeccCChhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEecC
Q 005227 375 NNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 453 (707)
Q Consensus 375 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~ 453 (707)
.+|+..+.||.|+||+||+|.. .+++.||+|.+........+.+.+|+.+++.++|+||+++++++...+..++|+||+
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 98 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYL 98 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEec
Confidence 4688899999999999999995 478999999987655555678899999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCCC
Q 005227 454 SNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEG 533 (707)
Q Consensus 454 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 533 (707)
++++|.+++... .+++..+..++.|++.||+|||+.+ ++|+||||+||+++.++.+||+|||++.......
T Consensus 99 ~~~~L~~~~~~~---~l~~~~~~~i~~~l~~al~~LH~~~---i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~--- 169 (296)
T cd06655 99 AGGSLTDVVTET---CMDEAQIAAVCRECLQALEFLHANQ---VIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQ--- 169 (296)
T ss_pred CCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEccCccchhccccc---
Confidence 999999998543 4899999999999999999999998 9999999999999999999999999987654321
Q ss_pred ccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCCCCCC
Q 005227 534 IVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSY 613 (707)
Q Consensus 534 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 613 (707)
.......++..|+|||.+.+..++.++|||||||++|||++|+.||........... ..... ......
T Consensus 170 ----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~-~~~~~-------~~~~~~ 237 (296)
T cd06655 170 ----SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYL-IATNG-------TPELQN 237 (296)
T ss_pred ----ccCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH-HHhcC-------CcccCC
Confidence 112234578899999999998999999999999999999999999975443211100 00000 000000
Q ss_pred ChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCCCCCCCCCCCCC
Q 005227 614 PSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSSDVSG 693 (707)
Q Consensus 614 ~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f~~~~~~ 693 (707)
+. ...+...+++.+|+..||++|+|+++++.||||..-...
T Consensus 238 ~~---------------------------------------~~~~~~~~li~~~l~~dp~~Rpt~~~il~~~~~~~~~~~ 278 (296)
T cd06655 238 PE---------------------------------------KLSPIFRDFLNRCLEMDVEKRGSAKELLQHPFLKLAKPL 278 (296)
T ss_pred cc---------------------------------------cCCHHHHHHHHHHhhcChhhCCCHHHHhhChHhhhcccc
Confidence 00 111223357778888888888888899999999876654
Q ss_pred CCccc
Q 005227 694 SNLVS 698 (707)
Q Consensus 694 ~~~~~ 698 (707)
+....
T Consensus 279 ~~~~~ 283 (296)
T cd06655 279 SSLTP 283 (296)
T ss_pred ccCCc
Confidence 44433
No 210
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=1e-36 Score=314.78 Aligned_cols=201 Identities=25% Similarity=0.385 Sum_probs=173.7
Q ss_pred hcCCCccceEeeeCceEEEEEEe-CCCcEEEEEEeccCChhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEec
Q 005227 374 TNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 452 (707)
Q Consensus 374 ~~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~ 452 (707)
.++|++.+.||+|+||.||+|.. .+++.||+|++..........+.+|+.++++++|+||+++++++...+..++||||
T Consensus 8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~ 87 (267)
T cd06646 8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEY 87 (267)
T ss_pred hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeC
Confidence 35788999999999999999996 47899999998765444456788999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCC
Q 005227 453 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 532 (707)
Q Consensus 453 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 532 (707)
+++++|.++++.. ..+++..+..++.|++.||+|||+.+ |+||||||+||++++++.+||+|||++.......
T Consensus 88 ~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~-- 160 (267)
T cd06646 88 CGGGSLQDIYHVT--GPLSELQIAYVCRETLQGLAYLHSKG---KMHRDIKGANILLTDNGDVKLADFGVAAKITATI-- 160 (267)
T ss_pred CCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEECCCCCEEECcCccceeecccc--
Confidence 9999999998654 35899999999999999999999998 9999999999999999999999999997653211
Q ss_pred CccccceecccccCCCccchhhhc---cCCCCCchhhHHHHHHHHHHHcCCCCCCCC
Q 005227 533 GIVPAHVSTVVKGTPGYLDPEYFL---THKLTDKSDVYSLGVVFLELLTGMQPISHG 586 (707)
Q Consensus 533 ~~~~~~~~~~~~gt~~y~aPE~~~---~~~~s~~sDVwSlGvll~elltG~~pf~~~ 586 (707)
.......|+..|+|||.+. ...++.++|||||||++|||++|+.||...
T Consensus 161 -----~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~ 212 (267)
T cd06646 161 -----AKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDL 212 (267)
T ss_pred -----cccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCcccc
Confidence 1112345788999999985 355788999999999999999999998643
No 211
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=6.8e-37 Score=316.95 Aligned_cols=204 Identities=30% Similarity=0.456 Sum_probs=174.2
Q ss_pred HHhcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHcc-CCCcceeEEEEEEeC------
Q 005227 372 LATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEE------ 443 (707)
Q Consensus 372 ~~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~------ 443 (707)
.+++.|+..+.||+|+||.||+|... +++.||+|++.... .....+.+|+.+++++ +|+||+++++++...
T Consensus 3 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~ 81 (272)
T cd06637 3 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMD 81 (272)
T ss_pred ChhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC-ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCC
Confidence 35678889999999999999999965 68899999986543 3456788999999998 799999999998653
Q ss_pred CeEEEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeeccc
Q 005227 444 GEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLS 523 (707)
Q Consensus 444 ~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla 523 (707)
...++||||+++++|.+++.......+++..+..++.|++.||+|||+.+ |+|+||||+||++++++.+||+|||++
T Consensus 82 ~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~---ivh~dl~~~nili~~~~~~~l~Dfg~~ 158 (272)
T cd06637 82 DQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHK---VIHRDIKGQNVLLTENAEVKLVDFGVS 158 (272)
T ss_pred cEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCCHHHEEECCCCCEEEccCCCc
Confidence 46899999999999999998755567899999999999999999999998 999999999999999999999999999
Q ss_pred ccCCCCCCCCccccceecccccCCCccchhhhc-----cCCCCCchhhHHHHHHHHHHHcCCCCCCCC
Q 005227 524 RLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFL-----THKLTDKSDVYSLGVVFLELLTGMQPISHG 586 (707)
Q Consensus 524 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~s~~sDVwSlGvll~elltG~~pf~~~ 586 (707)
....... .......|+..|+|||++. ...++.++|||||||++|||++|+.||...
T Consensus 159 ~~~~~~~-------~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~ 219 (272)
T cd06637 159 AQLDRTV-------GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDM 219 (272)
T ss_pred eeccccc-------ccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCcccc
Confidence 7653211 1223456889999999986 346888999999999999999999999643
No 212
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=1.3e-36 Score=314.76 Aligned_cols=255 Identities=27% Similarity=0.427 Sum_probs=200.4
Q ss_pred CCccceEeeeCceEEEEEEeCC-Cc--EEEEEEeccCC--hhhHHHHHHHHHHHHccCCCcceeEEEEEEeC------Ce
Q 005227 377 FNSSTQIGQGGYGKVYKGILPD-GT--VVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE------GE 445 (707)
Q Consensus 377 ~~~~~~lG~G~fg~Vy~~~~~~-~~--~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~------~~ 445 (707)
|.+.+.||+|+||.||+|.+.+ +. .||+|.++... ....+.+.+|+++++.++|+||+++++++... ..
T Consensus 1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 80 (272)
T cd05075 1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPS 80 (272)
T ss_pred CccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCC
Confidence 3467889999999999999753 33 68999886532 33356788999999999999999999987432 24
Q ss_pred EEEEEecCCCCCHHHHHhhc----CCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeec
Q 005227 446 QMLVYEFMSNGTLRDQLSAK----SKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFG 521 (707)
Q Consensus 446 ~~lV~E~~~~gsL~~~l~~~----~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFG 521 (707)
.++||||+++|+|.+++... ....+++..+..++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||
T Consensus 81 ~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg 157 (272)
T cd05075 81 PVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKS---FIHRDLAARNCMLNENMNVCVADFG 157 (272)
T ss_pred cEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCC---eeccccchhheEEcCCCCEEECCCC
Confidence 68999999999999987432 2345899999999999999999999988 9999999999999999999999999
Q ss_pred ccccCCCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHhhcc
Q 005227 522 LSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSS 600 (707)
Q Consensus 522 la~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~ellt-G~~pf~~~~~~~~~~~~~~~~~ 600 (707)
+++....... ........+++.|+|||+..+..++.++|||||||++|||++ |+.||..... .+.....
T Consensus 158 ~~~~~~~~~~-----~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~-~~~~~~~---- 227 (272)
T cd05075 158 LSKKIYNGDY-----YRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVEN-SEIYDYL---- 227 (272)
T ss_pred cccccCcccc-----eecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCH-HHHHHHH----
Confidence 9987543221 011122345678999999999999999999999999999999 7888864332 1111111
Q ss_pred cchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 005227 601 MMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 649 (707)
Q Consensus 601 ~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~ 649 (707)
..+.....+..++..+.+++.+||+.+|++||++.++++.|+.+
T Consensus 228 -----~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 228 -----RQGNRLKQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred -----HcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 11122223445667789999999999999999999999998764
No 213
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=3.6e-37 Score=325.54 Aligned_cols=287 Identities=25% Similarity=0.346 Sum_probs=207.4
Q ss_pred hcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCChhh--HHHHHHHHHHHHccCCCcceeEEEEEEeC--CeEEE
Q 005227 374 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQG--EKEFLTEIQFLSRLHHRNLVSLVGYCDEE--GEQML 448 (707)
Q Consensus 374 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~--~~~~~~E~~~l~~l~h~nIv~l~~~~~~~--~~~~l 448 (707)
.++|++.+.||+|+||.||+|... +|+.||+|.+....... ...+.+|+.++++++|+||+++++++... +..++
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFL 85 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEE
Confidence 467899999999999999999975 68999999986533221 23567899999999999999999998655 56899
Q ss_pred EEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCC
Q 005227 449 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 528 (707)
Q Consensus 449 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~ 528 (707)
||||++ ++|.+++.... ..+++..++.++.|+++||+|||+.+ ++||||||+||++++++.+||+|||++.....
T Consensus 86 v~e~~~-~~l~~~l~~~~-~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~ 160 (309)
T cd07845 86 VMEYCE-QDLASLLDNMP-TPFSESQVKCLMLQLLRGLQYLHENF---IIHRDLKVSNLLLTDKGCLKIADFGLARTYGL 160 (309)
T ss_pred EEecCC-CCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEECccceeeecCC
Confidence 999996 58988886543 56899999999999999999999999 99999999999999999999999999986643
Q ss_pred CCCCCccccceecccccCCCccchhhhcc-CCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhcc
Q 005227 529 PDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVID 607 (707)
Q Consensus 529 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 607 (707)
.. .......++..|+|||.+.+ ..++.++||||+||++|||++|+.||...... +.+......
T Consensus 161 ~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~-~~~~~~~~~-------- 224 (309)
T cd07845 161 PA-------KPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEI-EQLDLIIQL-------- 224 (309)
T ss_pred cc-------CCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHh--------
Confidence 21 11122345778999999876 56889999999999999999999999754432 111111100
Q ss_pred CCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCCCCCCC
Q 005227 608 GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYV 687 (707)
Q Consensus 608 ~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f 687 (707)
.+.........+..+........+.... ..+...+...++...+||.+||.+||++|||++|+|+||||
T Consensus 225 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h~~f 293 (309)
T cd07845 225 --LGTPNESIWPGFSDLPLVGKFTLPKQPY---------NNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALESSYF 293 (309)
T ss_pred --cCCCChhhchhhhcccccccccccCCCC---------CchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcChhh
Confidence 0000011111111110000000000000 00111122234556789999999999999999999999999
Q ss_pred CCCCC
Q 005227 688 SSDVS 692 (707)
Q Consensus 688 ~~~~~ 692 (707)
.....
T Consensus 294 ~~~~~ 298 (309)
T cd07845 294 KEKPL 298 (309)
T ss_pred ccCCC
Confidence 86554
No 214
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=1.4e-36 Score=319.90 Aligned_cols=260 Identities=24% Similarity=0.399 Sum_probs=208.4
Q ss_pred HhcCCCccceEeeeCceEEEEEEeC------CCcEEEEEEeccCCh-hhHHHHHHHHHHHHcc-CCCcceeEEEEEEeCC
Q 005227 373 ATNNFNSSTQIGQGGYGKVYKGILP------DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEG 444 (707)
Q Consensus 373 ~~~~~~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~ 444 (707)
..++|...+.||+|+||.||+|... ++..||||++..... ...+.+.+|+++++++ +|+||+++++++...+
T Consensus 33 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 112 (302)
T cd05055 33 PRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGG 112 (302)
T ss_pred cHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCC
Confidence 3457888999999999999999741 355799998875432 3345789999999999 7999999999999999
Q ss_pred eEEEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccc
Q 005227 445 EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSR 524 (707)
Q Consensus 445 ~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~ 524 (707)
..++||||+++|+|.++++......+++..+..++.|++.||+|||+.+ |+|+||||+|||++.++.+|++|||+++
T Consensus 113 ~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~~l~dfg~~~ 189 (302)
T cd05055 113 PILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNVLLTHGKIVKICDFGLAR 189 (302)
T ss_pred ceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eehhhhccceEEEcCCCeEEECCCcccc
Confidence 9999999999999999997655555899999999999999999999998 9999999999999999999999999997
Q ss_pred cCCCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHhhcccch
Q 005227 525 LAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMF 603 (707)
Q Consensus 525 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~ 603 (707)
....... ........++..|+|||.+.+..++.++|||||||++|||++ |..||............ ..
T Consensus 190 ~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~~~-~~----- 258 (302)
T cd05055 190 DIMNDSN-----YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKL-IK----- 258 (302)
T ss_pred cccCCCc-----eeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHHHH-HH-----
Confidence 6543210 011122345778999999999999999999999999999998 99998654332111111 11
Q ss_pred hhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 005227 604 SVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 649 (707)
Q Consensus 604 ~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~ 649 (707)
.+.....+...+..+.+++.+|++.+|++||++.++++.|++.
T Consensus 259 ---~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 259 ---EGYRMAQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred ---cCCcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence 1111122334457899999999999999999999999998763
No 215
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=1.3e-36 Score=320.39 Aligned_cols=287 Identities=26% Similarity=0.411 Sum_probs=225.5
Q ss_pred hcCCCccceEeeeCceEEEEEEeC-CCc----EEEEEEeccCCh-hhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEE
Q 005227 374 TNNFNSSTQIGQGGYGKVYKGILP-DGT----VVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQM 447 (707)
Q Consensus 374 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~----~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~ 447 (707)
.++|+..+.||+|+||.||+|.+. ++. .||+|.+..... ....++.+|+.+++.++|+||+++++++... ..+
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~ 84 (303)
T cd05110 6 ETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQ 84 (303)
T ss_pred hhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Cce
Confidence 456778899999999999999863 444 578998875433 2234788999999999999999999998654 567
Q ss_pred EEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCC
Q 005227 448 LVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAP 527 (707)
Q Consensus 448 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~ 527 (707)
+|+||+++|+|.+++.... ..+++..++.++.|++.||+|||+.+ |+||||||+||++++++.+||+|||+++...
T Consensus 85 ~v~e~~~~g~l~~~~~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~---ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~ 160 (303)
T cd05110 85 LVTQLMPHGCLLDYVHEHK-DNIGSQLLLNWCVQIAKGMMYLEERR---LVHRDLAARNVLVKSPNHVKITDFGLARLLE 160 (303)
T ss_pred eeehhcCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHhhcC---eeccccccceeeecCCCceEEcccccccccc
Confidence 9999999999999987543 35889999999999999999999998 9999999999999999999999999998654
Q ss_pred CCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHhhcccchhhc
Q 005227 528 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVI 606 (707)
Q Consensus 528 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~ 606 (707)
.... ........++..|+|||++.+..++.++|||||||++|||++ |..||..... ........
T Consensus 161 ~~~~-----~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~--~~~~~~~~-------- 225 (303)
T cd05110 161 GDEK-----EYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPT--REIPDLLE-------- 225 (303)
T ss_pred Cccc-----ccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHHH--------
Confidence 2211 111122345678999999999999999999999999999998 8899864322 11111111
Q ss_pred cCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCCCCCC
Q 005227 607 DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPY 686 (707)
Q Consensus 607 ~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hp~ 686 (707)
.+.....+..++..+.+++..||..+|++||++.++++.++.+.... .+.+.+.++.|+.+...-.|||
T Consensus 226 ~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~ 294 (303)
T cd05110 226 KGERLPQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMARDP-----------QRYLVIQGDDRMKLPSPNDSKF 294 (303)
T ss_pred CCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhch-----------hhheeeccCCcCCCCCCchhhH
Confidence 11112223445677899999999999999999999999998764421 2347788999999999999999
Q ss_pred CCCCC
Q 005227 687 VSSDV 691 (707)
Q Consensus 687 f~~~~ 691 (707)
|..-+
T Consensus 295 ~~~~~ 299 (303)
T cd05110 295 FQNLL 299 (303)
T ss_pred Hhccc
Confidence 97643
No 216
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=6e-37 Score=324.87 Aligned_cols=268 Identities=23% Similarity=0.310 Sum_probs=208.9
Q ss_pred cCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCChh---hHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEE
Q 005227 375 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ---GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 450 (707)
Q Consensus 375 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~---~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~ 450 (707)
++|+..+.||+|+||+||+|... +++.||+|.+...... ..+.+.+|+++++.++|+||+++++.+...+..++||
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 80 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVM 80 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEE
Confidence 36888999999999999999975 5899999998764332 3457889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCC
Q 005227 451 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 530 (707)
Q Consensus 451 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~ 530 (707)
||+.+++|.+++.......+++..++.++.|+++||+|||+.+ ++|+||||+||+++.++.++|+|||++.......
T Consensus 81 e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~ 157 (316)
T cd05574 81 DYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLG---IVYRDLKPENILLHESGHIMLSDFDLSKQSDVEP 157 (316)
T ss_pred EecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCC---eeccCCChHHeEEcCCCCEEEeecchhhcccccc
Confidence 9999999999997665567999999999999999999999998 9999999999999999999999999987653221
Q ss_pred CCCc----------------------cccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCch
Q 005227 531 IEGI----------------------VPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKN 588 (707)
Q Consensus 531 ~~~~----------------------~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~~~ 588 (707)
.... ..........|+..|+|||++.+..++.++||||||+++|+|++|+.||.....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~ 237 (316)
T cd05574 158 PPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNR 237 (316)
T ss_pred cccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCch
Confidence 0000 000111234678899999999999999999999999999999999999964332
Q ss_pred hHHHHHHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCC
Q 005227 589 IVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEH 668 (707)
Q Consensus 589 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L 668 (707)
.... .++. ...+ ..|.. ...+....+++.+|+
T Consensus 238 ~~~~-----------------------------~~~~----~~~~-~~~~~--------------~~~~~~~~~li~~~l 269 (316)
T cd05574 238 DETF-----------------------------SNIL----KKEV-TFPGS--------------PPVSSSARDLIRKLL 269 (316)
T ss_pred HHHH-----------------------------HHHh----cCCc-cCCCc--------------cccCHHHHHHHHHHc
Confidence 1110 0000 0000 00000 001223446788888
Q ss_pred CCCCCCCCC----CCcCCCCCCCCCCCCC
Q 005227 669 TSKEETPPS----SSSMLKHPYVSSDVSG 693 (707)
Q Consensus 669 ~~dP~~R~s----a~e~L~Hp~f~~~~~~ 693 (707)
..||++|+| ++|+|+||||.+..+.
T Consensus 270 ~~~p~~R~s~~~~~~~ll~~~~~~~~~~~ 298 (316)
T cd05574 270 VKDPSKRLGSKRGAAEIKQHPFFRGVNWA 298 (316)
T ss_pred cCCHhHCCCchhhHHHHHcCchhhcCChh
Confidence 888999999 9999999999886553
No 217
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=7.1e-38 Score=326.82 Aligned_cols=280 Identities=26% Similarity=0.366 Sum_probs=207.2
Q ss_pred cCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCChh--hHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEe
Q 005227 375 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ--GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 451 (707)
Q Consensus 375 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~--~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E 451 (707)
++|+..+.||+|+||.||+|..+ +++.||+|++...... ..+.+.+|+++++.++|+||+++++++..++..++|||
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFE 80 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEe
Confidence 46888999999999999999976 5899999987653222 34578899999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCC
Q 005227 452 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 531 (707)
Q Consensus 452 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 531 (707)
|+++++|.++.... ..+++..++.++.|+++||+|||+.+ ++|+||+|+||++++++.++|+|||++.......
T Consensus 81 ~~~~~~l~~~~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~~---i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~- 154 (286)
T cd07846 81 FVDHTVLDDLEKYP--NGLDESRVRKYLFQILRGIEFCHSHN---IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG- 154 (286)
T ss_pred cCCccHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEECCCCcEEEEeeeeeeeccCCc-
Confidence 99998888877543 34899999999999999999999998 9999999999999999999999999987654321
Q ss_pred CCccccceecccccCCCccchhhhcc-CCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCCC
Q 005227 532 EGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 610 (707)
Q Consensus 532 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 610 (707)
.......++..|+|||++.+ ..++.++|||||||++|||++|+.||..................
T Consensus 155 ------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~--------- 219 (286)
T cd07846 155 ------EVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGN--------- 219 (286)
T ss_pred ------cccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCC---------
Confidence 11223457889999999876 45788999999999999999999888654432211111100000
Q ss_pred CCCChHHHHHH--HHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCCCCCCC
Q 005227 611 GSYPSECVEKF--IKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYV 687 (707)
Q Consensus 611 ~~~~~~~~~~l--~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f 687 (707)
........+ ..+..... .|... + ........+.......+|+.+|+..+|++||+++++++||||
T Consensus 220 --~~~~~~~~~~~~~~~~~~~--~~~~~----~----~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~ 286 (286)
T cd07846 220 --LIPRHQEIFQKNPLFAGMR--LPEVK----E----IEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHHEFF 286 (286)
T ss_pred --CchhhHHHhccchHhhccc--ccccc----C----cchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcCCCC
Confidence 000000000 00000011 11100 0 001112234445566789999999999999999999999998
No 218
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=1.7e-36 Score=313.06 Aligned_cols=257 Identities=23% Similarity=0.368 Sum_probs=209.5
Q ss_pred cCCCccceEeeeCceEEEEEEe-CCCcEEEEEEeccCC---hhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEE
Q 005227 375 NNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 450 (707)
Q Consensus 375 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~ 450 (707)
++|+..+.||+|+||.||+|.. .+++.||||.+.... .....++.+|+++++.++|+||+++++++...+..++||
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 81 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence 4688889999999999999995 489999999876432 223457889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhc--CCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCC
Q 005227 451 EFMSNGTLRDQLSAK--SKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 528 (707)
Q Consensus 451 E~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~ 528 (707)
||+++++|.+++... ....+++..++.++.|+++||+|||+.+ ++|+||||+||+++.++.++|+|||++.....
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd08229 82 ELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRR---VMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCCEEECcchhhhcccc
Confidence 999999999998642 2346899999999999999999999998 99999999999999999999999999876542
Q ss_pred CCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccC
Q 005227 529 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDG 608 (707)
Q Consensus 529 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 608 (707)
.. .......|+..|+|||.+.+..++.++||||||+++|||++|..||............ .+...
T Consensus 159 ~~-------~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~--------~~~~~ 223 (267)
T cd08229 159 KT-------TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCK--------KIEQC 223 (267)
T ss_pred CC-------cccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHHHHhh--------hhhcC
Confidence 21 1112345788999999999989999999999999999999999999643321111111 11111
Q ss_pred CCCC-CChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 005227 609 NMGS-YPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 649 (707)
Q Consensus 609 ~~~~-~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~ 649 (707)
.... .+...+..+.+++.+||+.+|++|||+.++++.++++
T Consensus 224 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~ 265 (267)
T cd08229 224 DYPPLPSDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRM 265 (267)
T ss_pred CCCCCCcccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhh
Confidence 1122 2345677899999999999999999999999988764
No 219
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=1.6e-36 Score=313.60 Aligned_cols=258 Identities=28% Similarity=0.457 Sum_probs=206.7
Q ss_pred hcCCCccceEeeeCceEEEEEEeC-C---CcEEEEEEeccCC-hhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEE
Q 005227 374 TNNFNSSTQIGQGGYGKVYKGILP-D---GTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 448 (707)
Q Consensus 374 ~~~~~~~~~lG~G~fg~Vy~~~~~-~---~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~l 448 (707)
.++|++.+.||+|+||.||+|... + +..||+|.+.... ....+.+.+|+.++++++||||+++++++...+..++
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 82 (267)
T cd05066 3 ASCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMI 82 (267)
T ss_pred HHHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEE
Confidence 357888999999999999999863 2 3479999987543 2334678999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCC
Q 005227 449 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 528 (707)
Q Consensus 449 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~ 528 (707)
||||+++++|.+++.... ..+++..++.++.|++.||+|||+.+ ++||||||+||+++.++.++++|||++.....
T Consensus 83 v~e~~~~~~L~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~---i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd05066 83 VTEYMENGSLDAFLRKHD-GQFTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILVNSNLVCKVSDFGLSRVLED 158 (267)
T ss_pred EEEcCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCC---EeehhhchhcEEECCCCeEEeCCCCccccccc
Confidence 999999999999997653 35899999999999999999999998 99999999999999999999999999987643
Q ss_pred CCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHhhcccchhhcc
Q 005227 529 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVID 607 (707)
Q Consensus 529 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 607 (707)
.... ........++..|+|||++.+..++.++|||||||++||+++ |..||...... +..... .+
T Consensus 159 ~~~~----~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~-~~~~~~---------~~ 224 (267)
T cd05066 159 DPEA----AYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQ-DVIKAI---------EE 224 (267)
T ss_pred ccce----eeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHH-HHHHHH---------hC
Confidence 2210 011112223568999999999899999999999999999887 99999654321 111111 11
Q ss_pred CCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 005227 608 GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 649 (707)
Q Consensus 608 ~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~ 649 (707)
....+.+..++..+.+++.+|++.+|.+||++.++++.|+++
T Consensus 225 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 225 GYRLPAPMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKL 266 (267)
T ss_pred CCcCCCCCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence 111223345567889999999999999999999999998764
No 220
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=8.6e-37 Score=321.75 Aligned_cols=258 Identities=29% Similarity=0.468 Sum_probs=204.9
Q ss_pred hcCCCccceEeeeCceEEEEEEeC-CCc--EEEEEEeccCC-hhhHHHHHHHHHHHHcc-CCCcceeEEEEEEeCCeEEE
Q 005227 374 TNNFNSSTQIGQGGYGKVYKGILP-DGT--VVAVKRAQEGS-LQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQML 448 (707)
Q Consensus 374 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~--~vavK~l~~~~-~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~l 448 (707)
.++|++.+.||+|+||.||+|.++ ++. .+|+|.+.... ......+.+|++++.++ +|+||+++++++...+..++
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~l 85 (303)
T cd05088 6 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYL 85 (303)
T ss_pred hhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceE
Confidence 357888999999999999999964 454 46888776532 23346788999999999 89999999999999999999
Q ss_pred EEecCCCCCHHHHHhhcC--------------CCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCc
Q 005227 449 VYEFMSNGTLRDQLSAKS--------------KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFT 514 (707)
Q Consensus 449 V~E~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~ 514 (707)
||||+++++|.++++... ...+++..++.++.|++.||+|||+.+ |+||||||+|||+++++.
T Consensus 86 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~g---i~H~dlkp~Nili~~~~~ 162 (303)
T cd05088 86 AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRDLAARNILVGENYV 162 (303)
T ss_pred EEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCC---ccccccchheEEecCCCc
Confidence 999999999999997542 235789999999999999999999998 999999999999999999
Q ss_pred EEEeeecccccCCCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc-CCCCCCCCchhHHHH
Q 005227 515 AKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREV 593 (707)
Q Consensus 515 ~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~ellt-G~~pf~~~~~~~~~~ 593 (707)
+||+|||+++..... .......++..|+|||++.+..++.++|||||||++|||+| |..||...... +..
T Consensus 163 ~kl~dfg~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~-~~~ 233 (303)
T cd05088 163 AKIADFGLSRGQEVY--------VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA-ELY 233 (303)
T ss_pred EEeCccccCcccchh--------hhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChH-HHH
Confidence 999999998642210 01111224567999999988889999999999999999998 99998643321 111
Q ss_pred HHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhc
Q 005227 594 NIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNM 652 (707)
Q Consensus 594 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~ 652 (707)
... ........+...+..+.+++.+||+.+|++||++.++++.++.+...
T Consensus 234 ~~~---------~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~~ 283 (303)
T cd05088 234 EKL---------PQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEE 283 (303)
T ss_pred HHH---------hcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 111 11111123334556789999999999999999999999999877653
No 221
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=2.5e-36 Score=317.14 Aligned_cols=200 Identities=25% Similarity=0.426 Sum_probs=176.2
Q ss_pred cCCCccceEeeeCceEEEEEEe-CCCcEEEEEEeccCChhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEecC
Q 005227 375 NNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 453 (707)
Q Consensus 375 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~ 453 (707)
.+|+..+.||+|+||.||+|.. .+++.||+|.+........+.+.+|+.+++.++|+||+++++++......++||||+
T Consensus 20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~~ 99 (296)
T cd06654 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL 99 (296)
T ss_pred cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeeccc
Confidence 5788899999999999999996 478999999987755555677899999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCCC
Q 005227 454 SNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEG 533 (707)
Q Consensus 454 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 533 (707)
++++|.+++... .+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 100 ~~~~L~~~~~~~---~~~~~~~~~i~~ql~~aL~~LH~~g---i~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~--- 170 (296)
T cd06654 100 AGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ--- 170 (296)
T ss_pred CCCCHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEcCCCCEEECccccchhccccc---
Confidence 999999998543 4789999999999999999999998 9999999999999999999999999987643221
Q ss_pred ccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCc
Q 005227 534 IVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 587 (707)
Q Consensus 534 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~~ 587 (707)
.......|++.|+|||.+.+..++.++|||||||++|||++|+.||....
T Consensus 171 ----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~ 220 (296)
T cd06654 171 ----SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNEN 220 (296)
T ss_pred ----cccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCC
Confidence 11223457889999999999889999999999999999999999996543
No 222
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=2.3e-36 Score=346.89 Aligned_cols=270 Identities=25% Similarity=0.353 Sum_probs=209.2
Q ss_pred cCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCCh---hhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEE
Q 005227 375 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 450 (707)
Q Consensus 375 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~ 450 (707)
++|++.++||+|+||.||+|... +++.||||++..... ...+++.+|++++++++||||+++++++.+.+..++||
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM 81 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM 81 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence 57899999999999999999965 689999999875322 23467899999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcC---------CCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeec
Q 005227 451 EFMSNGTLRDQLSAKS---------KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFG 521 (707)
Q Consensus 451 E~~~~gsL~~~l~~~~---------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFG 521 (707)
||+++|+|.+++.... ....++..++.++.||++||+|||+.+ |+||||||+||+++.++.+||+|||
T Consensus 82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~G---IIHRDLKPeNILLd~dg~vKLiDFG 158 (932)
T PRK13184 82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKG---VLHRDLKPDNILLGLFGEVVILDWG 158 (932)
T ss_pred EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCC---ccccCCchheEEEcCCCCEEEEecC
Confidence 9999999999986421 234567788999999999999999998 9999999999999999999999999
Q ss_pred ccccCCCCCCCC-----------ccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhH
Q 005227 522 LSRLAPVPDIEG-----------IVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIV 590 (707)
Q Consensus 522 la~~~~~~~~~~-----------~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~ 590 (707)
+++......... ...........||+.|+|||++.+..++.++|||||||++|||+||+.||.......
T Consensus 159 LAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~k 238 (932)
T PRK13184 159 AAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRK 238 (932)
T ss_pred cceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhh
Confidence 998652211000 000011123569999999999999999999999999999999999999996532211
Q ss_pred HHHHHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCC-CHHHHHHHHHHhhhcCCC
Q 005227 591 REVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARP-SMSEVMRELESIWNMMPE 655 (707)
Q Consensus 591 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RP-t~~~v~~~L~~~~~~~~~ 655 (707)
.... . ....+.......+.+..+.+++.+|++.+|++|+ ++.++.+.|+......+.
T Consensus 239 i~~~-----~---~i~~P~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~lq~~p~ 296 (932)
T PRK13184 239 ISYR-----D---VILSPIEVAPYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHLQGSPE 296 (932)
T ss_pred hhhh-----h---hccChhhccccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhcCcc
Confidence 0000 0 0000000011134556788999999999999996 667788888877665443
No 223
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=1e-36 Score=318.73 Aligned_cols=257 Identities=32% Similarity=0.504 Sum_probs=207.2
Q ss_pred HhcCCCccceEeeeCceEEEEEEeC------CCcEEEEEEeccCCh-hhHHHHHHHHHHHHccCCCcceeEEEEEEeCCe
Q 005227 373 ATNNFNSSTQIGQGGYGKVYKGILP------DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGE 445 (707)
Q Consensus 373 ~~~~~~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~ 445 (707)
..++|+..+.||+|+||.||+|..+ ++..||+|.+..... ...+++.+|+.++++++||||+++++++.....
T Consensus 3 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~ 82 (288)
T cd05050 3 PRNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKP 82 (288)
T ss_pred ChHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCc
Confidence 3567889999999999999999863 467899999875432 334678999999999999999999999999999
Q ss_pred EEEEEecCCCCCHHHHHhhcC--------------------CCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCC
Q 005227 446 QMLVYEFMSNGTLRDQLSAKS--------------------KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKAS 505 (707)
Q Consensus 446 ~~lV~E~~~~gsL~~~l~~~~--------------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~ 505 (707)
.++||||+++|+|.+++.... ...+++..++.++.|++.||+|||+.+ ++||||||+
T Consensus 83 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~---i~H~dl~p~ 159 (288)
T cd05050 83 MCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERK---FVHRDLATR 159 (288)
T ss_pred cEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCC---eecccccHh
Confidence 999999999999999997432 134788899999999999999999998 999999999
Q ss_pred CEEEcCCCcEEEeeecccccCCCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc-CCCCCC
Q 005227 506 NILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPIS 584 (707)
Q Consensus 506 NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~ellt-G~~pf~ 584 (707)
||++++++.+||+|||+++........ ........+..|+|||.+.+..++.++|||||||++|||++ |..||.
T Consensus 160 nil~~~~~~~~l~dfg~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~ 234 (288)
T cd05050 160 NCLVGENMVVKIADFGLSRNIYSADYY-----KASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYY 234 (288)
T ss_pred heEecCCCceEECccccceecccCccc-----cccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCC
Confidence 999999999999999998754322110 11112234567999999999999999999999999999998 888886
Q ss_pred CCchhHHHHHHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 005227 585 HGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELE 647 (707)
Q Consensus 585 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~ 647 (707)
.... .+... .+.++.....+..++.++.+++.+|++.+|++||++.|+++.|+
T Consensus 235 ~~~~-~~~~~---------~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~ 287 (288)
T cd05050 235 GMAH-EEVIY---------YVRDGNVLSCPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQ 287 (288)
T ss_pred CCCH-HHHHH---------HHhcCCCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhh
Confidence 4332 11111 11122222344556788999999999999999999999999886
No 224
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=3.6e-37 Score=322.85 Aligned_cols=259 Identities=23% Similarity=0.362 Sum_probs=203.8
Q ss_pred CCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEecCCC
Q 005227 377 FNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSN 455 (707)
Q Consensus 377 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~ 455 (707)
|.....||+|+||.||++... ++..||||.+........+.+.+|+.+++.++|+||+++++.+...+..++||||+++
T Consensus 24 ~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~ 103 (292)
T cd06658 24 LDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEG 103 (292)
T ss_pred HhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCC
Confidence 344567999999999999964 6899999998765555566789999999999999999999999999999999999999
Q ss_pred CCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCCCcc
Q 005227 456 GTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIV 535 (707)
Q Consensus 456 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 535 (707)
++|.+++... .+++..+..++.||+.||+|||+.+ |+||||||+||++++++.+||+|||++.......
T Consensus 104 ~~L~~~~~~~---~l~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~----- 172 (292)
T cd06658 104 GALTDIVTHT---RMNEEQIATVCLSVLRALSYLHNQG---VIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEV----- 172 (292)
T ss_pred CcHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEcCCCCEEEccCcchhhccccc-----
Confidence 9999988542 4889999999999999999999998 9999999999999999999999999987543211
Q ss_pred ccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCCCCCCCh
Q 005227 536 PAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPS 615 (707)
Q Consensus 536 ~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 615 (707)
.......|+..|+|||.+.+..++.++||||||+++|||++|+.||........ .
T Consensus 173 --~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~-~---------------------- 227 (292)
T cd06658 173 --PKRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQA-M---------------------- 227 (292)
T ss_pred --ccCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-H----------------------
Confidence 112234578999999999988999999999999999999999999864332100 0
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCCCCCCCCCCCCCCC
Q 005227 616 ECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSSDVSGSN 695 (707)
Q Consensus 616 ~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f~~~~~~~~ 695 (707)
..+........... ...+....+|+.+|+..||++|||++|+++||||......+-
T Consensus 228 -------~~~~~~~~~~~~~~-----------------~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~~~~~~~~~ 283 (292)
T cd06658 228 -------RRIRDNLPPRVKDS-----------------HKVSSVLRGFLDLMLVREPSQRATAQELLQHPFLKLAGPPSC 283 (292)
T ss_pred -------HHHHhcCCCccccc-----------------cccCHHHHHHHHHHccCChhHCcCHHHHhhChhhhccCCccc
Confidence 00111111100000 011122335778889999999999999999999987666553
No 225
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=7.4e-37 Score=315.43 Aligned_cols=263 Identities=26% Similarity=0.362 Sum_probs=205.5
Q ss_pred cCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCC-hhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEec
Q 005227 375 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 452 (707)
Q Consensus 375 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~ 452 (707)
++|+..+.||.|+||+||+|... ++..+|+|++.... ....+.+.+|+++++.++|+||+++++.+...+..++||||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~ 80 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPY 80 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEec
Confidence 47889999999999999999964 68899999987533 23456789999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCC-CCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCC
Q 005227 453 MSNGTLRDQLSAKSK-EPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 531 (707)
Q Consensus 453 ~~~gsL~~~l~~~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 531 (707)
+++++|.+++..... ..+++..+..++.|++.||+|||+.+ ++|+||||+||++++++.++|+|||++........
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~---i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~ 157 (267)
T cd06610 81 LSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNG---QIHRDIKAGNILLGEDGSVKIADFGVSASLADGGD 157 (267)
T ss_pred cCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHhEEEcCCCCEEEcccchHHHhccCcc
Confidence 999999999976433 56899999999999999999999998 99999999999999999999999999976654321
Q ss_pred CCccccceecccccCCCccchhhhccC-CCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCCC
Q 005227 532 EGIVPAHVSTVVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 610 (707)
Q Consensus 532 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 610 (707)
.. ........|+..|+|||++... .++.++|||||||++|||++|+.||........ .
T Consensus 158 ~~---~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~-~----------------- 216 (267)
T cd06610 158 RT---RKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKV-L----------------- 216 (267)
T ss_pred cc---ccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhh-H-----------------
Confidence 10 0122344688999999999876 789999999999999999999999964332110 0
Q ss_pred CCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCCCCCCC
Q 005227 611 GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYV 687 (707)
Q Consensus 611 ~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f 687 (707)
.+.. +..+..-+.... .........+++.+|+..||++|||++|+++||||
T Consensus 217 -----------~~~~----~~~~~~~~~~~~-----------~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~p~~ 267 (267)
T cd06610 217 -----------MLTL----QNDPPSLETGAD-----------YKKYSKSFRKMISLCLQKDPSKRPTAEELLKHKFF 267 (267)
T ss_pred -----------HHHh----cCCCCCcCCccc-----------cccccHHHHHHHHHHcCCChhhCcCHHHHhhCCCC
Confidence 0000 001100000000 01112233478888999999999999999999997
No 226
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=2.2e-36 Score=312.98 Aligned_cols=257 Identities=27% Similarity=0.431 Sum_probs=208.0
Q ss_pred hcCCCccceEeeeCceEEEEEEeCC----CcEEEEEEeccCC-hhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEE
Q 005227 374 TNNFNSSTQIGQGGYGKVYKGILPD----GTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 448 (707)
Q Consensus 374 ~~~~~~~~~lG~G~fg~Vy~~~~~~----~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~l 448 (707)
.++|+..+.||+|+||.||+|.+.+ ...||||...... ....+.+.+|+.++++++|+||+++++++.+ ...++
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~l 83 (270)
T cd05056 5 REDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWI 83 (270)
T ss_pred hhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcEE
Confidence 4568889999999999999998643 3479999887654 3445689999999999999999999999875 45789
Q ss_pred EEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCC
Q 005227 449 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 528 (707)
Q Consensus 449 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~ 528 (707)
||||+++|+|.+++.... ..+++..++.++.|++.||+|||+.+ ++|+||||+||+++.++.+||+|||+++....
T Consensus 84 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~---~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~ 159 (270)
T cd05056 84 VMELAPLGELRSYLQVNK-YSLDLASLILYSYQLSTALAYLESKR---FVHRDIAARNVLVSSPDCVKLGDFGLSRYLED 159 (270)
T ss_pred EEEcCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCC---eeccccChheEEEecCCCeEEccCceeeeccc
Confidence 999999999999997643 35899999999999999999999998 99999999999999999999999999976543
Q ss_pred CCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHhhcccchhhcc
Q 005227 529 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVID 607 (707)
Q Consensus 529 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 607 (707)
... .......++..|+|||.+....++.++|||||||++||+++ |..||......... .. +..
T Consensus 160 ~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~-~~---------~~~ 223 (270)
T cd05056 160 ESY------YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVI-GR---------IEN 223 (270)
T ss_pred ccc------eecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHH-HH---------HHc
Confidence 211 11112234568999999988899999999999999999996 99999755432111 11 111
Q ss_pred CCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 005227 608 GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 651 (707)
Q Consensus 608 ~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~ 651 (707)
+.....+..++..+.+++.+|+..+|++||++.++++.|+.+.+
T Consensus 224 ~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~ 267 (270)
T cd05056 224 GERLPMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDILQ 267 (270)
T ss_pred CCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 12223455667789999999999999999999999999998764
No 227
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=1e-36 Score=319.06 Aligned_cols=198 Identities=26% Similarity=0.438 Sum_probs=174.8
Q ss_pred cCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCCh---hhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEE
Q 005227 375 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 450 (707)
Q Consensus 375 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~ 450 (707)
++|+..+.||+|+||.||++... +++.||+|.+..... ...+.+.+|++++++++||||+++++++...+..++||
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 80 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM 80 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence 46888999999999999999965 689999999865322 23456889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCC
Q 005227 451 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 530 (707)
Q Consensus 451 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~ 530 (707)
||+++++|.+++... ..+++..+..++.|++.||.|||+.+ |+|+||+|+||++++++.+||+|||++......
T Consensus 81 e~~~~~~L~~~~~~~--~~l~~~~~~~~~~qil~~l~~lH~~~---i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~- 154 (290)
T cd05580 81 EYVPGGELFSHLRKS--GRFPEPVARFYAAQVVLALEYLHSLD---IVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR- 154 (290)
T ss_pred ecCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEECCCCCEEEeeCCCccccCCC-
Confidence 999999999999664 45899999999999999999999998 999999999999999999999999998765322
Q ss_pred CCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCc
Q 005227 531 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 587 (707)
Q Consensus 531 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~~ 587 (707)
.....|++.|+|||.+.+..++.++||||||+++|||++|+.||....
T Consensus 155 ---------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~ 202 (290)
T cd05580 155 ---------TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDN 202 (290)
T ss_pred ---------CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCC
Confidence 223457899999999998889999999999999999999999996543
No 228
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=2.5e-36 Score=311.06 Aligned_cols=203 Identities=30% Similarity=0.438 Sum_probs=173.6
Q ss_pred cCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCCh-----hhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEE
Q 005227 375 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL-----QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 448 (707)
Q Consensus 375 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~-----~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~l 448 (707)
++|...+.||+|++|.||+|... +++.||+|.+..... ...+.+.+|++++++++||||+++++++...+..++
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 81 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI 81 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence 57889999999999999999964 689999998764321 123568889999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCC
Q 005227 449 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 528 (707)
Q Consensus 449 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~ 528 (707)
||||+++++|.+++... ..+++..+..++.|++.||+|||+.+ |+|+||+|+||++++++.++|+|||+++....
T Consensus 82 v~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lH~~~---i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~ 156 (263)
T cd06625 82 FMEYMPGGSVKDQLKAY--GALTETVTRKYTRQILEGVEYLHSNM---IVHRDIKGANILRDSAGNVKLGDFGASKRLQT 156 (263)
T ss_pred EEEECCCCcHHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEeecccceeccc
Confidence 99999999999999654 34889999999999999999999998 99999999999999999999999999876532
Q ss_pred CCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCC
Q 005227 529 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 586 (707)
Q Consensus 529 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~ 586 (707)
.... ........|+..|+|||++.+..++.++||||||+++|||++|+.||...
T Consensus 157 ~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~ 210 (263)
T cd06625 157 ICSS----GTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEF 210 (263)
T ss_pred cccc----cccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCcccc
Confidence 2100 01112345788999999999988999999999999999999999999643
No 229
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=2.7e-36 Score=314.00 Aligned_cols=258 Identities=27% Similarity=0.442 Sum_probs=205.3
Q ss_pred hcCCCccceEeeeCceEEEEEEeC-CCc----EEEEEEeccCC-hhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEE
Q 005227 374 TNNFNSSTQIGQGGYGKVYKGILP-DGT----VVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQM 447 (707)
Q Consensus 374 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~----~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~ 447 (707)
.++|+..++||+|+||+||+|.+. +++ .||+|.+.... ....+.+.+|+.+++.++|+||+++++++... ..+
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~ 84 (279)
T cd05109 6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLTS-TVQ 84 (279)
T ss_pred hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcCC-CcE
Confidence 457888999999999999999853 454 48999987543 33456788999999999999999999999754 577
Q ss_pred EEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCC
Q 005227 448 LVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAP 527 (707)
Q Consensus 448 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~ 527 (707)
++|||+++|+|.++++... ..+++..++.++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||+++...
T Consensus 85 l~~~~~~~g~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~---iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~ 160 (279)
T cd05109 85 LVTQLMPYGCLLDYVRENK-DRIGSQDLLNWCVQIAKGMSYLEEVR---LVHRDLAARNVLVKSPNHVKITDFGLARLLD 160 (279)
T ss_pred EEEEcCCCCCHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccccceEEEcCCCcEEECCCCceeecc
Confidence 9999999999999997542 35899999999999999999999998 9999999999999999999999999998764
Q ss_pred CCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHhhcccchhhc
Q 005227 528 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVI 606 (707)
Q Consensus 528 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~ 606 (707)
.... ........++..|+|||...+..++.++|||||||++|||++ |..||....... ......
T Consensus 161 ~~~~-----~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~--~~~~~~-------- 225 (279)
T cd05109 161 IDET-----EYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPARE--IPDLLE-------- 225 (279)
T ss_pred cccc-----eeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH--HHHHHH--------
Confidence 3211 011112234678999999999999999999999999999998 888986433211 111111
Q ss_pred cCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 005227 607 DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 651 (707)
Q Consensus 607 ~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~ 651 (707)
.+.....+..++..+.+++..||+.+|+.||++.++++.++.+..
T Consensus 226 ~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~ 270 (279)
T cd05109 226 KGERLPQPPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMAR 270 (279)
T ss_pred CCCcCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 111222344566788999999999999999999999998887644
No 230
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=2.8e-36 Score=309.83 Aligned_cols=249 Identities=29% Similarity=0.486 Sum_probs=200.4
Q ss_pred ceEeeeCceEEEEEEeC--C--CcEEEEEEeccCCh-hhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEecCCC
Q 005227 381 TQIGQGGYGKVYKGILP--D--GTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSN 455 (707)
Q Consensus 381 ~~lG~G~fg~Vy~~~~~--~--~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~ 455 (707)
++||+|+||.||+|.+. + +..||+|.+..... ...+++.+|+++++.+.|+||+++++++. ....++||||+++
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~ 79 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAPL 79 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCCC
Confidence 46999999999999853 2 26899999886544 34567899999999999999999999876 4568999999999
Q ss_pred CCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCCCcc
Q 005227 456 GTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIV 535 (707)
Q Consensus 456 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 535 (707)
++|.+++.... .+++..++.++.|++.||+|||..+ ++|+||||+||++++++.+||+|||+++........
T Consensus 80 ~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lh~~~---i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~--- 151 (257)
T cd05060 80 GPLLKYLKKRR--EIPVSDLKELAHQVAMGMAYLESKH---FVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDY--- 151 (257)
T ss_pred CcHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHhhcC---eeccCcccceEEEcCCCcEEeccccccceeecCCcc---
Confidence 99999997644 6899999999999999999999998 999999999999999999999999999865432210
Q ss_pred ccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHhhcccchhhccCCCCCCC
Q 005227 536 PAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYP 614 (707)
Q Consensus 536 ~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 614 (707)
........++..|+|||.+.+..++.++|||||||++|||++ |..||...... +..... . .......+
T Consensus 152 -~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~-~~~~~~-~--------~~~~~~~~ 220 (257)
T cd05060 152 -YRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGA-EVIAML-E--------SGERLPRP 220 (257)
T ss_pred -cccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHH-HHHHHH-H--------cCCcCCCC
Confidence 001111224568999999999999999999999999999998 99999654431 111111 1 11122345
Q ss_pred hHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 005227 615 SECVEKFIKLALKCCQDETDARPSMSEVMRELESI 649 (707)
Q Consensus 615 ~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~ 649 (707)
..++..+.+++.+|++.+|++||++.++.+.|+.+
T Consensus 221 ~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 255 (257)
T cd05060 221 EECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRD 255 (257)
T ss_pred CCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhc
Confidence 56678899999999999999999999999999865
No 231
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=3.5e-36 Score=308.91 Aligned_cols=250 Identities=27% Similarity=0.424 Sum_probs=203.4
Q ss_pred ceEeeeCceEEEEEEeCC--C--cEEEEEEeccCCh-hhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEecCCC
Q 005227 381 TQIGQGGYGKVYKGILPD--G--TVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSN 455 (707)
Q Consensus 381 ~~lG~G~fg~Vy~~~~~~--~--~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~ 455 (707)
+.||+|++|.||+|.+.+ + ..||||.+..... ...+.+.+|++++++++|+||+++++++.. ...++||||+++
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~ 79 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPL 79 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCC
Confidence 468999999999999643 3 3699999987665 456789999999999999999999999988 889999999999
Q ss_pred CCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCCCcc
Q 005227 456 GTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIV 535 (707)
Q Consensus 456 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 535 (707)
++|.+++.......+++..++.++.|++.||+|||+.+ ++|+||||+||+++.++.+||+|||+++........
T Consensus 80 ~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~--- 153 (257)
T cd05040 80 GSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKR---FIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDH--- 153 (257)
T ss_pred CcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCC---ccccccCcccEEEecCCEEEeccccccccccccccc---
Confidence 99999997754356899999999999999999999998 999999999999999999999999999876432211
Q ss_pred ccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHhhcccchhhccCCCCCCC
Q 005227 536 PAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYP 614 (707)
Q Consensus 536 ~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 614 (707)
........++..|+|||++.+..++.++|||||||++|||++ |+.||...... +....... .......+
T Consensus 154 -~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~-~~~~~~~~--------~~~~~~~~ 223 (257)
T cd05040 154 -YVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGS-QILKKIDK--------EGERLERP 223 (257)
T ss_pred -eecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHH-HHHHHHHh--------cCCcCCCC
Confidence 011123456789999999999999999999999999999998 99999644332 11111111 11112234
Q ss_pred hHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 005227 615 SECVEKFIKLALKCCQDETDARPSMSEVMRELE 647 (707)
Q Consensus 615 ~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~ 647 (707)
...+..+.+++.+|++.+|++||++.++++.|.
T Consensus 224 ~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 224 EACPQDIYNVMLQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred ccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence 456678999999999999999999999998764
No 232
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=2.4e-36 Score=309.92 Aligned_cols=201 Identities=26% Similarity=0.419 Sum_probs=175.7
Q ss_pred CCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCC--hhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEec
Q 005227 376 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 452 (707)
Q Consensus 376 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~ 452 (707)
+|+..+.||+|+||.||++... +++.||+|.+.... ....+++.+|+.++++++|+||+++++++...+..++||||
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDY 80 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEec
Confidence 5888999999999999999964 78999999986432 23346789999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCC
Q 005227 453 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 532 (707)
Q Consensus 453 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 532 (707)
+++++|.+++.......+++..++.++.|++.||+|||+.+ ++|+||+|+||+++.++.++|+|||++.......
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~-- 155 (256)
T cd08218 81 CEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRK---ILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTV-- 155 (256)
T ss_pred CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCCEEEeeccceeecCcch--
Confidence 99999999997755556899999999999999999999998 9999999999999999999999999997654321
Q ss_pred CccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCC
Q 005227 533 GIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 586 (707)
Q Consensus 533 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~ 586 (707)
.......|+..|+|||+..+..++.++|||||||+++||++|+.||...
T Consensus 156 -----~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~ 204 (256)
T cd08218 156 -----ELARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAG 204 (256)
T ss_pred -----hhhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCC
Confidence 1122345788999999999999999999999999999999999998643
No 233
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=3e-36 Score=310.35 Aligned_cols=254 Identities=31% Similarity=0.503 Sum_probs=197.5
Q ss_pred ceEeeeCceEEEEEEeC----CCcEEEEEEeccC-ChhhHHHHHHHHHHHHccCCCcceeEEEEEE-eCCeEEEEEecCC
Q 005227 381 TQIGQGGYGKVYKGILP----DGTVVAVKRAQEG-SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCD-EEGEQMLVYEFMS 454 (707)
Q Consensus 381 ~~lG~G~fg~Vy~~~~~----~~~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~-~~~~~~lV~E~~~ 454 (707)
+.||+|+||.||+|.+. ++..||+|.+... .....+.+.+|+.+++.++||||+++++++. .++..++||||+.
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~ 80 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMK 80 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCC
Confidence 46899999999999853 2467999988643 2334567889999999999999999999875 4556899999999
Q ss_pred CCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCCCc
Q 005227 455 NGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGI 534 (707)
Q Consensus 455 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 534 (707)
+|+|.+++.... ....+..+..++.|+++||+|||+.+ ++||||||+|||+++++.+||+|||+++.........
T Consensus 81 ~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~- 155 (262)
T cd05058 81 HGDLRNFIRSET-HNPTVKDLIGFGLQVAKGMEYLASKK---FVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYS- 155 (262)
T ss_pred CCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCC---ccccccCcceEEEcCCCcEEECCccccccccCCccee-
Confidence 999999997543 34677888999999999999999988 9999999999999999999999999997553221100
Q ss_pred cccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcC-CCCCCCCchhHHHHHHHhhcccchhhccCCCCCC
Q 005227 535 VPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTG-MQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSY 613 (707)
Q Consensus 535 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 613 (707)
........++..|+|||++.+..++.++|||||||++|||++| ..||... +....... +..+.....
T Consensus 156 --~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~-~~~~~~~~---------~~~~~~~~~ 223 (262)
T cd05058 156 --VHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV-DSFDITVY---------LLQGRRLLQ 223 (262)
T ss_pred --ecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCC-CHHHHHHH---------HhcCCCCCC
Confidence 0111233456789999999999999999999999999999995 4555433 22222111 111222223
Q ss_pred ChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 005227 614 PSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 651 (707)
Q Consensus 614 ~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~ 651 (707)
+...+..+.+++..||+.+|++||++.++++.+++++.
T Consensus 224 ~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~~ 261 (262)
T cd05058 224 PEYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQIFS 261 (262)
T ss_pred CCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHhc
Confidence 44456789999999999999999999999999988753
No 234
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=4.2e-36 Score=320.98 Aligned_cols=266 Identities=25% Similarity=0.469 Sum_probs=211.1
Q ss_pred HHHHhcCCCccceEeeeCceEEEEEEeC--------CCcEEEEEEeccCC-hhhHHHHHHHHHHHHcc-CCCcceeEEEE
Q 005227 370 MALATNNFNSSTQIGQGGYGKVYKGILP--------DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRL-HHRNLVSLVGY 439 (707)
Q Consensus 370 l~~~~~~~~~~~~lG~G~fg~Vy~~~~~--------~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l-~h~nIv~l~~~ 439 (707)
++....+|++.+.||+|+||.||+|... .+..||+|.+.... ....+++.+|+++++++ +|+||++++++
T Consensus 7 ~~~~~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~ 86 (334)
T cd05100 7 WELSRTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGA 86 (334)
T ss_pred cccCHhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEE
Confidence 3444567899999999999999999742 12368999887533 23346789999999999 79999999999
Q ss_pred EEeCCeEEEEEecCCCCCHHHHHhhcC--------------CCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCC
Q 005227 440 CDEEGEQMLVYEFMSNGTLRDQLSAKS--------------KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKAS 505 (707)
Q Consensus 440 ~~~~~~~~lV~E~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~ 505 (707)
|...+..++||||+++|+|.+++.... ...+++..+..++.|++.||+|||+.+ |+||||||+
T Consensus 87 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~g---ivH~dlkp~ 163 (334)
T cd05100 87 CTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQK---CIHRDLAAR 163 (334)
T ss_pred EccCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCC---eeccccccc
Confidence 999999999999999999999997532 235788999999999999999999998 999999999
Q ss_pred CEEEcCCCcEEEeeecccccCCCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc-CCCCCC
Q 005227 506 NILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPIS 584 (707)
Q Consensus 506 NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~ellt-G~~pf~ 584 (707)
||++++++.+||+|||+++........ .......++..|+|||++.+..++.++|||||||++|||++ |..||.
T Consensus 164 Nill~~~~~~kL~Dfg~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~ 238 (334)
T cd05100 164 NVLVTEDNVMKIADFGLARDVHNIDYY-----KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYP 238 (334)
T ss_pred eEEEcCCCcEEECCcccceeccccccc-----ccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCC
Confidence 999999999999999999765432110 01112234567999999999999999999999999999998 888886
Q ss_pred CCchhHHHHHHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcC
Q 005227 585 HGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMM 653 (707)
Q Consensus 585 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~ 653 (707)
.... .+..... ..+.....+..++..+.+++.+||+.+|++||++.++++.|+.+....
T Consensus 239 ~~~~-~~~~~~~---------~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~~~ 297 (334)
T cd05100 239 GIPV-EELFKLL---------KEGHRMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLTVT 297 (334)
T ss_pred CCCH-HHHHHHH---------HcCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHhhhc
Confidence 4332 2221111 111222334556678999999999999999999999999999887533
No 235
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=3.9e-36 Score=310.73 Aligned_cols=205 Identities=27% Similarity=0.400 Sum_probs=175.1
Q ss_pred HHHHhcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEE
Q 005227 370 MALATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 448 (707)
Q Consensus 370 l~~~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~l 448 (707)
++.+++++.....||+|+||.||+|... +++.||+|.+........+.+.+|+++++.++|+||+++++++...+..++
T Consensus 3 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 82 (268)
T cd06624 3 YEYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKI 82 (268)
T ss_pred cccccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEE
Confidence 4556777777889999999999999964 678999999887666666789999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhcCCCCc--CHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcC-CCcEEEeeeccccc
Q 005227 449 VYEFMSNGTLRDQLSAKSKEPL--GFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDH-KFTAKVADFGLSRL 525 (707)
Q Consensus 449 V~E~~~~gsL~~~l~~~~~~~l--~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~-~~~~kl~DFGla~~ 525 (707)
|+||+++++|.+++.... ..+ ++..+..++.|++.||+|||+.+ |+||||||+||+++. ++.+||+|||++..
T Consensus 83 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~h~dl~p~nil~~~~~~~~~l~dfg~~~~ 158 (268)
T cd06624 83 FMEQVPGGSLSALLRSKW-GPLKDNEQTIIFYTKQILEGLKYLHDNQ---IVHRDIKGDNVLVNTYSGVVKISDFGTSKR 158 (268)
T ss_pred EEecCCCCCHHHHHHHhc-ccCCCcHHHHHHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEcCCCCeEEEecchhhee
Confidence 999999999999997642 234 78889999999999999999998 999999999999986 67999999999876
Q ss_pred CCCCCCCCccccceecccccCCCccchhhhccC--CCCCchhhHHHHHHHHHHHcCCCCCCC
Q 005227 526 APVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTH--KLTDKSDVYSLGVVFLELLTGMQPISH 585 (707)
Q Consensus 526 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~s~~sDVwSlGvll~elltG~~pf~~ 585 (707)
....+ .......|+..|+|||++.+. .++.++||||||+++|||++|+.||..
T Consensus 159 ~~~~~-------~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~ 213 (268)
T cd06624 159 LAGIN-------PCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIE 213 (268)
T ss_pred cccCC-------CccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCcc
Confidence 53221 111223578899999998764 378899999999999999999999864
No 236
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=1.6e-36 Score=325.32 Aligned_cols=261 Identities=26% Similarity=0.432 Sum_probs=204.4
Q ss_pred hcCCCccceEeeeCceEEEEEEe------CCCcEEEEEEeccCChh-hHHHHHHHHHHHHcc-CCCcceeEEEEEEeC-C
Q 005227 374 TNNFNSSTQIGQGGYGKVYKGIL------PDGTVVAVKRAQEGSLQ-GEKEFLTEIQFLSRL-HHRNLVSLVGYCDEE-G 444 (707)
Q Consensus 374 ~~~~~~~~~lG~G~fg~Vy~~~~------~~~~~vavK~l~~~~~~-~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~-~ 444 (707)
.++|++.+.||+|+||.||+|.+ .+++.||||++...... ....+.+|+.++.++ +|+||+++++++... .
T Consensus 6 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~ 85 (343)
T cd05103 6 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG 85 (343)
T ss_pred hhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCC
Confidence 46789999999999999999973 35789999999754322 345788999999999 689999999988654 4
Q ss_pred eEEEEEecCCCCCHHHHHhhcC----------------------------------------------------------
Q 005227 445 EQMLVYEFMSNGTLRDQLSAKS---------------------------------------------------------- 466 (707)
Q Consensus 445 ~~~lV~E~~~~gsL~~~l~~~~---------------------------------------------------------- 466 (707)
..++||||+++|+|.+++....
T Consensus 86 ~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (343)
T cd05103 86 PLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEE 165 (343)
T ss_pred ceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhh
Confidence 6789999999999999986532
Q ss_pred -------CCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCCCccccce
Q 005227 467 -------KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHV 539 (707)
Q Consensus 467 -------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~ 539 (707)
...+++..+..++.|+++||+|||+.+ |+||||||+||++++++.+||+|||+++....... ...
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~-----~~~ 237 (343)
T cd05103 166 AEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSENNVVKICDFGLARDIYKDPD-----YVR 237 (343)
T ss_pred hhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCccCeEEEcCCCcEEEEecccccccccCcc-----hhh
Confidence 123678888999999999999999998 99999999999999999999999999976532110 011
Q ss_pred ecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHhhcccchhhccCCCCCCChHHH
Q 005227 540 STVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECV 618 (707)
Q Consensus 540 ~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 618 (707)
.....++..|+|||++.+..++.++|||||||++|||++ |..||......... .... ..+.....+....
T Consensus 238 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~-~~~~--------~~~~~~~~~~~~~ 308 (343)
T cd05103 238 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF-CRRL--------KEGTRMRAPDYTT 308 (343)
T ss_pred cCCCCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHH-HHHH--------hccCCCCCCCCCC
Confidence 122345678999999999999999999999999999997 88998643321111 1111 1111122233345
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 005227 619 EKFIKLALKCCQDETDARPSMSEVMRELESIWN 651 (707)
Q Consensus 619 ~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~ 651 (707)
..+.+++..||+.+|++||++.++++.|+.+.+
T Consensus 309 ~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~~~ 341 (343)
T cd05103 309 PEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 341 (343)
T ss_pred HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 678999999999999999999999999988764
No 237
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=2.2e-36 Score=317.38 Aligned_cols=261 Identities=26% Similarity=0.412 Sum_probs=202.9
Q ss_pred hcCCCccceEeeeCceEEEEEEeCC---------------CcEEEEEEeccCCh-hhHHHHHHHHHHHHccCCCcceeEE
Q 005227 374 TNNFNSSTQIGQGGYGKVYKGILPD---------------GTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLV 437 (707)
Q Consensus 374 ~~~~~~~~~lG~G~fg~Vy~~~~~~---------------~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~ 437 (707)
..+|++.+.||+|+||.||++...+ ...||+|.+..... .....+.+|++++++++|+|+++++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~ 83 (295)
T cd05097 4 RQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLL 83 (295)
T ss_pred hHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEE
Confidence 4578899999999999999987532 23589999876432 3345789999999999999999999
Q ss_pred EEEEeCCeEEEEEecCCCCCHHHHHhhcC----------CCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCE
Q 005227 438 GYCDEEGEQMLVYEFMSNGTLRDQLSAKS----------KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNI 507 (707)
Q Consensus 438 ~~~~~~~~~~lV~E~~~~gsL~~~l~~~~----------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NI 507 (707)
+++...+..++||||+++++|.+++.... ...+++..++.++.|++.||+|||+.+ ++||||||+||
T Consensus 84 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~---i~H~dlkp~Ni 160 (295)
T cd05097 84 GVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLN---FVHRDLATRNC 160 (295)
T ss_pred EEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcC---eeccccChhhE
Confidence 99999999999999999999999996532 124688999999999999999999998 99999999999
Q ss_pred EEcCCCcEEEeeecccccCCCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc--CCCCCCC
Q 005227 508 LLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT--GMQPISH 585 (707)
Q Consensus 508 Ll~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~ellt--G~~pf~~ 585 (707)
++++++.+||+|||++........ ........++..|+|||++.+..++.++|||||||++|||++ |..||..
T Consensus 161 ll~~~~~~kl~dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~ 235 (295)
T cd05097 161 LVGNHYTIKIADFGMSRNLYSGDY-----YRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSL 235 (295)
T ss_pred EEcCCCcEEecccccccccccCcc-----eeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcc
Confidence 999999999999999976532211 111223345678999999999999999999999999999998 5667754
Q ss_pred Cchh--HHHHHHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 005227 586 GKNI--VREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELE 647 (707)
Q Consensus 586 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~ 647 (707)
.... .......+.. .........+...+..+.+++.+||+.+|++||++.++++.|+
T Consensus 236 ~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~ 294 (295)
T cd05097 236 LSDEQVIENTGEFFRN-----QGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLR 294 (295)
T ss_pred cChHHHHHHHHHhhhh-----ccccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence 3221 1111110100 0001111123345678999999999999999999999998875
No 238
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=3.9e-36 Score=308.48 Aligned_cols=200 Identities=27% Similarity=0.408 Sum_probs=173.0
Q ss_pred CCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCC--hhhHHHHHHHHHHHHccCCCcceeEEEEEEe-CCeEEEEEe
Q 005227 376 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE-EGEQMLVYE 451 (707)
Q Consensus 376 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~-~~~~~lV~E 451 (707)
+|++.+.||+|++|.||++..+ +++.||+|.+.... ....+.+.+|++++++++|+|++++++.+.. ....++|||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e 80 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMG 80 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEec
Confidence 4788999999999999999965 67899999986532 2334578899999999999999999998764 446799999
Q ss_pred cCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCC
Q 005227 452 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 531 (707)
Q Consensus 452 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 531 (707)
|+++++|.+++.......+++..++.++.+++.|++|||+.+ ++|+||||+||+++.++.++|+|||++.......
T Consensus 81 ~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~---i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~- 156 (257)
T cd08223 81 FCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKH---ILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQC- 156 (257)
T ss_pred ccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCchhEEEecCCcEEEecccceEEecccC-
Confidence 999999999998755566899999999999999999999998 9999999999999999999999999997653321
Q ss_pred CCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCC
Q 005227 532 EGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISH 585 (707)
Q Consensus 532 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~ 585 (707)
.......+++.|+|||++.+..++.++|||||||+++||++|+.||..
T Consensus 157 ------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~ 204 (257)
T cd08223 157 ------DMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNA 204 (257)
T ss_pred ------CccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCC
Confidence 112334578899999999999999999999999999999999999864
No 239
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=2.5e-36 Score=312.39 Aligned_cols=259 Identities=28% Similarity=0.472 Sum_probs=205.3
Q ss_pred cCCCccceEeeeCceEEEEEEeC-CC---cEEEEEEeccCC-hhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEE
Q 005227 375 NNFNSSTQIGQGGYGKVYKGILP-DG---TVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 449 (707)
Q Consensus 375 ~~~~~~~~lG~G~fg~Vy~~~~~-~~---~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV 449 (707)
..|++.+.||+|+||.||+|... ++ ..||||.+.... ....++|..|+.+++.++||||+++++++..+...++|
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv 83 (269)
T cd05065 4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMII 83 (269)
T ss_pred HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEE
Confidence 34778899999999999999964 33 369999987542 33356899999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCC
Q 005227 450 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 529 (707)
Q Consensus 450 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~ 529 (707)
|||+++++|.+++.... ..+++..++.++.|++.||+|||+.+ ++|+||||+||+++.++.+|++|||++......
T Consensus 84 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~~l~~al~~lH~~g---~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~ 159 (269)
T cd05065 84 TEFMENGALDSFLRQND-GQFTVIQLVGMLRGIAAGMKYLSEMN---YVHRDLAARNILVNSNLVCKVSDFGLSRFLEDD 159 (269)
T ss_pred EecCCCCcHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccChheEEEcCCCcEEECCCccccccccC
Confidence 99999999999997643 35899999999999999999999998 999999999999999999999999998765432
Q ss_pred CCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHhhcccchhhccC
Q 005227 530 DIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDG 608 (707)
Q Consensus 530 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 608 (707)
...... ........+..|+|||++.+..++.++|||||||++||+++ |..||...... +..... . ..
T Consensus 160 ~~~~~~--~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~-~~~~~i-~--------~~ 227 (269)
T cd05065 160 TSDPTY--TSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQ-DVINAI-E--------QD 227 (269)
T ss_pred cccccc--ccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHH-HHHHHH-H--------cC
Confidence 211000 00011112457999999999999999999999999999987 99999654332 111111 0 11
Q ss_pred CCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 005227 609 NMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 649 (707)
Q Consensus 609 ~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~ 649 (707)
...+.+.+++..+.+++..||+.+|++||++.+++..|+.+
T Consensus 228 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 228 YRLPPPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred CcCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 11223455677889999999999999999999999988754
No 240
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-38 Score=308.39 Aligned_cols=246 Identities=26% Similarity=0.432 Sum_probs=210.5
Q ss_pred CCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEecCC
Q 005227 376 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMS 454 (707)
Q Consensus 376 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~ 454 (707)
-|++.++||+|+||.||+|.++ .|.+||||.+... .+.+++..|+.+|++.+.+++|++||.|......|+|||||.
T Consensus 34 VFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~--sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCG 111 (502)
T KOG0574|consen 34 VFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD--TDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCG 111 (502)
T ss_pred HHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc--chHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcC
Confidence 3667899999999999999976 7999999998753 345789999999999999999999999999999999999999
Q ss_pred CCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCCCc
Q 005227 455 NGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGI 534 (707)
Q Consensus 455 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 534 (707)
.|+..+.++.+ +.++.++++..+.++.++||+|||... -||||||+.|||++-+|.+|++|||.|-.+...
T Consensus 112 AGSiSDI~R~R-~K~L~E~EIs~iL~~TLKGL~YLH~~~---KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDT----- 182 (502)
T KOG0574|consen 112 AGSISDIMRAR-RKPLSEQEISAVLRDTLKGLQYLHDLK---KIHRDIKAGNILLNTDGIAKLADFGVAGQLTDT----- 182 (502)
T ss_pred CCcHHHHHHHh-cCCccHHHHHHHHHHHHhHHHHHHHHH---HHHhhcccccEEEcccchhhhhhccccchhhhh-----
Confidence 99999999765 457999999999999999999999988 799999999999999999999999999765421
Q ss_pred cccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCCCCC--
Q 005227 535 VPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGS-- 612 (707)
Q Consensus 535 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 612 (707)
-.....+.||+-|||||++..-.|+.++||||+|++..||..|++||.+-.. ...++-+.....+.
T Consensus 183 --MAKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHP----------MRAIFMIPT~PPPTF~ 250 (502)
T KOG0574|consen 183 --MAKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHP----------MRAIFMIPTKPPPTFK 250 (502)
T ss_pred --HHhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccc----------cceeEeccCCCCCCCC
Confidence 2234567899999999999999999999999999999999999999975443 12222222222222
Q ss_pred CChHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005227 613 YPSECVEKFIKLALKCCQDETDARPSMSEVMR 644 (707)
Q Consensus 613 ~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~ 644 (707)
-|+.++.++.++++.|+-+.|++|-|+.++++
T Consensus 251 KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~ 282 (502)
T KOG0574|consen 251 KPEEWSSEFNDFIRSCLIKKPEERKTALRLCE 282 (502)
T ss_pred ChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhh
Confidence 46788899999999999999999999887754
No 241
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=1.1e-36 Score=319.47 Aligned_cols=281 Identities=24% Similarity=0.355 Sum_probs=204.7
Q ss_pred cCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCChh--hHHHHHHHHHHHHccC-CCcceeEEEEEEeCCe-----
Q 005227 375 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ--GEKEFLTEIQFLSRLH-HRNLVSLVGYCDEEGE----- 445 (707)
Q Consensus 375 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~--~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~----- 445 (707)
++|+..+.||+|+||.||+|... +++.||+|........ ....+.+|+.+++.++ |+||+++++++...+.
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~ 80 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS 80 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence 46889999999999999999965 7899999987653322 2357888999999995 6999999999977665
Q ss_pred EEEEEecCCCCCHHHHHhhcC---CCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcC-CCcEEEeeec
Q 005227 446 QMLVYEFMSNGTLRDQLSAKS---KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDH-KFTAKVADFG 521 (707)
Q Consensus 446 ~~lV~E~~~~gsL~~~l~~~~---~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~-~~~~kl~DFG 521 (707)
.++||||+++ +|.+++.... ...+++..++.++.||++||+|||+.+ |+||||||+||+++. ++.+||+|||
T Consensus 81 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~---i~H~dl~~~nil~~~~~~~~kl~dfg 156 (295)
T cd07837 81 LYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHG---VMHRDLKPQNLLVDKQKGLLKIADLG 156 (295)
T ss_pred EEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCChHHEEEecCCCeEEEeecc
Confidence 8999999975 8988886532 246899999999999999999999998 999999999999998 8999999999
Q ss_pred ccccCCCCCCCCccccceecccccCCCccchhhhcc-CCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcc
Q 005227 522 LSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSS 600 (707)
Q Consensus 522 la~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~ 600 (707)
+++...... .......+++.|+|||++.+ ..++.++||||||+++|||++|..||............ ...
T Consensus 157 ~~~~~~~~~-------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~-~~~- 227 (295)
T cd07837 157 LGRAFSIPV-------KSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHI-FKL- 227 (295)
T ss_pred cceecCCCc-------cccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHH-HHH-
Confidence 987553221 11122346788999999875 56789999999999999999999999754443222111 100
Q ss_pred cchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCc
Q 005227 601 MMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSS 680 (707)
Q Consensus 601 ~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e 680 (707)
+. ..+........++.... ..|..+|. .+....+..+....+||.+||..||++||+++|
T Consensus 228 -----~~----~~~~~~~~~~~~~~~~~--~~~~~~~~---------~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~e 287 (295)
T cd07837 228 -----LG----TPTEQVWPGVSKLRDWH--EFPQWKPQ---------DLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKA 287 (295)
T ss_pred -----hC----CCChhhCcchhhccchh--hcCcccch---------hHHHhccccCHHHHHHHHHHccCChhhcCCHHH
Confidence 00 00000000000000000 00111111 111223344556678999999999999999999
Q ss_pred CCCCCCCC
Q 005227 681 MLKHPYVS 688 (707)
Q Consensus 681 ~L~Hp~f~ 688 (707)
+|.||||.
T Consensus 288 il~~~~~~ 295 (295)
T cd07837 288 ALTHPYFD 295 (295)
T ss_pred HhcCCCcC
Confidence 99999985
No 242
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=2.9e-36 Score=309.33 Aligned_cols=251 Identities=31% Similarity=0.514 Sum_probs=204.0
Q ss_pred cCCCccceEeeeCceEEEEEEeCCCcEEEEEEeccCChhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEecCC
Q 005227 375 NNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMS 454 (707)
Q Consensus 375 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~ 454 (707)
.+|+..+.||+|+||.||+|.+.+++.+|+|.+.... .....+.+|++++++++|||++++++++......++||||++
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~ 82 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGA-MSEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFME 82 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCC-CCHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCC
Confidence 4677889999999999999998778899999887533 234578999999999999999999999999999999999999
Q ss_pred CCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCCCc
Q 005227 455 NGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGI 534 (707)
Q Consensus 455 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 534 (707)
+++|.+++.... ..+++..++.++.|++.||+|||+.+ ++|+||||+||+++.++.+||+|||+++......
T Consensus 83 ~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~---i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~---- 154 (256)
T cd05112 83 HGCLSDYLRAQR-GKFSQETLLGMCLDVCEGMAYLESSN---VIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQ---- 154 (256)
T ss_pred CCcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHHHCC---ccccccccceEEEcCCCeEEECCCcceeecccCc----
Confidence 999999997543 35889999999999999999999998 9999999999999999999999999987553221
Q ss_pred cccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHhhcccchhhccCCCCCC
Q 005227 535 VPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSY 613 (707)
Q Consensus 535 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 613 (707)
........++.+|+|||++.+..++.++||||||+++|||++ |+.||..... ....... . .+.....
T Consensus 155 --~~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~-~~~~~~~-~--------~~~~~~~ 222 (256)
T cd05112 155 --YTSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSN-SEVVETI-N--------AGFRLYK 222 (256)
T ss_pred --ccccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCH-HHHHHHH-h--------CCCCCCC
Confidence 011122234678999999998899999999999999999998 9999865432 1111111 0 1111112
Q ss_pred ChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 005227 614 PSECVEKFIKLALKCCQDETDARPSMSEVMREL 646 (707)
Q Consensus 614 ~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L 646 (707)
+...+..+.+++.+||+.+|++||++.++++.|
T Consensus 223 ~~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l 255 (256)
T cd05112 223 PRLASQSVYELMQHCWKERPEDRPSFSLLLHQL 255 (256)
T ss_pred CCCCCHHHHHHHHHHcccChhhCCCHHHHHHhh
Confidence 333457899999999999999999999999876
No 243
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=3.9e-36 Score=315.42 Aligned_cols=263 Identities=28% Similarity=0.432 Sum_probs=206.1
Q ss_pred hcCCCccceEeeeCceEEEEEEeCC-----------------CcEEEEEEeccCCh-hhHHHHHHHHHHHHccCCCccee
Q 005227 374 TNNFNSSTQIGQGGYGKVYKGILPD-----------------GTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVS 435 (707)
Q Consensus 374 ~~~~~~~~~lG~G~fg~Vy~~~~~~-----------------~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~nIv~ 435 (707)
.++|++.+.||+|+||.||+|...+ +..||+|.+..... ...+.+.+|++++++++|+||++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~ 83 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIAR 83 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeE
Confidence 4578899999999999999998542 24689999876432 34567899999999999999999
Q ss_pred EEEEEEeCCeEEEEEecCCCCCHHHHHhhcC---------CCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCC
Q 005227 436 LVGYCDEEGEQMLVYEFMSNGTLRDQLSAKS---------KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASN 506 (707)
Q Consensus 436 l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~---------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~N 506 (707)
+++++..++..++||||+++++|.+++.... ...+++..++.++.|++.||+|||+.+ |+||||||+|
T Consensus 84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~---i~H~dlkp~N 160 (296)
T cd05051 84 LLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLN---FVHRDLATRN 160 (296)
T ss_pred EEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcC---ccccccchhc
Confidence 9999999999999999999999999997643 236899999999999999999999998 9999999999
Q ss_pred EEEcCCCcEEEeeecccccCCCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc--CCCCCC
Q 005227 507 ILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT--GMQPIS 584 (707)
Q Consensus 507 ILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~ellt--G~~pf~ 584 (707)
|++++++.++|+|||+++.....+. ........++..|+|||++.+..++.++|||||||++|||++ |..||.
T Consensus 161 ili~~~~~~~l~dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~ 235 (296)
T cd05051 161 CLVGKNYTIKIADFGMSRNLYSSDY-----YRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYE 235 (296)
T ss_pred eeecCCCceEEccccceeecccCcc-----eeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCC
Confidence 9999999999999999976543221 111223446778999999998899999999999999999998 667776
Q ss_pred CCchhHHHHHHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 005227 585 HGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELE 647 (707)
Q Consensus 585 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~ 647 (707)
....... ...... .....-.......+..++.++.+++.+|++.+|.+||++.++++.|+
T Consensus 236 ~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~ 295 (296)
T cd05051 236 HLTDQQV-IENAGH--FFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQ 295 (296)
T ss_pred CcChHHH-HHHHHh--ccccccccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhc
Confidence 4332111 111100 00000000111223345578999999999999999999999998875
No 244
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=3.6e-36 Score=308.68 Aligned_cols=249 Identities=26% Similarity=0.395 Sum_probs=198.4
Q ss_pred CCCccceEeeeCceEEEEEEe-CCCcEEEEEEeccCC--hhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEec
Q 005227 376 NFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 452 (707)
Q Consensus 376 ~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~ 452 (707)
+|+..+.||+|+||.||.+.. ++++.|++|.+.... ....+++.+|++++++++|+||+++++++.+.+..++||||
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~ 80 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEY 80 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEe
Confidence 588899999999999999985 478999999876532 33456788999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCC
Q 005227 453 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 532 (707)
Q Consensus 453 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 532 (707)
+++++|.+++.......+++..+..++.|+++||+|||+.+ ++|+||+|+||++++++.+||+|||++........
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~- 156 (256)
T cd08221 81 ANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAG---ILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYS- 156 (256)
T ss_pred cCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCC---ccccCCChHhEEEeCCCCEEECcCcceEEcccccc-
Confidence 99999999997765566899999999999999999999998 99999999999999999999999999986543221
Q ss_pred CccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCCCCC
Q 005227 533 GIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGS 612 (707)
Q Consensus 533 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 612 (707)
......|+..|+|||++.+..++.++||||||+++|||++|..||..... .+.... +..+....
T Consensus 157 ------~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~-~~~~~~---------~~~~~~~~ 220 (256)
T cd08221 157 ------MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNP-LNLVVK---------IVQGNYTP 220 (256)
T ss_pred ------cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCH-HHHHHH---------HHcCCCCC
Confidence 12234578999999999988899999999999999999999999864332 111111 11122222
Q ss_pred CChHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005227 613 YPSECVEKFIKLALKCCQDETDARPSMSEVMR 644 (707)
Q Consensus 613 ~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~ 644 (707)
.+...+..+.+++.+|++.+|++||++.++++
T Consensus 221 ~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~ 252 (256)
T cd08221 221 VVSVYSSELISLVHSLLQQDPEKRPTADEVLD 252 (256)
T ss_pred CccccCHHHHHHHHHHcccCcccCCCHHHHhh
Confidence 23344455666666666666666666666554
No 245
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.8e-38 Score=326.44 Aligned_cols=243 Identities=30% Similarity=0.488 Sum_probs=205.5
Q ss_pred CCCccceEeeeCceEEEEEEe-CCCcEEEEEEeccCChhh---HHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEe
Q 005227 376 NFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQG---EKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 451 (707)
Q Consensus 376 ~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~---~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E 451 (707)
.|...+.||.|+||.||-|+. ++.++||||++....... -.++..|++.|++++|||++.+.|+|-.+...|||||
T Consensus 27 lf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVME 106 (948)
T KOG0577|consen 27 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVME 106 (948)
T ss_pred HHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHH
Confidence 355678899999999999995 578999999997644333 3578999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCC
Q 005227 452 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 531 (707)
Q Consensus 452 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 531 (707)
|| -|+-.|++.-. ..++.+..+..|+.+.+.||+|||+.+ .||||||+.|||+++.|.||++|||.|....+
T Consensus 107 YC-lGSAsDlleVh-kKplqEvEIAAi~~gaL~gLaYLHS~~---~IHRDiKAGNILLse~g~VKLaDFGSAsi~~P--- 178 (948)
T KOG0577|consen 107 YC-LGSASDLLEVH-KKPLQEVEIAAITHGALQGLAYLHSHN---RIHRDIKAGNILLSEPGLVKLADFGSASIMAP--- 178 (948)
T ss_pred HH-hccHHHHHHHH-hccchHHHHHHHHHHHHHHHHHHHHhh---HHhhhccccceEecCCCeeeeccccchhhcCc---
Confidence 99 56988988654 457999999999999999999999999 99999999999999999999999999987543
Q ss_pred CCccccceecccccCCCccchhhhc---cCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccC
Q 005227 532 EGIVPAHVSTVVKGTPGYLDPEYFL---THKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDG 608 (707)
Q Consensus 532 ~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 608 (707)
....+||+.|||||++. .+.|+-++||||+|++..||.-.++|++...-... ++.+...
T Consensus 179 --------AnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSA----------LYHIAQN 240 (948)
T KOG0577|consen 179 --------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA----------LYHIAQN 240 (948)
T ss_pred --------hhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHH----------HHHHHhc
Confidence 34578999999999986 37899999999999999999999999875443222 2333333
Q ss_pred CCCC-CChHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005227 609 NMGS-YPSECVEKFIKLALKCCQDETDARPSMSEVMR 644 (707)
Q Consensus 609 ~~~~-~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~ 644 (707)
.-+. ...++++.+..++..|+++-|.+|||..++++
T Consensus 241 esPtLqs~eWS~~F~~Fvd~CLqKipqeRptse~ll~ 277 (948)
T KOG0577|consen 241 ESPTLQSNEWSDYFRNFVDSCLQKIPQERPTSEELLK 277 (948)
T ss_pred CCCCCCCchhHHHHHHHHHHHHhhCcccCCcHHHHhh
Confidence 3333 24578889999999999999999999887654
No 246
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=3.4e-36 Score=311.66 Aligned_cols=249 Identities=30% Similarity=0.485 Sum_probs=198.3
Q ss_pred ceEeeeCceEEEEEEeC-CCc--EEEEEEeccCC-hhhHHHHHHHHHHHHcc-CCCcceeEEEEEEeCCeEEEEEecCCC
Q 005227 381 TQIGQGGYGKVYKGILP-DGT--VVAVKRAQEGS-LQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQMLVYEFMSN 455 (707)
Q Consensus 381 ~~lG~G~fg~Vy~~~~~-~~~--~vavK~l~~~~-~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lV~E~~~~ 455 (707)
+.||+|+||.||+|.++ ++. .+|+|.+.... ....+.+.+|+++++++ +||||+++++++...+..++||||+++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH 80 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCC
Confidence 36899999999999975 443 47888887533 33456788999999999 799999999999999999999999999
Q ss_pred CCHHHHHhhcC--------------CCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeec
Q 005227 456 GTLRDQLSAKS--------------KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFG 521 (707)
Q Consensus 456 gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFG 521 (707)
|+|.+++.... ...+++..++.++.|++.||+|||+.+ ++||||||+||++++++.+||+|||
T Consensus 81 ~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~---i~H~dikp~nili~~~~~~kl~dfg 157 (270)
T cd05047 81 GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRDLAARNILVGENYVAKIADFG 157 (270)
T ss_pred CcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccccceEEEcCCCeEEECCCC
Confidence 99999997532 124789999999999999999999988 9999999999999999999999999
Q ss_pred ccccCCCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHhhcc
Q 005227 522 LSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSS 600 (707)
Q Consensus 522 la~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~ellt-G~~pf~~~~~~~~~~~~~~~~~ 600 (707)
++...... ........+..|+|||++....++.++|||||||++|||++ |..||..... .+.....
T Consensus 158 l~~~~~~~--------~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~-~~~~~~~---- 224 (270)
T cd05047 158 LSRGQEVY--------VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC-AELYEKL---- 224 (270)
T ss_pred Cccccchh--------hhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCH-HHHHHHH----
Confidence 98632210 01111223567999999998999999999999999999997 9999864332 1111111
Q ss_pred cchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhh
Q 005227 601 MMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIW 650 (707)
Q Consensus 601 ~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~ 650 (707)
..+.....+..+...+.+++.+||+.+|.+||++.+++..|+.++
T Consensus 225 -----~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~ 269 (270)
T cd05047 225 -----PQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 269 (270)
T ss_pred -----hCCCCCCCCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence 111112233445677899999999999999999999999998764
No 247
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=3.1e-36 Score=314.44 Aligned_cols=267 Identities=25% Similarity=0.414 Sum_probs=205.5
Q ss_pred cCCCccceEeeeCceEEEEEEe-----CCCcEEEEEEeccCC-hhhHHHHHHHHHHHHccCCCcceeEEEEEEeC--CeE
Q 005227 375 NNFNSSTQIGQGGYGKVYKGIL-----PDGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE--GEQ 446 (707)
Q Consensus 375 ~~~~~~~~lG~G~fg~Vy~~~~-----~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~--~~~ 446 (707)
..|++.+.||+|+||.||.+.. .+++.||+|.+.... ....+.+.+|+++++.++|+||+++++++... ...
