BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005232
(707 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9Y5L0|TNPO3_HUMAN Transportin-3 OS=Homo sapiens GN=TNPO3 PE=1 SV=3
Length = 923
Score = 204 bits (520), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 185/728 (25%), Positives = 331/728 (45%), Gaps = 96/728 (13%)
Query: 7 VKEALNALYHHPDDAVRMQADRWLQDFQHTIDAWQVADNLLHDATSNLETLIFCSQTLRS 66
V +A+ ALYH PD + + +A WL + Q ++ AW+++D LL ++E+ F +QT++
Sbjct: 11 VYQAVQALYHDPDPSGKERASFWLGELQRSVHAWEISDQLLQ-IRQDVESCYFAAQTMKM 69
Query: 67 KVQRDVEELPSEAVRGLQDSLNTLLKKFHKGPPKVRTQISIAVAALAVHISAEDWGGGGI 126
K+Q ELP+++ L+DSL T ++ P + TQ+++A+A LA+ + + W G
Sbjct: 70 KIQTSFYELPTDSHASLRDSLLTHIQNLKDLSPVIVTQLALAIADLALQMPS--W--KGC 125
Query: 127 VNWLRDEMNSHPEFVPGFLELLTVLPEEVFNYKIAARPERRRQFEKELTSQMEVALSTLT 186
V L ++ ++ +P LE+LTVLPEEV + + RR + ++L +S L
Sbjct: 126 VQTLVEKYSNDVTSLPFLLEILTVLPEEVHSRSLRIGANRRTEIIEDLAFYSSTVVSLLM 185
Query: 187 ACLHINELKE----QVLEAFASWLRLKHRIPGSVLASHPLVLTALSSLHSEILSEASVNV 242
C+ E +V SW L VL S+ + L +L E+L + +
Sbjct: 186 TCVEKAGTDEKMLMKVFRCLGSWFNL------GVLDSNFMANNKLLALLFEVLQQ---DK 236
Query: 243 ISELIHYSAAGSSGGA-------TVNMPLIQVIVPQIMSLKA--HLTDSSKDEEDVKAIA 293
S +H +A+ A N+PL + +++L+ H+ + +D + V
Sbjct: 237 TSSNLHEAASDCVCSALYAIENVETNLPLAMQLFQGVLTLETAYHMAVAREDLDKVLNYC 296
Query: 294 RLFADMGDSYVELIATGSDES---MLIVHALLEVASHPEYDIASMTFNFWHSLQVILTKR 350
R+F ++ ++++E I + + + LL A HP+Y++ ++FNFW+ L L K
Sbjct: 297 RIFTELCETFLEKIVCTPGQGLGDLRTLELLLICAGHPQYEVVEISFNFWYRLGEHLYKT 356
Query: 351 DSYISFGNEASAEAERSRRLQVFRSAYESLVSLVSFRVQYPQDYQDLSLE--DLKEFKHT 408
+ + G +F++ + L+ ++ Q D++ + E D EF+
Sbjct: 357 NDEVIHG--------------IFKAYIQRLLHALARHCQLEPDHEGVPEETDDFGEFR-- 400
Query: 409 RYDLACCSSSTLTESVMLIAVADVLIDAASVLGGDATLKILYIKFVEGVACCGNKHNEWR 468
+ V+D++ D ++G LY EG + W
Sbjct: 401 ------------------MRVSDLVKDLIFLIGSMECFAQLYSTLKEG-------NPPWE 435
Query: 469 PAEAALFCIRAISTYVSVVEAEVMPQVMALLPKLPQQPQLLQTVC--LTIGAYSKWFDAA 526
EA LF + AI+ V+ E P ++ +L + + P+ + T +I + +
Sbjct: 436 VTEAVLFIMAAIA---KSVDPENNPTLVEVLEGVVRLPETVHTAVRYTSIELVGEMSEVV 492
Query: 527 SSDPSILASVLSILTSGMSTSEDTAAAAALAFRHICDDCRKKLCGYLDGLYNVYRTAVNG 586
+P L VL L G+ + A+AAA A +IC CR + + +GL + R+
Sbjct: 493 DRNPQFLDPVLGYLMKGLC-EKPLASAAAKAIHNICSVCRDHMAQHFNGLLEIARSL--- 548
Query: 587 EGSLKVSAEDSLHLVEALSMVITELPQVDAKKALEMLCLPVVTPLQEIINQGPEILQKKH 646
S +S E ++ L++ ++V+ LP + L LC V L+++++Q P
Sbjct: 549 -DSFLLSPEAAVGLLKGTALVLARLPLDKITECLSELCSVQVMALKKLLSQEPS---NGI 604
Query: 647 PRDLTVHIDRFAYIFRYVN--------HPEAVADAIQRLWPIFKAIFDIRAWDMRTMESL 698
D TV +DR A IFR+ N HP IQ +WP+ + D R +E
Sbjct: 605 SSDPTVFLDRLAVIFRHTNPIVENGQTHP--CQKVIQEIWPVLSETLNKHRADNRIVERC 662
Query: 699 CRACKYAV 706
CR ++AV
Sbjct: 663 CRCLRFAV 670
>sp|Q6P2B1|TNPO3_MOUSE Transportin-3 OS=Mus musculus GN=Tnpo3 PE=1 SV=1
Length = 923
Score = 200 bits (508), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 183/728 (25%), Positives = 329/728 (45%), Gaps = 96/728 (13%)
Query: 7 VKEALNALYHHPDDAVRMQADRWLQDFQHTIDAWQVADNLLHDATSNLETLIFCSQTLRS 66
V +A+ ALYH PD + + +A WL + Q ++ AW+++D LL ++E+ F +QT++
Sbjct: 11 VYQAVQALYHDPDPSGKERASFWLGELQRSVHAWEISDQLLQ-IRQDVESCYFAAQTMKM 69
Query: 67 KVQRDVEELPSEAVRGLQDSLNTLLKKFHKGPPKVRTQISIAVAALAVHISAEDWGGGGI 126
K+Q ELP+++ L+DSL T ++ P + TQ+++A+A LA+ + + W G
Sbjct: 70 KIQTSFYELPTDSHASLRDSLLTHIQNLKDLSPVIVTQLALAIADLALQMPS--W--KGC 125
Query: 127 VNWLRDEMNSHPEFVPGFLELLTVLPEEVFNYKIAARPERRRQFEKELTSQMEVALSTLT 186
V L ++ ++ +P LE+LTVLPEEV + + RR + ++L +S L
Sbjct: 126 VQTLVEKYSNDVTSLPFLLEILTVLPEEVHSRSLRIGANRRTEIIEDLAFYSSTVVSLLM 185
Query: 187 ACLHINELKEQVL----EAFASWLRLKHRIPGSVLASHPLVLTALSSLHSEILSEASVNV 242
C+ E++L SW L VL S+ + L +L E+L + +
Sbjct: 186 TCVEKAGTDEKMLMKVFRCLGSWFNL------GVLDSNFMANNKLLALLFEVLQQ---DK 236
Query: 243 ISELIHYSAAGSSGGA-------TVNMPLIQVIVPQIMSLKA--HLTDSSKDEEDVKAIA 293
S +H +A+ A N+PL + +++L+ H+ + +D + V
Sbjct: 237 TSSNLHEAASDCVCSALYAIENVETNLPLAMQLFQGVLTLETAYHMAVAREDLDKVLNYC 296
Query: 294 RLFADMGDSYVELIATGSDES---MLIVHALLEVASHPEYDIASMTFNFWHSLQVILTKR 350