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (284)
T cd05079 4 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI 83 (284)
T ss_pred hhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCce
Confidence 3467889999999999999984 257889999987543 33346789999999999999999999998775 568
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccC
Q 005227 447 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 526 (707)
Q Consensus 447 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~ 526 (707)
++||||+++++|.+++.+.. ..+++..+..++.|++.||+|||+.+ ++||||||+||++++++.+||+|||+++..
T Consensus 84 ~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~i~~~i~~aL~~lH~~g---i~H~dlkp~Nil~~~~~~~~l~dfg~~~~~ 159 (284)
T cd05079 84 KLIMEFLPSGSLKEYLPRNK-NKINLKQQLKYAVQICKGMDYLGSRQ---YVHRDLAARNVLVESEHQVKIGDFGLTKAI 159 (284)
T ss_pred EEEEEccCCCCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCC---eeecccchheEEEcCCCCEEECCCcccccc
Confidence 99999999999999996543 35899999999999999999999998 999999999999999999999999999865
Q ss_pred CCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHH----HHhh-ccc
Q 005227 527 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVN----IAYQ-SSM 601 (707)
Q Consensus 527 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~----~~~~-~~~ 601 (707)
...... ........++..|+|||++.+..++.++|||||||++|||++++.|............ .... ...
T Consensus 160 ~~~~~~----~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (284)
T cd05079 160 ETDKEY----YTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRL 235 (284)
T ss_pred ccCccc----eeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHH
Confidence 432210 1112234567789999999988999999999999999999998776532111000000 0000 000
Q ss_pred chhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 005227 602 MFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 649 (707)
Q Consensus 602 ~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~ 649 (707)
......+...+.+..++..+.+++.+|++.+|++||++.++++.++.+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 236 VRVLEEGKRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred HHHHHcCccCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 001111222223445678899999999999999999999999998865
No 248
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2e-37 Score=302.61 Aligned_cols=286 Identities=20% Similarity=0.329 Sum_probs=216.4
Q ss_pred cHHHHHHHhcCCCccceEeeeCceEEEEEE-eCCCcEEEEEEeccCChhhHHHHHHHHHHHHcc-CCCcceeEEEEEEeC
Q 005227 366 TYGEMALATNNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEE 443 (707)
Q Consensus 366 ~~~~l~~~~~~~~~~~~lG~G~fg~Vy~~~-~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~ 443 (707)
+++|+...+ .+.||+|+|+.|-.++ +.+|..+|||++.+.....++++.+|++++.+. .|+||+.++++|+++
T Consensus 74 ~F~d~YkLt-----~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd 148 (463)
T KOG0607|consen 74 KFEDMYKLT-----SELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDD 148 (463)
T ss_pred hHHHHHHhH-----HHHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhccc
Confidence 467777776 5789999999999998 679999999999887777788999999999998 599999999999999
Q ss_pred CeEEEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCC---cEEEeee
Q 005227 444 GEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKF---TAKVADF 520 (707)
Q Consensus 444 ~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~---~~kl~DF 520 (707)
...|||||-|.||+|...++++ ..+++.++.++.++|+.||.|||.++ |.|||+||+|||-.+.. -+||+||
T Consensus 149 ~~FYLVfEKm~GGplLshI~~~--~~F~E~EAs~vvkdia~aLdFlH~kg---IAHRDlKPENiLC~~pn~vsPvKiCDf 223 (463)
T KOG0607|consen 149 TRFYLVFEKMRGGPLLSHIQKR--KHFNEREASRVVKDIASALDFLHTKG---IAHRDLKPENILCESPNKVSPVKICDF 223 (463)
T ss_pred ceEEEEEecccCchHHHHHHHh--hhccHHHHHHHHHHHHHHHHHHhhcC---cccccCCccceeecCCCCcCceeeecc
Confidence 9999999999999999999664 35999999999999999999999999 99999999999996544 4899999
Q ss_pred cccccCCCCCCCCccccceecccccCCCccchhhhc-----cCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHH
Q 005227 521 GLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFL-----THKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNI 595 (707)
Q Consensus 521 Gla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~ 595 (707)
.+..-..................+|+..|||||+.. ...|+.+.|.||+|||+|-|++|..||...-...-
T Consensus 224 DLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dC---- 299 (463)
T KOG0607|consen 224 DLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADC---- 299 (463)
T ss_pred ccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcC----
Confidence 887644322211122233345678999999999874 35688999999999999999999999964322000
Q ss_pred HhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCC
Q 005227 596 AYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETP 675 (707)
Q Consensus 596 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R 675 (707)
.|. +++.-..|-..+++-+..=--.-|++- ....+..+.|++..+|..|+..|
T Consensus 300 GWd-----------rGe~Cr~CQ~~LFesIQEGkYeFPdkd----------------WahIS~eakdlisnLlvrda~~r 352 (463)
T KOG0607|consen 300 GWD-----------RGEVCRVCQNKLFESIQEGKYEFPDKD----------------WAHISSEAKDLISNLLVRDAKQR 352 (463)
T ss_pred Ccc-----------CCCccHHHHHHHHHHHhccCCcCChhh----------------hHHhhHHHHHHHHHHHhccHHhh
Confidence 000 111222333333332221111111110 01112344588999999999999
Q ss_pred CCCCcCCCCCCCCCCCC
Q 005227 676 PSSSSMLKHPYVSSDVS 692 (707)
Q Consensus 676 ~sa~e~L~Hp~f~~~~~ 692 (707)
.+|.+.++|||+.+-..
T Consensus 353 lsa~~vlnhPw~~~~~~ 369 (463)
T KOG0607|consen 353 LSAAQVLNHPWVQRCAP 369 (463)
T ss_pred hhhhhccCCccccccch
Confidence 99999999999977544
No 249
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=8.8e-38 Score=331.69 Aligned_cols=250 Identities=26% Similarity=0.460 Sum_probs=196.3
Q ss_pred cceEeeeCceEEEEEEeC-CCcEEEEEEec---c-CChhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCe--EEEEEec
Q 005227 380 STQIGQGGYGKVYKGILP-DGTVVAVKRAQ---E-GSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGE--QMLVYEF 452 (707)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~---~-~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~--~~lV~E~ 452 (707)
.++||+|+|-+||+|.+. +|-.||---++ . ......++|..|+.+|+.|+|+||+++|+++.+... ..+|+|.
T Consensus 45 ~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTEL 124 (632)
T KOG0584|consen 45 DEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITEL 124 (632)
T ss_pred hhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeeec
Confidence 567999999999999975 57677632222 1 123345789999999999999999999999976654 7889999
Q ss_pred CCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcC-CCcEEEeeecccccCCCCCC
Q 005227 453 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDH-KFTAKVADFGLSRLAPVPDI 531 (707)
Q Consensus 453 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~-~~~~kl~DFGla~~~~~~~~ 531 (707)
|..|+|..|+++.++ .+...++.|++||++||.|||++ .|||||||||-+||+|+. .|.|||+|+|+|......
T Consensus 125 ~TSGtLr~Y~kk~~~--vn~kaik~W~RQILkGL~yLHs~-~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s-- 199 (632)
T KOG0584|consen 125 FTSGTLREYRKKHRR--VNIKAIKSWCRQILKGLVYLHSQ-DPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKS-- 199 (632)
T ss_pred ccCCcHHHHHHHhcc--CCHHHHHHHHHHHHHHhhhhhcC-CCCccccccccceEEEcCCcCceeecchhHHHHhhcc--
Confidence 999999999987654 78889999999999999999997 589999999999999974 589999999999887532
Q ss_pred CCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCCCC
Q 005227 532 EGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 611 (707)
Q Consensus 532 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 611 (707)
......|||.|||||+.. ..|++.+||||||+.|+||+|+..||..-.+..+.++.. ..+..+
T Consensus 200 -------~aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV---------~SGiKP 262 (632)
T KOG0584|consen 200 -------HAKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKV---------TSGIKP 262 (632)
T ss_pred -------ccceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHH---------HcCCCH
Confidence 233478999999999987 889999999999999999999999997655543332221 111110
Q ss_pred CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCCCCCCCCCC
Q 005227 612 SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSSD 690 (707)
Q Consensus 612 ~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f~~~ 690 (707)
. . |. .-.+++..+||.+||.. .++|+||.|+|.||||+.+
T Consensus 263 ~-------s-------------------------l~------kV~dPevr~fIekCl~~-~~~R~sa~eLL~d~Ff~~d 302 (632)
T KOG0584|consen 263 A-------A-------------------------LS------KVKDPEVREFIEKCLAT-KSERLSAKELLKDPFFDED 302 (632)
T ss_pred H-------H-------------------------hh------ccCCHHHHHHHHHHhcC-chhccCHHHHhhChhhccc
Confidence 0 0 00 11234445677777777 8888888888888888876
No 250
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=5.1e-36 Score=314.73 Aligned_cols=263 Identities=27% Similarity=0.410 Sum_probs=203.8
Q ss_pred hcCCCccceEeeeCceEEEEEEeC-----------------CCcEEEEEEeccCC-hhhHHHHHHHHHHHHccCCCccee
Q 005227 374 TNNFNSSTQIGQGGYGKVYKGILP-----------------DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVS 435 (707)
Q Consensus 374 ~~~~~~~~~lG~G~fg~Vy~~~~~-----------------~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~nIv~ 435 (707)
.++|++.+.||+|+||.||++... ++..||+|++.... ......+.+|+++++.++|+||++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~ 83 (296)
T cd05095 4 RKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIR 83 (296)
T ss_pred hhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcce
Confidence 357899999999999999998532 24579999987543 233567999999999999999999
Q ss_pred EEEEEEeCCeEEEEEecCCCCCHHHHHhhcCC---------CCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCC
Q 005227 436 LVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSK---------EPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASN 506 (707)
Q Consensus 436 l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~---------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~N 506 (707)
+++++...+..++||||+++++|.+++..... ..+++..+..++.|++.||+|||+.+ ++||||||+|
T Consensus 84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~---i~H~dlkp~N 160 (296)
T cd05095 84 LLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLN---FVHRDLATRN 160 (296)
T ss_pred EEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCC---eecccCChhe
Confidence 99999999999999999999999999976321 24678899999999999999999998 9999999999
Q ss_pred EEEcCCCcEEEeeecccccCCCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc--CCCCCC
Q 005227 507 ILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT--GMQPIS 584 (707)
Q Consensus 507 ILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~ellt--G~~pf~ 584 (707)
|++++++.++|+|||+++....... ........++..|+|||+..++.++.++|||||||++|||++ |..||.
T Consensus 161 ili~~~~~~~l~dfg~~~~~~~~~~-----~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~ 235 (296)
T cd05095 161 CLVGKNYTIKIADFGMSRNLYSGDY-----YRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYS 235 (296)
T ss_pred EEEcCCCCEEeccCcccccccCCcc-----eeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCcc
Confidence 9999999999999999976533211 011122334678999999988899999999999999999998 677886
Q ss_pred CCchhHHHHHHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 005227 585 HGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELE 647 (707)
Q Consensus 585 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~ 647 (707)
..... +...... ..............+..++..+.+++.+||+.+|++||++.++.+.|+
T Consensus 236 ~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~ 295 (296)
T cd05095 236 QLSDE-QVIENTG--EFFRDQGRQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLL 295 (296)
T ss_pred ccChH-HHHHHHH--HHHhhccccccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 43321 1111000 000000001111223446688999999999999999999999998875
No 251
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=4.1e-36 Score=308.45 Aligned_cols=248 Identities=35% Similarity=0.545 Sum_probs=206.3
Q ss_pred ceEeeeCceEEEEEEeCC----CcEEEEEEeccCChhh-HHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEecCCC
Q 005227 381 TQIGQGGYGKVYKGILPD----GTVVAVKRAQEGSLQG-EKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSN 455 (707)
Q Consensus 381 ~~lG~G~fg~Vy~~~~~~----~~~vavK~l~~~~~~~-~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~ 455 (707)
+.||+|+||.||+|.... +..||+|.+....... .+.+.+|++.++.++|+||+++++++......++||||+++
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG 80 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccC
Confidence 469999999999999753 7899999998654433 57889999999999999999999999999999999999999
Q ss_pred CCHHHHHhhcC-------CCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCC
Q 005227 456 GTLRDQLSAKS-------KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 528 (707)
Q Consensus 456 gsL~~~l~~~~-------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~ 528 (707)
++|.+++.... ...+++..++.++.|+++||+|||+.+ ++|+||||+||++++++.+||+|||.+.....
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~---i~H~di~p~nili~~~~~~~l~dfg~~~~~~~ 157 (262)
T cd00192 81 GDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKK---FVHRDLAARNCLVGEDLVVKISDFGLSRDVYD 157 (262)
T ss_pred CcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCC---cccCccCcceEEECCCCcEEEccccccccccc
Confidence 99999997642 356899999999999999999999998 99999999999999999999999999987653
Q ss_pred CCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHhhcccchhhcc
Q 005227 529 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVID 607 (707)
Q Consensus 529 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 607 (707)
... ........++..|+|||.+....++.++||||+||++|||++ |..||...... +... .+..
T Consensus 158 ~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~-~~~~---------~~~~ 222 (262)
T cd00192 158 DDY-----YRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNE-EVLE---------YLRK 222 (262)
T ss_pred ccc-----cccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHH-HHHH---------HHHc
Confidence 321 112233456889999999998899999999999999999999 69998755321 1111 1112
Q ss_pred CCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 005227 608 GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMREL 646 (707)
Q Consensus 608 ~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L 646 (707)
+.....+..++..+.+++.+|++.+|++||++.++++.|
T Consensus 223 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l 261 (262)
T cd00192 223 GYRLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVERL 261 (262)
T ss_pred CCCCCCCccCChHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence 233345566678899999999999999999999998876
No 252
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=9.5e-37 Score=321.01 Aligned_cols=276 Identities=26% Similarity=0.338 Sum_probs=208.6
Q ss_pred HHhcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCCh--hhHHHHHHHHHHHHccCCCcceeEEEEEEeCC----
Q 005227 372 LATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG---- 444 (707)
Q Consensus 372 ~~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~---- 444 (707)
...++|++.+.||+|+||.||+|..+ +++.||+|++..... .....+.+|++++++++||||+++++++.+..
T Consensus 4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~ 83 (302)
T cd07864 4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALD 83 (302)
T ss_pred hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhh
Confidence 45678999999999999999999975 689999999875332 22356788999999999999999999986654
Q ss_pred ------eEEEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEe
Q 005227 445 ------EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVA 518 (707)
Q Consensus 445 ------~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~ 518 (707)
..++|+||+++ ++.+.+... ...+++..++.++.|++.||+|||+.+ |+|+||||+||++++++.+||+
T Consensus 84 ~~~~~~~~~lv~e~~~~-~l~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~---i~H~dl~p~nili~~~~~~kl~ 158 (302)
T cd07864 84 FKKDKGAFYLVFEYMDH-DLMGLLESG-LVHFSEDHIKSFMKQLLEGLNYCHKKN---FLHRDIKCSNILLNNKGQIKLA 158 (302)
T ss_pred ccccCCcEEEEEcccCc-cHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCcEEeC
Confidence 78999999975 777777554 346899999999999999999999998 9999999999999999999999
Q ss_pred eecccccCCCCCCCCccccceecccccCCCccchhhhcc-CCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHh
Q 005227 519 DFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAY 597 (707)
Q Consensus 519 DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~ 597 (707)
|||++........ .......++..|+|||.+.+ ..++.++|||||||++|||++|+.||......
T Consensus 159 dfg~~~~~~~~~~------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~-------- 224 (302)
T cd07864 159 DFGLARLYNSEES------RPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQEL-------- 224 (302)
T ss_pred cccccccccCCcc------cccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChH--------
Confidence 9999986543221 11122345778999998865 45788999999999999999999998643321
Q ss_pred hcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH---------HHHhhhcCCCCCCCCCccccCCC
Q 005227 598 QSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRE---------LESIWNMMPESDTKTPEFINSEH 668 (707)
Q Consensus 598 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~---------L~~~~~~~~~~~~~~~dll~~~L 668 (707)
..+..+...|....+..+|.+.+.... ................+++.+||
T Consensus 225 ---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l 283 (302)
T cd07864 225 ---------------------AQLELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHML 283 (302)
T ss_pred ---------------------HHHHHHHHHhCCCChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHc
Confidence 112222233333333333333221100 00111122223455678999999
Q ss_pred CCCCCCCCCCCcCCCCCCC
Q 005227 669 TSKEETPPSSSSMLKHPYV 687 (707)
Q Consensus 669 ~~dP~~R~sa~e~L~Hp~f 687 (707)
..||++|||+++++.||||
T Consensus 284 ~~~P~~Rp~~~~il~~~~~ 302 (302)
T cd07864 284 TLDPSKRCTAEEALNSPWL 302 (302)
T ss_pred cCChhhCCCHHHHhcCCCC
Confidence 9999999999999999997
No 253
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=3.7e-36 Score=310.06 Aligned_cols=239 Identities=21% Similarity=0.370 Sum_probs=189.7
Q ss_pred ceEeeeCceEEEEEEeCC-------------CcEEEEEEeccCChhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEE
Q 005227 381 TQIGQGGYGKVYKGILPD-------------GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQM 447 (707)
Q Consensus 381 ~~lG~G~fg~Vy~~~~~~-------------~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~ 447 (707)
+.||+|+||.||+|.+.+ ...||+|.+..........+.+|+.+++.++||||+++++++......+
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~ 80 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENI 80 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCE
Confidence 468999999999998532 2358999887655444567889999999999999999999999999999
Q ss_pred EEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCc-------EEEeee
Q 005227 448 LVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFT-------AKVADF 520 (707)
Q Consensus 448 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~-------~kl~DF 520 (707)
+||||+++++|..++.... ..+++..++.++.||++||+|||+.+ |+||||||+|||++.++. +|++||
T Consensus 81 lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~ 156 (262)
T cd05077 81 MVEEFVEFGPLDLFMHRKS-DVLTTPWKFKVAKQLASALSYLEDKD---LVHGNVCTKNILLAREGIDGECGPFIKLSDP 156 (262)
T ss_pred EEEecccCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHhhhCC---eECCCCCcccEEEecCCccCCCCceeEeCCC
Confidence 9999999999999886543 45899999999999999999999998 999999999999987664 899999
Q ss_pred cccccCCCCCCCCccccceecccccCCCccchhhhc-cCCCCCchhhHHHHHHHHHHH-cCCCCCCCCchhHHHHHHHhh
Q 005227 521 GLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFL-THKLTDKSDVYSLGVVFLELL-TGMQPISHGKNIVREVNIAYQ 598 (707)
Q Consensus 521 Gla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~s~~sDVwSlGvll~ell-tG~~pf~~~~~~~~~~~~~~~ 598 (707)
|++...... ....++..|+|||++. +..++.++|||||||++|||+ +|..||...... +. .....
T Consensus 157 g~~~~~~~~-----------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~-~~-~~~~~ 223 (262)
T cd05077 157 GIPITVLSR-----------QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLA-EK-ERFYE 223 (262)
T ss_pred CCCccccCc-----------ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchh-HH-HHHHh
Confidence 998654321 1235778899999987 467899999999999999998 587877543221 11 11000
Q ss_pred cccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 005227 599 SSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMREL 646 (707)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L 646 (707)
... .........+.+++.+||+.+|++||++.++++.+
T Consensus 224 ---------~~~-~~~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~ 261 (262)
T cd05077 224 ---------GQC-MLVTPSCKELADLMTHCMNYDPNQRPFFRAIMRDI 261 (262)
T ss_pred ---------cCc-cCCCCChHHHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence 000 11122346788999999999999999999998765
No 254
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=2.1e-36 Score=312.82 Aligned_cols=254 Identities=21% Similarity=0.316 Sum_probs=195.2
Q ss_pred HHHHHhcCCCccceE--eeeCceEEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHcc-CCCcceeEEEEEEeCC
Q 005227 369 EMALATNNFNSSTQI--GQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEG 444 (707)
Q Consensus 369 ~l~~~~~~~~~~~~l--G~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~ 444 (707)
+.....++|++.+.+ |+|+||.||++..+ +++.+|+|.......... |+.....+ +|+||+++++++...+
T Consensus 8 ~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~-----e~~~~~~~~~h~~iv~~~~~~~~~~ 82 (267)
T PHA03390 8 ELVQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNAI-----EPMVHQLMKDNPNFIKLYYSVTTLK 82 (267)
T ss_pred HHHHHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcchh-----hHHHHHHhhcCCCEEEEEEEEecCC
Confidence 344445677777776 99999999999964 788999999865322211 22222222 7999999999999999
Q ss_pred eEEEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCC-cEEEeeeccc
Q 005227 445 EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKF-TAKVADFGLS 523 (707)
Q Consensus 445 ~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~-~~kl~DFGla 523 (707)
..++||||+++++|.+++.... .+++..++.++.|+++||.|||+.+ ++||||||+||+++.++ .++|+|||++
T Consensus 83 ~~~iv~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~~~l~dfg~~ 157 (267)
T PHA03390 83 GHVLIMDYIKDGDLFDLLKKEG--KLSEAEVKKIIRQLVEALNDLHKHN---IIHNDIKLENVLYDRAKDRIYLCDYGLC 157 (267)
T ss_pred eeEEEEEcCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEEeCCCCeEEEecCccc
Confidence 9999999999999999997653 6999999999999999999999998 99999999999999998 9999999998
Q ss_pred ccCCCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccch
Q 005227 524 RLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMF 603 (707)
Q Consensus 524 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~ 603 (707)
+..... ....++..|+|||++.+..++.++|||||||++|||++|+.||.......-
T Consensus 158 ~~~~~~-----------~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~------------ 214 (267)
T PHA03390 158 KIIGTP-----------SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEEL------------ 214 (267)
T ss_pred eecCCC-----------ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchh------------
Confidence 765321 123578899999999999999999999999999999999999963321100
Q ss_pred hhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCC-CcCC
Q 005227 604 SVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSS-SSML 682 (707)
Q Consensus 604 ~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa-~e~L 682 (707)
....+. .+....+ ...+..+..+.+||.+||+.+|++|+++ +|+|
T Consensus 215 -------------~~~~~~----~~~~~~~-----------------~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l 260 (267)
T PHA03390 215 -------------DLESLL----KRQQKKL-----------------PFIKNVSKNANDFVQSMLKYNINYRLTNYNEII 260 (267)
T ss_pred -------------hHHHHH----HhhcccC-----------------CcccccCHHHHHHHHHHhccChhhCCchHHHHh
Confidence 000000 0010000 0011233445689999999999999975 9999
Q ss_pred CCCCCCC
Q 005227 683 KHPYVSS 689 (707)
Q Consensus 683 ~Hp~f~~ 689 (707)
+||||..
T Consensus 261 ~h~~~~~ 267 (267)
T PHA03390 261 KHPFLKI 267 (267)
T ss_pred cCCcccC
Confidence 9999963
No 255
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=8.9e-36 Score=307.46 Aligned_cols=205 Identities=28% Similarity=0.505 Sum_probs=174.2
Q ss_pred CCCccceEeeeCceEEEEEEeCCCcEEEEEEeccCCh------hhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEE
Q 005227 376 NFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSL------QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 449 (707)
Q Consensus 376 ~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~------~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV 449 (707)
+|+..+.||+|+||+||+|...+++.+|+|.+..... .....+.+|++++++++|+||+++++++.+.+..++|
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 80 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIF 80 (265)
T ss_pred CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEE
Confidence 4778899999999999999988899999998864321 1234688999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCC
Q 005227 450 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 529 (707)
Q Consensus 450 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~ 529 (707)
|||+++++|.+++.+. ..+++..+..++.|++.||+|||+.+ |+|+||+|+||++++++.++|+|||++......
T Consensus 81 ~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~ 155 (265)
T cd06631 81 MEFVPGGSISSILNRF--GPLPEPVFCKYTKQILDGVAYLHNNC---VVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWV 155 (265)
T ss_pred EecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCcCHHhEEECCCCeEEeccchhhHhhhhc
Confidence 9999999999999654 35889999999999999999999998 999999999999999999999999998765321
Q ss_pred CCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCC
Q 005227 530 DIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 586 (707)
Q Consensus 530 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~ 586 (707)
..... .........|+..|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 156 ~~~~~-~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~ 211 (265)
T cd06631 156 GLHGT-HSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASM 211 (265)
T ss_pred ccccc-ccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccC
Confidence 11110 011123346889999999999989999999999999999999999999643
No 256
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=7.6e-36 Score=311.05 Aligned_cols=199 Identities=27% Similarity=0.422 Sum_probs=172.0
Q ss_pred CCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEecCCC
Q 005227 377 FNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSN 455 (707)
Q Consensus 377 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~ 455 (707)
|++.+.||+|+||.||+|... ++..+++|.+........+.+.+|+++++.++|+||+++++++...+..++||||+++
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~ 86 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAG 86 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecCC
Confidence 567888999999999999975 5788999998766555567789999999999999999999999999999999999999
Q ss_pred CCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCCCcc
Q 005227 456 GTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIV 535 (707)
Q Consensus 456 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 535 (707)
++|.+++... ..++++..+..++.|+++||+|||+.+ ++||||||+||+++.++.+||+|||++.......
T Consensus 87 ~~l~~~~~~~-~~~l~~~~~~~~~~qi~~~L~~LH~~~---i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~----- 157 (282)
T cd06643 87 GAVDAVMLEL-ERPLTEPQIRVVCKQTLEALNYLHENK---IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTI----- 157 (282)
T ss_pred CcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCcccEEEccCCCEEEccccccccccccc-----
Confidence 9999988653 346899999999999999999999998 9999999999999999999999999987543211
Q ss_pred ccceecccccCCCccchhhhc-----cCCCCCchhhHHHHHHHHHHHcCCCCCCCC
Q 005227 536 PAHVSTVVKGTPGYLDPEYFL-----THKLTDKSDVYSLGVVFLELLTGMQPISHG 586 (707)
Q Consensus 536 ~~~~~~~~~gt~~y~aPE~~~-----~~~~s~~sDVwSlGvll~elltG~~pf~~~ 586 (707)
.......++..|+|||++. +..++.++|||||||++|||++|+.||...
T Consensus 158 --~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~ 211 (282)
T cd06643 158 --QRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHEL 211 (282)
T ss_pred --cccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCcccc
Confidence 1123346889999999984 356788999999999999999999998643
No 257
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=6.8e-36 Score=308.61 Aligned_cols=205 Identities=27% Similarity=0.481 Sum_probs=173.0
Q ss_pred CCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCChh---------hHHHHHHHHHHHHccCCCcceeEEEEEEeCCe
Q 005227 376 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ---------GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGE 445 (707)
Q Consensus 376 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~---------~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~ 445 (707)
+|.....||+|+||.||+|... +++.||+|.+...... ..+.+.+|+.++++++||||+++++++...+.
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 80 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADH 80 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCc
Confidence 4677889999999999999964 6889999988643221 12468899999999999999999999999999
Q ss_pred EEEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeeccccc
Q 005227 446 QMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRL 525 (707)
Q Consensus 446 ~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~ 525 (707)
.++||||+++++|.+++... ..+++..+..++.|++.||+|||+.+ ++||||+|+||++++++.+||+|||.++.
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~~l~~~l~~lH~~~---ivH~di~p~nil~~~~~~~~l~dfg~~~~ 155 (267)
T cd06628 81 LNIFLEYVPGGSVAALLNNY--GAFEETLVRNFVRQILKGLNYLHNRG---IIHRDIKGANILVDNKGGIKISDFGISKK 155 (267)
T ss_pred cEEEEEecCCCCHHHHHHhc--cCccHHHHHHHHHHHHHHHHHHHhcC---cccccCCHHHEEEcCCCCEEecccCCCcc
Confidence 99999999999999999654 45889999999999999999999998 99999999999999999999999999986
Q ss_pred CCCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCC
Q 005227 526 APVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 586 (707)
Q Consensus 526 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~ 586 (707)
......... .........|+..|+|||.+.+..++.++|||||||++|||++|+.||...
T Consensus 156 ~~~~~~~~~-~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~ 215 (267)
T cd06628 156 LEANSLSTK-TNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDC 215 (267)
T ss_pred cccccccCC-ccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCc
Confidence 643211110 011122345788999999999989999999999999999999999999754
No 258
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-38 Score=309.00 Aligned_cols=271 Identities=23% Similarity=0.324 Sum_probs=217.3
Q ss_pred hcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCChhhHHH---HHHHHHHHHccCCCcceeEEEEEEeCCeEEEE
Q 005227 374 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKE---FLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 449 (707)
Q Consensus 374 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~---~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV 449 (707)
.++|+..++||+|.||.|.+++-+ +++.+|+|++++.......+ -..|-++|+..+||.+..+--.|+..+..|+|
T Consensus 167 m~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFV 246 (516)
T KOG0690|consen 167 MEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFV 246 (516)
T ss_pred cchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEE
Confidence 457888999999999999999965 79999999998765444433 35688999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCC
Q 005227 450 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 529 (707)
Q Consensus 450 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~ 529 (707)
|||..||.|.-+|.+ ...+++...+.+-..|..||.|||+++ ||.||+|.+|.|+|.+|++||+|||+++.-
T Consensus 247 MeyanGGeLf~HLsr--er~FsE~RtRFYGaEIvsAL~YLHs~~---ivYRDlKLENLlLDkDGHIKitDFGLCKE~--- 318 (516)
T KOG0690|consen 247 MEYANGGELFFHLSR--ERVFSEDRTRFYGAEIVSALGYLHSRN---IVYRDLKLENLLLDKDGHIKITDFGLCKEE--- 318 (516)
T ss_pred EEEccCceEeeehhh--hhcccchhhhhhhHHHHHHhhhhhhCC---eeeeechhhhheeccCCceEeeecccchhc---
Confidence 999999999988855 445899999999999999999999998 999999999999999999999999999742
Q ss_pred CCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCC
Q 005227 530 DIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGN 609 (707)
Q Consensus 530 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 609 (707)
+.........+||+.|.|||++....|..++|.|.+||+||||++|+.||...+.
T Consensus 319 ----I~~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh--------------------- 373 (516)
T KOG0690|consen 319 ----IKYGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDH--------------------- 373 (516)
T ss_pred ----ccccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccch---------------------
Confidence 2234566788999999999999999999999999999999999999999964322
Q ss_pred CCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCC-----CCcCCCC
Q 005227 610 MGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPS-----SSSMLKH 684 (707)
Q Consensus 610 ~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~s-----a~e~L~H 684 (707)
+.+.+++..|--.-| ...++++..++..+|..||.+|+- |.|+.+|
T Consensus 374 ---------~kLFeLIl~ed~kFP--------------------r~ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~h 424 (516)
T KOG0690|consen 374 ---------EKLFELILMEDLKFP--------------------RTLSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMRH 424 (516)
T ss_pred ---------hHHHHHHHhhhccCC--------------------ccCCHHHHHHHHHHhhcChHhhcCCCchhHHHHHhh
Confidence 234444443322222 122334456777778888888854 5788889
Q ss_pred CCCCCCCCCCCcccccCcccCC
Q 005227 685 PYVSSDVSGSNLVSGVIPTITP 706 (707)
Q Consensus 685 p~f~~~~~~~~~~~~~~~~~~~ 706 (707)
+||.+-.+..-.--.+.||++|
T Consensus 425 ~FF~~v~W~~~~~Kki~PPfKP 446 (516)
T KOG0690|consen 425 RFFASVDWEATYRKKIEPPFKP 446 (516)
T ss_pred hhhccCCHHHHHHhccCCCCCC
Confidence 9988876643333334555554
No 259
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-37 Score=318.47 Aligned_cols=256 Identities=21% Similarity=0.333 Sum_probs=210.8
Q ss_pred cCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCChhh--HHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEe
Q 005227 375 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQG--EKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 451 (707)
Q Consensus 375 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~--~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E 451 (707)
+-|+..+.||+|.|..|-+|++- +|..||||++.+..... ...+.+|++.|+.++|||||++|++......+|||+|
T Consensus 18 GLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLE 97 (864)
T KOG4717|consen 18 GLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILE 97 (864)
T ss_pred eeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEE
Confidence 35777889999999999999854 89999999998754433 4578999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEE-cCCCcEEEeeecccccCCCCC
Q 005227 452 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILL-DHKFTAKVADFGLSRLAPVPD 530 (707)
Q Consensus 452 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl-~~~~~~kl~DFGla~~~~~~~ 530 (707)
.-++|+|++|+-++. ..+.+....+++.||+.|+.|+|+.+ +|||||||+||.+ ..-|-+|++|||++..+.+
T Consensus 98 LGD~GDl~DyImKHe-~Gl~E~La~kYF~QI~~AI~YCHqLH---VVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~P-- 171 (864)
T KOG4717|consen 98 LGDGGDLFDYIMKHE-EGLNEDLAKKYFAQIVHAISYCHQLH---VVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQP-- 171 (864)
T ss_pred ecCCchHHHHHHhhh-ccccHHHHHHHHHHHHHHHHHHhhhh---hhcccCCcceeEEeeecCceEeeeccccccCCC--
Confidence 999999999997653 45999999999999999999999999 9999999999776 5678999999999976653
Q ss_pred CCCccccceecccccCCCccchhhhccCCCCC-chhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCC
Q 005227 531 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTD-KSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGN 609 (707)
Q Consensus 531 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~-~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 609 (707)
.......+|+..|-|||++.+..|+. ++||||+|||||-|++|+.||....+...
T Consensus 172 ------G~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSET------------------ 227 (864)
T KOG4717|consen 172 ------GKKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSET------------------ 227 (864)
T ss_pred ------cchhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhh------------------
Confidence 44567789999999999999998875 68999999999999999999976554211
Q ss_pred CCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCCCCCCCCC
Q 005227 610 MGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSS 689 (707)
Q Consensus 610 ~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f~~ 689 (707)
...+..|--.-| ...+++..|+|.+||.-||.+|.|.+|+..|+|+..
T Consensus 228 ------------LTmImDCKYtvP--------------------shvS~eCrdLI~sMLvRdPkkRAslEeI~s~~Wlq~ 275 (864)
T KOG4717|consen 228 ------------LTMIMDCKYTVP--------------------SHVSKECRDLIQSMLVRDPKKRASLEEIVSTSWLQA 275 (864)
T ss_pred ------------hhhhhcccccCc--------------------hhhhHHHHHHHHHHHhcCchhhccHHHHhccccccC
Confidence 112233322221 111233447888889999999999999999999876
Q ss_pred CCC
Q 005227 690 DVS 692 (707)
Q Consensus 690 ~~~ 692 (707)
...
T Consensus 276 ~D~ 278 (864)
T KOG4717|consen 276 GDR 278 (864)
T ss_pred CCC
Confidence 554
No 260
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=1.5e-36 Score=316.68 Aligned_cols=280 Identities=25% Similarity=0.365 Sum_probs=204.8
Q ss_pred CCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCC--hhhHHHHHHHHHHHHccCCCcceeEEEEEEeC--CeEEEEEe
Q 005227 377 FNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE--GEQMLVYE 451 (707)
Q Consensus 377 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~--~~~~lV~E 451 (707)
|++.+.||+|+||.||+|... +++.||+|++.... ......+.+|+++++.++|+|++++++++... +..++|||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 80 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE 80 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence 567889999999999999975 58999999998653 23345788999999999999999999999888 89999999
Q ss_pred cCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCC
Q 005227 452 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 531 (707)
Q Consensus 452 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 531 (707)
|++ ++|.+++.... ..+++..++.++.|+++||+|||+.+ ++|+||||+||++++++.+||+|||++........
T Consensus 81 ~~~-~~l~~~~~~~~-~~~~~~~~~~i~~~i~~al~~LH~~~---~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~ 155 (287)
T cd07840 81 YMD-HDLTGLLDSPE-VKFTESQIKCYMKQLLEGLQYLHSNG---ILHRDIKGSNILINNDGVLKLADFGLARPYTKRNS 155 (287)
T ss_pred ccc-ccHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCcHHHeEEcCCCCEEEccccceeeccCCCc
Confidence 997 48988886542 46899999999999999999999998 99999999999999999999999999986643321
Q ss_pred CCccccceecccccCCCccchhhhcc-CCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCCC
Q 005227 532 EGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 610 (707)
Q Consensus 532 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 610 (707)
.......++..|+|||.+.+ ..++.++||||||+++|||++|+.||..... .......... .
T Consensus 156 ------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~-~~~~~~~~~~----------~ 218 (287)
T cd07840 156 ------ADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTE-LEQLEKIFEL----------C 218 (287)
T ss_pred ------ccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCCh-HHHHHHHHHH----------h
Confidence 11223356788999998765 4678999999999999999999999965443 1111111100 0
Q ss_pred CCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCC-CCCCCCccccCCCCCCCCCCCCCCcCCCCCCC
Q 005227 611 GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPE-SDTKTPEFINSEHTSKEETPPSSSSMLKHPYV 687 (707)
Q Consensus 611 ~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~-~~~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f 687 (707)
..........+.++ +.......++..... +... +.. ......+++.+|+..+|++||+++++++||||
T Consensus 219 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~---~~~~---~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~~~~ 287 (287)
T cd07840 219 GSPTDENWPGVSKL---PWFENLKPKKPYKRR---LREF---FKHLIDPSALDLLDKLLTLDPKKRISADQALQHEYF 287 (287)
T ss_pred CCCchhhccccccc---hhhhhccccccchhH---HHHH---hcccCCHHHHHHHHHHcCCChhhCcCHHHHhhCcCC
Confidence 00000100100000 001111111111111 1111 111 24456789999999999999999999999998
No 261
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=1.6e-36 Score=318.64 Aligned_cols=194 Identities=26% Similarity=0.396 Sum_probs=170.3
Q ss_pred cceEeeeCceEEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEecCCCCCH
Q 005227 380 STQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTL 458 (707)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL 458 (707)
...||+|+||.||+|... +++.||+|.+........+.+.+|+.+++.++||||+++++++...+..++||||+++++|
T Consensus 26 ~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~~L 105 (297)
T cd06659 26 YIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGGAL 105 (297)
T ss_pred hhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCCCH
Confidence 457999999999999964 7899999998765545566788999999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCCCccccc
Q 005227 459 RDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAH 538 (707)
Q Consensus 459 ~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~ 538 (707)
.+++.. ..+++..++.++.|++.||+|||+.+ ++||||||+||+++.++.+||+|||++....... .
T Consensus 106 ~~~~~~---~~~~~~~~~~~~~qi~~~L~~LH~~~---ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~-------~ 172 (297)
T cd06659 106 TDIVSQ---TRLNEEQIATVCESVLQALCYLHSQG---VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDV-------P 172 (297)
T ss_pred HHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHeEEccCCcEEEeechhHhhccccc-------c
Confidence 998754 34899999999999999999999998 9999999999999999999999999987543221 1
Q ss_pred eecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCC
Q 005227 539 VSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 586 (707)
Q Consensus 539 ~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~ 586 (707)
......|+..|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 173 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~ 220 (297)
T cd06659 173 KRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSD 220 (297)
T ss_pred cccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 123356889999999999989999999999999999999999999643
No 262
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=2.9e-36 Score=314.29 Aligned_cols=278 Identities=26% Similarity=0.398 Sum_probs=205.7
Q ss_pred CCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCCh--hhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEecC
Q 005227 377 FNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 453 (707)
Q Consensus 377 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~ 453 (707)
|++.+.||.|++|.||+|... +|+.||+|++..... ...+.+.+|+++++.++|+|++++++++.+.+..++||||+
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~ 80 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFL 80 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEecc
Confidence 667899999999999999965 799999999875432 22356889999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCCC
Q 005227 454 SNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEG 533 (707)
Q Consensus 454 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 533 (707)
+ ++|.+++.......+++..++.++.|+++||+|||+.+ ++||||+|+||++++++.++|+|||+++......
T Consensus 81 ~-~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~---~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~--- 153 (283)
T cd07835 81 D-LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHR---VLHRDLKPQNLLIDREGALKLADFGLARAFGVPV--- 153 (283)
T ss_pred C-cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCHHHEEEcCCCcEEEeecccccccCCCc---
Confidence 5 69999997665556899999999999999999999988 9999999999999999999999999997653221
Q ss_pred ccccceecccccCCCccchhhhccC-CCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCCCCC
Q 005227 534 IVPAHVSTVVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGS 612 (707)
Q Consensus 534 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 612 (707)
.......++..|+|||++.+. .++.++||||||+++|||++|+.||........... .... ...
T Consensus 154 ----~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~-~~~~----------~~~ 218 (283)
T cd07835 154 ----RTYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFR-IFRT----------LGT 218 (283)
T ss_pred ----cccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH-HHHH----------hCC
Confidence 111223467899999988764 578899999999999999999999975544222111 1100 000
Q ss_pred CChHHHHHHHHHHHHhcccCCC-CCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCCCCCCC
Q 005227 613 YPSECVEKFIKLALKCCQDETD-ARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYV 687 (707)
Q Consensus 613 ~~~~~~~~l~~l~~~c~~~~p~-~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f 687 (707)
...........+.... ..-+. ..+.. ....+..+....+++.+|+..||++|||++|+++||||
T Consensus 219 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~----------~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~ 283 (283)
T cd07835 219 PDEDVWPGVTSLPDYK-PTFPKWARQDL----------SKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQHPYF 283 (283)
T ss_pred CChHHhhhhhhchhhh-hhcccccccch----------hhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcCCCC
Confidence 0111111111110000 00000 01111 11123334456689999999999999999999999998
No 263
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=1e-36 Score=318.29 Aligned_cols=279 Identities=25% Similarity=0.377 Sum_probs=206.4
Q ss_pred cCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCC--hhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEe
Q 005227 375 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 451 (707)
Q Consensus 375 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E 451 (707)
++|+..+.||+|+||.||+|..+ +++.||+|++.... ....+.+.+|++++++++|+||+++++++...+..++|||
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e 80 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFE 80 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEe
Confidence 36889999999999999999975 68899999886532 2234678999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCC
Q 005227 452 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 531 (707)
Q Consensus 452 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 531 (707)
|++++.+..+... ...+++..++.++.|++.||+|||+.+ ++|+||+|+||++++++.+||+|||++........
T Consensus 81 ~~~~~~l~~~~~~--~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~ 155 (288)
T cd07833 81 YVERTLLELLEAS--PGGLPPDAVRSYIWQLLQAIAYCHSHN---IIHRDIKPENILVSESGVLKLCDFGFARALRARPA 155 (288)
T ss_pred cCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCCEEEEeeecccccCCCcc
Confidence 9988666665533 344899999999999999999999998 99999999999999999999999999987643321
Q ss_pred CCccccceecccccCCCccchhhhccC-CCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCCC
Q 005227 532 EGIVPAHVSTVVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 610 (707)
Q Consensus 532 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 610 (707)
.......++..|+|||++.+. .++.++||||||+++|||++|+.||........ ...... . .
T Consensus 156 ------~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~-~~~~~~------~----~ 218 (288)
T cd07833 156 ------SPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQ-LYLIQK------C----L 218 (288)
T ss_pred ------ccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHH------H----h
Confidence 122334578899999999887 889999999999999999999999865433211 111000 0 0
Q ss_pred CCCChHHHHHHHHHHHHhcccCCC----CCCCHHHHHHHHHHhhhcCCC-CCCCCCccccCCCCCCCCCCCCCCcCCCCC
Q 005227 611 GSYPSECVEKFIKLALKCCQDETD----ARPSMSEVMRELESIWNMMPE-SDTKTPEFINSEHTSKEETPPSSSSMLKHP 685 (707)
Q Consensus 611 ~~~~~~~~~~l~~l~~~c~~~~p~----~RPt~~~v~~~L~~~~~~~~~-~~~~~~dll~~~L~~dP~~R~sa~e~L~Hp 685 (707)
...+...... +..++. +.+...+. ..+....+. ......+|+.+||..+|++|||++++++||
T Consensus 219 ~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~ 286 (288)
T cd07833 219 GPLPPSHQEL--------FSSNPRFAGVAFPEPSQP----ESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQHP 286 (288)
T ss_pred CCCCHHHhhh--------cccCccccccccCCCCCc----HHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcCC
Confidence 0000000000 000000 00111000 011112222 255677899999999999999999999999
Q ss_pred CC
Q 005227 686 YV 687 (707)
Q Consensus 686 ~f 687 (707)
||
T Consensus 287 ~f 288 (288)
T cd07833 287 YF 288 (288)
T ss_pred CC
Confidence 98
No 264
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=6.8e-37 Score=314.49 Aligned_cols=252 Identities=25% Similarity=0.339 Sum_probs=203.2
Q ss_pred CCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCCh---hhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEe
Q 005227 376 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 451 (707)
Q Consensus 376 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E 451 (707)
+|++.+.||.|+||.||+|... +++.||+|.+..... ...+.+.+|++++++++||||+++++++......++|+|
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD 80 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence 5788999999999999999975 689999999875332 335688999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCC
Q 005227 452 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 531 (707)
Q Consensus 452 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 531 (707)
|+++++|.+++... .++++..+..++.|+++||.|||+.+ ++|+||+|+||++++++.++|+|||++.......
T Consensus 81 ~~~~~~L~~~l~~~--~~l~~~~~~~~~~~i~~~l~~lh~~~---i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~- 154 (258)
T cd05578 81 LLLGGDLRYHLSQK--VKFSEEQVKFWICEIVLALEYLHSKG---IIHRDIKPDNILLDEQGHVHITDFNIATKVTPDT- 154 (258)
T ss_pred CCCCCCHHHHHHhc--CCcCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeEEcCCCCEEEeecccccccCCCc-
Confidence 99999999999664 46899999999999999999999998 9999999999999999999999999987654321
Q ss_pred CCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCCCC
Q 005227 532 EGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 611 (707)
Q Consensus 532 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 611 (707)
......|+..|+|||.+.+..++.++|+||||+++|+|++|+.||.......
T Consensus 155 -------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~--------------------- 206 (258)
T cd05578 155 -------LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTI--------------------- 206 (258)
T ss_pred -------cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccH---------------------
Confidence 1233457889999999999889999999999999999999999997543210
Q ss_pred CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCC--CcCCCCCCC
Q 005227 612 SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSS--SSMLKHPYV 687 (707)
Q Consensus 612 ~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa--~e~L~Hp~f 687 (707)
...+.+.........|. .......++|.+|+..||.+|+++ +|+++||||
T Consensus 207 ------~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~~~~~~ 258 (258)
T cd05578 207 ------RDQIRAKQETADVLYPA--------------------TWSTEAIDAINKLLERDPQKRLGDNLKDLKNHPYF 258 (258)
T ss_pred ------HHHHHHHhccccccCcc--------------------cCcHHHHHHHHHHccCChhHcCCccHHHHhcCCCC
Confidence 00111111100001111 111334468888999999999999 999999998
No 265
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=8.4e-36 Score=308.52 Aligned_cols=253 Identities=27% Similarity=0.347 Sum_probs=192.6
Q ss_pred ceEeeeCceEEEEEEeCC---CcEEEEEEeccCCh-hhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEecCCCC
Q 005227 381 TQIGQGGYGKVYKGILPD---GTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNG 456 (707)
Q Consensus 381 ~~lG~G~fg~Vy~~~~~~---~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~g 456 (707)
+.||+|+||.||+|.+.+ +..+|+|.+..... .....+.+|+.++++++||||+++++++.+....++||||+++|
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g 80 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLG 80 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCC
Confidence 358999999999998643 46799998875432 33457889999999999999999999999989999999999999
Q ss_pred CHHHHHhhcC---CCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCCC
Q 005227 457 TLRDQLSAKS---KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEG 533 (707)
Q Consensus 457 sL~~~l~~~~---~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 533 (707)
+|.+++.... ....++..+..++.|++.||+|||+.+ ++||||||+||+++.++.+||+|||+++.....+.
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~-- 155 (269)
T cd05087 81 DLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNN---FIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDY-- 155 (269)
T ss_pred cHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCC---EeccccCcceEEEcCCCcEEECCccccccccCcce--
Confidence 9999997532 224677888899999999999999998 99999999999999999999999999875432211
Q ss_pred ccccceecccccCCCccchhhhccC-------CCCCchhhHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHhhcccchhh
Q 005227 534 IVPAHVSTVVKGTPGYLDPEYFLTH-------KLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSV 605 (707)
Q Consensus 534 ~~~~~~~~~~~gt~~y~aPE~~~~~-------~~s~~sDVwSlGvll~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~ 605 (707)
........++..|+|||++.+. .++.++|||||||++|||++ |+.||......... ...... .....
T Consensus 156 ---~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~-~~~~~~-~~~~~ 230 (269)
T cd05087 156 ---YVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVL-TYTVRE-QQLKL 230 (269)
T ss_pred ---eecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHH-HHHhhc-ccCCC
Confidence 0112234567889999998642 35789999999999999996 99999654432211 111111 00111
Q ss_pred ccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 005227 606 IDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELE 647 (707)
Q Consensus 606 ~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~ 647 (707)
.. +.........+.+++..|| .+|++||++.++++.|+
T Consensus 231 ~~---~~~~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 231 PK---PRLKLPLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred CC---CccCCCCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 11 1112234556788999999 57999999999998763
No 266
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=7.1e-36 Score=313.83 Aligned_cols=199 Identities=26% Similarity=0.426 Sum_probs=176.1
Q ss_pred cCCCccceEeeeCceEEEEEEe-CCCcEEEEEEeccCChhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEecC
Q 005227 375 NNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 453 (707)
Q Consensus 375 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~ 453 (707)
.+|+..+.||+|+||.||+|.. .+++.||+|.+........+.+.+|+.+++.++|+||+++++++...+..++||||+
T Consensus 19 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 98 (297)
T cd06656 19 KKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL 98 (297)
T ss_pred hhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeeccc
Confidence 6788999999999999999996 479999999997655555667889999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCCC
Q 005227 454 SNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEG 533 (707)
Q Consensus 454 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 533 (707)
++++|.+++.+. .+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++.......
T Consensus 99 ~~~~L~~~~~~~---~~~~~~~~~~~~~l~~~L~~LH~~~---i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~--- 169 (297)
T cd06656 99 AGGSLTDVVTET---CMDEGQIAAVCRECLQALDFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ--- 169 (297)
T ss_pred CCCCHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEECcCccceEccCCc---
Confidence 999999998543 4788999999999999999999998 9999999999999999999999999987653321
Q ss_pred ccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCC
Q 005227 534 IVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 586 (707)
Q Consensus 534 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~ 586 (707)
.......+++.|+|||.+.+..++.++|||||||++|++++|+.||...
T Consensus 170 ----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~ 218 (297)
T cd06656 170 ----SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNE 218 (297)
T ss_pred ----cCcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 1122345788999999999999999999999999999999999999643
No 267
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=1.3e-36 Score=315.99 Aligned_cols=253 Identities=23% Similarity=0.339 Sum_probs=198.1
Q ss_pred EeeeCceEEEEEEeC-CCcEEEEEEeccCCh---hhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEecCCCCCH
Q 005227 383 IGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTL 458 (707)
Q Consensus 383 lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL 458 (707)
||+|+||+||+|... +|+.||+|.+..... .....+.+|+++++.++||||+++++++...+..++||||+++++|
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence 689999999999864 789999999865322 2244667899999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCCCccccc
Q 005227 459 RDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAH 538 (707)
Q Consensus 459 ~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~ 538 (707)
.+++.......+++..++.++.|++.||.|||+.+ ++|+||+|+||++++++.+||+|||.+...... .
T Consensus 81 ~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~---i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~--------~ 149 (277)
T cd05577 81 KYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRR---IVYRDLKPENVLLDDHGNVRISDLGLAVELKGG--------K 149 (277)
T ss_pred HHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCCCCEEEccCcchhhhccC--------C
Confidence 99998766567999999999999999999999998 999999999999999999999999998765321 1
Q ss_pred eecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCCCCCCChHHH
Q 005227 539 VSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECV 618 (707)
Q Consensus 539 ~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 618 (707)
......++..|+|||++.+..++.++|||||||++|+|++|+.||.........
T Consensus 150 ~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~-------------------------- 203 (277)
T cd05577 150 KIKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEK-------------------------- 203 (277)
T ss_pred ccccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccH--------------------------
Confidence 112345778999999999888999999999999999999999999643221000
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCC-----CCCcCCCCCCCCCCCC
Q 005227 619 EKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPP-----SSSSMLKHPYVSSDVS 692 (707)
Q Consensus 619 ~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~-----sa~e~L~Hp~f~~~~~ 692 (707)
..+. ..... .+.. ..+..++...++|.+||+.||++|+ ++.++++||||..-.+
T Consensus 204 ~~~~---~~~~~-~~~~----------------~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~h~~~~~~~~ 262 (277)
T cd05577 204 EELK---RRTLE-MAVE----------------YPDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVREHPLFKDLNW 262 (277)
T ss_pred HHHH---hcccc-cccc----------------CCccCCHHHHHHHHHHccCChhHccCCCcccHHHHHhChhhhcCCh
Confidence 0000 00000 0000 0011233445788888888899999 6777999999976554
No 268
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=1.1e-35 Score=309.28 Aligned_cols=257 Identities=27% Similarity=0.454 Sum_probs=207.1
Q ss_pred cCCCccceEeeeCceEEEEEEeC-CCc----EEEEEEeccCCh-hhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEE
Q 005227 375 NNFNSSTQIGQGGYGKVYKGILP-DGT----VVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 448 (707)
Q Consensus 375 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~----~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~l 448 (707)
.+|+..+.||+|+||+||+|.++ +|+ .||+|.+..... .....+.+|+.++++++|+||+++++++.. ...++
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~ 85 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQL 85 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceEE
Confidence 56788899999999999999964 333 689998876543 334678899999999999999999999987 78899
Q ss_pred EEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCC
Q 005227 449 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 528 (707)
Q Consensus 449 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~ 528 (707)
||||+++|+|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+||++++++.+||+|||+++....
T Consensus 86 v~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~~---i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~ 161 (279)
T cd05057 86 ITQLMPLGCLLDYVRNHK-DNIGSQYLLNWCVQIAKGMSYLEEKR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLDV 161 (279)
T ss_pred EEecCCCCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhCC---EEecccCcceEEEcCCCeEEECCCcccccccC
Confidence 999999999999997643 34899999999999999999999988 99999999999999999999999999987643
Q ss_pred CCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHhhcccchhhcc
Q 005227 529 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVID 607 (707)
Q Consensus 529 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 607 (707)
... ........++..|+|||.+....++.++|||||||++||+++ |+.||..... .+. .... ..
T Consensus 162 ~~~-----~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~-~~~-~~~~--------~~ 226 (279)
T cd05057 162 DEK-----EYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPA-VEI-PDLL--------EK 226 (279)
T ss_pred ccc-----ceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCH-HHH-HHHH--------hC
Confidence 211 011112224568999999988899999999999999999999 9999865432 111 1111 11
Q ss_pred CCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 005227 608 GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 651 (707)
Q Consensus 608 ~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~ 651 (707)
+.....+..+...+.+++.+||..+|..||++.++++.++++.+
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~ 270 (279)
T cd05057 227 GERLPQPPICTIDVYMVLVKCWMIDAESRPTFKELINEFSKMAR 270 (279)
T ss_pred CCCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 22223344456778999999999999999999999999998765
No 269
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=2.6e-36 Score=318.73 Aligned_cols=286 Identities=23% Similarity=0.331 Sum_probs=201.8
Q ss_pred hcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCCh--hhHHHHHHHHHHHHccCCCcceeEEEEEEeCC------
Q 005227 374 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG------ 444 (707)
Q Consensus 374 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~------ 444 (707)
-++|+..+.||+|+||.||+|... +++.||||.+..... .....+.+|++++++++||||+++++++....
T Consensus 11 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 90 (310)
T cd07865 11 VSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRY 90 (310)
T ss_pred hhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCC
Confidence 357899999999999999999965 789999998864322 22345678999999999999999999986554
Q ss_pred --eEEEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecc
Q 005227 445 --EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGL 522 (707)
Q Consensus 445 --~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGl 522 (707)
..++||||+. ++|.+++.... ..+++..++.++.|++.||+|||+.+ ++|+||||+||+++.++.+||+|||+
T Consensus 91 ~~~~~lv~e~~~-~~l~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~ 165 (310)
T cd07865 91 KGSFYLVFEFCE-HDLAGLLSNKN-VKFTLSEIKKVMKMLLNGLYYIHRNK---ILHRDMKAANILITKDGILKLADFGL 165 (310)
T ss_pred CceEEEEEcCCC-cCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEECCCCcEEECcCCC
Confidence 4599999996 58888886543 35899999999999999999999998 99999999999999999999999999
Q ss_pred cccCCCCCCCCccccceecccccCCCccchhhhccC-CCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhccc
Q 005227 523 SRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSM 601 (707)
Q Consensus 523 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~ 601 (707)
+.......... ........++..|+|||.+.+. .++.++||||||+++|||++|+.||...... .......
T Consensus 166 ~~~~~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~-~~~~~~~---- 237 (310)
T cd07865 166 ARAFSLSKNSK---PNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQ-HQLTLIS---- 237 (310)
T ss_pred cccccCCcccC---CCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHH----
Confidence 98664322111 1112234578899999998764 4788999999999999999999998654332 1111100
Q ss_pred chhhccCCCCCCChHHHHHHHHHHHHhccc--CCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCC
Q 005227 602 MFSVIDGNMGSYPSECVEKFIKLALKCCQD--ETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSS 679 (707)
Q Consensus 602 ~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~--~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~ 679 (707)
.+ .+..+.+.......+ .++.. .|.. ....+...+. ....+....++|.+||..||++|||++
T Consensus 238 --~~----~~~~~~~~~~~~~~~--~~~~~~~~~~~--~~~~~~~~l~-----~~~~~~~~~dli~~~l~~~P~~R~t~~ 302 (310)
T cd07865 238 --QL----CGSITPEVWPGVDKL--ELFKKMELPQG--QKRKVKERLK-----PYVKDPHALDLIDKLLVLDPAKRIDAD 302 (310)
T ss_pred --HH----hCCCChhhcccccch--hhhhhccCCCc--cchhhHHhcc-----cccCCHHHHHHHHHHhcCChhhccCHH
Confidence 00 001111100000000 00000 0100 0000001110 011234456899999999999999999
Q ss_pred cCCCCCCC
Q 005227 680 SMLKHPYV 687 (707)
Q Consensus 680 e~L~Hp~f 687 (707)
|+|+||||
T Consensus 303 e~l~h~~f 310 (310)
T cd07865 303 TALNHDFF 310 (310)
T ss_pred HHhcCCCC
Confidence 99999998
No 270
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=4.9e-36 Score=312.59 Aligned_cols=280 Identities=24% Similarity=0.395 Sum_probs=207.3
Q ss_pred CCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCChh-hHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEecC
Q 005227 376 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ-GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 453 (707)
Q Consensus 376 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~-~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~ 453 (707)
+|+..+.||.|++|.||+|+.. +|+.||||.+...... ..+.+.+|++++++++|+||+++++++...+..++||||+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYM 80 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecC
Confidence 5788999999999999999975 6899999998764332 3456788999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhcC-CCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCC
Q 005227 454 SNGTLRDQLSAKS-KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 532 (707)
Q Consensus 454 ~~gsL~~~l~~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 532 (707)
++ +|.+++.... ...+++..+..++.|++.||+|||+.+ ++||||||+||++++++.++++|||++.......
T Consensus 81 ~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~-- 154 (284)
T cd07836 81 DK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENR---VLHRDLKPQNLLINKRGELKLADFGLARAFGIPV-- 154 (284)
T ss_pred Cc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEECCCCcEEEeecchhhhhcCCc--
Confidence 74 8988886543 346899999999999999999999998 9999999999999999999999999997543211
Q ss_pred CccccceecccccCCCccchhhhcc-CCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCCCC
Q 005227 533 GIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 611 (707)
Q Consensus 533 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 611 (707)
.......++..|++||++.+ ..++.++|||||||++|||++|+.||...... +........ ..
T Consensus 155 -----~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~-~~~~~~~~~----------~~ 218 (284)
T cd07836 155 -----NTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNE-DQLLKIFRI----------MG 218 (284)
T ss_pred -----cccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcH-HHHHHHHHH----------hC
Confidence 11223456889999999876 45788999999999999999999999754332 111111100 00
Q ss_pred CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCCCCCCC
Q 005227 612 SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYV 687 (707)
Q Consensus 612 ~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f 687 (707)
.........+... ...-...|. ...... ....+..+....+++.+|++.||++|++++|+++||||
T Consensus 219 ~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~-------~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~f 284 (284)
T cd07836 219 TPTESTWPGISQL-PEYKPTFPR--YPPQDL-------QQLFPHADPLGIDLLHRLLQLNPELRISAHDALQHPWF 284 (284)
T ss_pred CCChhhHHHHhcC-chhcccccC--CChHHH-------HHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence 0011111111100 000011111 111111 11123345667789999999999999999999999998
No 271
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.5e-38 Score=329.84 Aligned_cols=259 Identities=24% Similarity=0.406 Sum_probs=208.5
Q ss_pred cCCCccceEeeeCceEEEEEEeCC-CcEEEEEEeccCChhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEecC
Q 005227 375 NNFNSSTQIGQGGYGKVYKGILPD-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 453 (707)
Q Consensus 375 ~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~ 453 (707)
+.|.++..||.|+||.||+|+.++ +-..|.|++...+.+..++|.-|+++|...+||+||++++.|..++.+|+..|||
T Consensus 32 d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC 111 (1187)
T KOG0579|consen 32 DHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFC 111 (1187)
T ss_pred HHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeec
Confidence 345667789999999999999764 4556778887777777789999999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCCC
Q 005227 454 SNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEG 533 (707)
Q Consensus 454 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 533 (707)
.||-.+.++-.-+ ..+.+.++.-+++|++.||.|||++. |||||||+.|||++-+|.++++|||.+.....
T Consensus 112 ~GGAVDaimlEL~-r~LtE~QIqvvc~q~ldALn~LHs~~---iIHRDLKAGNiL~TldGdirLADFGVSAKn~~----- 182 (1187)
T KOG0579|consen 112 GGGAVDAIMLELG-RVLTEDQIQVVCYQVLDALNWLHSQN---IIHRDLKAGNILLTLDGDIRLADFGVSAKNKS----- 182 (1187)
T ss_pred CCchHhHHHHHhc-cccchHHHHHHHHHHHHHHHHHhhcc---hhhhhccccceEEEecCcEeeecccccccchh-----
Confidence 9999988876643 46999999999999999999999998 99999999999999999999999999854321
Q ss_pred ccccceecccccCCCccchhhhcc-----CCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccC
Q 005227 534 IVPAHVSTVVKGTPGYLDPEYFLT-----HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDG 608 (707)
Q Consensus 534 ~~~~~~~~~~~gt~~y~aPE~~~~-----~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 608 (707)
.........||+.|||||+.+. .+|++++||||||++|.||..+.+|...-...
T Consensus 183 --t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpM------------------- 241 (1187)
T KOG0579|consen 183 --TRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPM------------------- 241 (1187)
T ss_pred --HHhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchH-------------------
Confidence 1233456789999999999864 68999999999999999999998886532211
Q ss_pred CCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCCCCCCCC
Q 005227 609 NMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVS 688 (707)
Q Consensus 609 ~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f~ 688 (707)
.-+.+++ ..+| ||.. ....++..+.|||.+||..||+.||++.++|+||||.
T Consensus 242 ----------RVllKia----KSeP---PTLl-----------qPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~Hpfv~ 293 (1187)
T KOG0579|consen 242 ----------RVLLKIA----KSEP---PTLL-----------QPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKHPFVQ 293 (1187)
T ss_pred ----------HHHHHHh----hcCC---Cccc-----------CcchhhhHHHHHHHHHHhcCCccCCCHHHHhhCcccc
Confidence 1111111 1222 2221 1123344566888899999999999999999999998
Q ss_pred CCC
Q 005227 689 SDV 691 (707)
Q Consensus 689 ~~~ 691 (707)
+-.
T Consensus 294 ~~~ 296 (1187)
T KOG0579|consen 294 NAP 296 (1187)
T ss_pred cCC
Confidence 543
No 272
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=2.3e-36 Score=323.27 Aligned_cols=289 Identities=24% Similarity=0.372 Sum_probs=208.5
Q ss_pred hcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCC-hhhHHHHHHHHHHHHccCCCcceeEEEEEEeC-----CeE
Q 005227 374 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE-----GEQ 446 (707)
Q Consensus 374 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~-----~~~ 446 (707)
.++|++.+.||+|+||.||+|... +|+.||||.+.... ......+.+|+.++++++|+||+++++++... ...
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 83 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDV 83 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceE
Confidence 468999999999999999999964 78999999986422 22345688899999999999999999987544 357
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccC
Q 005227 447 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 526 (707)
Q Consensus 447 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~ 526 (707)
++|+||++ ++|.+++.. ..+++..++.++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++..
T Consensus 84 ~lv~e~~~-~~l~~~~~~---~~l~~~~~~~i~~ql~~aL~~LH~~~---ivH~dlkp~Nill~~~~~~kl~dfg~~~~~ 156 (336)
T cd07849 84 YIVQELME-TDLYKLIKT---QHLSNDHIQYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTNCDLKICDFGLARIA 156 (336)
T ss_pred EEEehhcc-cCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHEEECCCCCEEECcccceeec
Confidence 99999996 588888743 35899999999999999999999998 999999999999999999999999999765
Q ss_pred CCCCCCCccccceecccccCCCccchhhhcc-CCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhh
Q 005227 527 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSV 605 (707)
Q Consensus 527 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~ 605 (707)
...... ........|+..|+|||++.+ ..++.++|||||||++|||++|+.||........ .... ...
T Consensus 157 ~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~-~~~~------~~~ 225 (336)
T cd07849 157 DPEHDH----TGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQ-LNLI------LGV 225 (336)
T ss_pred cccccc----cCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHH------HHH
Confidence 432111 111223467899999998765 5689999999999999999999999965432211 1110 000
Q ss_pred ccCCCCCCChHHHHHHHHHH-HHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCCCC
Q 005227 606 IDGNMGSYPSECVEKFIKLA-LKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKH 684 (707)
Q Consensus 606 ~~~~~~~~~~~~~~~l~~l~-~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~H 684 (707)
+...+.+....+.... ...+...+.. +... .....+..+....+|+.+||..||++|||++|+++|
T Consensus 226 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--------~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~h 292 (336)
T cd07849 226 ----LGTPSQEDLNCIISLRARNYIKSLPFK-PKVP--------WNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAH 292 (336)
T ss_pred ----cCCCCHHHHHHhhchhhhhHHhhcCcC-Cccc--------HHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 1111111111111111 1111111111 1110 001123345667799999999999999999999999
Q ss_pred CCCCCCCCC
Q 005227 685 PYVSSDVSG 693 (707)
Q Consensus 685 p~f~~~~~~ 693 (707)
|||..-...
T Consensus 293 p~~~~~~~~ 301 (336)
T cd07849 293 PYLEQYHDP 301 (336)
T ss_pred ccccccCCC
Confidence 999866554
No 273
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=1.9e-36 Score=315.51 Aligned_cols=259 Identities=25% Similarity=0.404 Sum_probs=196.7
Q ss_pred cCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCCh-hhHHHHHHHHHH-HHccCCCcceeEEEEEEeCCeEEEEEe
Q 005227 375 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL-QGEKEFLTEIQF-LSRLHHRNLVSLVGYCDEEGEQMLVYE 451 (707)
Q Consensus 375 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~~E~~~-l~~l~h~nIv~l~~~~~~~~~~~lV~E 451 (707)
++|++.+.||+|+||.||+|... +|+.||+|++..... ....++..|+.. ++..+|+||+++++++..++..++|||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e 80 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICME 80 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhh
Confidence 46888999999999999999975 799999999875432 234556667665 666789999999999999999999999
Q ss_pred cCCCCCHHHHHhhc--CCCCcCHHHHHHHHHHHHHHHHHHHhC-CCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCC
Q 005227 452 FMSNGTLRDQLSAK--SKEPLGFAMRLSIALGSSRGILYLHTE-ADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 528 (707)
Q Consensus 452 ~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~-~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~ 528 (707)
|++ |+|.+++... ....+++..++.++.|++.||+|||++ + ++||||||+||++++++.+||+|||++.....
T Consensus 81 ~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~---i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~ 156 (283)
T cd06617 81 VMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLS---VIHRDVKPSNVLINRNGQVKLCDFGISGYLVD 156 (283)
T ss_pred hhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCC---eecCCCCHHHEEECCCCCEEEeeccccccccc
Confidence 996 6898888652 234689999999999999999999986 6 99999999999999999999999999876532
Q ss_pred CCCCCccccceecccccCCCccchhhhcc----CCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchh
Q 005227 529 PDIEGIVPAHVSTVVKGTPGYLDPEYFLT----HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFS 604 (707)
Q Consensus 529 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~ 604 (707)
. .......|+..|+|||.+.+ ..++.++|||||||++|||++|+.||.......+.....
T Consensus 157 ~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~-------- 220 (283)
T cd06617 157 S--------VAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQV-------- 220 (283)
T ss_pred c--------cccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHHHH--------
Confidence 1 11223457889999999865 456889999999999999999999996432211111100
Q ss_pred hccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCCCC
Q 005227 605 VIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKH 684 (707)
Q Consensus 605 ~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~H 684 (707)
........+ .. .....+.+|+.+||..+|++||+++++++|
T Consensus 221 -~~~~~~~~~-------------------~~-------------------~~~~~l~~li~~~l~~~p~~Rp~~~~il~~ 261 (283)
T cd06617 221 -VEEPSPQLP-------------------AE-------------------KFSPEFQDFVNKCLKKNYKERPNYPELLQH 261 (283)
T ss_pred -HhcCCCCCC-------------------cc-------------------ccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000000000 00 011223467788888889999999999999
Q ss_pred CCCCCCCC
Q 005227 685 PYVSSDVS 692 (707)
Q Consensus 685 p~f~~~~~ 692 (707)
|||.....
T Consensus 262 ~~~~~~~~ 269 (283)
T cd06617 262 PFFELHLS 269 (283)
T ss_pred chhhhccc
Confidence 99987654
No 274
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=2.6e-36 Score=316.58 Aligned_cols=284 Identities=22% Similarity=0.328 Sum_probs=206.1
Q ss_pred cCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCCh--hhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEe
Q 005227 375 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 451 (707)
Q Consensus 375 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E 451 (707)
++|+..+.||+|++|+||+|... +++.||+|.+..... ...+.+.+|++++++++|+||+++++++......++|||
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 81 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFE 81 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEe
Confidence 47889999999999999999975 789999998865332 223578899999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcC-CCcEEEeeecccccCCCCC
Q 005227 452 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDH-KFTAKVADFGLSRLAPVPD 530 (707)
Q Consensus 452 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~-~~~~kl~DFGla~~~~~~~ 530 (707)
|++ ++|.+++.......+++..++.++.||+.||+|||+.+ ++|+||+|+||+++. ++.+||+|||++.......
T Consensus 82 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~---i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~ 157 (294)
T PLN00009 82 YLD-LDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHR---VLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPV 157 (294)
T ss_pred ccc-ccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCcceEEEECCCCEEEEcccccccccCCCc
Confidence 995 58888886655555788899999999999999999998 999999999999985 5679999999997543211
Q ss_pred CCCccccceecccccCCCccchhhhcc-CCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCC
Q 005227 531 IEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGN 609 (707)
Q Consensus 531 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 609 (707)
.......++..|+|||++.+ ..++.++|||||||++|+|+||+.||......... ..... ....
T Consensus 158 -------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~-~~~~~------~~~~- 222 (294)
T PLN00009 158 -------RTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDEL-FKIFR------ILGT- 222 (294)
T ss_pred -------cccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHH-HHHHH------HhCC-
Confidence 11123456889999999876 45789999999999999999999999754432111 11000 0000
Q ss_pred CCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCCCCCCCCC
Q 005227 610 MGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSS 689 (707)
Q Consensus 610 ~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f~~ 689 (707)
...........+-.. ....|..++. ......+..+..+.+|+.+||+.+|++||+++++++||||..
T Consensus 223 ---~~~~~~~~~~~~~~~-~~~~~~~~~~---------~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~~~~~~ 289 (294)
T PLN00009 223 ---PNEETWPGVTSLPDY-KSAFPKWPPK---------DLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEHEYFKD 289 (294)
T ss_pred ---CChhhccccccchhh-hhhcccCCCC---------CHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcCchHhH
Confidence 000000000000000 0000111110 001112444556678999999999999999999999999975
Q ss_pred C
Q 005227 690 D 690 (707)
Q Consensus 690 ~ 690 (707)
-
T Consensus 290 ~ 290 (294)
T PLN00009 290 L 290 (294)
T ss_pred H
Confidence 3
No 275
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=1.5e-36 Score=313.57 Aligned_cols=260 Identities=24% Similarity=0.397 Sum_probs=201.1
Q ss_pred CCCccceEeeeCceEEEEEEe-CCCcEEEEEEeccCCh------hhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEE
Q 005227 376 NFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSL------QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 448 (707)
Q Consensus 376 ~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~------~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~l 448 (707)
+|+..+.||+|+||.||+|.. .+++.||+|.+..... ...+.+.+|++++++++|+||+++++++.+.+..++
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 80 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL 80 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence 478889999999999999995 5789999998864321 124678899999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCC-cEEEeeecccccCC
Q 005227 449 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKF-TAKVADFGLSRLAP 527 (707)
Q Consensus 449 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~-~~kl~DFGla~~~~ 527 (707)
||||+++++|.+++.+. .++++..++.++.|++.||+|||+.+ ++|+||||+||+++.++ .+||+|||.+....
T Consensus 81 v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~ql~~al~~LH~~~---i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~ 155 (268)
T cd06630 81 FVEWMAGGSVSHLLSKY--GAFKEAVIINYTEQLLRGLSYLHENQ---IIHRDVKGANLLIDSTGQRLRIADFGAAARLA 155 (268)
T ss_pred EEeccCCCcHHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEEcccccccccc
Confidence 99999999999999754 35889999999999999999999998 99999999999998776 59999999997664
Q ss_pred CCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhcc
Q 005227 528 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVID 607 (707)
Q Consensus 528 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 607 (707)
...... ........|+..|+|||.+.+..++.++||||+||++|||++|..||........ .
T Consensus 156 ~~~~~~---~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~-~-------------- 217 (268)
T cd06630 156 AKGTGA---GEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNH-L-------------- 217 (268)
T ss_pred cccccC---CccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcch-H--------------
Confidence 321110 1112234578999999999988999999999999999999999999853221000 0
Q ss_pred CCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCCCCCCC
Q 005227 608 GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYV 687 (707)
Q Consensus 608 ~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f 687 (707)
..+.+.. .... .+... ...+....+++.+|++.+|++||++.|+++||||
T Consensus 218 -----------~~~~~~~---~~~~---~~~~~-------------~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~~~~~ 267 (268)
T cd06630 218 -----------ALIFKIA---SATT---APSIP-------------EHLSPGLRDVTLRCLELQPEDRPPSRELLKHPVF 267 (268)
T ss_pred -----------HHHHHHh---ccCC---CCCCc-------------hhhCHHHHHHHHHHcCCCcccCcCHHHHhcCccc
Confidence 0000000 0000 01000 0112233468888999999999999999999998
Q ss_pred C
Q 005227 688 S 688 (707)
Q Consensus 688 ~ 688 (707)
.
T Consensus 268 ~ 268 (268)
T cd06630 268 R 268 (268)
T ss_pred C
Confidence 4
No 276
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=1.1e-35 Score=304.18 Aligned_cols=248 Identities=30% Similarity=0.485 Sum_probs=201.6
Q ss_pred ceEeeeCceEEEEEEeCCCcEEEEEEeccCChh-hHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEecCCCCCHH
Q 005227 381 TQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQ-GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLR 459 (707)
Q Consensus 381 ~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~-~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~ 459 (707)
++||+|+||.||+|...+++.||+|.+...... ..+.+.+|++++++++|+||+++++++......++||||+++++|.
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~ 80 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLL 80 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHH
Confidence 468999999999999877999999988765443 4567899999999999999999999999999999999999999999
Q ss_pred HHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCCCccccce
Q 005227 460 DQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHV 539 (707)
Q Consensus 460 ~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~ 539 (707)
+++.... ..+++..+..++.+++.||+|||+.+ ++||||||+||+++.++.+||+|||+++....... ...
T Consensus 81 ~~l~~~~-~~~~~~~~~~~~~~~~~~l~~lH~~~---i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~-----~~~ 151 (251)
T cd05041 81 TFLRKKK-NRLTVKKLLQMSLDAAAGMEYLESKN---CIHRDLAARNCLVGENNVLKISDFGMSREEEGGIY-----TVS 151 (251)
T ss_pred HHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCC---EehhhcCcceEEEcCCCcEEEeeccccccccCCcc-----eec
Confidence 9996643 35889999999999999999999998 99999999999999999999999999976432110 001
Q ss_pred ecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHhhcccchhhccCCCCCCChHHH
Q 005227 540 STVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECV 618 (707)
Q Consensus 540 ~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 618 (707)
.....++..|+|||.+.+..++.++|||||||++|||++ |..||....... ..... . .......+...+
T Consensus 152 ~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~-~~~~~-~--------~~~~~~~~~~~~ 221 (251)
T cd05041 152 DGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQ-TRERI-E--------SGYRMPAPQLCP 221 (251)
T ss_pred cccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHH-HHHHH-h--------cCCCCCCCccCC
Confidence 111223567999999998899999999999999999999 888886543211 11110 0 111122455667
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 005227 619 EKFIKLALKCCQDETDARPSMSEVMRELE 647 (707)
Q Consensus 619 ~~l~~l~~~c~~~~p~~RPt~~~v~~~L~ 647 (707)
..+.+++.+|++.+|++||++.++++.|+
T Consensus 222 ~~~~~li~~~l~~~p~~Rp~~~ell~~l~ 250 (251)
T cd05041 222 EEIYRLMLQCWAYDPENRPSFSEIYNELQ 250 (251)
T ss_pred HHHHHHHHHHhccChhhCcCHHHHHHHhh
Confidence 78999999999999999999999998875
No 277
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=2.1e-35 Score=303.78 Aligned_cols=203 Identities=28% Similarity=0.419 Sum_probs=177.7
Q ss_pred hcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEec
Q 005227 374 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 452 (707)
Q Consensus 374 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~ 452 (707)
.++|+..+.||+|+||.||+|... +++.+|+|.+........+.+.+|++++++++||||+++++++...+..++||||
T Consensus 2 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~ 81 (262)
T cd06613 2 QEDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEY 81 (262)
T ss_pred ccceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeC
Confidence 357889999999999999999964 6789999998876555567899999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCC
Q 005227 453 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 532 (707)
Q Consensus 453 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 532 (707)
+++++|.+++... ...+++..+..++.|++.||+|||+.+ |+|+||||+||++++++.+||+|||.+.......
T Consensus 82 ~~~~~l~~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lh~~~---i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~-- 155 (262)
T cd06613 82 CGGGSLQDIYQVT-RGPLSELQIAYVCRETLKGLAYLHETG---KIHRDIKGANILLTEDGDVKLADFGVSAQLTATI-- 155 (262)
T ss_pred CCCCcHHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHHhCC---ceecCCChhhEEECCCCCEEECccccchhhhhhh--
Confidence 9999999998654 245899999999999999999999998 9999999999999999999999999987653211
Q ss_pred CccccceecccccCCCccchhhhccC---CCCCchhhHHHHHHHHHHHcCCCCCCCCc
Q 005227 533 GIVPAHVSTVVKGTPGYLDPEYFLTH---KLTDKSDVYSLGVVFLELLTGMQPISHGK 587 (707)
Q Consensus 533 ~~~~~~~~~~~~gt~~y~aPE~~~~~---~~s~~sDVwSlGvll~elltG~~pf~~~~ 587 (707)
.......++..|+|||.+.+. .++.++|||||||++|||++|+.||....
T Consensus 156 -----~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~ 208 (262)
T cd06613 156 -----AKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLH 208 (262)
T ss_pred -----hccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCC
Confidence 112234678899999999876 88999999999999999999999997544
No 278
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=7.4e-36 Score=309.73 Aligned_cols=199 Identities=31% Similarity=0.429 Sum_probs=175.2
Q ss_pred cCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCC-hhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEec
Q 005227 375 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 452 (707)
Q Consensus 375 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~ 452 (707)
++|+..+.||.|+||.||+|... +++.||+|.+.... ......+.+|+++++.++|+||+++++++.++...++|+||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEY 80 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEe
Confidence 46888899999999999999965 68999999987543 33346788999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCC
Q 005227 453 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 532 (707)
Q Consensus 453 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 532 (707)
+++++|.+++... .+++..++.++.|++.||.|||+.+ ++|+||+|+||++++++.++|+|||+++......
T Consensus 81 ~~~~~L~~~~~~~---~~~~~~~~~~~~ql~~~l~~lh~~~---i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~-- 152 (274)
T cd06609 81 CGGGSCLDLLKPG---KLDETYIAFILREVLLGLEYLHEEG---KIHRDIKAANILLSEEGDVKLADFGVSGQLTSTM-- 152 (274)
T ss_pred eCCCcHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCCCCEEEcccccceeecccc--
Confidence 9999999999654 6899999999999999999999998 9999999999999999999999999998764321
Q ss_pred CccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCC
Q 005227 533 GIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 586 (707)
Q Consensus 533 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~ 586 (707)
.......++..|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 153 -----~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~ 201 (274)
T cd06609 153 -----SKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDL 201 (274)
T ss_pred -----cccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccC
Confidence 1123345788999999999988999999999999999999999999643
No 279
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=5.8e-36 Score=306.92 Aligned_cols=246 Identities=30% Similarity=0.485 Sum_probs=201.6
Q ss_pred cCCCccceEeeeCceEEEEEEeCCCcEEEEEEeccCChhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEecCC
Q 005227 375 NNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMS 454 (707)
Q Consensus 375 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~ 454 (707)
++|++.+.||+|+||.||++.. +++.||+|...... ....+.+|+.++++++|+|++++++++... ..++||||++
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~e~~~ 81 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCDV--TAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVMELMS 81 (254)
T ss_pred HHceeeeeeccCCCCceEeccc-CCCceEEEeecCcc--hHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEEECCC
Confidence 4688899999999999999975 67889999986532 345788999999999999999999998654 5799999999
Q ss_pred CCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCCCc
Q 005227 455 NGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGI 534 (707)
Q Consensus 455 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 534 (707)
+++|.+++.......+++..++.++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||++......
T Consensus 82 ~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~----- 153 (254)
T cd05083 82 KGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKK---LVHRDLAARNILVSEDGVAKVSDFGLARVGSMG----- 153 (254)
T ss_pred CCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccccCcceEEEcCCCcEEECCCccceecccc-----
Confidence 999999998766667899999999999999999999988 999999999999999999999999998754221
Q ss_pred cccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHhhcccchhhccCCCCCC
Q 005227 535 VPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSY 613 (707)
Q Consensus 535 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 613 (707)
......+..|+|||.+.+..++.++|||||||++|||++ |+.||...... +.... .. .+.....
T Consensus 154 -----~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~-~~~~~-~~--------~~~~~~~ 218 (254)
T cd05083 154 -----VDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLK-EVKEC-VE--------KGYRMEP 218 (254)
T ss_pred -----CCCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHH-HHHHH-Hh--------CCCCCCC
Confidence 111233567999999998899999999999999999998 99998654321 11111 11 1111223
Q ss_pred ChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 005227 614 PSECVEKFIKLALKCCQDETDARPSMSEVMRELE 647 (707)
Q Consensus 614 ~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~ 647 (707)
+..++..+.+++.+||+.+|+.||++.+++..++
T Consensus 219 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 252 (254)
T cd05083 219 PEGCPADVYVLMTSCWETEPKKRPSFHKLREKLE 252 (254)
T ss_pred CCcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHc
Confidence 4456678899999999999999999999998875
No 280
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=9.5e-36 Score=310.95 Aligned_cols=256 Identities=21% Similarity=0.376 Sum_probs=203.2
Q ss_pred CCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEecCC
Q 005227 376 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMS 454 (707)
Q Consensus 376 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~ 454 (707)
.|...+.||+|++|.||+|... +++.|++|++........+.+.+|+.+++.++|+||+++++++...+..++|+||++
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~ 99 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLE 99 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccC
Confidence 3455689999999999999964 789999999876555556678999999999999999999999999999999999999
Q ss_pred CCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCCCc
Q 005227 455 NGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGI 534 (707)
Q Consensus 455 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 534 (707)
+++|.+++.. ..+++..+..++.|++.||+|||+.+ |+||||+|+||+++.++.++|+|||.+.......
T Consensus 100 ~~~L~~~~~~---~~~~~~~~~~~~~ql~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~---- 169 (285)
T cd06648 100 GGALTDIVTH---TRMNEEQIATVCLAVLKALSFLHAQG---VIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEV---- 169 (285)
T ss_pred CCCHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCChhhEEEcCCCcEEEcccccchhhccCC----
Confidence 9999999865 35899999999999999999999998 9999999999999999999999999886543211
Q ss_pred cccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCCCCCCC
Q 005227 535 VPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYP 614 (707)
Q Consensus 535 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 614 (707)
.......|+..|+|||.+.+..++.++|||||||++|||++|+.||...... ....
T Consensus 170 ---~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~-~~~~-------------------- 225 (285)
T cd06648 170 ---PRRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPL-QAMK-------------------- 225 (285)
T ss_pred ---cccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHH-HHHH--------------------
Confidence 1122345889999999999988999999999999999999999998643221 1100
Q ss_pred hHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCCCCCCCCCCC
Q 005227 615 SECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSSDV 691 (707)
Q Consensus 615 ~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f~~~~ 691 (707)
.+.... .|... ..........+|+++|++.+|++|||+.++++||||..-.
T Consensus 226 ---------~~~~~~------~~~~~-----------~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~ 276 (285)
T cd06648 226 ---------RIRDNL------PPKLK-----------NLHKVSPRLRSFLDRMLVRDPAQRATAAELLNHPFLAKAG 276 (285)
T ss_pred ---------HHHhcC------CCCCc-----------ccccCCHHHHHHHHHHcccChhhCcCHHHHccCcccccCC
Confidence 000000 00000 0011122345788889999999999999999999997643
No 281
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.1e-38 Score=302.10 Aligned_cols=291 Identities=22% Similarity=0.317 Sum_probs=211.9
Q ss_pred cCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccC--ChhhHHHHHHHHHHHHccCCCcceeEEEEEEe--------C
Q 005227 375 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEG--SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE--------E 443 (707)
Q Consensus 375 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~--------~ 443 (707)
..|....+||+|.||.||+|+.+ +|+.||+|+.--. .........+|+++|..++|+|++.+++.|.. .
T Consensus 17 ~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r 96 (376)
T KOG0669|consen 17 SKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDR 96 (376)
T ss_pred hHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCccccc
Confidence 34566788999999999999965 6788998865321 11223567899999999999999999988733 2
Q ss_pred CeEEEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeeccc
Q 005227 444 GEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLS 523 (707)
Q Consensus 444 ~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla 523 (707)
...++||++|+. +|.-+|... ...++..++.+++.++..||.|+|... |+|||+|+.|||++.++.+||+|||++
T Consensus 97 ~t~ylVf~~ceh-DLaGlLsn~-~vr~sls~Ikk~Mk~Lm~GL~~iHr~k---ilHRDmKaaNvLIt~dgilklADFGla 171 (376)
T KOG0669|consen 97 ATFYLVFDFCEH-DLAGLLSNR-KVRFSLSEIKKVMKGLMNGLYYIHRNK---ILHRDMKAANVLITKDGILKLADFGLA 171 (376)
T ss_pred ceeeeeHHHhhh-hHHHHhcCc-cccccHHHHHHHHHHHHHHHHHHHHhh---HHhhcccHhhEEEcCCceEEeeccccc
Confidence 358999999976 888888543 346899999999999999999999998 999999999999999999999999999
Q ss_pred ccCCCCCCCCccccceecccccCCCccchhhhcc-CCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccc
Q 005227 524 RLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMM 602 (707)
Q Consensus 524 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~ 602 (707)
+.+...+... ....+..+.|..|++||.+.+ ..|+.+.|||+-||+|.||+||.+-+....+ .+++..+
T Consensus 172 r~fs~~~n~~---kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnte-qqql~~I------ 241 (376)
T KOG0669|consen 172 RAFSTSKNVV---KPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTE-QQQLHLI------ 241 (376)
T ss_pred cceecccccC---CCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChH-HHHHHHH------
Confidence 8775544221 223455667999999999987 6799999999999999999999666654333 2222211
Q ss_pred hhhccCCCCCCChHHHH-----HHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCC
Q 005227 603 FSVIDGNMGSYPSECVE-----KFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPS 677 (707)
Q Consensus 603 ~~~~~~~~~~~~~~~~~-----~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~s 677 (707)
....+....+.+. .+++-+ ...|--.-+.+. ++...+.+ ..++.+.|++.+||.+||.+|+.
T Consensus 242 ----s~LcGs~tkevWP~~d~lpL~~si----e~ePl~~~~~rk----v~n~~kp~-~kd~~a~dLle~ll~~DP~kR~~ 308 (376)
T KOG0669|consen 242 ----SQLCGSITKEVWPNVDNLPLYQSI----ELEPLPKGQKRK----VKNRLKPY-VKDDEALDLLEKLLKLDPTKRID 308 (376)
T ss_pred ----HHHhccCCcccCCCcccchHHHhc----cCCCCCcchhhh----hhhhcccc-cCChhHHHHHHHHhccCcccCcc
Confidence 1111111111111 111111 111111112222 22222222 23667889999999999999999
Q ss_pred CCcCCCCCCCCCCCCC
Q 005227 678 SSSMLKHPYVSSDVSG 693 (707)
Q Consensus 678 a~e~L~Hp~f~~~~~~ 693 (707)
|+++|+|.||..+...
T Consensus 309 ad~alnh~~F~kdp~p 324 (376)
T KOG0669|consen 309 ADQALNHDFFWKDPMP 324 (376)
T ss_pred hHhhhchhhhhcCCcc
Confidence 9999999999988776
No 282
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=1.3e-35 Score=304.22 Aligned_cols=200 Identities=31% Similarity=0.470 Sum_probs=176.2
Q ss_pred hcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEec
Q 005227 374 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 452 (707)
Q Consensus 374 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~ 452 (707)
.++|+..+.||+|+||.||+|... +++.||+|.+..... .+++.+|++++++++|+||+++++++......++|+||
T Consensus 2 ~~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~ 79 (256)
T cd06612 2 EEVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEY 79 (256)
T ss_pred cccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEec
Confidence 367889999999999999999976 488999999875432 56899999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCC
Q 005227 453 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 532 (707)
Q Consensus 453 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 532 (707)
+++++|.+++... ...+++..++.++.|++.||.|||+.+ ++|+||+|+||++++++.+||+|||++.......
T Consensus 80 ~~~~~L~~~l~~~-~~~l~~~~~~~~~~~l~~~l~~lh~~~---i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~-- 153 (256)
T cd06612 80 CGAGSVSDIMKIT-NKTLTEEEIAAILYQTLKGLEYLHSNK---KIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTM-- 153 (256)
T ss_pred CCCCcHHHHHHhC-ccCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcceEEECCCCcEEEcccccchhcccCc--
Confidence 9999999999653 346899999999999999999999998 9999999999999999999999999998654321
Q ss_pred CccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCC
Q 005227 533 GIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 586 (707)
Q Consensus 533 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~ 586 (707)
.......++..|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 154 -----~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~ 202 (256)
T cd06612 154 -----AKRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDI 202 (256)
T ss_pred -----cccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCc
Confidence 1122344788999999999999999999999999999999999999643
No 283
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-37 Score=347.32 Aligned_cols=276 Identities=24% Similarity=0.296 Sum_probs=221.5
Q ss_pred HHHHHHHhcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCChh---hHHHHHHHHHHHHccCCCcceeEEEEEEe
Q 005227 367 YGEMALATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ---GEKEFLTEIQFLSRLHHRNLVSLVGYCDE 442 (707)
Q Consensus 367 ~~~l~~~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~---~~~~~~~E~~~l~~l~h~nIv~l~~~~~~ 442 (707)
..++....++|.+.++||+|+||.|..++++ ++++||.|++.+..+- ...-|..|-.+|..-..+-|+.+.-.|++
T Consensus 67 v~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD 146 (1317)
T KOG0612|consen 67 VKELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQD 146 (1317)
T ss_pred HHHHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcC
Confidence 4566777889999999999999999999975 6899999999874332 33568889999999999999999999999
Q ss_pred CCeEEEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecc
Q 005227 443 EGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGL 522 (707)
Q Consensus 443 ~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGl 522 (707)
+.+.|+|||||+||+|-.++.+.. .+++..++.++..|.-||.-||+.| +|||||||+|||+|..|++|++|||.
T Consensus 147 ~~~LYlVMdY~pGGDlltLlSk~~--~~pE~~ArFY~aEiVlAldslH~mg---yVHRDiKPDNvLld~~GHikLADFGs 221 (1317)
T KOG0612|consen 147 ERYLYLVMDYMPGGDLLTLLSKFD--RLPEDWARFYTAEIVLALDSLHSMG---YVHRDIKPDNVLLDKSGHIKLADFGS 221 (1317)
T ss_pred ccceEEEEecccCchHHHHHhhcC--CChHHHHHHHHHHHHHHHHHHHhcc---ceeccCCcceeEecccCcEeeccchh
Confidence 999999999999999999997655 6999999999999999999999999 99999999999999999999999999
Q ss_pred cccCCCCCCCCccccceecccccCCCccchhhhcc-----CCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHh
Q 005227 523 SRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-----HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAY 597 (707)
Q Consensus 523 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~ 597 (707)
+-.+...+ .......+|||.|++||++.. +.|+...|+||+||++|||+.|..||.... ++
T Consensus 222 Clkm~~dG------~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYads-lv------- 287 (1317)
T KOG0612|consen 222 CLKMDADG------TVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADS-LV------- 287 (1317)
T ss_pred HHhcCCCC------cEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHH-HH-------
Confidence 87775433 344566789999999999963 578899999999999999999999995322 11
Q ss_pred hcccchhhccCCCCCCChHHHHHHHHHHHH--hcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCC
Q 005227 598 QSSMMFSVIDGNMGSYPSECVEKFIKLALK--CCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETP 675 (707)
Q Consensus 598 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~--c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R 675 (707)
+...+++.. ++.. | ...+.+..+.|||+++++ +|+.|
T Consensus 288 ---------------------eTY~KIm~hk~~l~F-----P--------------~~~~VSeeakdLI~~ll~-~~e~R 326 (1317)
T KOG0612|consen 288 ---------------------ETYGKIMNHKESLSF-----P--------------DETDVSEEAKDLIEALLC-DREVR 326 (1317)
T ss_pred ---------------------HHHHHHhchhhhcCC-----C--------------cccccCHHHHHHHHHHhc-Chhhh
Confidence 112222211 1111 1 001234445577777665 48899
Q ss_pred CC---CCcCCCCCCCCCCCCCCCcccccCccc
Q 005227 676 PS---SSSMLKHPYVSSDVSGSNLVSGVIPTI 704 (707)
Q Consensus 676 ~s---a~e~L~Hp~f~~~~~~~~~~~~~~~~~ 704 (707)
+. ++++-.||||.++.+ +.+...-||+
T Consensus 327 Lgrngiedik~HpFF~g~~W--~~iR~~~pP~ 356 (1317)
T KOG0612|consen 327 LGRNGIEDIKNHPFFEGIDW--DNIRESVPPV 356 (1317)
T ss_pred cccccHHHHHhCccccCCCh--hhhhhcCCCC
Confidence 88 999999999999999 4444433443
No 284
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=6.9e-36 Score=308.63 Aligned_cols=200 Identities=27% Similarity=0.411 Sum_probs=173.4
Q ss_pred cCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEecC
Q 005227 375 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 453 (707)
Q Consensus 375 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~ 453 (707)
++|+..+.||+|+||.||+|... +++.||+|.++.........+.+|+.+++.++||||+++++++...+..++||||+
T Consensus 9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~~ 88 (267)
T cd06645 9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEFC 88 (267)
T ss_pred HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEecc
Confidence 46778899999999999999964 68999999987655444556889999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCCC
Q 005227 454 SNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEG 533 (707)
Q Consensus 454 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 533 (707)
++++|.+++...+ .+++..++.++.|++.||.|||+.+ ++|+||||+||+++.++.+||+|||++.......
T Consensus 89 ~~~~L~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~--- 160 (267)
T cd06645 89 GGGSLQDIYHVTG--PLSESQIAYVSRETLQGLYYLHSKG---KMHRDIKGANILLTDNGHVKLADFGVSAQITATI--- 160 (267)
T ss_pred CCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEECcceeeeEccCcc---
Confidence 9999999986543 5899999999999999999999998 9999999999999999999999999987553211
Q ss_pred ccccceecccccCCCccchhhhc---cCCCCCchhhHHHHHHHHHHHcCCCCCCCC
Q 005227 534 IVPAHVSTVVKGTPGYLDPEYFL---THKLTDKSDVYSLGVVFLELLTGMQPISHG 586 (707)
Q Consensus 534 ~~~~~~~~~~~gt~~y~aPE~~~---~~~~s~~sDVwSlGvll~elltG~~pf~~~ 586 (707)
.......|+..|+|||++. ...++.++|||||||++|||++|..||...
T Consensus 161 ----~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~ 212 (267)
T cd06645 161 ----AKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDL 212 (267)
T ss_pred ----cccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccc
Confidence 1123346889999999985 456888999999999999999999998643
No 285
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.5e-37 Score=324.27 Aligned_cols=246 Identities=24% Similarity=0.370 Sum_probs=206.2
Q ss_pred ceEeeeCceEEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEecCCCCCHH
Q 005227 381 TQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLR 459 (707)
Q Consensus 381 ~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~ 459 (707)
-+||+|+||+||.|++. +...+|||-+.....+..+-+..|+..-++++|.|||+++|.|..+++.-+.||.++||+|.
T Consensus 581 vVLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLS 660 (1226)
T KOG4279|consen 581 VVLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLS 660 (1226)
T ss_pred EEeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHH
Confidence 37999999999999965 55679999998776666677889999999999999999999999999999999999999999
Q ss_pred HHHhhc-CCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEc-CCCcEEEeeecccccCCCCCCCCcccc
Q 005227 460 DQLSAK-SKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLD-HKFTAKVADFGLSRLAPVPDIEGIVPA 537 (707)
Q Consensus 460 ~~l~~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~-~~~~~kl~DFGla~~~~~~~~~~~~~~ 537 (707)
++|+.+ +.-.=.+.+.-.+.+||++||.|||++. |||||||-+||||+ -.|.+||+|||-++.+..- .
T Consensus 661 sLLrskWGPlKDNEstm~fYtkQILeGLkYLHen~---IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAgi-------n 730 (1226)
T KOG4279|consen 661 SLLRSKWGPLKDNESTMNFYTKQILEGLKYLHENK---IVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGI-------N 730 (1226)
T ss_pred HHHHhccCCCccchhHHHHHHHHHHHHhhhhhhcc---eeeccccCCcEEEeeccceEEecccccchhhccC-------C
Confidence 999763 3222378888999999999999999998 99999999999996 6799999999999876432 1
Q ss_pred ceecccccCCCccchhhhcc--CCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCCCCCCCh
Q 005227 538 HVSTVVKGTPGYLDPEYFLT--HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPS 615 (707)
Q Consensus 538 ~~~~~~~gt~~y~aPE~~~~--~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 615 (707)
.......||..|||||++.. ..|..++|||||||++.||.||++||..-.+..... ++.+ .-+..++.|+
T Consensus 731 P~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAM---FkVG-----myKvHP~iPe 802 (1226)
T KOG4279|consen 731 PCTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAM---FKVG-----MYKVHPPIPE 802 (1226)
T ss_pred ccccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhh---hhhc-----ceecCCCCcH
Confidence 23445679999999999976 468889999999999999999999997544422211 1111 1233466899
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005227 616 ECVEKFIKLALKCCQDETDARPSMSEVMR 644 (707)
Q Consensus 616 ~~~~~l~~l~~~c~~~~p~~RPt~~~v~~ 644 (707)
+...+...++.+|+..+|.+||++.++++
T Consensus 803 elsaeak~FilrcFepd~~~R~sA~~LL~ 831 (1226)
T KOG4279|consen 803 ELSAEAKNFILRCFEPDPCDRPSAKDLLQ 831 (1226)
T ss_pred HHHHHHHHHHHHHcCCCcccCccHHHhcc
Confidence 99999999999999999999999999875
No 286
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=2.8e-36 Score=310.14 Aligned_cols=239 Identities=24% Similarity=0.419 Sum_probs=191.8
Q ss_pred ceEeeeCceEEEEEEeCC--------CcEEEEEEeccCChhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEec
Q 005227 381 TQIGQGGYGKVYKGILPD--------GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 452 (707)
Q Consensus 381 ~~lG~G~fg~Vy~~~~~~--------~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~ 452 (707)
+.||+|+||+||+|.... ...||+|.+........+.+.+|+.+++.++||||+++++++...+..++||||
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~ 80 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEY 80 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEec
Confidence 468999999999998642 234888888665545556789999999999999999999999998999999999
Q ss_pred CCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCc--------EEEeeecccc
Q 005227 453 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFT--------AKVADFGLSR 524 (707)
Q Consensus 453 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~--------~kl~DFGla~ 524 (707)
+++|+|.++++... ..+++..++.++.||+.||+|||+.+ |+||||||+||+++.++. ++++|||++.
T Consensus 81 ~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~---iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~ 156 (258)
T cd05078 81 VKFGSLDTYLKKNK-NLINISWKLEVAKQLAWALHFLEDKG---LTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISI 156 (258)
T ss_pred CCCCcHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCccceEEEecccccccCCCceEEeccccccc
Confidence 99999999997643 35899999999999999999999998 999999999999987765 6999999886
Q ss_pred cCCCCCCCCccccceecccccCCCccchhhhcc-CCCCCchhhHHHHHHHHHHHcCC-CCCCCCchhHHHHHHHhhcccc
Q 005227 525 LAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGM-QPISHGKNIVREVNIAYQSSMM 602 (707)
Q Consensus 525 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDVwSlGvll~elltG~-~pf~~~~~~~~~~~~~~~~~~~ 602 (707)
..... ....++..|+|||++.+ ..++.++|||||||++|||++|. .|+..... ...... .
T Consensus 157 ~~~~~-----------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~-~~~~~~-~----- 218 (258)
T cd05078 157 TVLPK-----------EILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDS-QKKLQF-Y----- 218 (258)
T ss_pred ccCCc-----------hhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccH-HHHHHH-H-----
Confidence 54321 22457889999999987 45899999999999999999985 45433222 111111 0
Q ss_pred hhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 005227 603 FSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMREL 646 (707)
Q Consensus 603 ~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L 646 (707)
......+...+.++.+++.+||+.+|++||++.++++.|
T Consensus 219 -----~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l 257 (258)
T cd05078 219 -----EDRHQLPAPKWTELANLINQCMDYEPDFRPSFRAIIRDL 257 (258)
T ss_pred -----HccccCCCCCcHHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence 011223444557789999999999999999999999876
No 287
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=2.1e-35 Score=309.35 Aligned_cols=201 Identities=26% Similarity=0.418 Sum_probs=174.1
Q ss_pred hcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEec
Q 005227 374 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 452 (707)
Q Consensus 374 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~ 452 (707)
.+.|++.+.||+|+||.||+|... +++.||+|.+........+.+.+|+++++.++|+||+++++++..++..++||||
T Consensus 11 ~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 90 (292)
T cd06644 11 NEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEF 90 (292)
T ss_pred chhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEec
Confidence 357889999999999999999975 5899999999876666667889999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCC
Q 005227 453 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 532 (707)
Q Consensus 453 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 532 (707)
+++++|..++.+.. ..+++..++.++.|++.||+|||+.+ ++||||||+||+++.++.+||+|||++......
T Consensus 91 ~~~~~l~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~--- 163 (292)
T cd06644 91 CPGGAVDAIMLELD-RGLTEPQIQVICRQMLEALQYLHSMK---IIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKT--- 163 (292)
T ss_pred CCCCcHHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHhcCC---eeecCCCcceEEEcCCCCEEEccCccceecccc---
Confidence 99999988876543 45899999999999999999999998 999999999999999999999999998653221
Q ss_pred CccccceecccccCCCccchhhhc-----cCCCCCchhhHHHHHHHHHHHcCCCCCCC
Q 005227 533 GIVPAHVSTVVKGTPGYLDPEYFL-----THKLTDKSDVYSLGVVFLELLTGMQPISH 585 (707)
Q Consensus 533 ~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~s~~sDVwSlGvll~elltG~~pf~~ 585 (707)
........++..|+|||++. ...++.++|||||||++|||++|+.||..
T Consensus 164 ----~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~ 217 (292)
T cd06644 164 ----LQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHE 217 (292)
T ss_pred ----ccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCcc
Confidence 11122345788999999985 34578899999999999999999999864
No 288
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=8.6e-36 Score=310.26 Aligned_cols=202 Identities=29% Similarity=0.392 Sum_probs=175.7
Q ss_pred hcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEec
Q 005227 374 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 452 (707)
Q Consensus 374 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~ 452 (707)
.++|++.+.||+|+||+||+|... ++..||+|..........+.+.+|++++++++|+||+++++++......++||||
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEF 83 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeec
Confidence 356888999999999999999975 6899999999776655667899999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCC
Q 005227 453 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 532 (707)
Q Consensus 453 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 532 (707)
+++++|.+++.... ..+++..++.++.|++.||.|||+.+ |+|+||||+||+++.++.++|+|||++.......
T Consensus 84 ~~~~~L~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lh~~~---i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~-- 157 (280)
T cd06611 84 CDGGALDSIMLELE-RGLTEPQIRYVCRQMLEALNFLHSHK---VIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTL-- 157 (280)
T ss_pred cCCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChhhEEECCCCCEEEccCccchhhcccc--
Confidence 99999999986543 35899999999999999999999999 9999999999999999999999999987543211
Q ss_pred CccccceecccccCCCccchhhhc-----cCCCCCchhhHHHHHHHHHHHcCCCCCCCC
Q 005227 533 GIVPAHVSTVVKGTPGYLDPEYFL-----THKLTDKSDVYSLGVVFLELLTGMQPISHG 586 (707)
Q Consensus 533 ~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~s~~sDVwSlGvll~elltG~~pf~~~ 586 (707)
.......++..|+|||++. ...++.++|||||||++|||++|+.||...
T Consensus 158 -----~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~ 211 (280)
T cd06611 158 -----QKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHEL 211 (280)
T ss_pred -----cccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccC
Confidence 1123346889999999985 345778999999999999999999999643
No 289
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=1.1e-35 Score=304.73 Aligned_cols=200 Identities=27% Similarity=0.413 Sum_probs=174.1
Q ss_pred CCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCC--hhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEec
Q 005227 376 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 452 (707)
Q Consensus 376 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~ 452 (707)
+|+..+.||+|+||.||+|... +++.+|+|.+.... ....+.+.+|+++++.++|+||+++++.+...+..++||||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEY 80 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEec
Confidence 5788999999999999999964 78899999986543 23346788999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCC-CcEEEeeecccccCCCCCC
Q 005227 453 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHK-FTAKVADFGLSRLAPVPDI 531 (707)
Q Consensus 453 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~-~~~kl~DFGla~~~~~~~~ 531 (707)
+++++|.+++.......+++..+..++.++++||+|||+++ ++|+||||+||+++++ +.+||+|||.+.......
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~---i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~- 156 (256)
T cd08220 81 APGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKL---ILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKS- 156 (256)
T ss_pred CCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEEccCCCceecCCCc-
Confidence 99999999998766667899999999999999999999998 9999999999999855 468999999998654321
Q ss_pred CCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCC
Q 005227 532 EGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 586 (707)
Q Consensus 532 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~ 586 (707)
......++..|+|||.+.+..++.++||||||+++|+|++|+.||...
T Consensus 157 -------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~ 204 (256)
T cd08220 157 -------KAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAA 204 (256)
T ss_pred -------cccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccC
Confidence 122345788999999999888999999999999999999999998643
No 290
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=8.6e-36 Score=314.44 Aligned_cols=207 Identities=24% Similarity=0.387 Sum_probs=173.1
Q ss_pred cCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCCh---hhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEE
Q 005227 375 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 450 (707)
Q Consensus 375 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~ 450 (707)
++|+..+.||+|+||.||++... +++.||+|.+..... ...+.+.+|+++++.++|+||+++++++..++..++||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVM 80 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEE
Confidence 36888999999999999999975 678999999876432 22356889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCC
Q 005227 451 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 530 (707)
Q Consensus 451 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~ 530 (707)
||+++++|.+++... ..+++..+..++.|+++||+|||+.+ ++||||||+||++++++.+|++|||+++......
T Consensus 81 e~~~g~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~ 155 (305)
T cd05609 81 EYVEGGDCATLLKNI--GALPVDMARMYFAETVLALEYLHNYG---IVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSL 155 (305)
T ss_pred ecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCchHHEEECCCCCEEEeeCCCccccCcCc
Confidence 999999999999654 35899999999999999999999998 9999999999999999999999999987421111
Q ss_pred CCCc--------cccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCC
Q 005227 531 IEGI--------VPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 586 (707)
Q Consensus 531 ~~~~--------~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~ 586 (707)
.... ..........++..|+|||.+.+..++.++|||||||++|||++|..||...
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~ 219 (305)
T cd05609 156 TTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGD 219 (305)
T ss_pred cccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 0000 0001112245788999999999889999999999999999999999999643
No 291
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=5.7e-36 Score=310.73 Aligned_cols=238 Identities=24% Similarity=0.370 Sum_probs=188.4
Q ss_pred eEeeeCceEEEEEEeCC-------------------------CcEEEEEEeccCChhhHHHHHHHHHHHHccCCCcceeE
Q 005227 382 QIGQGGYGKVYKGILPD-------------------------GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSL 436 (707)
Q Consensus 382 ~lG~G~fg~Vy~~~~~~-------------------------~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~nIv~l 436 (707)
.||+|+||.||+|.+.. ...||+|++..........+.+|+.+++.++||||+++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~ 81 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV 81 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 58999999999997421 13589999876544445678899999999999999999
Q ss_pred EEEEEeCCeEEEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCC---
Q 005227 437 VGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKF--- 513 (707)
Q Consensus 437 ~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~--- 513 (707)
++++......++||||+++|+|..++... ...+++..+..++.||++||+|||+.+ |+||||||+|||+++.+
T Consensus 82 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~---iiH~dlkp~Nill~~~~~~~ 157 (274)
T cd05076 82 HGVCVRGSENIMVEEFVEHGPLDVCLRKE-KGRVPVAWKITVAQQLASALSYLEDKN---LVHGNVCAKNILLARLGLAE 157 (274)
T ss_pred EEEEEeCCceEEEEecCCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHcCC---ccCCCCCcccEEEeccCccc
Confidence 99999999999999999999999998653 335889999999999999999999988 99999999999997643
Q ss_pred ----cEEEeeecccccCCCCCCCCccccceecccccCCCccchhhhcc-CCCCCchhhHHHHHHHHHHH-cCCCCCCCCc
Q 005227 514 ----TAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELL-TGMQPISHGK 587 (707)
Q Consensus 514 ----~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDVwSlGvll~ell-tG~~pf~~~~ 587 (707)
.+|++|||++...... ....++..|+|||.+.+ ..++.++|||||||++|||+ +|+.||....
T Consensus 158 ~~~~~~kl~d~g~~~~~~~~-----------~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~ 226 (274)
T cd05076 158 GTSPFIKLSDPGVSFTALSR-----------EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERT 226 (274)
T ss_pred CccceeeecCCccccccccc-----------cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccC
Confidence 4899999988643211 12346788999998876 56899999999999999995 6899986433
Q ss_pred hhHHHHHHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 005227 588 NIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMREL 646 (707)
Q Consensus 588 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L 646 (707)
.... ..... . ....+......+.+++.+||+.+|++||++.++++.|
T Consensus 227 ~~~~--~~~~~---------~-~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~L 273 (274)
T cd05076 227 PSEK--ERFYE---------K-KHRLPEPSCKELATLISQCLTYEPTQRPSFRTILRDL 273 (274)
T ss_pred hHHH--HHHHH---------h-ccCCCCCCChHHHHHHHHHcccChhhCcCHHHHHHhh
Confidence 2111 11110 0 0112222335688999999999999999999998876
No 292
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=7.5e-36 Score=311.70 Aligned_cols=199 Identities=26% Similarity=0.428 Sum_probs=170.4
Q ss_pred cCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCC-hhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEec
Q 005227 375 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 452 (707)
Q Consensus 375 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~ 452 (707)
++|+..+.||+|+||.||+|... +++.||+|.+.... ......+.+|++++++++|+||+++++++...+..++||||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEY 80 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEee
Confidence 36788999999999999999975 78999999886532 22345788999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcC-CCCcCHHHHHHHHHHHHHHHHHHHhC-CCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCC
Q 005227 453 MSNGTLRDQLSAKS-KEPLGFAMRLSIALGSSRGILYLHTE-ADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 530 (707)
Q Consensus 453 ~~~gsL~~~l~~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~-~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~ 530 (707)
+++++|.+++.... ...+++..+..++.|++.||.|||+. + |+|+||||+||+++.++.+||+|||++......
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~- 156 (286)
T cd06622 81 MDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHN---IIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVAS- 156 (286)
T ss_pred cCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCC---EeeCCCCHHHEEECCCCCEEEeecCCcccccCC-
Confidence 99999999986532 23689999999999999999999974 6 999999999999999999999999998755321
Q ss_pred CCCccccceecccccCCCccchhhhccC------CCCCchhhHHHHHHHHHHHcCCCCCCC
Q 005227 531 IEGIVPAHVSTVVKGTPGYLDPEYFLTH------KLTDKSDVYSLGVVFLELLTGMQPISH 585 (707)
Q Consensus 531 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~------~~s~~sDVwSlGvll~elltG~~pf~~ 585 (707)
......++..|+|||.+.+. .++.++|||||||++|||++|+.||..
T Consensus 157 --------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~ 209 (286)
T cd06622 157 --------LAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPP 209 (286)
T ss_pred --------ccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCC
Confidence 12234578899999998654 357899999999999999999999964
No 293
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=2.2e-35 Score=306.80 Aligned_cols=247 Identities=26% Similarity=0.404 Sum_probs=195.9
Q ss_pred cCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCC-hhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEec
Q 005227 375 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 452 (707)
Q Consensus 375 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~ 452 (707)
..|+..+.||+|+||.||+|... +++.||+|.+.... ....+.+.+|++++++++|+||+++++++.+....++||||
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEY 83 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEec
Confidence 35777889999999999999975 68899999987543 33456789999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCC
Q 005227 453 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 532 (707)
Q Consensus 453 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 532 (707)
+++++|.+++.. .++++..+..++.|++.||+|||+.+ ++|+||+|+||++++++.++|+|||++.......
T Consensus 84 ~~~~~L~~~i~~---~~l~~~~~~~~~~~l~~~l~~lh~~~---ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~-- 155 (277)
T cd06640 84 LGGGSALDLLRA---GPFDEFQIATMLKEILKGLDYLHSEK---KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ-- 155 (277)
T ss_pred CCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCC---ccCcCCChhhEEEcCCCCEEEcccccceeccCCc--
Confidence 999999999854 35888999999999999999999988 9999999999999999999999999997654322
Q ss_pred CccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCCCCC
Q 005227 533 GIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGS 612 (707)
Q Consensus 533 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 612 (707)
.......++..|+|||++.+..++.++|||||||++|||++|+.||....... ... .........
T Consensus 156 -----~~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~-~~~---------~~~~~~~~~ 220 (277)
T cd06640 156 -----IKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMR-VLF---------LIPKNNPPT 220 (277)
T ss_pred -----cccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHh-Hhh---------hhhcCCCCC
Confidence 11223457889999999999899999999999999999999999986433211 000 001111222
Q ss_pred CChHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005227 613 YPSECVEKFIKLALKCCQDETDARPSMSEVMR 644 (707)
Q Consensus 613 ~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~ 644 (707)
.+..++..+.+++.+||+.+|++||++.++++
T Consensus 221 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 252 (277)
T cd06640 221 LTGEFSKPFKEFIDACLNKDPSFRPTAKELLK 252 (277)
T ss_pred CchhhhHHHHHHHHHHcccCcccCcCHHHHHh
Confidence 34455566666666666666666666666544
No 294
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=6.6e-36 Score=344.22 Aligned_cols=259 Identities=22% Similarity=0.338 Sum_probs=203.3
Q ss_pred HHHHHHhcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCC--hhhHHHHHHHHHHHHccCCCcceeEEEEEEeC-
Q 005227 368 GEMALATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE- 443 (707)
Q Consensus 368 ~~l~~~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~- 443 (707)
.+.....++|.+.+.||+|+||+||+|... ++..||+|.+.... ......+..|+.+++.++|||||+++++|...
T Consensus 6 ~~ge~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~ 85 (1021)
T PTZ00266 6 DDGESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKA 85 (1021)
T ss_pred cCCccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecC
Confidence 344455678999999999999999999965 67889999886532 23346789999999999999999999988543
Q ss_pred -CeEEEEEecCCCCCHHHHHhhc--CCCCcCHHHHHHHHHHHHHHHHHHHhCCC----CCeEecCCCCCCEEEcC-----
Q 005227 444 -GEQMLVYEFMSNGTLRDQLSAK--SKEPLGFAMRLSIALGSSRGILYLHTEAD----PPVFHRDIKASNILLDH----- 511 (707)
Q Consensus 444 -~~~~lV~E~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~----~~ivH~Dlkp~NILl~~----- 511 (707)
...+|||||+++|+|.++|... ....+++..++.|+.||+.||+|||+.+. .+||||||||+||||+.
T Consensus 86 ~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~l 165 (1021)
T PTZ00266 86 NQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHI 165 (1021)
T ss_pred CCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCcccc
Confidence 5689999999999999999753 23469999999999999999999998542 34999999999999964
Q ss_pred ------------CCcEEEeeecccccCCCCCCCCccccceecccccCCCccchhhhcc--CCCCCchhhHHHHHHHHHHH
Q 005227 512 ------------KFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT--HKLTDKSDVYSLGVVFLELL 577 (707)
Q Consensus 512 ------------~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~s~~sDVwSlGvll~ell 577 (707)
.+.+||+|||++....... ......||+.|+|||++.+ ..++.++|||||||++|||+
T Consensus 166 g~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s--------~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELL 237 (1021)
T PTZ00266 166 GKITAQANNLNGRPIAKIGDFGLSKNIGIES--------MAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELC 237 (1021)
T ss_pred ccccccccccCCCCceEEccCCccccccccc--------cccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHH
Confidence 3458999999997653221 1234568999999999864 45889999999999999999
Q ss_pred cCCCCCCCCchhHHHHHHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005227 578 TGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMR 644 (707)
Q Consensus 578 tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~ 644 (707)
+|+.||................ ........+..+.+++..||+.+|.+||++.+++.
T Consensus 238 TGk~PF~~~~~~~qli~~lk~~----------p~lpi~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~ 294 (1021)
T PTZ00266 238 SGKTPFHKANNFSQLISELKRG----------PDLPIKGKSKELNILIKNLLNLSAKERPSALQCLG 294 (1021)
T ss_pred HCCCCCCcCCcHHHHHHHHhcC----------CCCCcCCCCHHHHHHHHHHhcCChhHCcCHHHHhc
Confidence 9999997655433322221110 00111234567889999999999999999999984
No 295
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=6.4e-36 Score=309.13 Aligned_cols=249 Identities=32% Similarity=0.509 Sum_probs=200.0
Q ss_pred ceEeeeCceEEEEEEeCC-------CcEEEEEEeccCCh-hhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEec
Q 005227 381 TQIGQGGYGKVYKGILPD-------GTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 452 (707)
Q Consensus 381 ~~lG~G~fg~Vy~~~~~~-------~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~ 452 (707)
+.||+|+||.||+|...+ ++.||||.+..... .....+.+|+.+++.++||||+++++++...+..++||||
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMEL 80 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEec
Confidence 368999999999998642 25799998765432 3456788999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcC-----CCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCC-----cEEEeeecc
Q 005227 453 MSNGTLRDQLSAKS-----KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKF-----TAKVADFGL 522 (707)
Q Consensus 453 ~~~gsL~~~l~~~~-----~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~-----~~kl~DFGl 522 (707)
+++++|.+++.... ...+++..++.++.|++.||+|||+.+ ++|+||||+||++++++ .++++|||+
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~ 157 (269)
T cd05044 81 MEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMH---FIHRDLAARNCLVSEKGYDADRVVKIGDFGL 157 (269)
T ss_pred cCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCC---cccCCCChheEEEecCCCCCCcceEECCccc
Confidence 99999999997532 234789999999999999999999988 99999999999999887 899999999
Q ss_pred cccCCCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHhhccc
Q 005227 523 SRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSM 601 (707)
Q Consensus 523 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~ellt-G~~pf~~~~~~~~~~~~~~~~~~ 601 (707)
++........ .......++..|+|||++.+..++.++|||||||++|||++ |+.||....... ....
T Consensus 158 ~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~-~~~~------ 225 (269)
T cd05044 158 ARDIYKSDYY-----RKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQE-VLQH------ 225 (269)
T ss_pred cccccccccc-----ccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHHH-HHHH------
Confidence 9765332211 11122345678999999999999999999999999999998 999986544321 1111
Q ss_pred chhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 005227 602 MFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELE 647 (707)
Q Consensus 602 ~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~ 647 (707)
+..+.....+...+..+.+++.+||+.+|.+||++.++.+.|+
T Consensus 226 ---~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 268 (269)
T cd05044 226 ---VTAGGRLQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQ 268 (269)
T ss_pred ---HhcCCccCCcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 1111222344556788999999999999999999999998876
No 296
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-37 Score=300.39 Aligned_cols=261 Identities=20% Similarity=0.295 Sum_probs=206.3
Q ss_pred hcCCCc-cceEeeeCceEEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHcc-CCCcceeEEEEEEe----CCeE
Q 005227 374 TNNFNS-STQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDE----EGEQ 446 (707)
Q Consensus 374 ~~~~~~-~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~----~~~~ 446 (707)
+++|++ .++||-|-.|.|-.+..+ +++.+|+|++.+. ....+|++.--.. .|||||.++++|.. ....
T Consensus 60 tedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds-----~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcL 134 (400)
T KOG0604|consen 60 TEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS-----PKARREVELHWMASGHPHIVSIIDVYENSYQGRKCL 134 (400)
T ss_pred hhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC-----HHHHhHhhhhhhhcCCCceEEeehhhhhhccCceee
Confidence 445554 367999999999999965 7999999998653 3456788764444 79999999999843 3567
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEc---CCCcEEEeeeccc
Q 005227 447 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLD---HKFTAKVADFGLS 523 (707)
Q Consensus 447 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~---~~~~~kl~DFGla 523 (707)
.+|||.|+||.|.+.+++++...+++.++-.|+.||+.|+.|||+.+ |.||||||+|+|.. .+..+|++|||+|
T Consensus 135 LiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~n---IAHRDlKpENLLyt~t~~na~lKLtDfGFA 211 (400)
T KOG0604|consen 135 LIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMN---IAHRDLKPENLLYTTTSPNAPLKLTDFGFA 211 (400)
T ss_pred EeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcc---hhhccCChhheeeecCCCCcceEecccccc
Confidence 89999999999999999999999999999999999999999999999 99999999999996 4567999999999
Q ss_pred ccCCCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccch
Q 005227 524 RLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMF 603 (707)
Q Consensus 524 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~ 603 (707)
+.... .......+-|+.|.|||++...+|+...|+||+||+||-|++|.+||...... ... ..+.
T Consensus 212 K~t~~--------~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~------ais-pgMk 276 (400)
T KOG0604|consen 212 KETQE--------PGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL------AIS-PGMK 276 (400)
T ss_pred cccCC--------CccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCc------cCC-hhHH
Confidence 86542 12344567899999999999999999999999999999999999999643220 000 0111
Q ss_pred hhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCCC
Q 005227 604 SVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLK 683 (707)
Q Consensus 604 ~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~ 683 (707)
.-+......||+.++..+.+ .++|+|+.+|..+|++|+|++|.+.
T Consensus 277 ~rI~~gqy~FP~pEWs~VSe-----------------------------------~aKdlIR~LLkt~PteRlTI~~~m~ 321 (400)
T KOG0604|consen 277 RRIRTGQYEFPEPEWSCVSE-----------------------------------AAKDLIRKLLKTEPTERLTIEEVMD 321 (400)
T ss_pred hHhhccCccCCChhHhHHHH-----------------------------------HHHHHHHHHhcCCchhheeHHHhhc
Confidence 11122223355544443322 2347899999999999999999999
Q ss_pred CCCCCCCCC
Q 005227 684 HPYVSSDVS 692 (707)
Q Consensus 684 Hp~f~~~~~ 692 (707)
|||+++...
T Consensus 322 hpwi~~~~~ 330 (400)
T KOG0604|consen 322 HPWINQYEA 330 (400)
T ss_pred Cchhccccc
Confidence 999988765
No 297
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=5.8e-36 Score=311.10 Aligned_cols=246 Identities=27% Similarity=0.414 Sum_probs=198.1
Q ss_pred CCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCC-hhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEecC
Q 005227 376 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 453 (707)
Q Consensus 376 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~ 453 (707)
.|+..+.||+|+||.||+|... +++.||+|.+.... ....+.+.+|++++++++|+||+++++++......++||||+
T Consensus 5 ~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06642 5 LFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYL 84 (277)
T ss_pred HHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEcc
Confidence 4566788999999999999865 68899999987543 233467899999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCCC
Q 005227 454 SNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEG 533 (707)
Q Consensus 454 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 533 (707)
++++|.+++.. ..+++..+..++.|+++|+.|||+.+ ++|+||+|+||++++++.++++|||++.......
T Consensus 85 ~~~~L~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~~---ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~--- 155 (277)
T cd06642 85 GGGSALDLLKP---GPLEETYIATILREILKGLDYLHSER---KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ--- 155 (277)
T ss_pred CCCcHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHhcCC---eeccCCChheEEEeCCCCEEEccccccccccCcc---
Confidence 99999998853 35889999999999999999999988 9999999999999999999999999987654321
Q ss_pred ccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCCCCCC
Q 005227 534 IVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSY 613 (707)
Q Consensus 534 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 613 (707)
.......|+..|+|||++.+..++.++|||||||++|||++|+.|+....... .. ..+........
T Consensus 156 ----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~-~~---------~~~~~~~~~~~ 221 (277)
T cd06642 156 ----IKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMR-VL---------FLIPKNSPPTL 221 (277)
T ss_pred ----hhhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhh-HH---------hhhhcCCCCCC
Confidence 11223457889999999999999999999999999999999999986432211 00 01111112223
Q ss_pred ChHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005227 614 PSECVEKFIKLALKCCQDETDARPSMSEVMR 644 (707)
Q Consensus 614 ~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~ 644 (707)
+..++..+.+++.+||+.+|++||++.++++
T Consensus 222 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 252 (277)
T cd06642 222 EGQYSKPFKEFVEACLNKDPRFRPTAKELLK 252 (277)
T ss_pred CcccCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 3445567778888888888888888888876
No 298
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=7.8e-36 Score=310.85 Aligned_cols=267 Identities=27% Similarity=0.449 Sum_probs=207.5
Q ss_pred cCCCccceEeeeCceEEEEEEeC-----CCcEEEEEEeccCChh-hHHHHHHHHHHHHccCCCcceeEEEEEEe--CCeE
Q 005227 375 NNFNSSTQIGQGGYGKVYKGILP-----DGTVVAVKRAQEGSLQ-GEKEFLTEIQFLSRLHHRNLVSLVGYCDE--EGEQ 446 (707)
Q Consensus 375 ~~~~~~~~lG~G~fg~Vy~~~~~-----~~~~vavK~l~~~~~~-~~~~~~~E~~~l~~l~h~nIv~l~~~~~~--~~~~ 446 (707)
..|+..+.||+|+||.||+|.+. +++.||||.+...... ..+.+.+|+++++.++|+||+++++++.. ....
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~ 83 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSL 83 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCce
Confidence 45777899999999999999853 3689999999865443 45789999999999999999999999877 5578
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccC
Q 005227 447 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 526 (707)
Q Consensus 447 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~ 526 (707)
++||||+++++|.+++.... ..+++..+..++.|++.||+|||+.+ ++|+||||+||+++.++.++|+|||.+...
T Consensus 84 ~lv~e~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~l~~aL~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~ 159 (284)
T cd05038 84 RLIMEYLPSGSLRDYLQRHR-DQINLKRLLLFSSQICKGMDYLGSQR---YIHRDLAARNILVESEDLVKISDFGLAKVL 159 (284)
T ss_pred EEEEecCCCCCHHHHHHhCc-cccCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHhEEEcCCCCEEEccccccccc
Confidence 99999999999999997643 35899999999999999999999998 999999999999999999999999999876
Q ss_pred CCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHH-HHHH---hhcccc
Q 005227 527 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVRE-VNIA---YQSSMM 602 (707)
Q Consensus 527 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~-~~~~---~~~~~~ 602 (707)
...... ........++..|+|||.+.+..++.++|||||||++|||++|+.|+......... .... .....+
T Consensus 160 ~~~~~~----~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 235 (284)
T cd05038 160 PEDKDY----YYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRL 235 (284)
T ss_pred ccCCcc----eeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHH
Confidence 422110 01111233456799999999889999999999999999999999998543211100 0000 000000
Q ss_pred hhhc-cCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 005227 603 FSVI-DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 649 (707)
Q Consensus 603 ~~~~-~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~ 649 (707)
...+ .......+..++..+.+++.+||+.+|++||++.+++++|+.+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i 283 (284)
T cd05038 236 LELLKEGERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL 283 (284)
T ss_pred HHHHHcCCcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence 0111 1111223455668899999999999999999999999999865
No 299
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=1.5e-35 Score=303.83 Aligned_cols=251 Identities=34% Similarity=0.553 Sum_probs=204.6
Q ss_pred CCccceEeeeCceEEEEEEeCC-----CcEEEEEEeccCChh-hHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEE
Q 005227 377 FNSSTQIGQGGYGKVYKGILPD-----GTVVAVKRAQEGSLQ-GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 450 (707)
Q Consensus 377 ~~~~~~lG~G~fg~Vy~~~~~~-----~~~vavK~l~~~~~~-~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~ 450 (707)
|++.+.||+|+||.||++...+ +..||+|.+...... ..+.+.+|+++++.++|+||+++++++.+.+..++||
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~ 80 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVM 80 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEE
Confidence 3567899999999999999753 388999999765443 4678999999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCC
Q 005227 451 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 530 (707)
Q Consensus 451 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~ 530 (707)
||+++++|.+++.......+++..+..++.|++.||+|||+.+ ++|+||||+||++++++.++|+|||+++......
T Consensus 81 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~---~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~ 157 (258)
T smart00219 81 EYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKN---FIHRDLAARNCLVGENLVVKISDFGLSRDLYDDD 157 (258)
T ss_pred eccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCC---eeecccccceEEEccCCeEEEcccCCceeccccc
Confidence 9999999999997654434899999999999999999999998 9999999999999999999999999998765432
Q ss_pred CCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHhhcccchhhccCC
Q 005227 531 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGN 609 (707)
Q Consensus 531 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 609 (707)
.. ......++..|+|||.+.+..++.++||||+||+++||++ |+.||..... ...... +....
T Consensus 158 ~~------~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~-~~~~~~---------~~~~~ 221 (258)
T smart00219 158 YY------KKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSN-EEVLEY---------LKKGY 221 (258)
T ss_pred cc------ccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCH-HHHHHH---------HhcCC
Confidence 11 1112236789999999988899999999999999999999 7788764322 111111 11122
Q ss_pred CCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 005227 610 MGSYPSECVEKFIKLALKCCQDETDARPSMSEVMREL 646 (707)
Q Consensus 610 ~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L 646 (707)
....+...+..+.+++.+|++.+|++||++.++++.|
T Consensus 222 ~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 222 RLPKPENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred CCCCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 2233445677899999999999999999999988653
No 300
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=1.7e-35 Score=306.16 Aligned_cols=251 Identities=25% Similarity=0.344 Sum_probs=191.1
Q ss_pred eEeeeCceEEEEEEeCC---CcEEEEEEeccCCh-hhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEecCCCCC
Q 005227 382 QIGQGGYGKVYKGILPD---GTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGT 457 (707)
Q Consensus 382 ~lG~G~fg~Vy~~~~~~---~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gs 457 (707)
.||+|+||+||+|...+ ...+|+|.+..... .....+.+|+++++.++|+||+++++++......++||||+++|+
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g~ 81 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLGD 81 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCCc
Confidence 58999999999997543 45788998765432 234578899999999999999999999999999999999999999
Q ss_pred HHHHHhhcCC---CCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCCCc
Q 005227 458 LRDQLSAKSK---EPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGI 534 (707)
Q Consensus 458 L~~~l~~~~~---~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 534 (707)
|.+++..... ...++.....++.||+.||+|||+.+ |+||||||+|||+++++.+||+|||+++.....+..
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~-- 156 (269)
T cd05042 82 LKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQAD---FIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYY-- 156 (269)
T ss_pred HHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcC---EecccccHhheEecCCCcEEEeccccccccccchhe--
Confidence 9999976432 23567888999999999999999998 999999999999999999999999998754322100
Q ss_pred cccceecccccCCCccchhhhcc-------CCCCCchhhHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHhhcccchhhc
Q 005227 535 VPAHVSTVVKGTPGYLDPEYFLT-------HKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVI 606 (707)
Q Consensus 535 ~~~~~~~~~~gt~~y~aPE~~~~-------~~~s~~sDVwSlGvll~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~ 606 (707)
.......++..|+|||++.. ..++.++|||||||++|||++ |..||....+... ........ ...
T Consensus 157 ---~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~-~~~~~~~~-~~~-- 229 (269)
T cd05042 157 ---ITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQV-LKQVVREQ-DIK-- 229 (269)
T ss_pred ---eccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHH-HHHHhhcc-Ccc--
Confidence 01122345678999999753 456889999999999999999 7788865443211 11111110 001
Q ss_pred cCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 005227 607 DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMREL 646 (707)
Q Consensus 607 ~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L 646 (707)
......+..++..+.+++..|| .+|++||++.++++.+
T Consensus 230 -~~~~~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l 267 (269)
T cd05042 230 -LPKPQLDLKYSDRWYEVMQFCW-LDPETRPTAEEVHELL 267 (269)
T ss_pred -CCCCcccccCCHHHHHHHHHHh-cCcccccCHHHHHHHh
Confidence 1111234456677788899998 5999999999998875
No 301
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=9.5e-36 Score=310.72 Aligned_cols=199 Identities=31% Similarity=0.454 Sum_probs=173.5
Q ss_pred hcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCC-hhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEe
Q 005227 374 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 451 (707)
Q Consensus 374 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E 451 (707)
.++|++.+.||+|+||+||++... +++.||+|++.... ....+.+.+|+++++.++||||+++++++......++|||
T Consensus 4 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 83 (284)
T cd06620 4 NEDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCME 83 (284)
T ss_pred HHHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEe
Confidence 356788899999999999999964 68999999876543 2345688999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHh-CCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCC
Q 005227 452 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHT-EADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 530 (707)
Q Consensus 452 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~ 530 (707)
|+++++|.+++... ..+++..+..++.+++.||.|||+ .+ ++||||||+||++++++.++|+|||++......
T Consensus 84 ~~~~~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~~~---i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~- 157 (284)
T cd06620 84 FMDCGSLDRIYKKG--GPIPVEILGKIAVAVVEGLTYLYNVHR---IMHRDIKPSNILVNSRGQIKLCDFGVSGELINS- 157 (284)
T ss_pred cCCCCCHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHHhcC---eeccCCCHHHEEECCCCcEEEccCCcccchhhh-
Confidence 99999999998653 358999999999999999999997 46 999999999999999999999999998654221
Q ss_pred CCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCC
Q 005227 531 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 586 (707)
Q Consensus 531 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~ 586 (707)
......|+..|+|||++.+..++.++|||||||++||+++|+.||...
T Consensus 158 --------~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~ 205 (284)
T cd06620 158 --------IADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFS 205 (284)
T ss_pred --------ccCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCccc
Confidence 112346889999999998889999999999999999999999999743
No 302
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=9.4e-36 Score=311.27 Aligned_cols=264 Identities=25% Similarity=0.356 Sum_probs=202.2
Q ss_pred cCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCCh-hhHHHHHHHHHHHHccCCCcceeEEEEEEeC--CeEEEEE
Q 005227 375 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE--GEQMLVY 450 (707)
Q Consensus 375 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~--~~~~lV~ 450 (707)
++|+..+.||.|++|.||+|... +++.||+|.+..... ....++.+|++++++++|+||++++++|... +..++||
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 80 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAM 80 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEE
Confidence 46888999999999999999975 689999999875432 3456789999999999999999999998654 4689999
Q ss_pred ecCCCCCHHHHHhh--cCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCC
Q 005227 451 EFMSNGTLRDQLSA--KSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 528 (707)
Q Consensus 451 E~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~ 528 (707)
||+++++|.+++.. .....+++..+..++.|++.||+|||+.+ ++|+||+|+||++++++.++|+|||++.....
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~---i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~ 157 (287)
T cd06621 81 EYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRK---IIHRDIKPSNILLTRKGQVKLCDFGVSGELVN 157 (287)
T ss_pred EecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEecCCeEEEeeccccccccc
Confidence 99999999998764 23445889999999999999999999998 99999999999999999999999999875432
Q ss_pred CCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccC
Q 005227 529 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDG 608 (707)
Q Consensus 529 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 608 (707)
.. .....++..|+|||.+.+..++.++|||||||++|||++|+.||.......
T Consensus 158 ~~---------~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~------------------ 210 (287)
T cd06621 158 SL---------AGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPP------------------ 210 (287)
T ss_pred cc---------cccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCC------------------
Confidence 11 113356789999999999999999999999999999999999996432100
Q ss_pred CCCCCChHHHHHHHHHHHHh----cccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCCCC
Q 005227 609 NMGSYPSECVEKFIKLALKC----CQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKH 684 (707)
Q Consensus 609 ~~~~~~~~~~~~l~~l~~~c----~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~H 684 (707)
..+. ++.+.+..+ +...+..+-. .++...+|+.+|+..+|++|||+.|+++|
T Consensus 211 ---~~~~----~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~li~~~l~~~p~~Rpt~~eil~~ 266 (287)
T cd06621 211 ---LGPI----ELLSYIVNMPNPELKDEPGNGIK-----------------WSEEFKDFIKQCLEKDPTRRPTPWDMLEH 266 (287)
T ss_pred ---CChH----HHHHHHhcCCchhhccCCCCCCc-----------------hHHHHHHHHHHHcCCCcccCCCHHHHHhC
Confidence 0000 011111110 0000100000 01123478889999999999999999999
Q ss_pred CCCCCCCC
Q 005227 685 PYVSSDVS 692 (707)
Q Consensus 685 p~f~~~~~ 692 (707)
|||.....
T Consensus 267 ~~~~~~~~ 274 (287)
T cd06621 267 PWIKAQMK 274 (287)
T ss_pred cccccccc
Confidence 99955443
No 303
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=4.3e-36 Score=312.53 Aligned_cols=254 Identities=22% Similarity=0.292 Sum_probs=190.7
Q ss_pred eEeeeCceEEEEEEeC-CCcEEEEEEeccCCh---hhHHHHHHHHHHHHc---cCCCcceeEEEEEEeCCeEEEEEecCC
Q 005227 382 QIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSR---LHHRNLVSLVGYCDEEGEQMLVYEFMS 454 (707)
Q Consensus 382 ~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~---l~h~nIv~l~~~~~~~~~~~lV~E~~~ 454 (707)
.||+|+||.||++... +++.||+|.+..... .....+.+|..+++. .+|+||+.+++++...+..++||||++
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 4899999999999964 689999998865322 122334455444433 479999999999999999999999999
Q ss_pred CCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCCCc
Q 005227 455 NGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGI 534 (707)
Q Consensus 455 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 534 (707)
+++|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||++++++.++|+|||++.......
T Consensus 81 ~~~L~~~i~~~--~~l~~~~~~~i~~qi~~al~~lH~~~---ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~---- 151 (279)
T cd05633 81 GGDLHYHLSQH--GVFSEKEMRFYATEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKK---- 151 (279)
T ss_pred CCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---cCCCCCCHHHEEECCCCCEEEccCCcceeccccC----
Confidence 99999998654 35899999999999999999999998 9999999999999999999999999987543211
Q ss_pred cccceecccccCCCccchhhhcc-CCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCCCCCC
Q 005227 535 VPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSY 613 (707)
Q Consensus 535 ~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 613 (707)
.....|+..|+|||.+.+ ..++.++|||||||++|||++|..||........
T Consensus 152 -----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~---------------------- 204 (279)
T cd05633 152 -----PHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK---------------------- 204 (279)
T ss_pred -----ccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCH----------------------
Confidence 123458999999999874 5689999999999999999999999964221000
Q ss_pred ChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCC-----CCCcCCCCCCCC
Q 005227 614 PSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPP-----SSSSMLKHPYVS 688 (707)
Q Consensus 614 ~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~-----sa~e~L~Hp~f~ 688 (707)
..+.+... ...+ . ..+..+....++|.+||..||++|+ |++|+++||||.
T Consensus 205 -----~~~~~~~~---~~~~----~-------------~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h~~~~ 259 (279)
T cd05633 205 -----HEIDRMTL---TVNV----E-------------LPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEHVFFK 259 (279)
T ss_pred -----HHHHHHhh---cCCc----C-------------CccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhCcccc
Confidence 00000000 0000 0 0011122334677888888888888 699999999998
Q ss_pred CCCCCCCc
Q 005227 689 SDVSGSNL 696 (707)
Q Consensus 689 ~~~~~~~~ 696 (707)
+-.+....
T Consensus 260 ~~~~~~~~ 267 (279)
T cd05633 260 GIDWQQVY 267 (279)
T ss_pred CCCHhHHh
Confidence 86655443
No 304
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=2.7e-35 Score=304.13 Aligned_cols=202 Identities=30% Similarity=0.454 Sum_probs=170.6
Q ss_pred cCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCC-----hhhHHHHHHHHHHHHccCCCcceeEEEEEEeC--CeE
Q 005227 375 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS-----LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE--GEQ 446 (707)
Q Consensus 375 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~-----~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~--~~~ 446 (707)
.+|+..+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+.++++++|+||+++++++... ...
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL 81 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence 46889999999999999999964 68999999876432 12235688899999999999999999998653 578
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccC
Q 005227 447 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 526 (707)
Q Consensus 447 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~ 526 (707)
++||||+++++|.+++.... .+++...+.++.|++.||+|||+.+ |+||||||+||++++++.+||+|||+++..
T Consensus 82 ~l~~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~~l~~LH~~~---i~H~~l~p~nil~~~~~~~~l~dfg~~~~~ 156 (266)
T cd06651 82 TIFMEYMPGGSVKDQLKAYG--ALTESVTRKYTRQILEGMSYLHSNM---IVHRDIKGANILRDSAGNVKLGDFGASKRL 156 (266)
T ss_pred EEEEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEECCCCCEEEccCCCcccc
Confidence 89999999999999996543 4889999999999999999999988 999999999999999999999999999765
Q ss_pred CCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCC
Q 005227 527 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISH 585 (707)
Q Consensus 527 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~ 585 (707)
...... ........++..|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 157 ~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~ 211 (266)
T cd06651 157 QTICMS----GTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAE 211 (266)
T ss_pred cccccc----CCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccc
Confidence 321111 1111234578899999999999999999999999999999999999964
No 305
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=1.2e-35 Score=308.20 Aligned_cols=254 Identities=27% Similarity=0.427 Sum_probs=205.0
Q ss_pred cCCCccceEeeeCceEEEEEEeC------CCcEEEEEEeccCChh-hHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEE
Q 005227 375 NNFNSSTQIGQGGYGKVYKGILP------DGTVVAVKRAQEGSLQ-GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQM 447 (707)
Q Consensus 375 ~~~~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~l~~~~~~-~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~ 447 (707)
++|+..+.||+|+||+||+|+.+ +.+.|++|.+...... ..+.+.+|++++++++|+||+++++++.+.+..+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 84 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHY 84 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcce
Confidence 57888999999999999999964 3467999988764443 3467999999999999999999999999989999
Q ss_pred EEEecCCCCCHHHHHhhcCC-------CCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeee
Q 005227 448 LVYEFMSNGTLRDQLSAKSK-------EPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADF 520 (707)
Q Consensus 448 lV~E~~~~gsL~~~l~~~~~-------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DF 520 (707)
+||||+++|+|.+++..... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.++++||
T Consensus 85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~---i~H~dlkp~Nili~~~~~~~l~~~ 161 (275)
T cd05046 85 MILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNAR---FVHRDLAARNCLVSSQREVKVSLL 161 (275)
T ss_pred EEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcC---cccCcCccceEEEeCCCcEEEccc
Confidence 99999999999999976441 25899999999999999999999998 999999999999999999999999
Q ss_pred cccccCCCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHhhc
Q 005227 521 GLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQS 599 (707)
Q Consensus 521 Gla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~ellt-G~~pf~~~~~~~~~~~~~~~~ 599 (707)
|++....... ........++..|+|||.+.+..++.++||||||+++|||++ |..||...... ..+... .
T Consensus 162 ~~~~~~~~~~------~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~-~~~~~~-~- 232 (275)
T cd05046 162 SLSKDVYNSE------YYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDE-EVLNRL-Q- 232 (275)
T ss_pred ccccccCccc------ccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchH-HHHHHH-H-
Confidence 9987543221 111222345678999999998889999999999999999999 78888543321 111111 0
Q ss_pred ccchhhccCCC-CCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 005227 600 SMMFSVIDGNM-GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELE 647 (707)
Q Consensus 600 ~~~~~~~~~~~-~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~ 647 (707)
.+.. ...+..++..+.+++.+|++.+|.+||++.++++.|.
T Consensus 233 -------~~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~ 274 (275)
T cd05046 233 -------AGKLELPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG 274 (275)
T ss_pred -------cCCcCCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence 0111 1123455678999999999999999999999998764
No 306
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=1.1e-35 Score=310.38 Aligned_cols=212 Identities=27% Similarity=0.401 Sum_probs=176.8
Q ss_pred ccHHHHHHHhcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHcc-CCCcceeEEEEEE-
Q 005227 365 FTYGEMALATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-HHRNLVSLVGYCD- 441 (707)
Q Consensus 365 ~~~~~l~~~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~- 441 (707)
+.++.+..+.++|++.+.||+|+||.||+|... +++.||+|++.... .....+.+|+.+++.+ +|+||+++++++.
T Consensus 8 ~~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 86 (286)
T cd06638 8 IIFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH-DIDEEIEAEYNILKALSDHPNVVKFYGMYYK 86 (286)
T ss_pred EEeecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc-chHHHHHHHHHHHHHHhcCCCeeeeeeeeee
Confidence 445666778899999999999999999999964 68899999876532 2235688899999999 6999999999884
Q ss_pred ----eCCeEEEEEecCCCCCHHHHHhhc--CCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcE
Q 005227 442 ----EEGEQMLVYEFMSNGTLRDQLSAK--SKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTA 515 (707)
Q Consensus 442 ----~~~~~~lV~E~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ 515 (707)
..+..++||||+++++|.+++... ....+++..+..++.|+++||.|||+.+ |+||||||+||++++++.+
T Consensus 87 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nili~~~~~~ 163 (286)
T cd06638 87 KDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNK---TIHRDVKGNNILLTTEGGV 163 (286)
T ss_pred cccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCC---ccccCCCHHhEEECCCCCE
Confidence 345689999999999999988642 2346889999999999999999999998 9999999999999999999
Q ss_pred EEeeecccccCCCCCCCCccccceecccccCCCccchhhhcc-----CCCCCchhhHHHHHHHHHHHcCCCCCCCCc
Q 005227 516 KVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-----HKLTDKSDVYSLGVVFLELLTGMQPISHGK 587 (707)
Q Consensus 516 kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~s~~sDVwSlGvll~elltG~~pf~~~~ 587 (707)
||+|||+++...... .......|+..|+|||++.. ..++.++|||||||++|||++|+.||....
T Consensus 164 kl~dfg~~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~ 233 (286)
T cd06638 164 KLVDFGVSAQLTSTR-------LRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLH 233 (286)
T ss_pred EEccCCceeecccCC-------CccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCc
Confidence 999999987653221 11223458899999999853 457889999999999999999999996543
No 307
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=1.4e-35 Score=309.00 Aligned_cols=209 Identities=29% Similarity=0.459 Sum_probs=176.8
Q ss_pred cHHHHHHHhcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHcc-CCCcceeEEEEEEe-
Q 005227 366 TYGEMALATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDE- 442 (707)
Q Consensus 366 ~~~~l~~~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~- 442 (707)
++.++....+.|++.+.||+|+||.||+|... +++.||+|...... ....++..|+.+++++ +|+||+++++++..
T Consensus 7 ~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~ 85 (282)
T cd06636 7 DLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE-DEEEEIKLEINMLKKYSHHRNIATYYGAFIKK 85 (282)
T ss_pred hhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh-HHHHHHHHHHHHHHHhcCCCcEEEEeeehhcc
Confidence 45566667789999999999999999999964 68999999986533 2345688899999998 69999999999843
Q ss_pred -----CCeEEEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEE
Q 005227 443 -----EGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKV 517 (707)
Q Consensus 443 -----~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl 517 (707)
....++||||+++|+|.+++.......+++..++.++.|++.||+|||+.+ |+|+||||+||++++++.++|
T Consensus 86 ~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~---ivH~dl~~~nili~~~~~~~l 162 (282)
T cd06636 86 SPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHK---VIHRDIKGQNVLLTENAEVKL 162 (282)
T ss_pred cccCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEE
Confidence 457899999999999999998765566889999999999999999999998 999999999999999999999
Q ss_pred eeecccccCCCCCCCCccccceecccccCCCccchhhhc-----cCCCCCchhhHHHHHHHHHHHcCCCCCCC
Q 005227 518 ADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFL-----THKLTDKSDVYSLGVVFLELLTGMQPISH 585 (707)
Q Consensus 518 ~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~s~~sDVwSlGvll~elltG~~pf~~ 585 (707)
+|||++....... .......|+..|+|||.+. ...++.++|||||||++|||++|+.||..
T Consensus 163 ~dfg~~~~~~~~~-------~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~ 228 (282)
T cd06636 163 VDFGVSAQLDRTV-------GRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCD 228 (282)
T ss_pred eeCcchhhhhccc-------cCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccc
Confidence 9999987543211 1123346889999999986 35688899999999999999999999964
No 308
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00 E-value=4.3e-36 Score=321.92 Aligned_cols=281 Identities=23% Similarity=0.367 Sum_probs=203.1
Q ss_pred hcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCCh--hhHHHHHHHHHHHHccCCCcceeEEEEEEeC------C
Q 005227 374 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE------G 444 (707)
Q Consensus 374 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~------~ 444 (707)
.++|...+.||+|+||.||+|+.. +++.||||++..... .....+.+|+++++.++|+||+++++++... .
T Consensus 14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 93 (342)
T cd07879 14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQ 93 (342)
T ss_pred ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCc
Confidence 368999999999999999999964 789999999865321 2235688999999999999999999998654 3
Q ss_pred eEEEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccc
Q 005227 445 EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSR 524 (707)
Q Consensus 445 ~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~ 524 (707)
..++|+||+. .+|.++. ...+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++
T Consensus 94 ~~~lv~e~~~-~~l~~~~----~~~~~~~~~~~~~~qi~~aL~~LH~~~---i~H~dlkp~NIll~~~~~~kL~dfg~~~ 165 (342)
T cd07879 94 DFYLVMPYMQ-TDLQKIM----GHPLSEDKVQYLVYQMLCGLKYIHSAG---IIHRDLKPGNLAVNEDCELKILDFGLAR 165 (342)
T ss_pred eEEEEecccc-cCHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEeeCCCCc
Confidence 5699999996 4777665 234889999999999999999999998 9999999999999999999999999987
Q ss_pred cCCCCCCCCccccceecccccCCCccchhhhcc-CCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccch
Q 005227 525 LAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMF 603 (707)
Q Consensus 525 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~ 603 (707)
..... .....++..|+|||.+.+ ..++.++|||||||++|||++|+.||...... ..+......
T Consensus 166 ~~~~~----------~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~-~~~~~~~~~---- 230 (342)
T cd07879 166 HADAE----------MTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYL-DQLTQILKV---- 230 (342)
T ss_pred CCCCC----------CCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHh----
Confidence 54221 123456888999999876 56889999999999999999999999754332 111111110
Q ss_pred hhccCCCCCCChHHHHHHHHHH-HHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCC
Q 005227 604 SVIDGNMGSYPSECVEKFIKLA-LKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSML 682 (707)
Q Consensus 604 ~~~~~~~~~~~~~~~~~l~~l~-~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L 682 (707)
.+.........+.... .......|. .|. ..+....+..+....+|+.+||+.||++|++++|+|
T Consensus 231 ------~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--------~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l 295 (342)
T cd07879 231 ------TGVPGPEFVQKLEDKAAKSYIKSLPK-YPR--------KDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEAL 295 (342)
T ss_pred ------cCCCCHHHHHHhcccchHHHHhhcCC-ccc--------chHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHh
Confidence 0001111111110000 000000000 000 001112234455667999999999999999999999
Q ss_pred CCCCCCCCCC
Q 005227 683 KHPYVSSDVS 692 (707)
Q Consensus 683 ~Hp~f~~~~~ 692 (707)
.||||.+-..
T Consensus 296 ~h~~f~~~~~ 305 (342)
T cd07879 296 EHPYFDSFRD 305 (342)
T ss_pred cCcchhhccc
Confidence 9999977543
No 309
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=3.2e-35 Score=301.63 Aligned_cols=199 Identities=30% Similarity=0.478 Sum_probs=173.2
Q ss_pred CCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCC-----hhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEE
Q 005227 376 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS-----LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 449 (707)
Q Consensus 376 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~-----~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV 449 (707)
+|+..+.||+|+||.||+|... +++.|++|.+.... .+..+.+.+|+++++.++|+||+++++++......++|
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF 80 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence 4777899999999999999976 78999999886533 22346788999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCC
Q 005227 450 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 529 (707)
Q Consensus 450 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~ 529 (707)
|||+++++|.+++... ..+++..+..++.|++.||+|||+.+ |+|+||+|+||+++.++.+||+|||++......
T Consensus 81 ~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~ 155 (258)
T cd06632 81 LELVPGGSLAKLLKKY--GSFPEPVIRLYTRQILLGLEYLHDRN---TVHRDIKGANILVDTNGVVKLADFGMAKQVVEF 155 (258)
T ss_pred EEecCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEccCccceecccc
Confidence 9999999999999654 35889999999999999999999998 999999999999999999999999998765322
Q ss_pred CCCCccccceecccccCCCccchhhhccCC-CCCchhhHHHHHHHHHHHcCCCCCCCCc
Q 005227 530 DIEGIVPAHVSTVVKGTPGYLDPEYFLTHK-LTDKSDVYSLGVVFLELLTGMQPISHGK 587 (707)
Q Consensus 530 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~s~~sDVwSlGvll~elltG~~pf~~~~ 587 (707)
. ......|+..|+|||.+.... ++.++|+|||||++|+|++|+.||....
T Consensus 156 ~--------~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~ 206 (258)
T cd06632 156 S--------FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLE 206 (258)
T ss_pred c--------cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCc
Confidence 1 123345788999999998766 8999999999999999999999996543
No 310
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=100.00 E-value=4.4e-36 Score=317.16 Aligned_cols=288 Identities=25% Similarity=0.340 Sum_probs=203.4
Q ss_pred hcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCChh--hHHHHHHHHHHHHccCCCcceeEEEEEEeCC------
Q 005227 374 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ--GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG------ 444 (707)
Q Consensus 374 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~--~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~------ 444 (707)
.++|++.+.||+|+||.||+|... +++.||||++...... ....+.+|+++++.++|+||+++++++....
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 86 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK 86 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence 468999999999999999999965 6899999988653322 2346788999999999999999999874433
Q ss_pred --eEEEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecc
Q 005227 445 --EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGL 522 (707)
Q Consensus 445 --~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGl 522 (707)
..++||||+. +++...+... ...+++..+..++.|+++||+|||+.+ |+|+||||+||++++++.+||+|||+
T Consensus 87 ~~~~~lv~~~~~-~~l~~~~~~~-~~~~~~~~~~~i~~~l~~al~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~ 161 (311)
T cd07866 87 RGSVYMVTPYMD-HDLSGLLENP-SVKLTESQIKCYMLQLLEGINYLHENH---ILHRDIKAANILIDNQGILKIADFGL 161 (311)
T ss_pred CceEEEEEecCC-cCHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEECcCcc
Confidence 4699999996 4787777543 346999999999999999999999998 99999999999999999999999999
Q ss_pred cccCCCCCCCCcc----ccceecccccCCCccchhhhcc-CCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHh
Q 005227 523 SRLAPVPDIEGIV----PAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAY 597 (707)
Q Consensus 523 a~~~~~~~~~~~~----~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~ 597 (707)
++........... .........++..|+|||.+.+ ..++.++|||||||++|||++|+.||...... ......+
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~-~~~~~~~ 240 (311)
T cd07866 162 ARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDI-DQLHLIF 240 (311)
T ss_pred chhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHH
Confidence 9865432211100 0111233457888999998875 45889999999999999999999998654332 2111111
Q ss_pred hcccchhhccCCCCCCChHHHHHHHHHHHHh-cccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCC
Q 005227 598 QSSMMFSVIDGNMGSYPSECVEKFIKLALKC-CQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPP 676 (707)
Q Consensus 598 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c-~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~ 676 (707)
.. .. ..++........+.... +...+...+...+ .+........+|+.+||..||++||
T Consensus 241 ~~------~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~i~~~l~~~p~~R~ 300 (311)
T cd07866 241 KL------CG----TPTEETWPGWRSLPGCEGVHSFTNYPRTLEE----------RFGKLGPEGLDLLSKLLSLDPYKRL 300 (311)
T ss_pred HH------hC----CCChhhchhhhhcccccccccCCCCCccHHH----------HcccCChhHHHHHHHHcccCcccCc
Confidence 10 00 00000000000000000 0001111111111 1223335567899999999999999
Q ss_pred CCCcCCCCCCC
Q 005227 677 SSSSMLKHPYV 687 (707)
Q Consensus 677 sa~e~L~Hp~f 687 (707)
|+.|++.||||
T Consensus 301 t~~ell~~~~f 311 (311)
T cd07866 301 TASDALEHPYF 311 (311)
T ss_pred CHHHHhcCCCC
Confidence 99999999998
No 311
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=100.00 E-value=1.3e-35 Score=318.67 Aligned_cols=286 Identities=20% Similarity=0.328 Sum_probs=210.1
Q ss_pred HHHHHHHhcCCCccceEeeeCceEEEEEEe-CCCcEEEEEEeccCC--hhhHHHHHHHHHHHHccCCCcceeEEEEEEeC
Q 005227 367 YGEMALATNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE 443 (707)
Q Consensus 367 ~~~l~~~~~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~ 443 (707)
.+++...+++|++.+.||+|+||.||+|.. .+++.||+|++.... ....+.+.+|+.++++++|+||+++++++...
T Consensus 9 ~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~ 88 (345)
T cd07877 9 NKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPA 88 (345)
T ss_pred HHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeec
Confidence 345666789999999999999999999985 478999999987532 22345688899999999999999999988543
Q ss_pred ------CeEEEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEE
Q 005227 444 ------GEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKV 517 (707)
Q Consensus 444 ------~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl 517 (707)
...+++++++ +++|.+++... .+++..++.++.|+++||+|||+.+ |+||||||+||++++++.+||
T Consensus 89 ~~~~~~~~~~lv~~~~-~~~L~~~~~~~---~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIll~~~~~~kl 161 (345)
T cd07877 89 RSLEEFNDVYLVTHLM-GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKI 161 (345)
T ss_pred ccccccccEEEEehhc-ccCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCChHHEEEcCCCCEEE
Confidence 3468888887 78998888542 4899999999999999999999998 999999999999999999999
Q ss_pred eeecccccCCCCCCCCccccceecccccCCCccchhhhcc-CCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHH
Q 005227 518 ADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIA 596 (707)
Q Consensus 518 ~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~ 596 (707)
+|||+++.... ......++..|+|||++.+ ..++.++|||||||++|||++|+.||...... ......
T Consensus 162 ~dfg~~~~~~~----------~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~-~~~~~~ 230 (345)
T cd07877 162 LDFGLARHTDD----------EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI-DQLKLI 230 (345)
T ss_pred ecccccccccc----------cccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHH
Confidence 99999875421 1123457889999999876 56888999999999999999999999644332 111111
Q ss_pred hhcccchhhccCCCCCCChHHHH----HHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCC
Q 005227 597 YQSSMMFSVIDGNMGSYPSECVE----KFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKE 672 (707)
Q Consensus 597 ~~~~~~~~~~~~~~~~~~~~~~~----~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP 672 (707)
.... ...+..... ...+....++...|..+.. ......++...+||.+||..||
T Consensus 231 ~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~li~~~L~~dp 288 (345)
T cd07877 231 LRLV----------GTPGAELLKKISSESARNYIQSLTQMPKMNFA------------NVFIGANPLAVDLLEKMLVLDS 288 (345)
T ss_pred HHHh----------CCCCHHHHhhcccHhHHHHHHHhcccCCcchh------------hhcCCCCHHHHHHHHHHcCCCh
Confidence 0000 000111110 0111111122222211110 0111234556789999999999
Q ss_pred CCCCCCCcCCCCCCCCCCCC
Q 005227 673 ETPPSSSSMLKHPYVSSDVS 692 (707)
Q Consensus 673 ~~R~sa~e~L~Hp~f~~~~~ 692 (707)
++|+|+.++|+||||.....
T Consensus 289 ~~R~t~~e~l~h~~f~~~~~ 308 (345)
T cd07877 289 DKRITAAQALAHAYFAQYHD 308 (345)
T ss_pred hhcCCHHHHhcChhhhhcCC
Confidence 99999999999999985443
No 312
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=3.2e-35 Score=307.80 Aligned_cols=211 Identities=30% Similarity=0.444 Sum_probs=176.1
Q ss_pred ccHHHHHHHhcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHcc-CCCcceeEEEEEEe
Q 005227 365 FTYGEMALATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDE 442 (707)
Q Consensus 365 ~~~~~l~~~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~ 442 (707)
++.+++..++++|++.+.||+|+||.||+|... +++.+|+|.+.... .....+.+|+.+++++ +|||++++++++..
T Consensus 12 ~~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~ 90 (291)
T cd06639 12 LGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS-DVDEEIEAEYNILQSLPNHPNVVKFYGMFYK 90 (291)
T ss_pred hhcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc-cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEe
Confidence 344556667889999999999999999999964 78999999986532 2345778899999999 89999999999865
Q ss_pred C-----CeEEEEEecCCCCCHHHHHhhc--CCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcE
Q 005227 443 E-----GEQMLVYEFMSNGTLRDQLSAK--SKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTA 515 (707)
Q Consensus 443 ~-----~~~~lV~E~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ 515 (707)
. +..++||||+++++|.++++.. ....+++..++.++.|++.||+|||+.+ ++|+||||+||++++++.+
T Consensus 91 ~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dlkp~nili~~~~~~ 167 (291)
T cd06639 91 ADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNR---IIHRDVKGNNILLTTEGGV 167 (291)
T ss_pred ccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHEEEcCCCCE
Confidence 3 3589999999999999998642 3346899999999999999999999998 9999999999999999999
Q ss_pred EEeeecccccCCCCCCCCccccceecccccCCCccchhhhccC-----CCCCchhhHHHHHHHHHHHcCCCCCCCC
Q 005227 516 KVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTH-----KLTDKSDVYSLGVVFLELLTGMQPISHG 586 (707)
Q Consensus 516 kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~s~~sDVwSlGvll~elltG~~pf~~~ 586 (707)
||+|||++....... .......|+..|+|||++... .++.++|||||||++|||++|+.||...
T Consensus 168 kl~dfg~~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~ 236 (291)
T cd06639 168 KLVDFGVSAQLTSTR-------LRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDM 236 (291)
T ss_pred EEeecccchhccccc-------ccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCC
Confidence 999999987654321 112234578899999998643 3688999999999999999999999654
No 313
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=100.00 E-value=5.2e-36 Score=321.31 Aligned_cols=284 Identities=23% Similarity=0.352 Sum_probs=207.1
Q ss_pred cCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHccCCCcceeEEEEEEeC----------
Q 005227 375 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE---------- 443 (707)
Q Consensus 375 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~---------- 443 (707)
.+|...+.||.|+||.||+|... +++.||+|.+........+.+.+|++++++++||||+++++++...
T Consensus 5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~ 84 (342)
T cd07854 5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGS 84 (342)
T ss_pred cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhccccccccccccc
Confidence 68999999999999999999964 6899999998766555567789999999999999999999876543
Q ss_pred ----CeEEEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEc-CCCcEEEe
Q 005227 444 ----GEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLD-HKFTAKVA 518 (707)
Q Consensus 444 ----~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~-~~~~~kl~ 518 (707)
...++||||++ ++|.+++.. ..+++..++.++.||+.||.|||+.+ |+||||||+||+++ +++.+|++
T Consensus 85 ~~~~~~~~lv~e~~~-~~L~~~~~~---~~l~~~~~~~~~~qi~~aL~~LH~~g---ivH~dikp~Nili~~~~~~~kl~ 157 (342)
T cd07854 85 LTELNSVYIVQEYME-TDLANVLEQ---GPLSEEHARLFMYQLLRGLKYIHSAN---VLHRDLKPANVFINTEDLVLKIG 157 (342)
T ss_pred ccccceEEEEeeccc-ccHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEcCCCceEEEC
Confidence 35789999996 599888853 24889999999999999999999998 99999999999997 45678999
Q ss_pred eecccccCCCCCCCCccccceecccccCCCccchhhhcc-CCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHh
Q 005227 519 DFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAY 597 (707)
Q Consensus 519 DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~ 597 (707)
|||+++........ ........++..|+|||.+.+ ..++.++|||||||++|||++|+.||.............
T Consensus 158 dfg~~~~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~- 232 (342)
T cd07854 158 DFGLARIVDPHYSH----KGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLIL- 232 (342)
T ss_pred CcccceecCCcccc----ccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH-
Confidence 99999765322110 111122357889999998754 568889999999999999999999997654432211111
Q ss_pred hcccchhhccCCCCCCChHHHHHH-HHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCC
Q 005227 598 QSSMMFSVIDGNMGSYPSECVEKF-IKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPP 676 (707)
Q Consensus 598 ~~~~~~~~~~~~~~~~~~~~~~~l-~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~ 676 (707)
+. .+....+....+ ..+...+.......+.+..++ .+..+....+|+.+||+.||++|+
T Consensus 233 ---------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~li~~~L~~dP~~R~ 292 (342)
T cd07854 233 ---------ES-VPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDL----------LPGVNPEALDFLEQILTFNPMDRL 292 (342)
T ss_pred ---------Hh-cCCCChHHhhhhhhhhhhhhhhcccccCCCHHHH----------ccCCCHHHHHHHHHHhCCCchhcc
Confidence 00 001111111111 122222221111112222211 233445566899999999999999
Q ss_pred CCCcCCCCCCCCCC
Q 005227 677 SSSSMLKHPYVSSD 690 (707)
Q Consensus 677 sa~e~L~Hp~f~~~ 690 (707)
|++|+|+||||...
T Consensus 293 t~~ell~h~~~~~~ 306 (342)
T cd07854 293 TAEEALMHPYMSCY 306 (342)
T ss_pred CHHHHhCCCccccc
Confidence 99999999999743
No 314
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=5.9e-35 Score=301.41 Aligned_cols=202 Identities=29% Similarity=0.443 Sum_probs=170.3
Q ss_pred cCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCC-----hhhHHHHHHHHHHHHccCCCcceeEEEEEEeC--CeE
Q 005227 375 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS-----LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE--GEQ 446 (707)
Q Consensus 375 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~-----~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~--~~~ 446 (707)
.+|++.+.||+|+||.||+|... +++.||||.+.... ....+.+.+|++++++++|+||+++++++.+. ...
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL 81 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence 47889999999999999999964 68999999875321 12235788899999999999999999998663 467
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccC
Q 005227 447 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 526 (707)
Q Consensus 447 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~ 526 (707)
++||||+++++|.+++.... .+++..+..++.|++.||+|||+.+ ++|+||||+||++++++.++|+|||+++..
T Consensus 82 ~~v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~l~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~ 156 (265)
T cd06652 82 SIFMEHMPGGSIKDQLKSYG--ALTENVTRKYTRQILEGVSYLHSNM---IVHRDIKGANILRDSVGNVKLGDFGASKRL 156 (265)
T ss_pred EEEEEecCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEecCCCCEEECcCcccccc
Confidence 89999999999999996543 4788889999999999999999998 999999999999999999999999999865
Q ss_pred CCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCC
Q 005227 527 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISH 585 (707)
Q Consensus 527 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~ 585 (707)
...... ........|+..|+|||.+.+..++.++|||||||++|||++|+.||..
T Consensus 157 ~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~ 211 (265)
T cd06652 157 QTICLS----GTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAE 211 (265)
T ss_pred cccccc----ccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCc
Confidence 322110 1112234588899999999988899999999999999999999999864
No 315
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=3.5e-35 Score=301.61 Aligned_cols=237 Identities=24% Similarity=0.413 Sum_probs=190.0
Q ss_pred ceEeeeCceEEEEEEeCC-C----------cEEEEEEeccCChhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEE
Q 005227 381 TQIGQGGYGKVYKGILPD-G----------TVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 449 (707)
Q Consensus 381 ~~lG~G~fg~Vy~~~~~~-~----------~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV 449 (707)
+.||+|+||.||+|.+.+ + ..|++|.+...... ...+.+|+.+++.++|+||+++++++.. ...++|
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv 78 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMV 78 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEE
Confidence 468999999999999754 3 25788877654433 6788999999999999999999999988 778999
Q ss_pred EecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCC-------cEEEeeecc
Q 005227 450 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKF-------TAKVADFGL 522 (707)
Q Consensus 450 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~-------~~kl~DFGl 522 (707)
|||+++|+|.+++..... .+++..+..++.||+.||+|||+.+ |+||||||+||+++.++ .+||+|||+
T Consensus 79 ~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~ 154 (259)
T cd05037 79 EEYVKFGPLDVFLHREKN-NVSLHWKLDVAKQLASALHYLEDKK---LVHGNVCGKNILVARYGLNEGYVPFIKLSDPGI 154 (259)
T ss_pred EEcCCCCcHHHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHhhCC---eecccCccceEEEecCccccCCceeEEeCCCCc
Confidence 999999999999976432 6899999999999999999999988 99999999999999888 799999999
Q ss_pred cccCCCCCCCCccccceecccccCCCccchhhhccC--CCCCchhhHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHhhc
Q 005227 523 SRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTH--KLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQS 599 (707)
Q Consensus 523 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~s~~sDVwSlGvll~ellt-G~~pf~~~~~~~~~~~~~~~~ 599 (707)
+..... .....++..|+|||++.+. .++.++|||||||++|||++ |..||...... .... .+.
T Consensus 155 a~~~~~-----------~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~-~~~~-~~~- 220 (259)
T cd05037 155 PITVLS-----------REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSS-EKER-FYQ- 220 (259)
T ss_pred cccccc-----------ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCch-hHHH-HHh-
Confidence 876432 1123466789999999876 78999999999999999999 57777544321 1111 111
Q ss_pred ccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 005227 600 SMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMREL 646 (707)
Q Consensus 600 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L 646 (707)
.... .+......+.+++.+||..+|++||++.++++.|
T Consensus 221 -------~~~~--~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l 258 (259)
T cd05037 221 -------DQHR--LPMPDCAELANLINQCWTYDPTKRPSFRAILRDL 258 (259)
T ss_pred -------cCCC--CCCCCchHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence 1111 1111127888999999999999999999998875
No 316
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=8.7e-36 Score=310.28 Aligned_cols=276 Identities=24% Similarity=0.358 Sum_probs=199.0
Q ss_pred CCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCCh-hhHHHHHHHHHHHHccC-CCcceeEEEEEEeC--CeEEEEEe
Q 005227 377 FNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLH-HRNLVSLVGYCDEE--GEQMLVYE 451 (707)
Q Consensus 377 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~--~~~~lV~E 451 (707)
|++.+.||+|+||.||+|... +++.||+|++..... .......+|+.+++++. |+|++++++++.+. +..++|||
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e 80 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFE 80 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEe
Confidence 567889999999999999964 789999999875322 22334567899999885 99999999999887 88999999
Q ss_pred cCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCC
Q 005227 452 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 531 (707)
Q Consensus 452 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 531 (707)
|++ ++|.+.+.... ..+++..++.++.|++.||+|||+.+ ++||||||+||++++ +.+||+|||+++......
T Consensus 81 ~~~-~~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~---i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~- 153 (282)
T cd07831 81 LMD-MNLYELIKGRK-RPLPEKRVKSYMYQLLKSLDHMHRNG---IFHRDIKPENILIKD-DILKLADFGSCRGIYSKP- 153 (282)
T ss_pred cCC-ccHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCC---ceecccCHHHEEEcC-CCeEEEecccccccccCC-
Confidence 996 58888886543 46899999999999999999999998 999999999999999 999999999998653221
Q ss_pred CCccccceecccccCCCccchhhhcc-CCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCCC
Q 005227 532 EGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 610 (707)
Q Consensus 532 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 610 (707)
......++..|+|||++.. ..++.++|||||||++|||++|+.||...... +.+..... ..
T Consensus 154 -------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~-~~~~~~~~----------~~ 215 (282)
T cd07831 154 -------PYTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNEL-DQIAKIHD----------VL 215 (282)
T ss_pred -------CcCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHH-HHHHHHHH----------Hc
Confidence 1122357889999998754 56788999999999999999999999654332 11111100 00
Q ss_pred CCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCCCCCCC
Q 005227 611 GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYV 687 (707)
Q Consensus 611 ~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f 687 (707)
+..+......+.. ....-...|..-+. .+....+.......+++.+||..+|++|||++++|+||||
T Consensus 216 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~~~~ 282 (282)
T cd07831 216 GTPDAEVLKKFRK-SRHMNYNFPSKKGT---------GLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRHPYF 282 (282)
T ss_pred CCCCHHHHHhhcc-cccccccCcccccc---------cHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhCCCC
Confidence 1111111000000 00000000000000 0111122335566789999999999999999999999998
No 317
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=8.9e-36 Score=306.92 Aligned_cols=192 Identities=24% Similarity=0.382 Sum_probs=168.1
Q ss_pred EeeeCceEEEEEEeC-CCcEEEEEEeccCCh---hhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEecCCCCCH
Q 005227 383 IGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTL 458 (707)
Q Consensus 383 lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL 458 (707)
||.|+||.||+|... +++.||+|.+..... ...+.+.+|+++++.++|+||+++++++.++...++||||+++++|
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence 689999999999975 589999999865332 2346789999999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCCCccccc
Q 005227 459 RDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAH 538 (707)
Q Consensus 459 ~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~ 538 (707)
.+++.+. ..+++..+..++.|+++||+|||+.+ ++|+||+|+||++++++.++|+|||++.......
T Consensus 81 ~~~l~~~--~~l~~~~~~~~~~~i~~~l~~lH~~~---~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~-------- 147 (262)
T cd05572 81 WTILRDR--GLFDEYTARFYIACVVLAFEYLHNRG---IIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ-------- 147 (262)
T ss_pred HHHHhhc--CCCCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCHHHEEEcCCCCEEEeeCCcccccCccc--------
Confidence 9999654 34889999999999999999999988 9999999999999999999999999998654321
Q ss_pred eecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCc
Q 005227 539 VSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 587 (707)
Q Consensus 539 ~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~~ 587 (707)
......++..|+|||.+.+..++.++|+||||+++|||++|..||....
T Consensus 148 ~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~ 196 (262)
T cd05572 148 KTWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDD 196 (262)
T ss_pred ccccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCC
Confidence 1223457889999999998889999999999999999999999996543
No 318
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=3.9e-35 Score=303.99 Aligned_cols=255 Identities=29% Similarity=0.433 Sum_probs=200.1
Q ss_pred CCccceEeeeCceEEEEEEeC----CCcEEEEEEeccCC--hhhHHHHHHHHHHHHccCCCcceeEEEEEEeCC------
Q 005227 377 FNSSTQIGQGGYGKVYKGILP----DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG------ 444 (707)
Q Consensus 377 ~~~~~~lG~G~fg~Vy~~~~~----~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~------ 444 (707)
|.+.+.||+|+||+||+|.+. +++.||||++.... ....+++.+|++++++++||||+++++++....
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP 80 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence 567789999999999999853 36889999987542 233567889999999999999999999886532
Q ss_pred eEEEEEecCCCCCHHHHHhhc----CCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeee
Q 005227 445 EQMLVYEFMSNGTLRDQLSAK----SKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADF 520 (707)
Q Consensus 445 ~~~lV~E~~~~gsL~~~l~~~----~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DF 520 (707)
..++++||+++|+|.+++... ....+++...+.++.|++.||+|||+.+ |+||||||+||++++++.+||+||
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~nili~~~~~~kl~df 157 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKN---FIHRDLAARNCMLNENMTVCVADF 157 (273)
T ss_pred ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---EeecccchhhEEEcCCCCEEECcc
Confidence 247899999999999887532 1235789999999999999999999998 999999999999999999999999
Q ss_pred cccccCCCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHhhc
Q 005227 521 GLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQS 599 (707)
Q Consensus 521 Gla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~ellt-G~~pf~~~~~~~~~~~~~~~~ 599 (707)
|+++........ .......++..|++||.+....++.++|||||||++|||++ |+.||..... .......
T Consensus 158 g~~~~~~~~~~~-----~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~-~~~~~~~--- 228 (273)
T cd05074 158 GLSKKIYSGDYY-----RQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVEN-SEIYNYL--- 228 (273)
T ss_pred cccccccCCcce-----ecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCH-HHHHHHH---
Confidence 999865432110 01112335678999999999999999999999999999999 8888864432 1111111
Q ss_pred ccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 005227 600 SMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 649 (707)
Q Consensus 600 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~ 649 (707)
........+..++..+.+++.+|++.+|++||++.++++.|+++
T Consensus 229 ------~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 229 ------IKGNRLKQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred ------HcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 11111222345567899999999999999999999999999865
No 319
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=3.1e-37 Score=318.01 Aligned_cols=252 Identities=25% Similarity=0.387 Sum_probs=210.5
Q ss_pred cceEeeeCceEEEEEEeC-CCcEEEEEEeccCCh--hhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEecCCCC
Q 005227 380 STQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNG 456 (707)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~g 456 (707)
.++||.|.||+||-|+++ +|+.||||++.+... ..+.++.+|+.+|++++||.||.+.-.|+..+..++|||-+ +|
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl-~G 647 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKL-HG 647 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhh-cc
Confidence 588999999999999965 899999999876432 34578899999999999999999999999999999999999 56
Q ss_pred CHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCC---CcEEEeeecccccCCCCCCCC
Q 005227 457 TLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHK---FTAKVADFGLSRLAPVPDIEG 533 (707)
Q Consensus 457 sL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~---~~~kl~DFGla~~~~~~~~~~ 533 (707)
+..+++-......+++.....++.||+.||.|||.++ |+|+||||+|||+.+. .++||+|||.|+...+.