R+F ++ ++++E I + + + LL A HP+Y++ ++FNFW+ L L K
Sbjct: 297 RIFTELCETFLEKIVCTPGQGLGDLRTLELLLICAGHPQYEVVEISFNFWYRLGEHLYKT 356
Query: 351 DSYISFGNEASAEAERSRRLQVFRSAYESLVSLVSFRVQYPQDYQDLSLE--DLKEFKHT 408
+ + +F++ + L+ ++ Q D++ + E D EF+
Sbjct: 357 NDEVIHS--------------IFKAYIQRLLHALARHCQLEPDHEGVPEETDDFGEFR-- 400
Query: 409 RYDLACCSSSTLTESVMLIAVADVLIDAASVLGGDATLKILYIKFVEGVACCGNKHNEWR 468
+ V+D++ D ++G LY EG + W
Sbjct: 401 ------------------MRVSDLVKDLIFLIGSMECFAQLYSTLKEG-------NPPWE 435
Query: 469 PAEAALFCIRAISTYVSVVEAEVMPQVMALLPKLPQQPQLLQTVC--LTIGAYSKWFDAA 526
EA LF + AI+ V+ E P ++ +L + P+ + T +I + +
Sbjct: 436 VTEAVLFIMAAIA---KSVDPENNPTLVEVLEGVVHLPETVHTAVRYTSIELVGEMSEVV 492
Query: 527 SSDPSILASVLSILTSGMSTSEDTAAAAALAFRHICDDCRKKLCGYLDGLYNVYRTAVNG 586
+P L VL L G+ + A+AAA A +IC CR + + +GL + +
Sbjct: 493 DRNPQFLDPVLGYLMKGLC-EKPLASAAAKAIHNICSVCRDHMAQHFNGLLEIAHSL--- 548
Query: 587 EGSLKVSAEDSLHLVEALSMVITELPQVDAKKALEMLCLPVVTPLQEIINQGPEILQKKH 646
S +S E ++ L++ ++V+ LP + L LC V L+++++Q P
Sbjct: 549 -DSFMLSPEAAVGLLKGTALVLARLPLDKITECLSELCSVQVMALKKLLSQEPS---NGI 604
Query: 647 PRDLTVHIDRFAYIFRYVN--------HPEAVADAIQRLWPIFKAIFDIRAWDMRTMESL 698
D TV +DR A IFR+ N HP IQ +WP+ + D R +E
Sbjct: 605 SSDPTVFLDRLAVIFRHTNPIVENGQTHP--CQKVIQEIWPVLSETLNKHRADNRIVERC 662
Query: 699 CRACKYAV 706
CR ++AV
Sbjct: 663 CRCLRFAV 670
>sp|Q9USZ2|YNR7_SCHPO Uncharacterized protein C11G11.07 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPBC11G11.07 PE=4 SV=2
Length = 955
Score = 164 bits (415), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 158/615 (25%), Positives = 287/615 (46%), Gaps = 94/615 (15%)
Query: 6 TVKEALNALYHHPDDAVRMQADRWLQDFQHTIDAWQVADNLLHDATSNLETLIFCSQTLR 65
T+ AL LY + D ++QA+ +L++FQ + AWQ+ ++L+ S++E +F +QTLR
Sbjct: 3 TLLSALATLYANTDREQKLQANNYLEEFQKSPAAWQICFSILNQDDSSIEAKLFAAQTLR 62
Query: 66 SKVQRDVEELPSEAVRGLQDSLNTLLKKFHKGPPKVRTQISIAVAALAVHISAEDWGGGG 125
K+ D +LP E ++SL L P + +++ +AA+A+H++ +W
Sbjct: 63 QKIVYDFHQLPKETHIEFRNSLLQLFLAAKDSPRPLLVSLAVCMAAIALHMT--EWH--- 117
Query: 126 IVNWLRDEMNSHPEFVPG---FLELLTVLPEEVFNYKIAARPERRRQFEKELTSQMEVAL 182
N + D + P L+ L+VLPEE A+ P + +EL +++ L
Sbjct: 118 --NVIADVFQACSSKDPSGRCVLQFLSVLPEE------ASDPRKTSLSWEELCIRVDELL 169
Query: 183 STLTACL------HINELKEQ----------VLEAFASWLRLKHRIPGSVLASHPLVLTA 226
+ +++ ++ VL + SWLR IP + + PL+ A
Sbjct: 170 RDNGPAVLELLVQYVDAVRASGSPSSADLGLVLTSLISWLR---EIPLDKVMASPLIELA 226
Query: 227 LSSLHSEILSEASVNVISELIHYSAAGSSGGATVNMPLIQVIVPQIMSLKAHLTDSSKDE 286
SL ++L E +V + L + + + M + P+++ L+ L + D
Sbjct: 227 FRSLDDDLLLEDAVEFLCALFNETKDVDETTDAILM-----LYPRLLELQPKLIAACDDP 281
Query: 287 EDVKAIARLFADMGDSYVELIATGSDESMLIVHALLEVASH-PEYDIASMTFNFWHSLQV 345
E +A+ RLFA+ G+++V LIA ++ + +V+ + +VA++ E + TF FW L+
Sbjct: 282 ETFRALGRLFAEAGEAWVVLIARMPNDFLPLVNCIAQVAANDTELEAIKFTFAFWWDLKQ 341
Query: 346 ILTKRDSYISFGNEASAEAERSRRLQVFRSAYESLVSLVSFRVQYPQD------------ 393
+ + D Y AEA Q+F Y LV ++ + YP+
Sbjct: 342 -MVELDVY--------AEAR-----QLFAPIYLELVRIIVRHLHYPRTEDLAINEQMASN 387
Query: 394 ---YQDLSLED-LKEFKHTRYDLACCSSSTLTESVMLIAVADVLIDAASVLGGDATLKIL 449
++D ED + F+H D+ L + ++ V+ L+ +S L +K+L
Sbjct: 388 EVLFEDRDAEDRFRSFRHEMGDV-------LKDCCVVAGVSSCLVQISSQL-----IKVL 435
Query: 450 YIKFVEGVACCGNKHNEWRPAEAALFCIRAISTYVSVVEAEVMPQVMALLPKLPQQPQLL 509
IK G+ W+ EA LF +RAI V E +V+ + +LP+LP+ ++
Sbjct: 436 KIK-ESGLP------YYWQDVEAPLFALRAIGRMVPANEDQVIGSLFQILPQLPENNKVR 488
Query: 510 QTVCLTIGAYSKWFDAASSDPSILASVLSILTSGMST-SEDTAAAAALAFRHICDDCRKK 568
L +G Y++W + L L+ +++G +++ +AAA A +H C DCR++
Sbjct: 489 YAATLFLGRYTEW---TAQHSEFLELQLNYISAGFEVANKEVQSAAAQALKHFCYDCREQ 545
Query: 569 LCGYLDGLYNVYRTA 583
L G+L L+ Y A
Sbjct: 546 LVGHLSQLHMFYLNA 560
>sp|Q99189|MTR10_YEAST mRNA transport regulator MTR10 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=MTR10 PE=1 SV=1
Length = 972
Score = 140 bits (353), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 154/630 (24%), Positives = 278/630 (44%), Gaps = 104/630 (16%)
Query: 23 RMQADRWLQDFQHTIDAWQVADNLL--HDATSNL-ETLIFCSQTLRSKVQRDVEELPSEA 79