T Consensus 648 DMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~kn---IvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEk---- 720 (888)
T KOG4236|consen 648 DMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKN---IVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEK---- 720 (888)
T ss_pred hHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcc---eeeccCCchheeeccCCCCCceeeccccceeecchh----
Confidence 7777776666667999999999999999999999999 9999999999999643 47999999999988653
Q ss_pred ccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCCCCCC
Q 005227 534 IVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSY 613 (707)
Q Consensus 534 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 613 (707)
.....+.||+.|.|||+++.+.|...-|+||.||++|--++|..||..+.+..++..-+ .
T Consensus 721 ----sFRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEdIndQIQNA----a------------ 780 (888)
T KOG4236|consen 721 ----SFRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDINDQIQNA----A------------ 780 (888)
T ss_pred ----hhhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccchhHHhhcc----c------------
Confidence 34567889999999999999999999999999999999999999998766644432211 0
Q ss_pred ChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCCCCCCCCCCC
Q 005227 614 PSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSSDV 691 (707)
Q Consensus 614 ~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f~~~~ 691 (707)
-+.-.+| ..+.+..+.|||+.+|+..=++|.|.+..|.|||+....
T Consensus 781 -------------FMyPp~P-------------------W~eis~~AidlIn~LLqVkm~kRysvdk~lsh~Wlq~yq 826 (888)
T KOG4236|consen 781 -------------FMYPPNP-------------------WSEISPEAIDLINNLLQVKMRKRYSVDKSLSHPWLQDYQ 826 (888)
T ss_pred -------------cccCCCc-------------------hhhcCHHHHHHHHHHHHHHHHHhcchHhhccchhhhcch
Confidence 0011111 123345667899999999999999999999999997654
No 320
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=5e-35 Score=301.39 Aligned_cols=203 Identities=32% Similarity=0.468 Sum_probs=174.9
Q ss_pred CCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCChh--hHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEec
Q 005227 376 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ--GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 452 (707)
Q Consensus 376 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~--~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~ 452 (707)
+|+..+.||+|+||.||+|... +++.||+|.+...... ..+.+.+|+++++.++|+||+++++++...+..++|+||
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEY 80 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEec
Confidence 5888999999999999999964 7899999998765443 457899999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCC
Q 005227 453 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 532 (707)
Q Consensus 453 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 532 (707)
+++++|.+++... ..+++..+..++.++++||+|||+.+ |+|+||+|+||++++++.+||+|||++.........
T Consensus 81 ~~~~~L~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lh~~~---i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~ 155 (264)
T cd06626 81 CSGGTLEELLEHG--RILDEHVIRVYTLQLLEGLAYLHSHG---IVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTT 155 (264)
T ss_pred CCCCcHHHHHhhc--CCCChHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEcccccccccCCCCCc
Confidence 9999999999654 34788999999999999999999999 999999999999999999999999999876433211
Q ss_pred CccccceecccccCCCccchhhhccCC---CCCchhhHHHHHHHHHHHcCCCCCCCC
Q 005227 533 GIVPAHVSTVVKGTPGYLDPEYFLTHK---LTDKSDVYSLGVVFLELLTGMQPISHG 586 (707)
Q Consensus 533 ~~~~~~~~~~~~gt~~y~aPE~~~~~~---~s~~sDVwSlGvll~elltG~~pf~~~ 586 (707)
. ........++..|+|||++.+.. ++.++||||||+++||+++|+.||...
T Consensus 156 ~---~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~ 209 (264)
T cd06626 156 M---GEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSEL 209 (264)
T ss_pred c---cccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCC
Confidence 0 11012345788999999998766 889999999999999999999999643
No 321
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=5.8e-36 Score=319.96 Aligned_cols=291 Identities=22% Similarity=0.347 Sum_probs=212.4
Q ss_pred hcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCCh--hhHHHHHHHHHHHHccCCCcceeEEEEEEe----CCeE
Q 005227 374 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDE----EGEQ 446 (707)
Q Consensus 374 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~----~~~~ 446 (707)
.++|++.+.||+|+||.||+|... +++.||+|++..... ...+.+.+|+.++++++|+||+++++++.. ....
T Consensus 4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 83 (334)
T cd07855 4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDV 83 (334)
T ss_pred hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceE
Confidence 368999999999999999999964 699999999875322 234577889999999999999999998753 3468
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccC
Q 005227 447 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 526 (707)
Q Consensus 447 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~ 526 (707)
++||||+. ++|.+++... ..+++..++.++.||+.||+|||+.+ |+||||||+||++++++.+||+|||+++..
T Consensus 84 ~lv~e~~~-~~l~~~~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~ 157 (334)
T cd07855 84 YVVMDLME-SDLHHIIHSD--QPLTEEHIRYFLYQLLRGLKYIHSAN---VIHRDLKPSNLLVNEDCELRIGDFGMARGL 157 (334)
T ss_pred EEEEehhh-hhHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCcEEecccccceee
Confidence 99999995 6999988643 34899999999999999999999998 999999999999999999999999999765
Q ss_pred CCCCCCCccccceecccccCCCccchhhhcc-CCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhh
Q 005227 527 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSV 605 (707)
Q Consensus 527 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~ 605 (707)
...... .........|+..|+|||.+.+ ..++.++|||||||++|||++|+.||....... .......
T Consensus 158 ~~~~~~---~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~-~~~~~~~------- 226 (334)
T cd07855 158 SSSPTE---HKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVH-QLKLILS------- 226 (334)
T ss_pred cccCcC---CCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHH-HHHHHHH-------
Confidence 432211 1111223468889999999866 568899999999999999999999996543321 1111000
Q ss_pred ccCCCCCCChHHHHH-HHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCCCC
Q 005227 606 IDGNMGSYPSECVEK-FIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKH 684 (707)
Q Consensus 606 ~~~~~~~~~~~~~~~-l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~H 684 (707)
..+..+.+.... ..+.+..+++..+...+... ....+..+..+.+++.+||..+|++|||+++++.|
T Consensus 227 ---~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~ 294 (334)
T cd07855 227 ---VLGSPSEEVLNRIGSDRVRKYIQNLPRKQPVPW---------SKIFPKASPEALDLLSQMLQFDPEERITVEQALQH 294 (334)
T ss_pred ---HhCCChhHhhhhhchhhHHHHHhhcccCCCCCH---------HHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 011111111111 11122233333332222111 01123345566789999999999999999999999
Q ss_pred CCCCCCCCC
Q 005227 685 PYVSSDVSG 693 (707)
Q Consensus 685 p~f~~~~~~ 693 (707)
|||..-...
T Consensus 295 ~~~~~~~~~ 303 (334)
T cd07855 295 PFLAQYHDP 303 (334)
T ss_pred hhhhhccCC
Confidence 999765554
No 322
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=4.8e-35 Score=302.70 Aligned_cols=251 Identities=20% Similarity=0.361 Sum_probs=201.7
Q ss_pred CCCccceEeeeCceEEEEEEeCC--CcEEEEEEeccCC----------hhhHHHHHHHHHHHHc-cCCCcceeEEEEEEe
Q 005227 376 NFNSSTQIGQGGYGKVYKGILPD--GTVVAVKRAQEGS----------LQGEKEFLTEIQFLSR-LHHRNLVSLVGYCDE 442 (707)
Q Consensus 376 ~~~~~~~lG~G~fg~Vy~~~~~~--~~~vavK~l~~~~----------~~~~~~~~~E~~~l~~-l~h~nIv~l~~~~~~ 442 (707)
+|++.+.||+|+||.||+|..+. ++.+|+|.+.... .....++.+|+.++.+ ++|+||+++++++..
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 47888999999999999999764 7889999875321 1223457788888875 799999999999999
Q ss_pred CCeEEEEEecCCCCCHHHHHhh--cCCCCcCHHHHHHHHHHHHHHHHHHHh-CCCCCeEecCCCCCCEEEcCCCcEEEee
Q 005227 443 EGEQMLVYEFMSNGTLRDQLSA--KSKEPLGFAMRLSIALGSSRGILYLHT-EADPPVFHRDIKASNILLDHKFTAKVAD 519 (707)
Q Consensus 443 ~~~~~lV~E~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~ivH~Dlkp~NILl~~~~~~kl~D 519 (707)
.+..++||||+++++|.+++.. .....+++..++.++.|++.||.|||+ .+ ++|+||+|+||++++++.+||+|
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~---i~H~dl~~~nil~~~~~~~~l~d 157 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKR---IVHRDLTPNNIMLGEDDKVTITD 157 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCc---eeecCCCHHHEEECCCCcEEEec
Confidence 9999999999999999998854 234568999999999999999999996 56 99999999999999999999999
Q ss_pred ecccccCCCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhc
Q 005227 520 FGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQS 599 (707)
Q Consensus 520 FGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~ 599 (707)
||.+....... ......|+..|+|||.+.+..++.++||||||+++|||++|+.||...... .....
T Consensus 158 fg~~~~~~~~~--------~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~-~~~~~---- 224 (269)
T cd08528 158 FGLAKQKQPES--------KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNML-SLATK---- 224 (269)
T ss_pred ccceeeccccc--------ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHH-HHHHH----
Confidence 99997654321 223456788999999999988999999999999999999999999654332 11111
Q ss_pred ccchhhccCCCCCCC-hHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 005227 600 SMMFSVIDGNMGSYP-SECVEKFIKLALKCCQDETDARPSMSEVMRELE 647 (707)
Q Consensus 600 ~~~~~~~~~~~~~~~-~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~ 647 (707)
+......+.+ ..++..+.+++.+||+.+|++||++.++..+++
T Consensus 225 -----~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~ 268 (269)
T cd08528 225 -----IVEAVYEPLPEGMYSEDVTDVITSCLTPDAEARPDIIQVSAMIS 268 (269)
T ss_pred -----HhhccCCcCCcccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence 1111111111 244578899999999999999999999988764
No 323
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=7e-35 Score=300.00 Aligned_cols=202 Identities=25% Similarity=0.423 Sum_probs=172.0
Q ss_pred CCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCC--hhhHHHHHHHHHHHHccCCCcceeEEEEEEe--CCeEEEEE
Q 005227 376 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE--EGEQMLVY 450 (707)
Q Consensus 376 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~--~~~~~lV~ 450 (707)
+|++.+.||.|+||.||++... +++.||+|.+.... ....+.+.+|++++++++|+||+++++++.. ....+++|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM 80 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence 4788899999999999999964 78899999987533 2334678899999999999999999998754 34679999
Q ss_pred ecCCCCCHHHHHhhc--CCCCcCHHHHHHHHHHHHHHHHHHH-----hCCCCCeEecCCCCCCEEEcCCCcEEEeeeccc
Q 005227 451 EFMSNGTLRDQLSAK--SKEPLGFAMRLSIALGSSRGILYLH-----TEADPPVFHRDIKASNILLDHKFTAKVADFGLS 523 (707)
Q Consensus 451 E~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~gL~yLH-----~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla 523 (707)
||+++++|.+++... ...++++..++.++.|++.||+||| +.+ ++|+||||+||++++++.+||+|||++
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~---i~h~dl~p~nili~~~~~~kl~d~g~~ 157 (265)
T cd08217 81 EYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNT---VLHRDLKPANIFLDANNNVKLGDFGLA 157 (265)
T ss_pred hhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCc---ceecCCCHHHEEEecCCCEEEeccccc
Confidence 999999999999753 2456899999999999999999999 666 999999999999999999999999999
Q ss_pred ccCCCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCc
Q 005227 524 RLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 587 (707)
Q Consensus 524 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~~ 587 (707)
....... .......++..|+|||++.+..++.++||||||+++|+|++|+.||....
T Consensus 158 ~~~~~~~-------~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~ 214 (265)
T cd08217 158 KILGHDS-------SFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARN 214 (265)
T ss_pred ccccCCc-------ccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcC
Confidence 8764322 11223468899999999999889999999999999999999999997543
No 324
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=2.9e-35 Score=303.38 Aligned_cols=199 Identities=28% Similarity=0.443 Sum_probs=174.8
Q ss_pred cCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCC-hhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEec
Q 005227 375 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 452 (707)
Q Consensus 375 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~ 452 (707)
++|+..+.||+|+||.||++..+ +++.||+|.+.... ....+++.+|++++++++||||+++++++...+..++|+||
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEY 80 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEe
Confidence 35778899999999999999976 68999999987643 23456789999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHh-CCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCC
Q 005227 453 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHT-EADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 531 (707)
Q Consensus 453 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 531 (707)
+++++|.+++.... ..+++..+..++.|++.||+|||+ .+ ++|+||||+||++++++.++|+|||.+.......
T Consensus 81 ~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~~---i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~- 155 (265)
T cd06605 81 MDGGSLDKILKEVQ-GRIPERILGKIAVAVLKGLTYLHEKHK---IIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSL- 155 (265)
T ss_pred cCCCcHHHHHHHcc-CCCCHHHHHHHHHHHHHHHHHHcCCCC---eecCCCCHHHEEECCCCCEEEeecccchhhHHHH-
Confidence 99999999997643 568999999999999999999999 77 9999999999999999999999999987543211
Q ss_pred CCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCC
Q 005227 532 EGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 586 (707)
Q Consensus 532 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~ 586 (707)
.....++..|+|||.+.+..++.++|||||||++|+|++|+.||...
T Consensus 156 --------~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~ 202 (265)
T cd06605 156 --------AKTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPE 202 (265)
T ss_pred --------hhcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCcc
Confidence 11156788999999999999999999999999999999999999644
No 325
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=7.6e-35 Score=301.26 Aligned_cols=251 Identities=24% Similarity=0.354 Sum_probs=189.3
Q ss_pred eEeeeCceEEEEEEeCCC---cEEEEEEeccCC-hhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEecCCCCC
Q 005227 382 QIGQGGYGKVYKGILPDG---TVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGT 457 (707)
Q Consensus 382 ~lG~G~fg~Vy~~~~~~~---~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gs 457 (707)
.||+|+||+||+|...++ ..+++|.+.... ....+.+.+|+.+++.++||||+++++.|......++||||+++|+
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 81 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELGD 81 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCCc
Confidence 589999999999985433 356677766433 3345689999999999999999999999999999999999999999
Q ss_pred HHHHHhhcC--CCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCCCcc
Q 005227 458 LRDQLSAKS--KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIV 535 (707)
Q Consensus 458 L~~~l~~~~--~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 535 (707)
|.+++++.. ....++..++.++.||++||+|||+.+ ++||||||+|||++.++.+||+|||++......+.
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~---i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~---- 154 (268)
T cd05086 82 LKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHN---FLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDY---- 154 (268)
T ss_pred HHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCC---eeccCCccceEEEcCCccEEecccccccccCcchh----
Confidence 999997642 234677788899999999999999998 99999999999999999999999999864321110
Q ss_pred ccceecccccCCCccchhhhcc-------CCCCCchhhHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHhhcccchhhcc
Q 005227 536 PAHVSTVVKGTPGYLDPEYFLT-------HKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVID 607 (707)
Q Consensus 536 ~~~~~~~~~gt~~y~aPE~~~~-------~~~s~~sDVwSlGvll~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 607 (707)
........++..|+|||++.. ..++.++|||||||++|||++ |..||..... .+........ ......+
T Consensus 155 -~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~-~~~~~~~~~~-~~~~~~~ 231 (268)
T cd05086 155 -IETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSD-REVLNHVIKD-QQVKLFK 231 (268)
T ss_pred -hhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCH-HHHHHHHHhh-cccccCC
Confidence 011123457889999999853 345789999999999999997 5667754433 2222221111 1111111
Q ss_pred CCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 005227 608 GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMREL 646 (707)
Q Consensus 608 ~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L 646 (707)
+..+......+.+++..|| .+|++||++.++++.|
T Consensus 232 ---~~~~~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l 266 (268)
T cd05086 232 ---PQLELPYSERWYEVLQFCW-LSPEKRATAEEVHRLL 266 (268)
T ss_pred ---CccCCCCcHHHHHHHHHHh-hCcccCCCHHHHHHHh
Confidence 1222335567888999999 5799999999998876
No 326
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=3e-35 Score=301.76 Aligned_cols=200 Identities=28% Similarity=0.466 Sum_probs=173.6
Q ss_pred CCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCC--hhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEec
Q 005227 376 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 452 (707)
Q Consensus 376 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~ 452 (707)
+|+..+.||+|+||.||+|..+ +|..||+|.+.... ....+.+.+|+++++.++|+||+++++++......++|+||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~ 80 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEY 80 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEec
Confidence 5788999999999999999975 68899999986532 12345788999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCC-cEEEeeecccccCCCCCC
Q 005227 453 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKF-TAKVADFGLSRLAPVPDI 531 (707)
Q Consensus 453 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~-~~kl~DFGla~~~~~~~~ 531 (707)
+++++|.+++.......+++..+..++.|+++||+|||+.+ ++|+||||+||++++++ .+||+|||.+.......
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~- 156 (257)
T cd08225 81 CDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRK---ILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSM- 156 (257)
T ss_pred CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCCHHHEEEcCCCCeEEecccccchhccCCc-
Confidence 99999999997765556899999999999999999999998 99999999999999885 46999999987654221
Q ss_pred CCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCC
Q 005227 532 EGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISH 585 (707)
Q Consensus 532 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~ 585 (707)
.......|++.|+|||+..+..++.++||||||+++|||++|+.||..
T Consensus 157 ------~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~ 204 (257)
T cd08225 157 ------ELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEG 204 (257)
T ss_pred ------ccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 112234588899999999988899999999999999999999999864
No 327
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=1.3e-35 Score=305.49 Aligned_cols=254 Identities=24% Similarity=0.379 Sum_probs=198.3
Q ss_pred EeeeCceEEEEEEeC-CCcEEEEEEeccCCh---hhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEecCCCCCH
Q 005227 383 IGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTL 458 (707)
Q Consensus 383 lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL 458 (707)
||+|+||.||++... +++.||+|.+..... ...+.+.+|++++++++|+||+++++.+...+..++||||+++++|
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence 689999999999976 599999999876443 3346788999999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCCC-cccc
Q 005227 459 RDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEG-IVPA 537 (707)
Q Consensus 459 ~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~-~~~~ 537 (707)
.+++.... .+++..+..++.|+++||+|||+.+ ++|+||+|+||++++++.++|+|||++.......... ....
T Consensus 81 ~~~l~~~~--~~~~~~~~~i~~qi~~~L~~lH~~~---i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~ 155 (265)
T cd05579 81 ASLLENVG--SLDEDVARIYIAEIVLALEYLHSNG---IIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDE 155 (265)
T ss_pred HHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHcC---eecCCCCHHHeEEcCCCCEEEEecccchhcccCccccccccc
Confidence 99997644 5899999999999999999999998 9999999999999999999999999987643321100 0001
Q ss_pred ceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCCCCCCChHH
Q 005227 538 HVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSEC 617 (707)
Q Consensus 538 ~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 617 (707)
.......++..|+|||......++.++||||||+++||+++|+.||...... ....
T Consensus 156 ~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~-~~~~----------------------- 211 (265)
T cd05579 156 KEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPE-EIFQ----------------------- 211 (265)
T ss_pred ccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHH-HHHH-----------------------
Confidence 1223345788999999999888999999999999999999999999643321 0000
Q ss_pred HHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCC---CcCCCCCCCCC
Q 005227 618 VEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSS---SSMLKHPYVSS 689 (707)
Q Consensus 618 ~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa---~e~L~Hp~f~~ 689 (707)
.+ .. ....+|... .......+|+.+|+..+|++|||+ .++|+||||+.
T Consensus 212 -----~~----~~-~~~~~~~~~--------------~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~~~~~~~ 262 (265)
T cd05579 212 -----NI----LN-GKIEWPEDV--------------EVSDEAIDLISKLLVPDPEKRLGAKSIEEIKNHPFFKG 262 (265)
T ss_pred -----HH----hc-CCcCCCccc--------------cCCHHHHHHHHHHhcCCHhhcCCCccHHHHhcCccccC
Confidence 00 00 000011000 012333478888999999999999 99999999974
No 328
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=8.2e-35 Score=301.39 Aligned_cols=203 Identities=32% Similarity=0.452 Sum_probs=172.9
Q ss_pred HhcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHcc-CCCcceeEEEEEEeCC------
Q 005227 373 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEG------ 444 (707)
Q Consensus 373 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~------ 444 (707)
.+++|++.+.||+|+||+||+|..+ +++.|++|++..... ..+.+.+|+.+++++ +|+||+++++++....
T Consensus 4 ~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~ 82 (275)
T cd06608 4 PTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED-EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDD 82 (275)
T ss_pred chhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch-hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcce
Confidence 4688999999999999999999975 678999999876443 346789999999999 7999999999996644
Q ss_pred eEEEEEecCCCCCHHHHHhhcC--CCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecc
Q 005227 445 EQMLVYEFMSNGTLRDQLSAKS--KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGL 522 (707)
Q Consensus 445 ~~~lV~E~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGl 522 (707)
..++||||+++++|.+++.... ...+++..+..++.|++.||+|||+.+ ++|+||+|+||++++++.+||+|||+
T Consensus 83 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~---i~H~~l~p~ni~~~~~~~~~l~d~~~ 159 (275)
T cd06608 83 QLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENK---VIHRDIKGQNILLTKNAEVKLVDFGV 159 (275)
T ss_pred EEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCC---cccCCCCHHHEEEccCCeEEECCCcc
Confidence 4899999999999999987533 456899999999999999999999998 99999999999999999999999999
Q ss_pred cccCCCCCCCCccccceecccccCCCccchhhhcc-----CCCCCchhhHHHHHHHHHHHcCCCCCCCC
Q 005227 523 SRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-----HKLTDKSDVYSLGVVFLELLTGMQPISHG 586 (707)
Q Consensus 523 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~s~~sDVwSlGvll~elltG~~pf~~~ 586 (707)
+....... .......|+..|+|||++.. ..++.++|||||||++|||++|+.||...
T Consensus 160 ~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~ 221 (275)
T cd06608 160 SAQLDSTL-------GRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDM 221 (275)
T ss_pred ceecccch-------hhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCcccc
Confidence 87643211 11233458889999999854 35678999999999999999999999643
No 329
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=1.1e-34 Score=302.72 Aligned_cols=276 Identities=26% Similarity=0.380 Sum_probs=200.4
Q ss_pred CCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCChh--hHHHHHHHHHHHHcc---CCCcceeEEEEEEeCCe-----
Q 005227 377 FNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ--GEKEFLTEIQFLSRL---HHRNLVSLVGYCDEEGE----- 445 (707)
Q Consensus 377 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~--~~~~~~~E~~~l~~l---~h~nIv~l~~~~~~~~~----- 445 (707)
|++.+.||+|+||.||+|..+ +++.||+|++...... ....+.+|+.+++++ +|+|++++++++...+.
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 567899999999999999976 5899999998743222 234566788777666 59999999999987776
Q ss_pred EEEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeeccccc
Q 005227 446 QMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRL 525 (707)
Q Consensus 446 ~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~ 525 (707)
.+++|||+. ++|.+++.......+++..++.++.|+++||+|||+.+ ++|+||+|+||++++++.+||+|||.+..
T Consensus 81 ~~l~~e~~~-~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~---i~h~~l~~~nili~~~~~~~l~dfg~~~~ 156 (287)
T cd07838 81 LTLVFEHVD-QDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHR---IVHRDLKPQNILVTSDGQVKIADFGLARI 156 (287)
T ss_pred eEEEehhcc-cCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCChhhEEEccCCCEEEeccCccee
Confidence 999999996 58999987655556999999999999999999999998 99999999999999999999999999977
Q ss_pred CCCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhh
Q 005227 526 APVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSV 605 (707)
Q Consensus 526 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~ 605 (707)
..... ......++..|+|||++.+..++.++|||||||++|||++|+.||..... .+...........
T Consensus 157 ~~~~~--------~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~-~~~~~~~~~~~~~--- 224 (287)
T cd07838 157 YSFEM--------ALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSE-ADQLDKIFDVIGL--- 224 (287)
T ss_pred ccCCc--------ccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCCh-HHHHHHHHHHcCC---
Confidence 54321 11223468899999999999999999999999999999999888865433 2222111110000
Q ss_pred ccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCCCCC
Q 005227 606 IDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHP 685 (707)
Q Consensus 606 ~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hp 685 (707)
......+.. ......++...+. +.+.++. +.......+++.+||..||++||+++|+++||
T Consensus 225 --~~~~~~~~~-----~~~~~~~~~~~~~--~~~~~~~----------~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~~ 285 (287)
T cd07838 225 --PSEEEWPRN-----VSLPRSSFPSYTP--RSFKSFV----------PEICEEGLDLLKKMLTFNPHKRISAFEALQHP 285 (287)
T ss_pred --CChHhcCCC-----cccchhhcccccc--cchhhhh----------hhhhHHHHHHHHHHhccCCccCCCHHHHhcCc
Confidence 000000000 0000001110000 1111111 12234445899999999999999999999999
Q ss_pred CC
Q 005227 686 YV 687 (707)
Q Consensus 686 ~f 687 (707)
||
T Consensus 286 ~~ 287 (287)
T cd07838 286 YF 287 (287)
T ss_pred CC
Confidence 98
No 330
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00 E-value=9.9e-36 Score=317.56 Aligned_cols=295 Identities=25% Similarity=0.362 Sum_probs=214.7
Q ss_pred CCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCC--hhhHHHHHHHHHHHHccCCCcceeEEEEEEeCC-----eEE
Q 005227 376 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG-----EQM 447 (707)
Q Consensus 376 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~-----~~~ 447 (707)
+|++.+.||+|+||.||+|... +++.||||++.... ....+.+.+|+++++.++|+||+++++++.... ..+
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY 80 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence 5888999999999999999975 58999999987643 334567899999999999999999999987765 789
Q ss_pred EEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCC
Q 005227 448 LVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAP 527 (707)
Q Consensus 448 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~ 527 (707)
+||||++ ++|.+++.... .+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.++|+|||++....
T Consensus 81 lv~e~~~-~~l~~~l~~~~--~l~~~~~~~i~~~l~~~l~~LH~~g---i~H~dlkp~nili~~~~~~~L~dfg~~~~~~ 154 (330)
T cd07834 81 IVTELME-TDLHKVIKSPQ--PLTDDHIQYFLYQILRGLKYLHSAN---VIHRDLKPSNILVNSNCDLKICDFGLARGVD 154 (330)
T ss_pred EEecchh-hhHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEcccCceEeec
Confidence 9999997 58999886543 6999999999999999999999998 9999999999999999999999999998764
Q ss_pred CCCCCCccccceecccccCCCccchhhhccC-CCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhc
Q 005227 528 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVI 606 (707)
Q Consensus 528 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~ 606 (707)
..... ........++..|+|||++.+. .++.++||||||+++|+|++|+.||...... ........ .
T Consensus 155 ~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~-~~~~~i~~------~- 222 (330)
T cd07834 155 PDEDE----KGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYI-DQLNLIVE------V- 222 (330)
T ss_pred ccccc----cccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHH-HHHHHHHH------h-
Confidence 32210 0112334578899999999887 8999999999999999999999999654432 11111100 0
Q ss_pred cCCCCCCChHHHHH-HHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCCCCC
Q 005227 607 DGNMGSYPSECVEK-FIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHP 685 (707)
Q Consensus 607 ~~~~~~~~~~~~~~-l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hp 685 (707)
.+..+.+.... ....+...+...+..++ . .+....+.......+|+.+||..+|++|||++++++||
T Consensus 223 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--------~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~ 290 (330)
T cd07834 223 ---LGTPSEEDLKFITSEKARNYLKSLPKKPK-K--------PLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHP 290 (330)
T ss_pred ---cCCCChhHhhhccccchhhHHhhcccCCc-c--------hhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCc
Confidence 00111110000 00000000000000000 0 01112233455567899999999999999999999999
Q ss_pred CCCCCCCCCCccccc
Q 005227 686 YVSSDVSGSNLVSGV 700 (707)
Q Consensus 686 ~f~~~~~~~~~~~~~ 700 (707)
||.+-...++-.+.+
T Consensus 291 ~~~~~~~~~~~~~~~ 305 (330)
T cd07834 291 YLAQLHDPEDEPVAK 305 (330)
T ss_pred cHHhhcccccCCCCC
Confidence 998766655444443
No 331
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=1.9e-35 Score=307.86 Aligned_cols=278 Identities=26% Similarity=0.405 Sum_probs=208.5
Q ss_pred CCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCChh--hHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEecC
Q 005227 377 FNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ--GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 453 (707)
Q Consensus 377 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~--~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~ 453 (707)
|+..+.||+|++|.||+|... +++.+++|.+...... ....+.+|++++++++|+||+++++++...+..++||||+
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFM 80 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEecc
Confidence 567889999999999999965 7899999998754332 3467889999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCCC
Q 005227 454 SNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEG 533 (707)
Q Consensus 454 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 533 (707)
++ +|.+++.... ..+++..+..++.|++.||.|||+.+ |+|+||||+||++++++.+||+|||.+.......
T Consensus 81 ~~-~l~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~--- 152 (283)
T cd05118 81 DT-DLYKLIKDRQ-RGLPESLIKSYLYQLLQGLAFCHSHG---ILHRDLKPENLLINTEGVLKLADFGLARSFGSPV--- 152 (283)
T ss_pred CC-CHHHHHHhhc-ccCCHHHHHHHHHHHHHHHHHHHHCC---eeecCcCHHHEEECCCCcEEEeeeeeeEecCCCc---
Confidence 65 8888886643 46899999999999999999999998 9999999999999999999999999997664322
Q ss_pred ccccceecccccCCCccchhhhccC-CCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCCCCC
Q 005227 534 IVPAHVSTVVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGS 612 (707)
Q Consensus 534 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 612 (707)
.......++..|+|||.+.+. .++.++||||||+++|+|++|+.||....... ........ ...
T Consensus 153 ----~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~-~~~~~~~~----------~~~ 217 (283)
T cd05118 153 ----RPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEID-QLFKIFRT----------LGT 217 (283)
T ss_pred ----ccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHH----------cCC
Confidence 111224577889999999876 78999999999999999999999996554422 21111100 001
Q ss_pred CChHHHHHHHHHHHHhcccCCCCC-CCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCCCCCCC
Q 005227 613 YPSECVEKFIKLALKCCQDETDAR-PSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYV 687 (707)
Q Consensus 613 ~~~~~~~~l~~l~~~c~~~~p~~R-Pt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f 687 (707)
...+....+.+.+..+....+... ....++. +..+....+|+.+|+..||.+||++++++.||||
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~~~~ 283 (283)
T cd05118 218 PDPEVWPKFTSLARNYKFSFPKKAGMPLPKLF----------PNASPQALDLLSQMLHYDPHKRITAEQALAHPYF 283 (283)
T ss_pred CchHhcccchhhhhhhhhhhccccccCHHHhh----------hhhCHHHHHHHHHHhccCcccCcCHHHHhhCCCC
Confidence 111111112221222111112111 1221111 2234556689999999999999999999999997
No 332
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=100.00 E-value=2.8e-35 Score=314.86 Aligned_cols=291 Identities=24% Similarity=0.324 Sum_probs=207.1
Q ss_pred cCCCc-cceEeeeCceEEEEEEeC-CCcEEEEEEeccCChhh--------------HHHHHHHHHHHHccCCCcceeEEE
Q 005227 375 NNFNS-STQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQG--------------EKEFLTEIQFLSRLHHRNLVSLVG 438 (707)
Q Consensus 375 ~~~~~-~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~--------------~~~~~~E~~~l~~l~h~nIv~l~~ 438 (707)
++|.. .+.||+|+||+||+|... +++.||||.+....... ...+.+|+++++.++|+||+++++
T Consensus 8 ~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~ 87 (335)
T PTZ00024 8 ERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVD 87 (335)
T ss_pred cchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeE
Confidence 45654 467999999999999965 78999999886532221 125778999999999999999999
Q ss_pred EEEeCCeEEEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEe
Q 005227 439 YCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVA 518 (707)
Q Consensus 439 ~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~ 518 (707)
++...+..++||||++ |+|.+++... ..+++.....++.|++.||+|||+.+ |+|+||+|+||+++.++.+||+
T Consensus 88 ~~~~~~~~~lv~e~~~-~~l~~~l~~~--~~~~~~~~~~~~~ql~~aL~~LH~~~---i~H~dl~~~nill~~~~~~kl~ 161 (335)
T PTZ00024 88 VYVEGDFINLVMDIMA-SDLKKVVDRK--IRLTESQVKCILLQILNGLNVLHKWY---FMHRDLSPANIFINSKGICKIA 161 (335)
T ss_pred EEecCCcEEEEEeccc-cCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCC---eecccccHHHeEECCCCCEEEC
Confidence 9999999999999996 6999998653 34889999999999999999999998 9999999999999999999999
Q ss_pred eecccccCCCCCCCCc-------cccceecccccCCCccchhhhccC-CCCCchhhHHHHHHHHHHHcCCCCCCCCchhH
Q 005227 519 DFGLSRLAPVPDIEGI-------VPAHVSTVVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVFLELLTGMQPISHGKNIV 590 (707)
Q Consensus 519 DFGla~~~~~~~~~~~-------~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~sDVwSlGvll~elltG~~pf~~~~~~~ 590 (707)
|||+++.......... ..........++..|+|||++.+. .++.++|||||||++|||++|+.||....+..
T Consensus 162 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~ 241 (335)
T PTZ00024 162 DFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEID 241 (335)
T ss_pred CccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 9999976542111000 001112233467889999998764 47899999999999999999999997554321
Q ss_pred HHHHHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCC
Q 005227 591 REVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTS 670 (707)
Q Consensus 591 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~ 670 (707)
. ...... .... .+.........+...+ ...+...+.. ....+.....+.+++.+||..
T Consensus 242 ~-~~~i~~------~~~~----~~~~~~~~~~~~~~~~-~~~~~~~~~~----------~~~~~~~~~~~~~li~~~l~~ 299 (335)
T PTZ00024 242 Q-LGRIFE------LLGT----PNEDNWPQAKKLPLYT-EFTPRKPKDL----------KTIFPNASDDAIDLLQSLLKL 299 (335)
T ss_pred H-HHHHHH------HhCC----CchhhCcchhhccccc-ccCcCCcccH----------HHhCcCCChHHHHHHHHHcCC
Confidence 1 111100 0000 0000000000000000 0001011111 111233445667899999999
Q ss_pred CCCCCCCCCcCCCCCCCCCCCCC
Q 005227 671 KEETPPSSSSMLKHPYVSSDVSG 693 (707)
Q Consensus 671 dP~~R~sa~e~L~Hp~f~~~~~~ 693 (707)
+|++|+|++|+|.||||.+....
T Consensus 300 ~P~~R~s~~~~l~~~~~~~~~~~ 322 (335)
T PTZ00024 300 NPLERISAKEALKHEYFKSDPLP 322 (335)
T ss_pred CchhccCHHHHhcCcccCCCCCC
Confidence 99999999999999999988664
No 333
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=1.6e-34 Score=300.41 Aligned_cols=246 Identities=26% Similarity=0.420 Sum_probs=194.4
Q ss_pred CCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCCh-hhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEecC
Q 005227 376 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 453 (707)
Q Consensus 376 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~ 453 (707)
-|+..+.||+|+||.||+|... +++.||+|....... ...+.+.+|+.++++++|+||+++++++...+..++||||+
T Consensus 5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06641 5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYL 84 (277)
T ss_pred hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeC
Confidence 3667889999999999999864 789999998865332 33467889999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCCC
Q 005227 454 SNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEG 533 (707)
Q Consensus 454 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 533 (707)
++++|.+++.. ..+++..+..++.|++.|+.|||+.+ ++|+||+|+||+++.++.++|+|||++.......
T Consensus 85 ~~~~l~~~i~~---~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~--- 155 (277)
T cd06641 85 GGGSALDLLEP---GPLDETQIATILREILKGLDYLHSEK---KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ--- 155 (277)
T ss_pred CCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHccCC---eecCCCCHHhEEECCCCCEEEeecccceecccch---
Confidence 99999999854 35889999999999999999999998 9999999999999999999999999987654321
Q ss_pred ccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCCCCCC
Q 005227 534 IVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSY 613 (707)
Q Consensus 534 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 613 (707)
.......++..|+|||.+.+..++.++|||||||++|||++|..||..... ...... +........
T Consensus 156 ----~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~-~~~~~~---------~~~~~~~~~ 221 (277)
T cd06641 156 ----IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHP-MKVLFL---------IPKNNPPTL 221 (277)
T ss_pred ----hhhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccch-HHHHHH---------HhcCCCCCC
Confidence 112234578899999999988899999999999999999999999864322 111111 011111223
Q ss_pred ChHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005227 614 PSECVEKFIKLALKCCQDETDARPSMSEVMR 644 (707)
Q Consensus 614 ~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~ 644 (707)
+..++..+.+++.+|++.+|.+||++.++++
T Consensus 222 ~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~ 252 (277)
T cd06641 222 EGNYSKPLKEFVEACLNKEPSFRPTAKELLK 252 (277)
T ss_pred CcccCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 3344555666677777777766776666665
No 334
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=1.1e-34 Score=298.78 Aligned_cols=201 Identities=30% Similarity=0.436 Sum_probs=177.2
Q ss_pred cCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCCh-hhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEec
Q 005227 375 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 452 (707)
Q Consensus 375 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~ 452 (707)
++|++.+.||+|++|.||+|... +++.||||++..... ...+.+.+|++.+++++|+||+++++++...+..++||||
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEY 80 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEe
Confidence 36888999999999999999976 599999999876544 3457899999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHh-CCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCC
Q 005227 453 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHT-EADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 531 (707)
Q Consensus 453 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 531 (707)
+++++|.+++... ..+++..++.++.|+++||+|||+ .+ ++|+||+|+||+++.++.++|+|||.+.......
T Consensus 81 ~~~~~L~~~l~~~--~~l~~~~~~~~~~~l~~~l~~lh~~~~---~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~- 154 (264)
T cd06623 81 MDGGSLADLLKKV--GKIPEPVLAYIARQILKGLDYLHTKRH---IIHRDIKPSNLLINSKGEVKIADFGISKVLENTL- 154 (264)
T ss_pred cCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHhccCC---CccCCCCHHHEEECCCCCEEEccCccceecccCC-
Confidence 9999999999754 468999999999999999999999 88 9999999999999999999999999998654322
Q ss_pred CCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCc
Q 005227 532 EGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 587 (707)
Q Consensus 532 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~~ 587 (707)
.......++..|+|||.+.+..++.++||||||+++|||++|+.||....
T Consensus 155 ------~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~ 204 (264)
T cd06623 155 ------DQCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPG 204 (264)
T ss_pred ------CcccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccc
Confidence 11123457889999999999999999999999999999999999996543
No 335
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=3.5e-35 Score=307.73 Aligned_cols=253 Identities=23% Similarity=0.384 Sum_probs=199.1
Q ss_pred cceEeeeCceEEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEecCCCCCH
Q 005227 380 STQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTL 458 (707)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL 458 (707)
..+||+|+||.||+|..+ +++.||||.+..........+.+|+.+++.++|+||+++++++...+..++||||+++++|
T Consensus 25 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L 104 (292)
T cd06657 25 FIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL 104 (292)
T ss_pred HHHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcH
Confidence 467999999999999974 7899999998665545566789999999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCCCccccc
Q 005227 459 RDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAH 538 (707)
Q Consensus 459 ~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~ 538 (707)
.+++.. ..+++..+..++.|++.||+|||+.+ ++|+||+|+||++++++.++|+|||++....... .
T Consensus 105 ~~~~~~---~~~~~~~~~~~~~ql~~~l~~lH~~g---ivH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~-------~ 171 (292)
T cd06657 105 TDIVTH---TRMNEEQIAAVCLAVLKALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV-------P 171 (292)
T ss_pred HHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEEcccccceeccccc-------c
Confidence 998743 24789999999999999999999998 9999999999999999999999999987543211 1
Q ss_pred eecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCCCCCCChHHH
Q 005227 539 VSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECV 618 (707)
Q Consensus 539 ~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 618 (707)
......|+..|+|||.+.+..++.++||||||+++|||++|..||...... ...
T Consensus 172 ~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~-~~~------------------------- 225 (292)
T cd06657 172 RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL-KAM------------------------- 225 (292)
T ss_pred cccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHH-------------------------
Confidence 122345788999999998888999999999999999999999998643221 100
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCCCCCCCCCCCC
Q 005227 619 EKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSSDVS 692 (707)
Q Consensus 619 ~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f~~~~~ 692 (707)
..+..++.... ......+....+++.+||+.+|.+|+++.++|+||||.....
T Consensus 226 ----~~~~~~~~~~~-----------------~~~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~~~~~~~~~~ 278 (292)
T cd06657 226 ----KMIRDNLPPKL-----------------KNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGP 278 (292)
T ss_pred ----HHHHhhCCccc-----------------CCcccCCHHHHHHHHHHHhCCcccCcCHHHHhcChHHhccCC
Confidence 00111110000 000111222336778888888999999999999999876654
No 336
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=1.5e-34 Score=299.55 Aligned_cols=201 Identities=27% Similarity=0.455 Sum_probs=170.2
Q ss_pred CCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCChh----------hHHHHHHHHHHHHccCCCcceeEEEEEEeCC
Q 005227 376 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ----------GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG 444 (707)
Q Consensus 376 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~----------~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~ 444 (707)
+|...+.||+|+||.||+|... +++.||+|.+...... ..+.+.+|+++++.++|+|++++++++...+
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 81 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE 81 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence 4677899999999999999854 7899999987532111 1245788999999999999999999999999
Q ss_pred eEEEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccc
Q 005227 445 EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSR 524 (707)
Q Consensus 445 ~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~ 524 (707)
..++||||+++++|.+++.+. ..+++..+..++.|++.||.|||+.+ ++|+||+|+||++++++.++++|||+++
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~~~nil~~~~~~~~l~d~~~~~ 156 (272)
T cd06629 82 YLSIFLEYVPGGSIGSCLRTY--GRFEEQLVRFFTEQVLEGLAYLHSKG---ILHRDLKADNLLVDADGICKISDFGISK 156 (272)
T ss_pred ceEEEEecCCCCcHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHhhCC---eeecCCChhhEEEcCCCeEEEeeccccc
Confidence 999999999999999999765 35899999999999999999999988 9999999999999999999999999997
Q ss_pred cCCCCCCCCccccceecccccCCCccchhhhccCC--CCCchhhHHHHHHHHHHHcCCCCCCCC
Q 005227 525 LAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHK--LTDKSDVYSLGVVFLELLTGMQPISHG 586 (707)
Q Consensus 525 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~s~~sDVwSlGvll~elltG~~pf~~~ 586 (707)
...... .........|+..|+|||.+.... ++.++||||||+++||+++|..||...
T Consensus 157 ~~~~~~-----~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~ 215 (272)
T cd06629 157 KSDDIY-----DNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDE 215 (272)
T ss_pred cccccc-----cccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCc
Confidence 643211 011123345788999999988754 889999999999999999999999643
No 337
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=1.3e-34 Score=300.78 Aligned_cols=198 Identities=29% Similarity=0.470 Sum_probs=171.1
Q ss_pred CCCccceEeeeCceEEEEEEe-CCCcEEEEEEeccCC-hhhHHHHHHHHHHHHccC---CCcceeEEEEEEeCCeEEEEE
Q 005227 376 NFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLH---HRNLVSLVGYCDEEGEQMLVY 450 (707)
Q Consensus 376 ~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~---h~nIv~l~~~~~~~~~~~lV~ 450 (707)
.|+..+.||+|+||.||+|.. .+++.||+|.+.... ....+++.+|+.++++++ |+|++++++++......++||
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~ 81 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIM 81 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEE
Confidence 477789999999999999996 478999999986542 233467889999999996 999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCC
Q 005227 451 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 530 (707)
Q Consensus 451 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~ 530 (707)
||+++++|.+++... .+++..++.++.|++.||.|||+.+ |+|+||+|+||++++++.++|+|||++.......
T Consensus 82 e~~~~~~L~~~~~~~---~l~~~~~~~i~~~i~~~l~~lh~~~---i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~ 155 (277)
T cd06917 82 EYAEGGSVRTLMKAG---PIAEKYISVIIREVLVALKYIHKVG---VIHRDIKAANILVTNTGNVKLCDFGVAALLNQNS 155 (277)
T ss_pred ecCCCCcHHHHHHcc---CCCHHHHHHHHHHHHHHHHHHHhCC---cccCCcCHHHEEEcCCCCEEEccCCceeecCCCc
Confidence 999999999998543 5899999999999999999999998 9999999999999999999999999998664322
Q ss_pred CCCccccceecccccCCCccchhhhcc-CCCCCchhhHHHHHHHHHHHcCCCCCCCC
Q 005227 531 IEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHG 586 (707)
Q Consensus 531 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDVwSlGvll~elltG~~pf~~~ 586 (707)
.......|+..|+|||.+.+ ..++.++|||||||++|+|++|+.||...
T Consensus 156 -------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~ 205 (277)
T cd06917 156 -------SKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDV 205 (277)
T ss_pred -------cccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCC
Confidence 11223458889999999875 45789999999999999999999999643
No 338
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=1.2e-34 Score=303.78 Aligned_cols=199 Identities=26% Similarity=0.433 Sum_probs=175.0
Q ss_pred cCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEecC
Q 005227 375 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 453 (707)
Q Consensus 375 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~ 453 (707)
++|.+.+.||+|+||.||+|... +++.||+|.+........+.+.+|+.+++.++||||+++++++...+..++|+||+
T Consensus 19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~ 98 (293)
T cd06647 19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEYL 98 (293)
T ss_pred hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEecC
Confidence 68889999999999999999854 78899999987554445567899999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCCC
Q 005227 454 SNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEG 533 (707)
Q Consensus 454 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 533 (707)
++++|.+++.+. .+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.+||+|||++.......
T Consensus 99 ~~~~L~~~~~~~---~l~~~~~~~i~~~l~~al~~LH~~g---i~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~--- 169 (293)
T cd06647 99 AGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ--- 169 (293)
T ss_pred CCCcHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhCC---EeeccCCHHHEEEcCCCCEEEccCcceecccccc---
Confidence 999999998643 4789999999999999999999998 9999999999999999999999999987554322
Q ss_pred ccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCC
Q 005227 534 IVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 586 (707)
Q Consensus 534 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~ 586 (707)
.......|++.|+|||.+....++.++|||||||++||+++|+.||...
T Consensus 170 ----~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~ 218 (293)
T cd06647 170 ----SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNE 218 (293)
T ss_pred ----cccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 1122345788999999998888999999999999999999999999654
No 339
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=2.5e-35 Score=315.36 Aligned_cols=283 Identities=25% Similarity=0.373 Sum_probs=207.3
Q ss_pred hcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccC--ChhhHHHHHHHHHHHHccCCCcceeEEEEEEeC-----Ce
Q 005227 374 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEG--SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE-----GE 445 (707)
Q Consensus 374 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~-----~~ 445 (707)
.++|.+.+.||+|+||+||+|... +++.||||.+... .....+.+.+|+.+++.++|+||+++++++... ..
T Consensus 4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 83 (337)
T cd07858 4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFND 83 (337)
T ss_pred ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCc
Confidence 357899999999999999999964 7899999988653 222345678899999999999999999988544 35
Q ss_pred EEEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeeccccc
Q 005227 446 QMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRL 525 (707)
Q Consensus 446 ~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~ 525 (707)
.++||||+. ++|.+++... ..+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+++.
T Consensus 84 ~~lv~e~~~-~~L~~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~---i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~ 157 (337)
T cd07858 84 VYIVYELMD-TDLHQIIRSS--QTLSDDHCQYFLYQLLRGLKYIHSAN---VLHRDLKPSNLLLNANCDLKICDFGLART 157 (337)
T ss_pred EEEEEeCCC-CCHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCCEEECcCccccc
Confidence 799999995 7899988653 45899999999999999999999998 99999999999999999999999999986
Q ss_pred CCCCCCCCccccceecccccCCCccchhhhcc-CCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchh
Q 005227 526 APVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFS 604 (707)
Q Consensus 526 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~ 604 (707)
..... .......++..|+|||.+.. ..++.++|||||||++|||++|+.||..... ........ .
T Consensus 158 ~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~-~~~~~~~~------~ 223 (337)
T cd07858 158 TSEKG-------DFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDY-VHQLKLIT------E 223 (337)
T ss_pred cCCCc-------ccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCCh-HHHHHHHH------H
Confidence 54321 11223457889999998875 5689999999999999999999999964432 11111110 0
Q ss_pred hccCCCCCCChHHH-----HHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCC
Q 005227 605 VIDGNMGSYPSECV-----EKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSS 679 (707)
Q Consensus 605 ~~~~~~~~~~~~~~-----~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~ 679 (707)
... ..+.+.. ....+.+. +.....++... ...+.......+++.+||+.+|++|||++
T Consensus 224 ~~~----~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~----------~~~~~~~~~~~~li~~~l~~~P~~Rps~~ 286 (337)
T cd07858 224 LLG----SPSEEDLGFIRNEKARRYIR---SLPYTPRQSFA----------RLFPHANPLAIDLLEKMLVFDPSKRITVE 286 (337)
T ss_pred HhC----CCChHHhhhcCchhhhHHHH---hcCcccccCHH----------HHcccCCHHHHHHHHHHhcCChhhccCHH
Confidence 000 0000000 00000000 00011111111 11234455667899999999999999999
Q ss_pred cCCCCCCCCCCCCC
Q 005227 680 SMLKHPYVSSDVSG 693 (707)
Q Consensus 680 e~L~Hp~f~~~~~~ 693 (707)
|+|+||||......
T Consensus 287 ell~h~~~~~~~~~ 300 (337)
T cd07858 287 EALAHPYLASLHDP 300 (337)
T ss_pred HHHcCcchhhhcCc
Confidence 99999999765443
No 340
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00 E-value=4.2e-35 Score=304.94 Aligned_cols=251 Identities=22% Similarity=0.307 Sum_probs=190.0
Q ss_pred eEeeeCceEEEEEEeC-CCcEEEEEEeccCChh---hHHHHHHHHH---HHHccCCCcceeEEEEEEeCCeEEEEEecCC
Q 005227 382 QIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ---GEKEFLTEIQ---FLSRLHHRNLVSLVGYCDEEGEQMLVYEFMS 454 (707)
Q Consensus 382 ~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~---~~~~~~~E~~---~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~ 454 (707)
.||+|+||.||+|... +++.||+|.+...... ....+..|.. .++...||+|+++++++...+..++||||++
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 4899999999999964 6899999988653322 1223444443 4444579999999999999999999999999
Q ss_pred CCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCCCc
Q 005227 455 NGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGI 534 (707)
Q Consensus 455 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 534 (707)
+++|.+++... ..+++..++.++.|+++||+|||+.+ |+||||||+||++++++.+||+|||++......
T Consensus 81 g~~L~~~l~~~--~~l~~~~~~~~~~ql~~~l~~lH~~~---i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~----- 150 (278)
T cd05606 81 GGDLHYHLSQH--GVFSEAEMRFYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKK----- 150 (278)
T ss_pred CCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---EEcCCCCHHHEEECCCCCEEEccCcCccccCcc-----
Confidence 99999988653 35899999999999999999999998 999999999999999999999999998754321
Q ss_pred cccceecccccCCCccchhhhccC-CCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCCCCCC
Q 005227 535 VPAHVSTVVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSY 613 (707)
Q Consensus 535 ~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 613 (707)
......|+..|+|||++.++ .++.++||||+||++|||++|+.||........
T Consensus 151 ----~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~---------------------- 204 (278)
T cd05606 151 ----KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK---------------------- 204 (278)
T ss_pred ----CCcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccch----------------------
Confidence 11234689999999999754 689999999999999999999999964321000
Q ss_pred ChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCC-----CCCcCCCCCCCC
Q 005227 614 PSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPP-----SSSSMLKHPYVS 688 (707)
Q Consensus 614 ~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~-----sa~e~L~Hp~f~ 688 (707)
....+... . .++.. ....+....+++.+||..+|++|+ +++++++||||.
T Consensus 205 -----~~~~~~~~---~----~~~~~-------------~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~~~~~ 259 (278)
T cd05606 205 -----HEIDRMTL---T----MAVEL-------------PDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEHPFFR 259 (278)
T ss_pred -----HHHHHHhh---c----cCCCC-------------CCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhCcccc
Confidence 00000000 0 00000 011123445677888888888888 899999999998
Q ss_pred CCCCC
Q 005227 689 SDVSG 693 (707)
Q Consensus 689 ~~~~~ 693 (707)
...+.
T Consensus 260 ~~~~~ 264 (278)
T cd05606 260 SLDWQ 264 (278)
T ss_pred CCCch
Confidence 76653
No 341
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=100.00 E-value=2.1e-35 Score=306.81 Aligned_cols=258 Identities=22% Similarity=0.338 Sum_probs=204.1
Q ss_pred cCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCC---hhhHHHHHHHHHHHHccC-CCcceeEEEEEEeCCeEEEE
Q 005227 375 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLH-HRNLVSLVGYCDEEGEQMLV 449 (707)
Q Consensus 375 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~~lV 449 (707)
++|...+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++++++ |+||+++++++...+..++|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 80 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV 80 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence 46888999999999999999975 79999999986532 223467889999999998 99999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCC
Q 005227 450 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 529 (707)
Q Consensus 450 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~ 529 (707)
|||+++++|.+++.... .+++..++.++.|++.||.|||+.+ ++|+||+|+||+++.++.++++|||++......
T Consensus 81 ~e~~~~~~L~~~l~~~~--~l~~~~~~~i~~ql~~~l~~Lh~~~---~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~ 155 (280)
T cd05581 81 LEYAPNGELLQYIRKYG--SLDEKCTRFYAAEILLALEYLHSKG---IIHRDLKPENILLDKDMHIKITDFGTAKVLDPN 155 (280)
T ss_pred EcCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHeEECCCCCEEecCCccccccCCc
Confidence 99999999999997643 5999999999999999999999998 999999999999999999999999999866433
Q ss_pred CCCCcc-------------ccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHH
Q 005227 530 DIEGIV-------------PAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIA 596 (707)
Q Consensus 530 ~~~~~~-------------~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~ 596 (707)
...... .........++..|+|||...+..++.++||||||++++++++|+.||........
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~----- 230 (280)
T cd05581 156 SSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLT----- 230 (280)
T ss_pred cccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHHHH-----
Confidence 211000 01122334578899999999988899999999999999999999999964332100
Q ss_pred hhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCC
Q 005227 597 YQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPP 676 (707)
Q Consensus 597 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~ 676 (707)
+..+....+. .....+....+|+.+||+.+|++||
T Consensus 231 ------------------------~~~~~~~~~~---------------------~~~~~~~~~~~li~~~l~~~p~~R~ 265 (280)
T cd05581 231 ------------------------FQKILKLEYS---------------------FPPNFPPDAKDLIEKLLVLDPQDRL 265 (280)
T ss_pred ------------------------HHHHHhcCCC---------------------CCCccCHHHHHHHHHHhcCCHhhCC
Confidence 0000000000 0011123345788889999999999
Q ss_pred CC----CcCCCCCCC
Q 005227 677 SS----SSMLKHPYV 687 (707)
Q Consensus 677 sa----~e~L~Hp~f 687 (707)
|+ +++|+||||
T Consensus 266 ~~~~~~~~ll~~~~~ 280 (280)
T cd05581 266 GVNEGYDELKAHPFF 280 (280)
T ss_pred CcccCHHHHhcCCCC
Confidence 99 999999998
No 342
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=100.00 E-value=6e-35 Score=313.16 Aligned_cols=281 Identities=22% Similarity=0.354 Sum_probs=206.6
Q ss_pred HhcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCC--hhhHHHHHHHHHHHHccCCCcceeEEEEEEeCC-----
Q 005227 373 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG----- 444 (707)
Q Consensus 373 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~----- 444 (707)
..++|++.+.||+|+||.||+|... +++.||||++.... ....+.+.+|++++++++|+||+++++++....
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07880 13 VPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRF 92 (343)
T ss_pred cccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCcccccc
Confidence 4678999999999999999999954 78999999986432 223456889999999999999999999986543
Q ss_pred -eEEEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeeccc
Q 005227 445 -EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLS 523 (707)
Q Consensus 445 -~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla 523 (707)
..++||||+ +++|.+++.. ..+++..++.++.|+++||+|||+.+ |+||||||+||++++++.+||+|||++
T Consensus 93 ~~~~lv~e~~-~~~l~~~~~~---~~l~~~~~~~i~~qi~~al~~LH~~g---i~H~dlkp~Nill~~~~~~kl~dfg~~ 165 (343)
T cd07880 93 HDFYLVMPFM-GTDLGKLMKH---EKLSEDRIQFLVYQMLKGLKYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLA 165 (343)
T ss_pred ceEEEEEecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEeecccc
Confidence 468999999 7799888853 35899999999999999999999998 999999999999999999999999999
Q ss_pred ccCCCCCCCCccccceecccccCCCccchhhhcc-CCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccc
Q 005227 524 RLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMM 602 (707)
Q Consensus 524 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~ 602 (707)
...... .....++..|+|||.+.+ ..++.++|||||||++|++++|+.||........ .......
T Consensus 166 ~~~~~~----------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~-~~~~~~~--- 231 (343)
T cd07880 166 RQTDSE----------MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQ-LMEIMKV--- 231 (343)
T ss_pred cccccC----------ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHh---
Confidence 754321 123356889999999876 4688999999999999999999999975443211 1111000
Q ss_pred hhhccCCCCCCChHHHHHHHHH-HHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcC
Q 005227 603 FSVIDGNMGSYPSECVEKFIKL-ALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSM 681 (707)
Q Consensus 603 ~~~~~~~~~~~~~~~~~~l~~l-~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~ 681 (707)
....+.+....+..- ...-...-|..++. + +....+.......++|.+||..||++|+|+.++
T Consensus 232 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-------~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~ 295 (343)
T cd07880 232 -------TGTPSKEFVQKLQSEDAKNYVKKLPRFRKK--D-------FRSLLPNANPLAVNVLEKMLVLDAESRITAAEA 295 (343)
T ss_pred -------cCCCCHHHHHhhcchhHHHHHHhccccCcc--h-------HHHhccCCChHHHHHHHHHcCCChhhCCCHHHH
Confidence 001122221111100 00000001111111 0 111123445556789999999999999999999
Q ss_pred CCCCCCCCC
Q 005227 682 LKHPYVSSD 690 (707)
Q Consensus 682 L~Hp~f~~~ 690 (707)
++||||.+.
T Consensus 296 l~~~~~~~~ 304 (343)
T cd07880 296 LAHPYFEEF 304 (343)
T ss_pred hcCccHhhh
Confidence 999999764
No 343
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.7e-35 Score=306.90 Aligned_cols=204 Identities=26% Similarity=0.363 Sum_probs=173.0
Q ss_pred hcCCCccceEeeeCceEEEEEEeCCCcEEEEEEeccC--ChhhHHHHHHHHHHHHcc-CCCcceeEEEEEEeCCeEEEEE
Q 005227 374 TNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEG--SLQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQMLVY 450 (707)
Q Consensus 374 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~--~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lV~ 450 (707)
...|++.++||+||.+.||++...+.+.||+|++... ......-|..|+..|.++ .|.+|+++++|-..++.+||||
T Consensus 360 g~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvm 439 (677)
T KOG0596|consen 360 GREYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVM 439 (677)
T ss_pred cchhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEe
Confidence 3468889999999999999999888899999987643 233356799999999999 5999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCC
Q 005227 451 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 530 (707)
Q Consensus 451 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~ 530 (707)
||= ..+|..+|+........| .++.+..|++.++.++|+++ |||.||||.|+|+-+ |.+||+|||+|.....+.
T Consensus 440 E~G-d~DL~kiL~k~~~~~~~~-~lk~ywkqML~aV~~IH~~g---IVHSDLKPANFLlVk-G~LKLIDFGIA~aI~~DT 513 (677)
T KOG0596|consen 440 ECG-DIDLNKILKKKKSIDPDW-FLKFYWKQMLLAVKTIHQHG---IVHSDLKPANFLLVK-GRLKLIDFGIANAIQPDT 513 (677)
T ss_pred ecc-cccHHHHHHhccCCCchH-HHHHHHHHHHHHHHHHHHhc---eeecCCCcccEEEEe-eeEEeeeechhcccCccc
Confidence 986 569999998877666666 78899999999999999999 999999999999875 689999999998765432
Q ss_pred CCCccccceecccccCCCccchhhhccC-----------CCCCchhhHHHHHHHHHHHcCCCCCCCCch
Q 005227 531 IEGIVPAHVSTVVKGTPGYLDPEYFLTH-----------KLTDKSDVYSLGVVFLELLTGMQPISHGKN 588 (707)
Q Consensus 531 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~s~~sDVwSlGvll~elltG~~pf~~~~~ 588 (707)
..-.....+||+.||+||.+... +.+.++||||+|||||+|+.|+.||..-.+
T Consensus 514 -----TsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n 577 (677)
T KOG0596|consen 514 -----TSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIIN 577 (677)
T ss_pred -----cceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHH
Confidence 12234567899999999999643 256789999999999999999999975443
No 344
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=100.00 E-value=1.2e-35 Score=309.21 Aligned_cols=277 Identities=28% Similarity=0.427 Sum_probs=205.7
Q ss_pred CCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCC--hhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEecC
Q 005227 377 FNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 453 (707)
Q Consensus 377 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~ 453 (707)
|+..+.||+|+||.||+|+.. +++.||+|.+.... ....+.+..|+++++.++|+|++++++++...+..++||||+
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYC 80 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCc
Confidence 566788999999999999965 58999999987643 223467888999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCCC
Q 005227 454 SNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEG 533 (707)
Q Consensus 454 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 533 (707)
+ ++|.+++.... ..+++..++.++.|++.||+|||+.+ |+||||+|+||++++++.+||+|||.++......
T Consensus 81 ~-~~l~~~i~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~--- 152 (282)
T cd07829 81 D-MDLKKYLDKRP-GPLSPNLIKSIMYQLLRGLAYCHSHR---ILHRDLKPQNILINRDGVLKLADFGLARAFGIPL--- 152 (282)
T ss_pred C-cCHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChheEEEcCCCCEEEecCCcccccCCCc---
Confidence 7 59999997653 45999999999999999999999998 9999999999999999999999999997654321
Q ss_pred ccccceecccccCCCccchhhhccC-CCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCCCCC
Q 005227 534 IVPAHVSTVVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGS 612 (707)
Q Consensus 534 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 612 (707)
.......++..|+|||.+.+. .++.++|||||||++|||++|+.||...... ......... ...
T Consensus 153 ----~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~-~~~~~~~~~----------~~~ 217 (282)
T cd07829 153 ----RTYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEI-DQLFKIFQI----------LGT 217 (282)
T ss_pred ----cccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHH-HHHHHHHHH----------hCC
Confidence 112223456789999999876 8899999999999999999999888654432 111111000 000
Q ss_pred CChHHHHHHHHHH-HHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCCCCCCC
Q 005227 613 YPSECVEKFIKLA-LKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYV 687 (707)
Q Consensus 613 ~~~~~~~~l~~l~-~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f 687 (707)
..+.....+.++. ..+.......++ ....++..+....+++.+||..||++||++++++.||||
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~p~~ 282 (282)
T cd07829 218 PTEESWPGVTKLPDYKPTFPKFPPKD-----------LEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKHPYF 282 (282)
T ss_pred CcHHHHHhhcccccccccccccCccc-----------hHHhcccccHHHHHHHHHhhccCcccCCCHHHHhhCcCC
Confidence 1111111111110 000000000000 011223335567789999999999999999999999998
No 345
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=4.2e-34 Score=301.85 Aligned_cols=244 Identities=30% Similarity=0.468 Sum_probs=188.2
Q ss_pred cCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCCh---hhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEE
Q 005227 375 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 450 (707)
Q Consensus 375 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~ 450 (707)
+.|+..+.||+|+||+||+|... +++.||+|.+..... ...+++.+|+++++.++||||++++++|...+..++||
T Consensus 15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~ 94 (307)
T cd06607 15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVM 94 (307)
T ss_pred hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEH
Confidence 56888999999999999999965 689999998864322 23357889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCC
Q 005227 451 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 530 (707)
Q Consensus 451 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~ 530 (707)
||++ |++.+++.... ..+++..+..++.|++.||.|||+.+ |+|+||+|+||++++++.+||+|||++......
T Consensus 95 e~~~-g~l~~~~~~~~-~~l~~~~~~~~~~ql~~~L~~LH~~~---i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~- 168 (307)
T cd06607 95 EYCL-GSASDILEVHK-KPLQEVEIAAICHGALQGLAYLHSHE---RIHRDIKAGNILLTEPGTVKLADFGSASLVSPA- 168 (307)
T ss_pred HhhC-CCHHHHHHHcc-cCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCcccEEECCCCCEEEeecCcceecCCC-
Confidence 9996 68878775433 35899999999999999999999998 999999999999999999999999998754321
Q ss_pred CCCccccceecccccCCCccchhhhc---cCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhcc
Q 005227 531 IEGIVPAHVSTVVKGTPGYLDPEYFL---THKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVID 607 (707)
Q Consensus 531 ~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 607 (707)
....++..|+|||++. ...++.++||||||+++|||++|+.||............ ..
T Consensus 169 ----------~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~~----------~~ 228 (307)
T cd06607 169 ----------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHI----------AQ 228 (307)
T ss_pred ----------CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHHHH----------hc
Confidence 1235788999999884 356888999999999999999999999654432211110 00
Q ss_pred CCCCC-CChHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005227 608 GNMGS-YPSECVEKFIKLALKCCQDETDARPSMSEVMR 644 (707)
Q Consensus 608 ~~~~~-~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~ 644 (707)
..... .+..++..+.+++.+||+.+|++||++.+++.
T Consensus 229 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 266 (307)
T cd06607 229 NDSPTLSSNDWSDYFRNFVDSCLQKIPQDRPSSEELLK 266 (307)
T ss_pred CCCCCCCchhhCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 11111 12234445556666666666666665555543
No 346
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=7.3e-35 Score=304.95 Aligned_cols=198 Identities=27% Similarity=0.370 Sum_probs=169.0
Q ss_pred CCCccceEeeeCceEEEEEEe----CCCcEEEEEEeccCCh----hhHHHHHHHHHHHHcc-CCCcceeEEEEEEeCCeE
Q 005227 376 NFNSSTQIGQGGYGKVYKGIL----PDGTVVAVKRAQEGSL----QGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQ 446 (707)
Q Consensus 376 ~~~~~~~lG~G~fg~Vy~~~~----~~~~~vavK~l~~~~~----~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~ 446 (707)
+|++.+.||+|+||.||+|.. .+|+.||+|++..... ...+.+.+|+++++++ +|+||+++++++..+...
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL 80 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence 477889999999999999985 3689999999875322 2235678899999999 599999999999999999
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccC
Q 005227 447 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 526 (707)
Q Consensus 447 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~ 526 (707)
++||||+++++|.+++... ..+++..+..++.|+++||.|||+.+ ++||||+|+|||+++++.+||+|||++...
T Consensus 81 ~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~al~~lH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~~~ 155 (290)
T cd05613 81 HLILDYINGGELFTHLSQR--ERFKEQEVQIYSGEIVLALEHLHKLG---IIYRDIKLENILLDSNGHVVLTDFGLSKEF 155 (290)
T ss_pred EEEEecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeEECCCCCEEEeeCccceec
Confidence 9999999999999999654 35889999999999999999999998 999999999999999999999999999765
Q ss_pred CCCCCCCccccceecccccCCCccchhhhcc--CCCCCchhhHHHHHHHHHHHcCCCCCC
Q 005227 527 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT--HKLTDKSDVYSLGVVFLELLTGMQPIS 584 (707)
Q Consensus 527 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~s~~sDVwSlGvll~elltG~~pf~ 584 (707)
...+. .......|+..|+|||.+.+ ..++.++||||||+++|||++|+.||.
T Consensus 156 ~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~ 209 (290)
T cd05613 156 HEDEV------ERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFT 209 (290)
T ss_pred ccccc------cccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCC
Confidence 33221 11223458889999999875 346789999999999999999999985
No 347
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=3.3e-35 Score=314.52 Aligned_cols=289 Identities=25% Similarity=0.396 Sum_probs=208.3
Q ss_pred hcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccC--ChhhHHHHHHHHHHHHcc-CCCcceeEEEEEEeC--CeEE
Q 005227 374 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEG--SLQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEE--GEQM 447 (707)
Q Consensus 374 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~--~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~--~~~~ 447 (707)
.++|++.+.||+|+||.||+|... +++.||+|++... .......+.+|+.+++++ +|+||++++++|... ...+
T Consensus 6 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~~ 85 (337)
T cd07852 6 LRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDIY 85 (337)
T ss_pred hhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceEE
Confidence 467888999999999999999975 6889999988542 223345677899999999 999999999998654 3689
Q ss_pred EEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCC
Q 005227 448 LVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAP 527 (707)
Q Consensus 448 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~ 527 (707)
+||||++ ++|.+++... .+++..++.++.|++.||+|||+.+ |+||||||+||++++++.+||+|||++....
T Consensus 86 lv~e~~~-~~L~~~~~~~---~~~~~~~~~i~~qi~~~L~~LH~~~---i~H~dl~p~nill~~~~~~kl~d~g~~~~~~ 158 (337)
T cd07852 86 LVFEYME-TDLHAVIRAN---ILEDVHKRYIMYQLLKALKYIHSGN---VIHRDLKPSNILLNSDCRVKLADFGLARSLS 158 (337)
T ss_pred EEecccc-cCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCcEEEeeccchhccc
Confidence 9999996 5999988653 5889999999999999999999998 9999999999999999999999999998664
Q ss_pred CCCCCCccccceecccccCCCccchhhhcc-CCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhc
Q 005227 528 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVI 606 (707)
Q Consensus 528 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~ 606 (707)
...... .........|+..|+|||++.+ ..++.++|||||||++|||++|+.||....... ........
T Consensus 159 ~~~~~~--~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~-~~~~~~~~------- 228 (337)
T cd07852 159 ELEENP--ENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLN-QLEKIIEV------- 228 (337)
T ss_pred cccccc--cCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHH-------
Confidence 322110 0112233568899999998865 567889999999999999999999996543321 11111000
Q ss_pred cCCCCCCChHHHHHHH-HHHHHhcccCC-CCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCCCC
Q 005227 607 DGNMGSYPSECVEKFI-KLALKCCQDET-DARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKH 684 (707)
Q Consensus 607 ~~~~~~~~~~~~~~l~-~l~~~c~~~~p-~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~H 684 (707)
.+..+.+....+. .....++...+ ..++.+. ...+..+....+++.+|++.||++|||+.++++|
T Consensus 229 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~ 295 (337)
T cd07852 229 ---IGPPSAEDIESIKSPFAATMLDSLPSRPRKPLD----------ELLPKASDDALDLLKKLLVFNPNKRLTAEEALEH 295 (337)
T ss_pred ---hCCCCHHHHHHHHhhhHHHhhhhcccccccchh----------hhccCCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence 0111111111111 11111111111 1111111 1123334556789999999999999999999999
Q ss_pred CCCCCCCC
Q 005227 685 PYVSSDVS 692 (707)
Q Consensus 685 p~f~~~~~ 692 (707)
|||..-..
T Consensus 296 ~~~~~~~~ 303 (337)
T cd07852 296 PYVAQFHN 303 (337)
T ss_pred hhhhhhcc
Confidence 99966533
No 348
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=100.00 E-value=2.6e-35 Score=306.94 Aligned_cols=279 Identities=26% Similarity=0.384 Sum_probs=204.4
Q ss_pred CCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCCh-hhHHHHHHHHHHHHccC-CCcceeEEEEEEeCCeEEEEEecC
Q 005227 377 FNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLH-HRNLVSLVGYCDEEGEQMLVYEFM 453 (707)
Q Consensus 377 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~~lV~E~~ 453 (707)
|++.+.||+|+||+||+|... +++.||||++..... .......+|+..+++++ |+||+++++++...+..++||||+
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM 80 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC
Confidence 567889999999999999975 588999999865432 22334567999999998 999999999999999999999999
Q ss_pred CCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCCC
Q 005227 454 SNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEG 533 (707)
Q Consensus 454 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 533 (707)
+|+|.+++.......+++..+..++.|++.||.|||+.+ ++|+||+|+||++++++.++|+|||++.......
T Consensus 81 -~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~---i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~--- 153 (283)
T cd07830 81 -EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHG---FFHRDLKPENLLVSGPEVVKIADFGLAREIRSRP--- 153 (283)
T ss_pred -CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChhhEEEcCCCCEEEeecccceeccCCC---
Confidence 889999997765557899999999999999999999998 9999999999999999999999999997653221
Q ss_pred ccccceecccccCCCccchhhhcc-CCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCCCCC
Q 005227 534 IVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGS 612 (707)
Q Consensus 534 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 612 (707)
......++..|+|||++.. ..++.++||||||++++||++|+.||........ ..... ... ..
T Consensus 154 -----~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~-~~~~~------~~~----~~ 217 (283)
T cd07830 154 -----PYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQ-LYKIC------SVL----GT 217 (283)
T ss_pred -----CcCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHH-HHHHH------Hhc----CC
Confidence 1123457889999998854 5678999999999999999999999865433211 11100 000 01
Q ss_pred CChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCCCCCCC
Q 005227 613 YPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYV 687 (707)
Q Consensus 613 ~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f 687 (707)
...+....-..+. ..+...-..++.. + + ....+.......+|+.+|++.||++|||++|++.||||
T Consensus 218 ~~~~~~~~~~~~~-~~~~~~~~~~~~~-~----~---~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~~~~ 283 (283)
T cd07830 218 PTKQDWPEGYKLA-SKLGFRFPQFAPT-S----L---HQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQHPYF 283 (283)
T ss_pred CChhhhhhHhhhh-ccccccccccccc-c----H---HHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhCCCC
Confidence 1111111111111 0111000000000 0 0 11122334556789999999999999999999999998
No 349
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=2.3e-34 Score=300.54 Aligned_cols=203 Identities=28% Similarity=0.437 Sum_probs=177.9
Q ss_pred HhcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEe
Q 005227 373 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 451 (707)
Q Consensus 373 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E 451 (707)
.++.|+..+.||+|+||.||+|..+ +++.||+|++..... ..+.+.+|++.++.++|+|++++++++...+..++|+|
T Consensus 17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 95 (286)
T cd06614 17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVME 95 (286)
T ss_pred ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEEe
Confidence 4567888899999999999999976 689999999976544 45678899999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCC
Q 005227 452 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 531 (707)
Q Consensus 452 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 531 (707)
|+++++|.+++.... ..+++..+..++.|++.||+|||+.+ ++|+||+|+||+++.++.++|+|||++.......
T Consensus 96 ~~~~~~L~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~lH~~g---i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~- 170 (286)
T cd06614 96 YMDGGSLTDIITQNF-VRMNEPQIAYVCREVLQGLEYLHSQN---VIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEK- 170 (286)
T ss_pred ccCCCcHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCChhhEEEcCCCCEEECccchhhhhccch-
Confidence 999999999997654 46999999999999999999999988 9999999999999999999999999986543221
Q ss_pred CCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCc
Q 005227 532 EGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 587 (707)
Q Consensus 532 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~~ 587 (707)
.......++..|+|||++.+..++.++|||||||++|+|++|+.||....
T Consensus 171 ------~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~ 220 (286)
T cd06614 171 ------SKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREP 220 (286)
T ss_pred ------hhhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCC
Confidence 11223457889999999998889999999999999999999999986543
No 350
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=3e-34 Score=303.83 Aligned_cols=292 Identities=21% Similarity=0.218 Sum_probs=200.2
Q ss_pred cceEeeeCceEEEEEEeCCCcEEEEEEeccC--ChhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEecCCCCC
Q 005227 380 STQIGQGGYGKVYKGILPDGTVVAVKRAQEG--SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGT 457 (707)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gs 457 (707)
.+.+|.|+++.||++.. +++.||||++... .....+.+.+|+++++.++|+||+++++++...+..+++|||+++|+
T Consensus 7 ~~~~~~~~~v~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~ 85 (314)
T cd08216 7 GKCFEDLMIVHLAKHKP-TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGS 85 (314)
T ss_pred hHhhcCCceEEEEEecC-CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCC
Confidence 34445555555555544 7899999998754 23345689999999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCCCcccc
Q 005227 458 LRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPA 537 (707)
Q Consensus 458 L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~ 537 (707)
|.+++.......+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||.+..............
T Consensus 86 l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~---ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~~ 162 (314)
T cd08216 86 CEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKG---FIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVH 162 (314)
T ss_pred HHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCcceEEEecCCceEEecCccceeeccccccccccc
Confidence 999998765566899999999999999999999998 99999999999999999999999999875533221111111
Q ss_pred ceecccccCCCccchhhhcc--CCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCCCCCCCh
Q 005227 538 HVSTVVKGTPGYLDPEYFLT--HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPS 615 (707)
Q Consensus 538 ~~~~~~~gt~~y~aPE~~~~--~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 615 (707)
.......++..|+|||++.+ ..++.++|||||||++|||++|+.||............. . ......++... .+.
T Consensus 163 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~-~-~~~~~~~~~~~--~~~ 238 (314)
T cd08216 163 DFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKV-R-GTVPCLLDKST--YPL 238 (314)
T ss_pred cccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH-h-ccCccccccCc--hhh
Confidence 12233457788999999976 458899999999999999999999997654322211111 0 00000111000 000
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCHH-HHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCCCCCCCCCCCC
Q 005227 616 ECVEKFIKLALKCCQDETDARPSMS-EVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSSDVS 692 (707)
Q Consensus 616 ~~~~~l~~l~~~c~~~~p~~RPt~~-~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f~~~~~ 692 (707)
.. ..+.+ .+ .+..-+... ..-.... ...+..+.+|+.+||.+||++|||++|+|+||||.....
T Consensus 239 ~~-~~~~~---~~---~~~~~~~~~~~~~~~~~------~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p~~~~~~~ 303 (314)
T cd08216 239 YE-DSMSQ---SR---SSNEHPNNRDSVDHPYT------RTFSEHFHQFVELCLQRDPESRPSASQLLNHSFFKQCKR 303 (314)
T ss_pred hc-CCcCc---cc---ccccccchhhhhhcchh------hHHHHHHHHHHHHHhhcCCCcCcCHHHHhcCchHhhhcc
Confidence 00 00000 00 000000000 0000000 011223457899999999999999999999999986543
No 351
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00 E-value=1e-34 Score=298.74 Aligned_cols=248 Identities=23% Similarity=0.293 Sum_probs=190.7
Q ss_pred ceEeeeCceEEEEEEeC-CCcEEEEEEeccCChhh---HHHHHHHHHHH-HccCCCcceeEEEEEEeCCeEEEEEecCCC
Q 005227 381 TQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQG---EKEFLTEIQFL-SRLHHRNLVSLVGYCDEEGEQMLVYEFMSN 455 (707)
Q Consensus 381 ~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~---~~~~~~E~~~l-~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~ 455 (707)
+.||+|+||.||+|... +++.||+|.+....... ...+..|..++ ...+|+|++++++++...+..++||||+++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 46899999999999964 68999999986543221 23344555444 445899999999999999999999999999
Q ss_pred CCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCCCcc
Q 005227 456 GTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIV 535 (707)
Q Consensus 456 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 535 (707)
++|.+++... ..+++..+..++.|++.||.|||+.+ ++|+||+|+||++++++.+||+|||+++....
T Consensus 82 ~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~------- 149 (260)
T cd05611 82 GDCASLIKTL--GGLPEDWAKQYIAEVVLGVEDLHQRG---IIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE------- 149 (260)
T ss_pred CCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCcEEEeecccceeccc-------
Confidence 9999999654 35889999999999999999999998 99999999999999999999999999875422
Q ss_pred ccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCCCCCCCh
Q 005227 536 PAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPS 615 (707)
Q Consensus 536 ~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 615 (707)
.....++..|+|||.+.+..++.++||||||+++|||++|..||...... ....
T Consensus 150 ----~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~-~~~~--------------------- 203 (260)
T cd05611 150 ----NKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPD-AVFD--------------------- 203 (260)
T ss_pred ----cccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHH-HHHH---------------------
Confidence 12335788999999999888999999999999999999999999643221 0000
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCC---CcCCCCCCCCCC
Q 005227 616 ECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSS---SSMLKHPYVSSD 690 (707)
Q Consensus 616 ~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa---~e~L~Hp~f~~~ 690 (707)
.+....... .+. .....+....+++.+||+.+|++|+++ +|+|.||||..-
T Consensus 204 -------~~~~~~~~~----~~~-------------~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~~~~~~~~ 257 (260)
T cd05611 204 -------NILSRRINW----PEE-------------VKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIKSHPFFKSI 257 (260)
T ss_pred -------HHHhcccCC----CCc-------------ccccCCHHHHHHHHHHccCCHHHccCCCcHHHHHcChHhhcC
Confidence 000000000 000 001123344578899999999999976 599999999654
No 352
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.5e-36 Score=307.32 Aligned_cols=132 Identities=21% Similarity=0.355 Sum_probs=115.8
Q ss_pred hcCCCccceEeeeCceEEEEEEe-CCCcEEEEEEeccCChhhHHHHHHHHHHHHccC-----C---CcceeEEEEEEeC-
Q 005227 374 TNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLH-----H---RNLVSLVGYCDEE- 443 (707)
Q Consensus 374 ~~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-----h---~nIv~l~~~~~~~- 443 (707)
..+|.+.++||-|.|++||+|.+ .+.+.||+|+.+... ...+....||++|++++ | .+||+|++.|...
T Consensus 77 ~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAq-hYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsG 155 (590)
T KOG1290|consen 77 GGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQ-HYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSG 155 (590)
T ss_pred CceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhh-HHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecC
Confidence 36899999999999999999995 478899999987633 34567889999999984 3 3699999999654
Q ss_pred ---CeEEEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEE
Q 005227 444 ---GEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILL 509 (707)
Q Consensus 444 ---~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl 509 (707)
.+.|||+|++ |-+|..+|....-+.++...+++|++||+.||.|||.++ +|||.||||+|||+
T Consensus 156 pNG~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ec--gIIHTDlKPENvLl 221 (590)
T KOG1290|consen 156 PNGQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHREC--GIIHTDLKPENVLL 221 (590)
T ss_pred CCCcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhc--CccccCCCcceeee
Confidence 5899999999 779999999877788999999999999999999999987 49999999999999
No 353
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-35 Score=283.32 Aligned_cols=247 Identities=24% Similarity=0.389 Sum_probs=193.0
Q ss_pred CCccceEeeeCceEEEEEEeC-CCcEEEEEEeccC-ChhhHHHHHHHHHHHHcc-CCCcceeEEEEEEeCCeEEEEEecC
Q 005227 377 FNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEG-SLQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQMLVYEFM 453 (707)
Q Consensus 377 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~-~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lV~E~~ 453 (707)
.+....||.|+.|.||+++.+ +|..+|||.+... +.+..++++..+.++.+- .+|+||+.+|||..+...++.||.|
T Consensus 94 l~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMelM 173 (391)
T KOG0983|consen 94 LENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMELM 173 (391)
T ss_pred hhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHHH
Confidence 344677999999999999976 6899999998764 344557888888887766 4999999999999999999999999
Q ss_pred CCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCCC
Q 005227 454 SNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEG 533 (707)
Q Consensus 454 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 533 (707)
.-.+..++++ -..++++...-++...+.+||.||.+++ .|+|||+||+|||+|+.|++|++|||++-.+..
T Consensus 174 -s~C~ekLlkr-ik~piPE~ilGk~tva~v~AL~YLKeKH--~viHRDvKPSNILlDe~GniKlCDFGIsGrlvd----- 244 (391)
T KOG0983|consen 174 -STCAEKLLKR-IKGPIPERILGKMTVAIVKALYYLKEKH--GVIHRDVKPSNILLDERGNIKLCDFGISGRLVD----- 244 (391)
T ss_pred -HHHHHHHHHH-hcCCchHHhhhhhHHHHHHHHHHHHHhc--ceeecccCccceEEccCCCEEeecccccceeec-----
Confidence 3355566654 3456999999999999999999998865 499999999999999999999999999976643
Q ss_pred ccccceecccccCCCccchhhhcc---CCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCCC
Q 005227 534 IVPAHVSTVVKGTPGYLDPEYFLT---HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 610 (707)
Q Consensus 534 ~~~~~~~~~~~gt~~y~aPE~~~~---~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 610 (707)
+...+...|.+.|||||.+.- ..|+.++||||||++++||.||+.||...+...+.+.. +.+.+.
T Consensus 245 ---SkAhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltk---------vln~eP 312 (391)
T KOG0983|consen 245 ---SKAHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTK---------VLNEEP 312 (391)
T ss_pred ---ccccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHH---------HHhcCC
Confidence 333455679999999999964 47888999999999999999999999764433222222 222111
Q ss_pred CC--CChHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005227 611 GS--YPSECVEKFIKLALKCCQDETDARPSMSEVMR 644 (707)
Q Consensus 611 ~~--~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~ 644 (707)
+. ....++..+.+++..|+++|+.+||...++++
T Consensus 313 P~L~~~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~ 348 (391)
T KOG0983|consen 313 PLLPGHMGFSPDFQSFVKDCLTKDHRKRPKYNKLLE 348 (391)
T ss_pred CCCCcccCcCHHHHHHHHHHhhcCcccCcchHHHhc
Confidence 11 22235667777777777777777777776654
No 354
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=5.9e-34 Score=290.44 Aligned_cols=199 Identities=34% Similarity=0.515 Sum_probs=177.0
Q ss_pred CCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEecCC
Q 005227 376 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMS 454 (707)
Q Consensus 376 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~ 454 (707)
+|+..+.||+|++|.||++... +++.|++|++........+.+.+|+++++.++|+|++++++++......++++||++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~ 80 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCS 80 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCC
Confidence 4778899999999999999975 789999999987655456789999999999999999999999999999999999999
Q ss_pred CCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCCCc
Q 005227 455 NGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGI 534 (707)
Q Consensus 455 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 534 (707)
+++|.+++.... ..+++..+..++.|++.||+|||+.+ ++|+||+|+||++++++.++|+|||.+........
T Consensus 81 ~~~L~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~~---i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~--- 153 (253)
T cd05122 81 GGSLKDLLKSTN-QTLTESQIAYVCKELLKGLEYLHSNG---IIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA--- 153 (253)
T ss_pred CCcHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHhhcCC---EecCCCCHHHEEEccCCeEEEeecccccccccccc---
Confidence 999999986643 46899999999999999999999988 99999999999999999999999999876543210
Q ss_pred cccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCC
Q 005227 535 VPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 586 (707)
Q Consensus 535 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~ 586 (707)
.....++..|+|||.+.+..++.++||||||+++|+|++|+.||...
T Consensus 154 -----~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~ 200 (253)
T cd05122 154 -----RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSEL 200 (253)
T ss_pred -----ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCC
Confidence 23456788999999999888999999999999999999999999654
No 355
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-34 Score=330.52 Aligned_cols=265 Identities=28% Similarity=0.476 Sum_probs=218.8
Q ss_pred HHHHHhcCCCccceEeeeCceEEEEEEeC----C----CcEEEEEEeccCChh-hHHHHHHHHHHHHcc-CCCcceeEEE
Q 005227 369 EMALATNNFNSSTQIGQGGYGKVYKGILP----D----GTVVAVKRAQEGSLQ-GEKEFLTEIQFLSRL-HHRNLVSLVG 438 (707)
Q Consensus 369 ~l~~~~~~~~~~~~lG~G~fg~Vy~~~~~----~----~~~vavK~l~~~~~~-~~~~~~~E~~~l~~l-~h~nIv~l~~ 438 (707)
.++...++..+.+.||+|.||.||+|... . ...||||.++..... ..+.+..|+++|+.+ +|+||+.++|
T Consensus 290 ~~e~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG 369 (609)
T KOG0200|consen 290 KWEIPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLG 369 (609)
T ss_pred ceeechhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhhee
Confidence 45555666667779999999999999843 1 457999999865443 457899999999999 5999999999
Q ss_pred EEEeCCeEEEEEecCCCCCHHHHHhhcC------------C--CCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCC
Q 005227 439 YCDEEGEQMLVYEFMSNGTLRDQLSAKS------------K--EPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKA 504 (707)
Q Consensus 439 ~~~~~~~~~lV~E~~~~gsL~~~l~~~~------------~--~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp 504 (707)
+|...+..++|+||+..|+|.++++... . ..+.....+.++.|||.|++||++.. +|||||.+
T Consensus 370 ~~t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~---~vHRDLAa 446 (609)
T KOG0200|consen 370 ACTQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVP---CVHRDLAA 446 (609)
T ss_pred eeccCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCC---ccchhhhh
Confidence 9999999999999999999999998754 0 23888999999999999999999988 99999999
Q ss_pred CCEEEcCCCcEEEeeecccccCCCCCCCCccccceeccccc--CCCccchhhhccCCCCCchhhHHHHHHHHHHHc-CCC
Q 005227 505 SNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKG--TPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQ 581 (707)
Q Consensus 505 ~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~g--t~~y~aPE~~~~~~~s~~sDVwSlGvll~ellt-G~~ 581 (707)
+|||+.++..+||+|||+|+.....+.. ......| ...|||||.+....|+.++||||||++||||+| |..
T Consensus 447 RNVLi~~~~~~kIaDFGlar~~~~~~~y------~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~ 520 (609)
T KOG0200|consen 447 RNVLITKNKVIKIADFGLARDHYNKDYY------RTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGT 520 (609)
T ss_pred hhEEecCCCEEEEccccceeccCCCCce------EecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCC
Confidence 9999999999999999999975544322 1111122 346999999999999999999999999999999 889
Q ss_pred CCCCCchhHHHHHHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 005227 582 PISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 651 (707)
Q Consensus 582 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~ 651 (707)
||.......+. ...+.++.+...|..|..+++++|..||+.+|++||++.++.+.++....
T Consensus 521 PYp~~~~~~~l---------~~~l~~G~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~l~ 581 (609)
T KOG0200|consen 521 PYPGIPPTEEL---------LEFLKEGNRMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKHLQ 581 (609)
T ss_pred CCCCCCcHHHH---------HHHHhcCCCCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHHHH
Confidence 99652211111 11344566777899999999999999999999999999999999988543
No 356
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=3.9e-34 Score=293.07 Aligned_cols=201 Identities=30% Similarity=0.514 Sum_probs=176.9
Q ss_pred CCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCCh--hhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEec
Q 005227 376 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 452 (707)
Q Consensus 376 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~ 452 (707)
+|+..+.||+|+||.||++... +++.||+|++..... ...+.+.+|+++++.++|+|++++++.+...+..++|+||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~ 80 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEY 80 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEe
Confidence 5788899999999999999975 689999999876433 4456789999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcC--CCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCC
Q 005227 453 MSNGTLRDQLSAKS--KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 530 (707)
Q Consensus 453 ~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~ 530 (707)
+++++|.+++.... ...+++..+..++.+++.||.|||+.+ ++|+||+|+||++++++.++|+|||.+.......
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~---~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~ 157 (258)
T cd08215 81 ADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRK---ILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTV 157 (258)
T ss_pred cCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCC---EecccCChHHeEEcCCCcEEECCccceeecccCc
Confidence 99999999997643 467999999999999999999999998 9999999999999999999999999997654321
Q ss_pred CCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCC
Q 005227 531 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 586 (707)
Q Consensus 531 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~ 586 (707)
.......|++.|+|||...+..++.++||||+|+++++|++|+.||...
T Consensus 158 -------~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~ 206 (258)
T cd08215 158 -------DLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGE 206 (258)
T ss_pred -------ceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCC
Confidence 1223346788999999999989999999999999999999999998643
No 357
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=5.4e-34 Score=303.91 Aligned_cols=205 Identities=24% Similarity=0.297 Sum_probs=165.9
Q ss_pred ceEeee--CceEEEEEEeC-CCcEEEEEEeccCC--hhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEecCCC
Q 005227 381 TQIGQG--GYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSN 455 (707)
Q Consensus 381 ~~lG~G--~fg~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~ 455 (707)
..||+| +||+||+|... +|+.||+|++.... ....+.+.+|+.+++.++||||++++++|...+..++||||+.+
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~ 83 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAY 83 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccC
Confidence 456666 99999999964 79999999987533 22346788999999999999999999999999999999999999
Q ss_pred CCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCCCcc
Q 005227 456 GTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIV 535 (707)
Q Consensus 456 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 535 (707)
++|.+++.......+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.++++||+.+............
T Consensus 84 ~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~---ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (328)
T cd08226 84 GSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNG---YIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKV 160 (328)
T ss_pred CCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEeCCCcEEEechHHHhhhhccCccccc
Confidence 99999998765566899999999999999999999998 999999999999999999999999865433221100000
Q ss_pred ccceecccccCCCccchhhhcc--CCCCCchhhHHHHHHHHHHHcCCCCCCCCch
Q 005227 536 PAHVSTVVKGTPGYLDPEYFLT--HKLTDKSDVYSLGVVFLELLTGMQPISHGKN 588 (707)
Q Consensus 536 ~~~~~~~~~gt~~y~aPE~~~~--~~~s~~sDVwSlGvll~elltG~~pf~~~~~ 588 (707)
.........++..|+|||++.+ ..++.++|||||||++|||++|+.||.....
T Consensus 161 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~ 215 (328)
T cd08226 161 VYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLR 215 (328)
T ss_pred cccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcCh
Confidence 0000111234667999999976 4578999999999999999999999975443
No 358
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-36 Score=342.84 Aligned_cols=254 Identities=27% Similarity=0.381 Sum_probs=209.2
Q ss_pred hcCCCccceEeeeCceEEEEEE-eCCCcEEEEEEeccCC--hhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEE
Q 005227 374 TNNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 450 (707)
Q Consensus 374 ~~~~~~~~~lG~G~fg~Vy~~~-~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~ 450 (707)
+-++....+||.|.||.||.|. .++|...|+|-+.... ....+.+.+|+.++..++|||+|+++|+=.+.+..+|.|
T Consensus 1234 ~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFM 1313 (1509)
T KOG4645|consen 1234 TFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFM 1313 (1509)
T ss_pred eeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHHH
Confidence 4567778999999999999999 5689999999765432 223467889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCC
Q 005227 451 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 530 (707)
Q Consensus 451 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~ 530 (707)
|||++|+|.+++.. ....++.....+..|++.|++|||+++ ||||||||.||+++.+|.+|++|||.|......-
T Consensus 1314 EyC~~GsLa~ll~~--gri~dE~vt~vyt~qll~gla~LH~~g---IVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~ 1388 (1509)
T KOG4645|consen 1314 EYCEGGSLASLLEH--GRIEDEMVTRVYTKQLLEGLAYLHEHG---IVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNA 1388 (1509)
T ss_pred HHhccCcHHHHHHh--cchhhhhHHHHHHHHHHHHHHHHHhcC---ceecCCCccceeeecCCcEEeecccceeEecCch
Confidence 99999999999954 334777788889999999999999999 9999999999999999999999999998765431
Q ss_pred CCCccccceecccccCCCccchhhhccC---CCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhcc
Q 005227 531 IEGIVPAHVSTVVKGTPGYLDPEYFLTH---KLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVID 607 (707)
Q Consensus 531 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 607 (707)
... ........||+.|||||++.+. ...-+.||||+|||+.||+||++||..-++. ...++.+..
T Consensus 1389 --~~~-~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne---------~aIMy~V~~ 1456 (1509)
T KOG4645|consen 1389 --QTM-PGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNE---------WAIMYHVAA 1456 (1509)
T ss_pred --hcC-CHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccch---------hHHHhHHhc
Confidence 011 1223467899999999999863 4566899999999999999999999754431 224567777
Q ss_pred CCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005227 608 GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMR 644 (707)
Q Consensus 608 ~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~ 644 (707)
+..+.+|+....+=.+++..|++.||+.|.++.|+++
T Consensus 1457 gh~Pq~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle 1493 (1509)
T KOG4645|consen 1457 GHKPQIPERLSSEGRDFLEHCLEQDPKMRWTASQLLE 1493 (1509)
T ss_pred cCCCCCchhhhHhHHHHHHHHHhcCchhhhHHHHHHH
Confidence 7778888887788888888888888888877765543
No 359
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=6.2e-34 Score=298.62 Aligned_cols=264 Identities=14% Similarity=0.162 Sum_probs=189.2
Q ss_pred hcCCCccceEeeeCceEEEEEEeCC----CcEEEEEEeccCChh--hH---------HHHHHHHHHHHccCCCcceeEEE
Q 005227 374 TNNFNSSTQIGQGGYGKVYKGILPD----GTVVAVKRAQEGSLQ--GE---------KEFLTEIQFLSRLHHRNLVSLVG 438 (707)
Q Consensus 374 ~~~~~~~~~lG~G~fg~Vy~~~~~~----~~~vavK~l~~~~~~--~~---------~~~~~E~~~l~~l~h~nIv~l~~ 438 (707)
.++|.+.+.||+|+||+||+|...+ +..+|+|+....... .+ .....+...+..+.|+|++++++
T Consensus 11 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~ 90 (294)
T PHA02882 11 GKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYG 90 (294)
T ss_pred CCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEE
Confidence 4679999999999999999999653 456777754322211 11 11223445566778999999999
Q ss_pred EEEeCC----eEEEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCc
Q 005227 439 YCDEEG----EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFT 514 (707)
Q Consensus 439 ~~~~~~----~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~ 514 (707)
++.... ..++++|++. .++.+.+... ...++..++.++.|+++||+|||+.+ |+||||||+|||++.++.
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~---iiHrDiKp~Nill~~~~~ 164 (294)
T PHA02882 91 CGSFKRCRMYYRFILLEKLV-ENTKEIFKRI--KCKNKKLIKNIMKDMLTTLEYIHEHG---ISHGDIKPENIMVDGNNR 164 (294)
T ss_pred eeeEecCCceEEEEEEehhc-cCHHHHHHhh--ccCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCc
Confidence 875543 4578888874 4777776543 23578889999999999999999998 999999999999999999
Q ss_pred EEEeeecccccCCCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHH
Q 005227 515 AKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVN 594 (707)
Q Consensus 515 ~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~ 594 (707)
++|+|||+|+....................||+.|+|||++.+..++.++|||||||++|||++|+.||...........
T Consensus 165 ~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~ 244 (294)
T PHA02882 165 GYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIH 244 (294)
T ss_pred EEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHH
Confidence 99999999987643221111111122334699999999999999999999999999999999999999975432211111
Q ss_pred HHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 005227 595 IAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMREL 646 (707)
Q Consensus 595 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L 646 (707)
... .+....+..+.. ....++..+.+++..|++.+|++||++.++.+.+
T Consensus 245 ~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~ 293 (294)
T PHA02882 245 AAK-CDFIKRLHEGKI--KIKNANKFIYDFIECVTKLSYEEKPDYDALIKIF 293 (294)
T ss_pred HhH-HHHHHHhhhhhh--ccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhh
Confidence 100 000111111111 1223467799999999999999999999998765
No 360
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=1.9e-34 Score=301.35 Aligned_cols=199 Identities=29% Similarity=0.410 Sum_probs=165.6
Q ss_pred CCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCCh-hhHHHHHHHHHHHHccC-CCcceeEEEEEEeCCeEEEEEec
Q 005227 376 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLH-HRNLVSLVGYCDEEGEQMLVYEF 452 (707)
Q Consensus 376 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~~lV~E~ 452 (707)
+|...+.||+|+||.||++... +++.||+|.+..... .....+.+|+.++.++. |+||+++++++..++..++||||
T Consensus 5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~ 84 (288)
T cd06616 5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMEL 84 (288)
T ss_pred HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEec
Confidence 4556788999999999999965 689999999875332 34567889999999996 99999999999999999999999
Q ss_pred CCCCCHHHHH---hhcCCCCcCHHHHHHHHHHHHHHHHHHHhC-CCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCC
Q 005227 453 MSNGTLRDQL---SAKSKEPLGFAMRLSIALGSSRGILYLHTE-ADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 528 (707)
Q Consensus 453 ~~~gsL~~~l---~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~-~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~ 528 (707)
+. +++.++. .......+++..+..++.|++.||+|||+. + |+||||||+||++++++.+||+|||+++....
T Consensus 85 ~~-~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~---i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~ 160 (288)
T cd06616 85 MD-ISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELK---IIHRDVKPSNILLDRNGNIKLCDFGISGQLVD 160 (288)
T ss_pred cc-CCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCC---eeccCCCHHHEEEccCCcEEEeecchhHHhcc
Confidence 85 4665543 233345699999999999999999999975 6 99999999999999999999999999975432
Q ss_pred CCCCCccccceecccccCCCccchhhhccC---CCCCchhhHHHHHHHHHHHcCCCCCCCC
Q 005227 529 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTH---KLTDKSDVYSLGVVFLELLTGMQPISHG 586 (707)
Q Consensus 529 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~s~~sDVwSlGvll~elltG~~pf~~~ 586 (707)
.. ......|+..|+|||++.+. .++.++|||||||++|||++|+.||...
T Consensus 161 ~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~ 213 (288)
T cd06616 161 SI--------AKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKW 213 (288)
T ss_pred CC--------ccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhc
Confidence 21 11233578899999999876 6899999999999999999999999643
No 361
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=9.6e-34 Score=290.10 Aligned_cols=202 Identities=29% Similarity=0.449 Sum_probs=176.9
Q ss_pred CCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCCh--hhHHHHHHHHHHHHccCCCcceeEEEEEEeC--CeEEEEE
Q 005227 376 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE--GEQMLVY 450 (707)
Q Consensus 376 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~--~~~~lV~ 450 (707)
+|+..+.||+|++|.||+|..+ +++.|++|++..... ...+.+.+|++++++++|+||+++++.+... ...++|+
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 80 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFL 80 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEE
Confidence 4778899999999999999976 789999999876443 3456889999999999999999999999888 8999999
Q ss_pred ecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCC
Q 005227 451 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 530 (707)
Q Consensus 451 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~ 530 (707)
||+++++|.+++.... .+++..++.++.|+++||+|||+.+ ++|+||+|+||++++++.++|+|||.+.......
T Consensus 81 e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lh~~~---~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~ 155 (260)
T cd06606 81 EYVSGGSLSSLLKKFG--KLPEPVIRKYTRQILEGLAYLHSNG---IVHRDIKGANILVDSDGVVKLADFGCAKRLGDIE 155 (260)
T ss_pred EecCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEcCCCCEEEcccccEEeccccc
Confidence 9999999999997654 6999999999999999999999988 9999999999999999999999999998765432
Q ss_pred CCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCc
Q 005227 531 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 587 (707)
Q Consensus 531 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~~ 587 (707)
.. .......++..|+|||.+.+..++.++||||||+++++|++|..||....
T Consensus 156 ~~-----~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~ 207 (260)
T cd06606 156 TG-----EGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELG 207 (260)
T ss_pred cc-----ccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 10 01234567889999999998889999999999999999999999997544
No 362
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=100.00 E-value=9.8e-35 Score=290.67 Aligned_cols=268 Identities=23% Similarity=0.335 Sum_probs=224.3
Q ss_pred HHHHHHHhcCCCccceEeeeCceEEEEEEeCC------CcEEEEEEeccCCh-hhHHHHHHHHHHHHccCCCcceeEEEE
Q 005227 367 YGEMALATNNFNSSTQIGQGGYGKVYKGILPD------GTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGY 439 (707)
Q Consensus 367 ~~~l~~~~~~~~~~~~lG~G~fg~Vy~~~~~~------~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~ 439 (707)
..++....++++....+-+|.||.||.|.|++ .+.|.||.++.... .....+..|.-.+..+.|||+..+.++
T Consensus 276 ~~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V 355 (563)
T KOG1024|consen 276 LQELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGV 355 (563)
T ss_pred HHhhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEE
Confidence 35777778889999999999999999998653 34577887765432 234568899999999999999999999
Q ss_pred EEeC-CeEEEEEecCCCCCHHHHHhh------cCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCC
Q 005227 440 CDEE-GEQMLVYEFMSNGTLRDQLSA------KSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHK 512 (707)
Q Consensus 440 ~~~~-~~~~lV~E~~~~gsL~~~l~~------~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~ 512 (707)
+.++ ...+++|.++.-|+|..+|.. ...+.+...+...++.|++.|++|||+++ |||.||.++|+++|+.
T Consensus 356 ~ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~---ViHkDiAaRNCvIdd~ 432 (563)
T KOG1024|consen 356 SIEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHG---VIHKDIAARNCVIDDQ 432 (563)
T ss_pred EeeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcC---cccchhhhhcceehhh
Confidence 8554 567899999999999999972 34456788889999999999999999999 9999999999999999
Q ss_pred CcEEEeeecccccCCCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc-CCCCCCCCchhHH
Q 005227 513 FTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVR 591 (707)
Q Consensus 513 ~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~ellt-G~~pf~~~~~~~~ 591 (707)
.++||+|=.+++.+-+.|++... .....+..||+||.+....|+.++|||||||+||||+| |+.|+..-+..
T Consensus 433 LqVkltDsaLSRDLFP~DYhcLG-----DnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPf-- 505 (563)
T KOG1024|consen 433 LQVKLTDSALSRDLFPGDYHCLG-----DNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPF-- 505 (563)
T ss_pred eeEEeccchhccccCcccccccC-----CCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHH--
Confidence 99999999999988777654322 22235678999999999999999999999999999999 99999754432
Q ss_pred HHHHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhc
Q 005227 592 EVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNM 652 (707)
Q Consensus 592 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~ 652 (707)
+....+.|+.+...|-+|+++++.+|..||...|++||++++++.-|.++...
T Consensus 506 --------Em~~ylkdGyRlaQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF~~q 558 (563)
T KOG1024|consen 506 --------EMEHYLKDGYRLAQPFNCPDELFTVMACCWALLPEERPSFSQLVICLSEFHTQ 558 (563)
T ss_pred --------HHHHHHhccceecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHH
Confidence 22234567777788999999999999999999999999999999998876543
No 363
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=4.4e-34 Score=292.78 Aligned_cols=246 Identities=25% Similarity=0.412 Sum_probs=193.6
Q ss_pred CCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCC--hhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEec
Q 005227 376 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 452 (707)
Q Consensus 376 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~ 452 (707)
+|++.+.||+|+||.||++... +++.+|+|.+.... ......+.+|++++++++|+||+++++++......++||||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEY 80 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehh
Confidence 5788999999999999999864 78899999987533 22345678899999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhc--CCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCC
Q 005227 453 MSNGTLRDQLSAK--SKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 530 (707)
Q Consensus 453 ~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~ 530 (707)
+++++|.+++... ....+++..++.++.|+++||+|||+.+ ++|+||+|+||++++++.+|++|||+++.....
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~---i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~- 156 (256)
T cd08530 81 APFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQK---ILHRDLKSANILLVANDLVKIGDLGISKVLKKN- 156 (256)
T ss_pred cCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCcceEEEecCCcEEEeeccchhhhccC-
Confidence 9999999998662 2356899999999999999999999998 999999999999999999999999999876432
Q ss_pred CCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCCC
Q 005227 531 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 610 (707)
Q Consensus 531 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 610 (707)
......++..|+|||.+.+..++.++|+||||+++|||++|+.||...... . ... .+.....
T Consensus 157 --------~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~-~-~~~--------~~~~~~~ 218 (256)
T cd08530 157 --------MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQ-D-LRY--------KVQRGKY 218 (256)
T ss_pred --------CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-H-HHH--------HHhcCCC
Confidence 112245788999999999999999999999999999999999999654321 1 010 0111222
Q ss_pred CCCChHHHHHHHHHHHHhcccCCCCCCCHHHHH
Q 005227 611 GSYPSECVEKFIKLALKCCQDETDARPSMSEVM 643 (707)
Q Consensus 611 ~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~ 643 (707)
...+..+...+.+++.+|++.+|++||++.+++
T Consensus 219 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l 251 (256)
T cd08530 219 PPIPPIYSQDLQNFIRSMLQVKPKLRPNCDKIL 251 (256)
T ss_pred CCCchhhCHHHHHHHHHHcCCCcccCCCHHHHh
Confidence 223334445555555555555555555555544
No 364
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=100.00 E-value=5.4e-35 Score=313.60 Aligned_cols=282 Identities=22% Similarity=0.353 Sum_probs=207.5
Q ss_pred HhcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCC--hhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCe----
Q 005227 373 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGE---- 445 (707)
Q Consensus 373 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~---- 445 (707)
..++|+..+.||+|+||.||+|... +++.||||++.... ....+.+.+|+.+++.++|+|++++++++...+.
T Consensus 13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07851 13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDF 92 (343)
T ss_pred ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccccc
Confidence 3568999999999999999999975 68899999886432 2234567889999999999999999998765554
Q ss_pred --EEEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeeccc
Q 005227 446 --QMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLS 523 (707)
Q Consensus 446 --~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla 523 (707)
.++|+||+ +++|.+++.. ..+++..++.++.|+++||+|||+.+ |+||||||+||++++++.+||+|||++
T Consensus 93 ~~~~lv~e~~-~~~L~~~~~~---~~l~~~~~~~~~~ql~~aL~~LH~~g---i~H~dlkp~Nill~~~~~~kL~dfg~~ 165 (343)
T cd07851 93 QDVYLVTHLM-GADLNNIVKC---QKLSDDHIQFLVYQILRGLKYIHSAG---IIHRDLKPSNIAVNEDCELKILDFGLA 165 (343)
T ss_pred ccEEEEEecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCCEEEcccccc
Confidence 89999999 6799999864 35899999999999999999999998 999999999999999999999999999
Q ss_pred ccCCCCCCCCccccceecccccCCCccchhhhcc-CCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccc
Q 005227 524 RLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMM 602 (707)
Q Consensus 524 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~ 602 (707)
...... .....++..|+|||.+.+ ..++.++|||||||++|||++|+.||...... ..+......
T Consensus 166 ~~~~~~----------~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~-~~~~~i~~~--- 231 (343)
T cd07851 166 RHTDDE----------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHI-DQLKRIMNL--- 231 (343)
T ss_pred cccccc----------ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHHh---
Confidence 765321 123357888999999875 46788999999999999999999999754432 222211110
Q ss_pred hhhccCCCCCCChHHHHHHHHH-H-HHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCc
Q 005227 603 FSVIDGNMGSYPSECVEKFIKL-A-LKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSS 680 (707)
Q Consensus 603 ~~~~~~~~~~~~~~~~~~l~~l-~-~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e 680 (707)
....++.....+..- . ..+.......++...++ .+..+....+|+.+||..||++|||++|
T Consensus 232 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~s~~l~dli~~~l~~~P~~Rpt~~e 294 (343)
T cd07851 232 -------VGTPDEELLQKISSESARNYIQSLPQMPKKDFKEV----------FSGANPLAIDLLEKMLVLDPDKRITAAE 294 (343)
T ss_pred -------cCCCCHHHHhhccchhHHHHHHhccccCCCCHHHH----------hccCCHHHHHHHHHhCCCChhhCCCHHH
Confidence 011111111111000 0 00000011111222111 1233556778999999999999999999
Q ss_pred CCCCCCCCCCCC
Q 005227 681 MLKHPYVSSDVS 692 (707)
Q Consensus 681 ~L~Hp~f~~~~~ 692 (707)
+++||||..-..
T Consensus 295 ll~h~~~~~~~~ 306 (343)
T cd07851 295 ALAHPYLAEYHD 306 (343)
T ss_pred HhcCCCccccCC
Confidence 999999975443
No 365
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=100.00 E-value=1.4e-34 Score=308.25 Aligned_cols=287 Identities=24% Similarity=0.364 Sum_probs=208.1
Q ss_pred HHHHHhcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCC--hhhHHHHHHHHHHHHccCCCcceeEEEEEEe-CC
Q 005227 369 EMALATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE-EG 444 (707)
Q Consensus 369 ~l~~~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~-~~ 444 (707)
++...+++|++.+.||+|+||.||+|... +++.||||++.... ....+.+.+|+++++.++||||+++++++.. ..
T Consensus 4 ~~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~ 83 (328)
T cd07856 4 TVFEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLE 83 (328)
T ss_pred ceeccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCC
Confidence 44557889999999999999999999965 78999999875422 2234678899999999999999999999865 55
Q ss_pred eEEEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccc
Q 005227 445 EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSR 524 (707)
Q Consensus 445 ~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~ 524 (707)
..++|+||+ +++|.+++.. ..+++.....++.|+++||+|||+.+ |+||||+|+||++++++.+||+|||.+.
T Consensus 84 ~~~lv~e~~-~~~L~~~~~~---~~~~~~~~~~~~~ql~~aL~~LH~~~---iiH~dl~p~Nili~~~~~~~l~dfg~~~ 156 (328)
T cd07856 84 DIYFVTELL-GTDLHRLLTS---RPLEKQFIQYFLYQILRGLKYVHSAG---VVHRDLKPSNILINENCDLKICDFGLAR 156 (328)
T ss_pred cEEEEeehh-ccCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEeECCCCCEEeCcccccc
Confidence 789999999 5699888853 34788888999999999999999998 9999999999999999999999999987
Q ss_pred cCCCCCCCCccccceecccccCCCccchhhhcc-CCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccch
Q 005227 525 LAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMF 603 (707)
Q Consensus 525 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~ 603 (707)
..... .....++..|+|||++.+ ..++.++|||||||++|||++|+.||......... ....
T Consensus 157 ~~~~~----------~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~-~~~~------ 219 (328)
T cd07856 157 IQDPQ----------MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQF-SIIT------ 219 (328)
T ss_pred ccCCC----------cCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHH-HHHH------
Confidence 54221 122356788999999866 67899999999999999999999999654321111 1000
Q ss_pred hhccCCCCCCChHHHHHHHH-HHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCC
Q 005227 604 SVIDGNMGSYPSECVEKFIK-LALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSML 682 (707)
Q Consensus 604 ~~~~~~~~~~~~~~~~~l~~-l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L 682 (707)
...+..+++....+.. -....+..-+...+.. .....+..+....+++.+||+.+|++|+|+++++
T Consensus 220 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell 286 (328)
T cd07856 220 ----DLLGTPPDDVINTICSENTLRFVQSLPKREPVP---------FSEKFKNADPSAIDLLEKMLVFDPQKRISAAEAL 286 (328)
T ss_pred ----HHhCCCCHHHHHhccchhhHHHHhhccccCCCc---------HHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHh
Confidence 0011112211111000 0000011111111100 0012233345566899999999999999999999
Q ss_pred CCCCCCCCCC
Q 005227 683 KHPYVSSDVS 692 (707)
Q Consensus 683 ~Hp~f~~~~~ 692 (707)
.||||.....
T Consensus 287 ~~~~~~~~~~ 296 (328)
T cd07856 287 AHPYLAPYHD 296 (328)
T ss_pred cCCccccccC
Confidence 9999965444
No 366
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=8.6e-34 Score=290.11 Aligned_cols=200 Identities=32% Similarity=0.521 Sum_probs=175.8
Q ss_pred CCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCCh--hhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEec
Q 005227 376 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 452 (707)
Q Consensus 376 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~ 452 (707)
+|+..+.||+|++|.||+|... +++.|++|.+..... ...+.+.+|++++++++|+|++++++++...+..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEY 80 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEec
Confidence 4788899999999999999865 688999999876544 3456789999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCC
Q 005227 453 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 532 (707)
Q Consensus 453 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 532 (707)
+++++|.+++... ..+++..++.++.|++.||.|||+.+ |+||||||+||+++.++.++|+|||.+........
T Consensus 81 ~~~~~L~~~~~~~--~~l~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~- 154 (254)
T cd06627 81 AENGSLRQIIKKF--GPFPESLVAVYVYQVLQGLAYLHEQG---VIHRDIKAANILTTKDGVVKLADFGVATKLNDVSK- 154 (254)
T ss_pred CCCCcHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCHHHEEECCCCCEEEeccccceecCCCcc-
Confidence 9999999999654 46899999999999999999999998 99999999999999999999999999987643221
Q ss_pred CccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCc
Q 005227 533 GIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 587 (707)
Q Consensus 533 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~~ 587 (707)
......++..|+|||...+..++.++||||+|+++|+|++|+.||....
T Consensus 155 ------~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~ 203 (254)
T cd06627 155 ------DDASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLN 203 (254)
T ss_pred ------cccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCcc
Confidence 1233457889999999988888999999999999999999999986443
No 367
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=100.00 E-value=2.2e-34 Score=307.47 Aligned_cols=282 Identities=24% Similarity=0.332 Sum_probs=201.4
Q ss_pred CCCccceEeeeCceEEEEEEeC-C--CcEEEEEEeccCC--hhhHHHHHHHHHHHHcc-CCCcceeEEEEEEeC----Ce
Q 005227 376 NFNSSTQIGQGGYGKVYKGILP-D--GTVVAVKRAQEGS--LQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEE----GE 445 (707)
Q Consensus 376 ~~~~~~~lG~G~fg~Vy~~~~~-~--~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~----~~ 445 (707)
+|++.+.||+|+||.||++... + +..||+|++.... ....+.+.+|+++++++ +|+||+++++++... ..
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~ 80 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE 80 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence 4778899999999999999965 4 7899999886432 22346788999999999 599999999975432 45
Q ss_pred EEEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeeccccc
Q 005227 446 QMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRL 525 (707)
Q Consensus 446 ~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~ 525 (707)
.++++||+. ++|.+++.. ...+++..++.++.||+.||+|||+.+ |+||||||+||++++++.+||+|||+++.
T Consensus 81 ~~~~~e~~~-~~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~g---ivH~dlkp~Nili~~~~~~kl~Dfg~a~~ 154 (332)
T cd07857 81 LYLYEELME-ADLHQIIRS--GQPLTDAHFQSFIYQILCGLKYIHSAN---VLHRDLKPGNLLVNADCELKICDFGLARG 154 (332)
T ss_pred EEEEEeccc-CCHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHeEEcCCCCEEeCcCCCcee
Confidence 788999985 699998854 345899999999999999999999998 99999999999999999999999999986
Q ss_pred CCCCCCCCccccceecccccCCCccchhhhcc-CCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchh
Q 005227 526 APVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFS 604 (707)
Q Consensus 526 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~ 604 (707)
....... .........|+..|+|||++.+ ..++.++||||+||++|+|++|+.||...... .........
T Consensus 155 ~~~~~~~---~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~-~~~~~~~~~----- 225 (332)
T cd07857 155 FSENPGE---NAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYV-DQLNQILQV----- 225 (332)
T ss_pred ccccccc---ccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHH-HHHHHHHHH-----
Confidence 5432211 0111233568899999998866 56899999999999999999999998654432 111111000
Q ss_pred hccCCCCCCChHHHHHHHH----HHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCc
Q 005227 605 VIDGNMGSYPSECVEKFIK----LALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSS 680 (707)
Q Consensus 605 ~~~~~~~~~~~~~~~~l~~----l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e 680 (707)
.+..+.+....+.. ....-....+ ++.+. ...+..+....+|+.+||..||++|+|++|
T Consensus 226 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~----------~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ 288 (332)
T cd07857 226 -----LGTPDEETLSRIGSPKAQNYIRSLPNIP--KKPFE----------SIFPNANPLALDLLEKLLAFDPTKRISVEE 288 (332)
T ss_pred -----hCCCCHHHHHhhhhhhHHHHHHhccccC--CcchH----------hhCCCCCHHHHHHHHHHccCCcccCCCHHH
Confidence 00111111111100 0000000000 00010 112233455678999999999999999999
Q ss_pred CCCCCCCCC
Q 005227 681 MLKHPYVSS 689 (707)
Q Consensus 681 ~L~Hp~f~~ 689 (707)
++.||||..
T Consensus 289 ll~~~~~~~ 297 (332)
T cd07857 289 ALEHPYLAI 297 (332)
T ss_pred HhcChhhhh
Confidence 999999953
No 368
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=1.1e-33 Score=291.82 Aligned_cols=202 Identities=29% Similarity=0.439 Sum_probs=170.7
Q ss_pred cCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccC-----ChhhHHHHHHHHHHHHccCCCcceeEEEEEEeC--CeE
Q 005227 375 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEG-----SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE--GEQ 446 (707)
Q Consensus 375 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~-----~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~--~~~ 446 (707)
.+|++.+.||+|+||.||+|... +++.||+|.+... .......+.+|++++++++|+||+++++++.+. +..
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL 81 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence 47889999999999999999964 6899999987532 122345788999999999999999999998654 468
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccC
Q 005227 447 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 526 (707)
Q Consensus 447 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~ 526 (707)
++|+||+++++|.+++.... .+++...+.++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||+++..
T Consensus 82 ~~v~e~~~~~~L~~~~~~~~--~l~~~~~~~~~~~i~~al~~LH~~~---i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~ 156 (264)
T cd06653 82 SIFVEYMPGGSIKDQLKAYG--ALTENVTRRYTRQILQGVSYLHSNM---IVHRDIKGANILRDSAGNVKLGDFGASKRI 156 (264)
T ss_pred EEEEEeCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCCEEECcccccccc
Confidence 89999999999999986543 4789999999999999999999998 999999999999999999999999999865
Q ss_pred CCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCC
Q 005227 527 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISH 585 (707)
Q Consensus 527 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~ 585 (707)
...... ........++..|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 157 ~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~ 211 (264)
T cd06653 157 QTICMS----GTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAE 211 (264)
T ss_pred cccccc----CccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCc
Confidence 321110 1112234588999999999998899999999999999999999999964
No 369
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=1.5e-33 Score=299.00 Aligned_cols=244 Identities=30% Similarity=0.477 Sum_probs=193.8
Q ss_pred CCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCCh---hhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEec
Q 005227 377 FNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 452 (707)
Q Consensus 377 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~ 452 (707)
|+..+.||+|+||.||+|... ++..||+|.+..... ...+.+.+|++++++++|+|++++++++..++..++||||
T Consensus 27 f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 106 (317)
T cd06635 27 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEY 106 (317)
T ss_pred hhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEeC
Confidence 667889999999999999964 789999999864322 2335788999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCC
Q 005227 453 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 532 (707)
Q Consensus 453 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 532 (707)
++ |+|.+.+... ..++++..+..++.|++.||.|||+.+ |+||||+|+||+++.++.+||+|||++......
T Consensus 107 ~~-g~l~~~~~~~-~~~l~~~~~~~i~~~i~~~l~~lH~~~---i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~--- 178 (317)
T cd06635 107 CL-GSASDLLEVH-KKPLQEVEIAAITHGALQGLAYLHSHN---MIHRDIKAGNILLTEPGQVKLADFGSASIASPA--- 178 (317)
T ss_pred CC-CCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcccEEECCCCCEEEecCCCccccCCc---
Confidence 96 5888877543 345899999999999999999999998 999999999999999999999999998754321
Q ss_pred CccccceecccccCCCccchhhhc---cCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCC
Q 005227 533 GIVPAHVSTVVKGTPGYLDPEYFL---THKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGN 609 (707)
Q Consensus 533 ~~~~~~~~~~~~gt~~y~aPE~~~---~~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 609 (707)
....|+..|+|||++. .+.++.++|||||||++|||++|+.||........... +....
T Consensus 179 --------~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~----------~~~~~ 240 (317)
T cd06635 179 --------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYH----------IAQNE 240 (317)
T ss_pred --------ccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHH----------HHhcc
Confidence 2235788999999984 45788999999999999999999999865432211111 11111
Q ss_pred CC-CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 005227 610 MG-SYPSECVEKFIKLALKCCQDETDARPSMSEVMREL 646 (707)
Q Consensus 610 ~~-~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L 646 (707)
.. .....++..+.+++.+|++.+|.+||++.++++..
T Consensus 241 ~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~ 278 (317)
T cd06635 241 SPTLQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHM 278 (317)
T ss_pred CCCCCCccccHHHHHHHHHHccCCcccCcCHHHHHhCh
Confidence 11 12234556678888888888888888888877644
No 370
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=100.00 E-value=3.4e-36 Score=287.50 Aligned_cols=247 Identities=25% Similarity=0.388 Sum_probs=197.6
Q ss_pred cceEeeeCceEEEEEEeC-CCcEEEEEEeccCCh-hhHHHHHHHHHHHHc-cCCCcceeEEEEEEeCCeEEEEEecCCCC
Q 005227 380 STQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSR-LHHRNLVSLVGYCDEEGEQMLVYEFMSNG 456 (707)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~-l~h~nIv~l~~~~~~~~~~~lV~E~~~~g 456 (707)
...||.|+||+|+|-.++ .|+..|||++..... ...++++.|.+...+ -++||||++||.+..++..|+.||.| .-
T Consensus 69 lg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELM-d~ 147 (361)
T KOG1006|consen 69 LGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELM-DI 147 (361)
T ss_pred HHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHH-hh
Confidence 567999999999999975 799999999987665 445788889886554 47999999999999999999999999 45
Q ss_pred CHHHHHh---hcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCCC
Q 005227 457 TLRDQLS---AKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEG 533 (707)
Q Consensus 457 sL~~~l~---~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 533 (707)
||..+-+ ......+++...-.|+.....||.||-+.. .|||||+||+|||+|..|.+|++|||++-.+..
T Consensus 148 SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~l--kiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~----- 220 (361)
T KOG1006|consen 148 SLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEEL--KIIHRDVKPSNILLDRHGDVKLCDFGICGQLVD----- 220 (361)
T ss_pred hHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHh--hhhhccCChhheEEecCCCEeeecccchHhHHH-----
Confidence 7755443 334456889999999999999999998754 499999999999999999999999999865532
Q ss_pred ccccceecccccCCCccchhhhcc--CCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCCCC
Q 005227 534 IVPAHVSTVVKGTPGYLDPEYFLT--HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 611 (707)
Q Consensus 534 ~~~~~~~~~~~gt~~y~aPE~~~~--~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 611 (707)
+...+.-.|...|||||.+.. ..|+.+|||||+|++|||+.||+.||..+.+..+++...... ++...
T Consensus 221 ---SiAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~Vv~g-------dpp~l 290 (361)
T KOG1006|consen 221 ---SIAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQVVIG-------DPPIL 290 (361)
T ss_pred ---HHHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHHHHHHHHHHcC-------CCCee
Confidence 333445578899999999974 458999999999999999999999998877766665544322 12222
Q ss_pred CCChH---HHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005227 612 SYPSE---CVEKFIKLALKCCQDETDARPSMSEVMR 644 (707)
Q Consensus 612 ~~~~~---~~~~l~~l~~~c~~~~p~~RPt~~~v~~ 644 (707)
.++.+ +...+..++..|+.++-..||.+.++..
T Consensus 291 ~~~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~ 326 (361)
T KOG1006|consen 291 LFDKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKK 326 (361)
T ss_pred cCcccccccCHHHHHHHHHHhhcccccCcchhhhhc
Confidence 23333 5677888888888888888888877754
No 371
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-35 Score=295.86 Aligned_cols=205 Identities=23% Similarity=0.407 Sum_probs=175.1
Q ss_pred HHhcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCChhhHHH---HHHHHHHHHcc-CCCcceeEEEEEEeCCeE
Q 005227 372 LATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKE---FLTEIQFLSRL-HHRNLVSLVGYCDEEGEQ 446 (707)
Q Consensus 372 ~~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~---~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~ 446 (707)
....+|....+||+|+||.|-+|..+ +.+.+|||+++..-.....+ -+.|-++|... +-|.++++..+|+.-+.+
T Consensus 346 i~~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRL 425 (683)
T KOG0696|consen 346 IKATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRL 425 (683)
T ss_pred eeecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhhe
Confidence 33457888999999999999999976 56889999998654332222 24566666665 578999999999999999
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccC
Q 005227 447 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 526 (707)
Q Consensus 447 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~ 526 (707)
|+||||+.||+|-..+++-+ .+.+..+..+|..||-||-|||+++ ||.||||.+|||+|.+|++||+|||+++.
T Consensus 426 yFVMEyvnGGDLMyhiQQ~G--kFKEp~AvFYAaEiaigLFFLh~kg---IiYRDLKLDNvmLd~eGHiKi~DFGmcKE- 499 (683)
T KOG0696|consen 426 YFVMEYVNGGDLMYHIQQVG--KFKEPVAVFYAAEIAIGLFFLHSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKE- 499 (683)
T ss_pred eeEEEEecCchhhhHHHHhc--ccCCchhhhhhHHHHHHhhhhhcCC---eeeeeccccceEeccCCceEeeecccccc-
Confidence 99999999999999887654 3788889999999999999999999 99999999999999999999999999974
Q ss_pred CCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCch
Q 005227 527 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKN 588 (707)
Q Consensus 527 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~~~ 588 (707)
...........+||+.|+|||++..++|+.++|+|||||+||||+.|+.||+..++
T Consensus 500 ------ni~~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE 555 (683)
T KOG0696|consen 500 ------NIFDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDE 555 (683)
T ss_pred ------cccCCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCH
Confidence 23334566778999999999999999999999999999999999999999976543
No 372
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-36 Score=291.25 Aligned_cols=284 Identities=24% Similarity=0.346 Sum_probs=214.5
Q ss_pred CccceEeeeCceEEEEEEeC-CCcEEEEEEeccC--ChhhHHHHHHHHHHHHccCCCcceeEEEEEEeC-----CeEEEE
Q 005227 378 NSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEG--SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE-----GEQMLV 449 (707)
Q Consensus 378 ~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~-----~~~~lV 449 (707)
+-.+.||.|+||.||...++ +|+.||.|++... +....+.+.+|+++|..++|.|++..++..... .++|+|
T Consensus 56 ~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~ 135 (449)
T KOG0664|consen 56 QPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVL 135 (449)
T ss_pred CCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHH
Confidence 34678999999999999964 8999999998652 334457899999999999999999998887544 357888
Q ss_pred EecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCC
Q 005227 450 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 529 (707)
Q Consensus 450 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~ 529 (707)
+|.|. .+|...+ -+.+.++.+.++-+.+||++||+|||+.+ |.||||||.|.|++++...||+|||+|+..+..
T Consensus 136 TELmQ-SDLHKII--VSPQ~Ls~DHvKVFlYQILRGLKYLHsA~---ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d 209 (449)
T KOG0664|consen 136 TELMQ-SDLHKII--VSPQALTPDHVKVFVYQILRGLKYLHTAN---ILHRDIKPGNLLVNSNCILKICDFGLARTWDQR 209 (449)
T ss_pred HHHHH-hhhhhee--ccCCCCCcchhhhhHHHHHhhhHHHhhcc---hhhccCCCccEEeccCceEEecccccccccchh
Confidence 99984 4787777 45667999999999999999999999999 999999999999999999999999999986554
Q ss_pred CCCCccccceecccccCCCccchhhhcc-CCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccC
Q 005227 530 DIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDG 608 (707)
Q Consensus 530 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 608 (707)
+ ....+...-|..|+|||++++ ..|+.+.||||.||++.|++.++-.|..... .+++..+ ..
T Consensus 210 ~------~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~P-iqQL~lI----------td 272 (449)
T KOG0664|consen 210 D------RLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGP-IEQLQMI----------ID 272 (449)
T ss_pred h------hhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccCh-HHHHHHH----------HH
Confidence 3 223344556889999999998 5799999999999999999988877754333 3333221 12
Q ss_pred CCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCCCCCCCC
Q 005227 609 NMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVS 688 (707)
Q Consensus 609 ~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f~ 688 (707)
.++....+.+..-.+-++.-+-..+.+-|+..-+.. |. .......+..+++.+||..||++|++.++++.|+|..
T Consensus 273 LLGTPs~EaMr~ACEGAk~H~LR~~~k~Ps~~vLYt-ls----S~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~~~ 347 (449)
T KOG0664|consen 273 LLGTPSQEAMKYACEGAKNHVLRAGLRAPDTQRLYK-IA----SPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRYLE 347 (449)
T ss_pred HhCCCcHHHHHHHhhhhHHHhhccCCCCCCccceee-ec----CCcccchHHHHHHHHHhCCCCcccccHhhhccccccc
Confidence 233334444444444444444444445555543221 10 1112233456789999999999999999999999975
Q ss_pred C
Q 005227 689 S 689 (707)
Q Consensus 689 ~ 689 (707)
.
T Consensus 348 e 348 (449)
T KOG0664|consen 348 E 348 (449)
T ss_pred c
Confidence 4
No 373
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=100.00 E-value=3.7e-34 Score=292.37 Aligned_cols=192 Identities=31% Similarity=0.429 Sum_probs=168.0
Q ss_pred EeeeCceEEEEEEeC-CCcEEEEEEeccCChh---hHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEecCCCCCH
Q 005227 383 IGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ---GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTL 458 (707)
Q Consensus 383 lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~---~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL 458 (707)
||+|+||.||++... +++.||+|.+...... ....+..|+++++.++|+||+++++.+..++..++||||+++++|
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 689999999999975 5899999998764332 345788999999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCCCccccc
Q 005227 459 RDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAH 538 (707)
Q Consensus 459 ~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~ 538 (707)
.+++.... .+++..+..++.|+++||.|||+.+ ++|+||+|+||++++++.++|+|||++....... .
T Consensus 81 ~~~l~~~~--~l~~~~~~~~~~qi~~~l~~lh~~~---~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~-------~ 148 (250)
T cd05123 81 FSHLSKEG--RFSEERARFYAAEIVLALEYLHSLG---IIYRDLKPENILLDADGHIKLTDFGLAKELSSEG-------S 148 (250)
T ss_pred HHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCcceEEEcCCCcEEEeecCcceecccCC-------C
Confidence 99996543 5899999999999999999999988 9999999999999999999999999997654321 1
Q ss_pred eecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCC
Q 005227 539 VSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 586 (707)
Q Consensus 539 ~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~ 586 (707)
......++..|+|||...+..++.++|+||||+++||+++|+.||...
T Consensus 149 ~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~ 196 (250)
T cd05123 149 RTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAE 196 (250)
T ss_pred cccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCC
Confidence 223455788999999999888999999999999999999999999643
No 374
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00 E-value=1.6e-33 Score=295.71 Aligned_cols=199 Identities=29% Similarity=0.459 Sum_probs=166.1
Q ss_pred hcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCCh-hhHHHHHHHHHHHHccC-CCcceeEEEEEEeCCeEEEEE
Q 005227 374 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLH-HRNLVSLVGYCDEEGEQMLVY 450 (707)
Q Consensus 374 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~~lV~ 450 (707)
.++|++.+.||+|+||.||+|..+ +++.||||.+..... .....+..|+.++.+.. |+||+++++++.+....++||
T Consensus 14 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~ 93 (296)
T cd06618 14 LNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICM 93 (296)
T ss_pred cchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEe
Confidence 456888999999999999999986 489999999875432 23456777887777764 999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHh-CCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCC
Q 005227 451 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHT-EADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 529 (707)
Q Consensus 451 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~ 529 (707)
||++ +++.+++.... ..+++..+..++.|+++||+|||+ .+ |+||||+|+||++++++.+||+|||++......
T Consensus 94 e~~~-~~l~~l~~~~~-~~l~~~~~~~i~~~i~~~l~~lH~~~~---i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~ 168 (296)
T cd06618 94 ELMS-TCLDKLLKRIQ-GPIPEDILGKMTVAIVKALHYLKEKHG---VIHRDVKPSNILLDASGNVKLCDFGISGRLVDS 168 (296)
T ss_pred eccC-cCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhhCC---EecCCCcHHHEEEcCCCCEEECccccchhccCC
Confidence 9985 57877775533 368999999999999999999997 46 999999999999999999999999998765321
Q ss_pred CCCCccccceecccccCCCccchhhhccCC----CCCchhhHHHHHHHHHHHcCCCCCCC
Q 005227 530 DIEGIVPAHVSTVVKGTPGYLDPEYFLTHK----LTDKSDVYSLGVVFLELLTGMQPISH 585 (707)
Q Consensus 530 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~s~~sDVwSlGvll~elltG~~pf~~ 585 (707)
. ......++..|+|||.+.+.. ++.++||||||+++|||++|+.||..
T Consensus 169 ~--------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~ 220 (296)
T cd06618 169 K--------AKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKN 220 (296)
T ss_pred C--------cccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCc
Confidence 1 112234778999999997654 78899999999999999999999964
No 375
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=100.00 E-value=7.5e-34 Score=328.40 Aligned_cols=146 Identities=25% Similarity=0.378 Sum_probs=131.5
Q ss_pred cCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCCh---hhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEE
Q 005227 375 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 450 (707)
Q Consensus 375 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~ 450 (707)
++|.+.++||+|+||+||+|... +++.||||++..... .....+.+|+.+++.++|+||+++++++......++||
T Consensus 4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVm 83 (669)
T cd05610 4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVM 83 (669)
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEE
Confidence 57889999999999999999975 789999999875332 22357889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeeccccc
Q 005227 451 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRL 525 (707)
Q Consensus 451 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~ 525 (707)
||+++++|.+++... ..+++..++.++.||+.||+|||..+ |+||||||+|||++.++.+||+|||+++.
T Consensus 84 Ey~~g~~L~~li~~~--~~l~~~~~~~i~~qil~aL~yLH~~g---IiHrDLKP~NILl~~~g~vkL~DFGls~~ 153 (669)
T cd05610 84 EYLIGGDVKSLLHIY--GYFDEEMAVKYISEVALALDYLHRHG---IIHRDLKPDNMLISNEGHIKLTDFGLSKV 153 (669)
T ss_pred eCCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCccHHHEEEcCCCCEEEEeCCCCcc
Confidence 999999999999654 34888999999999999999999998 99999999999999999999999999863
No 376
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=100.00 E-value=3.7e-34 Score=314.93 Aligned_cols=271 Identities=20% Similarity=0.312 Sum_probs=187.0
Q ss_pred HhcCCCccceEeeeCceEEEEEEe-----------------CCCcEEEEEEeccCChhhHHH--------------HHHH
Q 005227 373 ATNNFNSSTQIGQGGYGKVYKGIL-----------------PDGTVVAVKRAQEGSLQGEKE--------------FLTE 421 (707)
Q Consensus 373 ~~~~~~~~~~lG~G~fg~Vy~~~~-----------------~~~~~vavK~l~~~~~~~~~~--------------~~~E 421 (707)
..++|++.++||+|+||+||+|.+ .+++.||||++........++ ...|
T Consensus 143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE 222 (507)
T PLN03224 143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE 222 (507)
T ss_pred cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence 467899999999999999999964 245789999987543322223 3346
Q ss_pred HHHHHccCCCcc-----eeEEEEEEe--------CCeEEEEEecCCCCCHHHHHhhcC----------------------
Q 005227 422 IQFLSRLHHRNL-----VSLVGYCDE--------EGEQMLVYEFMSNGTLRDQLSAKS---------------------- 466 (707)
Q Consensus 422 ~~~l~~l~h~nI-----v~l~~~~~~--------~~~~~lV~E~~~~gsL~~~l~~~~---------------------- 466 (707)
+.++.+++|.++ ++++++|.. .+..++||||+++++|.++++...
T Consensus 223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~ 302 (507)
T PLN03224 223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP 302 (507)
T ss_pred HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence 777777766554 677787743 356899999999999999987421
Q ss_pred CCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCCCccccceecccccC
Q 005227 467 KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGT 546 (707)
Q Consensus 467 ~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt 546 (707)
...+++..++.++.|+++||.|||+.+ |+||||||+|||++.++.+||+|||+++...... ........++
T Consensus 303 ~~~~~~~~~~~i~~ql~~aL~~lH~~~---ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~------~~~~~~g~~t 373 (507)
T PLN03224 303 QDKRDINVIKGVMRQVLTGLRKLHRIG---IVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGI------NFNPLYGMLD 373 (507)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCchHhEEECCCCcEEEEeCcCccccccCC------ccCccccCCC
Confidence 123467888999999999999999998 9999999999999999999999999997543211 0111122347
Q ss_pred CCccchhhhccCC--------------------C--CCchhhHHHHHHHHHHHcCCC-CCCCCchhHHHHHHHhhcccch
Q 005227 547 PGYLDPEYFLTHK--------------------L--TDKSDVYSLGVVFLELLTGMQ-PISHGKNIVREVNIAYQSSMMF 603 (707)
Q Consensus 547 ~~y~aPE~~~~~~--------------------~--s~~sDVwSlGvll~elltG~~-pf~~~~~~~~~~~~~~~~~~~~ 603 (707)
+.|+|||.+.... + ..+.||||+||+++||++|.. ||............
T Consensus 374 p~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~-------- 445 (507)
T PLN03224 374 PRYSPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQ-------- 445 (507)
T ss_pred cceeChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhh--------
Confidence 8999999986422 1 124799999999999999875 66422111110000
Q ss_pred hhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCC---CCCCCCCc
Q 005227 604 SVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKE---ETPPSSSS 680 (707)
Q Consensus 604 ~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP---~~R~sa~e 680 (707)
+. ..... |......+..+. .+...+....||+.+||+.+| .+|+|++|
T Consensus 446 ---------~~-~~~~~--------~r~~~~~~~~~~-----------~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~e 496 (507)
T PLN03224 446 ---------YD-NDLNR--------WRMYKGQKYDFS-----------LLDRNKEAGWDLACKLITKRDQANRGRLSVGQ 496 (507)
T ss_pred ---------cc-chHHH--------HHhhcccCCCcc-----------cccccChHHHHHHHHHhccCCCCcccCCCHHH
Confidence 00 00000 111111111111 122334556789999999766 78999999
Q ss_pred CCCCCCCCC
Q 005227 681 MLKHPYVSS 689 (707)
Q Consensus 681 ~L~Hp~f~~ 689 (707)
+|+||||..
T Consensus 497 aL~Hp~f~~ 505 (507)
T PLN03224 497 ALSHRFFLP 505 (507)
T ss_pred HhCCCCcCC
Confidence 999999964
No 377
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-35 Score=301.03 Aligned_cols=276 Identities=24% Similarity=0.382 Sum_probs=211.8
Q ss_pred HHHhcCCCccceEeeeCceEEEEEE-eCCCcEEEEEEeccCC-hhh------HHHHHHHHHHHHccCCCcceeEEEEEE-
Q 005227 371 ALATNNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGS-LQG------EKEFLTEIQFLSRLHHRNLVSLVGYCD- 441 (707)
Q Consensus 371 ~~~~~~~~~~~~lG~G~fg~Vy~~~-~~~~~~vavK~l~~~~-~~~------~~~~~~E~~~l~~l~h~nIv~l~~~~~- 441 (707)
....++|-.++.||+|+|+.||+|. +...+.||||+-.... +.+ .+...+|.++-+.+.||.||++|+||.
T Consensus 459 ptLn~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfsl 538 (775)
T KOG1151|consen 459 PTLNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSL 538 (775)
T ss_pred cchHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeee
Confidence 3445678888999999999999999 5578999999865432 222 245778999999999999999999995
Q ss_pred eCCeEEEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEc---CCCcEEEe
Q 005227 442 EEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLD---HKFTAKVA 518 (707)
Q Consensus 442 ~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~---~~~~~kl~ 518 (707)
+.+..|-|+|||+|.+|+-+|+.+. .+++.+++.|+.||+.||.||.+. ++||||-||||.|||+. ..|.+||+
T Consensus 539 DtdsFCTVLEYceGNDLDFYLKQhk--lmSEKEARSIiMQiVnAL~YLNEi-kpPIIHYDLKPgNILLv~GtacGeIKIT 615 (775)
T KOG1151|consen 539 DTDSFCTVLEYCEGNDLDFYLKQHK--LMSEKEARSIIMQIVNALKYLNEI-KPPIIHYDLKPGNILLVNGTACGEIKIT 615 (775)
T ss_pred ccccceeeeeecCCCchhHHHHhhh--hhhHHHHHHHHHHHHHHHHHHhcc-CCCeeeeccCCccEEEecCcccceeEee
Confidence 4567899999999999999997643 489999999999999999999987 58899999999999995 45889999
Q ss_pred eecccccCCCCCCCCccccceecccccCCCccchhhhcc----CCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHH
Q 005227 519 DFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT----HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVN 594 (707)
Q Consensus 519 DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~ 594 (707)
|||+++.+....+.....-....-..||.+|.+||.+.- .+++.|+||||+||++|.++.|+.||.......+.+.
T Consensus 616 DFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdILq 695 (775)
T KOG1151|consen 616 DFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDILQ 695 (775)
T ss_pred ecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHHHh
Confidence 999999987655443333444556789999999999863 3578899999999999999999999975443211111
Q ss_pred HHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCC
Q 005227 595 IAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEET 674 (707)
Q Consensus 595 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~ 674 (707)
...+. ...-.. +..-|..+..+.+||++||.+.-++
T Consensus 696 ----eNTIl---kAtEVq-------------------------------------FP~KPvVsseAkaFIRRCLaYRKeD 731 (775)
T KOG1151|consen 696 ----ENTIL---KATEVQ-------------------------------------FPPKPVVSSEAKAFIRRCLAYRKED 731 (775)
T ss_pred ----hhchh---cceecc-------------------------------------CCCCCccCHHHHHHHHHHHHhhhhh
Confidence 00000 000000 0111233445568999999999999
Q ss_pred CCCCCcCCCCCCCCCCCCC
Q 005227 675 PPSSSSMLKHPYVSSDVSG 693 (707)
Q Consensus 675 R~sa~e~L~Hp~f~~~~~~ 693 (707)
|+...++-.||||.-.+..
T Consensus 732 R~DV~qLA~dpyllPh~rr 750 (775)
T KOG1151|consen 732 RIDVQQLACDPYLLPHIRR 750 (775)
T ss_pred hhhHHHHccCccccchhhh
Confidence 9999999999998655443
No 378
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.4e-34 Score=307.21 Aligned_cols=257 Identities=24% Similarity=0.364 Sum_probs=209.1
Q ss_pred hcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCChhh--HHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEE
Q 005227 374 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQG--EKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 450 (707)
Q Consensus 374 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~--~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~ 450 (707)
...|.+...||+|.|+.|..|++. ++..||||.+.+..... ...+.+|+++|..+.|||||+++.+...+...|+||
T Consensus 55 vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV~ 134 (596)
T KOG0586|consen 55 VGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLVM 134 (596)
T ss_pred ccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEEE
Confidence 457888999999999999999965 79999999988754332 345889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCC
Q 005227 451 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 530 (707)
Q Consensus 451 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~ 530 (707)
||+.+|.+.+++..+++ ..+..+..++.|+.+|++|||+++ |||||||++|||++.++++||+|||++..+..
T Consensus 135 eya~~ge~~~yl~~~gr--~~e~~ar~~F~q~vsaveYcH~k~---ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~-- 207 (596)
T KOG0586|consen 135 EYASGGELFDYLVKHGR--MKEKEARAKFRQIVSAVEYCHSKN---IVHRDLKAENILLDENMNIKIADFGFSTFFDY-- 207 (596)
T ss_pred EeccCchhHHHHHhccc--chhhhhhhhhHHHHHHHHHHhhcc---eeccccchhhcccccccceeeeccccceeecc--
Confidence 99999999999987765 455888899999999999999999 99999999999999999999999999988753
Q ss_pred CCCccccceecccccCCCccchhhhccCCCC-CchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCC
Q 005227 531 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKLT-DKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGN 609 (707)
Q Consensus 531 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s-~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 609 (707)
.......+|++.|.|||++.+..|. +++|+||+|+++|-|+.|..||+...-.
T Consensus 208 ------~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk-------------------- 261 (596)
T KOG0586|consen 208 ------GLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLK-------------------- 261 (596)
T ss_pred ------cccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccc--------------------
Confidence 3345667899999999999997764 6899999999999999999999743210
Q ss_pred CCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCCCCCCCCC
Q 005227 610 MGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSS 689 (707)
Q Consensus 610 ~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f~~ 689 (707)
++-.+|+... ....--...+..++|+++|..+|.+|++.++++.|+|...
T Consensus 262 -------------~Lr~rvl~gk-----------------~rIp~~ms~dce~lLrk~lvl~Pskr~~~dqim~~~W~n~ 311 (596)
T KOG0586|consen 262 -------------ELRPRVLRGK-----------------YRIPFYMSCDCEDLLRKFLVLNPSKRGPCDQIMKDRWRND 311 (596)
T ss_pred -------------cccchheeee-----------------ecccceeechhHHHHHHhhccCccccCCHHHhhhhcccch
Confidence 0000011000 0000111233447888899999999999999999999876
Q ss_pred CCCC
Q 005227 690 DVSG 693 (707)
Q Consensus 690 ~~~~ 693 (707)
.-..
T Consensus 312 ~~~~ 315 (596)
T KOG0586|consen 312 LLEA 315 (596)
T ss_pred hhhh
Confidence 5554
No 379
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=100.00 E-value=3e-35 Score=275.13 Aligned_cols=278 Identities=16% Similarity=0.343 Sum_probs=210.4
Q ss_pred hcCCCccceEeeeCceEEEEEE-eCCCcEEEEEEeccCChhhHHHHHHHHHHHHccC-CCcceeEEEEEEeC--CeEEEE
Q 005227 374 TNNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLH-HRNLVSLVGYCDEE--GEQMLV 449 (707)
Q Consensus 374 ~~~~~~~~~lG~G~fg~Vy~~~-~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~--~~~~lV 449 (707)
.++|++.+++|+|.++.||.|. ..+.+.++||+++. ...+.+.+|+++|+.++ ||||+++++...+. ....||
T Consensus 37 ~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKP---VkkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLi 113 (338)
T KOG0668|consen 37 QDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKP---VKKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLI 113 (338)
T ss_pred cchHHHHHHHcCccHhhHhcccccCCCceEEEeeech---HHHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhH
Confidence 4678899999999999999999 56789999999975 34568899999999996 99999999998665 457899
Q ss_pred EecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCC-CcEEEeeecccccCCC
Q 005227 450 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHK-FTAKVADFGLSRLAPV 528 (707)
Q Consensus 450 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~-~~~kl~DFGla~~~~~ 528 (707)
+||+.+-+...+- +.++...++.++.++++||.|+|+.| |.|||+||.||++|.. ...+++|+|+|.++.+
T Consensus 114 FE~v~n~Dfk~ly-----~tl~d~dIryY~~elLkALdyCHS~G---ImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp 185 (338)
T KOG0668|consen 114 FEYVNNTDFKQLY-----PTLTDYDIRYYIYELLKALDYCHSMG---IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHP 185 (338)
T ss_pred hhhhccccHHHHh-----hhhchhhHHHHHHHHHHHHhHHHhcC---cccccCCcceeeechhhceeeeeecchHhhcCC
Confidence 9999988776654 23777888999999999999999999 9999999999999954 5799999999998765
Q ss_pred CCCCCccccceecccccCCCccchhhhcc-CCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcc---cchh
Q 005227 529 PDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSS---MMFS 604 (707)
Q Consensus 529 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~---~~~~ 604 (707)
.. .......+..|.-||.+.. +.|+.+-|+|||||++.+|+..+.||..+.+-.+++..+...- .+..
T Consensus 186 ~~--------eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~ 257 (338)
T KOG0668|consen 186 GK--------EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYA 257 (338)
T ss_pred Cc--------eeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHH
Confidence 32 2233445678899999976 6789999999999999999999999998877555544322111 1111
Q ss_pred hccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH-HHhhhcCC------CCCCCCCccccCCCCCCCCCCCC
Q 005227 605 VIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMREL-ESIWNMMP------ESDTKTPEFINSEHTSKEETPPS 677 (707)
Q Consensus 605 ~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L-~~~~~~~~------~~~~~~~dll~~~L~~dP~~R~s 677 (707)
.+.+ .-+..+ |.+.+++..- ...|..+. -..+++.||+.++|.+|-.+|+|
T Consensus 258 Yl~K------------------Y~i~Ld----p~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlT 315 (338)
T KOG0668|consen 258 YLNK------------------YQIDLD----PQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLT 315 (338)
T ss_pred HHHH------------------HccCCC----hhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccc
Confidence 1111 111111 2222222111 11111111 12467789999999999999999
Q ss_pred CCcCCCCCCCCCCCC
Q 005227 678 SSSMLKHPYVSSDVS 692 (707)
Q Consensus 678 a~e~L~Hp~f~~~~~ 692 (707)
|+||+.||||..-..
T Consensus 316 akEam~HpyF~~~~~ 330 (338)
T KOG0668|consen 316 AKEAMAHPYFAPVRE 330 (338)
T ss_pred hHHHhcCchHHHHHH
Confidence 999999999975443
No 380
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=100.00 E-value=1.1e-33 Score=295.79 Aligned_cols=198 Identities=28% Similarity=0.356 Sum_probs=168.6
Q ss_pred CCCccceEeeeCceEEEEEEe----CCCcEEEEEEeccCCh----hhHHHHHHHHHHHHcc-CCCcceeEEEEEEeCCeE
Q 005227 376 NFNSSTQIGQGGYGKVYKGIL----PDGTVVAVKRAQEGSL----QGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQ 446 (707)
Q Consensus 376 ~~~~~~~lG~G~fg~Vy~~~~----~~~~~vavK~l~~~~~----~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~ 446 (707)
+|++.+.||+|+||.||++.. .+++.||||.+..... ...+.+.+|+++++++ +|+||+++++.+......
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~ 80 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL 80 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence 477889999999999999984 3578899999875322 2235688999999999 599999999999999999
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccC
Q 005227 447 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 526 (707)
Q Consensus 447 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~ 526 (707)
++||||+++++|.+++... ..+++..+..++.|+++||+|||+.+ ++||||||+||+++.++.++|+|||+++..
T Consensus 81 ~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~ql~~~l~~lH~~~---~~H~dl~p~nil~~~~~~~~l~dfg~~~~~ 155 (288)
T cd05583 81 HLILDYVNGGELFTHLYQR--EHFTESEVRVYIAEIVLALDHLHQLG---IIYRDIKLENILLDSEGHVVLTDFGLSKEF 155 (288)
T ss_pred EEEEecCCCCcHHHHHhhc--CCcCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCCCCEEEEECcccccc
Confidence 9999999999999998653 35889999999999999999999988 999999999999999999999999998765
Q ss_pred CCCCCCCccccceecccccCCCccchhhhccCC--CCCchhhHHHHHHHHHHHcCCCCCC
Q 005227 527 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHK--LTDKSDVYSLGVVFLELLTGMQPIS 584 (707)
Q Consensus 527 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~s~~sDVwSlGvll~elltG~~pf~ 584 (707)
.... ........|+..|+|||.+.+.. .+.++||||||+++|||++|..||.
T Consensus 156 ~~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~ 209 (288)
T cd05583 156 LAEE------EERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFT 209 (288)
T ss_pred cccc------ccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcc
Confidence 4322 11122345788999999987755 7889999999999999999999985
No 381
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=3.4e-34 Score=322.53 Aligned_cols=257 Identities=25% Similarity=0.342 Sum_probs=189.3
Q ss_pred HHhcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCC-hhhHHHHHHHHHHHHccCCCcceeEEEEEEe-------
Q 005227 372 LATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE------- 442 (707)
Q Consensus 372 ~~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~------- 442 (707)
.-..+|+..+.||+||||.||+++-+ ||+.||||++.... ...-..+.+|++.+++++|||||+++..+.+
T Consensus 476 RY~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~ 555 (1351)
T KOG1035|consen 476 RYLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTV 555 (1351)
T ss_pred hHhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCcccc
Confidence 34567888999999999999999976 99999999987653 2223578999999999999999998832200
Q ss_pred --------------------------------------------------------------------------------
Q 005227 443 -------------------------------------------------------------------------------- 442 (707)
Q Consensus 443 -------------------------------------------------------------------------------- 442 (707)
T Consensus 556 ~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~ 635 (1351)
T KOG1035|consen 556 LEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSD 635 (1351)
T ss_pred ccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccc
Confidence
Q ss_pred ------------------------C--------CeEEEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHH
Q 005227 443 ------------------------E--------GEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLH 490 (707)
Q Consensus 443 ------------------------~--------~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH 490 (707)
+ ...||-||||+..++.++++++... -.....|+++.+|++||+|+|
T Consensus 636 ~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~-~~~d~~wrLFreIlEGLaYIH 714 (1351)
T KOG1035|consen 636 SEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFN-SQRDEAWRLFREILEGLAYIH 714 (1351)
T ss_pred cCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccc-hhhHHHHHHHHHHHHHHHHHH
Confidence 0 1247889999998888888765422 157788999999999999999
Q ss_pred hCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCC----CC-------CCCCccccceecccccCCCccchhhhccC-
Q 005227 491 TEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAP----VP-------DIEGIVPAHVSTVVKGTPGYLDPEYFLTH- 558 (707)
Q Consensus 491 ~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~----~~-------~~~~~~~~~~~~~~~gt~~y~aPE~~~~~- 558 (707)
+.+ ||||||||.||++|++..|||+|||+|+... .. +..........+..+||.-|+|||++.+.
T Consensus 715 ~~g---iIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~ 791 (1351)
T KOG1035|consen 715 DQG---IIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTS 791 (1351)
T ss_pred hCc---eeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccc
Confidence 999 9999999999999999999999999998722 00 00111122245677899999999999874
Q ss_pred --CCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCCCCC---CChHHHHHHHHHHHHhcccCC
Q 005227 559 --KLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGS---YPSECVEKFIKLALKCCQDET 633 (707)
Q Consensus 559 --~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~l~~~c~~~~p 633 (707)
.|+.|+||||+|+|++||+ .||....+-... +..+-++.++. +..+....-.+++.++++.||
T Consensus 792 ~~~Yn~KiDmYSLGIVlFEM~---yPF~TsMERa~i---------L~~LR~g~iP~~~~f~~~~~~~e~slI~~Ll~hdP 859 (1351)
T KOG1035|consen 792 SNKYNSKIDMYSLGIVLFEML---YPFGTSMERASI---------LTNLRKGSIPEPADFFDPEHPEEASLIRWLLSHDP 859 (1351)
T ss_pred cccccchhhhHHHHHHHHHHh---ccCCchHHHHHH---------HHhcccCCCCCCcccccccchHHHHHHHHHhcCCC
Confidence 5999999999999999999 467544332211 12222222222 233334444566677777777
Q ss_pred CCCCCHHHHHH
Q 005227 634 DARPSMSEVMR 644 (707)
Q Consensus 634 ~~RPt~~~v~~ 644 (707)
.+|||+.|++.
T Consensus 860 ~kRPtA~eLL~ 870 (1351)
T KOG1035|consen 860 SKRPTATELLN 870 (1351)
T ss_pred ccCCCHHHHhh
Confidence 77777766653
No 382
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=100.00 E-value=2.6e-34 Score=324.16 Aligned_cols=277 Identities=23% Similarity=0.317 Sum_probs=178.0
Q ss_pred HhcCCCccceEeeeCceEEEEEEeC-C----CcEEEEEEeccCChhhHHHHHHHHHHHHccCCCcceeEEEE------EE
Q 005227 373 ATNNFNSSTQIGQGGYGKVYKGILP-D----GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGY------CD 441 (707)
Q Consensus 373 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~----~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~------~~ 441 (707)
..++|+..+.||+|+||.||+|.+. + +..||||++...... +....| .++...+.++..++.. +.
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~~--e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~ 205 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGAV--EIWMNE--RVRRACPNSCADFVYGFLEPVSSK 205 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccchh--HHHHHH--HHHhhchhhHHHHHHhhhcccccc
Confidence 5678999999999999999999975 4 789999987643211 111111 1122222222222211 24
Q ss_pred eCCeEEEEEecCCCCCHHHHHhhcCCC------------------CcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCC
Q 005227 442 EEGEQMLVYEFMSNGTLRDQLSAKSKE------------------PLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIK 503 (707)
Q Consensus 442 ~~~~~~lV~E~~~~gsL~~~l~~~~~~------------------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk 503 (707)
.....++||||+++++|.+++...... ......+..++.|++.||+|||+.+ |+|||||
T Consensus 206 ~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~g---IiHRDLK 282 (566)
T PLN03225 206 KEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTG---IVHRDVK 282 (566)
T ss_pred cCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCC---EEeCcCC
Confidence 566899999999999999998753211 1123446689999999999999998 9999999
Q ss_pred CCCEEEcC-CCcEEEeeecccccCCCCCCCCccccceecccccCCCccchhhhccC----------------------CC
Q 005227 504 ASNILLDH-KFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTH----------------------KL 560 (707)
Q Consensus 504 p~NILl~~-~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----------------------~~ 560 (707)
|+|||+++ ++.+||+|||+|+...... ........+++.|+|||.+... .+
T Consensus 283 P~NILl~~~~~~~KL~DFGlA~~l~~~~------~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~ 356 (566)
T PLN03225 283 PQNIIFSEGSGSFKIIDLGAAADLRVGI------NYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNL 356 (566)
T ss_pred HHHEEEeCCCCcEEEEeCCCcccccccc------ccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccC
Confidence 99999986 5899999999998653221 1222345688999999976422 23
Q ss_pred CCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHH
Q 005227 561 TDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMS 640 (707)
Q Consensus 561 s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~ 640 (707)
+.++|||||||++|||+++..++.. +... ........ .... ..+.+. ..+..++...
T Consensus 357 ~~k~DVwSlGviL~el~~~~~~~~~--~~~~-~~~~l~~~-----------~~~~---~~~~~~------~~~~~~~~~~ 413 (566)
T PLN03225 357 PDRFDIYSAGLIFLQMAFPNLRSDS--NLIQ-FNRQLKRN-----------DYDL---VAWRKL------VEPRASPDLR 413 (566)
T ss_pred CCCcccHHHHHHHHHHHhCcCCCch--HHHH-HHHHHHhc-----------CCcH---HHHHHh------hccccchhhh
Confidence 4467999999999999987655431 1111 11110000 0000 001000 0111112211
Q ss_pred HHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCCCCCCCCCCCC
Q 005227 641 EVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSSDVS 692 (707)
Q Consensus 641 ~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f~~~~~ 692 (707)
+.. ...........|||.+||+.||++|||++|+|+||||.+...
T Consensus 414 ~~~-------~~~d~~~~~~~dLi~~mL~~dP~kR~ta~e~L~Hpff~~~~~ 458 (566)
T PLN03225 414 RGF-------EVLDLDGGAGWELLKSMMRFKGRQRISAKAALAHPYFDREGL 458 (566)
T ss_pred hhh-------hhccccchHHHHHHHHHccCCcccCCCHHHHhCCcCcCCCCc
Confidence 111 111112223458999999999999999999999999987554
No 383
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=100.00 E-value=4.2e-33 Score=294.37 Aligned_cols=195 Identities=32% Similarity=0.516 Sum_probs=166.2
Q ss_pred CCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccC---ChhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEe
Q 005227 376 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEG---SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 451 (707)
Q Consensus 376 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E 451 (707)
.|+..+.||+|+||.||+|+.. +++.||+|.+... .....+++.+|+++++.++|+|++++++++......++|||
T Consensus 16 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 95 (308)
T cd06634 16 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVME 95 (308)
T ss_pred HHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEEE
Confidence 4667788999999999999965 6889999988642 22234568899999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCC
Q 005227 452 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 531 (707)
Q Consensus 452 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 531 (707)
|+. |++.+++... ...+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||++......
T Consensus 96 ~~~-~~l~~~~~~~-~~~l~~~~~~~~~~~l~~~l~~LH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~-- 168 (308)
T cd06634 96 YCL-GSASDLLEVH-KKPLQEVEIAAVTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA-- 168 (308)
T ss_pred ccC-CCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHhEEECCCCcEEECCcccceeecCc--
Confidence 996 6888877543 345899999999999999999999998 999999999999999999999999998764321
Q ss_pred CCccccceecccccCCCccchhhhc---cCCCCCchhhHHHHHHHHHHHcCCCCCCCC
Q 005227 532 EGIVPAHVSTVVKGTPGYLDPEYFL---THKLTDKSDVYSLGVVFLELLTGMQPISHG 586 (707)
Q Consensus 532 ~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~s~~sDVwSlGvll~elltG~~pf~~~ 586 (707)
....++..|+|||.+. ...++.++|||||||++|||++|+.||...
T Consensus 169 ---------~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~ 217 (308)
T cd06634 169 ---------NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNM 217 (308)
T ss_pred ---------ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccc
Confidence 1235788999999985 356788999999999999999999998643
No 384
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=5.6e-34 Score=311.66 Aligned_cols=259 Identities=27% Similarity=0.428 Sum_probs=207.4
Q ss_pred ccHHHHHHHhcCCCccceEeeeCceEEEEEE-eCCCcEEEEEEeccCChhhHHHHHHHHHHHHcc-CCCcceeEEEEEEe
Q 005227 365 FTYGEMALATNNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDE 442 (707)
Q Consensus 365 ~~~~~l~~~~~~~~~~~~lG~G~fg~Vy~~~-~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~ 442 (707)
..++.+...++.|++.+.||.|.+|.||+++ .++++.+|+|++..... .++++..|.++++.. .|||++.++|+|..
T Consensus 9 ~~~~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d-~deEiE~eynil~~~~~hpnv~~fyg~~~k 87 (953)
T KOG0587|consen 9 IDLSSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTED-EEEEIELEYNMLKKYSHHPNVATFYGAFIK 87 (953)
T ss_pred cchhhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCcc-ccHHHHHHHHHHHhccCCCCcceEEEEEEE
Confidence 3455566677889999999999999999999 45899999999876443 345788899999988 69999999999843
Q ss_pred -----CCeEEEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEE
Q 005227 443 -----EGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKV 517 (707)
Q Consensus 443 -----~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl 517 (707)
++.+|||||||.+||..|+++.-....+.|..+..|++.++.||.+||... ++|||||-.|||++.++.||+
T Consensus 88 ~~~~~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nk---viHRDikG~NiLLT~e~~VKL 164 (953)
T KOG0587|consen 88 KDPGNGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNK---VIHRDIKGQNVLLTENAEVKL 164 (953)
T ss_pred ecCCCCCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcc---eeeecccCceEEEeccCcEEE
Confidence 468999999999999999998866778999999999999999999999998 999999999999999999999
Q ss_pred eeecccccCCCCCCCCccccceecccccCCCccchhhhcc-----CCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHH
Q 005227 518 ADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-----HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVRE 592 (707)
Q Consensus 518 ~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~ 592 (707)
.|||.+..+... ........||+.|||||++.. ..|+.++|+||+|++..||.-|.+|+.+.....
T Consensus 165 vDFGvSaQldsT-------~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmr-- 235 (953)
T KOG0587|consen 165 VDFGVSAQLDST-------VGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMR-- 235 (953)
T ss_pred eeeeeeeeeecc-------cccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhh--
Confidence 999999876432 234456789999999999975 357789999999999999999999997654311
Q ss_pred HHHHhhcccchhhccCCCCC--CChHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 005227 593 VNIAYQSSMMFSVIDGNMGS--YPSECVEKFIKLALKCCQDETDARPSMSEVMR 644 (707)
Q Consensus 593 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~ 644 (707)
.++.+.....+. -|..+..++.+++..|+.++.+.||++.++++
T Consensus 236 --------aLF~IpRNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~ 281 (953)
T KOG0587|consen 236 --------ALFLIPRNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLK 281 (953)
T ss_pred --------hhccCCCCCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhcc
Confidence 111111111111 24566667777777777777777776666654
No 385
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=100.00 E-value=2e-33 Score=289.10 Aligned_cols=199 Identities=26% Similarity=0.366 Sum_probs=166.0
Q ss_pred CCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCC-----hhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEE
Q 005227 376 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS-----LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 449 (707)
Q Consensus 376 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~-----~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV 449 (707)
+|.+.+.||+|+||.||++... .+..+++|.++... .....++..|+.++++++||||+++++++.+....++|
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII 80 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence 5788899999999999999864 34556666554321 12234677899999999999999999999988999999
Q ss_pred EecCCCCCHHHHHhh--cCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCC
Q 005227 450 YEFMSNGTLRDQLSA--KSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAP 527 (707)
Q Consensus 450 ~E~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~ 527 (707)
|||+++++|.+++.. .....+++..++.++.|+++||.|||+.+ ++|+||||+||++++ +.+||+|||.++...
T Consensus 81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~h~~l~~~nili~~-~~~~l~d~g~~~~~~ 156 (260)
T cd08222 81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRR---ILHRDLKAKNIFLKN-NLLKIGDFGVSRLLM 156 (260)
T ss_pred EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcC---ccccCCChhheEeec-CCEeecccCceeecC
Confidence 999999999999865 23456899999999999999999999998 999999999999986 569999999987653
Q ss_pred CCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCC
Q 005227 528 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISH 585 (707)
Q Consensus 528 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~ 585 (707)
... .......|+..|+|||...+..++.++||||||+++|+|++|..||..
T Consensus 157 ~~~-------~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~ 207 (260)
T cd08222 157 GSC-------DLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEG 207 (260)
T ss_pred CCc-------ccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 321 112234578899999999888899999999999999999999999864
No 386
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=100.00 E-value=9.4e-33 Score=292.35 Aligned_cols=195 Identities=33% Similarity=0.522 Sum_probs=166.2
Q ss_pred CCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCCh---hhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEec
Q 005227 377 FNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 452 (707)
Q Consensus 377 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~ 452 (707)
|...+.||+|+||+||+|... +++.||+|++..... ...+.+.+|+++++.++|+|++++++++.+....++||||
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 102 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY 102 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence 556788999999999999964 689999999864322 2235688899999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCC
Q 005227 453 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 532 (707)
Q Consensus 453 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 532 (707)
+. |++.+++... ..++++..++.++.|++.||+|||+.+ ++|+||+|+||++++++.+||+|||++.....
T Consensus 103 ~~-~~l~~~l~~~-~~~l~~~~~~~~~~qi~~al~~LH~~g---i~H~dl~p~nili~~~~~~kL~dfg~~~~~~~---- 173 (313)
T cd06633 103 CL-GSASDLLEVH-KKPLQEVEIAAITHGALQGLAYLHSHN---MIHRDIKAGNILLTEPGQVKLADFGSASKSSP---- 173 (313)
T ss_pred CC-CCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCChhhEEECCCCCEEEeecCCCcccCC----
Confidence 95 6888887653 345899999999999999999999998 99999999999999999999999998864321
Q ss_pred CccccceecccccCCCccchhhhc---cCCCCCchhhHHHHHHHHHHHcCCCCCCCCc
Q 005227 533 GIVPAHVSTVVKGTPGYLDPEYFL---THKLTDKSDVYSLGVVFLELLTGMQPISHGK 587 (707)
Q Consensus 533 ~~~~~~~~~~~~gt~~y~aPE~~~---~~~~s~~sDVwSlGvll~elltG~~pf~~~~ 587 (707)
.....|+..|+|||++. ...++.++|||||||++|||++|..||....
T Consensus 174 -------~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~ 224 (313)
T cd06633 174 -------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN 224 (313)
T ss_pred -------CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 12345788999999984 4568889999999999999999999986543
No 387
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2e-34 Score=307.55 Aligned_cols=249 Identities=22% Similarity=0.265 Sum_probs=199.1
Q ss_pred hcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHcc-CCCcceeEEEEEEeCCeEEEEEe
Q 005227 374 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQMLVYE 451 (707)
Q Consensus 374 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lV~E 451 (707)
++.|.....+|.|+|+.|-.+... +++..+||++.... .+-.+|+.++... +||||+++.+.+.+..+.|+|||
T Consensus 321 ~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~----~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e 396 (612)
T KOG0603|consen 321 TESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA----DDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVME 396 (612)
T ss_pred chhhccccccCCCCccceeeeeccccccchhheeccccc----cccccccchhhhhcCCCcceeecceecCCceeeeeeh
Confidence 566777788999999999999854 78899999997652 2334577666665 79999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEE-cCCCcEEEeeecccccCCCCC
Q 005227 452 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILL-DHKFTAKVADFGLSRLAPVPD 530 (707)
Q Consensus 452 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl-~~~~~~kl~DFGla~~~~~~~ 530 (707)
.+.++-+.+.+.... .....+..|+.+|+.|+.|||+++ +|||||||+|||+ ++.++++|+|||.++.....
T Consensus 397 ~l~g~ell~ri~~~~---~~~~e~~~w~~~lv~Av~~LH~~g---vvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~- 469 (612)
T KOG0603|consen 397 LLDGGELLRRIRSKP---EFCSEASQWAAELVSAVDYLHEQG---VVHRDLKPGNILLDGSAGHLRLTYFGFWSELERS- 469 (612)
T ss_pred hccccHHHHHHHhcc---hhHHHHHHHHHHHHHHHHHHHhcC---eeecCCChhheeecCCCCcEEEEEechhhhCchh-
Confidence 999998888775433 222777889999999999999999 9999999999999 69999999999999876432
Q ss_pred CCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCCC
Q 005227 531 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 610 (707)
Q Consensus 531 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 610 (707)
....+-|..|.|||+.....|+.++|+||||++||+|++|+.||.......
T Consensus 470 ---------~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~-------------------- 520 (612)
T KOG0603|consen 470 ---------CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGI-------------------- 520 (612)
T ss_pred ---------hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCchH--------------------
Confidence 223345788999999999999999999999999999999999996433210
Q ss_pred CCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCCCCCCC-CC
Q 005227 611 GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYV-SS 689 (707)
Q Consensus 611 ~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f-~~ 689 (707)
-+..|++ +|++. ...+..+.|||++||+.||++|++++|++.|||| +.
T Consensus 521 -------------ei~~~i~-----~~~~s-------------~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h~w~~~~ 569 (612)
T KOG0603|consen 521 -------------EIHTRIQ-----MPKFS-------------ECVSDEAKDLLQQLLQVDPALRLGADEIGAHPWFLSH 569 (612)
T ss_pred -------------HHHHhhc-----CCccc-------------cccCHHHHHHHHHhccCChhhCcChhhhccCcchhcC
Confidence 1111222 22222 2234566799999999999999999999999999 44
Q ss_pred CCCC
Q 005227 690 DVSG 693 (707)
Q Consensus 690 ~~~~ 693 (707)
+...
T Consensus 570 ~t~p 573 (612)
T KOG0603|consen 570 PTFP 573 (612)
T ss_pred CCCC
Confidence 4433
No 388
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=100.00 E-value=1.4e-33 Score=286.24 Aligned_cols=179 Identities=23% Similarity=0.214 Sum_probs=153.3
Q ss_pred eCceEEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEecCCCCCHHHHHhh
Q 005227 386 GGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSA 464 (707)
Q Consensus 386 G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~ 464 (707)
|.||.||++... +++.||+|++.... .+.+|...+....||||+++++++...+..++||||+++|+|.+++..
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 78 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS-----EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISK 78 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh-----hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHH
Confidence 899999999964 78999999987543 233455555566799999999999999999999999999999999865
Q ss_pred cCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCCCccccceecccc
Q 005227 465 KSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVK 544 (707)
Q Consensus 465 ~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~ 544 (707)
.. .+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.++++|||.+...... .....
T Consensus 79 ~~--~l~~~~~~~~~~ql~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~----------~~~~~ 143 (237)
T cd05576 79 FL--NIPEECVKRWAAEMVVALDALHREG---IVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDS----------CDGEA 143 (237)
T ss_pred hc--CCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHEEEcCCCCEEEecccchhccccc----------cccCC
Confidence 43 4899999999999999999999998 999999999999999999999999987654321 11234
Q ss_pred cCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCC
Q 005227 545 GTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPIS 584 (707)
Q Consensus 545 gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~ 584 (707)
++..|+|||.+.+..++.++||||+||++|||++|+.|+.
T Consensus 144 ~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~ 183 (237)
T cd05576 144 VENMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVE 183 (237)
T ss_pred cCccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhh
Confidence 5678999999988889999999999999999999988764
No 389
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=100.00 E-value=4e-34 Score=280.78 Aligned_cols=282 Identities=23% Similarity=0.313 Sum_probs=215.5
Q ss_pred hcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccC--ChhhHHHHHHHHHHHHccCCCcceeEEEEEEeC------C
Q 005227 374 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEG--SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE------G 444 (707)
Q Consensus 374 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~------~ 444 (707)
..+|.....+|.|.- .|..|.+. .++.||+|++... .....++..+|..++..+.|+||++++.+|.-. .
T Consensus 16 ~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~ 94 (369)
T KOG0665|consen 16 PKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQ 94 (369)
T ss_pred eeeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHH
Confidence 346777888899888 66666643 6899999987643 233457888999999999999999999998543 3
Q ss_pred eEEEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccc
Q 005227 445 EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSR 524 (707)
Q Consensus 445 ~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~ 524 (707)
+.|+||||| .++|...+. ..++-.++..|..|++.|++|||+.+ |+||||||+||++..+..+||.|||+|+
T Consensus 95 e~y~v~e~m-~~nl~~vi~----~elDH~tis~i~yq~~~~ik~lhs~~---IihRdLkPsnivv~~~~~lKi~dfg~ar 166 (369)
T KOG0665|consen 95 EVYLVMELM-DANLCQVIL----MELDHETISYILYQMLCGIKHLHSAG---IIHRDLKPSNIVVNSDCTLKILDFGLAR 166 (369)
T ss_pred hHHHHHHhh-hhHHHHHHH----HhcchHHHHHHHHHHHHHHHHHHhcc---eeecccCcccceecchhheeeccchhhc
Confidence 679999999 569999886 34778889999999999999999999 9999999999999999999999999998
Q ss_pred cCCCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchh
Q 005227 525 LAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFS 604 (707)
Q Consensus 525 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~ 604 (707)
.... ....+..+.|..|+|||++.+..+.+.+||||+||++.||++|+..|.......+|....
T Consensus 167 ~e~~--------~~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~-------- 230 (369)
T KOG0665|consen 167 TEDT--------DFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKII-------- 230 (369)
T ss_pred ccCc--------ccccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHH--------
Confidence 6432 224456778999999999999889999999999999999999999987544444443332
Q ss_pred hccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh--------cCCCCCCCCCccccCCCCCCCCCCC
Q 005227 605 VIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN--------MMPESDTKTPEFINSEHTSKEETPP 676 (707)
Q Consensus 605 ~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~--------~~~~~~~~~~dll~~~L~~dP~~R~ 676 (707)
..++...+.+..++...+..-+.. ||.... ...-+.+-+ ..+.....+.|++.+||..||++|+
T Consensus 231 ---~~lgtpd~~F~~qL~~~~r~yv~~----~~~y~~-~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Ri 302 (369)
T KOG0665|consen 231 ---EQLGTPDPSFMKQLQPTVRNYVEN----RPQYQA-ISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRI 302 (369)
T ss_pred ---HHhcCCCHHHHHHhhHHHHHHhhc----ChHhhc-cchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcc
Confidence 223445566777777766665552 332211 111111100 1112223456799999999999999
Q ss_pred CCCcCCCCCCCC
Q 005227 677 SSSSMLKHPYVS 688 (707)
Q Consensus 677 sa~e~L~Hp~f~ 688 (707)
++++||+|||+.