+ +A ++L+ FQ + AW + + +L D T+ L E IF +QTLR+KV D+ +L +
Sbjct: 25 KNKALQFLEQFQRSTVAWSICNEILSKEDPTNALLELNIFAAQTLRNKVTYDLSQLENN- 83
Query: 80 VRGLQDSLNTLLKKFHKGPPKVRTQISIAVAALAVHISAEDWGGGGIVNWLRDEMNSHPE 139
+ +DSL TLL ++ + TQ+++A+A LA+ +W + + +NS P
Sbjct: 84 LPQFKDSLLTLLLSHNQK--LIITQLNVALARLAIQFL--EWQNP--IFEIISLLNSSPS 137
Query: 140 FVPGFLELLTVLPEEVFNYKIAARPERRRQFEKELTSQM----EVALSTLTACLHINELK 195
+ FL +LPEE + IA+ +F + + E L L +C+ + +
Sbjct: 138 ILLNFLR---ILPEETLD--IASTSLTEVEFNSRIHELIDPIAEDVLKFLVSCIDLLQNT 192
Query: 196 ----------EQVLEAFASWLRLKHRIP-GSVLASHPLVLTALSSLHSEILSEASVNVIS 244
EQ+L SW + P +L PL+ ++ + +E+ +
Sbjct: 193 DGNSSSSISLEQILRCLNSW---SYEFPVEQLLTVQPLINLVFETISNG--NESDMEAFD 247
Query: 245 ELIH-YSAAGSSGGATVNMPLIQVIVPQIMSLKA---------HLTDSSKDEEDVKAIAR 294
I T N LI + Q+M L+ H + D++ ++ + R
Sbjct: 248 SAIDCLCVILRESRDTTNEQLISALFHQLMLLQEKLLPTLFTDHPLNDEYDDDLLEGMTR 307
Query: 295 LFADMGDSYVELIATGSD--ESMLIVHALLEVASHPEYDIASMTFNFWHSL-QVILTKRD 351
LF + G+++ +I+ D + M++V +L + + D+ S TF FW + Q ++ R
Sbjct: 308 LFVEAGEAWSVVISKNPDFFKPMVLVLLML-TCKNEDLDVVSYTFPFWFNFKQSLVLPR- 365
Query: 352 SYISFGNEASAEAERSRRLQVFRSAYESLVSLVSFRVQYPQDYQDLSLEDLKEFKHTRYD 411
+ SR+ + + L++ + +QYP Q S E+ +FK RY
Sbjct: 366 ------------YQESRK--AYSDIFVKLINGIITHLQYPSG-QFSSKEEEDKFKDFRYH 410
Query: 412 LACCSSSTLTESVMLIAVADVLIDAASVLGGDATLKILYIKFVEGVACCGNKHNEWRPAE 471
+ DVL D +V+G L I+ + +N W+ E
Sbjct: 411 MG-----------------DVLKDCTAVVGTSEALSQPLIRIKSAIE----NNNSWQIME 449
Query: 472 AALFCIRAISTYVSVVEAEVMPQVMALLPKLPQQPQLLQTVCLTIGAYSKWFDAASSDPS 531
A LF +R ++ +S+ E ++P+++ ++ LP+Q ++ L +G Y++W + P
Sbjct: 450 APLFSLRTMAKEISLTENTILPEIIKIICNLPEQAKIRYASTLVLGRYTEW---TAKHPE 506
Query: 532 ILASVLSILTSGMSTSED--------TAAAAALAFRHICDDCRKKLCGYLDGLYNVYRTA 583
+L L + +G E TA++ AL F C DC K L GY+D L N +
Sbjct: 507 LLEVQLQYIFNGFQLHEGSSDMQSIITASSHALMF--FCSDCSKLLVGYIDQLINFF--- 561
Query: 584 VNGEGSLKVSAEDSLHLVEALSMVITELPQ 613
+N + S+ + E L + LS VI P+
Sbjct: 562 LNVQSSIDI--ESQFELCQGLSAVINNQPE 589
>sp|A7YWD2|IPO13_BOVIN Importin-13 OS=Bos taurus GN=IPO13 PE=2 SV=1
Length = 963
Score = 116 bits (291), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 154/659 (23%), Positives = 297/659 (45%), Gaps = 79/659 (11%)
Query: 6 TVKEALNALYHHPDDAVRMQADRWLQDFQHTIDAWQVADNLLH-DATSNLETLIFCSQTL 64
V++AL+ LY+ P+ + A +WL Q + AW + LL D ++ F + L
Sbjct: 25 NVEKALHQLYYDPNIENKNLAQKWLMQAQASPQAWHFSWQLLQPDKVPEIQ--YFGASAL 82
Query: 65 RSKVQRDVEELPSEAVRGLQDSLNTLLKKFHKGPPKVRTQISIAVAALAVHISAEDW--G 122
K+ R ++P++ L+ L T + +F G V T++ +A+A+LA+ + + W
Sbjct: 83 HIKISRYWSDIPTDQYESLKAQLFTQITRFASGSKIVLTRLCVALASLALSMMPDAWPCA 142
Query: 123 GGGIVNWLRDEMNSHPEFVPG----FLELLTVLPEEVFNYKIAARPERRRQFEK-ELTSQ 177
+V + E P G LELLTVLPEE ++ + P+ R+ + L +
Sbjct: 143 VADMVRLFQAE--DSPVDSQGRCLALLELLTVLPEE---FQTSRLPQYRKSLVRTSLAVE 197
Query: 178 MEVALSTLTACLHINE----LKEQVLEAFASWLRLKHRIPGSVLASHPLVLTALSSLHSE 233
L L ++++VL+ F+SW++L+ +P + L+ A ++L
Sbjct: 198 CGAVFPLLEQLLQQPSSPSCVRQKVLKCFSSWVQLE--VP--LQDCEALIQAAFAALQDS 253
Query: 234 ILSEASVNVISELIHYSAAGSSGGATVNMPLIQVIVPQIMSLKAHLTDS--SKDEEDVKA 291
L ++SV I I S A + + ++P ++ L+ L + + D E
Sbjct: 254 ELFDSSVEAIVNAI------SQPDAQRYVNTLLKLIPLVLGLQDQLRQAVQNGDMETSHG 307
Query: 292 IARLFADMGDSYVELIATGSD--ESML-IVHALLEVASHPEY-----DIASMTFNFWHSL 343
I R+ +G+++ + + +S L +V+ ++ P + +S+T FW++L
Sbjct: 308 ICRIAVALGENHSRALLDQVEHWQSFLALVNMIMFCTGIPGHFPVNETTSSLTLTFWYTL 367
Query: 344 QVILTKRDSYISFGNEASAEAERSRRLQVFRSAYESLVSLVSFRVQYPQD--YQDLSLED 401
Q D +SF E A + QV+R Y LV ++ + Q+P D Y S ++
Sbjct: 368 Q------DDILSFEAEKQAVYQ-----QVYRPVYFQLVDVLLHKAQFPSDEEYGFWSSDE 416
Query: 402 LKEFKHTRYDLACCSSSTLTESVMLIAVADVLIDAASVLGGDATLKILYIKFVEGVACCG 461
++F+ R D ++D L+ +LG + L LY K +
Sbjct: 417 KEQFRIYRVD-----------------ISDTLMYVYEMLGAE-LLSNLYDKLGRLLTSSE 458
Query: 462 NKHNEWRPAEAALFCIRAISTYVSVVEAEVMPQVMALLPKLP-QQPQLLQTVCLTIGAYS 520
++ W+ EA L+ ++I+ + V ++V+P ++ L+P++ QL TV TIGA S
Sbjct: 459 EPYS-WQHTEALLYGFQSIAETIDVNYSDVVPGLIGLIPRISISNVQLADTVMFTIGALS 517
Query: 521 KWFDAASSDPSILASVLSILTSGMSTSEDTAAAAALAFRHICDDCRKKLCGYLDGLYNVY 580