T Consensus 303 sv~daL~HPY~~ 314 (369)
T KOG0665|consen 303 SVDDALRHPYIK 314 (369)
T ss_pred cHHHHhcCCeee
Confidence 999999999997
No 390
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-33 Score=302.59 Aligned_cols=200 Identities=31% Similarity=0.464 Sum_probs=172.1
Q ss_pred CCccceEeeeCceEEEEEEe-CCCcEEEEEEeccCC-hhhHHHHHHHHHHHHccCCCcceeEEEEEEeC------CeEEE
Q 005227 377 FNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE------GEQML 448 (707)
Q Consensus 377 ~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~------~~~~l 448 (707)
+...+.||+|+||.||+|+. .+|+.||||.+.... ....+...+|+++|++++|+|||+++++=++. ....+
T Consensus 15 W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vl 94 (732)
T KOG4250|consen 15 WEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVL 94 (732)
T ss_pred eeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceE
Confidence 44568899999999999995 589999999987643 34457788999999999999999999876443 46789
Q ss_pred EEecCCCCCHHHHHhhc-CCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEc--CCC--cEEEeeeccc
Q 005227 449 VYEFMSNGTLRDQLSAK-SKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLD--HKF--TAKVADFGLS 523 (707)
Q Consensus 449 V~E~~~~gsL~~~l~~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~--~~~--~~kl~DFGla 523 (707)
|||||.+|||...|.+. +...+++...+.+..++..||.|||+++ |+||||||.||++- .+| ..||+|||.|
T Consensus 95 vmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~---IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~A 171 (732)
T KOG4250|consen 95 VMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENG---IVHRDLKPGNIVLQIGEDGQSIYKLTDFGAA 171 (732)
T ss_pred EEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcC---ceeccCCCCcEEEeecCCCceEEeeeccccc
Confidence 99999999999999763 3456999999999999999999999999 99999999999983 333 5799999999
Q ss_pred ccCCCCCCCCccccceecccccCCCccchhhhcc-CCCCCchhhHHHHHHHHHHHcCCCCCCCCc
Q 005227 524 RLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGK 587 (707)
Q Consensus 524 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDVwSlGvll~elltG~~pf~~~~ 587 (707)
+..... .......||..|.+||+... +.|+..+|.|||||++||++||..||.+..
T Consensus 172 rel~d~--------s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~ 228 (732)
T KOG4250|consen 172 RELDDN--------SLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFG 228 (732)
T ss_pred ccCCCC--------CeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCC
Confidence 977542 24567889999999999995 889999999999999999999999996543
No 391
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=100.00 E-value=1.3e-33 Score=287.56 Aligned_cols=295 Identities=22% Similarity=0.343 Sum_probs=218.1
Q ss_pred HHHHHhcCCCccceEeeeCceEEEEEEeC----CCcEEEEEEeccCChhhHHHHHHHHHHHHcc-CCCcceeEEEEEEeC
Q 005227 369 EMALATNNFNSSTQIGQGGYGKVYKGILP----DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEE 443 (707)
Q Consensus 369 ~l~~~~~~~~~~~~lG~G~fg~Vy~~~~~----~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~ 443 (707)
.+....+.|...++||+|.|++||+|.+. ..+.||+|.+...+ ...++..|+++|..+ .+.||+++.+++...
T Consensus 30 ~~p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts--~p~ri~~El~~L~~~gG~~ni~~~~~~~rnn 107 (418)
T KOG1167|consen 30 DIPFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTS--SPSRILNELEMLYRLGGSDNIIKLNGCFRNN 107 (418)
T ss_pred hhhhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeeccccc--CchHHHHHHHHHHHhccchhhhcchhhhccC
Confidence 34445677889999999999999999953 46789999987533 335789999999999 599999999999999
Q ss_pred CeEEEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcC-CCcEEEeeecc
Q 005227 444 GEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDH-KFTAKVADFGL 522 (707)
Q Consensus 444 ~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~-~~~~kl~DFGl 522 (707)
+..++|+||+++....++... ++...+..+.+.++.||+++|+.| ||||||||+|+|.+. .+.-.|.|||+
T Consensus 108 d~v~ivlp~~~H~~f~~l~~~-----l~~~~i~~Yl~~ll~Al~~~h~~G---IvHRDiKpsNFL~n~~t~rg~LvDFgL 179 (418)
T KOG1167|consen 108 DQVAIVLPYFEHDRFRDLYRS-----LSLAEIRWYLRNLLKALAHLHKNG---IVHRDIKPSNFLYNRRTQRGVLVDFGL 179 (418)
T ss_pred CeeEEEecccCccCHHHHHhc-----CCHHHHHHHHHHHHHHhhhhhccC---ccccCCCccccccccccCCceEEechh
Confidence 999999999999999888843 668889999999999999999999 999999999999984 56789999999
Q ss_pred cccCCCCC----------------CC---------------------CccccceecccccCCCccchhhhcc-CCCCCch
Q 005227 523 SRLAPVPD----------------IE---------------------GIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKS 564 (707)
Q Consensus 523 a~~~~~~~----------------~~---------------------~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~s 564 (707)
|....... .. ............||+||+|||++.. ...+.++
T Consensus 180 A~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~Qttai 259 (418)
T KOG1167|consen 180 AQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAI 259 (418)
T ss_pred HHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCcc
Confidence 97211000 00 0001112234579999999999976 6778899
Q ss_pred hhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCCCCCCChHHHHHHHHHHHH--hcccCCCCCCCHHHH
Q 005227 565 DVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALK--CCQDETDARPSMSEV 642 (707)
Q Consensus 565 DVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~--c~~~~p~~RPt~~~v 642 (707)
||||.||+++.+++++.||....+..+........ +....+.+...+-.+ .|++ ..+|+..++
T Consensus 260 Diws~GVI~Lslls~~~PFf~a~dd~~al~ei~ti-------------fG~~~mrk~A~l~g~~~l~~k--sn~~~~~e~ 324 (418)
T KOG1167|consen 260 DIWSAGVILLSLLSRRYPFFKAKDDADALAEIATI-------------FGSAEMRKCAALPGRILLWQK--SNIPTIPEL 324 (418)
T ss_pred ceeeccceeehhhccccccccCccccchHHHHHHH-------------hChHHHHHHhhcCCceeeecc--ccccccHHH
Confidence 99999999999999999998665533322211100 111122222222112 2332 446777776
Q ss_pred HHHHHHhh-hcCCC--------------CCCCCCccccCCCCCCCCCCCCCCcCCCCCCCC
Q 005227 643 MRELESIW-NMMPE--------------SDTKTPEFINSEHTSKEETPPSSSSMLKHPYVS 688 (707)
Q Consensus 643 ~~~L~~~~-~~~~~--------------~~~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f~ 688 (707)
....+.+. ....+ ....+.||+.++|+.||.+|+||+|||+||||.
T Consensus 325 ~~~f~s~~~~~~~~~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkHpFF~ 385 (418)
T KOG1167|consen 325 RVNFETLHIESIYKSRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKHPFFD 385 (418)
T ss_pred HhchhccChhhcccccccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcCcCCc
Confidence 66655552 22111 112456899999999999999999999999998
No 392
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-34 Score=298.58 Aligned_cols=202 Identities=22% Similarity=0.337 Sum_probs=178.7
Q ss_pred hcCCCccceEeeeCceEEEEEEeCCCc-EEEEEEeccCChh---hHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEE
Q 005227 374 TNNFNSSTQIGQGGYGKVYKGILPDGT-VVAVKRAQEGSLQ---GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 449 (707)
Q Consensus 374 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~-~vavK~l~~~~~~---~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV 449 (707)
..+++....||-|+||.|-++..+..+ .+|+|++++.... .++.+..|-.+|...+.|.||++|-.|.+.+..|+.
T Consensus 419 l~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmL 498 (732)
T KOG0614|consen 419 LSDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYML 498 (732)
T ss_pred hhhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhh
Confidence 345566778999999999999875433 4899988765433 345688899999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCC
Q 005227 450 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 529 (707)
Q Consensus 450 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~ 529 (707)
||-|-||.|+..|++++ .++....+.++..+.+|++|||+++ ||.|||||+|.++|.+|.+||.|||.|+....
T Consensus 499 mEaClGGElWTiLrdRg--~Fdd~tarF~~acv~EAfeYLH~k~---iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~- 572 (732)
T KOG0614|consen 499 MEACLGGELWTILRDRG--SFDDYTARFYVACVLEAFEYLHRKG---IIYRDLKPENLLLDNRGYLKLVDFGFAKKIGS- 572 (732)
T ss_pred HHhhcCchhhhhhhhcC--CcccchhhhhHHHHHHHHHHHHhcC---ceeccCChhheeeccCCceEEeehhhHHHhcc-
Confidence 99999999999997654 5999999999999999999999999 99999999999999999999999999998754
Q ss_pred CCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCch
Q 005227 530 DIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKN 588 (707)
Q Consensus 530 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~~~ 588 (707)
...+...+||+.|.|||++.....+.++|.||+|+++|||++|.+||...+.
T Consensus 573 -------g~KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dp 624 (732)
T KOG0614|consen 573 -------GRKTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDP 624 (732)
T ss_pred -------CCceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCch
Confidence 3456778999999999999999999999999999999999999999976544
No 393
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=100.00 E-value=6.4e-34 Score=309.86 Aligned_cols=256 Identities=27% Similarity=0.381 Sum_probs=197.1
Q ss_pred CCCccceEeeeCceE-EEEEEeCCCcEEEEEEeccCChhhHHHHHHHHHHHHcc-CCCcceeEEEEEEeCCeEEEEEecC
Q 005227 376 NFNSSTQIGQGGYGK-VYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQMLVYEFM 453 (707)
Q Consensus 376 ~~~~~~~lG~G~fg~-Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lV~E~~ 453 (707)
-|...+++|.|+.|+ ||+|.. +|+.||||++-. +...-+.+|+..|+.- .|||||++++.-.+.++.||..|.|
T Consensus 510 ~~~~~eilG~Gs~Gt~Vf~G~y-e~R~VAVKrll~---e~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC 585 (903)
T KOG1027|consen 510 FFSPKEILGYGSNGTVVFRGVY-EGREVAVKRLLE---EFFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELC 585 (903)
T ss_pred eeccHHHcccCCCCcEEEEEee-CCceehHHHHhh---HhHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHh
Confidence 355567899999987 799999 689999999854 3345678999999988 6999999999999999999999999
Q ss_pred CCCCHHHHHhhc--CCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcC-----CCcEEEeeecccccC
Q 005227 454 SNGTLRDQLSAK--SKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDH-----KFTAKVADFGLSRLA 526 (707)
Q Consensus 454 ~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~-----~~~~kl~DFGla~~~ 526 (707)
..+|.+++... ..........+.+..|+++||++||+.+ ||||||||.||||+. ..+++|+|||+++.+
T Consensus 586 -~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~---iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl 661 (903)
T KOG1027|consen 586 -ACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLK---IVHRDLKPQNILISVPSADGTLRAKISDFGLSKKL 661 (903)
T ss_pred -hhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcc---cccccCCCceEEEEccCCCcceeEEeccccccccc
Confidence 57999999774 1111222445788999999999999988 999999999999975 257999999999987
Q ss_pred CCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcC-CCCCCCCchhHHHHHHHhhcccchhh
Q 005227 527 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTG-MQPISHGKNIVREVNIAYQSSMMFSV 605 (707)
Q Consensus 527 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG-~~pf~~~~~~~~~~~~~~~~~~~~~~ 605 (707)
...... -.......||.+|+|||++....-+.++||||+||++|+.++| ..||.+. ..++.........
T Consensus 662 ~~~~sS----~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~--~~R~~NIl~~~~~---- 731 (903)
T KOG1027|consen 662 AGGKSS----FSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDS--LERQANILTGNYT---- 731 (903)
T ss_pred CCCcch----hhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCch--HHhhhhhhcCccc----
Confidence 654311 1224567799999999999998888999999999999999995 8999642 2222221100000
Q ss_pred ccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCCCCC
Q 005227 606 IDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHP 685 (707)
Q Consensus 606 ~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hp 685 (707)
..+++.++ +..+.|||.+|+..||..||+|.++|.||
T Consensus 732 --------------------L~~L~~~~-----------------------d~eA~dLI~~ml~~dP~~RPsa~~VL~HP 768 (903)
T KOG1027|consen 732 --------------------LVHLEPLP-----------------------DCEAKDLISRMLNPDPQLRPSATDVLNHP 768 (903)
T ss_pred --------------------eeeeccCc-----------------------hHHHHHHHHHhcCCCcccCCCHHHHhCCC
Confidence 00111111 11455899999999999999999999999
Q ss_pred CCCCCCC
Q 005227 686 YVSSDVS 692 (707)
Q Consensus 686 ~f~~~~~ 692 (707)
+|.....
T Consensus 769 lFW~~ek 775 (903)
T KOG1027|consen 769 LFWDSEK 775 (903)
T ss_pred ccCChHH
Confidence 9976543
No 394
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.98 E-value=1.5e-32 Score=269.67 Aligned_cols=202 Identities=24% Similarity=0.402 Sum_probs=177.6
Q ss_pred HHHhcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCCh---hhHHHHHHHHHHHHcc-CCCcceeEEEEEEeCCe
Q 005227 371 ALATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGE 445 (707)
Q Consensus 371 ~~~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~ 445 (707)
....++|+..++||+|+|+.|-.++++ +.+.+|+|++++.-. ++...++.|-.+..+. +||.+|.+..+|+.+..
T Consensus 246 ~l~l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesr 325 (593)
T KOG0695|consen 246 GLGLQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESR 325 (593)
T ss_pred ccccccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccce
Confidence 345578999999999999999999965 688999999876432 3334567788887776 79999999999999999
Q ss_pred EEEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeeccccc
Q 005227 446 QMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRL 525 (707)
Q Consensus 446 ~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~ 525 (707)
.++|.||++||+|--.++++ ..++++.++.+...|.-||.|||+.+ ||.||||.+|||+|.+|++|++|+|+++.
T Consensus 326 lffvieyv~ggdlmfhmqrq--rklpeeharfys~ei~lal~flh~rg---iiyrdlkldnvlldaeghikltdygmcke 400 (593)
T KOG0695|consen 326 LFFVIEYVNGGDLMFHMQRQ--RKLPEEHARFYSAEICLALNFLHERG---IIYRDLKLDNVLLDAEGHIKLTDYGMCKE 400 (593)
T ss_pred EEEEEEEecCcceeeehhhh--hcCcHHHhhhhhHHHHHHHHHHhhcC---eeeeeccccceEEccCCceeecccchhhc
Confidence 99999999999997777543 45999999999999999999999999 99999999999999999999999999874
Q ss_pred CCCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCC
Q 005227 526 APVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPIS 584 (707)
Q Consensus 526 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~ 584 (707)
+..+.......+||+.|+|||++.+..|....|+|++||+|+||+.|+.||+
T Consensus 401 -------~l~~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfd 452 (593)
T KOG0695|consen 401 -------GLGPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFD 452 (593)
T ss_pred -------CCCCCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcc
Confidence 2333556778899999999999999999999999999999999999999996
No 395
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.98 E-value=6.2e-34 Score=293.83 Aligned_cols=215 Identities=24% Similarity=0.273 Sum_probs=181.4
Q ss_pred cCcccccHHHHHHHhcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHccC------CCc
Q 005227 360 DGVRSFTYGEMALATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLH------HRN 432 (707)
Q Consensus 360 ~~~~~~~~~~l~~~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~------h~n 432 (707)
+....+.+.-.++...+|.+....|+|-|++|..|... -|..||||++...... .+.=+.|+++|++|. --|
T Consensus 417 DaEGYYrv~igE~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M-~KtGl~EleiLkKL~~AD~Edk~H 495 (752)
T KOG0670|consen 417 DAEGYYRVRIGELLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVM-HKTGLKELEILKKLNDADPEDKFH 495 (752)
T ss_pred cccceEEEehhhhhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchHH-hhhhhHHHHHHHHhhccCchhhhH
Confidence 34456667677778889999999999999999999965 5789999999864332 345578999999995 347
Q ss_pred ceeEEEEEEeCCeEEEEEecCCCCCHHHHHhhcCC-CCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcC
Q 005227 433 LVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSK-EPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDH 511 (707)
Q Consensus 433 Iv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~ 511 (707)
+++++..|...+++|||+|-+ .-+|.++|+.-+. -.+....+..++.|+.-||..|-..+ |+|.||||+||||++
T Consensus 496 clrl~r~F~hknHLClVFE~L-slNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~---vlHaDIKPDNiLVNE 571 (752)
T KOG0670|consen 496 CLRLFRHFKHKNHLCLVFEPL-SLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCG---VLHADIKPDNILVNE 571 (752)
T ss_pred HHHHHHHhhhcceeEEEehhh-hchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcC---eeecccCccceEecc
Confidence 999999999999999999988 5699999987543 35888999999999999999999999 999999999999986
Q ss_pred C-CcEEEeeecccccCCCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCch
Q 005227 512 K-FTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKN 588 (707)
Q Consensus 512 ~-~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~~~ 588 (707)
. ..+||||||.|......+ .+.+..+..|+|||++.|-+|+...|+||.||+||||.||+..|....+
T Consensus 572 ~k~iLKLCDfGSA~~~~ene---------itPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TN 640 (752)
T KOG0670|consen 572 SKNILKLCDFGSASFASENE---------ITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTN 640 (752)
T ss_pred CcceeeeccCcccccccccc---------ccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCc
Confidence 5 568999999998765433 2334456689999999999999999999999999999999999976444
No 396
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.98 E-value=3e-32 Score=251.60 Aligned_cols=218 Identities=26% Similarity=0.378 Sum_probs=177.9
Q ss_pred HHHHHhcCCCccceEeeeCceEEEEEEe-CCCcEEEEEEeccCC-hhhHHHHHHHHHHHHc-cCCCcceeEEEEEEeCCe
Q 005227 369 EMALATNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGS-LQGEKEFLTEIQFLSR-LHHRNLVSLVGYCDEEGE 445 (707)
Q Consensus 369 ~l~~~~~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~-l~h~nIv~l~~~~~~~~~ 445 (707)
.++...+.......||+|++|.|-+-++ .+|...|+|++...- .+..++..+|+.+..+ ..+|.+|.+||....+..
T Consensus 40 ~~eV~ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regd 119 (282)
T KOG0984|consen 40 NFEVPADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGD 119 (282)
T ss_pred ccccchhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhcccc
Confidence 3455555666678899999999988885 489999999987532 3345678888887555 579999999999999999
Q ss_pred EEEEEecCCCCCHHHHHhh--cCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeeccc
Q 005227 446 QMLVYEFMSNGTLRDQLSA--KSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLS 523 (707)
Q Consensus 446 ~~lV~E~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla 523 (707)
.++.||.|. -||..+-++ ......++...-+||..+.+||.|||++- .+||||+||+|||++.+|++|++|||.+
T Consensus 120 vwIcME~M~-tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL--~vIHRDvKPsNiLIn~~GqVKiCDFGIs 196 (282)
T KOG0984|consen 120 VWICMELMD-TSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKL--SVIHRDVKPSNILINYDGQVKICDFGIS 196 (282)
T ss_pred EEEeHHHhh-hhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHh--hhhhccCCcceEEEccCCcEEEcccccc
Confidence 999999994 477766544 34556899999999999999999999965 4999999999999999999999999999
Q ss_pred ccCCCCCCCCccccceecccccCCCccchhhhcc----CCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHh
Q 005227 524 RLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT----HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAY 597 (707)
Q Consensus 524 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~ 597 (707)
-.+.. +-..+...|...|||||.+.. ..|+-++||||+|+++.||.+++.||+.+...-+++....
T Consensus 197 G~L~d--------SiAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~tpF~qLkqvV 266 (282)
T KOG0984|consen 197 GYLVD--------SIAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGTPFQQLKQVV 266 (282)
T ss_pred eeehh--------hhHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCCHHHHHHHHh
Confidence 76542 222334568899999999864 4789999999999999999999999988777666655543
No 397
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.97 E-value=1.1e-31 Score=282.58 Aligned_cols=209 Identities=22% Similarity=0.311 Sum_probs=174.6
Q ss_pred cCCCccceEeeeCceEEEEEE-eCCCcEEEEEEeccCChhhH---HHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEE
Q 005227 375 NNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQGE---KEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 450 (707)
Q Consensus 375 ~~~~~~~~lG~G~fg~Vy~~~-~~~~~~vavK~l~~~~~~~~---~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~ 450 (707)
.-|..++.||-|+||.|.++. .++...||.|.+.+...-.. ..++.|-.||...+.+-||+||-.|.+++.+|+||
T Consensus 629 SmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFVM 708 (1034)
T KOG0608|consen 629 SMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVM 708 (1034)
T ss_pred cceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEEE
Confidence 456678899999999999998 45677899999876543332 34678999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCC
Q 005227 451 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 530 (707)
Q Consensus 451 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~ 530 (707)
||++||++-.+|-+.+ .|.+..++.++..++.|+++.|..| +|||||||+|||||.+|++||+|||++.-+....
T Consensus 709 dYIPGGDmMSLLIrmg--IFeE~LARFYIAEltcAiesVHkmG---FIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTH 783 (1034)
T KOG0608|consen 709 DYIPGGDMMSLLIRMG--IFEEDLARFYIAELTCAIESVHKMG---FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTH 783 (1034)
T ss_pred eccCCccHHHHHHHhc--cCHHHHHHHHHHHHHHHHHHHHhcc---ceecccCccceEEccCCceeeeeccccccceecc
Confidence 9999999999997654 4889999999999999999999999 9999999999999999999999999985432211
Q ss_pred ---CCC-----------------ccc---------------cceecccccCCCccchhhhccCCCCCchhhHHHHHHHHH
Q 005227 531 ---IEG-----------------IVP---------------AHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLE 575 (707)
Q Consensus 531 ---~~~-----------------~~~---------------~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~e 575 (707)
+.. ... .......+||..|+|||++....|+...|+||.||||||
T Consensus 784 dskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~e 863 (1034)
T KOG0608|consen 784 DSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILYE 863 (1034)
T ss_pred ccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHHH
Confidence 000 000 001123579999999999999999999999999999999
Q ss_pred HHcCCCCCCCCch
Q 005227 576 LLTGMQPISHGKN 588 (707)
Q Consensus 576 lltG~~pf~~~~~ 588 (707)
|+.|+.||.....
T Consensus 864 m~~g~~pf~~~tp 876 (1034)
T KOG0608|consen 864 MLVGQPPFLADTP 876 (1034)
T ss_pred HhhCCCCccCCCC
Confidence 9999999976544
No 398
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.97 E-value=3.2e-30 Score=260.95 Aligned_cols=187 Identities=35% Similarity=0.548 Sum_probs=165.9
Q ss_pred CceEEEEEEeC-CCcEEEEEEeccCChhh-HHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEecCCCCCHHHHHhh
Q 005227 387 GYGKVYKGILP-DGTVVAVKRAQEGSLQG-EKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSA 464 (707)
Q Consensus 387 ~fg~Vy~~~~~-~~~~vavK~l~~~~~~~-~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~ 464 (707)
+||.||+|... +++.||+|++....... .+.+.+|++.+++++|+|++++++++......++||||+++++|.+++..
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~ 80 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK 80 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence 58999999976 58999999998755544 67899999999999999999999999999999999999999999999966
Q ss_pred cCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCCCccccceecccc
Q 005227 465 KSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVK 544 (707)
Q Consensus 465 ~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~ 544 (707)
... +++..++.++.++++++.|||+.+ ++|+||+|+||++++++.++|+|||.+....... ......
T Consensus 81 ~~~--~~~~~~~~~~~~l~~~l~~lh~~~---i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~--------~~~~~~ 147 (244)
T smart00220 81 RGR--LSEDEARFYARQILSALEYLHSNG---IIHRDLKPENILLDEDGHVKLADFGLARQLDPGG--------LLTTFV 147 (244)
T ss_pred ccC--CCHHHHHHHHHHHHHHHHHHHHcC---eecCCcCHHHeEECCCCcEEEccccceeeecccc--------cccccc
Confidence 433 889999999999999999999998 9999999999999999999999999998764321 223455
Q ss_pred cCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCC
Q 005227 545 GTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 586 (707)
Q Consensus 545 gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~ 586 (707)
++..|++||.+.+..++.++||||||++++++++|..||...
T Consensus 148 ~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~ 189 (244)
T smart00220 148 GTPEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGD 189 (244)
T ss_pred CCcCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 788999999999888999999999999999999999999653
No 399
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.96 E-value=5.4e-29 Score=260.62 Aligned_cols=196 Identities=25% Similarity=0.374 Sum_probs=168.9
Q ss_pred cCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCChhhH--------HHHHHHHHHHHccC---CCcceeEEEEEEe
Q 005227 375 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGE--------KEFLTEIQFLSRLH---HRNLVSLVGYCDE 442 (707)
Q Consensus 375 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~--------~~~~~E~~~l~~l~---h~nIv~l~~~~~~ 442 (707)
.+|+..+.+|.|+||.|+.|+++ +...|+||.+.+...-.. -.+-.|+++|..++ |+||++++++|++
T Consensus 561 s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEd 640 (772)
T KOG1152|consen 561 SDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFED 640 (772)
T ss_pred ccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeec
Confidence 46888999999999999999986 567899998876432111 23567999999997 9999999999999
Q ss_pred CCeEEEEEecC-CCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeec
Q 005227 443 EGEQMLVYEFM-SNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFG 521 (707)
Q Consensus 443 ~~~~~lV~E~~-~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFG 521 (707)
++.+||+||-. ++.+|.+++..+. .+++.....|++||+.|+++||+++ |||||||-+||.++.+|-+||+|||
T Consensus 641 dd~yyl~te~hg~gIDLFd~IE~kp--~m~E~eAk~IFkQV~agi~hlh~~~---ivhrdikdenvivd~~g~~klidfg 715 (772)
T KOG1152|consen 641 DDYYYLETEVHGEGIDLFDFIEFKP--RMDEPEAKLIFKQVVAGIKHLHDQG---IVHRDIKDENVIVDSNGFVKLIDFG 715 (772)
T ss_pred CCeeEEEecCCCCCcchhhhhhccC--ccchHHHHHHHHHHHhccccccccC---ceecccccccEEEecCCeEEEeecc
Confidence 99999999976 5678999996654 4899999999999999999999999 9999999999999999999999999
Q ss_pred ccccCCCCCCCCccccceecccccCCCccchhhhccCCCCC-chhhHHHHHHHHHHHcCCCCCC
Q 005227 522 LSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTD-KSDVYSLGVVFLELLTGMQPIS 584 (707)
Q Consensus 522 la~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~-~sDVwSlGvll~elltG~~pf~ 584 (707)
.|..... .......||.+|.|||++.+.+|-- .-|||++|++||.++....||.
T Consensus 716 saa~~ks---------gpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 716 SAAYTKS---------GPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred chhhhcC---------CCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence 9876542 2344578999999999999988754 5899999999999999988884
No 400
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.95 E-value=4.7e-27 Score=231.77 Aligned_cols=210 Identities=37% Similarity=0.605 Sum_probs=182.6
Q ss_pred EeeeCceEEEEEEeC-CCcEEEEEEeccCChh-hHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEecCCCCCHHH
Q 005227 383 IGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ-GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRD 460 (707)
Q Consensus 383 lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~-~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~ 460 (707)
||+|.+|.||++... +++.+++|++...... ..+.+.+|++.++.++|++++++++++......++||||+++++|.+
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~ 80 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD 80 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence 689999999999975 4899999999865443 34678999999999999999999999999999999999999999999
Q ss_pred HHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcC-CCcEEEeeecccccCCCCCCCCccccce
Q 005227 461 QLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDH-KFTAKVADFGLSRLAPVPDIEGIVPAHV 539 (707)
Q Consensus 461 ~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~-~~~~kl~DFGla~~~~~~~~~~~~~~~~ 539 (707)
++.... ..+++..++.++.+++++++|||+.+ ++|+||+|.||+++. ++.++|+|||.+........ .
T Consensus 81 ~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~~~---~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~-------~ 149 (215)
T cd00180 81 LLKENE-GKLSEDEILRILLQILEGLEYLHSNG---IIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS-------L 149 (215)
T ss_pred HHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc-------h
Confidence 997643 45899999999999999999999998 999999999999999 89999999999986543210 1
Q ss_pred ecccccCCCccchhhhccC-CCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCCCCCCChHHH
Q 005227 540 STVVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECV 618 (707)
Q Consensus 540 ~~~~~gt~~y~aPE~~~~~-~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 618 (707)
.....+...|++||..... .++.++|+|++|+++++|
T Consensus 150 ~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l------------------------------------------ 187 (215)
T cd00180 150 LKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL------------------------------------------ 187 (215)
T ss_pred hhcccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH------------------------------------------
Confidence 2234567899999999887 888999999999999998
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005227 619 EKFIKLALKCCQDETDARPSMSEVMRE 645 (707)
Q Consensus 619 ~~l~~l~~~c~~~~p~~RPt~~~v~~~ 645 (707)
..+.+++..|++.+|++||++.++++.
T Consensus 188 ~~~~~~l~~~l~~~p~~R~~~~~l~~~ 214 (215)
T cd00180 188 PELKDLIRKMLQKDPEKRPSAKEILEH 214 (215)
T ss_pred HHHHHHHHHHhhCCcccCcCHHHHhhC
Confidence 456788999999999999999988753
No 401
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.95 E-value=5.6e-27 Score=234.76 Aligned_cols=199 Identities=36% Similarity=0.527 Sum_probs=173.5
Q ss_pred CCccceEeeeCceEEEEEEeCC-CcEEEEEEeccCChh-hHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEecCC
Q 005227 377 FNSSTQIGQGGYGKVYKGILPD-GTVVAVKRAQEGSLQ-GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMS 454 (707)
Q Consensus 377 ~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~l~~~~~~-~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~ 454 (707)
|+..+.||+|++|+||++...+ ++.+|+|.+...... ..+.+.+|++.+++++|+|++++++++......++++||++
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCE 80 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccC
Confidence 5667899999999999999764 899999999876554 56789999999999999999999999999899999999999
Q ss_pred CCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCCCc
Q 005227 455 NGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGI 534 (707)
Q Consensus 455 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 534 (707)
+++|.+++...... +++..+..++.+++.++.|||+.+ ++|+|++|+||+++.++.++|+|||.+.......
T Consensus 81 ~~~L~~~~~~~~~~-~~~~~~~~~~~~l~~~l~~lh~~~---i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~---- 152 (225)
T smart00221 81 GGDLFDYLRKKGGK-LSEEEARFYLRQILEALEYLHSLG---IVHRDLKPENILLGMDGLVKLADFGLARFIHRDL---- 152 (225)
T ss_pred CCCHHHHHHhcccC-CCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEeeCceeeEecCcc----
Confidence 99999999764322 789999999999999999999998 9999999999999999999999999998764321
Q ss_pred cccceecccccCCCccchhhh-ccCCCCCchhhHHHHHHHHHHHcCCCCCCC
Q 005227 535 VPAHVSTVVKGTPGYLDPEYF-LTHKLTDKSDVYSLGVVFLELLTGMQPISH 585 (707)
Q Consensus 535 ~~~~~~~~~~gt~~y~aPE~~-~~~~~s~~sDVwSlGvll~elltG~~pf~~ 585 (707)
........++..|++||.+ ....++.++|||+||++++||++|+.||..
T Consensus 153 --~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 153 --AALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred --cccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 0122344577889999999 667788899999999999999999999965
No 402
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.95 E-value=4.8e-29 Score=265.17 Aligned_cols=300 Identities=21% Similarity=0.285 Sum_probs=224.0
Q ss_pred hcCCCccceEeeeCceEEEEEEe-CCCcEEEEEEeccCChhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEec
Q 005227 374 TNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 452 (707)
Q Consensus 374 ~~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~ 452 (707)
.++|+....+|.|+||.||||+. +.++..|||+++......-+-+.+|+-+++..+|+||+.++|.+...+..+++|||
T Consensus 14 ~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicMEy 93 (829)
T KOG0576|consen 14 QDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICMEY 93 (829)
T ss_pred ccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEEe
Confidence 45788899999999999999995 47999999999876666667788999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCC
Q 005227 453 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 532 (707)
Q Consensus 453 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 532 (707)
|.+|+|.+.-+. ..++++.++..+++..++||+|||+.+ =+|||||-.|||+++.|.+|++|||.+-.+...
T Consensus 94 cgggslQdiy~~--TgplselqiayvcRetl~gl~ylhs~g---k~hRdiKGanilltd~gDvklaDfgvsaqitat--- 165 (829)
T KOG0576|consen 94 CGGGSLQDIYHV--TGPLSELQIAYVCRETLQGLKYLHSQG---KIHRDIKGANILLTDEGDVKLADFGVSAQITAT--- 165 (829)
T ss_pred cCCCcccceeee--cccchhHHHHHHHhhhhccchhhhcCC---cccccccccceeecccCceeecccCchhhhhhh---
Confidence 999999988743 456999999999999999999999999 799999999999999999999999998654321
Q ss_pred CccccceecccccCCCccchhhhc---cCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCC
Q 005227 533 GIVPAHVSTVVKGTPGYLDPEYFL---THKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGN 609 (707)
Q Consensus 533 ~~~~~~~~~~~~gt~~y~aPE~~~---~~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 609 (707)
-.......||+.|||||+.. .+.|...+|||+.|++..|+-.-+.|..+-...... +. .....+++.
T Consensus 166 ----i~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l----~L--mTkS~~qpp 235 (829)
T KOG0576|consen 166 ----IAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRAL----FL--MTKSGFQPP 235 (829)
T ss_pred ----hhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHH----HH--hhccCCCCC
Confidence 22345678999999999974 477999999999999999998887776543321111 00 111222333
Q ss_pred CCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCC-CCcCCCCCCCC
Q 005227 610 MGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPS-SSSMLKHPYVS 688 (707)
Q Consensus 610 ~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~s-a~e~L~Hp~f~ 688 (707)
...-+..+..-+.++++.|+.++|++||++..+++. -+-..+.......++|+++=..+|.-|-- ..|.=.++|+.
T Consensus 236 ~lkDk~kws~~fh~fvK~altknpKkRptaeklL~h---~fvs~~l~~rl~~eLLdK~n~P~~~v~~~~d~~~E~~~~i~ 312 (829)
T KOG0576|consen 236 TLKDKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQH---PFVSQTLSRRLAIELLDKVNNPNPVVRYLEDYDGEDYLWIP 312 (829)
T ss_pred cccCCccchHHHHHHHHHHhcCCCccCCChhhheec---eeeccchhhHHHHHHHHHccCCCCcccccccCCcccccchh
Confidence 333455677888899999999999999998776541 11111122223345555555544333321 22222355555
Q ss_pred CCCCCC
Q 005227 689 SDVSGS 694 (707)
Q Consensus 689 ~~~~~~ 694 (707)
+.+.+.
T Consensus 313 ~~i~s~ 318 (829)
T KOG0576|consen 313 MRICST 318 (829)
T ss_pred hhhhcC
Confidence 555443
No 403
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.94 E-value=1.2e-26 Score=222.91 Aligned_cols=255 Identities=21% Similarity=0.334 Sum_probs=188.7
Q ss_pred hcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHcc-CCCcceeEEEE-EEeCCeEEEEE
Q 005227 374 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-HHRNLVSLVGY-CDEEGEQMLVY 450 (707)
Q Consensus 374 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~-~~~~~~~~lV~ 450 (707)
.+.|++.+.+|+|.||.+-++.++ +.+.+++|.+.... ...++|.+|..-=-.+ .|.||+.-|+. |+..+.+++++
T Consensus 23 ~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~-tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~q 101 (378)
T KOG1345|consen 23 EDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQ-TTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQ 101 (378)
T ss_pred hhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcch-hhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEee
Confidence 467999999999999999999976 67889999887633 3456888988765455 58999987765 67778899999
Q ss_pred ecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEE-c-CCCcEEEeeecccccCCC
Q 005227 451 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILL-D-HKFTAKVADFGLSRLAPV 528 (707)
Q Consensus 451 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl-~-~~~~~kl~DFGla~~~~~ 528 (707)
||++.|+|.+-+.. ..+.+.....++.|+++|+.|+|++. +||||||.+|||| + +..++|++|||+++....
T Consensus 102 E~aP~gdL~snv~~---~GigE~~~K~v~~ql~SAi~fMHskn---lVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~ 175 (378)
T KOG1345|consen 102 EFAPRGDLRSNVEA---AGIGEANTKKVFAQLLSAIEFMHSKN---LVHRDLKAENILIFDADFYRVKLCDFGLTRKVGT 175 (378)
T ss_pred ccCccchhhhhcCc---ccccHHHHHHHHHHHHHHHHHhhccc---hhhcccccceEEEecCCccEEEeeecccccccCc
Confidence 99999999988854 34888899999999999999999999 9999999999999 3 345899999999875431
Q ss_pred CCCCCccccceecccccCCCccchhhhccC-----CCCCchhhHHHHHHHHHHHcCCCCCCCCc--hhHHHHHHHhhccc
Q 005227 529 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTH-----KLTDKSDVYSLGVVFLELLTGMQPISHGK--NIVREVNIAYQSSM 601 (707)
Q Consensus 529 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~s~~sDVwSlGvll~elltG~~pf~~~~--~~~~~~~~~~~~~~ 601 (707)
......-+..|.+||+.... ...+.+|||.||+++|.++||+.|+.... +..-|-...|....
T Consensus 176 ----------tV~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~rk 245 (378)
T KOG1345|consen 176 ----------TVKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLKRK 245 (378)
T ss_pred ----------eehhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhccc
Confidence 12223345679999988642 35678999999999999999999996322 12222223333332
Q ss_pred chhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhh
Q 005227 602 MFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIW 650 (707)
Q Consensus 602 ~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~ 650 (707)
... .+..-.-..+...++..+-+..++++|-...++.++....+
T Consensus 246 ~~~-----~P~~F~~fs~~a~r~Fkk~lt~~~~drcki~~~kk~rk~~w 289 (378)
T KOG1345|consen 246 NPA-----LPKKFNPFSEKALRLFKKSLTPRFKDRCKIWTAKKMRKCLW 289 (378)
T ss_pred Ccc-----CchhhcccCHHHHHHHHHhcCCcccccchhHHHHHHHHHHH
Confidence 221 11111223456666777778888988866666655554443
No 404
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.92 E-value=8.7e-26 Score=267.65 Aligned_cols=201 Identities=19% Similarity=0.189 Sum_probs=133.5
Q ss_pred ccCC-CcceeEEEEE-------EeCCeEEEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeE
Q 005227 427 RLHH-RNLVSLVGYC-------DEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVF 498 (707)
Q Consensus 427 ~l~h-~nIv~l~~~~-------~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iv 498 (707)
.++| +||++++++| ......++++||+ +++|.++|... ...+++.+++.++.||++||+|||+++ |+
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~g---Iv 102 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNP-DRSVDAFECFHVFRQIVEIVNAAHSQG---IV 102 (793)
T ss_pred hhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcc-cccccHHHHHHHHHHHHHHHHHHHhCC---ee
Confidence 3455 5888888887 2234567788988 66999999653 345999999999999999999999999 99
Q ss_pred ecCCCCCCEEEcCCCc-------------------EEEeeecccccCCCCC---CC------CccccceecccccCCCcc
Q 005227 499 HRDIKASNILLDHKFT-------------------AKVADFGLSRLAPVPD---IE------GIVPAHVSTVVKGTPGYL 550 (707)
Q Consensus 499 H~Dlkp~NILl~~~~~-------------------~kl~DFGla~~~~~~~---~~------~~~~~~~~~~~~gt~~y~ 550 (707)
||||||+||||+..+. +|++|||+++...... .. ............||+.||
T Consensus 103 HrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~ 182 (793)
T PLN00181 103 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYT 182 (793)
T ss_pred eccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceE
Confidence 9999999999965444 4555555554321100 00 000000111245788999
Q ss_pred chhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcc
Q 005227 551 DPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQ 630 (707)
Q Consensus 551 aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~ 630 (707)
|||++.+..++.++|||||||+||||++|..|+............ .. .+............++.+|++
T Consensus 183 APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~~~~~~~~--------~~----~~~~~~~~~~~~~~~~~~~L~ 250 (793)
T PLN00181 183 SPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSRTMSSLRH--------RV----LPPQILLNWPKEASFCLWLLH 250 (793)
T ss_pred ChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHHHHHHHHH--------hh----cChhhhhcCHHHHHHHHHhCC
Confidence 999999999999999999999999999998876432211111100 00 001001112334456666777
Q ss_pred cCCCCCCCHHHHHH
Q 005227 631 DETDARPSMSEVMR 644 (707)
Q Consensus 631 ~~p~~RPt~~~v~~ 644 (707)
.+|.+||++.++++
T Consensus 251 ~~P~~Rps~~eil~ 264 (793)
T PLN00181 251 PEPSCRPSMSELLQ 264 (793)
T ss_pred CChhhCcChHHHhh
Confidence 77777777777654
No 405
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.91 E-value=2.9e-25 Score=213.08 Aligned_cols=245 Identities=19% Similarity=0.356 Sum_probs=197.1
Q ss_pred cceEeeeCceEEEEEEeCCCcEEEEEEeccCC--hhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEecCCCCC
Q 005227 380 STQIGQGGYGKVYKGILPDGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGT 457 (707)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gs 457 (707)
..+|.+...|..|+|+++ |..+++|++.-.. ....++|..|.-.|+-+.||||+.+++.|...-+..++..||+.|+
T Consensus 195 ~tkl~e~hsgelwrgrwq-gndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp~gs 273 (448)
T KOG0195|consen 195 ITKLAESHSGELWRGRWQ-GNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMPFGS 273 (448)
T ss_pred hhhhccCCCccccccccc-CcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeeccchH
Confidence 457889999999999995 4456667765432 2234679999999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEe--eecccccCCCCCCCCcc
Q 005227 458 LRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVA--DFGLSRLAPVPDIEGIV 535 (707)
Q Consensus 458 L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~--DFGla~~~~~~~~~~~~ 535 (707)
|+..|++...-..+..++.+++.++|+|++|||+.. +-|.---|.+..|++|++.+++|+ |--++..
T Consensus 274 lynvlhe~t~vvvd~sqav~faldiargmaflhsle-p~ipr~~lns~hvmidedltarismad~kfsfq---------- 342 (448)
T KOG0195|consen 274 LYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLE-PMIPRFYLNSKHVMIDEDLTARISMADTKFSFQ---------- 342 (448)
T ss_pred HHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcc-hhhhhhhcccceEEecchhhhheecccceeeee----------
Confidence 999999887777888999999999999999999975 445556789999999999988875 3222211
Q ss_pred ccceecccccCCCccchhhhccCCCC---CchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCCCCC
Q 005227 536 PAHVSTVVKGTPGYLDPEYFLTHKLT---DKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGS 612 (707)
Q Consensus 536 ~~~~~~~~~gt~~y~aPE~~~~~~~s---~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 612 (707)
.....-.+.||+||.++..+-+ .++|+|||++++||+-|...||.+.....-- +.-.+.+.+..
T Consensus 343 ----e~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecg---------mkialeglrv~ 409 (448)
T KOG0195|consen 343 ----EVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECG---------MKIALEGLRVH 409 (448)
T ss_pred ----ccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhh---------hhhhhcccccc
Confidence 1122346889999999876544 4699999999999999999999865553222 22234555666
Q ss_pred CChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 005227 613 YPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 649 (707)
Q Consensus 613 ~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~ 649 (707)
.|......+.+++.-|+++||.+||.+..++-.|+++
T Consensus 410 ippgis~hm~klm~icmnedpgkrpkfdmivpilekm 446 (448)
T KOG0195|consen 410 IPPGISRHMNKLMNICMNEDPGKRPKFDMIVPILEKM 446 (448)
T ss_pred CCCCccHHHHHHHHHHhcCCCCcCCCcceehhhHHHh
Confidence 7888889999999999999999999999999888765
No 406
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.91 E-value=7.9e-24 Score=204.23 Aligned_cols=168 Identities=21% Similarity=0.291 Sum_probs=125.7
Q ss_pred CCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCCCcc
Q 005227 456 GTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIV 535 (707)
Q Consensus 456 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 535 (707)
|+|.++++.. ...+++..++.++.|+++||+|||+++ ||+|||++.++.+|+ ||+++.....
T Consensus 1 GsL~~~l~~~-~~~l~~~~~~~i~~qi~~~L~~lH~~~---------kp~Nil~~~~~~~~~--fG~~~~~~~~------ 62 (176)
T smart00750 1 VSLADILEVR-GRPLNEEEIWAVCLQCLRALRELHRQA---------KSGNILLTWDGLLKL--DGSVAFKTPE------ 62 (176)
T ss_pred CcHHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhcC---------CcccEeEcCccceee--ccceEeeccc------
Confidence 6899999754 346999999999999999999999875 999999999999999 9998765321
Q ss_pred ccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCCCCCCCh
Q 005227 536 PAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPS 615 (707)
Q Consensus 536 ~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 615 (707)
...||+.|+|||++.+..++.++|||||||++|||++|+.||.................. . ........+.
T Consensus 63 ------~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~ 133 (176)
T smart00750 63 ------QSRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMP--A-DDPRDRSNLE 133 (176)
T ss_pred ------cCCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhc--c-CCccccccHH
Confidence 125789999999999999999999999999999999999999654332222221111000 0 0000011223
Q ss_pred HHHH--HHHHHHHHhcccCCCCCCCHHHHHHHHHHhh
Q 005227 616 ECVE--KFIKLALKCCQDETDARPSMSEVMRELESIW 650 (707)
Q Consensus 616 ~~~~--~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~ 650 (707)
.... .+.+++.+|++.+|++||++.++++.+....
T Consensus 134 ~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~ 170 (176)
T smart00750 134 SVSAARSFADFMRVCASRLPQRREAANHYLAHCRALF 170 (176)
T ss_pred HHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHHH
Confidence 3333 5888899999999999999998888776543
No 407
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.90 E-value=1.6e-23 Score=221.45 Aligned_cols=171 Identities=19% Similarity=0.203 Sum_probs=131.8
Q ss_pred HHHhcCCCccceEeeeCceEEEEEEeC--CCcEEEEEEeccC-----ChhhHHHHHHHHHHHHccCCCccee-EEEEEEe
Q 005227 371 ALATNNFNSSTQIGQGGYGKVYKGILP--DGTVVAVKRAQEG-----SLQGEKEFLTEIQFLSRLHHRNLVS-LVGYCDE 442 (707)
Q Consensus 371 ~~~~~~~~~~~~lG~G~fg~Vy~~~~~--~~~~vavK~l~~~-----~~~~~~~~~~E~~~l~~l~h~nIv~-l~~~~~~ 442 (707)
....++|...+.||+|+||+||+|.++ +++.||||++... .....+.+.+|+++|++++|+|+++ +++
T Consensus 14 ~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~---- 89 (365)
T PRK09188 14 PALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLA---- 89 (365)
T ss_pred ccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEE----
Confidence 445678999999999999999999864 5788899987533 1223456899999999999999985 443
Q ss_pred CCeEEEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCC-CCCCEEEcCCCcEEEeeec
Q 005227 443 EGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDI-KASNILLDHKFTAKVADFG 521 (707)
Q Consensus 443 ~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dl-kp~NILl~~~~~~kl~DFG 521 (707)
.+..++||||+++++|.. +.. .. ...++.++++||+|||+.+ |+|||| ||+|||++.++.+||+|||
T Consensus 90 ~~~~~LVmE~~~G~~L~~-~~~-----~~---~~~~~~~i~~aL~~lH~~g---IiHrDL~KP~NILv~~~~~ikLiDFG 157 (365)
T PRK09188 90 TGKDGLVRGWTEGVPLHL-ARP-----HG---DPAWFRSAHRALRDLHRAG---ITHNDLAKPQNWLMGPDGEAAVIDFQ 157 (365)
T ss_pred cCCcEEEEEccCCCCHHH-hCc-----cc---hHHHHHHHHHHHHHHHHCC---CeeCCCCCcceEEEcCCCCEEEEECc
Confidence 246799999999999963 211 11 1467889999999999998 999999 9999999999999999999
Q ss_pred ccccCCCCCCCCcccc-ceecccccCCCccchhhhcc
Q 005227 522 LSRLAPVPDIEGIVPA-HVSTVVKGTPGYLDPEYFLT 557 (707)
Q Consensus 522 la~~~~~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~ 557 (707)
+|+............. .......+++.|+|||++..
T Consensus 158 lA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~ 194 (365)
T PRK09188 158 LASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTP 194 (365)
T ss_pred cceecccCcchhhhhhhhhhhhhhccCccCCcccCCh
Confidence 9997754332111111 11245678889999999864
No 408
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.90 E-value=1.8e-22 Score=214.05 Aligned_cols=266 Identities=21% Similarity=0.269 Sum_probs=200.7
Q ss_pred CCCccceEeeeCceEEEEEEeCC--CcEEEEEEeccCChhhHHHHHHHHHHHHccCC----CcceeEEEEE-EeCCeEEE
Q 005227 376 NFNSSTQIGQGGYGKVYKGILPD--GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHH----RNLVSLVGYC-DEEGEQML 448 (707)
Q Consensus 376 ~~~~~~~lG~G~fg~Vy~~~~~~--~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h----~nIv~l~~~~-~~~~~~~l 448 (707)
+|.+.+.||+|+||.||.+...+ ...+|+|............+..|+.++..+.. +++..+++.. ......++
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~i 98 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFI 98 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEE
Confidence 79999999999999999999654 35788888765433332367788898888863 6899999999 57788999
Q ss_pred EEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCC-----CcEEEeeeccc
Q 005227 449 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHK-----FTAKVADFGLS 523 (707)
Q Consensus 449 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~-----~~~kl~DFGla 523 (707)
||+.+ |.+|.++........++..+...|+.|++.+|++||+.| ++||||||.|+++... ..+.+.|||++
T Consensus 99 VM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G---~iHRDiKp~N~~~g~~~~~~~~~~~llDfGla 174 (322)
T KOG1164|consen 99 VMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKG---FIHRDIKPENFVVGQSSRSEVRTLYLLDFGLA 174 (322)
T ss_pred EEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcC---cccCCcCHHHeeecCCCCcccceEEEEecCCC
Confidence 99988 889999887666678999999999999999999999999 9999999999999754 46999999999
Q ss_pred ccCC--CCCCCCccccce-ecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchh--HHHHHHHhh
Q 005227 524 RLAP--VPDIEGIVPAHV-STVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNI--VREVNIAYQ 598 (707)
Q Consensus 524 ~~~~--~~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~~~~--~~~~~~~~~ 598 (707)
+... ..+.....+... .....||..|.++....+...+.+.|+||++.++.|++.|..|+...... ...+.....
T Consensus 175 r~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~~~~~~ 254 (322)
T KOG1164|consen 175 RRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLKSKFEKDPR 254 (322)
T ss_pred ccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccchHHHHHHHhh
Confidence 8433 222111011111 23456999999999999999999999999999999999999998543321 111111111
Q ss_pred cccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcC
Q 005227 599 SSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMM 653 (707)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~ 653 (707)
... ... .....+.++.++...+-..+...+|....+...++......
T Consensus 255 ~~~----~~~----~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~~~~ 301 (322)
T KOG1164|consen 255 KLL----TDR----FGDLKPEEFAKILEYIDSLDYEDKPDYEKLAELLKDVFDSE 301 (322)
T ss_pred hhc----ccc----ccCCChHHHHHHHHHhhccCCcCCCCHHHHHHHHHHHHHhc
Confidence 100 000 22233455666666666689999999999998887766543
No 409
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.88 E-value=1.9e-21 Score=192.18 Aligned_cols=272 Identities=19% Similarity=0.280 Sum_probs=206.5
Q ss_pred cCCCccceEeeeCceEEEEEE-eCCCcEEEEEEeccCChhhHHHHHHHHHHHHcc-CCCcceeEEEEEEeCCeEEEEEec
Q 005227 375 NNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQMLVYEF 452 (707)
Q Consensus 375 ~~~~~~~~lG~G~fg~Vy~~~-~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lV~E~ 452 (707)
-.|.+.++||+|.||..+.|+ +-+++.||||.-...+ ...++..|.+.++.+ ..+.|...+-+.....+-.||+|.
T Consensus 28 ~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS--~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVidL 105 (449)
T KOG1165|consen 28 PHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKS--EAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVIDL 105 (449)
T ss_pred ccceeccccccCcceeeecccccccCceEEEEeccccC--CcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhhh
Confidence 368899999999999999999 5689999999865433 234778899999888 578999988888888899999999
Q ss_pred CCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcC-----CCcEEEeeecccccCC
Q 005227 453 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDH-----KFTAKVADFGLSRLAP 527 (707)
Q Consensus 453 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~-----~~~~kl~DFGla~~~~ 527 (707)
+ |.+|.|+..-.+ ..++..++.-+|.|++.-++|+|++. +|.|||||+|.||.. ...+.|+|||+|+.+.
T Consensus 106 L-GPSLEDLFD~Cg-R~FSvKTV~miA~Qmi~rie~vH~k~---LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~Yr 180 (449)
T KOG1165|consen 106 L-GPSLEDLFDLCG-RRFSVKTVAMIAKQMITRIEYVHEKD---LIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYR 180 (449)
T ss_pred h-CcCHHHHHHHhc-CcccHHhHHHHHHHHHHHHHHHHhcc---eeecccCccceeecCCCCCCCceEEEEeccchhhhc
Confidence 9 889999886544 46999999999999999999999999 999999999999964 3468999999999887
Q ss_pred CCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCc--hhHHHHHHHhhcccchhh
Q 005227 528 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK--NIVREVNIAYQSSMMFSV 605 (707)
Q Consensus 528 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~~--~~~~~~~~~~~~~~~~~~ 605 (707)
.++...-.+-.......||.+||+---..+...+.+-|+-|+|-+++..+.|..||..-. ..-+..+. +
T Consensus 181 Dp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK~kYeK---------I 251 (449)
T KOG1165|consen 181 DPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADTNKEKYEK---------I 251 (449)
T ss_pred CccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCcchHHHHHH---------h
Confidence 766544444455566789999999999999999999999999999999999999996422 11111111 1
Q ss_pred ccCCCCC----CChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCc
Q 005227 606 IDGNMGS----YPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPE 662 (707)
Q Consensus 606 ~~~~~~~----~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~d 662 (707)
-+.+... .-+..+.++..-+...=..+-++-|..+-+...+.+.++.....++...|
T Consensus 252 Ge~Kr~T~i~~Lc~g~P~efa~Yl~yvR~L~F~E~PDYdylr~Lf~dvldr~g~t~Dg~yD 312 (449)
T KOG1165|consen 252 GETKRSTPIEVLCEGFPEEFATYLRYVRRLDFFETPDYDYLRKLFDDVLDRLGETDDGEYD 312 (449)
T ss_pred ccccccCCHHHHHhcCHHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHhcCCccccccc
Confidence 1111111 11223444444444444556677788877777777776666555554444
No 410
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.88 E-value=4.6e-24 Score=240.17 Aligned_cols=264 Identities=20% Similarity=0.263 Sum_probs=189.5
Q ss_pred CccceEeeeCceEEEEEEeC-CCcEEEEEEec----c-CChh-hHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEE
Q 005227 378 NSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQ----E-GSLQ-GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 450 (707)
Q Consensus 378 ~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~----~-~~~~-~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~ 450 (707)
...+.+|.|++|.|+..... ..+.++.|... . .... ....+..|+-+-..+.|+|++..+..+.+.....-+|
T Consensus 321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~m 400 (601)
T KOG0590|consen 321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSM 400 (601)
T ss_pred CccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhh
Confidence 34678999999988877743 34444444332 1 1111 1223667888888899999988777666665555569
Q ss_pred ecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCC
Q 005227 451 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 530 (707)
Q Consensus 451 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~ 530 (707)
|||++ +|..++... ..+....+..++.|++.|++|+|+.+ |.|||+|++|++++.+|.+||+|||.+.....+.
T Consensus 401 E~~~~-Dlf~~~~~~--~~~~~~e~~c~fKqL~~Gv~y~h~~G---iahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~ 474 (601)
T KOG0590|consen 401 EYCPY-DLFSLVMSN--GKLTPLEADCFFKQLLRGVKYLHSMG---LAHRDLKLENLLVTENGILKIIDFGAASVFRYPW 474 (601)
T ss_pred hcccH-HHHHHHhcc--cccchhhhhHHHHHHHHHHHHHHhcC---ceeccCccccEEEecCCceEEeecCcceeeccCc
Confidence 99999 999999654 34788889999999999999999999 9999999999999999999999999997765433
Q ss_pred CCCccccceecccccCCCccchhhhccCCCCCc-hhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCC
Q 005227 531 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDK-SDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGN 609 (707)
Q Consensus 531 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~-sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 609 (707)
.. ........+|+..|+|||++.+..|+.. .||||.|+++..|++|+.||.......+...
T Consensus 475 e~---~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~--------------- 536 (601)
T KOG0590|consen 475 EK---NIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFK--------------- 536 (601)
T ss_pred ch---hhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchh---------------
Confidence 11 1244566789999999999999999875 8999999999999999999864332111100
Q ss_pred CCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCCCCCCCCC
Q 005227 610 MGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSS 689 (707)
Q Consensus 610 ~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f~~ 689 (707)
+- ....-..+..-.+.++..++. .....|.+||++||++|+|++++++++||..
T Consensus 537 ------------------~~-----~~~~~~~~~~~~~~~~~~lp~---~~~~~~~~~l~~~P~~R~ti~~i~~d~W~~~ 590 (601)
T KOG0590|consen 537 ------------------TN-----NYSDQRNIFEGPNRLLSLLPR---ETRIIIYRMLQLDPTKRITIEQILNDEWIRS 590 (601)
T ss_pred ------------------hh-----ccccccccccChHHHHHhchh---hHHHHHHHHccCChhheecHHHHhhChHhhh
Confidence 00 000000011111122222222 2236889999999999999999999999976
Q ss_pred CC
Q 005227 690 DV 691 (707)
Q Consensus 690 ~~ 691 (707)
-.
T Consensus 591 i~ 592 (601)
T KOG0590|consen 591 IE 592 (601)
T ss_pred cc
Confidence 43
No 411
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.88 E-value=1.4e-20 Score=198.50 Aligned_cols=262 Identities=32% Similarity=0.489 Sum_probs=198.1
Q ss_pred CCccceEeeeCceEEEEEEeCCCcEEEEEEeccCChh---hHHHHHHHHHHHHccCCC-cceeEEEEEEeCCeEEEEEec
Q 005227 377 FNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQ---GEKEFLTEIQFLSRLHHR-NLVSLVGYCDEEGEQMLVYEF 452 (707)
Q Consensus 377 ~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~---~~~~~~~E~~~l~~l~h~-nIv~l~~~~~~~~~~~lV~E~ 452 (707)
|...+.||.|+||.||++... ..+++|.+...... ....+.+|+.+++.+.|+ +++++.+.+......+++++|
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 79 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEY 79 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEec
Confidence 667889999999999999986 78999988764333 356899999999999988 799999999777778999999
Q ss_pred CCCCCHHHHHhhcCC-CCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCC-cEEEeeecccccCCCCC
Q 005227 453 MSNGTLRDQLSAKSK-EPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKF-TAKVADFGLSRLAPVPD 530 (707)
Q Consensus 453 ~~~gsL~~~l~~~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~-~~kl~DFGla~~~~~~~ 530 (707)
+.++++.+++..... ..+.......+..|++.++.|+|+.+ ++|||+||+||+++..+ .++++|||.++......
T Consensus 80 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~---~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~ 156 (384)
T COG0515 80 VDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKG---IIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPG 156 (384)
T ss_pred CCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeeecCCCCeEEEeccCcceecCCCC
Confidence 999999977754332 26889999999999999999999999 99999999999999988 79999999998554322
Q ss_pred CCCccccceecccccCCCccchhhhcc---CCCCCchhhHHHHHHHHHHHcCCCCCCCCch---hHHHHHHHhhcccchh
Q 005227 531 IEGIVPAHVSTVVKGTPGYLDPEYFLT---HKLTDKSDVYSLGVVFLELLTGMQPISHGKN---IVREVNIAYQSSMMFS 604 (707)
Q Consensus 531 ~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~s~~sDVwSlGvll~elltG~~pf~~~~~---~~~~~~~~~~~~~~~~ 604 (707)
..... ........|+..|+|||.+.+ ..++...|+||+|++++++++|..||..... ............. ..
T Consensus 157 ~~~~~-~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~-~~ 234 (384)
T COG0515 157 STSSI-PALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPT-PS 234 (384)
T ss_pred ccccc-cccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCC-cc
Confidence 11000 013456779999999999988 5788899999999999999999999765443 1111111111110 00
Q ss_pred hccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 005227 605 VIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRE 645 (707)
Q Consensus 605 ~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~ 645 (707)
................+.+++..|+..+|..|.+..+....
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 235 LASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred cccccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 00000000012223577888999999999999988876654
No 412
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.87 E-value=1.1e-21 Score=185.75 Aligned_cols=271 Identities=20% Similarity=0.273 Sum_probs=201.7
Q ss_pred HhcCCCccceEeeeCceEEEEEE-eCCCcEEEEEEeccCChhhHHHHHHHHHHHHccCC-CcceeEEEEEEeCCeEEEEE
Q 005227 373 ATNNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHH-RNLVSLVGYCDEEGEQMLVY 450 (707)
Q Consensus 373 ~~~~~~~~~~lG~G~fg~Vy~~~-~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h-~nIv~l~~~~~~~~~~~lV~ 450 (707)
..++|...++||.|+||.+|.|. ..+|..||||.-..... ..++..|.++.+.+++ ..|..+.-+..+...-.+||
T Consensus 13 v~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~--hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVM 90 (341)
T KOG1163|consen 13 VGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAK--HPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVM 90 (341)
T ss_pred eccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCC--CcchhHHHHHHHHhccCCCCchhhhhccccccceeee
Confidence 34689999999999999999999 67899999998765332 2467789999999975 66777788888888999999
Q ss_pred ecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcC---CCcEEEeeecccccCC
Q 005227 451 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDH---KFTAKVADFGLSRLAP 527 (707)
Q Consensus 451 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~---~~~~kl~DFGla~~~~ 527 (707)
|.+ |.+|.++..-.. ..++..+++-+|-|++.-++|+|.++ +|||||||+|.|..- ...+.++|||+|+.+.
T Consensus 91 dLL-GPsLEdLfnfC~-R~ftmkTvLMLaDQml~RiEyvH~r~---fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~ 165 (341)
T KOG1163|consen 91 DLL-GPSLEDLFNFCS-RRFTMKTVLMLADQMLSRIEYVHLRN---FIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYR 165 (341)
T ss_pred ecc-CccHHHHHHHHh-hhhhHHhHHHHHHHHHHHHHHHHhhc---cccccCCccceeeccccccceEEEEeccchhhhc
Confidence 998 889999886543 35899999999999999999999999 999999999999963 3568999999998775
Q ss_pred CCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHH-HHHHHhhcccchhhc
Q 005227 528 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVR-EVNIAYQSSMMFSVI 606 (707)
Q Consensus 528 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~-~~~~~~~~~~~~~~~ 606 (707)
......-.+-.......||.+|.+--...+...+.+-|+-|+|.+|..+-.|..||..-..... +..+...+..+...+
T Consensus 166 d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QKyEkI~EkK~s~~i 245 (341)
T KOG1163|consen 166 DIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQKYEKISEKKMSTPI 245 (341)
T ss_pred cccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhhHHHHHHHHHHhhcCCCH
Confidence 4433333334445567799999998888888888999999999999999999999975332111 111111111111111
Q ss_pred cCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCC
Q 005227 607 DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMP 654 (707)
Q Consensus 607 ~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~ 654 (707)
.... ...+.++.-.+..|-...-++.|...-+.+.+..++..+-
T Consensus 246 e~LC----~G~P~EF~myl~Y~R~L~F~E~Pdy~ylrqlFriLfr~ln 289 (341)
T KOG1163|consen 246 EVLC----KGFPAEFAMYLNYCRGLGFEEKPDYMYLRQLFRILFRTLN 289 (341)
T ss_pred HHHh----CCCcHHHHHHHHHHhhcCCCCCCcHHHHHHHHHHHHhhcc
Confidence 1111 2234556666777877777888888776666666555443
No 413
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.84 E-value=5.2e-21 Score=188.29 Aligned_cols=170 Identities=15% Similarity=0.106 Sum_probs=134.2
Q ss_pred hcCCCccceEeeeCceEEEEEEeCCCcEEEEEEeccCChhhHHH---------HHHHHHHHHccCCCcceeEEEEEEeC-
Q 005227 374 TNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKE---------FLTEIQFLSRLHHRNLVSLVGYCDEE- 443 (707)
Q Consensus 374 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~---------~~~E~~~l~~l~h~nIv~l~~~~~~~- 443 (707)
.++|...+.+|.|+||.||.+.. ++..+|||.+.......+.. +.+|++.+.++.|++|..+.+++...
T Consensus 30 ~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~~ 108 (232)
T PRK10359 30 SYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLAE 108 (232)
T ss_pred hCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeecc
Confidence 68999999999999999999766 57789999997644333322 67899999999999999999886543
Q ss_pred -------CeEEEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEE
Q 005227 444 -------GEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAK 516 (707)
Q Consensus 444 -------~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~k 516 (707)
+..++||||++|.+|.++.. ++. ....+++.+|..+|+.+ ++|||+||+||++++++ ++
T Consensus 109 ~~~~~~~~~~~lvmEyi~G~tL~~~~~------~~~----~~~~~i~~~l~~lH~~g---i~H~Dikp~Nili~~~g-i~ 174 (232)
T PRK10359 109 RKTLRYAHTYIMLIEYIEGVELNDMPE------ISE----DVKAKIKASIESLHQHG---MVSGDPHKGNFIVSKNG-LR 174 (232)
T ss_pred cccccccCCeEEEEEEECCccHHHhhh------ccH----HHHHHHHHHHHHHHHcC---CccCCCChHHEEEeCCC-EE
Confidence 35789999999999988741 222 24568999999999999 99999999999999988 99
Q ss_pred EeeecccccCCCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHH
Q 005227 517 VADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELL 577 (707)
Q Consensus 517 l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~ell 577 (707)
++|||.......... ...+.....+..++|+|+||+++.-..
T Consensus 175 liDfg~~~~~~e~~a-------------------~d~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 175 IIDLSGKRCTAQRKA-------------------KDRIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred EEECCCcccccchhh-------------------HHHHHHHhHhcccccccceeEeehHHH
Confidence 999998865432110 011444556778999999999987654
No 414
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.84 E-value=1.1e-20 Score=183.82 Aligned_cols=139 Identities=19% Similarity=0.155 Sum_probs=108.8
Q ss_pred cceEeeeCceEEEEEEeCCCcEEEEEEeccCChh--h------------------------HHHHHHHHHHHHccCCCcc
Q 005227 380 STQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQ--G------------------------EKEFLTEIQFLSRLHHRNL 433 (707)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~--~------------------------~~~~~~E~~~l~~l~h~nI 433 (707)
...||+|+||.||+|...+|+.||||+++..... . ......|++.+.++.++++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v 81 (190)
T cd05147 2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI 81 (190)
T ss_pred CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 4679999999999999889999999998753211 0 1123459999999988776
Q ss_pred eeEEEEEEeCCeEEEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHH-HhCCCCCeEecCCCCCCEEEcCC
Q 005227 434 VSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYL-HTEADPPVFHRDIKASNILLDHK 512 (707)
Q Consensus 434 v~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yL-H~~~~~~ivH~Dlkp~NILl~~~ 512 (707)
.....+.. ...++||||++++++...... ...+++.....++.|++.+|.|+ |+.+ |+||||||+|||++ +
T Consensus 82 ~~p~~~~~--~~~~iVmE~i~g~~l~~~~~~--~~~~~~~~~~~i~~qi~~~L~~l~H~~g---iiHrDlkP~NIli~-~ 153 (190)
T cd05147 82 PCPEPILL--KSHVLVMEFIGDDGWAAPRLK--DAPLSESKARELYLQVIQIMRILYQDCR---LVHADLSEYNLLYH-D 153 (190)
T ss_pred CCCcEEEe--cCCEEEEEEeCCCCCcchhhh--cCCCCHHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEE-C
Confidence 44333322 223899999988777654322 23588999999999999999999 6888 99999999999998 4
Q ss_pred CcEEEeeecccccC
Q 005227 513 FTAKVADFGLSRLA 526 (707)
Q Consensus 513 ~~~kl~DFGla~~~ 526 (707)
+.++|+|||+|...
T Consensus 154 ~~v~LiDFG~a~~~ 167 (190)
T cd05147 154 GKLYIIDVSQSVEH 167 (190)
T ss_pred CcEEEEEccccccC
Confidence 78999999999754
No 415
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.83 E-value=6.7e-22 Score=221.37 Aligned_cols=253 Identities=20% Similarity=0.238 Sum_probs=178.4
Q ss_pred CCCccceEeeeCceEEEEEEeCCCcEEEEEEeccCC-hhhHHHHH---HHHHHHHccCCCcceeEEEEEEeCCeEEEEEe
Q 005227 376 NFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGS-LQGEKEFL---TEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 451 (707)
Q Consensus 376 ~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~-~~~~~~~~---~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E 451 (707)
+|...+.||.+.|=+|.+|++++|. |+||++-... ....+.|. .|++ ...++|||.+++.-+-...+..|||=+
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~t~kAAylvRq 101 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLVTDKAAYLVRQ 101 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHHhhHHHHHHHH
Confidence 5667889999999999999998887 8888876543 22233443 4444 555689999999888777778889999
Q ss_pred cCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCC
Q 005227 452 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 531 (707)
Q Consensus 452 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 531 (707)
|+.+ +|+|.+. .+.-+...+.++|+.|++.||.-+|..+ |+|||||.+||||+.-.-+.|+||..-+...-++.
T Consensus 102 yvkh-nLyDRlS--TRPFL~~iEKkWiaFQLL~al~qcH~~g---VcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeD 175 (1431)
T KOG1240|consen 102 YVKH-NLYDRLS--TRPFLVLIEKKWIAFQLLKALSQCHKLG---VCHGDIKSENILITSWNWLYLTDFASFKPTYLPED 175 (1431)
T ss_pred HHhh-hhhhhhc--cchHHHHHHHHHHHHHHHHHHHHHHHcC---ccccccccceEEEeeechhhhhcccccCCccCCCC
Confidence 9955 9999984 3445788899999999999999999999 99999999999999999999999987654322211
Q ss_pred CCccccceecccccCCCccchhhhccC----------C-CCCchhhHHHHHHHHHHHc-CCCCCCCCchhHHHHHH-Hhh
Q 005227 532 EGIVPAHVSTVVKGTPGYLDPEYFLTH----------K-LTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNI-AYQ 598 (707)
Q Consensus 532 ~~~~~~~~~~~~~gt~~y~aPE~~~~~----------~-~s~~sDVwSlGvll~ellt-G~~pf~~~~~~~~~~~~-~~~ 598 (707)
+.............-.+|+|||.+... . .+++.||||+||++.||++ |+++|.-. .+...-.. ...
T Consensus 176 NPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LS-QL~aYr~~~~~~ 254 (1431)
T KOG1240|consen 176 NPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLS-QLLAYRSGNADD 254 (1431)
T ss_pred CcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHH-HHHhHhccCccC
Confidence 111111222223344589999998542 1 5678999999999999999 77777421 11000000 000
Q ss_pred cccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 005227 599 SSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELE 647 (707)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~ 647 (707)
.+...+. .. ...+..++..|++.+|..|-++++.++.-.
T Consensus 255 ~e~~Le~-------Ie---d~~~Rnlil~Mi~rdPs~RlSAedyL~~yr 293 (1431)
T KOG1240|consen 255 PEQLLEK-------IE---DVSLRNLILSMIQRDPSKRLSAEDYLQKYR 293 (1431)
T ss_pred HHHHHHh-------Cc---CccHHHHHHHHHccCchhccCHHHHHHhhh
Confidence 0000000 01 125678888889999999999988877644
No 416
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.82 E-value=1.7e-19 Score=176.16 Aligned_cols=139 Identities=20% Similarity=0.155 Sum_probs=111.1
Q ss_pred cceEeeeCceEEEEEEeCCCcEEEEEEeccCChh---------------------h-----HHHHHHHHHHHHccCCCcc
Q 005227 380 STQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQ---------------------G-----EKEFLTEIQFLSRLHHRNL 433 (707)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~---------------------~-----~~~~~~E~~~l~~l~h~nI 433 (707)
...||+|+||.||+|...+|+.||||++...... . ...+..|.+.+.++.|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 81 (190)
T cd05145 2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV 81 (190)
T ss_pred CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 5689999999999999878999999998754211 0 1224678999999999987
Q ss_pred eeEEEEEEeCCeEEEEEecCCCCCHHHH-HhhcCCCCcCHHHHHHHHHHHHHHHHHHHh-CCCCCeEecCCCCCCEEEcC
Q 005227 434 VSLVGYCDEEGEQMLVYEFMSNGTLRDQ-LSAKSKEPLGFAMRLSIALGSSRGILYLHT-EADPPVFHRDIKASNILLDH 511 (707)
Q Consensus 434 v~l~~~~~~~~~~~lV~E~~~~gsL~~~-l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~ivH~Dlkp~NILl~~ 511 (707)
.....+... ..++||||++++++... +.. ..++......++.|++.++.++|+ .+ |+||||||+||+++
T Consensus 82 ~~p~~~~~~--~~~lVmE~~~g~~~~~~~l~~---~~~~~~~~~~i~~~l~~~l~~lH~~~g---ivHrDlkP~NIll~- 152 (190)
T cd05145 82 PVPEPILLK--KNVLVMEFIGDDGSPAPRLKD---VPLEEEEAEELYEQVVEQMRRLYQEAG---LVHGDLSEYNILYH- 152 (190)
T ss_pred CCceEEEec--CCEEEEEEecCCCchhhhhhh---ccCCHHHHHHHHHHHHHHHHHHHHhCC---EecCCCChhhEEEE-
Confidence 554444333 24899999988865443 322 347788899999999999999999 88 99999999999999
Q ss_pred CCcEEEeeecccccCC
Q 005227 512 KFTAKVADFGLSRLAP 527 (707)
Q Consensus 512 ~~~~kl~DFGla~~~~ 527 (707)
++.++|+|||++....
T Consensus 153 ~~~~~liDFG~a~~~~ 168 (190)
T cd05145 153 DGKPYIIDVSQAVELD 168 (190)
T ss_pred CCCEEEEEcccceecC
Confidence 8899999999998654
No 417
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.82 E-value=1.5e-21 Score=209.33 Aligned_cols=223 Identities=26% Similarity=0.293 Sum_probs=172.1
Q ss_pred eEeeeCceEEEEEE----eCCCcEEEEEEeccCChhh--HHHHHHHHHHHHccC-CCcceeEEEEEEeCCeEEEEEecCC
Q 005227 382 QIGQGGYGKVYKGI----LPDGTVVAVKRAQEGSLQG--EKEFLTEIQFLSRLH-HRNLVSLVGYCDEEGEQMLVYEFMS 454 (707)
Q Consensus 382 ~lG~G~fg~Vy~~~----~~~~~~vavK~l~~~~~~~--~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~~lV~E~~~ 454 (707)
.+|+|+||.|+.+. .+.|..+|.|.+....... ......|..++...+ ||.+|++...++.+...+++++|..
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~r 80 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLR 80 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcc
Confidence 37899999999765 2357788998877543222 124456788888886 9999999999999999999999999
Q ss_pred CCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCCCc
Q 005227 455 NGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGI 534 (707)
Q Consensus 455 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 534 (707)
+|.|...+.. ...+.+.....+...++-+++++|+.+ |+|||+|++||+++.+|.+|+.|||+++..-..+
T Consensus 81 gg~lft~l~~--~~~f~~~~~~~~~aelaLald~lh~l~---iiyrd~k~enilld~~Ghi~~tdfglske~v~~~---- 151 (612)
T KOG0603|consen 81 GGDLFTRLSK--EVMFDELDVAFYLAELALALDHLHKLG---IAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEK---- 151 (612)
T ss_pred cchhhhcccc--CCchHHHHHHHHHHHHHHHHhhcchhH---HHHhcccccceeecccCccccCCchhhhHhHhhh----
Confidence 9999888754 344777777888888999999999999 9999999999999999999999999998754322
Q ss_pred cccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCCCCCCC
Q 005227 535 VPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYP 614 (707)
Q Consensus 535 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 614 (707)
..+||..|||||++. ....++|.||||++++||+||..||.. + ... .+-+.-...|
T Consensus 152 -------~~cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~--~---~~~----------~Il~~~~~~p 207 (612)
T KOG0603|consen 152 -------IACGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG--D---TMK----------RILKAELEMP 207 (612)
T ss_pred -------hcccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch--H---HHH----------HHhhhccCCc
Confidence 128999999999998 677899999999999999999999964 1 111 1111122345
Q ss_pred hHHHHHHHHHHHHhcccCCCCCC
Q 005227 615 SECVEKFIKLALKCCQDETDARP 637 (707)
Q Consensus 615 ~~~~~~l~~l~~~c~~~~p~~RP 637 (707)
.+.+....+++......+|..|-
T Consensus 208 ~~l~~~a~~~~~~l~~r~p~nrL 230 (612)
T KOG0603|consen 208 RELSAEARSLFRQLFKRNPENRL 230 (612)
T ss_pred hhhhHHHHHHHHHHHhhCHHHHh
Confidence 55555555555555555555553
No 418
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.82 E-value=1.9e-19 Score=173.35 Aligned_cols=191 Identities=13% Similarity=0.051 Sum_probs=141.3
Q ss_pred CccceEeeeCceEEEEEEeCCCcEEEEEEeccCChhh----HHHHHHHHHHHHccC-CCcceeEEEEEEeCCeEEEEEec
Q 005227 378 NSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQG----EKEFLTEIQFLSRLH-HRNLVSLVGYCDEEGEQMLVYEF 452 (707)
Q Consensus 378 ~~~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~----~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~~lV~E~ 452 (707)
.+...|++|+||+||.+.. .+..++.+.+....... ...+.+|+++|+++. |+++.+++++ +..+++|||
T Consensus 5 ~~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmey 79 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSY 79 (218)
T ss_pred ccceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEee
Confidence 3567899999999997766 67888888776644322 125789999999995 5889999886 346999999
Q ss_pred CCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCC-CCCCEEEcCCCcEEEeeecccccCCCCCC
Q 005227 453 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDI-KASNILLDHKFTAKVADFGLSRLAPVPDI 531 (707)
Q Consensus 453 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dl-kp~NILl~~~~~~kl~DFGla~~~~~~~~ 531 (707)
++|.+|.+.+.. ....++.|++++|+++|+.+ |+|||| ||+|||++.++.++|+|||+|........
T Consensus 80 I~G~~L~~~~~~---------~~~~~~~qi~~~L~~lH~~G---IvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~ 147 (218)
T PRK12274 80 LAGAAMYQRPPR---------GDLAYFRAARRLLQQLHRCG---VAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRAR 147 (218)
T ss_pred ecCccHHhhhhh---------hhHHHHHHHHHHHHHHHHCc---CccCCCCCcceEEEcCCCCEEEEECCCceecCCcch
Confidence 999998754421 11346789999999999999 999999 79999999999999999999985443210
Q ss_pred C------CccccceecccccCCCccchhhhcc-CCCC-CchhhHHHHHHHHHHHcCCCCCCC
Q 005227 532 E------GIVPAHVSTVVKGTPGYLDPEYFLT-HKLT-DKSDVYSLGVVFLELLTGMQPISH 585 (707)
Q Consensus 532 ~------~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s-~~sDVwSlGvll~elltG~~pf~~ 585 (707)
. .....-.......++.|++|+...- ...+ ...+.++-|+-+|.++|+..+...
T Consensus 148 ~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~ 209 (218)
T PRK12274 148 WMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWE 209 (218)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccc
Confidence 0 0000000112346788888876543 2334 467899999999999999887643
No 419
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.81 E-value=6.6e-20 Score=197.21 Aligned_cols=217 Identities=26% Similarity=0.411 Sum_probs=162.1
Q ss_pred HHccCCCcceeEEEEEEeCCeEEEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCC
Q 005227 425 LSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKA 504 (707)
Q Consensus 425 l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp 504 (707)
|+.+.|.|+.+++|.+.+....+.|.+||..|+|.|.+.. ....+++.....++++|+.||+|||... -..|+.+++
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~-~~~~~d~~F~~s~~rdi~~Gl~ylh~s~--i~~hg~l~s 77 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSN-EDIKLDYFFILSFIRDISKGLAYLHNSP--IGYHGALKS 77 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhc-cccCccHHHHHHHHHHHHHHHHHHhcCc--ceeeeeecc
Confidence 4578999999999999999999999999999999999976 3456999999999999999999999855 239999999
Q ss_pred CCEEEcCCCcEEEeeecccccCCCCCCCCccccceecccccCCCccchhhhccC-------CCCCchhhHHHHHHHHHHH
Q 005227 505 SNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTH-------KLTDKSDVYSLGVVFLELL 577 (707)
Q Consensus 505 ~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-------~~s~~sDVwSlGvll~ell 577 (707)
+|+++|....+|++|||+......... ........-..-|.|||.+... ..+.+.||||||++++|++
T Consensus 78 ~nClvd~~w~lklt~~Gl~~~~~~~~~-----~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~ 152 (484)
T KOG1023|consen 78 SNCLVDSRWVLKLTDFGLNSLLEETAE-----PEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEIL 152 (484)
T ss_pred ccceeeeeEEEEechhhhccccccccc-----ccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHH
Confidence 999999999999999999877642100 0011111234569999999763 1467799999999999999
Q ss_pred cCCCCCCCCchhHHHHHHHhhcccchhhccCCCCCCC-h-HHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 005227 578 TGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYP-S-ECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 651 (707)
Q Consensus 578 tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~ 651 (707)
+.+.||.......+..+....... .-....++... . +..+.+..++..||..+|..||++.++...++.+..
T Consensus 153 ~r~~~~~~~~~~~~~~eii~~~~~--~~~~~~rP~i~~~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~~ 226 (484)
T KOG1023|consen 153 FRSGPFDLRNLVEDPDEIILRVKK--GGSNPFRPSIELLNELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTINK 226 (484)
T ss_pred hccCccccccccCChHHHHHHHHh--cCCCCcCcchhhhhhcchHHHHHHHHhcccChhhCccHHHHHhhhhhhcc
Confidence 999999754332221111111000 00001111111 1 445579999999999999999999999887776554
No 420
>PRK10345 hypothetical protein; Provisional
Probab=99.78 E-value=2.3e-18 Score=169.25 Aligned_cols=137 Identities=17% Similarity=0.223 Sum_probs=107.3
Q ss_pred CCccceEeeeCceEEEEEEeCCCcEEEEEEeccCChhhHHHHHHHHHHHHcc-----CCCcceeEEEEEEeCC---e-EE
Q 005227 377 FNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-----HHRNLVSLVGYCDEEG---E-QM 447 (707)
Q Consensus 377 ~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l-----~h~nIv~l~~~~~~~~---~-~~ 447 (707)
++..+.||+|+||.||. +++....+||+.........+.+.+|+++++.+ .||||++++|++.++. . ..
T Consensus 4 L~~~~~LG~G~~~~Vy~--hp~~~~k~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~ 81 (210)
T PRK10345 4 LSEQSPLGTGRHRKCYA--HPEDAQRCIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYD 81 (210)
T ss_pred cCCcceecCCCceEEEE--CCCCcCeEEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEE
Confidence 44578899999999996 443333479988765444567899999999999 5799999999998873 3 34
Q ss_pred EEEec--CCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHH-HHHHhCCCCCeEecCCCCCCEEEcC----CCcEEEeee
Q 005227 448 LVYEF--MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGI-LYLHTEADPPVFHRDIKASNILLDH----KFTAKVADF 520 (707)
Q Consensus 448 lV~E~--~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL-~yLH~~~~~~ivH~Dlkp~NILl~~----~~~~kl~DF 520 (707)
+|+|| +.+|+|.+++.+. .+++. ..++.+++.++ +|||+++ |+||||||+|||++. +..++|+||
T Consensus 82 ~I~e~~G~~~~tL~~~l~~~---~~~e~--~~~~~~~L~~l~~yLh~~~---IvhrDlKp~NILl~~~~~~~~~~~LiDg 153 (210)
T PRK10345 82 VIADFDGKPSITLTEFAEQC---RYEED--VAQLRQLLKKLKRYLLDNR---IVTMELKPQNILCQRISESEVIPVVCDN 153 (210)
T ss_pred EEecCCCCcchhHHHHHHcc---cccHh--HHHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEeccCCCCCcEEEEEC
Confidence 78999 5579999999653 25554 35577888777 9999999 999999999999974 348999995
Q ss_pred ccc
Q 005227 521 GLS 523 (707)
Q Consensus 521 Gla 523 (707)
+.+
T Consensus 154 ~G~ 156 (210)
T PRK10345 154 IGE 156 (210)
T ss_pred CCC
Confidence 433
No 421
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.78 E-value=1.3e-18 Score=199.55 Aligned_cols=253 Identities=23% Similarity=0.273 Sum_probs=183.1
Q ss_pred HHHHHhcCCCccceEeeeCceEEEEEEeCCCcEEEEEEeccCChhhHHHHHHHHHHHHccC---CCcceeEEEEEEeCCe
Q 005227 369 EMALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLH---HRNLVSLVGYCDEEGE 445 (707)
Q Consensus 369 ~l~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~---h~nIv~l~~~~~~~~~ 445 (707)
+.++..+.|.+.+.||+|+||+||+|...+|+.||+|+-+..+... |.-=.+++.+|+ -+.|+.+...+...+.
T Consensus 692 ~~~~~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~WE---fYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~ 768 (974)
T KOG1166|consen 692 EFEVGGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPWE---FYICLQVMERLKPQMLPSIMHISSAHVFQNA 768 (974)
T ss_pred eeeecceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCcee---eeehHHHHHhhchhhhcchHHHHHHHccCCc
Confidence 5566677899999999999999999998889999999887655432 111122333333 2345555555566778
Q ss_pred EEEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEc-------CCCcEEEe
Q 005227 446 QMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLD-------HKFTAKVA 518 (707)
Q Consensus 446 ~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~-------~~~~~kl~ 518 (707)
.+||+||.+.|+|.+++. ....++|..++.++.|+++-++.||..+ |||+||||+|.||. +..-++|+
T Consensus 769 S~lv~ey~~~Gtlld~~N--~~~~m~e~lv~~~~~qml~ive~lH~~~---IIHgDiKPDNfll~~~~~~~~~~~~l~lI 843 (974)
T KOG1166|consen 769 SVLVSEYSPYGTLLDLIN--TNKVMDEYLVMFFSCQMLRIVEHLHAMG---IIHGDIKPDNFLLRREICADSDSKGLYLI 843 (974)
T ss_pred ceeeeeccccccHHHhhc--cCCCCCchhhhHHHHHHHHHHHHHHhcc---eecccCCcceeEeecccCCCCcccceEEE
Confidence 899999999999999996 5567999999999999999999999999 99999999999993 34569999
Q ss_pred eecccccCCCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhh
Q 005227 519 DFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQ 598 (707)
Q Consensus 519 DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~ 598 (707)
|||.+-.+..-. ........++|-.+-.+|...|.+|++.+|-|.++.+++-|+.|+..= ..
T Consensus 844 DfG~siDm~lfp-----~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y~q-------------~~ 905 (974)
T KOG1166|consen 844 DFGRSIDMKLFP-----DGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKYME-------------VK 905 (974)
T ss_pred ecccceeeeEcC-----CCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHHHH-------------hc
Confidence 999986543211 123456677899999999999999999999999999999999995421 01
Q ss_pred cccchhhccCCCCC-CChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 005227 599 SSMMFSVIDGNMGS-YPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 651 (707)
Q Consensus 599 ~~~~~~~~~~~~~~-~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~ 651 (707)
.+..+.+-.+ +.. ...+.+..++.++ ++.+-..-|...++...++..+.
T Consensus 906 ~g~~~~~~~~-~~Ry~~~~~W~~~F~~l---LN~~~~~~p~l~~lr~~~~~~~~ 955 (974)
T KOG1166|consen 906 NGSSWMVKTN-FPRYWKRDMWNKFFDLL---LNPDCDTLPNLQELRTELEEVLA 955 (974)
T ss_pred CCcceecccc-chhhhhHHHHHHHHHHH---hCcCcccchhHHHHHHHHHHHHH
Confidence 1111111111 111 2234444444444 44555555777777777776654
No 422
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.78 E-value=2.1e-18 Score=174.89 Aligned_cols=230 Identities=21% Similarity=0.243 Sum_probs=148.0
Q ss_pred CccceEeeeCceEEEEEEeC-CCcEEEEEEeccCCh---hhHHHHHHHHHHHHccCC----------CcceeEEEEEE--
Q 005227 378 NSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHH----------RNLVSLVGYCD-- 441 (707)
Q Consensus 378 ~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~h----------~nIv~l~~~~~-- 441 (707)
...+.||.|+++.||.+++. +++.+|||+...... ...+++.+|.-....+.+ -.++-.++...