+W + P ++ SVL ++ + E + ++ + + IC +C+ L Y + V
Sbjct: 518 EWL---ADHPVMINSVLPLVLHALGNPELSISSVS-TLKKICRECKYDLPPYAANIVAVS 573
Query: 581 RTAVNGEGSLKVSAEDSLHLVEALSMVITELPQVDAKKALEMLCLPVVTPLQEIINQGP 639
+ + + + L++AL +++ L + K L L P + L+++ + P
Sbjct: 574 QDVLMKQIH---KTSQCMWLMQALGFLLSALQVEEILKNLHSLISPYIQQLEKLAEEIP 629
>sp|Q8K0C1|IPO13_MOUSE Importin-13 OS=Mus musculus GN=Ipo13 PE=2 SV=1
Length = 963
Score = 116 bits (291), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 154/659 (23%), Positives = 297/659 (45%), Gaps = 79/659 (11%)
Query: 6 TVKEALNALYHHPDDAVRMQADRWLQDFQHTIDAWQVADNLLH-DATSNLETLIFCSQTL 64
V++AL+ LY+ P+ + A +WL Q + AW + LL D ++ F + L
Sbjct: 25 NVEKALHQLYYDPNIDNKNLAQKWLMQAQVSPQAWHFSWQLLQPDKVPEIQ--YFGASAL 82
Query: 65 RSKVQRDVEELPSEAVRGLQDSLNTLLKKFHKGPPKVRTQISIAVAALAVHISAEDW--G 122
K+ R ++P++ L+ L T + +F G V T++ +A+A+LA+ + + W
Sbjct: 83 HIKISRYWSDIPTDQYESLKAQLFTQITRFASGSKIVLTRLCVALASLALSMMPDAWPCA 142
Query: 123 GGGIVNWLRDEMNSHPEFVPG----FLELLTVLPEEVFNYKIAARPERRRQFEK-ELTSQ 177
+V + E P G LELLTVLPEE ++ + P+ R+ + L +
Sbjct: 143 VADMVRLFQAE--DSPVDSQGRCLALLELLTVLPEE---FQTSRLPQYRKGLVRTSLAVE 197
Query: 178 MEVALSTLTACLHINE----LKEQVLEAFASWLRLKHRIPGSVLASHPLVLTALSSLHSE 233
L L ++++VL+ F+SW++L+ +P + L+ A ++L
Sbjct: 198 CGTVFPLLEQLLQQPSSPSCVRQKVLKCFSSWVQLE--VP--LQDCEALIQAAFAALQDS 253
Query: 234 ILSEASVNVISELIHYSAAGSSGGATVNMPLIQVIVPQIMSLKAHLTDS--SKDEEDVKA 291
L ++SV I I S A + + ++P ++ L+ L + + D E
Sbjct: 254 ELFDSSVEAIVNAI------SQPDAQRYVNTLLKLIPLVLGLQEQLRQAVQNGDMETSHG 307
Query: 292 IARLFADMGDSYVELIATGSD--ESML-IVHALLEVASHPEY-----DIASMTFNFWHSL 343
I R+ +G+++ + + +S L +V+ ++ P + +S+T FW++L
Sbjct: 308 ICRIAVALGENHSRALLDQVEHWQSFLALVNMIMFCTGIPGHYPVNETTSSLTLTFWYTL 367
Query: 344 QVILTKRDSYISFGNEASAEAERSRRLQVFRSAYESLVSLVSFRVQYPQD--YQDLSLED 401
Q D +SF E A + QV+R Y LV ++ + Q+P D Y S ++
Sbjct: 368 Q------DDILSFEAEKQAVYQ-----QVYRPVYFQLVDVLLHKAQFPSDEEYGFWSSDE 416
Query: 402 LKEFKHTRYDLACCSSSTLTESVMLIAVADVLIDAASVLGGDATLKILYIKFVEGVACCG 461
++F+ R D ++D L+ +LG + L LY K +
Sbjct: 417 KEQFRIYRVD-----------------ISDTLMYVYEMLGAE-LLSNLYDKLGRLLTSSE 458
Query: 462 NKHNEWRPAEAALFCIRAISTYVSVVEAEVMPQVMALLPKLP-QQPQLLQTVCLTIGAYS 520
++ W+ EA L+ ++I+ + V ++V+P ++ L+P++ QL TV TIGA S
Sbjct: 459 EPYS-WQHTEALLYGFQSIAETIDVNYSDVVPGLIGLIPRISISNVQLADTVMFTIGALS 517
Query: 521 KWFDAASSDPSILASVLSILTSGMSTSEDTAAAAALAFRHICDDCRKKLCGYLDGLYNVY 580
+W + P ++ SVL ++ + E + ++ + + IC +C+ L Y + V
Sbjct: 518 EWL---ADHPVMINSVLPLVLHALGNPELSVSSVS-TLKKICRECKYDLPPYAANIVAVS 573
Query: 581 RTAVNGEGSLKVSAEDSLHLVEALSMVITELPQVDAKKALEMLCLPVVTPLQEIINQGP 639
+ + + + L++AL +++ L + K L L P + L+++ + P
Sbjct: 574 QDVLMKQIH---KTSQCMWLMQALGFLLSALQVEEILKNLHSLISPYIQQLEKLAEEIP 629
>sp|O94829|IPO13_HUMAN Importin-13 OS=Homo sapiens GN=IPO13 PE=1 SV=3
Length = 963
Score = 116 bits (291), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 154/661 (23%), Positives = 298/661 (45%), Gaps = 83/661 (12%)
Query: 6 TVKEALNALYHHPDDAVRMQADRWLQDFQHTIDAWQVADNLLH-DATSNLETLIFCSQTL 64
V++AL+ LY+ P+ + A +WL Q + AW + LL D ++ F + L
Sbjct: 25 NVEKALHQLYYDPNIENKNLAQKWLMQAQVSPQAWHFSWQLLQPDKVPEIQ--YFGASAL 82
Query: 65 RSKVQRDVEELPSEAVRGLQDSLNTLLKKFHKGPPKVRTQISIAVAALAVHISAEDW--G 122
K+ R ++P++ L+ L T + +F G V T++ +A+A+LA+ + + W
Sbjct: 83 HIKISRYWSDIPTDQYESLKAQLFTQITRFASGSKIVLTRLCVALASLALSMMPDAWPCA 142
Query: 123 GGGIVNWLRDEMNSHPEFVPG------FLELLTVLPEEVFNYKIAARPERRRQFEK-ELT 175
+V + E + V G LELLTVLPEE ++ + P+ R+ + L
Sbjct: 143 VADMVRLFQAEDSP----VDGQGRCLALLELLTVLPEE---FQTSRLPQYRKGLVRTSLA 195
Query: 176 SQMEVALSTLTACLHINE----LKEQVLEAFASWLRLKHRIPGSVLASHPLVLTALSSLH 231
+ L L ++++VL+ F+SW++L+ +P + L+ A ++L
Sbjct: 196 VECGAVFPLLEQLLQQPSSPSCVRQKVLKCFSSWVQLE--VP--LQDCEALIQAAFAALQ 251
Query: 232 SEILSEASVNVISELIHYSAAGSSGGATVNMPLIQVIVPQIMSLKAHLTDS--SKDEEDV 289
L ++SV I I S A + + ++P ++ L+ L + + D E
Sbjct: 252 DSELFDSSVEAIVNAI------SQPDAQRYVNTLLKLIPLVLGLQEQLRQAVQNGDMETS 305
Query: 290 KAIARLFADMGDSYVELIATGSD--ESML-IVHALLEVASHPEY-----DIASMTFNFWH 341
I R+ +G+++ + + +S L +V+ ++ P + +S+T FW+
Sbjct: 306 HGICRIAVALGENHSRALLDQVEHWQSFLALVNMIMFCTGIPGHYPVNETTSSLTLTFWY 365
Query: 342 SLQVILTKRDSYISFGNEASAEAERSRRLQVFRSAYESLVSLVSFRVQYPQD--YQDLSL 399
+LQ D +SF E A + QV+R Y LV ++ + Q+P D Y S
Sbjct: 366 TLQ------DDILSFEAEKQAVYQ-----QVYRPVYFQLVDVLLHKAQFPSDEEYGFWSS 414
Query: 400 EDLKEFKHTRYDLACCSSSTLTESVMLIAVADVLIDAASVLGGDATLKILYIKFVEGVAC 459
++ ++F+ R D ++D L+ +LG + L LY K +
Sbjct: 415 DEKEQFRIYRVD-----------------ISDTLMYVYEMLGAE-LLSNLYDKLGRLLTS 456
Query: 460 CGNKHNEWRPAEAALFCIRAISTYVSVVEAEVMPQVMALLPKLP-QQPQLLQTVCLTIGA 518
++ W+ EA L+ ++I+ + V ++V+P ++ L+P++ QL TV TIGA
Sbjct: 457 SEEPYS-WQHTEALLYGFQSIAETIDVNYSDVVPGLIGLIPRISISNVQLADTVMFTIGA 515
Query: 519 YSKWFDAASSDPSILASVLSILTSGMSTSEDTAAAAALAFRHICDDCRKKLCGYLDGLYN 578
S+W + P ++ SVL ++ + E + ++ + + IC +C+ L Y +
Sbjct: 516 LSEWL---ADHPVMINSVLPLVLHALGNPELSVSSVS-TLKKICRECKYDLPPYAANIVA 571
Query: 579 VYRTAVNGEGSLKVSAEDSLHLVEALSMVITELPQVDAKKALEMLCLPVVTPLQEIINQG 638
V + + + + L++AL +++ L + K L L P + L+++ +
Sbjct: 572 VSQDVLMKQIH---KTSQCMWLMQALGFLLSALQVEEILKNLHSLISPYIQQLEKLAEEI 628
Query: 639 P 639
P
Sbjct: 629 P 629
>sp|Q5R974|IPO13_PONAB Importin-13 OS=Pongo abelii GN=IPO13 PE=2 SV=1
Length = 963
Score = 115 bits (289), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 152/658 (23%), Positives = 296/658 (44%), Gaps = 77/658 (11%)
Query: 6 TVKEALNALYHHPDDAVRMQADRWLQDFQHTIDAWQVADNLLH-DATSNLETLIFCSQTL 64
+V++AL+ LY+ P+ + A +WL Q + AW + LL D ++ F + L
Sbjct: 25 SVEKALHQLYYDPNIENKNLAQKWLMQAQVSPQAWHFSWQLLQPDKVPEIQ--YFGASAL 82
Query: 65 RSKVQRDVEELPSEAVRGLQDSLNTLLKKFHKGPPKVRTQISIAVAALAVHISAEDWGGG 124
K R ++P++ L+ L T + +F G V T++ +A+A+LA+ + + W
Sbjct: 83 PIKTSRYWSDIPTDQYESLKAQLFTQITRFASGSKIVLTRLCVALASLALSMMPDAW-PC 141
Query: 125 GIVNWLR-DEMNSHPEFVPG----FLELLTVLPEEVFNYKIAARPERRRQFEK-ELTSQM 178
+ + +R + P G LELLTVLPEE ++ + P+ R+ + L +
Sbjct: 142 AVADMVRLFQAEDSPVDGQGRCLALLELLTVLPEE---FQTSRLPQYRKGLVRTSLAVEC 198
Query: 179 EVALSTLTACLHINE----LKEQVLEAFASWLRLKHRIPGSVLASHPLVLTALSSLHSEI 234
L L ++++VL+ F+SW++L+ +P + L+ A ++L
Sbjct: 199 GAVFPLLEQLLQQPSSPSCVRQKVLKCFSSWVQLE--VP--LQDCEALIQAAFAALQDSE 254
Query: 235 LSEASVNVISELIHYSAAGSSGGATVNMPLIQVIVPQIMSLKAHLTDS--SKDEEDVKAI 292
L ++SV I I A + + +P ++ L+ L + + D E I
Sbjct: 255 LFDSSVEAIVNAISQPDAQRCVNTLLKL------IPLVLGLQEQLRQAVQNGDMETSHGI 308
Query: 293 ARLFADMGDSYVELIATGSD--ESML-IVHALLEVASHPEY-----DIASMTFNFWHSLQ 344
R+ +G+++ + + +S L +V+ ++ P + +S+T FW++LQ
Sbjct: 309 CRIAVALGENHSRALLDQVEHWQSFLALVNMIMFCTGIPGHYPVNETTSSLTLTFWYTLQ 368
Query: 345 VILTKRDSYISFGNEASAEAERSRRLQVFRSAYESLVSLVSFRVQYPQD--YQDLSLEDL 402
D +SF E A + QV+R Y LV ++ + Q+P D Y S ++
Sbjct: 369 ------DDILSFEAEKQAVYQ-----QVYRPVYFQLVDVLLHKAQFPSDEEYGFWSSDEK 417
Query: 403 KEFKHTRYDLACCSSSTLTESVMLIAVADVLIDAASVLGGDATLKILYIKFVEGVACCGN 462
++F+ R D ++D L+ +LG + L LY K +
Sbjct: 418 EQFRIYRVD-----------------ISDTLMYVYEMLGAE-LLSNLYDKLGRLLTSSEE 459
Query: 463 KHNEWRPAEAALFCIRAISTYVSVVEAEVMPQVMALLPKLP-QQPQLLQTVCLTIGAYSK 521
++ W+ EA L+ ++I+ + V ++V+P ++ L+P++ QL TV TIGA S+
Sbjct: 460 PYS-WQHTEALLYGFQSIAETIDVNYSDVVPGLIGLIPRISISNVQLADTVMFTIGALSE 518
Query: 522 WFDAASSDPSILASVLSILTSGMSTSEDTAAAAALAFRHICDDCRKKLCGYLDGLYNVYR 581
W + P ++ SVL ++ + E + ++ + + IC +C+ L Y + V +
Sbjct: 519 WL---ADHPVMINSVLPLVLHALGNPEPSVSSVS-TLKKICRECKYDLPPYAANIVAVSQ 574
Query: 582 TAVNGEGSLKVSAEDSLHLVEALSMVITELPQVDAKKALEMLCLPVVTPLQEIINQGP 639
+ + + L++AL +++ L + K L L P + L+++ + P
Sbjct: 575 DVLMKQIH---KTSQCMWLMQALGFLLSALQVEEILKNLHSLISPYIQQLEKLAEEIP 629
>sp|Q9JM04|IPO13_RAT Importin-13 OS=Rattus norvegicus GN=Ipo13 PE=2 SV=1
Length = 963
Score = 110 bits (276), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 151/659 (22%), Positives = 298/659 (45%), Gaps = 77/659 (11%)
Query: 6 TVKEALNALYHHPDDAVRMQADRWLQDFQHTIDAWQVADNLLH-DATSNLETLIFCSQTL 64
V++AL+ LY+ P+ + A +WL Q + AW + LL D ++ F + L
Sbjct: 25 NVEKALHQLYYDPNIENKNLAQKWLMQAQVSPQAWHFSWQLLQPDKVPEIQ--YFGASAL 82
Query: 65 RSKVQRDVEELPSEAVRGLQDSLNTLLKKFHKGPPKVRTQISIAVAALAVHISAEDWGGG 124
K+ R ++P++ L+ T + +F G V T++ +A+A+LA+ + + W