T Consensus 15 ~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i~ 94 (288)
T PF14531_consen 15 VRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRIP 94 (288)
T ss_dssp EEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEET
T ss_pred EEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEEc
Confidence 34688999999999999976 689999998754332 223566666655555322 12222222221
Q ss_pred -------eC---C-----eEEEEEecCCCCCHHHHHhh---cCC--CCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecC
Q 005227 442 -------EE---G-----EQMLVYEFMSNGTLRDQLSA---KSK--EPLGFAMRLSIALGSSRGILYLHTEADPPVFHRD 501 (707)
Q Consensus 442 -------~~---~-----~~~lV~E~~~~gsL~~~l~~---~~~--~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~D 501 (707)
.. . ..+++|+-+ -++|.+++.. ... ..+....+..+..|+.+.+++||+.+ +||+|
T Consensus 95 ~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~G---lVHgd 170 (288)
T PF14531_consen 95 GKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYG---LVHGD 170 (288)
T ss_dssp TS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTT---EEEST
T ss_pred CCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcc---eEecc
Confidence 11 1 236788888 5699888643 221 23555667788899999999999999 99999
Q ss_pred CCCCCEEEcCCCcEEEeeecccccCCCCCCCCccccceecccccCCCccchhhhccC--------CCCCchhhHHHHHHH
Q 005227 502 IKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTH--------KLTDKSDVYSLGVVF 573 (707)
Q Consensus 502 lkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--------~~s~~sDVwSlGvll 573 (707)
|+|+|++++.+|.++|+||+....... .......+..|.+||..... .++.+.|.|++|+++
T Consensus 171 i~~~nfll~~~G~v~Lg~F~~~~r~g~----------~~~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~l 240 (288)
T PF14531_consen 171 IKPENFLLDQDGGVFLGDFSSLVRAGT----------RYRCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITL 240 (288)
T ss_dssp -SGGGEEE-TTS-EEE--GGGEEETTE----------EEEGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHH
T ss_pred cceeeEEEcCCCCEEEcChHHHeecCc----------eeeccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHH
Confidence 999999999999999999987765421 11113456789999987542 478899999999999
Q ss_pred HHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCC
Q 005227 574 LELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDAR 636 (707)
Q Consensus 574 ~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~R 636 (707)
|.|.+|..||........ .+..+..+. +.++.+..++...++.+|.+|
T Consensus 241 y~lWC~~lPf~~~~~~~~--------------~~~~f~~C~-~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 241 YSLWCGRLPFGLSSPEAD--------------PEWDFSRCR-DMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp HHHHHSS-STCCCGGGST--------------SGGGGTTSS----HHHHHHHHHHT-SSGGGS
T ss_pred HHHHHccCCCCCCCcccc--------------ccccchhcC-CcCHHHHHHHHHHccCCcccC
Confidence 999999999975433100 000233445 777888888888888888776
No 423
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.75 E-value=5.6e-19 Score=198.29 Aligned_cols=172 Identities=28% Similarity=0.432 Sum_probs=124.1
Q ss_pred hcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEec
Q 005227 374 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 452 (707)
Q Consensus 374 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~ 452 (707)
..+|+.++.|-.|+||.||..+++ ..+.+|.|+-+. ... .+- ++.....|.+|
T Consensus 82 e~df~~IklisngAygavylvrh~~trqrfa~kiNkq-~li-----lRn--ilt~a~npfvv------------------ 135 (1205)
T KOG0606|consen 82 ESDFNTIKLISNGAYGAVYLVRHKETRQRFAMKINKQ-NLI-----LRN--ILTFAGNPFVV------------------ 135 (1205)
T ss_pred ccccceeEeeccCCCCceeeeeccccccchhhccccc-chh-----hhc--cccccCCccee------------------
Confidence 457888999999999999999976 466788854322 211 110 22222333333
Q ss_pred CCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCC----
Q 005227 453 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV---- 528 (707)
Q Consensus 453 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~---- 528 (707)
|+-...++..+. ++... +.+++|||+.+ |+|||+||+|.+|+.-|++|++|||+++.-..
T Consensus 136 ---gDc~tllk~~g~--lPvdm--------vla~Eylh~yg---ivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~at 199 (1205)
T KOG0606|consen 136 ---GDCATLLKNIGP--LPVDM--------VLAVEYLHSYG---IVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLAT 199 (1205)
T ss_pred ---chhhhhcccCCC--Ccchh--------hHHhHhhccCC---eecCCCCCCcceeeecccccccchhhhhhhhhhccc
Confidence 555666644333 33332 67899999999 99999999999999999999999999864211
Q ss_pred ----CCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCc
Q 005227 529 ----PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 587 (707)
Q Consensus 529 ----~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~~ 587 (707)
..++.....-....++||+.|+|||++..+.|...+|+|++|+++||.+-|+.||+.+.
T Consensus 200 nl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdt 262 (1205)
T KOG0606|consen 200 NLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDT 262 (1205)
T ss_pred hhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCC
Confidence 11111111112234589999999999999999999999999999999999999998653
No 424
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.73 E-value=3.2e-17 Score=163.09 Aligned_cols=134 Identities=20% Similarity=0.330 Sum_probs=114.0
Q ss_pred ceEeeeCceEEEEEEeCCCcEEEEEEeccCChh--------hHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEec
Q 005227 381 TQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQ--------GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 452 (707)
Q Consensus 381 ~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~--------~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~ 452 (707)
+.||+|++|.||+|.. +|..|++|+....... ....+.+|++++..++|+++.....++...+..++||||
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~ 80 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEY 80 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEE
Confidence 5799999999999998 6778999976543211 124578899999999999998888887777888999999
Q ss_pred CCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeeccccc
Q 005227 453 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRL 525 (707)
Q Consensus 453 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~ 525 (707)
++|++|.+++.... . .+..++.+++.+|.++|+.+ ++|+|++|+|||++ ++.++|+|||.+..
T Consensus 81 ~~G~~L~~~~~~~~-----~-~~~~i~~~i~~~l~~lH~~~---i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 81 IEGEPLKDLINSNG-----M-EELELSREIGRLVGKLHSAG---IIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred eCCcCHHHHHHhcc-----H-HHHHHHHHHHHHHHHHHhCC---cccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 99999999985432 1 78899999999999999998 99999999999999 78999999998864
No 425
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.72 E-value=3.8e-17 Score=165.39 Aligned_cols=202 Identities=20% Similarity=0.246 Sum_probs=144.6
Q ss_pred CCCcceeEEEEEEe---------------------------CCeEEEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHH
Q 005227 429 HHRNLVSLVGYCDE---------------------------EGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALG 481 (707)
Q Consensus 429 ~h~nIv~l~~~~~~---------------------------~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ 481 (707)
+|||||++.++|.+ ....|+||... ..+|..++-.+. .+.....-|+.|
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY-~~tLr~yl~~~~---~s~r~~~~~laQ 349 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRY-RQTLREYLWTRH---RSYRTGRVILAQ 349 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcc-hhhHHHHHhcCC---CchHHHHHHHHH
Confidence 59999999887633 23578999887 459999995543 555667778999
Q ss_pred HHHHHHHHHhCCCCCeEecCCCCCCEEE--cCCC--cEEEeeecccccCCCCCCCCccccceecccccCCCccchhhhcc
Q 005227 482 SSRGILYLHTEADPPVFHRDIKASNILL--DHKF--TAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT 557 (707)
Q Consensus 482 ia~gL~yLH~~~~~~ivH~Dlkp~NILl--~~~~--~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 557 (707)
+++|+.|||.++ |.|||+|++|||+ |+|+ ...|+|||.+--....... ...........|.-.-||||+...
T Consensus 350 lLEav~hL~~hg---vAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlq-lpy~S~~Vd~GGNa~lmAPEi~ta 425 (598)
T KOG4158|consen 350 LLEAVTHLHKHG---VAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQ-LPYESDEVDLGGNAKLMAPEIATA 425 (598)
T ss_pred HHHHHHHHHHcc---chhhcccccceEEEecCCCCcEEEEcccceeeeccccccc-cccccccccCCCcceecchhhhhc
Confidence 999999999999 9999999999999 3444 5788999987432221100 000111223446778999999875
Q ss_pred CC------CCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhccc
Q 005227 558 HK------LTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQD 631 (707)
Q Consensus 558 ~~------~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~ 631 (707)
.+ --.|+|.|+.|.+.||++....||....+..-.. ...-...++..|+.++..+.+++...++.
T Consensus 426 ~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~---------r~Yqe~qLPalp~~vpp~~rqlV~~lL~r 496 (598)
T KOG4158|consen 426 VPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDT---------RTYQESQLPALPSRVPPVARQLVFDLLKR 496 (598)
T ss_pred CCCCceeeccchhhhhhhhhhHHHHhccCCcccccchheech---------hhhhhhhCCCCcccCChHHHHHHHHHhcC
Confidence 32 1248999999999999999999997533211000 11112345667888999999999999999
Q ss_pred CCCCCCCHHHHHHHHH
Q 005227 632 ETDARPSMSEVMRELE 647 (707)
Q Consensus 632 ~p~~RPt~~~v~~~L~ 647 (707)
+|.+|++..-....++
T Consensus 497 ~pskRvsp~iAANvl~ 512 (598)
T KOG4158|consen 497 DPSKRVSPNIAANVLN 512 (598)
T ss_pred CccccCCccHHHhHHH
Confidence 9999998765554443
No 426
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.72 E-value=5.6e-17 Score=159.74 Aligned_cols=131 Identities=22% Similarity=0.337 Sum_probs=107.7
Q ss_pred eEeeeCceEEEEEEeCCCcEEEEEEeccCChh--------hHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEecC
Q 005227 382 QIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQ--------GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 453 (707)
Q Consensus 382 ~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~--------~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~ 453 (707)
.||+|+||.||+|.+ ++..|++|........ ...++.+|+++++.++|+++.....++......++||||+
T Consensus 1 ~ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~ 79 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYI 79 (199)
T ss_pred CCCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEE
Confidence 379999999999996 5788999986542211 1256788999999999887766666666677789999999
Q ss_pred CCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccC
Q 005227 454 SNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 526 (707)
Q Consensus 454 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~ 526 (707)
+|++|.+++..... .++.+++++|.+||+.+ ++|+|++|+||+++ ++.++++|||++...
T Consensus 80 ~g~~l~~~~~~~~~---------~~~~~i~~~l~~lH~~g---i~H~Dl~~~Nil~~-~~~~~liDfg~a~~~ 139 (199)
T TIGR03724 80 EGKPLKDVIEEGND---------ELLREIGRLVGKLHKAG---IVHGDLTTSNIIVR-DDKLYLIDFGLGKYS 139 (199)
T ss_pred CCccHHHHHhhcHH---------HHHHHHHHHHHHHHHCC---eecCCCCcceEEEE-CCcEEEEECCCCcCC
Confidence 99999998754211 78999999999999998 99999999999999 889999999998753
No 427
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.72 E-value=5.6e-17 Score=159.61 Aligned_cols=144 Identities=19% Similarity=0.180 Sum_probs=112.3
Q ss_pred HHHHHhcCCCccceEeeeCceEEEEEEeCCCcEEEEEEeccCChh----------------------hHHHHHHHHHHHH
Q 005227 369 EMALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQ----------------------GEKEFLTEIQFLS 426 (707)
Q Consensus 369 ~l~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~----------------------~~~~~~~E~~~l~ 426 (707)
++......|...+.||+|+||.||+|..++|+.||||++...... ....+..|+.++.
T Consensus 9 ~~~~~~~~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 88 (198)
T cd05144 9 TLVKRGVVESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALK 88 (198)
T ss_pred HHHHcCchhhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHH
Confidence 333333447788999999999999999888999999986542210 1123677899999
Q ss_pred ccCCC--cceeEEEEEEeCCeEEEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCC
Q 005227 427 RLHHR--NLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKA 504 (707)
Q Consensus 427 ~l~h~--nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp 504 (707)
.+.|+ .+...++. ...++||||+++++|.+.... .....++.+++.++.++|+.+ |+||||||
T Consensus 89 ~l~~~~i~v~~~~~~----~~~~lv~e~~~g~~L~~~~~~--------~~~~~~~~~i~~~l~~lh~~g---i~H~Dl~p 153 (198)
T cd05144 89 ALYEEGFPVPKPIDW----NRHAVVMEYIDGVELYRVRVL--------EDPEEVLDEILEEIVKAYKHG---IIHGDLSE 153 (198)
T ss_pred HHHHcCCCCCceeec----CCceEEEEEeCCcchhhcccc--------ccHHHHHHHHHHHHHHHHHCC---CCcCCCCc
Confidence 99877 44444442 345899999999998765421 234678899999999999988 99999999
Q ss_pred CCEEEcCCCcEEEeeecccccCC
Q 005227 505 SNILLDHKFTAKVADFGLSRLAP 527 (707)
Q Consensus 505 ~NILl~~~~~~kl~DFGla~~~~ 527 (707)
+||++++++.++|+|||++....
T Consensus 154 ~Nill~~~~~~~liDfg~~~~~~ 176 (198)
T cd05144 154 FNILVDDDEKIYIIDWPQMVSTD 176 (198)
T ss_pred ccEEEcCCCcEEEEECCccccCC
Confidence 99999999999999999996543
No 428
>smart00090 RIO RIO-like kinase.
Probab=99.71 E-value=5.2e-17 Score=163.55 Aligned_cols=142 Identities=20% Similarity=0.155 Sum_probs=110.1
Q ss_pred CCCccceEeeeCceEEEEEE--eCCCcEEEEEEeccCChh------------------------hHHHHHHHHHHHHccC
Q 005227 376 NFNSSTQIGQGGYGKVYKGI--LPDGTVVAVKRAQEGSLQ------------------------GEKEFLTEIQFLSRLH 429 (707)
Q Consensus 376 ~~~~~~~lG~G~fg~Vy~~~--~~~~~~vavK~l~~~~~~------------------------~~~~~~~E~~~l~~l~ 429 (707)
-|++.+.||+|+||.||+|. ..+|+.||||++...... ....+..|++.++++.
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~ 108 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY 108 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 36778999999999999998 468999999988743210 0123568999999997
Q ss_pred CCc--ceeEEEEEEeCCeEEEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCE
Q 005227 430 HRN--LVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNI 507 (707)
Q Consensus 430 h~n--Iv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NI 507 (707)
+.. +.+++++ ...++||||+++.+|....... ..+.......++.|++.++++||+.+ .|+||||||+||
T Consensus 109 ~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~g--~iiH~Dikp~NI 180 (237)
T smart00090 109 EAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLKD--VEPEEEEEFELYDDILEEMRKLYKEG--ELVHGDLSEYNI 180 (237)
T ss_pred hcCCCCCeeeEe----cCceEEEEEecCCccccccccc--CCcchHHHHHHHHHHHHHHHHHHhcC--CEEeCCCChhhE
Confidence 533 3444443 2358999999998887654222 23556667899999999999999876 399999999999
Q ss_pred EEcCCCcEEEeeecccccC
Q 005227 508 LLDHKFTAKVADFGLSRLA 526 (707)
Q Consensus 508 Ll~~~~~~kl~DFGla~~~ 526 (707)
+++ ++.++|+|||.+...
T Consensus 181 li~-~~~i~LiDFg~a~~~ 198 (237)
T smart00090 181 LVH-DGKVVIIDVSQSVEL 198 (237)
T ss_pred EEE-CCCEEEEEChhhhcc
Confidence 999 889999999998754
No 429
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.70 E-value=8.3e-17 Score=182.30 Aligned_cols=140 Identities=20% Similarity=0.282 Sum_probs=113.5
Q ss_pred HHHhcCCCccceEeeeCceEEEEEEeCCCcEEEEEE-eccC-Ch------hhHHHHHHHHHHHHccCCCcceeEEEEEEe
Q 005227 371 ALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKR-AQEG-SL------QGEKEFLTEIQFLSRLHHRNLVSLVGYCDE 442 (707)
Q Consensus 371 ~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~-l~~~-~~------~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~ 442 (707)
......|...+.||+|+||+||+|.+.+.. +++|+ .... .. ...+++.+|+++++.++|++++..+.++..
T Consensus 329 ~~~~~~~~~~~~iG~G~~g~Vy~~~~~~~~-~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~ 407 (535)
T PRK09605 329 EEVKRRKIPDHLIGKGAEADIKKGEYLGRD-AVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVD 407 (535)
T ss_pred cccccccCccceeccCCcEEEEEEeecCcc-ceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEe
Confidence 333455667899999999999999975444 33333 2211 11 123568899999999999999988888877
Q ss_pred CCeEEEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecc
Q 005227 443 EGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGL 522 (707)
Q Consensus 443 ~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGl 522 (707)
....++||||+++++|.+++. ....++.+++++|.|||+.+ ++||||||+|||+ +++.++|+|||+
T Consensus 408 ~~~~~lv~E~~~g~~L~~~l~----------~~~~~~~~i~~~L~~lH~~g---iiHrDlkp~NILl-~~~~~~liDFGl 473 (535)
T PRK09605 408 PEEKTIVMEYIGGKDLKDVLE----------GNPELVRKVGEIVAKLHKAG---IVHGDLTTSNFIV-RDDRLYLIDFGL 473 (535)
T ss_pred CCCCEEEEEecCCCcHHHHHH----------HHHHHHHHHHHHHHHHHhCC---CccCCCChHHEEE-ECCcEEEEeCcc
Confidence 778899999999999999884 35678999999999999998 9999999999999 578999999999
Q ss_pred ccc
Q 005227 523 SRL 525 (707)
Q Consensus 523 a~~ 525 (707)
++.
T Consensus 474 a~~ 476 (535)
T PRK09605 474 GKY 476 (535)
T ss_pred ccc
Confidence 975
No 430
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.66 E-value=3.4e-17 Score=172.91 Aligned_cols=127 Identities=28% Similarity=0.413 Sum_probs=108.4
Q ss_pred eEEEEEecCCCCCHHHHHhh-cCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeeccc
Q 005227 445 EQMLVYEFMSNGTLRDQLSA-KSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLS 523 (707)
Q Consensus 445 ~~~lV~E~~~~gsL~~~l~~-~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla 523 (707)
..++.|++|.-.+|.+||.+ ......++.....++.|++.|++| ++ .+|+|+||.||+...+..+||+|||+.
T Consensus 330 ~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~---~ihrdlkp~nif~~~d~q~kIgDFgl~ 403 (516)
T KOG1033|consen 330 YLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KG---LIHRDLKPSNIFFSDDDQLKIGDFGLV 403 (516)
T ss_pred chhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---cc---chhhhccccccccccchhhhhhhhhhe
Confidence 57899999999999999974 445567889999999999999999 66 899999999999999999999999998
Q ss_pred ccCCCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHc
Q 005227 524 RLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT 578 (707)
Q Consensus 524 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~ellt 578 (707)
....... .........+...||..||+||.+.+..|+.++||||||++++|+++
T Consensus 404 ts~~~~~-~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~ 457 (516)
T KOG1033|consen 404 TSQDKDE-TVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLI 457 (516)
T ss_pred eecccCC-cccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHH
Confidence 7665432 11112234456779999999999999999999999999999999997
No 431
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.61 E-value=5e-15 Score=138.17 Aligned_cols=135 Identities=19% Similarity=0.163 Sum_probs=114.6
Q ss_pred ccceEeeeCceEEEEEEeCCCcEEEEEEeccCChhhHHHHHHHHHHHHccCC--CcceeEEEEEEeCCeEEEEEecCCCC
Q 005227 379 SSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHH--RNLVSLVGYCDEEGEQMLVYEFMSNG 456 (707)
Q Consensus 379 ~~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h--~nIv~l~~~~~~~~~~~lV~E~~~~g 456 (707)
+.+.||+|.++.||++...+ ..+++|....... ...+.+|+.+++.++| .++.++++++...+..+++|||++++
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~ 78 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKD-EDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGE 78 (155)
T ss_pred cceecccccccceEEEEecC-CeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCe
Confidence 35789999999999999854 7899999866433 4678899999999976 58999999888888899999999887
Q ss_pred CHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeeccccc
Q 005227 457 TLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRL 525 (707)
Q Consensus 457 sL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~ 525 (707)
.+..+ +......++.+++++++++|......++|+|++|+||++++.+.+++.|||.++.
T Consensus 79 ~~~~~---------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~ 138 (155)
T cd05120 79 TLDEV---------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY 138 (155)
T ss_pred ecccC---------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence 76543 5566778899999999999986545599999999999999999999999998864
No 432
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.61 E-value=3.3e-15 Score=145.53 Aligned_cols=136 Identities=23% Similarity=0.212 Sum_probs=98.4
Q ss_pred cceEeeeCceEEEEEEeCCCcEEEEEEeccCChhh--HHH----------------------HHHHHHHHHccCCCc--c
Q 005227 380 STQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQG--EKE----------------------FLTEIQFLSRLHHRN--L 433 (707)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~--~~~----------------------~~~E~~~l~~l~h~n--I 433 (707)
.+.||+|+||+||+|...+++.||||++....... ... ...|.+.+..+.+.. +
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~ 81 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV 81 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 46799999999999998889999999876532211 111 135666666664432 4
Q ss_pred eeEEEEEEeCCeEEEEEecCCCCCHHH-HHhhcCCCCcCHHHHHHHHHHHHHHHHHHHh-CCCCCeEecCCCCCCEEEcC
Q 005227 434 VSLVGYCDEEGEQMLVYEFMSNGTLRD-QLSAKSKEPLGFAMRLSIALGSSRGILYLHT-EADPPVFHRDIKASNILLDH 511 (707)
Q Consensus 434 v~l~~~~~~~~~~~lV~E~~~~gsL~~-~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~ivH~Dlkp~NILl~~ 511 (707)
.+.+++ ...++||||++++++.. .+.... .. .....++.+++.++.++|. .+ |+|+||||+||+++
T Consensus 82 ~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~---~~-~~~~~~~~~~~~~l~~lh~~~~---ivH~Dl~p~Nili~- 149 (187)
T cd05119 82 PKPIDL----NRHVLVMEFIGGDGIPAPRLKDVR---LL-EDPEELYDQILELMRKLYREAG---LVHGDLSEYNILVD- 149 (187)
T ss_pred CceEec----CCCEEEEEEeCCCCccChhhhhhh---hc-ccHHHHHHHHHHHHHHHhhccC---cCcCCCChhhEEEE-
Confidence 444443 24689999999854321 111111 11 5678899999999999999 77 99999999999999
Q ss_pred CCcEEEeeecccccCC
Q 005227 512 KFTAKVADFGLSRLAP 527 (707)
Q Consensus 512 ~~~~kl~DFGla~~~~ 527 (707)
++.++++|||.+....
T Consensus 150 ~~~~~liDfg~a~~~~ 165 (187)
T cd05119 150 DGKVYIIDVPQAVEID 165 (187)
T ss_pred CCcEEEEECccccccc
Confidence 8999999999997543
No 433
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.58 E-value=1.9e-14 Score=145.33 Aligned_cols=135 Identities=21% Similarity=0.254 Sum_probs=105.8
Q ss_pred cceEe-eeCceEEEEEEeCCCcEEEEEEeccCC-------------hhhHHHHHHHHHHHHccCCCcc--eeEEEEEEeC
Q 005227 380 STQIG-QGGYGKVYKGILPDGTVVAVKRAQEGS-------------LQGEKEFLTEIQFLSRLHHRNL--VSLVGYCDEE 443 (707)
Q Consensus 380 ~~~lG-~G~fg~Vy~~~~~~~~~vavK~l~~~~-------------~~~~~~~~~E~~~l~~l~h~nI--v~l~~~~~~~ 443 (707)
...|| .|+.|+||.+... +..++||++.... ......+.+|++++..++|+++ ++.+++....
T Consensus 36 ~~~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~ 114 (239)
T PRK01723 36 ARVVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR 114 (239)
T ss_pred CceeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence 46788 8999999999884 6778898875321 1223567889999999998875 6777765433
Q ss_pred C----eEEEEEecCCC-CCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEe
Q 005227 444 G----EQMLVYEFMSN-GTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVA 518 (707)
Q Consensus 444 ~----~~~lV~E~~~~-gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~ 518 (707)
. ..++||||+++ .+|.+++... .++.. .+.+++.+|.+||+.+ |+||||||.|||++.++.++|+
T Consensus 115 ~~~~~~~~lV~e~l~G~~~L~~~l~~~---~l~~~----~~~~i~~~l~~lH~~G---I~HrDlkp~NILv~~~~~v~LI 184 (239)
T PRK01723 115 HGLFYRADILIERIEGARDLVALLQEA---PLSEE----QWQAIGQLIARFHDAG---VYHADLNAHNILLDPDGKFWLI 184 (239)
T ss_pred cCcceeeeEEEEecCCCCCHHHHHhcC---CCCHH----HHHHHHHHHHHHHHCC---CCCCCCCchhEEEcCCCCEEEE
Confidence 2 23599999997 6999988542 34443 3568899999999999 9999999999999999999999
Q ss_pred eeccccc
Q 005227 519 DFGLSRL 525 (707)
Q Consensus 519 DFGla~~ 525 (707)
|||.++.
T Consensus 185 Dfg~~~~ 191 (239)
T PRK01723 185 DFDRGEL 191 (239)
T ss_pred ECCCccc
Confidence 9998864
No 434
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.57 E-value=2.5e-16 Score=177.82 Aligned_cols=262 Identities=21% Similarity=0.250 Sum_probs=194.4
Q ss_pred cCCCccceEeeeCceEEEEEEeC--CCcEEEEEEeccCC--hhhHHHHHHHHHHHHccC-CCcceeEEEEEEeCCeEEEE
Q 005227 375 NNFNSSTQIGQGGYGKVYKGILP--DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLH-HRNLVSLVGYCDEEGEQMLV 449 (707)
Q Consensus 375 ~~~~~~~~lG~G~fg~Vy~~~~~--~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~~lV 449 (707)
..|...+.||+|+|+.|-..... ....+|+|.+.... ....+....|..+=+.+. |+|++.+++.....+..+++
T Consensus 20 ~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~ 99 (601)
T KOG0590|consen 20 SQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLLS 99 (601)
T ss_pred ccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCcccccc
Confidence 45667778999999999888753 34567777665432 222344555777777775 99999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHH-hCCCCCeEecCCCCCCEEEcCCC-cEEEeeecccccCC
Q 005227 450 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLH-TEADPPVFHRDIKASNILLDHKF-TAKVADFGLSRLAP 527 (707)
Q Consensus 450 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH-~~~~~~ivH~Dlkp~NILl~~~~-~~kl~DFGla~~~~ 527 (707)
++|..++++.+.+........+....-.+..|+..++.|+| ..+ +.|+|+||+|.+++..+ ..+++|||+|..+.
T Consensus 100 ~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~---~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~ 176 (601)
T KOG0590|consen 100 LSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENG---VTHRDIKPSNSLLDESGSALKIADFGLATAYR 176 (601)
T ss_pred cCcccccccccccccCCccCCCCcchhhhhhhhccCccccCcccc---cccCCCCCccchhccCCCcccCCCchhhcccc
Confidence 99999999988883222223555666778999999999999 887 99999999999999999 99999999998776
Q ss_pred C-CCCCCccccceeccccc-CCCccchhhhccC-CCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccchh
Q 005227 528 V-PDIEGIVPAHVSTVVKG-TPGYLDPEYFLTH-KLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFS 604 (707)
Q Consensus 528 ~-~~~~~~~~~~~~~~~~g-t~~y~aPE~~~~~-~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~~~ 604 (707)
. .+. .......+| ++.|+|||...+. -.....|+||.|+++.-+++|..|+........
T Consensus 177 ~~~g~-----~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~------------- 238 (601)
T KOG0590|consen 177 NKNGA-----ERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDG------------- 238 (601)
T ss_pred ccCCc-----ceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccc-------------
Confidence 5 221 233445667 9999999999884 445679999999999999999999864322100
Q ss_pred hccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCCCCcCCCC
Q 005227 605 VIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKH 684 (707)
Q Consensus 605 ~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~H 684 (707)
.....+..| .|.+ ...+........+++.+++..+|+.|.+.+++-.+
T Consensus 239 ---------------~~~~~~~~~------~~~~-----------~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~d 286 (601)
T KOG0590|consen 239 ---------------RYSSWKSNK------GRFT-----------QLPWNSISDQAHDLLHKILKENPSNRLSIEELKLD 286 (601)
T ss_pred ---------------cceeecccc------cccc-----------cCccccCChhhhhcccccccCCchhcccccccccc
Confidence 000000011 0000 01122334456688999999999999999999999
Q ss_pred CCCCC
Q 005227 685 PYVSS 689 (707)
Q Consensus 685 p~f~~ 689 (707)
||+..
T Consensus 287 ~~~~~ 291 (601)
T KOG0590|consen 287 NWLSS 291 (601)
T ss_pred ccccc
Confidence 99988
No 435
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.53 E-value=6.1e-16 Score=139.73 Aligned_cols=127 Identities=26% Similarity=0.461 Sum_probs=116.8
Q ss_pred CCceEEEeeCCcCCCCCCCcCCCCcccEEeccCCcCcccCCCccccc-CccEEEccCccCCCCCCcccCCCcccceEecc
Q 005227 2 SKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSL-NITTIKLSNNKLTGTIPSNFSGLPRLQRLFIA 80 (707)
Q Consensus 2 ~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~g~ip~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls 80 (707)
++++.|.||+|+|+-.+|.+..|.+|+.|++++|+|+ .+|..+.++ +|+.|+++-|++. .+|..|+.++.|+.|||+
T Consensus 33 s~ITrLtLSHNKl~~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~levldlt 110 (264)
T KOG0617|consen 33 SNITRLTLSHNKLTVVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALEVLDLT 110 (264)
T ss_pred hhhhhhhcccCceeecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhhhhhcc
Confidence 4678899999999999999999999999999999999 999999887 8999999999999 999999999999999999
Q ss_pred Cccccc-CCCCcccccccCCCCccceEEccCccCCCCCCCC-CCCCCceeeccCCCc
Q 005227 81 NNSLSG-SIPSSIWQSRTLNATETFILDFQNNNLTNISGSF-NIPPNVTVRLRGNPF 135 (707)
Q Consensus 81 ~N~l~g-~~p~~~~~l~~L~~~~l~~L~l~~N~l~~~~~~~-~~~~l~~l~l~~N~~ 135 (707)
+|+++. .+|..|+.++.|+ -|+|++|.++-+|+.+ .+.+|+.|.++.|.+
T Consensus 111 ynnl~e~~lpgnff~m~tlr-----alyl~dndfe~lp~dvg~lt~lqil~lrdndl 162 (264)
T KOG0617|consen 111 YNNLNENSLPGNFFYMTTLR-----ALYLGDNDFEILPPDVGKLTNLQILSLRDNDL 162 (264)
T ss_pred ccccccccCCcchhHHHHHH-----HHHhcCCCcccCChhhhhhcceeEEeeccCch
Confidence 999873 6899998887776 7999999999999888 899999999999886
No 436
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.47 E-value=2.1e-15 Score=136.34 Aligned_cols=132 Identities=23% Similarity=0.460 Sum_probs=122.1
Q ss_pred CCCceEEEeeCCcCCCCCCCcCCCCcccEEeccCCcCcccCCCccccc-CccEEEccCccCCC-CCCcccCCCcccceEe
Q 005227 1 MSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSL-NITTIKLSNNKLTG-TIPSNFSGLPRLQRLF 78 (707)
Q Consensus 1 L~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~g~ip~~~~~~-~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~ 78 (707)
|.+|+.|++++|+|+.++++++.++.|+.|+++-|++. .+|.++++. .|++|||.+|+++. .+|..|..|+.|+.|+
T Consensus 55 l~nlevln~~nnqie~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~levldltynnl~e~~lpgnff~m~tlraly 133 (264)
T KOG0617|consen 55 LKNLEVLNLSNNQIEELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALEVLDLTYNNLNENSLPGNFFYMTTLRALY 133 (264)
T ss_pred hhhhhhhhcccchhhhcChhhhhchhhhheecchhhhh-cCccccCCCchhhhhhccccccccccCCcchhHHHHHHHHH
Confidence 46899999999999999999999999999999999999 999999987 89999999999974 6899999999999999
Q ss_pred ccCcccccCCCCcccccccCCCCccceEEccCccCCCCCCCC-CCCCCceeeccCCCccccC
Q 005227 79 IANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSF-NIPPNVTVRLRGNPFCLNT 139 (707)
Q Consensus 79 ls~N~l~g~~p~~~~~l~~L~~~~l~~L~l~~N~l~~~~~~~-~~~~l~~l~l~~N~~~~~~ 139 (707)
|++|.+. .+|..++++++|+ .|.+.+|.|-.+|..+ .+..|+.|.+.+|++..-+
T Consensus 134 l~dndfe-~lp~dvg~lt~lq-----il~lrdndll~lpkeig~lt~lrelhiqgnrl~vlp 189 (264)
T KOG0617|consen 134 LGDNDFE-ILPPDVGKLTNLQ-----ILSLRDNDLLSLPKEIGDLTRLRELHIQGNRLTVLP 189 (264)
T ss_pred hcCCCcc-cCChhhhhhccee-----EEeeccCchhhCcHHHHHHHHHHHHhcccceeeecC
Confidence 9999999 9999999988776 9999999999999888 7899999999999986544
No 437
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.46 E-value=3.4e-13 Score=147.92 Aligned_cols=141 Identities=23% Similarity=0.247 Sum_probs=101.4
Q ss_pred cceEeeeCceEEEEEEeCCCcEEEEEEeccCChhh----------------------------------------HHHHH
Q 005227 380 STQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQG----------------------------------------EKEFL 419 (707)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~----------------------------------------~~~~~ 419 (707)
.+.||.|++|.||+|++++|+.||||+........ +-+|.
T Consensus 122 ~~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~ 201 (437)
T TIGR01982 122 EKPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLR 201 (437)
T ss_pred CcceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHH
Confidence 46899999999999999999999999986532110 01245
Q ss_pred HHHHHHHccC----CCcceeEEEEE-EeCCeEEEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHH-HHHHHHhCC
Q 005227 420 TEIQFLSRLH----HRNLVSLVGYC-DEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSR-GILYLHTEA 493 (707)
Q Consensus 420 ~E~~~l~~l~----h~nIv~l~~~~-~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~-gL~yLH~~~ 493 (707)
+|++.+.+++ |.+-+.+-.++ ...+..+|||||++|++|.++...... .. .+..++..++. .+..+|..+
T Consensus 202 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~-~~---~~~~ia~~~~~~~l~ql~~~g 277 (437)
T TIGR01982 202 REAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEA-GL---DRKALAENLARSFLNQVLRDG 277 (437)
T ss_pred HHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhc-CC---CHHHHHHHHHHHHHHHHHhCC
Confidence 5666665552 33333333333 334567999999999999887653211 12 23456666665 478899888
Q ss_pred CCCeEecCCCCCCEEEcCCCcEEEeeecccccCC
Q 005227 494 DPPVFHRDIKASNILLDHKFTAKVADFGLSRLAP 527 (707)
Q Consensus 494 ~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~ 527 (707)
++|+|+||.||+++++++++++|||++..+.
T Consensus 278 ---~~H~D~hPgNilv~~~g~i~liDfG~~~~l~ 308 (437)
T TIGR01982 278 ---FFHADLHPGNIFVLKDGKIIALDFGIVGRLS 308 (437)
T ss_pred ---ceeCCCCcccEEECCCCcEEEEeCCCeeECC
Confidence 9999999999999999999999999997654
No 438
>PLN03150 hypothetical protein; Provisional
Probab=99.44 E-value=3.7e-13 Score=154.34 Aligned_cols=105 Identities=29% Similarity=0.456 Sum_probs=74.0
Q ss_pred cccEEeccCCcCcccCCCccccc-CccEEEccCccCCCCCCcccCCCcccceEeccCcccccCCCCcccccccCCCCccc
Q 005227 26 NLGYLDLSSNQLNGSIPPGRLSL-NITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETF 104 (707)
Q Consensus 26 ~L~~L~L~~N~l~g~ip~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~~~l~ 104 (707)
.++.|+|++|.|+|.+|..+..+ +|+.|+|++|+|+|.+|..++.|++|+.|+|++|+|+|.+|..+.++++|+
T Consensus 419 ~v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~----- 493 (623)
T PLN03150 419 FIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLR----- 493 (623)
T ss_pred EEEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCC-----
Confidence 36777777777777777776665 777777777777777777777777777777777777777777777666555
Q ss_pred eEEccCccCCCC-CCCC-C-CCCCceeeccCCCc
Q 005227 105 ILDFQNNNLTNI-SGSF-N-IPPNVTVRLRGNPF 135 (707)
Q Consensus 105 ~L~l~~N~l~~~-~~~~-~-~~~l~~l~l~~N~~ 135 (707)
.|+|++|+|++. |..+ . ..++..+++.+|+.
T Consensus 494 ~L~Ls~N~l~g~iP~~l~~~~~~~~~l~~~~N~~ 527 (623)
T PLN03150 494 ILNLNGNSLSGRVPAALGGRLLHRASFNFTDNAG 527 (623)
T ss_pred EEECcCCcccccCChHHhhccccCceEEecCCcc
Confidence 777777777753 3333 1 23445667777764
No 439
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.42 E-value=1e-14 Score=154.96 Aligned_cols=129 Identities=27% Similarity=0.446 Sum_probs=114.9
Q ss_pred CCCceEEEeeCCcCCCCCCCcCCCCcccEEeccCCcCcc-cCCCccccc-CccEEEccCccCCCCCCcccCCCcccceEe
Q 005227 1 MSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNG-SIPPGRLSL-NITTIKLSNNKLTGTIPSNFSGLPRLQRLF 78 (707)
Q Consensus 1 L~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~g-~ip~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 78 (707)
|.+|++|.+++|+|..+..++..|+.|+.+++..|+|.. -||..++.+ .|+.||||+|+|+ ..|..+..-+++-+|+
T Consensus 54 lqkLEHLs~~HN~L~~vhGELs~Lp~LRsv~~R~N~LKnsGiP~diF~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLN 132 (1255)
T KOG0444|consen 54 LQKLEHLSMAHNQLISVHGELSDLPRLRSVIVRDNNLKNSGIPTDIFRLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLN 132 (1255)
T ss_pred HhhhhhhhhhhhhhHhhhhhhccchhhHHHhhhccccccCCCCchhcccccceeeecchhhhh-hcchhhhhhcCcEEEE
Confidence 457889999999999888899999999999999999873 389999988 8999999999999 8999999999999999
Q ss_pred ccCcccccCCCCccc-ccccCCCCccceEEccCccCCCCCCCC-CCCCCceeeccCCCcc
Q 005227 79 IANNSLSGSIPSSIW-QSRTLNATETFILDFQNNNLTNISGSF-NIPPNVTVRLRGNPFC 136 (707)
Q Consensus 79 ls~N~l~g~~p~~~~-~l~~L~~~~l~~L~l~~N~l~~~~~~~-~~~~l~~l~l~~N~~~ 136 (707)
||+|+|. +||.+++ +++ .|-+||||+|+|..+|+.+ .+..|++|.|++||+.
T Consensus 133 LS~N~Ie-tIPn~lfinLt-----DLLfLDLS~NrLe~LPPQ~RRL~~LqtL~Ls~NPL~ 186 (1255)
T KOG0444|consen 133 LSYNNIE-TIPNSLFINLT-----DLLFLDLSNNRLEMLPPQIRRLSMLQTLKLSNNPLN 186 (1255)
T ss_pred cccCccc-cCCchHHHhhH-----hHhhhccccchhhhcCHHHHHHhhhhhhhcCCChhh
Confidence 9999999 9998764 444 4459999999999999988 8899999999999974
No 440
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.41 E-value=4.4e-13 Score=133.30 Aligned_cols=155 Identities=24% Similarity=0.364 Sum_probs=115.6
Q ss_pred HHHHccCCCcceeEEEEEEeCC-----eEEEEEecCCCCCHHHHHhhc--CCCCcCHHHHHHHHHHHHHHHHHHHhCCCC
Q 005227 423 QFLSRLHHRNLVSLVGYCDEEG-----EQMLVYEFMSNGTLRDQLSAK--SKEPLGFAMRLSIALGSSRGILYLHTEADP 495 (707)
Q Consensus 423 ~~l~~l~h~nIv~l~~~~~~~~-----~~~lV~E~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ 495 (707)
.-+-++.|.|||++..|+.+.+ ...+++|||..|++..+|++. ....+....-.+++-||..||.|||+. .|
T Consensus 119 dnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~-~P 197 (458)
T KOG1266|consen 119 DNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSC-DP 197 (458)
T ss_pred HHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhcc-CC
Confidence 3445567999999999986543 478999999999999999863 334567777788999999999999996 68
Q ss_pred CeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHH
Q 005227 496 PVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLE 575 (707)
Q Consensus 496 ~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~e 575 (707)
+|+|+++.-+-|++..++-+||+----. .... ... ...........+-++|.|||+-.....+.++|||+||....|
T Consensus 198 piihgnlTc~tifiq~ngLIkig~~ap~-s~h~-s~~-~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAle 274 (458)
T KOG1266|consen 198 PIIHGNLTCDTIFIQHNGLIKIGSVAPD-STHP-SVN-STREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALE 274 (458)
T ss_pred ccccCCcchhheeecCCceEEecccCcc-ccch-hhh-hhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHH
Confidence 9999999999999999998887521111 0000 000 000111122346789999998888788889999999999999
Q ss_pred HHcCCC
Q 005227 576 LLTGMQ 581 (707)
Q Consensus 576 lltG~~ 581 (707)
|.-+..
T Consensus 275 mailEi 280 (458)
T KOG1266|consen 275 MAILEI 280 (458)
T ss_pred HHHhee
Confidence 987754
No 441
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.41 E-value=4e-13 Score=164.02 Aligned_cols=133 Identities=26% Similarity=0.494 Sum_probs=117.9
Q ss_pred CCCceEEEeeCCcCCCCCC-CcCCCCcccEEeccCCcCcccCCCccccc-CccEEEccCccCCCCCCcccCCCcccceEe
Q 005227 1 MSKLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQLNGSIPPGRLSL-NITTIKLSNNKLTGTIPSNFSGLPRLQRLF 78 (707)
Q Consensus 1 L~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~L~~N~l~g~ip~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 78 (707)
+++|+.|+|++|++++..| .|..+++|+.|+|++|+++|.+|.....+ +|+.|+|++|++.+.+|..+ .+++|+.|+
T Consensus 403 ~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~-~~~~L~~L~ 481 (968)
T PLN00113 403 CRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSF-GSKRLENLD 481 (968)
T ss_pred CCCCCEEECcCCEeeeECChhHhcCCCCCEEECcCCcccCccChhhccCCCCcEEECcCceeeeecCccc-ccccceEEE
Confidence 4689999999999999887 69999999999999999998888766655 89999999999999999876 468999999
Q ss_pred ccCcccccCCCCcccccccCCCCccceEEccCccCCCC-CCCC-CCCCCceeeccCCCccccC
Q 005227 79 IANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNI-SGSF-NIPPNVTVRLRGNPFCLNT 139 (707)
Q Consensus 79 ls~N~l~g~~p~~~~~l~~L~~~~l~~L~l~~N~l~~~-~~~~-~~~~l~~l~l~~N~~~~~~ 139 (707)
|++|+++|.+|..+.+++.|+ .|+|++|++++. |..+ .+++|+.|+|++|.+....
T Consensus 482 ls~n~l~~~~~~~~~~l~~L~-----~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 539 (968)
T PLN00113 482 LSRNQFSGAVPRKLGSLSELM-----QLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQI 539 (968)
T ss_pred CcCCccCCccChhhhhhhccC-----EEECcCCcceeeCChHHcCccCCCEEECCCCcccccC
Confidence 999999999999998877665 999999999975 4455 8899999999999987543
No 442
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.38 E-value=1e-12 Score=142.92 Aligned_cols=166 Identities=19% Similarity=0.195 Sum_probs=128.5
Q ss_pred eCCCcEEEEEEeccCChhhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEecCCCCCHHHHHhhcCCCCcCHHHH
Q 005227 396 LPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMR 475 (707)
Q Consensus 396 ~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~ 475 (707)
..++.+|.|...+...........+-++.|+.+|||||+++++.+..++..|+|+|-+ ..|..++++.+ ....
T Consensus 34 k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV--~Pl~~~lk~l~-----~~~v 106 (690)
T KOG1243|consen 34 KADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERV--RPLETVLKELG-----KEEV 106 (690)
T ss_pred eccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeecc--ccHHHHHHHhH-----HHHH
Confidence 3478888888887655444456778899999999999999999999999999999998 46888886643 5667
Q ss_pred HHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCCCccccceecccccCCCccchhhh
Q 005227 476 LSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYF 555 (707)
Q Consensus 476 ~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 555 (707)
...+.||+.||.|||..+. ++|++|.-+-|+|+..|+.||++|-++........ ......--..|..|+.+
T Consensus 107 ~~Gl~qIl~AL~FL~~d~~--lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~-------~~~~~~~~~s~~~P~~~ 177 (690)
T KOG1243|consen 107 CLGLFQILAALSFLNDDCN--LVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNA-------PAKSLYLIESFDDPEEI 177 (690)
T ss_pred HHHHHHHHHHHHHHhccCC--eeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCc-------ccccchhhhcccChhhc
Confidence 7789999999999997663 99999999999999999999999998865432110 00111112346667655
Q ss_pred ccCCCCCchhhHHHHHHHHHHHcC
Q 005227 556 LTHKLTDKSDVYSLGVVFLELLTG 579 (707)
Q Consensus 556 ~~~~~s~~sDVwSlGvll~elltG 579 (707)
.... -..|.|.|||+++|++.|
T Consensus 178 ~~s~--~s~D~~~Lg~li~el~ng 199 (690)
T KOG1243|consen 178 DPSE--WSIDSWGLGCLIEELFNG 199 (690)
T ss_pred Cccc--cchhhhhHHHHHHHHhCc
Confidence 4322 357999999999999999
No 443
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=99.37 E-value=4.6e-14 Score=149.41 Aligned_cols=132 Identities=23% Similarity=0.285 Sum_probs=92.2
Q ss_pred CCCceEEEeeCCcCCCCCC-CcCCCCcccEEeccCCcCcccCCCccccc--CccEEEccCccCCCCCCcccCCCcccceE
Q 005227 1 MSKLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQLNGSIPPGRLSL--NITTIKLSNNKLTGTIPSNFSGLPRLQRL 77 (707)
Q Consensus 1 L~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~L~~N~l~g~ip~~~~~~--~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 77 (707)
|+.|+.|+||+|.|..+-+ .+...++|++|+|++|+|+ .++++-+.. .|++|+|++|+|+..-...|..+++|+.|
T Consensus 292 Lt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~-~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~lssL~~L 370 (873)
T KOG4194|consen 292 LTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRIT-RLDEGSFRVLSQLEELNLSHNSIDHLAEGAFVGLSSLHKL 370 (873)
T ss_pred cchhhhhccchhhhheeecchhhhcccceeEeccccccc-cCChhHHHHHHHhhhhcccccchHHHHhhHHHHhhhhhhh
Confidence 4667777888888877665 5677778888888888888 777765543 67777777777776556677777888888
Q ss_pred eccCcccccCCCCcccccccCCCCccceEEccCccCCCCCCCC--CCCCCceeeccCCCc
Q 005227 78 FIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSF--NIPPNVTVRLRGNPF 135 (707)
Q Consensus 78 ~ls~N~l~g~~p~~~~~l~~L~~~~l~~L~l~~N~l~~~~~~~--~~~~l~~l~l~~N~~ 135 (707)
||++|.|++.|-+.-..... +++|+.|+|.+|+|..++... +++.|+.|+|.+|++
T Consensus 371 dLr~N~ls~~IEDaa~~f~g--l~~LrkL~l~gNqlk~I~krAfsgl~~LE~LdL~~Nai 428 (873)
T KOG4194|consen 371 DLRSNELSWCIEDAAVAFNG--LPSLRKLRLTGNQLKSIPKRAFSGLEALEHLDLGDNAI 428 (873)
T ss_pred cCcCCeEEEEEecchhhhcc--chhhhheeecCceeeecchhhhccCcccceecCCCCcc
Confidence 88888887766654322222 234447777777777776543 677777777777765
No 444
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.35 E-value=1.2e-13 Score=147.07 Aligned_cols=127 Identities=28% Similarity=0.368 Sum_probs=69.5
Q ss_pred CceEEEeeCCcCCCCCCCcCCCCcccEEeccCCcCcccCCCccccc--CccEEEccCccCCCCCCcccCCCcccceEecc
Q 005227 3 KLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSL--NITTIKLSNNKLTGTIPSNFSGLPRLQRLFIA 80 (707)
Q Consensus 3 ~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~g~ip~~~~~~--~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls 80 (707)
.|+.||||+|+|+..|..+..-+++-.|+||+|+|. +||..++-. .|-.||||+|+|. .+|..+.+|..|+.|+|+
T Consensus 104 dLt~lDLShNqL~EvP~~LE~AKn~iVLNLS~N~Ie-tIPn~lfinLtDLLfLDLS~NrLe-~LPPQ~RRL~~LqtL~Ls 181 (1255)
T KOG0444|consen 104 DLTILDLSHNQLREVPTNLEYAKNSIVLNLSYNNIE-TIPNSLFINLTDLLFLDLSNNRLE-MLPPQIRRLSMLQTLKLS 181 (1255)
T ss_pred cceeeecchhhhhhcchhhhhhcCcEEEEcccCccc-cCCchHHHhhHhHhhhccccchhh-hcCHHHHHHhhhhhhhcC
Confidence 344455555555444444444444445555555555 555444332 3444555555555 444444555555555555
Q ss_pred Ccccc-------------------------cCCCCcccccccCCCCccceEEccCccCCCCCCCC-CCCCCceeeccCCC
Q 005227 81 NNSLS-------------------------GSIPSSIWQSRTLNATETFILDFQNNNLTNISGSF-NIPPNVTVRLRGNP 134 (707)
Q Consensus 81 ~N~l~-------------------------g~~p~~~~~l~~L~~~~l~~L~l~~N~l~~~~~~~-~~~~l~~l~l~~N~ 134 (707)
+|.|. ..+|.++..+. +|..+|||.|+|..+|..+ .+++|+.|+|++|.
T Consensus 182 ~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~-----NL~dvDlS~N~Lp~vPecly~l~~LrrLNLS~N~ 256 (1255)
T KOG0444|consen 182 NNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLH-----NLRDVDLSENNLPIVPECLYKLRNLRRLNLSGNK 256 (1255)
T ss_pred CChhhHHHHhcCccchhhhhhhcccccchhhcCCCchhhhh-----hhhhccccccCCCcchHHHhhhhhhheeccCcCc
Confidence 55331 11333333333 3347888888888888776 88888888888888
Q ss_pred cc
Q 005227 135 FC 136 (707)
Q Consensus 135 ~~ 136 (707)
+.
T Consensus 257 it 258 (1255)
T KOG0444|consen 257 IT 258 (1255)
T ss_pred ee
Confidence 74
No 445
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=99.32 E-value=8.8e-14 Score=141.40 Aligned_cols=125 Identities=25% Similarity=0.395 Sum_probs=111.4
Q ss_pred CCceEEEeeCCcCCCCCCCcCCCCcccEEeccCCcCcccCCCccccc-CccEEEccCccCCCCCCcccC-CCcccceEec
Q 005227 2 SKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSL-NITTIKLSNNKLTGTIPSNFS-GLPRLQRLFI 79 (707)
Q Consensus 2 ~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~g~ip~~~~~~-~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~l 79 (707)
+.|++||...|-|+.+||+++.+.+|.-|||..|+|. .+| ++... .|.+|+++.|+|. .+|.+.. +|.+|.+|||
T Consensus 183 ~~L~~ld~~~N~L~tlP~~lg~l~~L~~LyL~~Nki~-~lP-ef~gcs~L~Elh~g~N~i~-~lpae~~~~L~~l~vLDL 259 (565)
T KOG0472|consen 183 KRLKHLDCNSNLLETLPPELGGLESLELLYLRRNKIR-FLP-EFPGCSLLKELHVGENQIE-MLPAEHLKHLNSLLVLDL 259 (565)
T ss_pred HHHHhcccchhhhhcCChhhcchhhhHHHHhhhcccc-cCC-CCCccHHHHHHHhcccHHH-hhHHHHhcccccceeeec
Confidence 5688999999999988889999999999999999999 999 44444 7999999999999 8888776 8999999999
Q ss_pred cCcccccCCCCcccccccCCCCccceEEccCccCCCCCCCC-CCCCCceeeccCCCcc
Q 005227 80 ANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSF-NIPPNVTVRLRGNPFC 136 (707)
Q Consensus 80 s~N~l~g~~p~~~~~l~~L~~~~l~~L~l~~N~l~~~~~~~-~~~~l~~l~l~~N~~~ 136 (707)
.+|+++ ..|+.+.-+.+|+ +||||+|.|+++|..+ ++ .|+.|.+.|||+.
T Consensus 260 RdNklk-e~Pde~clLrsL~-----rLDlSNN~is~Lp~sLgnl-hL~~L~leGNPlr 310 (565)
T KOG0472|consen 260 RDNKLK-EVPDEICLLRSLE-----RLDLSNNDISSLPYSLGNL-HLKFLALEGNPLR 310 (565)
T ss_pred cccccc-cCchHHHHhhhhh-----hhcccCCccccCCcccccc-eeeehhhcCCchH
Confidence 999999 9999998877776 8999999999999988 56 8899999999984
No 446
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.29 E-value=2.8e-13 Score=137.72 Aligned_cols=85 Identities=21% Similarity=0.279 Sum_probs=68.8
Q ss_pred ccCCCcccceEeccCcccccCCCCcccccccC-------------------CCCccceEEccCccCCCCCCC-C-CCCCC
Q 005227 67 NFSGLPRLQRLFIANNSLSGSIPSSIWQSRTL-------------------NATETFILDFQNNNLTNISGS-F-NIPPN 125 (707)
Q Consensus 67 ~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L-------------------~~~~l~~L~l~~N~l~~~~~~-~-~~~~l 125 (707)
.|..|++|+.|+|++|+|++.-+.+|..+..+ .+.+|+.|+|.+|+|+.+.+. + .+..|
T Consensus 269 cf~~L~~L~~lnlsnN~i~~i~~~aFe~~a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l 348 (498)
T KOG4237|consen 269 CFKKLPNLRKLNLSNNKITRIEDGAFEGAAELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSL 348 (498)
T ss_pred HHhhcccceEeccCCCccchhhhhhhcchhhhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEeccccccccee
Confidence 34568888999999999987767766665544 335677999999999998554 4 78889
Q ss_pred ceeeccCCCccccCCcccccCCCCCC
Q 005227 126 VTVRLRGNPFCLNTNAEQFCGSHSDD 151 (707)
Q Consensus 126 ~~l~l~~N~~~~~~~~~~~~~~~~~~ 151 (707)
.+|+|-+|||+|+|.+..+-+|....
T Consensus 349 ~~l~l~~Np~~CnC~l~wl~~Wlr~~ 374 (498)
T KOG4237|consen 349 STLNLLSNPFNCNCRLAWLGEWLRKK 374 (498)
T ss_pred eeeehccCcccCccchHHHHHHHhhC
Confidence 99999999999999999999998653
No 447
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.29 E-value=9.9e-12 Score=118.85 Aligned_cols=130 Identities=16% Similarity=0.109 Sum_probs=96.8
Q ss_pred cceEeeeCceEEEEEEeCCCcEEEEEEeccCChhhHHHHHHHHHHHHccCCCcce-eEEEEEEeCCeEEEEEecCCCCCH
Q 005227 380 STQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLV-SLVGYCDEEGEQMLVYEFMSNGTL 458 (707)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~nIv-~l~~~~~~~~~~~lV~E~~~~gsL 458 (707)
.+.++.|.++.||++... ++.|++|....... ....+..|+++++.+.+.+++ +++.+. ....++||||+++.++
T Consensus 3 ~~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~~--~~~~~lv~e~i~G~~l 78 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYFD--PETGVLITEFIEGSEL 78 (170)
T ss_pred eeecCCcccCceEEEEEC-CeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEEe--CCCCeEEEEecCCCcc
Confidence 467899999999999874 77899998765432 223567899999988655544 454443 3345899999999887
Q ss_pred HHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCC--CCCeEecCCCCCCEEEcCCCcEEEeeecccc
Q 005227 459 RDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEA--DPPVFHRDIKASNILLDHKFTAKVADFGLSR 524 (707)
Q Consensus 459 ~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~--~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~ 524 (707)
.+.. . ....++.+++++|+.||+.+ ...++|+|++|.||+++ ++.++++|||.+.
T Consensus 79 ~~~~-------~---~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~ 135 (170)
T cd05151 79 LTED-------F---SDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAG 135 (170)
T ss_pred cccc-------c---cCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEeccccc
Confidence 5430 1 11345678999999999876 22359999999999999 6689999999875
No 448
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.29 E-value=1.2e-11 Score=137.33 Aligned_cols=143 Identities=20% Similarity=0.189 Sum_probs=97.0
Q ss_pred cCCCccceEeeeCceEEEEEEeCC-CcEEEEEEeccCChh----------------------------------hH----
Q 005227 375 NNFNSSTQIGQGGYGKVYKGILPD-GTVVAVKRAQEGSLQ----------------------------------GE---- 415 (707)
Q Consensus 375 ~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~l~~~~~~----------------------------------~~---- 415 (707)
..|+. +.||+|++|.||+|++++ |+.||||+....-.. ..
T Consensus 120 ~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~ 198 (537)
T PRK04750 120 DDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLH 198 (537)
T ss_pred HhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHH
Confidence 45666 789999999999999987 999999998753110 01
Q ss_pred --HHHHHHHHHHHccC----CCcceeEEEEEE-eCCeEEEEEecCCCCCHHHHH--hhcCC--CCcCHHHHHHHHHHHHH
Q 005227 416 --KEFLTEIQFLSRLH----HRNLVSLVGYCD-EEGEQMLVYEFMSNGTLRDQL--SAKSK--EPLGFAMRLSIALGSSR 484 (707)
Q Consensus 416 --~~~~~E~~~l~~l~----h~nIv~l~~~~~-~~~~~~lV~E~~~~gsL~~~l--~~~~~--~~l~~~~~~~i~~~ia~ 484 (707)
-++.+|+..+.+++ +.+.+.+-.++. .....+|||||++|+.+.++- ...+. ..+.......++.|
T Consensus 199 ~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Q--- 275 (537)
T PRK04750 199 DELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQ--- 275 (537)
T ss_pred HhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHH---
Confidence 12445555555542 444444444443 245788999999999998753 22211 12333333333333
Q ss_pred HHHHHHhCCCCCeEecCCCCCCEEEcCCC----cEEEeeecccccCCC
Q 005227 485 GILYLHTEADPPVFHRDIKASNILLDHKF----TAKVADFGLSRLAPV 528 (707)
Q Consensus 485 gL~yLH~~~~~~ivH~Dlkp~NILl~~~~----~~kl~DFGla~~~~~ 528 (707)
+...+ ++|+|+||.||+++.++ ++++.|||++..+..
T Consensus 276 ----if~~G---ffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~ 316 (537)
T PRK04750 276 ----VFRDG---FFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNK 316 (537)
T ss_pred ----HHhCC---eeeCCCChHHeEEecCCCCCCeEEEEecceEEECCH
Confidence 34567 99999999999999888 999999999977653
No 449
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=99.29 E-value=1.8e-13 Score=144.97 Aligned_cols=141 Identities=23% Similarity=0.357 Sum_probs=124.0
Q ss_pred CCceEEEeeCCcCCCCCC-CcCCCCcccEEeccCCcCcccCCCccccc--CccEEEccCccCCCCCCc---ccCCCcccc
Q 005227 2 SKLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQLNGSIPPGRLSL--NITTIKLSNNKLTGTIPS---NFSGLPRLQ 75 (707)
Q Consensus 2 ~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~L~~N~l~g~ip~~~~~~--~L~~L~Ls~N~l~~~~p~---~~~~l~~L~ 75 (707)
.+|++|+|++|+|+.+.+ .|..|..|++|+|++|+++ .|-++.+.. +|+.|||++|.|+..+.+ .|.+|++|+
T Consensus 317 qkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~-~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f~gl~~Lr 395 (873)
T KOG4194|consen 317 QKLKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSID-HLAEGAFVGLSSLHKLDLRSNELSWCIEDAAVAFNGLPSLR 395 (873)
T ss_pred ccceeEeccccccccCChhHHHHHHHhhhhcccccchH-HHHhhHHHHhhhhhhhcCcCCeEEEEEecchhhhccchhhh
Confidence 579999999999999998 6999999999999999999 998887764 899999999999988765 588999999
Q ss_pred eEeccCcccccCCC-CcccccccCCCCccceEEccCccCCCCCCC-C-CCCCCceeeccCCCccccCCcccccCCCCC
Q 005227 76 RLFIANNSLSGSIP-SSIWQSRTLNATETFILDFQNNNLTNISGS-F-NIPPNVTVRLRGNPFCLNTNAEQFCGSHSD 150 (707)
Q Consensus 76 ~L~ls~N~l~g~~p-~~~~~l~~L~~~~l~~L~l~~N~l~~~~~~-~-~~~~l~~l~l~~N~~~~~~~~~~~~~~~~~ 150 (707)
.|+|.+|+|. .|| .+|.++..|+ +|||.+|.|.++-+. + .+ .|..|.+..-.|-|+|++..+-.|.-.
T Consensus 396 kL~l~gNqlk-~I~krAfsgl~~LE-----~LdL~~NaiaSIq~nAFe~m-~Lk~Lv~nSssflCDCql~Wl~qWl~~ 466 (873)
T KOG4194|consen 396 KLRLTGNQLK-SIPKRAFSGLEALE-----HLDLGDNAIASIQPNAFEPM-ELKELVMNSSSFLCDCQLKWLAQWLYR 466 (873)
T ss_pred heeecCceee-ecchhhhccCcccc-----eecCCCCcceeecccccccc-hhhhhhhcccceEEeccHHHHHHHHHh
Confidence 9999999999 666 4677777666 999999999998554 4 45 888999999999999999999888743
No 450
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.26 E-value=6.9e-12 Score=135.60 Aligned_cols=248 Identities=21% Similarity=0.230 Sum_probs=178.6
Q ss_pred CCCccceEee--eCceEEEEEEe---CCCcEEEEEEecc--CChhhHHHHHHHHHHHHcc-CCCcceeEEEEEEeCCeEE
Q 005227 376 NFNSSTQIGQ--GGYGKVYKGIL---PDGTVVAVKRAQE--GSLQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQM 447 (707)
Q Consensus 376 ~~~~~~~lG~--G~fg~Vy~~~~---~~~~~vavK~l~~--~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~ 447 (707)
.|.+...+|. |.+|.||.+.. .++..+|+|+-+. ........=.+|+...+.+ .|+|.++.+..+...+..+
T Consensus 115 ~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~lf 194 (524)
T KOG0601|consen 115 RFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGILF 194 (524)
T ss_pred hcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCcce
Confidence 4556788999 99999999986 3688899997432 2222223345677776677 4999999888899999999
Q ss_pred EEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHH----HHHHHHhCCCCCeEecCCCCCCEEEcCC-CcEEEeeecc
Q 005227 448 LVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSR----GILYLHTEADPPVFHRDIKASNILLDHK-FTAKVADFGL 522 (707)
Q Consensus 448 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~----gL~yLH~~~~~~ivH~Dlkp~NILl~~~-~~~kl~DFGl 522 (707)
+-+|++ +.+|.++.+.... .++....+.+..+..+ ||.++|+.. ++|-|+||.||+...+ ...+++|||+
T Consensus 195 iqtE~~-~~sl~~~~~~~~~-~~p~~~l~~~~~~~~~~~~~al~~~hs~~---~~~~~~kp~~i~~~~~~~s~~~~df~~ 269 (524)
T KOG0601|consen 195 IQTELC-GESLQSYCHTPCN-FLPDNLLWNSLRDWLSRDVTALSHLHSNN---IVHDDLKPANIFTTSDWTSCKLTDFGL 269 (524)
T ss_pred eeeccc-cchhHHhhhcccc-cCCchhhhhHHhhhhhcccccccccCCCc---ccccccchhheecccccceeecCCcce
Confidence 999998 5788888765432 3666777788888888 999999998 9999999999999999 8999999999
Q ss_pred cccCCCCCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhcccc
Q 005227 523 SRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMM 602 (707)
Q Consensus 523 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~~ 602 (707)
.......+..... .......|...|++||...+ .++...|+|++|.+..|..++..+...+.+. .|
T Consensus 270 v~~i~~~~~~~~~--~~~~r~~~~~~Y~~ke~~~~-l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~-~W---------- 335 (524)
T KOG0601|consen 270 VSKISDGNFSSVF--KVSKRPEGDCIYAAKELLNG-LATFASDIFSLGEVILEAILGSHLPSVGKNS-SW---------- 335 (524)
T ss_pred eEEccCCccccce--eeeecCCCCceEeChhhhcc-ccchHhhhcchhhhhHhhHhhcccccCCCCC-Cc----------
Confidence 9887665533221 11223357788999998764 5678999999999999999987776544221 00
Q ss_pred hhhccCCC--CCCChHHHHHHHHHHHHhcccCCCCCCCHHHHH
Q 005227 603 FSVIDGNM--GSYPSECVEKFIKLALKCCQDETDARPSMSEVM 643 (707)
Q Consensus 603 ~~~~~~~~--~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~ 643 (707)
.-+++.. .++-+.-...+......+++.++..|++.+.+.
T Consensus 336 -~~~r~~~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~ 377 (524)
T KOG0601|consen 336 -SQLRQGYIPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILT 377 (524)
T ss_pred -cccccccCchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHh
Confidence 0001100 001111234445577888888888888876654
No 451
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.25 E-value=2.5e-12 Score=145.46 Aligned_cols=269 Identities=19% Similarity=0.230 Sum_probs=181.1
Q ss_pred HhcCCCccceEeeeCceEEEEEEeC-CCcEEEEEEeccCCh---hhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEE
Q 005227 373 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 448 (707)
Q Consensus 373 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~l 448 (707)
..+.+.+.+.+-+|.++.++.+.-. .|...++|....... ..-+....+-.++-..+||-+++..-.+.-....+|
T Consensus 802 S~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~L 881 (1205)
T KOG0606|consen 802 SPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLPL 881 (1205)
T ss_pred CCccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcch
Confidence 4456677778889999999887732 343344443322111 111222333333333456766665555555667899
Q ss_pred EEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCC
Q 005227 449 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 528 (707)
Q Consensus 449 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~ 528 (707)
|++|..+++|...|+..+ ..+....+.....+.++++|||... +.|+|++|.|.+...++..+++|||.......
T Consensus 882 ~~~~~~~~~~~Skl~~~~--~~saepaRs~i~~~vqs~e~L~s~~---r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~ 956 (1205)
T KOG0606|consen 882 VGHYLNGGDLPSKLHNSG--CLSAEPARSPILERVQSLESLHSSL---RKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGL 956 (1205)
T ss_pred hhHHhccCCchhhhhcCC--CcccccccchhHHHHhhhhccccch---hhcccccccchhhcccCCcccCcccccccccc
Confidence 999999999999997654 4555566667777889999999987 89999999999999999999999984332110
Q ss_pred C----CC-----------------CC---ccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCCC
Q 005227 529 P----DI-----------------EG---IVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPIS 584 (707)
Q Consensus 529 ~----~~-----------------~~---~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~ 584 (707)
. +. .. ...........||+.|.+||...+......+|+|++|++++|.++|..||.
T Consensus 957 ~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~n 1036 (1205)
T KOG0606|consen 957 IPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFN 1036 (1205)
T ss_pred ccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCC
Confidence 0 00 00 001122445678999999999999999999999999999999999999996
Q ss_pred CCchhHHHHHHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCccc
Q 005227 585 HGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFI 664 (707)
Q Consensus 585 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~~~L~~~~~~~~~~~~~~~dll 664 (707)
...... .+..+..+ +. ..-......++...+++
T Consensus 1037 a~tpq~----------~f~ni~~~-----------------------~~--------------~~p~g~~~~s~~aq~~~ 1069 (1205)
T KOG0606|consen 1037 AETPQQ----------IFENILNR-----------------------DI--------------PWPEGPEEGSYEAQDLI 1069 (1205)
T ss_pred Ccchhh----------hhhccccC-----------------------CC--------------CCCCCccccChhhhhhh
Confidence 433200 00000000 00 00011122345566788
Q ss_pred cCCCCCCCCCCCCCC---cCCCCCCCCCCCCC
Q 005227 665 NSEHTSKEETPPSSS---SMLKHPYVSSDVSG 693 (707)
Q Consensus 665 ~~~L~~dP~~R~sa~---e~L~Hp~f~~~~~~ 693 (707)
..+++.+|.+|..+. +.-.||||....++
T Consensus 1070 ~~ll~~~~~qr~~a~~~~e~k~~~~~~~~~~~ 1101 (1205)
T KOG0606|consen 1070 NRLLTEEPTQRLGAKGAAEVKGHPFFQDVDWE 1101 (1205)
T ss_pred hhhhccCchhccCcccccccccCCccCCCCcc
Confidence 899999999999988 88899999988875
No 452
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=99.20 E-value=1.3e-12 Score=133.06 Aligned_cols=122 Identities=35% Similarity=0.511 Sum_probs=101.5
Q ss_pred EEeeCCcCCCCCCCcCCCCcccEEeccCCcCcccCCCccccc-CccEEEccCccCCCCCCcccCCCcccceEeccCcccc
Q 005227 7 LSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSL-NITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLS 85 (707)
Q Consensus 7 L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~g~ip~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~ 85 (707)
+.+++|.++-.+..+..+++|+.|+|++|-+. .+|.+.+.. .|+.||||+|+|. .+|..+-.+..|+.+-.++|++.
T Consensus 417 l~lsnn~isfv~~~l~~l~kLt~L~L~NN~Ln-~LP~e~~~lv~Lq~LnlS~NrFr-~lP~~~y~lq~lEtllas~nqi~ 494 (565)
T KOG0472|consen 417 LVLSNNKISFVPLELSQLQKLTFLDLSNNLLN-DLPEEMGSLVRLQTLNLSFNRFR-MLPECLYELQTLETLLASNNQIG 494 (565)
T ss_pred HHhhcCccccchHHHHhhhcceeeecccchhh-hcchhhhhhhhhheecccccccc-cchHHHhhHHHHHHHHhcccccc
Confidence 45556665544346788889999999999999 999888887 7999999999998 88888888888888888888987
Q ss_pred cCCCCc-ccccccCCCCccceEEccCccCCCCCCCC-CCCCCceeeccCCCcc
Q 005227 86 GSIPSS-IWQSRTLNATETFILDFQNNNLTNISGSF-NIPPNVTVRLRGNPFC 136 (707)
Q Consensus 86 g~~p~~-~~~l~~L~~~~l~~L~l~~N~l~~~~~~~-~~~~l~~l~l~~N~~~ 136 (707)
.++.+ +.+|.+|. .|||.+|.|..+|+.+ ++.++++|.+.||||.
T Consensus 495 -~vd~~~l~nm~nL~-----tLDL~nNdlq~IPp~LgnmtnL~hLeL~gNpfr 541 (565)
T KOG0472|consen 495 -SVDPSGLKNMRNLT-----TLDLQNNDLQQIPPILGNMTNLRHLELDGNPFR 541 (565)
T ss_pred -ccChHHhhhhhhcc-----eeccCCCchhhCChhhccccceeEEEecCCccC
Confidence 66555 77766655 9999999999999998 9999999999999996
No 453
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.18 E-value=1.8e-11 Score=132.35 Aligned_cols=245 Identities=20% Similarity=0.241 Sum_probs=172.3
Q ss_pred HHHHhcCCCccceEeeeCceEEEEEEeC--CCcEEEEEEeccCChhhHHH--HHHHHHHHHcc-CCCcceeEEEEEEeCC
Q 005227 370 MALATNNFNSSTQIGQGGYGKVYKGILP--DGTVVAVKRAQEGSLQGEKE--FLTEIQFLSRL-HHRNLVSLVGYCDEEG 444 (707)
Q Consensus 370 l~~~~~~~~~~~~lG~G~fg~Vy~~~~~--~~~~vavK~l~~~~~~~~~~--~~~E~~~l~~l-~h~nIv~l~~~~~~~~ 444 (707)
......+|.....||.|.|+.|++...+ ++..|++|.+.........+ -..|+-+...+ .|.++++.+..+....
T Consensus 260 ~s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r 339 (524)
T KOG0601|consen 260 TSCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLR 339 (524)
T ss_pred ceeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccc
Confidence 3445668888999999999999998743 68899999876543332222 24566665555 5888998888887777
Q ss_pred eEEEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCC-CcEEEeeeccc
Q 005227 445 EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHK-FTAKVADFGLS 523 (707)
Q Consensus 445 ~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~-~~~kl~DFGla 523 (707)
..++=-||++++++.... .....+++..++.+..|++.++.++|+.. ++|+|+||+||++..+ +..+++|||.+
T Consensus 340 ~~~ip~e~~~~~s~~l~~--~~~~~~d~~~~~~~~~q~~~~l~~i~s~~---~~~~d~~psni~i~~~~~~~~~~~~~~~ 414 (524)
T KOG0601|consen 340 QGYIPLEFCEGGSSSLRS--VTSQMLDEDPRLRLTAQILTALNVIHSKL---FVHLDVKPSNILISNDGFFSKLGDFGCW 414 (524)
T ss_pred cccCchhhhcCcchhhhh--HHHHhcCcchhhhhHHHHHhccccccchh---hhcccccccceeeccchhhhhccccccc
Confidence 888999999999987665 33445788889999999999999999988 9999999999999886 88899999988
Q ss_pred ccCCCCCCCCccccceecccccCCCcc--chhhhccCCCCCchhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHhhccc
Q 005227 524 RLAPVPDIEGIVPAHVSTVVKGTPGYL--DPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSM 601 (707)
Q Consensus 524 ~~~~~~~~~~~~~~~~~~~~~gt~~y~--aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf~~~~~~~~~~~~~~~~~~ 601 (707)
..+... . ....+.-++. +++......+..+.|++|||..+.|.+++...-.....
T Consensus 415 t~~~~~---------~-~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~~------------- 471 (524)
T KOG0601|consen 415 TRLAFS---------S-GVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGVQ------------- 471 (524)
T ss_pred ccccee---------c-ccccccccccccchhhccccccccccccccccccccccccCcccCccccc-------------
Confidence 642211 1 1111223333 55555667888999999999999999998543322111
Q ss_pred chhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHH
Q 005227 602 MFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVM 643 (707)
Q Consensus 602 ~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPt~~~v~ 643 (707)
...+..+.....+... ..+..+.......++..||.+.++.
T Consensus 472 ~~~i~~~~~p~~~~~~-~~~q~~~kv~~~~~~~~~~l~~~l~ 512 (524)
T KOG0601|consen 472 SLTIRSGDTPNLPGLK-LQLQVLLKVMINPDRKRRPSAVELS 512 (524)
T ss_pred ceeeecccccCCCchH-HhhhhhhhhhcCCccccchhhhhhc
Confidence 1222222233333333 5566666666667777777665543
No 454
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.17 E-value=2e-11 Score=115.61 Aligned_cols=122 Identities=29% Similarity=0.465 Sum_probs=41.9
Q ss_pred eeCCcCCCCCCCcCCCCcccEEeccCCcCcccCCCccccc-CccEEEccCccCCCCCCcccCCCcccceEeccCcccccC
Q 005227 9 LRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSL-NITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGS 87 (707)
Q Consensus 9 L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~g~ip~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~ 87 (707)
|..|.|. ..+.+.+..++++|+|++|+|+ .|..-...+ +|+.|+|++|+|+ .++ .+..+++|+.|++++|+|+ .
T Consensus 4 lt~~~i~-~~~~~~n~~~~~~L~L~~n~I~-~Ie~L~~~l~~L~~L~Ls~N~I~-~l~-~l~~L~~L~~L~L~~N~I~-~ 78 (175)
T PF14580_consen 4 LTANMIE-QIAQYNNPVKLRELNLRGNQIS-TIENLGATLDKLEVLDLSNNQIT-KLE-GLPGLPRLKTLDLSNNRIS-S 78 (175)
T ss_dssp ----------------------------------S--TT-TT--EEE-TTS--S---T-T----TT--EEE--SS----S
T ss_pred ccccccc-cccccccccccccccccccccc-cccchhhhhcCCCEEECCCCCCc-ccc-CccChhhhhhcccCCCCCC-c
Confidence 4444444 3345667778999999999999 886422233 8999999999999 565 5888999999999999999 6
Q ss_pred CCCccc-ccccCCCCccceEEccCccCCCCCCCC---CCCCCceeeccCCCccccCC
Q 005227 88 IPSSIW-QSRTLNATETFILDFQNNNLTNISGSF---NIPPNVTVRLRGNPFCLNTN 140 (707)
Q Consensus 88 ~p~~~~-~l~~L~~~~l~~L~l~~N~l~~~~~~~---~~~~l~~l~l~~N~~~~~~~ 140 (707)
++..+. .+++|+ .|+|++|+|..+.... .+++|..|+|.+||++....
T Consensus 79 i~~~l~~~lp~L~-----~L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~~~~~ 130 (175)
T PF14580_consen 79 ISEGLDKNLPNLQ-----ELYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVCEKKN 130 (175)
T ss_dssp -CHHHHHH-TT-------EEE-TTS---SCCCCGGGGG-TT--EEE-TT-GGGGSTT
T ss_pred cccchHHhCCcCC-----EEECcCCcCCChHHhHHHHcCCCcceeeccCCcccchhh
Confidence 665443 455554 9999999999875532 78999999999999865433
No 455
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.14 E-value=3.7e-12 Score=135.16 Aligned_cols=131 Identities=30% Similarity=0.449 Sum_probs=99.6
Q ss_pred ceEEEeeCCcCCCCCCCcCCCCcccEEeccCCcCcccCCCcccccCccEEEccCccCCCCCCcccCCCcccceEeccCcc
Q 005227 4 LLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNS 83 (707)
Q Consensus 4 L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~g~ip~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~ 83 (707)
|+.|.|++|.+..+++.+.+|..|++|||+.|+++ .+|..++.+-|+.|.+++|+++ .+|..++.+..|..||.+.|+
T Consensus 100 Le~liLy~n~~r~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lpLkvli~sNNkl~-~lp~~ig~~~tl~~ld~s~ne 177 (722)
T KOG0532|consen 100 LESLILYHNCIRTIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLPLKVLIVSNNKLT-SLPEEIGLLPTLAHLDVSKNE 177 (722)
T ss_pred HHHHHHHhccceecchhhhhhhHHHHhhhccchhh-cCChhhhcCcceeEEEecCccc-cCCcccccchhHHHhhhhhhh
Confidence 45556666777655666777777777777777777 7777777777777777777777 777777777777777777777
Q ss_pred cccCCCCcccccccCCC-----------------CccceEEccCccCCCCCCCC-CCCCCceeeccCCCccc
Q 005227 84 LSGSIPSSIWQSRTLNA-----------------TETFILDFQNNNLTNISGSF-NIPPNVTVRLRGNPFCL 137 (707)
Q Consensus 84 l~g~~p~~~~~l~~L~~-----------------~~l~~L~l~~N~l~~~~~~~-~~~~l~~l~l~~N~~~~ 137 (707)
+. .+|..++.+.+|+. ..|..||+|+|+++.+|-.+ .|..|+.|.|.+||+..
T Consensus 178 i~-slpsql~~l~slr~l~vrRn~l~~lp~El~~LpLi~lDfScNkis~iPv~fr~m~~Lq~l~LenNPLqS 248 (722)
T KOG0532|consen 178 IQ-SLPSQLGYLTSLRDLNVRRNHLEDLPEELCSLPLIRLDFSCNKISYLPVDFRKMRHLQVLQLENNPLQS 248 (722)
T ss_pred hh-hchHHhhhHHHHHHHHHhhhhhhhCCHHHhCCceeeeecccCceeecchhhhhhhhheeeeeccCCCCC
Confidence 76 66666666555421 23568999999999999998 89999999999999853
No 456
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.14 E-value=5.8e-10 Score=103.94 Aligned_cols=131 Identities=22% Similarity=0.305 Sum_probs=99.9
Q ss_pred ceEeeeCceEEEEEEeCCCcEEEEEEeccCChh--------hHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEEec
Q 005227 381 TQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQ--------GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 452 (707)
Q Consensus 381 ~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~--------~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~E~ 452 (707)
..+++|+-+.+|.+.+. |..+++|.-....-. ...+-.+|++++.+++--.|...+=+..+.+...|+|||
T Consensus 2 ~~i~~GAEa~i~~~~~~-g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~ 80 (204)
T COG3642 2 DLIKQGAEAIIYLTDFL-GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEY 80 (204)
T ss_pred chhhCCcceeEEeeecc-CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEE
Confidence 35789999999999874 444677754332211 123457799999998766665556667778888999999
Q ss_pred CCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeeccccc
Q 005227 453 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRL 525 (707)
Q Consensus 453 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~ 525 (707)
++|-.|.+.+... ...++..+-.-+.-||..+ |+|+||.++||.+..+. +.++|||++..
T Consensus 81 I~G~~lkd~l~~~---------~~~~~r~vG~~vg~lH~~g---ivHGDLTtsNiIl~~~~-i~~IDfGLg~~ 140 (204)
T COG3642 81 IEGELLKDALEEA---------RPDLLREVGRLVGKLHKAG---IVHGDLTTSNIILSGGR-IYFIDFGLGEF 140 (204)
T ss_pred eCChhHHHHHHhc---------chHHHHHHHHHHHHHHhcC---eecCCCccceEEEeCCc-EEEEECCcccc
Confidence 9999999888654 2345666666778899999 99999999999998775 99999999975
No 457
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.14 E-value=6.9e-10 Score=107.29 Aligned_cols=136 Identities=18% Similarity=0.099 Sum_probs=97.9
Q ss_pred ceEeeeCceEEEEEEeCC-------CcEEEEEEeccCC----------------------hhhHHH----HHHHHHHHHc
Q 005227 381 TQIGQGGYGKVYKGILPD-------GTVVAVKRAQEGS----------------------LQGEKE----FLTEIQFLSR 427 (707)
Q Consensus 381 ~~lG~G~fg~Vy~~~~~~-------~~~vavK~l~~~~----------------------~~~~~~----~~~E~~~l~~ 427 (707)
..||.|.-+.||.|...+ +..+|||+.+... ....+. ..+|++.|++
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 468999999999998543 4799999764210 001122 3489999999
Q ss_pred cCC--CcceeEEEEEEeCCeEEEEEecCCCCCHH-HHHhhcCCCCcCHHHHHHHHHHHHHHHHHH-HhCCCCCeEecCCC
Q 005227 428 LHH--RNLVSLVGYCDEEGEQMLVYEFMSNGTLR-DQLSAKSKEPLGFAMRLSIALGSSRGILYL-HTEADPPVFHRDIK 503 (707)
Q Consensus 428 l~h--~nIv~l~~~~~~~~~~~lV~E~~~~gsL~-~~l~~~~~~~l~~~~~~~i~~~ia~gL~yL-H~~~~~~ivH~Dlk 503 (707)
+.. -++.+++++ ...++||||+.+..+. ..+++ ..++......+..+++.+|..+ |..+ +||+||+
T Consensus 83 l~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd---~~~~~~~~~~i~~~i~~~l~~l~H~~g---lVHGDLs 152 (197)
T cd05146 83 MQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKD---AKLNDEEMKNAYYQVLSMMKQLYKECN---LVHADLS 152 (197)
T ss_pred HHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhc---cccCHHHHHHHHHHHHHHHHHHHHhCC---eecCCCC
Confidence 853 355566654 4678999999764332 22322 1244556677889999999999 7888 9999999
Q ss_pred CCCEEEcCCCcEEEeeecccccCC
Q 005227 504 ASNILLDHKFTAKVADFGLSRLAP 527 (707)
Q Consensus 504 p~NILl~~~~~~kl~DFGla~~~~ 527 (707)
+.||++++ +.+.|+|||.|....
T Consensus 153 ~~NIL~~~-~~v~iIDF~qav~~~ 175 (197)
T cd05146 153 EYNMLWHD-GKVWFIDVSQSVEPT 175 (197)
T ss_pred HHHEEEEC-CcEEEEECCCceeCC
Confidence 99999974 689999999887553
No 458
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.14 E-value=8.4e-10 Score=102.22 Aligned_cols=143 Identities=22% Similarity=0.233 Sum_probs=108.1
Q ss_pred ccceEeeeCceEEEEEEeCCCcEEEEEEeccCCh--------hhHHHHHHHHHHHHccCCCcceeEEEEEEeCCeEEEEE
Q 005227 379 SSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSL--------QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 450 (707)
Q Consensus 379 ~~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~--------~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~ 450 (707)
....+-+|+-+.|+++.+ .|+.+.||.-..... -..++-.+|++.+.+++--.|.-..-++.+...-.|+|
T Consensus 11 ~l~likQGAEArv~~~~~-~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~M 89 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSF-SGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYM 89 (229)
T ss_pred cceeeeccceeeEeeecc-CCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEE
Confidence 577899999999999998 577777775432211 12346778999999886555555555677777788999
Q ss_pred ecCCC-CCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCC---cEEEeeeccccc
Q 005227 451 EFMSN-GTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKF---TAKVADFGLSRL 525 (707)
Q Consensus 451 E~~~~-gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~---~~kl~DFGla~~ 525 (707)
||+++ .++.+++...............++..|-+.+.-||..+ |+|+||..+||++.+++ .+.++|||++..
T Consensus 90 E~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~nd---iiHGDLTTSNill~~~~~~~~~~lIdfgls~~ 165 (229)
T KOG3087|consen 90 EFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDND---IIHGDLTTSNILLRSDGNQITPILIDFGLSSV 165 (229)
T ss_pred EeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhCC---eecccccccceEEecCCCcCceEEEeecchhc
Confidence 99966 47888887654433334444788888999999999999 99999999999997654 358999999864
No 459
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.13 E-value=3e-10 Score=113.55 Aligned_cols=143 Identities=22% Similarity=0.344 Sum_probs=110.8
Q ss_pred cceEeeeCceEEEEEEeCCCcEEEEEEeccCCh-hhHHHHHHHHHHHHccCCC--cceeEEEEEEeC---CeEEEEEecC
Q 005227 380 STQIGQGGYGKVYKGILPDGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHR--NLVSLVGYCDEE---GEQMLVYEFM 453 (707)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~--nIv~l~~~~~~~---~~~~lV~E~~ 453 (707)
.+.|+.|.++.||++...+|+.+++|....... .....+.+|+++++.+++. .+.+++.+.... +..++||||+
T Consensus 3 ~~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i 82 (223)
T cd05154 3 VRQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERV 82 (223)
T ss_pred ceecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEe
Confidence 367899999999999987778999998765332 1345788999999999763 456777777654 2568999999
Q ss_pred CCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCC----------------------------------------
Q 005227 454 SNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEA---------------------------------------- 493 (707)
Q Consensus 454 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~---------------------------------------- 493 (707)
+|.++.+.+.. ..++......++.+++++|.+||+..
T Consensus 83 ~G~~l~~~~~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (223)
T cd05154 83 DGRVLRDRLLR---PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMER 159 (223)
T ss_pred CCEecCCCCCC---CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHH
Confidence 99888775531 34677778888888888888888521
Q ss_pred -------------CCCeEecCCCCCCEEEcC--CCcEEEeeeccccc
Q 005227 494 -------------DPPVFHRDIKASNILLDH--KFTAKVADFGLSRL 525 (707)
Q Consensus 494 -------------~~~ivH~Dlkp~NILl~~--~~~~kl~DFGla~~ 525 (707)
...++|+|+++.||+++. ++.+.|+||+.+..
T Consensus 160 ~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 160 LLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred HHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 244899999999999998 66789999998753
No 460
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.12 E-value=4.5e-12 Score=141.47 Aligned_cols=125 Identities=35% Similarity=0.492 Sum_probs=109.8
Q ss_pred CCceEEEeeCCcCCCC-CCCcCCCCcccEEeccCCcCcccCCCccccc--CccEEEccCccCCCCCCcccCCCcccceEe
Q 005227 2 SKLLKLSLRNCSLQGP-MPDLSRIPNLGYLDLSSNQLNGSIPPGRLSL--NITTIKLSNNKLTGTIPSNFSGLPRLQRLF 78 (707)
Q Consensus 2 ~~L~~L~L~~N~l~~~-~~~~~~l~~L~~L~L~~N~l~g~ip~~~~~~--~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 78 (707)
+.|+.|+|.+|.|+.. .|-|-+..+|+.|+|++|+|. ++|...... .|+.|+||+|+|+ .+|.++.++.+|++|.