Sbjct: 83 HIKISRYWSDIPTDQYESLKAHSFTQITRFASGSKIVLTRLCVALASLALSMMPDAW-PC 141
Query: 125 GIVNWLR-DEMNSHPEFVPG----FLELLTVLPEEVFNYKIAARPERRRQFEK-ELTSQM 178
+ + +R + P G LELLTVLPEE ++ + P+ R+ + L +
Sbjct: 142 AVADMVRLFQAEDSPVDSQGRCLALLELLTVLPEE---FQTSRLPQYRKGLVRASLAVEC 198
Query: 179 EVALSTLTACLHINE----LKEQVLEAFASWLRLKHRIPGSVLASHPLVLTALSSLHSEI 234
L L ++++VL+ F+SW++L+ +P + L+ A ++L
Sbjct: 199 GAVFPLLEQLLQQPSSPSCVRQKVLKCFSSWVQLE--VP--LQDCEALIQAAFAALQDSE 254
Query: 235 LSEASVNVISELIHYSAAGSSGGATVNMPLIQVIVPQIMSLKAHLTDS--SKDEEDVKAI 292
L ++SV I I S A + + ++P ++ L+ L + + D E I
Sbjct: 255 LFDSSVEAIVNAI------SQPDAQRYVNTLLKLIPLVLGLQEQLRQAVQNGDMETSHGI 308
Query: 293 ARLFADMGDSYVELIATGSD--ESML-IVHALLEVASHPEY-----DIASMTFNFWHSLQ 344
R+ +G+++ + + +S L +V+ ++ P + +S+T FW++LQ
Sbjct: 309 CRIAVALGENHSRALLDQVEHWQSFLALVNMIMFCTGIPGHYPVNETTSSLTLTFWYTLQ 368
Query: 345 VILTKRDSYISFGNEASAEAERSRRLQVFRSAYESLVSLVSFRVQYPQD--YQDLSLEDL 402
D +SF E A + QV+R Y LV ++ + Q+P D Y S ++
Sbjct: 369 ------DDILSFEAEKQAVYQ-----QVYRPVYFQLVDVLLHKAQFPSDEEYGFWSSDEK 417
Query: 403 KEFKHTRYDLACCSSSTLTESVMLIAVADVLIDAASVLGGDATLKILYIKFVEGVACCGN 462
++F+ R D ++D L+ +LG + L LY K +
Sbjct: 418 EQFRIYRVD-----------------ISDTLMYVYEMLGAE-LLSNLYDKLGRLLTSSEE 459
Query: 463 KHNEWRPAEAALFCIRAISTYVSVVEAEVMPQVMALLPKLP-QQPQLLQTVCLTIGAYSK 521
++ W+ EA L+ ++I+ + V ++V+P ++ L+P++ QL TV TIGA S+
Sbjct: 460 PYS-WQHTEALLYGFQSIAETIDVNYSDVVPGLIGLIPRISISNVQLADTVMFTIGALSE 518
Query: 522 WFDAASSDPSILASVLSILTSGMSTSEDTAAAAALAFRHICDDCRKKLCGYLDGLYNVYR 581
W + P ++ SVL ++ + E + ++ + + IC +C+ +L Y + V +
Sbjct: 519 WL---ADHPVMINSVLPLVLHALGNPELSVSSVS-TLKKICRECKYELPPYAANIVAVSQ 574
Query: 582 TAVNGEGSLKVSAEDSLHLVEALSMVITELPQVDAKKALEMLCLPVVTPLQEIINQGPE 640
+ + + L++AL +++ L + K L L + L+++ + P+
Sbjct: 575 DVLMKQIH---KTSQCMWLMQALGFLLSALQVEENLKNLHSLISTYIQQLEKLAEEIPK 630
>sp|Q5ZIC8|IPO13_CHICK Importin-13 OS=Gallus gallus GN=IPO13 PE=2 SV=1
Length = 958
Score = 109 bits (273), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 159/663 (23%), Positives = 300/663 (45%), Gaps = 87/663 (13%)
Query: 6 TVKEALNALYHHPDDAVRMQADRWLQDFQHTIDAWQVADNLLH-DATSNLETLIFCSQTL 64
V++AL+ LY+ P+ + A +WL Q + AW + LL+ D ++ T
Sbjct: 20 NVEKALHQLYYDPNIENKNLAQKWLMQAQVSPQAWHFSWLLLNMDKVPEIQYSAPAPCTS 79
Query: 65 RSKVQRDVEELPSEAVRGLQDSLNTLLKKFHKGPPKVRTQISIAVAALAVHISAEDW--G 122
RS LP + L+ L T + +F G V T++ +A+A+LA+ + E W
Sbjct: 80 RSPA-TGTTSLPDQ-YESLKSQLFTHITRFAGGSKIVLTRLCVALASLALSMMPEAWPCA 137
Query: 123 GGGIVNWLRDEMNSHPEFVPG------FLELLTVLPEEVFNYKIAARPERRRQ-----FE 171
+V + E ++ V G LELLTVLPEE ++ + P+ R+
Sbjct: 138 VADMVRMFQAEDSN----VDGRARCLALLELLTVLPEE---FQTSRLPQYRKGQVRSVLA 190
Query: 172 KELTSQMEVALSTLTACLHINELKEQVLEAFASWLRLKHRIPGSVLASHPLVLTALSSLH 231
+E S + L +K++VL+ F+SW++L+ IP ++ L+ A +SL
Sbjct: 191 QECGSVFPLLEQLLQQQDSPGFIKQKVLKCFSSWVQLE--IP--LMDCENLIQAAFTSLQ 246
Query: 232 SEILSEASVNVISELIHYSAAGSSGGATVNMPLIQVIVPQIMSLKAHLTDS--SKDEEDV 289
L + +V + I S A + + ++P ++ L+ L + S D E
Sbjct: 247 DPELFDTAVEAVVNAI------SQPDAQRYVNTLLKLIPPVLGLQEQLRQAVQSGDMETS 300
Query: 290 KAIARLFADMGDSYVELIATGSD--ESML-IVHALLEVASHPEY-----DIASMTFNFWH 341
I R+ +G+++ + + +S L +V+ ++ P + +S+T FW+
Sbjct: 301 HGICRIAVALGENHSRALLDQVEHWQSFLALVNMIMFCTGIPGHYPVNETTSSLTLTFWY 360
Query: 342 SLQVILTKRDSYISFGNEASAEAERSRRLQVFRSAYESLVSLVSFRVQYPQD--YQDLSL 399
+LQ D +SF + A + QV+R Y LV ++ + Q+P D Y S
Sbjct: 361 TLQ------DDILSFEPDKQAVYQ-----QVYRPVYFQLVDVLLHKAQFPSDEEYGFWSS 409
Query: 400 EDLKEFKHTRYDLACCSSSTLTESVMLIAVADVLIDAASVLGGDATLKILYIKFVEGVAC 459
++ ++F+ R D ++D L+ +LG + L LY K +
Sbjct: 410 DEKEQFRIYRVD-----------------ISDTLMYVYEMLGAE-LLSSLYDKLGR-LLT 450
Query: 460 CGNKHNEWRPAEAALFCIRAISTYVSVVEAEVMPQVMALLPKLP-QQPQLLQTVCLTIGA 518
+ + W+ EA L+ ++I+ + V ++V+P ++ L+P++ QL TV TIGA
Sbjct: 451 NTEQPSTWQHTEALLYGFQSIAETIDVNYSDVVPGLIGLIPRISISNVQLADTVMFTIGA 510
Query: 519 YSKWFDAASSDPSILASVLSILTSGMSTSEDTAAAAALAFRHICDDCRKKLCGYLDGLYN 578
S+W + P ++ +VL ++ + E + ++ + + IC +C+ L Y +
Sbjct: 511 LSEWL---ADHPVMINNVLPLVLQALGNPELSISSVS-TLKKICRECKYDLPPYAANI-- 564
Query: 579 VYRTAVNGEGSLKVSAEDS--LHLVEALSMVITELPQVDAKKALEMLCLPVVTPLQEIIN 636
AV+ E +K + S + L++AL +++ L + K L L P + L+++ +
Sbjct: 565 ---VAVSQEVLMKQIHKTSQCMWLMQALGFLLSALQVEEILKNLHSLITPYIQQLEKLAD 621
Query: 637 QGP 639
+ P
Sbjct: 622 ETP 624
>sp|Q54C85|IP13A_DICDI Importin-13 homolog A OS=Dictyostelium discoideum GN=ipo13A PE=3
SV=1
Length = 1064
Score = 63.9 bits (154), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 115/564 (20%), Positives = 237/564 (42%), Gaps = 85/564 (15%)
Query: 7 VKEALNALY--HHPDDAVRMQADRWLQDFQHTIDAWQVADNLLHDATSNL-ETLIFCSQT 63
V+ L +LY + D + Q +WL FQ + +W +A LL SN+ E F + T
Sbjct: 23 VETVLKSLYFPQNNDYSALPQIQQWLIQFQKSFSSWSIAPLLL---MSNIKEIQYFGAST 79
Query: 64 LRSKVQRDVEELPSEAVRGLQDSLNTLLK-KFHKGPPKVRTQISIAVAALAVHISAEDWG 122
+ +K++ + L + + D+L LK + K V T++ +AV+ +A H + + W
Sbjct: 80 IENKIKNNWLSLSQDMKKEFLDNLLLFLKTQITKCSTVVITRLCLAVSVIACHSTTDLWA 139
Query: 123 GGGIVNWLR---DEMNS----HPEFVPGFLELLTVLPEEVFNYKIAARPERRR---QFEK 172
I++ L+ ++N+ +P V LELLT+ PEE+ N + +R + QF K
Sbjct: 140 NP-ILDVLQLSFQDINNLDCFNPNLVNLTLELLTIFPEELTNADYITQEKRNKVGLQFNK 198
Query: 173 ELTSQMEVALSTLTACLHINEL--KEQVLEAFASWLRLKHRIPGSVLASHPLVLTALSSL 230
+ E+ ++ + L + L+ F SW+ P L L+L ++
Sbjct: 199 HNSKVFEILCKIMSLPQNQQTLIFMKSSLKCFKSWILFDCS-PREYLIDSDLILKCFEAV 257
Query: 231 -HSEILSEASVNVISELIHYSAA----GSSGGATVNMPLIQVIVPQIMSLKAHLTDSSKD 285
++ L E + V+ E+ + + ++ + I +I P L ++
Sbjct: 258 SNNPKLVEDFLMVLDEMFTFMGGKIFRSYTSAFSLVLSRILMIFPSFYILALQ-----EE 312
Query: 286 EEDVKAIARLFADMGDSYVELIATGSDESMLIVHALLEVASHPEYDIASMTFNFWHSLQV 345
+ I LF+ + +++++ + + S AL+++A +++ + L
Sbjct: 313 NQIFNQIFLLFSHIAENHIKTLLKNPELSNNFFKALIQMALKGDFETCEL-------LSP 365
Query: 346 ILTKRDSYISFGNEASAEAERSRRLQVFRSA-----------YESLVSLVS-FRVQ--YP 391
++T+ + + +S + + + Y+ L +V FR++ YP
Sbjct: 366 VITEIAALHELHSTSSTTEATTTTIATTTTPTTTSDCDISGWYQYLGEMVEVFRLKSMYP 425
Query: 392 --QDYQDLSLEDLKEFKHTRYDLACCSSSTLTESVMLIAVADVLIDAASVLGGDATLKIL 449
+D DL ED ++F R + D +++ ++L G ++L
Sbjct: 426 LDKDISDLYEEDAEKFFAFR-----------------VIAGDSVLEVYNILEGKILQQLL 468
Query: 450 Y-----IKFVEGVACCGNKHNEWRPAEAALFCIRAISTYVSVVEAEVMPQVMALLPKLP- 503
I+ C W+ EA ++ + +S ++ + E +PQ+ ++L +LP
Sbjct: 469 NSLWSDIQSFPTTKC-------WQSIEATIYLLSCLSESIT-EDTEFVPQLFSILGQLPI 520
Query: 504 QQPQLLQTVCLTIGAYSKWFDAAS 527
Q L+++ G YS D ++
Sbjct: 521 QSTPLIKSTMTLAGNYSNLIDKST 544
>sp|Q54WT9|IP13B_DICDI Importin-13 homolog B OS=Dictyostelium discoideum GN=ipo13B PE=3
SV=1
Length = 1119
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 106/234 (45%), Gaps = 22/234 (9%)
Query: 5 NTVKEALNALYHHPDDAVRMQADRWLQDFQHTIDAWQVADNLLHDATSNLETLIFCSQTL 64
+ + AL+ LY D R A++WL FQ AW+ LL + T+ E F + TL
Sbjct: 73 DVLTHALHTLYKSNDSNQRKLAEKWLILFQKQPIAWEFCPRLLLE-TNIFELQYFGASTL 131
Query: 65 RSKVQRDVEELPSEAVRGLQDSLNTLLKKFHKGPPKVRTQISIAVAALAVHISAEDWGGG 124
SK++ + E E + +++ ++++ K P T++S+ + ++ E W
Sbjct: 132 ESKLKNEWNECNVEMKSKILNTIVSIIQNSTKLPICCVTRVSVTLTIAVMYTFPEIWRNA 191
Query: 125 --GIVNW-LRDEMNSHPEFVPG-----------FLELLTVLPEEVFNYKIAARPERRRQF 170
I++ ++ ++N+ P LE L++LP+E+ +A + +
Sbjct: 192 IFDIIHLSIKQDINTLSLHDPSQNHFNTDRLLMVLEFLSILPDELKKQDLALC--KYSEI 249
Query: 171 EKELTSQMEVALSTLTACLH--INELKEQV---LEAFASWLRLKHRIPGSVLAS 219
+KEL ++ L + L INE E + +A ++WL+ G++L S
Sbjct: 250 QKELKLIIDKIYKFLLSVLFLPINENFEFIKISYKALSAWLKYMLPSNGTMLQS 303
Score = 34.3 bits (77), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 62/133 (46%), Gaps = 9/133 (6%)
Query: 442 GDATLKILYIKF-VEGV-ACCGNKHNEWRPAEAALFCIRAISTYVSVVEAEVMPQVMALL 499
D K ++KF +E + A K W E+ L+ I A S + E +P ++ ++
Sbjct: 539 NDIIPKSTFLKFLIEKLNAFINEKCPHWEQYESILYYIYAFSGGSQDGQLEYVPILLNII 598
Query: 500 PKLP-QQPQLLQTVCLTIGAYSKWFDAASSDPSILASVLSILTSGMSTSEDTAAAAALAF 558
P +P + L++T IG YS + ++ LA V+S L +S +E +AA+ +
Sbjct: 599 PLIPIKSIPLVRTSIKLIGRYSSFL---KTNTDYLAKVVSDLLPALSHAELIGSAAS-SL 654
Query: 559 RHIC--DDCRKKL 569
IC D C L
Sbjct: 655 LSICVSDKCSTML 667
>sp|A1A3N3|SYM_BIFAA Methionine--tRNA ligase OS=Bifidobacterium adolescentis (strain
ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) GN=metG
PE=3 SV=1
Length = 620