T Consensus 359 ~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~-~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~ 436 (1081)
T KOG0618|consen 359 AALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLN-SFPASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLHTLR 436 (1081)
T ss_pred HHHHHHHHhcCcccccchhhhccccceeeeeecccccc-cCCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhHHHh
Confidence 3578899999999974 478999999999999999999 999877664 8999999999999 8999999999999999
Q ss_pred ccCcccccCCCCcccccccCCCCccceEEccCccCCCC--CCCCCCCCCceeeccCCCc
Q 005227 79 IANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNI--SGSFNIPPNVTVRLRGNPF 135 (707)
Q Consensus 79 ls~N~l~g~~p~~~~~l~~L~~~~l~~L~l~~N~l~~~--~~~~~~~~l~~l~l~~N~~ 135 (707)
..+|+|. .+| .+.+++.|+ .+|||.|+|+.+ +.....|+|+.|+|+||++
T Consensus 437 ahsN~l~-~fP-e~~~l~qL~-----~lDlS~N~L~~~~l~~~~p~p~LkyLdlSGN~~ 488 (1081)
T KOG0618|consen 437 AHSNQLL-SFP-ELAQLPQLK-----VLDLSCNNLSEVTLPEALPSPNLKYLDLSGNTR 488 (1081)
T ss_pred hcCCcee-ech-hhhhcCcce-----EEecccchhhhhhhhhhCCCcccceeeccCCcc
Confidence 9999999 899 677666555 999999999975 4444668999999999996
No 461
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.12 E-value=8.4e-11 Score=135.04 Aligned_cols=15 Identities=27% Similarity=0.286 Sum_probs=7.8
Q ss_pred CceEEEeeCCcCCCC
Q 005227 3 KLLKLSLRNCSLQGP 17 (707)
Q Consensus 3 ~L~~L~L~~N~l~~~ 17 (707)
+|+.|+|++|+|+++
T Consensus 303 ~L~~LdLS~N~L~~L 317 (788)
T PRK15387 303 GLQELSVSDNQLASL 317 (788)
T ss_pred ccceeECCCCccccC
Confidence 455555555555543
No 462
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.07 E-value=8.7e-11 Score=111.27 Aligned_cols=119 Identities=26% Similarity=0.441 Sum_probs=50.0
Q ss_pred CceEEEeeCCcCCCCCCCcC-CCCcccEEeccCCcCcccCCCccccc-CccEEEccCccCCCCCCccc-CCCcccceEec
Q 005227 3 KLLKLSLRNCSLQGPMPDLS-RIPNLGYLDLSSNQLNGSIPPGRLSL-NITTIKLSNNKLTGTIPSNF-SGLPRLQRLFI 79 (707)
Q Consensus 3 ~L~~L~L~~N~l~~~~~~~~-~l~~L~~L~L~~N~l~g~ip~~~~~~-~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~l 79 (707)
+++.|+|++|+|+.+ ..++ .+.+|+.|+|++|.|+ .|+. +..+ .|+.|+|++|+|+ .+...+ ..+++|+.|+|
T Consensus 20 ~~~~L~L~~n~I~~I-e~L~~~l~~L~~L~Ls~N~I~-~l~~-l~~L~~L~~L~L~~N~I~-~i~~~l~~~lp~L~~L~L 95 (175)
T PF14580_consen 20 KLRELNLRGNQISTI-ENLGATLDKLEVLDLSNNQIT-KLEG-LPGLPRLKTLDLSNNRIS-SISEGLDKNLPNLQELYL 95 (175)
T ss_dssp -----------------S--TT-TT--EEE-TTS--S---TT-----TT--EEE--SS----S-CHHHHHH-TT--EEE-
T ss_pred ccccccccccccccc-cchhhhhcCCCEEECCCCCCc-cccC-ccChhhhhhcccCCCCCC-ccccchHHhCCcCCEEEC
Confidence 578999999999965 4566 5899999999999999 8874 3333 8999999999999 566555 46899999999
Q ss_pred cCcccccCCCCcccccccCCCCccceEEccCccCCCCCCC----C-CCCCCceee
Q 005227 80 ANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGS----F-NIPPNVTVR 129 (707)
Q Consensus 80 s~N~l~g~~p~~~~~l~~L~~~~l~~L~l~~N~l~~~~~~----~-~~~~l~~l~ 129 (707)
++|+|. .+-+ +..+.. +++|+.|+|.+|.++..+.. + .+|+|+.|+
T Consensus 96 ~~N~I~-~l~~-l~~L~~--l~~L~~L~L~~NPv~~~~~YR~~vi~~lP~Lk~LD 146 (175)
T PF14580_consen 96 SNNKIS-DLNE-LEPLSS--LPKLRVLSLEGNPVCEKKNYRLFVIYKLPSLKVLD 146 (175)
T ss_dssp TTS----SCCC-CGGGGG---TT--EEE-TT-GGGGSTTHHHHHHHH-TT-SEET
T ss_pred cCCcCC-ChHH-hHHHHc--CCCcceeeccCCcccchhhHHHHHHHHcChhheeC
Confidence 999998 4432 444433 34666999999999976542 1 788888775
No 463
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.05 E-value=1.6e-11 Score=120.58 Aligned_cols=127 Identities=24% Similarity=0.290 Sum_probs=99.6
Q ss_pred CceEEEeeCCcCCCCCCCcCCCCcccEEeccCCcCcccCCCcccccCccEEEccCccCCCCCCcccCCCcccceEeccCc
Q 005227 3 KLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANN 82 (707)
Q Consensus 3 ~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~g~ip~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N 82 (707)
.|+.||||+|.|+.+-.+..-++.++.|+||+|.|. .+..-....+|+.||||+|.++ .+-.+-..|-+.+.|.|+.|
T Consensus 285 ~LtelDLS~N~I~~iDESvKL~Pkir~L~lS~N~i~-~v~nLa~L~~L~~LDLS~N~Ls-~~~Gwh~KLGNIKtL~La~N 362 (490)
T KOG1259|consen 285 ELTELDLSGNLITQIDESVKLAPKLRRLILSQNRIR-TVQNLAELPQLQLLDLSGNLLA-ECVGWHLKLGNIKTLKLAQN 362 (490)
T ss_pred hhhhccccccchhhhhhhhhhccceeEEecccccee-eehhhhhcccceEeecccchhH-hhhhhHhhhcCEeeeehhhh
Confidence 478899999999877777777889999999999999 7776323238999999999998 66666677888899999999
Q ss_pred ccccCCCCcccccccCCCCccceEEccCccCCCCCCC--C-CCCCCceeeccCCCcccc
Q 005227 83 SLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGS--F-NIPPNVTVRLRGNPFCLN 138 (707)
Q Consensus 83 ~l~g~~p~~~~~l~~L~~~~l~~L~l~~N~l~~~~~~--~-~~~~l~~l~l~~N~~~~~ 138 (707)
.|. . +..+.+|- +|..||+++|+|..+... + .+|-|+.+.|.+||+...
T Consensus 363 ~iE-~----LSGL~KLY--SLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~~ 414 (490)
T KOG1259|consen 363 KIE-T----LSGLRKLY--SLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAGS 414 (490)
T ss_pred hHh-h----hhhhHhhh--hheeccccccchhhHHHhcccccccHHHHHhhcCCCcccc
Confidence 987 3 33344332 455899999999987553 3 789999999999998644
No 464
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.05 E-value=1.3e-11 Score=125.77 Aligned_cols=139 Identities=24% Similarity=0.401 Sum_probs=117.1
Q ss_pred CceEEEeeCCcCCCCCC-CcCCCCcccEEeccCCcCcccCCCccccc--Cc-cEEEccCccCCCCCCcccCCCcccceEe
Q 005227 3 KLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQLNGSIPPGRLSL--NI-TTIKLSNNKLTGTIPSNFSGLPRLQRLF 78 (707)
Q Consensus 3 ~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~L~~N~l~g~ip~~~~~~--~L-~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 78 (707)
.-+.|+|..|+|+.+|+ .|+.+++|+.||||+|+|+ .|-+..|.. +| +-+++++|+|+...-..|++|.+|+.|.
T Consensus 68 ~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is-~I~p~AF~GL~~l~~Lvlyg~NkI~~l~k~~F~gL~slqrLl 146 (498)
T KOG4237|consen 68 ETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNIS-FIAPDAFKGLASLLSLVLYGNNKITDLPKGAFGGLSSLQRLL 146 (498)
T ss_pred cceEEEeccCCcccCChhhccchhhhceecccccchh-hcChHhhhhhHhhhHHHhhcCCchhhhhhhHhhhHHHHHHHh
Confidence 35789999999999998 7999999999999999999 888776654 54 4556666999955556899999999999
Q ss_pred ccCcccccCCCCcccccccCCCCccceEEccCccCCCCCCC-C-CCCCCceeeccCCCccccCCcccccCC
Q 005227 79 IANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGS-F-NIPPNVTVRLRGNPFCLNTNAEQFCGS 147 (707)
Q Consensus 79 ls~N~l~g~~p~~~~~l~~L~~~~l~~L~l~~N~l~~~~~~-~-~~~~l~~l~l~~N~~~~~~~~~~~~~~ 147 (707)
++-|++.-...+.+..+++|+ .|.|-+|.+..++.. + .+..++++.+..||+.|+|++..+...
T Consensus 147 lNan~i~Cir~~al~dL~~l~-----lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~icdCnL~wla~~ 212 (498)
T KOG4237|consen 147 LNANHINCIRQDALRDLPSLS-----LLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFICDCNLPWLADD 212 (498)
T ss_pred cChhhhcchhHHHHHHhhhcc-----hhcccchhhhhhccccccchhccchHhhhcCccccccccchhhhH
Confidence 999999955556777777776 799999999999874 4 888999999999999999998876543
No 465
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.01 E-value=1.1e-09 Score=126.13 Aligned_cols=17 Identities=18% Similarity=0.231 Sum_probs=10.4
Q ss_pred ccceEEccCccCCCCCC
Q 005227 102 ETFILDFQNNNLTNISG 118 (707)
Q Consensus 102 ~l~~L~l~~N~l~~~~~ 118 (707)
+|+.|+|++|+|+.+|.
T Consensus 343 ~Lq~LdLS~N~Ls~LP~ 359 (788)
T PRK15387 343 GLQELSVSDNQLASLPT 359 (788)
T ss_pred ccceEecCCCccCCCCC
Confidence 45566666666666553
No 466
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.01 E-value=4.4e-10 Score=129.87 Aligned_cols=116 Identities=26% Similarity=0.368 Sum_probs=52.5
Q ss_pred ceEEEeeCCcCCCCCCCcCCCCcccEEeccCCcCcccCCCcccccCccEEEccCccCCCCCCcccCCCcccceEeccCcc
Q 005227 4 LLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNS 83 (707)
Q Consensus 4 L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~g~ip~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~ 83 (707)
|+.|+|++|+|+.++..+. .+|++|+|++|+|+ .||..+.. +|+.|+|++|+|+ .+|..+. ++|+.|+|++|+
T Consensus 201 L~~L~Ls~N~LtsLP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~~-~L~~L~Ls~N~L~-~LP~~l~--s~L~~L~Ls~N~ 273 (754)
T PRK15370 201 ITTLILDNNELKSLPENLQ--GNIKTLYANSNQLT-SIPATLPD-TIQEMELSINRIT-ELPERLP--SALQSLDLFHNK 273 (754)
T ss_pred CcEEEecCCCCCcCChhhc--cCCCEEECCCCccc-cCChhhhc-cccEEECcCCccC-cCChhHh--CCCCEEECcCCc
Confidence 4455555555554433322 24555555555555 45443322 4555555555555 4444432 245555555555
Q ss_pred cccCCCCcccccccCCCCccceEEccCccCCCCCCCCCCCCCceeeccCCCc
Q 005227 84 LSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSFNIPPNVTVRLRGNPF 135 (707)
Q Consensus 84 l~g~~p~~~~~l~~L~~~~l~~L~l~~N~l~~~~~~~~~~~l~~l~l~~N~~ 135 (707)
|+ .+|..+. .+|+.|+|++|+|+.+|..+. ++|..|++++|.+
T Consensus 274 L~-~LP~~l~-------~sL~~L~Ls~N~Lt~LP~~lp-~sL~~L~Ls~N~L 316 (754)
T PRK15370 274 IS-CLPENLP-------EELRYLSVYDNSIRTLPAHLP-SGITHLNVQSNSL 316 (754)
T ss_pred cC-ccccccC-------CCCcEEECCCCccccCcccch-hhHHHHHhcCCcc
Confidence 55 4444332 123355555555554443321 2334444444444
No 467
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=98.99 E-value=2.2e-08 Score=106.33 Aligned_cols=168 Identities=19% Similarity=0.252 Sum_probs=128.5
Q ss_pred ceEEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHccCCCcceeEEEEEE----eCCeEEEEEecCCC-CCHHHH
Q 005227 388 YGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCD----EEGEQMLVYEFMSN-GTLRDQ 461 (707)
Q Consensus 388 fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~----~~~~~~lV~E~~~~-gsL~~~ 461 (707)
-.+.|++... ||..|++|+++............-+++++++.|+|+|++.++|. .+..+++||+|.++ ++|.++
T Consensus 289 ~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d~ 368 (655)
T KOG3741|consen 289 SITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYDL 368 (655)
T ss_pred cceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHHH
Confidence 3578999854 89999999995544333333445688999999999999999885 33478999999875 467665
Q ss_pred Hhhc-------------CCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCC
Q 005227 462 LSAK-------------SKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 528 (707)
Q Consensus 462 l~~~-------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~ 528 (707)
-... .....++...|.++.|++.||.++|+.| +.-+-|.+++|+++.+.+++|+..|.......
T Consensus 369 ~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssG---LAck~L~~~kIlv~G~~RIriS~C~i~Dvl~~ 445 (655)
T KOG3741|consen 369 YFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSG---LACKTLDLKKILVTGKMRIRISGCGIMDVLQE 445 (655)
T ss_pred HccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcC---ceeecccHhHeEeeCcceEEEecccceeeecC
Confidence 4321 1234678899999999999999999999 89999999999999999999999998776543
Q ss_pred CCCCCccccceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCC
Q 005227 529 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQP 582 (707)
Q Consensus 529 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~p 582 (707)
+.. |-+.+ -.+-|.=.||.+++.|.||..-
T Consensus 446 d~~---------------------~~le~---~Qq~D~~~lG~ll~aLAt~~~n 475 (655)
T KOG3741|consen 446 DPT---------------------EPLES---QQQNDLRDLGLLLLALATGTEN 475 (655)
T ss_pred CCC---------------------cchhH---HhhhhHHHHHHHHHHHhhcccc
Confidence 220 11111 2356888999999999999543
No 468
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=98.99 E-value=5.3e-10 Score=129.24 Aligned_cols=119 Identities=19% Similarity=0.331 Sum_probs=84.3
Q ss_pred CCceEEEeeCCcCCCCCCCcCCCCcccEEeccCCcCcccCCCcccccCccEEEccCccCCCCCCcccCCCcccceEeccC
Q 005227 2 SKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIAN 81 (707)
Q Consensus 2 ~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~g~ip~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~ 81 (707)
.+|+.|+|++|+|+.++..+. ++|+.|+|++|+|+ .+|..+.. +|+.|+|++|+|+ .+|..+. ++|+.|+|++
T Consensus 241 ~~L~~L~Ls~N~L~~LP~~l~--s~L~~L~Ls~N~L~-~LP~~l~~-sL~~L~Ls~N~Lt-~LP~~lp--~sL~~L~Ls~ 313 (754)
T PRK15370 241 DTIQEMELSINRITELPERLP--SALQSLDLFHNKIS-CLPENLPE-ELRYLSVYDNSIR-TLPAHLP--SGITHLNVQS 313 (754)
T ss_pred ccccEEECcCCccCcCChhHh--CCCCEEECcCCccC-ccccccCC-CCcEEECCCCccc-cCcccch--hhHHHHHhcC
Confidence 368889999999986655554 57899999999999 78876654 8899999999988 5676553 4677888888
Q ss_pred cccccCCCCcccccccCCCCccceEEccCccCCCCCCCCCCCCCceeeccCCCcc
Q 005227 82 NSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSFNIPPNVTVRLRGNPFC 136 (707)
Q Consensus 82 N~l~g~~p~~~~~l~~L~~~~l~~L~l~~N~l~~~~~~~~~~~l~~l~l~~N~~~ 136 (707)
|+|+ .+|..+. ++|+.|++++|.|+.+|..+. ++|+.|++++|.+.
T Consensus 314 N~Lt-~LP~~l~-------~sL~~L~Ls~N~Lt~LP~~l~-~sL~~L~Ls~N~L~ 359 (754)
T PRK15370 314 NSLT-ALPETLP-------PGLKTLEAGENALTSLPASLP-PELQVLDVSKNQIT 359 (754)
T ss_pred Cccc-cCCcccc-------ccceeccccCCccccCChhhc-CcccEEECCCCCCC
Confidence 8887 5665442 234466666776666665432 46666666666654
No 469
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.95 E-value=1.7e-08 Score=103.09 Aligned_cols=141 Identities=14% Similarity=0.142 Sum_probs=102.5
Q ss_pred ceEeeeCceEEEEEEeCCCcEEEEEEeccCChhh-H----------HHHHHHHHHHHccCCCcc--eeEEEEEEe-----
Q 005227 381 TQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQG-E----------KEFLTEIQFLSRLHHRNL--VSLVGYCDE----- 442 (707)
Q Consensus 381 ~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~-~----------~~~~~E~~~l~~l~h~nI--v~l~~~~~~----- 442 (707)
+.+-.-....|.+..+ +|+.|.||+........ . ..+.+|...+.++...+| .+++++...
T Consensus 28 e~v~~~~~rrvvr~~~-~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~ 106 (268)
T PRK15123 28 EVFRELEGRRTLRFEL-AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPA 106 (268)
T ss_pred cEEecCCCceEEEEEE-CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCc
Confidence 4444444445667666 67889999775433211 1 147889999888853333 344555533
Q ss_pred CCeEEEEEecCCCC-CHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcC-------CCc
Q 005227 443 EGEQMLVYEFMSNG-TLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDH-------KFT 514 (707)
Q Consensus 443 ~~~~~lV~E~~~~g-sL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~-------~~~ 514 (707)
....++|||++++. +|.+++......+.+...+..++.+++..+.-||..+ |+|+|++++|||++. +..
T Consensus 107 ~~~s~LVte~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~G---i~HgDL~~~NiLl~~~~~~~~~~~~ 183 (268)
T PRK15123 107 TRTSFIITEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAAG---INHRDCYICHFLLHLPFPGREEDLK 183 (268)
T ss_pred cceeEEEEeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCc---CccCCCChhhEEEeccccCCCCCce
Confidence 23578999999876 7999986433344566778899999999999999999 999999999999975 468
Q ss_pred EEEeeeccccc
Q 005227 515 AKVADFGLSRL 525 (707)
Q Consensus 515 ~kl~DFGla~~ 525 (707)
+.++||+.++.
T Consensus 184 ~~LIDl~r~~~ 194 (268)
T PRK15123 184 LSVIDLHRAQI 194 (268)
T ss_pred EEEEECCcccc
Confidence 99999998753
No 470
>PLN03150 hypothetical protein; Provisional
Probab=98.91 E-value=1.2e-09 Score=125.47 Aligned_cols=89 Identities=36% Similarity=0.645 Sum_probs=42.2
Q ss_pred ceEEEeeCCcCCCCCC-CcCCCCcccEEeccCCcCcccCCCccccc-CccEEEccCccCCCCCCcccCCCcccceEeccC
Q 005227 4 LLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQLNGSIPPGRLSL-NITTIKLSNNKLTGTIPSNFSGLPRLQRLFIAN 81 (707)
Q Consensus 4 L~~L~L~~N~l~~~~~-~~~~l~~L~~L~L~~N~l~g~ip~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~ 81 (707)
++.|+|++|+|+|.+| +++.|++|+.|+|++|+|+|.+|..+..+ +|+.|+|++|+|+|.+|..+++|++|+.|+|++
T Consensus 420 v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~ 499 (623)
T PLN03150 420 IDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNG 499 (623)
T ss_pred EEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcC
Confidence 3444444444444444 34444444444444444444444444333 444444444444444444444444444444444
Q ss_pred cccccCCCCcc
Q 005227 82 NSLSGSIPSSI 92 (707)
Q Consensus 82 N~l~g~~p~~~ 92 (707)
|+|+|.+|..+
T Consensus 500 N~l~g~iP~~l 510 (623)
T PLN03150 500 NSLSGRVPAAL 510 (623)
T ss_pred CcccccCChHH
Confidence 44444444444
No 471
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.85 E-value=8.9e-11 Score=102.86 Aligned_cols=129 Identities=26% Similarity=0.332 Sum_probs=108.3
Q ss_pred ceEEEeeCCcCCCCCC---CcCCCCcccEEeccCCcCcccCCCccccc--CccEEEccCccCCCCCCcccCCCcccceEe
Q 005227 4 LLKLSLRNCSLQGPMP---DLSRIPNLGYLDLSSNQLNGSIPPGRLSL--NITTIKLSNNKLTGTIPSNFSGLPRLQRLF 78 (707)
Q Consensus 4 L~~L~L~~N~l~~~~~---~~~~l~~L~~L~L~~N~l~g~ip~~~~~~--~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 78 (707)
+..++|++++|.-+.. .+.....|+.++|++|.|. .+|+.+... .++.|+|++|+|+ .+|.++..++.|+.|+
T Consensus 29 ~h~ldLssc~lm~i~davy~l~~~~el~~i~ls~N~fk-~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~lN 106 (177)
T KOG4579|consen 29 LHFLDLSSCQLMYIADAVYMLSKGYELTKISLSDNGFK-KFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRSLN 106 (177)
T ss_pred hhhcccccchhhHHHHHHHHHhCCceEEEEecccchhh-hCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhhcc
Confidence 5678999999886554 4777888999999999999 999877665 7999999999999 8999999999999999
Q ss_pred ccCcccccCCCCcccccccCCCCccceEEccCccCCCCCCCCCCCCC-ceeeccCCCccccCC
Q 005227 79 IANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSFNIPPN-VTVRLRGNPFCLNTN 140 (707)
Q Consensus 79 ls~N~l~g~~p~~~~~l~~L~~~~l~~L~l~~N~l~~~~~~~~~~~l-~~l~l~~N~~~~~~~ 140 (707)
++.|.|. ..|..+..+.+|. .||..+|.+..++-.+-.+.+ ....+.+|||...|.
T Consensus 107 l~~N~l~-~~p~vi~~L~~l~-----~Lds~~na~~eid~dl~~s~~~al~~lgnepl~~~~~ 163 (177)
T KOG4579|consen 107 LRFNPLN-AEPRVIAPLIKLD-----MLDSPENARAEIDVDLFYSSLPALIKLGNEPLGDETK 163 (177)
T ss_pred cccCccc-cchHHHHHHHhHH-----HhcCCCCccccCcHHHhccccHHHHHhcCCcccccCc
Confidence 9999999 8899998877776 899999999998876533333 345778899976654
No 472
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.83 E-value=2.2e-08 Score=96.45 Aligned_cols=125 Identities=26% Similarity=0.316 Sum_probs=81.8
Q ss_pred EEEEEEeCCCcEEEEEEeccCC-------------hh-------------hHHHHHHHHHHHHccCCC--cceeEEEEEE
Q 005227 390 KVYKGILPDGTVVAVKRAQEGS-------------LQ-------------GEKEFLTEIQFLSRLHHR--NLVSLVGYCD 441 (707)
Q Consensus 390 ~Vy~~~~~~~~~vavK~l~~~~-------------~~-------------~~~~~~~E~~~l~~l~h~--nIv~l~~~~~ 441 (707)
.||.|...+|..+|||+..... .. ......+|++.|.++..- ++.+++++.
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~- 79 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN- 79 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE-
T ss_pred CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe-
Confidence 4899999999999999765311 00 123467899999999765 455666443
Q ss_pred eCCeEEEEEecCC--CCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHH-HHhCCCCCeEecCCCCCCEEEcCCCcEEEe
Q 005227 442 EEGEQMLVYEFMS--NGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILY-LHTEADPPVFHRDIKASNILLDHKFTAKVA 518 (707)
Q Consensus 442 ~~~~~~lV~E~~~--~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~y-LH~~~~~~ivH~Dlkp~NILl~~~~~~kl~ 518 (707)
..++||||++ |..+..+.... ++......++.+++..+.. +|..+ |+|+|+.+.||+++++ .+.|+
T Consensus 80 ---~~~ivME~I~~~G~~~~~l~~~~----~~~~~~~~~~~~il~~~~~~~~~~g---ivHGDLs~~NIlv~~~-~~~iI 148 (188)
T PF01163_consen 80 ---RNVIVMEYIGEDGVPLPRLKDVD----LSPEEPKELLEEILEEIIKMLHKAG---IVHGDLSEYNILVDDG-KVYII 148 (188)
T ss_dssp ---TTEEEEE--EETTEEGGCHHHCG----GGGSTHHHHHHHHHHHHHHHHHCTT---EEESS-STTSEEEETT-CEEE-
T ss_pred ---CCEEEEEecCCCccchhhHHhcc----ccchhHHHHHHHHHHHHHHHHHhcC---ceecCCChhhEEeecc-eEEEE
Confidence 3579999998 54554433221 1123345667777775555 57888 9999999999999988 99999
Q ss_pred eecccccC
Q 005227 519 DFGLSRLA 526 (707)
Q Consensus 519 DFGla~~~ 526 (707)
|||.+...
T Consensus 149 Df~qav~~ 156 (188)
T PF01163_consen 149 DFGQAVDS 156 (188)
T ss_dssp -GTTEEET
T ss_pred ecCcceec
Confidence 99988654
No 473
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.74 E-value=6.8e-09 Score=80.82 Aligned_cols=58 Identities=52% Similarity=0.751 Sum_probs=30.0
Q ss_pred cccEEeccCCcCcccCCCccccc--CccEEEccCccCCCCCCcccCCCcccceEeccCccc
Q 005227 26 NLGYLDLSSNQLNGSIPPGRLSL--NITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSL 84 (707)
Q Consensus 26 ~L~~L~L~~N~l~g~ip~~~~~~--~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l 84 (707)
+|++|+|++|+|+ .||.+.+.. +|++|+|++|+|+...|..|.++++|++|++++|+|
T Consensus 2 ~L~~L~l~~n~l~-~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 2 NLESLDLSNNKLT-EIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TESEEEETSSTES-EECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred cCcEEECCCCCCC-ccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 4455555555555 555444332 455555555555544444555555555555555543
No 474
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=98.74 E-value=5.5e-10 Score=125.10 Aligned_cols=132 Identities=28% Similarity=0.322 Sum_probs=80.5
Q ss_pred CceEEEeeCCcCCCCCCCcCCCCcccEEeccCCcCcccCCCcccc--------------------------c-CccEEEc
Q 005227 3 KLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLS--------------------------L-NITTIKL 55 (707)
Q Consensus 3 ~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~g~ip~~~~~--------------------------~-~L~~L~L 55 (707)
+|+.|++.+|.++-++|.+..++.|+.|+|..|+|. .+|+.++. . .|+.|.|
T Consensus 288 ~L~~l~~~~nel~yip~~le~~~sL~tLdL~~N~L~-~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~Lyl 366 (1081)
T KOG0618|consen 288 SLVSLSAAYNELEYIPPFLEGLKSLRTLDLQSNNLP-SLPDNFLAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELYL 366 (1081)
T ss_pred hHHHHHhhhhhhhhCCCcccccceeeeeeehhcccc-ccchHHHhhhhHHHHHHhhhhccccccccccchhhHHHHHHHH
Confidence 455566666666655555555666666666666666 55542110 0 3566666
Q ss_pred cCccCCCCCCcccCCCcccceEeccCcccccCCCCcc-cccccCCCCccceEEccCccCCCCCCCC-CCCCCceeeccCC
Q 005227 56 SNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSI-WQSRTLNATETFILDFQNNNLTNISGSF-NIPPNVTVRLRGN 133 (707)
Q Consensus 56 s~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~-~~l~~L~~~~l~~L~l~~N~l~~~~~~~-~~~~l~~l~l~~N 133 (707)
.+|+|+...-..|.+.+.|+.|+|++|+|. .+|++. .++. .|++|+||+|+|+.+|..+ .++.|++|...+|
T Consensus 367 anN~Ltd~c~p~l~~~~hLKVLhLsyNrL~-~fpas~~~kle-----~LeeL~LSGNkL~~Lp~tva~~~~L~tL~ahsN 440 (1081)
T KOG0618|consen 367 ANNHLTDSCFPVLVNFKHLKVLHLSYNRLN-SFPASKLRKLE-----ELEELNLSGNKLTTLPDTVANLGRLHTLRAHSN 440 (1081)
T ss_pred hcCcccccchhhhccccceeeeeecccccc-cCCHHHHhchH-----HhHHHhcccchhhhhhHHHHhhhhhHHHhhcCC
Confidence 666666655556666777777777777776 666543 2333 3347777777777777655 6666777777777
Q ss_pred CccccCCc
Q 005227 134 PFCLNTNA 141 (707)
Q Consensus 134 ~~~~~~~~ 141 (707)
.+.+.+.+
T Consensus 441 ~l~~fPe~ 448 (1081)
T KOG0618|consen 441 QLLSFPEL 448 (1081)
T ss_pred ceeechhh
Confidence 76666543
No 475
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=98.68 E-value=8.7e-07 Score=92.03 Aligned_cols=260 Identities=15% Similarity=0.143 Sum_probs=160.2
Q ss_pred ccceEeeeCceEEEEEEeCCCcEEEEEEeccCChhhHHHHHHHHHHHHcc-CCCcceeEEEEE------EeC-CeEEEEE
Q 005227 379 SSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-HHRNLVSLVGYC------DEE-GEQMLVY 450 (707)
Q Consensus 379 ~~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~------~~~-~~~~lV~ 450 (707)
..+.||+|+.+.+|..-- -+..+.|+..........+ .+..|... .||-+-.-+.+= .+. ...-+.|
T Consensus 15 ~gr~LgqGgea~ly~l~e--~~d~VAKIYh~Pppa~~aq---k~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~iGflm 89 (637)
T COG4248 15 PGRPLGQGGEADLYTLGE--VRDQVAKIYHAPPPAAQAQ---KVAELAATPDAPLLNYRVAWPQATLHGGRRGKVIGFLM 89 (637)
T ss_pred CCccccCCccceeeecch--hhchhheeecCCCchHHHH---HHHHhccCCCCcchhhhhcccHHHhhCCCccceeEEec
Confidence 367899999999986431 1223456665433322211 22233333 566443312221 112 2356778
Q ss_pred ecCCCCC-HHHHHh----hcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeeccccc
Q 005227 451 EFMSNGT-LRDQLS----AKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRL 525 (707)
Q Consensus 451 E~~~~gs-L~~~l~----~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~ 525 (707)
..+.+.. ...+.. +++-...+|+..+..++.+|.+.+-||..| .+-+|+.++|+||++++.+.+.|=..-..
T Consensus 90 P~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~G---h~vGDVn~~~~lVsd~~~V~LVdsDsfqi 166 (637)
T COG4248 90 PKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEHG---HVVGDVNQNSFLVSDDSKVVLVDSDSFQI 166 (637)
T ss_pred ccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhcC---CcccccCccceeeecCceEEEEcccceee
Confidence 8776643 222222 123345789999999999999999999999 88999999999999999999987543322
Q ss_pred CCCCCCCCccccceecccccCCCccchhhhc-----cCCCCCchhhHHHHHHHHHHHcC-CCCCCCCch---hHHHHHHH
Q 005227 526 APVPDIEGIVPAHVSTVVKGTPGYLDPEYFL-----THKLTDKSDVYSLGVVFLELLTG-MQPISHGKN---IVREVNIA 596 (707)
Q Consensus 526 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~s~~sDVwSlGvll~elltG-~~pf~~~~~---~~~~~~~~ 596 (707)
.. ........+|...|.+||... +..-+...|-|.+|+++++++.| +.||..... .....+..
T Consensus 167 ~~--------ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~ 238 (637)
T COG4248 167 NA--------NGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETD 238 (637)
T ss_pred cc--------CCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhh
Confidence 11 123344567889999999875 34456679999999999999996 999964211 00000100
Q ss_pred hhcccchhhccCCC--CC----CC-hHHHHHHHHHHHHhcccC--CCCCCCHHHHHHHHHHhhhcCC
Q 005227 597 YQSSMMFSVIDGNM--GS----YP-SECVEKFIKLALKCCQDE--TDARPSMSEVMRELESIWNMMP 654 (707)
Q Consensus 597 ~~~~~~~~~~~~~~--~~----~~-~~~~~~l~~l~~~c~~~~--p~~RPt~~~v~~~L~~~~~~~~ 654 (707)
.....+...-+... .+ .| .-.+..+..+..+|+... +.-||+.+..+..|..+...+.
T Consensus 239 Ia~g~f~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~al~~~L~ 305 (637)
T COG4248 239 IAHGRFAYASDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKAWVAALDALRQQLK 305 (637)
T ss_pred hhcceeeechhccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHHHHhhh
Confidence 11111111111111 11 11 233466778888888754 5689999999998888776554
No 476
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.67 E-value=1.3e-08 Score=79.17 Aligned_cols=58 Identities=47% Similarity=0.647 Sum_probs=52.8
Q ss_pred CCceEEEeeCCcCCCCCC-CcCCCCcccEEeccCCcCcccCCCccccc--CccEEEccCccC
Q 005227 2 SKLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQLNGSIPPGRLSL--NITTIKLSNNKL 60 (707)
Q Consensus 2 ~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~L~~N~l~g~ip~~~~~~--~L~~L~Ls~N~l 60 (707)
++|++|+|++|+|+.+++ .|.++++|++|+|++|.|+ .+|++.+.. +|++|+|++|+|
T Consensus 1 p~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~-~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 1 PNLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLT-SIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TTESEEEETSSTESEECTTTTTTGTTESEEEETSSSES-EEETTTTTTSTTESEEEETSSSB
T ss_pred CcCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccC-ccCHHHHcCCCCCCEEeCcCCcC
Confidence 589999999999999987 6999999999999999999 888876653 899999999986
No 477
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.67 E-value=3.5e-10 Score=123.18 Aligned_cols=128 Identities=27% Similarity=0.379 Sum_probs=94.7
Q ss_pred CceEEEeeCCcCCCCCCCcCCCCcccEEeccCCcCcccCCCccccc-CccEEEccCccCCCCCCc-ccCCCcccceEecc
Q 005227 3 KLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSL-NITTIKLSNNKLTGTIPS-NFSGLPRLQRLFIA 80 (707)
Q Consensus 3 ~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~g~ip~~~~~~-~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~ls 80 (707)
.|...+.++|.|...-.++.-++.|+.|+|++|+++ ... .+-.+ .|++|||++|+|+ .+|. ...++. |+.|.|+
T Consensus 165 ~L~~a~fsyN~L~~mD~SLqll~ale~LnLshNk~~-~v~-~Lr~l~~LkhLDlsyN~L~-~vp~l~~~gc~-L~~L~lr 240 (1096)
T KOG1859|consen 165 KLATASFSYNRLVLMDESLQLLPALESLNLSHNKFT-KVD-NLRRLPKLKHLDLSYNCLR-HVPQLSMVGCK-LQLLNLR 240 (1096)
T ss_pred hHhhhhcchhhHHhHHHHHHHHHHhhhhccchhhhh-hhH-HHHhcccccccccccchhc-cccccchhhhh-heeeeec
Confidence 466778888888866667888889999999999998 655 23333 8999999999999 5553 334444 9999999
Q ss_pred CcccccCCCCcccccccCCCCccceEEccCccCCCCCCC---CCCCCCceeeccCCCccccCCc
Q 005227 81 NNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGS---FNIPPNVTVRLRGNPFCLNTNA 141 (707)
Q Consensus 81 ~N~l~g~~p~~~~~l~~L~~~~l~~L~l~~N~l~~~~~~---~~~~~l~~l~l~~N~~~~~~~~ 141 (707)
+|.++ .+- .+.++. +|..|||++|-|++.... +.+..|..|+|.|||++|..--
T Consensus 241 nN~l~-tL~-gie~Lk-----sL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~c~p~h 297 (1096)
T KOG1859|consen 241 NNALT-TLR-GIENLK-----SLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLCCAPWH 297 (1096)
T ss_pred ccHHH-hhh-hHHhhh-----hhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccccCHHH
Confidence 99988 322 244444 444899999988876443 2667788999999999988654
No 478
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.64 E-value=8.8e-09 Score=113.20 Aligned_cols=184 Identities=19% Similarity=0.303 Sum_probs=119.6
Q ss_pred HHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCCCc--cccceecccccCCCccchhhhcc
Q 005227 480 LGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGI--VPAHVSTVVKGTPGYLDPEYFLT 557 (707)
Q Consensus 480 ~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~--~~~~~~~~~~gt~~y~aPE~~~~ 557 (707)
.+++.||.|+|... .+||++|.|++|.++..+..||+.|+.+........... ..........-...|.|||++.+
T Consensus 106 ~~v~dgl~flh~sA--k~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~ 183 (700)
T KOG2137|consen 106 GNVADGLAFLHRSA--KVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLG 183 (700)
T ss_pred hcccchhhhhccCc--ceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhcc
Confidence 34458999999854 599999999999999999999999998765443111000 00111112223457999999999
Q ss_pred CCCCCchhhHHHHHHHHHHHc-CCCCCCCCchhHHHHHHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCC
Q 005227 558 HKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDAR 636 (707)
Q Consensus 558 ~~~s~~sDVwSlGvll~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~R 636 (707)
...+.++|+||+||++|.+.. |+.-+.........-... ...+-..-.+..+.+.++.+-+.+.+..++.-|
T Consensus 184 ~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~~~~-------~~~~~~~~~~s~~~p~el~~~l~k~l~~~~~~r 256 (700)
T KOG2137|consen 184 TTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYSFSR-------NLLNAGAFGYSNNLPSELRESLKKLLNGDSAVR 256 (700)
T ss_pred ccccccccceeeeeEEEEEecCCcchhhccCCcchhhhhh-------cccccccccccccCcHHHHHHHHHHhcCCcccC
Confidence 888999999999999999995 544443322211111000 001111112345667778888888899999999
Q ss_pred CCHHHHHHHHHHhhhcCCCCCCCCCccccCCCCCCCCCCCC
Q 005227 637 PSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPS 677 (707)
Q Consensus 637 Pt~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~s 677 (707)
|++..+... ..+.+....++.|+..+.+.||.+--.
T Consensus 257 p~~~~l~~~-----~ff~D~~~~aLrfLD~l~~kdn~qKs~ 292 (700)
T KOG2137|consen 257 PTLDLLLSI-----PFFSDPGLKALRFLDDLPQKDNSQKSS 292 (700)
T ss_pred cchhhhhcc-----cccCCchhhhhhhcccccccCcHHHHH
Confidence 977655432 223334445567888888888766543
No 479
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.64 E-value=1.9e-07 Score=92.47 Aligned_cols=136 Identities=22% Similarity=0.202 Sum_probs=97.6
Q ss_pred CCccceEeeeCceEEEEEEeCCCcEEEEEEeccCCh----------------------hhHHHHHHHHHHHHccCCC--c
Q 005227 377 FNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSL----------------------QGEKEFLTEIQFLSRLHHR--N 432 (707)
Q Consensus 377 ~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~----------------------~~~~~~~~E~~~l~~l~h~--n 432 (707)
..+.++||-|.-+.||.|..++|..+|||.=..... .......+|.++|.++... .
T Consensus 93 e~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~ 172 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVK 172 (304)
T ss_pred HhhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCC
Confidence 456789999999999999999999999995321110 1123467899999998654 5
Q ss_pred ceeEEEEEEeCCeEEEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCC
Q 005227 433 LVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHK 512 (707)
Q Consensus 433 Iv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~ 512 (707)
+.+.+++ +..++||||++|-.|...- ++......++..|++-+.-+-..| |||+|+.+-||+++++
T Consensus 173 VP~P~~~----nRHaVvMe~ieG~eL~~~r-------~~~en~~~il~~il~~~~~~~~~G---iVHGDlSefNIlV~~d 238 (304)
T COG0478 173 VPKPIAW----NRHAVVMEYIEGVELYRLR-------LDVENPDEILDKILEEVRKAYRRG---IVHGDLSEFNILVTED 238 (304)
T ss_pred CCCcccc----ccceeeeehcccceeeccc-------CcccCHHHHHHHHHHHHHHHHHcC---ccccCCchheEEEecC
Confidence 6665543 4568999999886554321 122333444555555555555677 9999999999999999
Q ss_pred CcEEEeeecccccC
Q 005227 513 FTAKVADFGLSRLA 526 (707)
Q Consensus 513 ~~~kl~DFGla~~~ 526 (707)
|.+.++||--+...
T Consensus 239 g~~~vIDwPQ~v~~ 252 (304)
T COG0478 239 GDIVVIDWPQAVPI 252 (304)
T ss_pred CCEEEEeCcccccC
Confidence 99999999766543
No 480
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=98.62 E-value=4.9e-09 Score=103.43 Aligned_cols=106 Identities=24% Similarity=0.285 Sum_probs=87.7
Q ss_pred CCCCcccEEeccCCcCcccCCCccccc-CccEEEccCccCCCCCCcccCCCcccceEeccCcccccCCCCcccccccCCC
Q 005227 22 SRIPNLGYLDLSSNQLNGSIPPGRLSL-NITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNA 100 (707)
Q Consensus 22 ~~l~~L~~L~L~~N~l~g~ip~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~ 100 (707)
..+..|++||||+|.|+ .|..+.-.. .++.|+||+|.|. .+-. +..|++|+.||||+|.++ .+-.+-.. +
T Consensus 281 dTWq~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~-~v~n-La~L~~L~~LDLS~N~Ls-~~~Gwh~K-----L 351 (490)
T KOG1259|consen 281 DTWQELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIR-TVQN-LAELPQLQLLDLSGNLLA-ECVGWHLK-----L 351 (490)
T ss_pred chHhhhhhccccccchh-hhhhhhhhccceeEEecccccee-eehh-hhhcccceEeecccchhH-hhhhhHhh-----h
Confidence 34567999999999999 998876654 8999999999999 5554 889999999999999998 55544333 3
Q ss_pred CccceEEccCccCCCCCCCCCCCCCceeeccCCCcc
Q 005227 101 TETFILDFQNNNLTNISGSFNIPPNVTVRLRGNPFC 136 (707)
Q Consensus 101 ~~l~~L~l~~N~l~~~~~~~~~~~l~~l~l~~N~~~ 136 (707)
-+++.|.|+.|.|..+++.-.+-+|..|++++|++-
T Consensus 352 GNIKtL~La~N~iE~LSGL~KLYSLvnLDl~~N~Ie 387 (490)
T KOG1259|consen 352 GNIKTLKLAQNKIETLSGLRKLYSLVNLDLSSNQIE 387 (490)
T ss_pred cCEeeeehhhhhHhhhhhhHhhhhheeccccccchh
Confidence 345589999999999877667888999999999974
No 481
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=98.62 E-value=1.8e-08 Score=110.30 Aligned_cols=131 Identities=30% Similarity=0.430 Sum_probs=84.5
Q ss_pred CceEEEeeCCcCCCCCCCcCCCCcccEEeccCCcCcccCCCccccc-CccEEEccCccCCCCCCcccCCCcccceEeccC
Q 005227 3 KLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSL-NITTIKLSNNKLTGTIPSNFSGLPRLQRLFIAN 81 (707)
Q Consensus 3 ~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~g~ip~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~ 81 (707)
+|+.|++++|++..++..+..+++|+.|++++|+++ .+|...... +|+.|++++|+++ .+|.....+..|++|.+++
T Consensus 141 nL~~L~l~~N~i~~l~~~~~~l~~L~~L~l~~N~l~-~l~~~~~~~~~L~~L~ls~N~i~-~l~~~~~~~~~L~~l~~~~ 218 (394)
T COG4886 141 NLKELDLSDNKIESLPSPLRNLPNLKNLDLSFNDLS-DLPKLLSNLSNLNNLDLSGNKIS-DLPPEIELLSALEELDLSN 218 (394)
T ss_pred hcccccccccchhhhhhhhhccccccccccCCchhh-hhhhhhhhhhhhhheeccCCccc-cCchhhhhhhhhhhhhhcC
Confidence 688888888888876666788888888888888888 888765333 7888888888888 6777665556677777777
Q ss_pred cccccCCCCcccccccCC------------------CCccceEEccCccCCCCCCCCCCCCCceeeccCCCcc
Q 005227 82 NSLSGSIPSSIWQSRTLN------------------ATETFILDFQNNNLTNISGSFNIPPNVTVRLRGNPFC 136 (707)
Q Consensus 82 N~l~g~~p~~~~~l~~L~------------------~~~l~~L~l~~N~l~~~~~~~~~~~l~~l~l~~N~~~ 136 (707)
|++. .++..+..+.++. +++++.|++++|.++.++....+.+++.|++++|.+.
T Consensus 219 N~~~-~~~~~~~~~~~l~~l~l~~n~~~~~~~~~~~l~~l~~L~~s~n~i~~i~~~~~~~~l~~L~~s~n~~~ 290 (394)
T COG4886 219 NSII-ELLSSLSNLKNLSGLELSNNKLEDLPESIGNLSNLETLDLSNNQISSISSLGSLTNLRELDLSGNSLS 290 (394)
T ss_pred Ccce-ecchhhhhcccccccccCCceeeeccchhccccccceeccccccccccccccccCccCEEeccCcccc
Confidence 7544 4444444443332 1123355555555555554334555555555555543
No 482
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=98.61 E-value=1.4e-07 Score=116.32 Aligned_cols=124 Identities=27% Similarity=0.299 Sum_probs=88.3
Q ss_pred CceEEEeeCCcCCCCCCCcCCCCcccEEeccCCcCcccCCCccccc-CccEEEccCccCCCCCCcccCCCcccceEeccC
Q 005227 3 KLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSL-NITTIKLSNNKLTGTIPSNFSGLPRLQRLFIAN 81 (707)
Q Consensus 3 ~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~g~ip~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~ 81 (707)
+|+.|++.+|.++.+|..| .+.+|+.|+|++|+|. .+|.+...+ +|+.|+|++|+..+.+|. ++.+++|+.|+|++
T Consensus 590 ~Lr~L~~~~~~l~~lP~~f-~~~~L~~L~L~~s~l~-~L~~~~~~l~~Lk~L~Ls~~~~l~~ip~-ls~l~~Le~L~L~~ 666 (1153)
T PLN03210 590 KLRLLRWDKYPLRCMPSNF-RPENLVKLQMQGSKLE-KLWDGVHSLTGLRNIDLRGSKNLKEIPD-LSMATNLETLKLSD 666 (1153)
T ss_pred ccEEEEecCCCCCCCCCcC-CccCCcEEECcCcccc-ccccccccCCCCCEEECCCCCCcCcCCc-cccCCcccEEEecC
Confidence 4677777777776665555 4677888888888887 777766555 788888877654446664 77778888888887
Q ss_pred cccccCCCCcccccccCCCCccceEEccC-ccCCCCCCCCCCCCCceeeccCCC
Q 005227 82 NSLSGSIPSSIWQSRTLNATETFILDFQN-NNLTNISGSFNIPPNVTVRLRGNP 134 (707)
Q Consensus 82 N~l~g~~p~~~~~l~~L~~~~l~~L~l~~-N~l~~~~~~~~~~~l~~l~l~~N~ 134 (707)
|.....+|.++.++++|+ .|++++ +.++.+|....+++|+.|++++|.
T Consensus 667 c~~L~~lp~si~~L~~L~-----~L~L~~c~~L~~Lp~~i~l~sL~~L~Lsgc~ 715 (1153)
T PLN03210 667 CSSLVELPSSIQYLNKLE-----DLDMSRCENLEILPTGINLKSLYRLNLSGCS 715 (1153)
T ss_pred CCCccccchhhhccCCCC-----EEeCCCCCCcCccCCcCCCCCCCEEeCCCCC
Confidence 765557787777766655 788876 467777766677777777777764
No 483
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=98.58 E-value=1.7e-08 Score=110.53 Aligned_cols=128 Identities=30% Similarity=0.409 Sum_probs=106.2
Q ss_pred CCceEEEeeCCcCCCCCCCcCCCC-cccEEeccCCcCcccCCCccccc-CccEEEccCccCCCCCCcccCCCcccceEec
Q 005227 2 SKLLKLSLRNCSLQGPMPDLSRIP-NLGYLDLSSNQLNGSIPPGRLSL-NITTIKLSNNKLTGTIPSNFSGLPRLQRLFI 79 (707)
Q Consensus 2 ~~L~~L~L~~N~l~~~~~~~~~l~-~L~~L~L~~N~l~g~ip~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 79 (707)
+.++.|++.+|.++.+++....+. +|+.|++++|++. .+|..+..+ +|+.|++++|+++ .+|...+.+++|+.|++
T Consensus 116 ~~l~~L~l~~n~i~~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N~l~-~l~~~~~~~~~L~~L~l 193 (394)
T COG4886 116 TNLTSLDLDNNNITDIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFNDLS-DLPKLLSNLSNLNNLDL 193 (394)
T ss_pred cceeEEecCCcccccCccccccchhhcccccccccchh-hhhhhhhccccccccccCCchhh-hhhhhhhhhhhhhheec
Confidence 468999999999999999888885 9999999999999 998666665 9999999999999 88887778999999999
Q ss_pred cCcccccCCCCcccccccCCCCccceEEccCccCCCCCCCC-CCCCCceeeccCCCccc
Q 005227 80 ANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSF-NIPPNVTVRLRGNPFCL 137 (707)
Q Consensus 80 s~N~l~g~~p~~~~~l~~L~~~~l~~L~l~~N~l~~~~~~~-~~~~l~~l~l~~N~~~~ 137 (707)
++|+++ .+|..+..+..| +.|++++|++...+..+ .+.++..+.+.+|++.+
T Consensus 194 s~N~i~-~l~~~~~~~~~L-----~~l~~~~N~~~~~~~~~~~~~~l~~l~l~~n~~~~ 246 (394)
T COG4886 194 SGNKIS-DLPPEIELLSAL-----EELDLSNNSIIELLSSLSNLKNLSGLELSNNKLED 246 (394)
T ss_pred cCCccc-cCchhhhhhhhh-----hhhhhcCCcceecchhhhhcccccccccCCceeee
Confidence 999999 889875444334 48999999655554444 67777777788888755
No 484
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.56 E-value=7.2e-07 Score=88.14 Aligned_cols=124 Identities=24% Similarity=0.237 Sum_probs=91.7
Q ss_pred CCcEEEEEEeccCCh-------hhHHHHHHHHHHHHccCCC--cceeEEEEEEeC----CeEEEEEecCCCC-CHHHHHh
Q 005227 398 DGTVVAVKRAQEGSL-------QGEKEFLTEIQFLSRLHHR--NLVSLVGYCDEE----GEQMLVYEFMSNG-TLRDQLS 463 (707)
Q Consensus 398 ~~~~vavK~l~~~~~-------~~~~~~~~E~~~l~~l~h~--nIv~l~~~~~~~----~~~~lV~E~~~~g-sL~~~l~ 463 (707)
.++.+.+|.....-. .....+.+|...+..+... ...+.+++.... ...++|+|++++. +|.+++.
T Consensus 31 ~~~~y~~k~~~~~~~~~~~~~~~~~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~ 110 (206)
T PF06293_consen 31 VGRRYYRKRLWNKLRRDRLRFPLRRSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQ 110 (206)
T ss_pred cceEEEECCeechhccchhhhcccchHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHH
Confidence 355666665432111 2234678888888887533 345566665543 2458999999874 7999986
Q ss_pred hcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCC---cEEEeeecccccC
Q 005227 464 AKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKF---TAKVADFGLSRLA 526 (707)
Q Consensus 464 ~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~---~~kl~DFGla~~~ 526 (707)
.... .+......++.++++.++-||..+ |+|+|+++.|||++.+. .+.++||+-++..
T Consensus 111 ~~~~--~~~~~~~~ll~~l~~~i~~lH~~g---i~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~ 171 (206)
T PF06293_consen 111 QWEQ--LDPSQRRELLRALARLIAKLHDAG---IYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFR 171 (206)
T ss_pred hhcc--cchhhHHHHHHHHHHHHHHHHHCc---CCCCCCCcccEEEeCCCCceeEEEEcchhceeC
Confidence 5333 566678899999999999999999 99999999999999887 8999999987653
No 485
>PRK09902 hypothetical protein; Provisional
Probab=98.56 E-value=9.4e-07 Score=85.73 Aligned_cols=138 Identities=19% Similarity=0.182 Sum_probs=105.0
Q ss_pred EeeeCceEEEEEEeCCCcEEEEEEeccC---C---hhhHHHHHHHHHHHHccCCCc--ceeEEEEEE-e----CCeEEEE
Q 005227 383 IGQGGYGKVYKGILPDGTVVAVKRAQEG---S---LQGEKEFLTEIQFLSRLHHRN--LVSLVGYCD-E----EGEQMLV 449 (707)
Q Consensus 383 lG~G~fg~Vy~~~~~~~~~vavK~l~~~---~---~~~~~~~~~E~~~l~~l~h~n--Iv~l~~~~~-~----~~~~~lV 449 (707)
-|+||.+.|+.-.+. |+.+-+|+-... + ...+..|.+|+..++++...+ +.+.+ ++. . ...-+||
T Consensus 26 ~~rgG~SgV~r~~~~-g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~rA~LV 103 (216)
T PRK09902 26 YRRNGMSGVQCVERN-GKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWRALLV 103 (216)
T ss_pred cCCCCcceEEEEEeC-CcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceEEEEE
Confidence 477899999998774 447888876521 1 235678999999999985322 44444 332 1 1246899
Q ss_pred EecCCC-CCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCc--EEEeeeccccc
Q 005227 450 YEFMSN-GTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFT--AKVADFGLSRL 525 (707)
Q Consensus 450 ~E~~~~-gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~--~kl~DFGla~~ 525 (707)
+|-+++ .+|.+++.+....+.+...+..+..++++.++-||..+ +.|+|+.+.||+++.++. ++++||.-++.
T Consensus 104 Te~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~G---v~Hgdly~khIll~~~g~~~v~lIDlEk~r~ 179 (216)
T PRK09902 104 TEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSVN---RQHGCCYVRHIYVKTEGKAEAGFLDLEKSRR 179 (216)
T ss_pred EEeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHCC---CcCCCCCHhheeecCCCCeeEEEEEhhccch
Confidence 997743 58999987655556788888999999999999999999 999999999999986666 99999986653
No 486
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=98.54 E-value=1.6e-08 Score=107.93 Aligned_cols=108 Identities=26% Similarity=0.416 Sum_probs=79.1
Q ss_pred ceEEEeeCCcCCCCCCCcCCCCcccEEeccCCcCcccCCCccccc-CccEEEccCccCCCCCCcccCCCcccceEeccCc
Q 005227 4 LLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSL-NITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANN 82 (707)
Q Consensus 4 L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~g~ip~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N 82 (707)
|+.|-+++|+++.++++++.+..|..||.+.|.+. ++|..+..+ +|+.|++..|++. .+|.++.. -.|..||+|.|
T Consensus 145 Lkvli~sNNkl~~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~-~lp~El~~-LpLi~lDfScN 221 (722)
T KOG0532|consen 145 LKVLIVSNNKLTSLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE-DLPEELCS-LPLIRLDFSCN 221 (722)
T ss_pred ceeEEEecCccccCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhh-hCCHHHhC-CceeeeecccC
Confidence 55666666666655556666666666666666666 666665555 6666777777777 56666663 36889999999
Q ss_pred ccccCCCCcccccccCCCCccceEEccCccCCCCCCCC
Q 005227 83 SLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSF 120 (707)
Q Consensus 83 ~l~g~~p~~~~~l~~L~~~~l~~L~l~~N~l~~~~~~~ 120 (707)
+++ .||..|..|+.|+ +|-|.+|.|+.-|..+
T Consensus 222 kis-~iPv~fr~m~~Lq-----~l~LenNPLqSPPAqI 253 (722)
T KOG0532|consen 222 KIS-YLPVDFRKMRHLQ-----VLQLENNPLQSPPAQI 253 (722)
T ss_pred cee-ecchhhhhhhhhe-----eeeeccCCCCCChHHH
Confidence 999 9999999888776 9999999999877654
No 487
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=98.53 E-value=2.2e-07 Score=114.69 Aligned_cols=99 Identities=18% Similarity=0.222 Sum_probs=43.0
Q ss_pred CcccEEeccCCcCcccCCCccccc-CccEEEccCccCCCCCCcccCCCcccceEeccCcccccCCCCcccccccCCCCcc
Q 005227 25 PNLGYLDLSSNQLNGSIPPGRLSL-NITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATET 103 (707)
Q Consensus 25 ~~L~~L~L~~N~l~g~ip~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~~~l 103 (707)
++|+.|+|++|...+.+|..+..+ +|+.|+|++|..-+.+|..+ ++++|+.|+|++|.....+|... .+|
T Consensus 778 ~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~-~L~sL~~L~Ls~c~~L~~~p~~~--------~nL 848 (1153)
T PLN03210 778 PSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI-NLESLESLDLSGCSRLRTFPDIS--------TNI 848 (1153)
T ss_pred ccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCC-CccccCEEECCCCCccccccccc--------ccc
Confidence 345555555544443444444433 45555554433222444433 44445555555443322333211 122
Q ss_pred ceEEccCccCCCCCCCC-CCCCCceeeccC
Q 005227 104 FILDFQNNNLTNISGSF-NIPPNVTVRLRG 132 (707)
Q Consensus 104 ~~L~l~~N~l~~~~~~~-~~~~l~~l~l~~ 132 (707)
+.|+|++|.|+.+|..+ .+++|..|++.+
T Consensus 849 ~~L~Ls~n~i~~iP~si~~l~~L~~L~L~~ 878 (1153)
T PLN03210 849 SDLNLSRTGIEEVPWWIEKFSNLSFLDMNG 878 (1153)
T ss_pred CEeECCCCCCccChHHHhcCCCCCEEECCC
Confidence 34455555555444443 444444444444
No 488
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=98.50 E-value=1.5e-08 Score=107.41 Aligned_cols=129 Identities=22% Similarity=0.286 Sum_probs=74.9
Q ss_pred CceEEEeeCCcCCCCC----C-CcCCC-CcccEEeccCCcCcccCCCc----cccc-CccEEEccCccCCCC----CCcc
Q 005227 3 KLLKLSLRNCSLQGPM----P-DLSRI-PNLGYLDLSSNQLNGSIPPG----RLSL-NITTIKLSNNKLTGT----IPSN 67 (707)
Q Consensus 3 ~L~~L~L~~N~l~~~~----~-~~~~l-~~L~~L~L~~N~l~g~ip~~----~~~~-~L~~L~Ls~N~l~~~----~p~~ 67 (707)
+|+.|+|++|++++.. . .+..+ ++|+.|+|++|.+++..... +... +|+.|+|++|.+++. ++..
T Consensus 109 ~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~ 188 (319)
T cd00116 109 SLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAKALRANRDLKELNLANNGIGDAGIRALAEG 188 (319)
T ss_pred cccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHHHHHhCCCcCEEECcCCCCchHHHHHHHHH
Confidence 4778888888777321 1 24455 77788888888777432221 1112 677777777777732 3334
Q ss_pred cCCCcccceEeccCcccccCCC----CcccccccCCCCccceEEccCccCCCCCC-----CC--CCCCCceeeccCCCcc
Q 005227 68 FSGLPRLQRLFIANNSLSGSIP----SSIWQSRTLNATETFILDFQNNNLTNISG-----SF--NIPPNVTVRLRGNPFC 136 (707)
Q Consensus 68 ~~~l~~L~~L~ls~N~l~g~~p----~~~~~l~~L~~~~l~~L~l~~N~l~~~~~-----~~--~~~~l~~l~l~~N~~~ 136 (707)
+..+++|++|+|++|.+++.-. ..+..++ +|++|++++|.++.... .+ ..+.|+.|++++|.+.
T Consensus 189 l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~-----~L~~L~ls~n~l~~~~~~~l~~~~~~~~~~L~~L~l~~n~i~ 263 (319)
T cd00116 189 LKANCNLEVLDLNNNGLTDEGASALAETLASLK-----SLEVLNLGDNNLTDAGAAALASALLSPNISLLTLSLSCNDIT 263 (319)
T ss_pred HHhCCCCCEEeccCCccChHHHHHHHHHhcccC-----CCCEEecCCCcCchHHHHHHHHHHhccCCCceEEEccCCCCC
Confidence 4555677777777777763322 2222233 34477777777764211 11 1356777777777664
No 489
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=98.47 E-value=1.8e-08 Score=106.75 Aligned_cols=83 Identities=29% Similarity=0.287 Sum_probs=37.7
Q ss_pred CceEEEeeCCcCCCCC------C-CcCCCCcccEEeccCCcCcccCCCccccc-C---ccEEEccCccCCC----CCCcc
Q 005227 3 KLLKLSLRNCSLQGPM------P-DLSRIPNLGYLDLSSNQLNGSIPPGRLSL-N---ITTIKLSNNKLTG----TIPSN 67 (707)
Q Consensus 3 ~L~~L~L~~N~l~~~~------~-~~~~l~~L~~L~L~~N~l~g~ip~~~~~~-~---L~~L~Ls~N~l~~----~~p~~ 67 (707)
+|+.|++++|.+.+.. + .+..+++|+.|+|++|.+.+..+..+... + |+.|++++|++++ .+...
T Consensus 52 ~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~ 131 (319)
T cd00116 52 SLKELCLSLNETGRIPRGLQSLLQGLTKGCGLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKG 131 (319)
T ss_pred CceEEeccccccCCcchHHHHHHHHHHhcCceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHH
Confidence 3555555555554211 1 23445555555555555553222222211 2 5555555555542 12223
Q ss_pred cCCC-cccceEeccCcccc
Q 005227 68 FSGL-PRLQRLFIANNSLS 85 (707)
Q Consensus 68 ~~~l-~~L~~L~ls~N~l~ 85 (707)
+..+ ++|+.|+|++|.++
T Consensus 132 l~~~~~~L~~L~L~~n~l~ 150 (319)
T cd00116 132 LKDLPPALEKLVLGRNRLE 150 (319)
T ss_pred HHhCCCCceEEEcCCCcCC
Confidence 3344 45555555555555
No 490
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.44 E-value=1.1e-06 Score=97.33 Aligned_cols=140 Identities=21% Similarity=0.254 Sum_probs=94.6
Q ss_pred ceEeeeCceEEEEEEeCCCcEEEEEEeccCChh----------------------------------------hHHHHHH
Q 005227 381 TQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQ----------------------------------------GEKEFLT 420 (707)
Q Consensus 381 ~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~----------------------------------------~~~~~~~ 420 (707)
+.|+.++-|.||+|++++|+.||||+....-.. .+-++.+
T Consensus 131 ~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~~ 210 (517)
T COG0661 131 EPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYRR 210 (517)
T ss_pred CchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHHH
Confidence 789999999999999999999999986542110 0112455
Q ss_pred HHHHHHccC-----CCcceeEEEEE-EeCCeEEEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHH-HHHHHhCC
Q 005227 421 EIQFLSRLH-----HRNLVSLVGYC-DEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRG-ILYLHTEA 493 (707)
Q Consensus 421 E~~~l~~l~-----h~nIv~l~~~~-~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~g-L~yLH~~~ 493 (707)
|+..+.+++ .+++ ++=.+| +..+...|+|||++|-.+.+...-+. ...+... ++..++++ +..+-..+
T Consensus 211 EA~n~~~~~~nf~~~~~v-~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~-~g~d~k~---ia~~~~~~f~~q~~~dg 285 (517)
T COG0661 211 EAANAERFRENFKDDPDV-YVPKVYWEYTTRRVLTMEWIDGIKISDIAALKS-AGIDRKE---LAELLVRAFLRQLLRDG 285 (517)
T ss_pred HHHHHHHHHHHcCCCCCe-EeceeehhccCCcEEEEEeeCCEecccHHHHHh-cCCCHHH---HHHHHHHHHHHHHHhcC
Confidence 666665552 3333 222333 44567899999999999988743222 2344333 33333222 33333456
Q ss_pred CCCeEecCCCCCCEEEcCCCcEEEeeecccccCCC
Q 005227 494 DPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 528 (707)
Q Consensus 494 ~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~ 528 (707)
++|+|..|.||+++.++++.+.|||+......
T Consensus 286 ---ffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~~ 317 (517)
T COG0661 286 ---FFHADPHPGNILVRSDGRIVLLDFGIVGRLDP 317 (517)
T ss_pred ---ccccCCCccceEEecCCcEEEEcCcceecCCH
Confidence 99999999999999999999999999876643
No 491
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=98.36 E-value=7e-06 Score=82.20 Aligned_cols=138 Identities=16% Similarity=0.213 Sum_probs=85.3
Q ss_pred ceEeeeCceEEEEEEeCCCcEEEEEEeccCChhhHHHHHHHHHHHHccCCCc--ceeEEEEEEeCCeEEEEEecCCCCC-
Q 005227 381 TQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRN--LVSLVGYCDEEGEQMLVYEFMSNGT- 457 (707)
Q Consensus 381 ~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~n--Iv~l~~~~~~~~~~~lV~E~~~~gs- 457 (707)
..||+|..+.||+. .+..+++|...... ......+|.++++.+..-. +.+.+++....+...+|||+++|.+
T Consensus 7 ~~i~~G~t~~~y~~---~~~~~VlR~~~~~~--~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G~~~ 81 (226)
T TIGR02172 7 TQTGEGGNGESYTH---KTGKWMLKLYNPGF--DKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVGKRS 81 (226)
T ss_pred eeecCCCCcceeEe---cCCCEEEEeCCCCC--CHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCCccc
Confidence 67899999999984 24457788876533 3345788999999886433 4667778777778889999998863
Q ss_pred HHHHH---------------------hhcCCCCcCHHHHH-HHHH----------HHHH-HHHHHHhC-CCCCeEecCCC
Q 005227 458 LRDQL---------------------SAKSKEPLGFAMRL-SIAL----------GSSR-GILYLHTE-ADPPVFHRDIK 503 (707)
Q Consensus 458 L~~~l---------------------~~~~~~~l~~~~~~-~i~~----------~ia~-gL~yLH~~-~~~~ivH~Dlk 503 (707)
+...+ |.-........... .+.. .+.+ ...+|... ..+.++|+|+.
T Consensus 82 ~~~~~~~~~~~~~~l~~~la~~l~~lH~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~HgD~~ 161 (226)
T TIGR02172 82 FSRIISDNPSRLEEIAKIFAEMAKKLHSTKCDTSTFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKEVPDTSTCLHGDFQ 161 (226)
T ss_pred hhhhhcCCHHHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhCCCCCceEecCCC
Confidence 21111 11100111111100 0000 0001 12222211 23457899999
Q ss_pred CCCEEEcCCCcEEEeeecccc
Q 005227 504 ASNILLDHKFTAKVADFGLSR 524 (707)
Q Consensus 504 p~NILl~~~~~~kl~DFGla~ 524 (707)
|.||++++++ +.|+||+.+.
T Consensus 162 ~~Nii~~~~~-~~iIDwe~a~ 181 (226)
T TIGR02172 162 IGNLITSGKG-TYWIDLGDFG 181 (226)
T ss_pred CCcEEEcCCC-cEEEechhcC
Confidence 9999999988 9999999775
No 492
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=98.27 E-value=1.4e-05 Score=78.59 Aligned_cols=152 Identities=18% Similarity=0.158 Sum_probs=100.8
Q ss_pred ccHHHHHHHhcCCCccceEe---eeCceEEEEEEeCCCcEEEEEEeccCChhhH------------------------HH
Q 005227 365 FTYGEMALATNNFNSSTQIG---QGGYGKVYKGILPDGTVVAVKRAQEGSLQGE------------------------KE 417 (707)
Q Consensus 365 ~~~~~l~~~~~~~~~~~~lG---~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~------------------------~~ 417 (707)
.+++.+.....+..+.+..| +|.-+.||+|...++..||||+......... ..
T Consensus 35 ~t~~~l~~L~~rg~i~~~~g~istGKEA~Vy~a~~~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W 114 (268)
T COG1718 35 RTLETLRRLLSRGVITELVGCISTGKEANVYLAETGDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAW 114 (268)
T ss_pred HHHHHHHHHhcCCceeeeEeeecCCcceEEEeeccCCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHH
Confidence 45566666666666666655 5666789999988899999998764321110 12
Q ss_pred HHHHHHHHHccC--CCcceeEEEEEEeCCeEEEEEecCCCCC-HHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHh-CC
Q 005227 418 FLTEIQFLSRLH--HRNLVSLVGYCDEEGEQMLVYEFMSNGT-LRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHT-EA 493 (707)
Q Consensus 418 ~~~E~~~l~~l~--h~nIv~l~~~~~~~~~~~lV~E~~~~gs-L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~ 493 (707)
..+|+.-|+++. +-.+.+.+++. .-.|||||+.... -.-.|++- ++.......+..++++.+.-|-. .+
T Consensus 115 ~~kEf~NL~R~~eAGVrvP~Pi~~~----~nVLvMEfIg~~g~pAP~LkDv---~~e~~e~~~~~~~~v~~~~~l~~~a~ 187 (268)
T COG1718 115 ARKEFRNLKRAYEAGVRVPEPIAFR----NNVLVMEFIGDDGLPAPRLKDV---PLELEEAEGLYEDVVEYMRRLYKEAG 187 (268)
T ss_pred HHHHHHHHHHHHHcCCCCCCceeec----CCeEEEEeccCCCCCCCCcccC---CcCchhHHHHHHHHHHHHHHHHHhcC
Confidence 356777777763 33444445444 3479999995431 11112111 12222566677778888888877 55
Q ss_pred CCCeEecCCCCCCEEEcCCCcEEEeeecccccCC
Q 005227 494 DPPVFHRDIKASNILLDHKFTAKVADFGLSRLAP 527 (707)
Q Consensus 494 ~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~ 527 (707)
+||+||..-|||+. ++.+.|+|||-|....
T Consensus 188 ---LVHgDLSEyNiL~~-~~~p~iID~~QaV~~~ 217 (268)
T COG1718 188 ---LVHGDLSEYNILVH-DGEPYIIDVSQAVTID 217 (268)
T ss_pred ---cccccchhhheEEE-CCeEEEEECccccccC
Confidence 99999999999999 8899999999887554
No 493
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=98.25 E-value=2.2e-07 Score=96.70 Aligned_cols=129 Identities=21% Similarity=0.283 Sum_probs=69.4
Q ss_pred CCCceEEEeeCCcCCCCCC--C-cCCCCcccEEeccCCcCcccCCCcccc---------------------------cCc
Q 005227 1 MSKLLKLSLRNCSLQGPMP--D-LSRIPNLGYLDLSSNQLNGSIPPGRLS---------------------------LNI 50 (707)
Q Consensus 1 L~~L~~L~L~~N~l~~~~~--~-~~~l~~L~~L~L~~N~l~g~ip~~~~~---------------------------~~L 50 (707)
|++++.||||.|-|...-+ . ...|++|+.|+||.|+|.-........ ++|
T Consensus 145 ~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~~lK~L~l~~CGls~k~V~~~~~~fPsl 224 (505)
T KOG3207|consen 145 LPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLLSHLKQLVLNSCGLSWKDVQWILLTFPSL 224 (505)
T ss_pred CCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhhhhhheEEeccCCCCHHHHHHHHHhCCcH
Confidence 4566667777776665444 2 345666777777777666222221111 144
Q ss_pred cEEEccCccCCCCCCcccCCCcccceEeccCcccccCCC--CcccccccCCCCccceEEccCccCCCC--CCC------C
Q 005227 51 TTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIP--SSIWQSRTLNATETFILDFQNNNLTNI--SGS------F 120 (707)
Q Consensus 51 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p--~~~~~l~~L~~~~l~~L~l~~N~l~~~--~~~------~ 120 (707)
+.|+|..|...+.--.....+..|+.|||++|++- ..+ ...+.++.|+ .|+++.+.++.+ |+. .
T Consensus 225 ~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li-~~~~~~~~~~l~~L~-----~Lnls~tgi~si~~~d~~s~~kt~ 298 (505)
T KOG3207|consen 225 EVLYLEANEIILIKATSTKILQTLQELDLSNNNLI-DFDQGYKVGTLPGLN-----QLNLSSTGIASIAEPDVESLDKTH 298 (505)
T ss_pred HHhhhhcccccceecchhhhhhHHhhccccCCccc-ccccccccccccchh-----hhhccccCcchhcCCCccchhhhc
Confidence 55555555322222233344556677777777665 444 2233444333 667777777664 332 1
Q ss_pred CCCCCceeeccCCCc
Q 005227 121 NIPPNVTVRLRGNPF 135 (707)
Q Consensus 121 ~~~~l~~l~l~~N~~ 135 (707)
.+++|+.|++..|++
T Consensus 299 ~f~kL~~L~i~~N~I 313 (505)
T KOG3207|consen 299 TFPKLEYLNISENNI 313 (505)
T ss_pred ccccceeeecccCcc
Confidence 567777777777775
No 494
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=98.24 E-value=1.6e-05 Score=77.54 Aligned_cols=136 Identities=18% Similarity=0.189 Sum_probs=91.4
Q ss_pred hcCCCccceEeeeCceEEEEEEeCCCcEEEEEEeccCChhhHHHH---------HHHHHHHHccC---CCcceeEEEEEE
Q 005227 374 TNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEF---------LTEIQFLSRLH---HRNLVSLVGYCD 441 (707)
Q Consensus 374 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~---------~~E~~~l~~l~---h~nIv~l~~~~~ 441 (707)
..+|...+++-......|.+-.. +|+.+++|.........++.| .+++..+..++ ......++.+..
T Consensus 30 ~~~~~~~kv~k~~~r~~ValIei-~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl~~e 108 (229)
T PF06176_consen 30 DNNYKIIKVFKNTKRNYVALIEI-DGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYLAAE 108 (229)
T ss_pred hCCceEEEeecCCCccEEEEEEE-CCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCccccccceeeee
Confidence 56787788887777666766655 678899998776544333322 33444444443 333333333322
Q ss_pred -----eCCeEEEEEecCCCCCHHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEE
Q 005227 442 -----EEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAK 516 (707)
Q Consensus 442 -----~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~k 516 (707)
.....++||||++|..|.++.. ++. .++..+.+++.-+|+.| ++|+|..|.|+++++++ ++
T Consensus 109 kk~~~~~~~~~ll~EYIeG~~l~d~~~------i~e----~~~~ki~~~ikqlH~~G---~~HGD~hpgNFlv~~~~-i~ 174 (229)
T PF06176_consen 109 KKIFRYTSSYVLLMEYIEGVELNDIED------IDE----DLAEKIVEAIKQLHKHG---FYHGDPHPGNFLVSNNG-IR 174 (229)
T ss_pred eeeccceeEEEEEEEEecCeecccchh------cCH----HHHHHHHHHHHHHHHcC---CccCCCCcCcEEEECCc-EE
Confidence 2235678999999988766542 222 24456777899999999 99999999999999654 99
Q ss_pred Eeeecccc
Q 005227 517 VADFGLSR 524 (707)
Q Consensus 517 l~DFGla~ 524 (707)
+.||+..+
T Consensus 175 iID~~~k~ 182 (229)
T PF06176_consen 175 IIDTQGKR 182 (229)
T ss_pred EEECcccc
Confidence 99998654
No 495
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=98.20 E-value=2.9e-07 Score=101.18 Aligned_cols=127 Identities=27% Similarity=0.317 Sum_probs=93.9
Q ss_pred CCceEEEeeCCcCCCCCCCcCCCCcccEEeccCCcCcccCCCccccc-CccEEEccCccCCCCCCcccCCCcccceEecc
Q 005227 2 SKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSL-NITTIKLSNNKLTGTIPSNFSGLPRLQRLFIA 80 (707)
Q Consensus 2 ~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~g~ip~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls 80 (707)
..++.++|..|.+......+..+++|..|+|.+|+|. .|...+..+ +|++|+|++|+|+..- .+..++.|+.|+++
T Consensus 72 ~~l~~l~l~~n~i~~~~~~l~~~~~l~~l~l~~n~i~-~i~~~l~~~~~L~~L~ls~N~I~~i~--~l~~l~~L~~L~l~ 148 (414)
T KOG0531|consen 72 TSLKELNLRQNLIAKILNHLSKLKSLEALDLYDNKIE-KIENLLSSLVNLQVLDLSFNKITKLE--GLSTLTLLKELNLS 148 (414)
T ss_pred HhHHhhccchhhhhhhhcccccccceeeeeccccchh-hcccchhhhhcchheecccccccccc--chhhccchhhheec
Confidence 4566777888888875556888888999999999998 776633333 8899999999988443 36677778899999
Q ss_pred CcccccCCCCcccccccCCCCccceEEccCccCCCCCCC--CCCCCCceeeccCCCcccc
Q 005227 81 NNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGS--FNIPPNVTVRLRGNPFCLN 138 (707)
Q Consensus 81 ~N~l~g~~p~~~~~l~~L~~~~l~~L~l~~N~l~~~~~~--~~~~~l~~l~l~~N~~~~~ 138 (707)
+|.|+ .+.. +.. +..|+.+++++|+++.+... -.+.++..+.+.+|.+...
T Consensus 149 ~N~i~-~~~~-~~~-----l~~L~~l~l~~n~i~~ie~~~~~~~~~l~~l~l~~n~i~~i 201 (414)
T KOG0531|consen 149 GNLIS-DISG-LES-----LKSLKLLDLSYNRIVDIENDELSELISLEELDLGGNSIREI 201 (414)
T ss_pred cCcch-hccC-Ccc-----chhhhcccCCcchhhhhhhhhhhhccchHHHhccCCchhcc
Confidence 99988 4443 222 23455888999998888772 4778888888888887544
No 496
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=98.19 E-value=2e-05 Score=79.05 Aligned_cols=142 Identities=18% Similarity=0.194 Sum_probs=85.4
Q ss_pred cceEeeeCceEEEEEEeCCCcEEEEEEeccCChhhHHHHHHHHHHHHccCCC--cceeEEEEEE---eCCeEEEEEecCC
Q 005227 380 STQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHR--NLVSLVGYCD---EEGEQMLVYEFMS 454 (707)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~--nIv~l~~~~~---~~~~~~lV~E~~~ 454 (707)
.+.++.|..+.||+....+ +.+++|..... .....+.+|..+++.+... .+.+++.+.. .....+++|++++
T Consensus 2 i~~l~~G~~n~~~~v~~~~-~~~vlK~~~~~--~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~~i~ 78 (239)
T PF01636_consen 2 IRPLSGGFSNRVYRVTTDD-GRYVLKFYRPP--DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLMEYIP 78 (239)
T ss_dssp EEEEEESSSSEEEEEEETT-SEEEEEEESSH--HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEEEEES
T ss_pred CccCCCCCeeeEEEEEECC-cEEEEEEeCCC--CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEEEEec
Confidence 4679999999999999877 68999997654 4456788899998888533 3556666543 3345789999999
Q ss_pred CCCHHH----------------HH---hhc--CCCCcCHHH---------HHHH------------HHHHHH-HHHHHHh
Q 005227 455 NGTLRD----------------QL---SAK--SKEPLGFAM---------RLSI------------ALGSSR-GILYLHT 491 (707)
Q Consensus 455 ~gsL~~----------------~l---~~~--~~~~l~~~~---------~~~i------------~~~ia~-gL~yLH~ 491 (707)
+..+.. .+ +.. ...+..... .... ...+.+ .++.+++
T Consensus 79 g~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (239)
T PF01636_consen 79 GRPLDDELSPEQRPELLRQLGRALAQLHQVPPPFSPFADWPEWRLEFLRQLESWTARLRASELFDDLEELEERLLQELEA 158 (239)
T ss_dssp SEEHHHTSTHHHHHHHHHHHHHHHHHHHHSHTTCCCHTHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccchhhhhhcccccccccccccccccccccccccccccccccchhhhhhhHHHHHHHHHHHHh
Confidence 988877 11 111 111111110 0000 111222 2333332
Q ss_pred ----CCCCCeEecCCCCCCEEEc-CCCcEEEeeecccc
Q 005227 492 ----EADPPVFHRDIKASNILLD-HKFTAKVADFGLSR 524 (707)
Q Consensus 492 ----~~~~~ivH~Dlkp~NILl~-~~~~~kl~DFGla~ 524 (707)
.....++|+|+.+.||+++ +++.+-|.||+.+.
T Consensus 159 ~~~~~~~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~ 196 (239)
T PF01636_consen 159 LLPKPLPPVLIHGDLHPGNILVDPSDGRIGIIDFEDAG 196 (239)
T ss_dssp HHHCCSCEEEE-SS-SGGGEEEESSTTEEEE--GTT-E
T ss_pred hhccCCCcEEEEeccccccceeeeccceeEEEecccce
Confidence 1334599999999999999 66666899998765
No 497
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=98.19 E-value=2.7e-07 Score=100.40 Aligned_cols=182 Identities=20% Similarity=0.187 Sum_probs=131.3
Q ss_pred cceEeeeCceEEEEEEeCCCcEEEEEEeccCChhhHHHHHHHHHHHHccCCCc-ceeEEEEEEeCCeEEEEEecCCCC-C
Q 005227 380 STQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRN-LVSLVGYCDEEGEQMLVYEFMSNG-T 457 (707)
Q Consensus 380 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~n-Iv~l~~~~~~~~~~~lV~E~~~~g-s 457 (707)
.+-+++|+++++||.+-.-.+....+.+... ....-++++|.+++||| .+..++-++.+...+++++++.++ +
T Consensus 247 fh~fvK~altknpKkRptaeklL~h~fvs~~-----l~~rl~~eLLdK~n~P~~~v~~~~d~~~E~~~~i~~~i~s~~rs 321 (829)
T KOG0576|consen 247 FHNFVKGALTKNPKKRPTAEKLLQHPFVSQT-----LSRRLAIELLDKVNNPNPVVRYLEDYDGEDYLWIPMRICSTGRS 321 (829)
T ss_pred HHHHHHHHhcCCCccCCChhhheeceeeccc-----hhhHHHHHHHHHccCCCCcccccccCCcccccchhhhhhcCCcc
Confidence 4567899999999988533333446655432 34556889999999999 777777778888899999999776 2
Q ss_pred HHHHHhhcCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEeeecccccCCCCCCCCcccc
Q 005227 458 LRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPA 537 (707)
Q Consensus 458 L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~ 537 (707)
-..... .....+...+...+.+.-+++++|+|+.. =+|+| ||+..+ +..|.+||+....+....
T Consensus 322 ~~~~~~-~se~~~~~~~~~~~~r~et~~l~~l~~~~---~~~~d----~~l~s~-~~~~~~~~~v~~~L~~~~------- 385 (829)
T KOG0576|consen 322 SALEMT-VSEIALEQYQFAYPLRKETRPLAELHSSY---KVHRD----NILGSE-EEVKLLDFAVPPQLTRTM------- 385 (829)
T ss_pred ccccCC-hhhHhhhhhhhhhhhhhhccccccccccc---ccCcc----cccccc-cccccccccCCcccCccc-------
Confidence 211110 11112333444556666678899999864 48998 777666 688999999887664321
Q ss_pred ceecccccCCCccchhhhccCCCCCchhhHHHHHHHHHHHcCCCCC
Q 005227 538 HVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPI 583 (707)
Q Consensus 538 ~~~~~~~gt~~y~aPE~~~~~~~s~~sDVwSlGvll~elltG~~pf 583 (707)
......+++.|+|||+.....+....|+|+.|+-..++--|..|-
T Consensus 386 -~~~t~~~~~~~~~pev~~~~~~~~~p~~~~~~~~~~~~ap~~pPr 430 (829)
T KOG0576|consen 386 -KPRTAIGTPEPLAPEVIQENTIDGCPDSGSLAVSAIQMAPGLPPR 430 (829)
T ss_pred -ccccCCCCCCCCCchhhcccccccCCCccCCCcchhhcCCCCCCC
Confidence 344567899999999999999999999999998777777776664
No 498
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.18 E-value=9.9e-08 Score=84.01 Aligned_cols=105 Identities=20% Similarity=0.341 Sum_probs=86.4
Q ss_pred CceEEEeeCCcCCCCCCCcC-CCCcccEEeccCCcCcccCCCccccc-CccEEEccCccCCCCCCcccCCCcccceEecc
Q 005227 3 KLLKLSLRNCSLQGPMPDLS-RIPNLGYLDLSSNQLNGSIPPGRLSL-NITTIKLSNNKLTGTIPSNFSGLPRLQRLFIA 80 (707)
Q Consensus 3 ~L~~L~L~~N~l~~~~~~~~-~l~~L~~L~L~~N~l~g~ip~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls 80 (707)
.|+.++|++|.+...++.|. .++.++.|+|++|.|+ .+|.++..+ .|+.|+++.|.|. ..|.-|..|.+|..|+..
T Consensus 54 el~~i~ls~N~fk~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~lNl~~N~l~-~~p~vi~~L~~l~~Lds~ 131 (177)
T KOG4579|consen 54 ELTKISLSDNGFKKFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRSLNLRFNPLN-AEPRVIAPLIKLDMLDSP 131 (177)
T ss_pred eEEEEecccchhhhCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhhcccccCccc-cchHHHHHHHhHHHhcCC
Confidence 57889999999999988644 5679999999999999 999997766 8999999999999 889999899999999999
Q ss_pred CcccccCCCCcccccccCCCCccceEEccCccCCC
Q 005227 81 NNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTN 115 (707)
Q Consensus 81 ~N~l~g~~p~~~~~l~~L~~~~l~~L~l~~N~l~~ 115 (707)
+|.+. .||..+.....+. ..++.+|.+.+
T Consensus 132 ~na~~-eid~dl~~s~~~a-----l~~lgnepl~~ 160 (177)
T KOG4579|consen 132 ENARA-EIDVDLFYSSLPA-----LIKLGNEPLGD 160 (177)
T ss_pred CCccc-cCcHHHhccccHH-----HHHhcCCcccc
Confidence 99998 8887653322222 45566666654
No 499
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=98.15 E-value=5.1e-07 Score=99.31 Aligned_cols=127 Identities=24% Similarity=0.254 Sum_probs=93.3
Q ss_pred CCCceEEEeeCCcCCCCCCCcCCCCcccEEeccCCcCcccCCCcccccCccEEEccCccCCCCCCcccCCCcccceEecc
Q 005227 1 MSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIA 80 (707)
Q Consensus 1 L~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~g~ip~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls 80 (707)
+++|+.|+|.+|+|.++...+..+++|++|+|++|.|+ .+..--....|+.|++++|.|+ .+. .+..+++|+.++++
T Consensus 94 ~~~l~~l~l~~n~i~~i~~~l~~~~~L~~L~ls~N~I~-~i~~l~~l~~L~~L~l~~N~i~-~~~-~~~~l~~L~~l~l~ 170 (414)
T KOG0531|consen 94 LKSLEALDLYDNKIEKIENLLSSLVNLQVLDLSFNKIT-KLEGLSTLTLLKELNLSGNLIS-DIS-GLESLKSLKLLDLS 170 (414)
T ss_pred ccceeeeeccccchhhcccchhhhhcchheeccccccc-cccchhhccchhhheeccCcch-hcc-CCccchhhhcccCC
Confidence 46899999999999977776889999999999999999 7765333337999999999999 444 46679999999999
Q ss_pred CcccccCCCCc-ccccccCCCCccceEEccCccCCCCCCCCCCCCCceeeccCCCcc
Q 005227 81 NNSLSGSIPSS-IWQSRTLNATETFILDFQNNNLTNISGSFNIPPNVTVRLRGNPFC 136 (707)
Q Consensus 81 ~N~l~g~~p~~-~~~l~~L~~~~l~~L~l~~N~l~~~~~~~~~~~l~~l~l~~N~~~ 136 (707)
+|+++ .+... +..+.++ ..+++.+|.+..+...-.+..+..+++..|.+.
T Consensus 171 ~n~i~-~ie~~~~~~~~~l-----~~l~l~~n~i~~i~~~~~~~~l~~~~l~~n~i~ 221 (414)
T KOG0531|consen 171 YNRIV-DIENDELSELISL-----EELDLGGNSIREIEGLDLLKKLVLLSLLDNKIS 221 (414)
T ss_pred cchhh-hhhhhhhhhccch-----HHHhccCCchhcccchHHHHHHHHhhcccccce
Confidence 99998 44442 2333333 377888888776654333333334455666654
No 500
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.14 E-value=8.4e-08 Score=105.07 Aligned_cols=108 Identities=28% Similarity=0.378 Sum_probs=85.3
Q ss_pred CCCceEEEeeCCcCCCCCCCcCCCCcccEEeccCCcCcccCCCcccc-cCccEEEccCccCCCCCCcccCCCcccceEec
Q 005227 1 MSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLS-LNITTIKLSNNKLTGTIPSNFSGLPRLQRLFI 79 (707)
Q Consensus 1 L~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~g~ip~~~~~-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 79 (707)
|+.|+.|||++|+++..- .+..|+.|++|||++|.|+ .+|.--.. ..|+.|+|+||.++ ++- .+.+|.+|+.|||
T Consensus 186 l~ale~LnLshNk~~~v~-~Lr~l~~LkhLDlsyN~L~-~vp~l~~~gc~L~~L~lrnN~l~-tL~-gie~LksL~~LDl 261 (1096)
T KOG1859|consen 186 LPALESLNLSHNKFTKVD-NLRRLPKLKHLDLSYNCLR-HVPQLSMVGCKLQLLNLRNNALT-TLR-GIENLKSLYGLDL 261 (1096)
T ss_pred HHHhhhhccchhhhhhhH-HHHhcccccccccccchhc-cccccchhhhhheeeeecccHHH-hhh-hHHhhhhhhccch
Confidence 356899999999999765 7889999999999999999 99974332 38999999999999 443 4789999999999
Q ss_pred cCcccccCCC-CcccccccCCCCccceEEccCccCCCCC
Q 005227 80 ANNSLSGSIP-SSIWQSRTLNATETFILDFQNNNLTNIS 117 (707)
Q Consensus 80 s~N~l~g~~p-~~~~~l~~L~~~~l~~L~l~~N~l~~~~ 117 (707)
++|-|.+--- ..++.+. .|..|+|.+|.|.--|
T Consensus 262 syNll~~hseL~pLwsLs-----~L~~L~LeGNPl~c~p 295 (1096)
T KOG1859|consen 262 SYNLLSEHSELEPLWSLS-----SLIVLWLEGNPLCCAP 295 (1096)
T ss_pred hHhhhhcchhhhHHHHHH-----HHHHHhhcCCccccCH
Confidence 9999984311 1123333 4558999999887654
Done!