Score = 38.1 bits (87), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 74/170 (43%), Gaps = 22/170 (12%)
Query: 229 SLHSEILSEASVNVISELIHYSAAGSSGGAT-----VNMPLIQVIVPQIMSLKAHLTDSS 283
+ HS+I SE++ Y+ GS GG T +NMP QV+ + M+++ SS
Sbjct: 300 TFHSQIWP-------SEMLAYNGQGSKGGETGKLGPLNMPE-QVVASEFMTMEGKKFSSS 351
Query: 284 KD----EEDVKAIARLFADMGDSYVELIATGSDESMLIVHALLEVASHPEYDIASMTFNF 339
+ +D+ +AR D Y+ + S +S E H ++A+ N
Sbjct: 352 RGIVIYVKDI--LARYPVDAVRYYISVAGPESSDSDF---TWAEFVRHNNEELAASWGNL 406
Query: 340 WHSLQVILTKRDSYISFGNEASAEAERSRRLQVFRSAYESLVSLVSFRVQ 389
+ + ++ K I +EASA E L ++A+E++ L+ Q
Sbjct: 407 VNRVANLINKNFGEIPAFDEASATDEDRALLAETKAAFETVGGLIENHRQ 456
>sp|Q9Z275|RLBP1_MOUSE Retinaldehyde-binding protein 1 OS=Mus musculus GN=Rlbp1 PE=2 SV=3
Length = 317
Score = 37.4 bits (85), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Query: 366 RSRRLQVFRSAYESLVSLVSFRVQYPQDYQDLSLEDLKEFKHTRYDLACCSSSTLTESVM 425
R+R+ V R AYE L V+FR+QYP+ + LS+E L+ Y S VM
Sbjct: 101 RARKFDVGR-AYELLKGYVNFRLQYPELFDSLSMEALRCTIEAGYPGVLSSRDKYGRVVM 159
Query: 426 LIAVAD 431
L + +
Sbjct: 160 LFNIEN 165
>sp|A5GJD1|PURA_SYNPW Adenylosuccinate synthetase OS=Synechococcus sp. (strain WH7803)
GN=purA PE=3 SV=1
Length = 437
Score = 34.3 bits (77), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 8/57 (14%)
Query: 560 HICD--------DCRKKLCGYLDGLYNVYRTAVNGEGSLKVSAEDSLHLVEALSMVI 608
H+CD R++ CG+ DG+ Y VNG L V+ D L ++AL + +
Sbjct: 288 HLCDRGGEFGTTTGRRRRCGWFDGVIGRYAVEVNGLDCLAVTKLDVLDEIDALQVCV 344
>sp|Q55CQ7|TNPO_DICDI Transportin OS=Dictyostelium discoideum GN=tnpo PE=3 SV=1
Length = 931
Score = 33.9 bits (76), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 62/146 (42%), Gaps = 7/146 (4%)
Query: 462 NKHNEWRPAEAALFCIRAISTYVSVVEAEVMPQVMALLPKLPQQPQLL--QTVCLTIGAY 519
N+ N W E+A+ + AI+ A + +V+ L P+ L C T+ Y
Sbjct: 440 NEQNPWPVRESAILALGAIADGSKNGLAPHLSKVIPYLINTLNDPKPLVRSITCWTLSRY 499
Query: 520 SKWFDAASSDPSILASVLSILTSGMSTSEDTAAAAALAFRHICDDCRKKLCGYLDGLYNV 579
S W A + V+++L + ++ AA AF + ++ L YL +
Sbjct: 500 SYWIAQADGRDYLHPLVVNLLNRIVDNNKKVQEAACSAFATLEEEADLLLIPYLQM---I 556
Query: 580 YRTAVNGEGSLKVSAEDSLHLVEALS 605
T VN G K A++ L L +A+S
Sbjct: 557 LVTFVNAFG--KYQAKNLLILYDAIS 580
>sp|A3QGM9|RLMM_SHELP Ribosomal RNA large subunit methyltransferase M OS=Shewanella
loihica (strain ATCC BAA-1088 / PV-4) GN=rlmM PE=3 SV=1
Length = 363
Score = 33.5 bits (75), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 16/68 (23%), Positives = 31/68 (45%)
Query: 587 EGSLKVSAEDSLHLVEALSMVITELPQVDAKKALEMLCLPVVTPLQEIINQGPEILQKKH 646
EG D+L V + E P + K L C + PL++ + + +L+K++
Sbjct: 82 EGDRVTPIVDALAKVHRAGELRVETPDTNEAKELSTFCRKLTVPLRQALKRSGALLEKEN 141
Query: 647 PRDLTVHI 654
P+ +H+
Sbjct: 142 PKRPIIHV 149
>sp|Q5ZLT0|XPO7_CHICK Exportin-7 OS=Gallus gallus GN=XPO7 PE=2 SV=1
Length = 1087
Score = 33.1 bits (74), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 55/121 (45%), Gaps = 11/121 (9%)
Query: 2 ELQNTVKEALNALYHHPDDAVRMQADRWLQDFQHTIDAWQVADNLLHDATSNLETLIFCS 61
+L+N K+ LY D A R+QA++ L +F ++ D LL +S+ L+ +
Sbjct: 10 QLENLCKQ----LYETTDTATRLQAEKALVEFTNSPDCLSKCQLLLERGSSSYSQLL-AA 64
Query: 62 QTLRSKVQRDVEELPSEAVRGLQDS-LNTLLKKFHKGPPKVRTQISIAVAALAVHISAED 120
L V R LP E +++ LN L + PK+ T ++ A+ L I+
Sbjct: 65 TCLTKLVSRTNNPLPLEQRIDIRNYVLNYLATR-----PKLATFVTQALIQLYARITKLG 119
Query: 121 W 121
W
Sbjct: 120 W 120
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.132 0.386
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 241,714,492
Number of Sequences: 539616
Number of extensions: 9470397
Number of successful extensions: 27776
Number of sequences better than 100.0: 23
Number of HSP's better than 100.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 27696
Number of HSP's gapped (non-prelim): 31
length of query: 707
length of database: 191,569,459
effective HSP length: 125
effective length of query: 582
effective length of database: 124,117,459
effective search space: 72236361138
effective search space used: 72236361138
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 65 (29.6 bits)