BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005233
(707 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2AXN|A Chain A, Crystal Structure Of The Human Inducible Form 6-
Phosphofructo-2-KinaseFRUCTOSE-2,6-Bisphosphatase
pdb|2DWO|A Chain A, Pfkfb3 In Complex With Adp And Pep
pdb|2DWP|A Chain A, A Pseudo Substrate Complex Of 6-Phosphofructo-2-Kinase Of
Pfkfb
pdb|2I1V|B Chain B, Crystal Structure Of Pfkfb3 In Complex With Adp And
Fructose-2,6-Bisphosphate
pdb|3QPU|A Chain A, Pfkfb3 In Complex With Ppi
pdb|3QPV|A Chain A, Pfkfb3 Trapped In A Phospho-Enzyme Intermediate State
pdb|3QPW|A Chain A, Pfkfb3 In Complex With Aluminum Tetrafluoride
Length = 520
Score = 328 bits (840), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 177/373 (47%), Positives = 246/373 (65%), Gaps = 20/373 (5%)
Query: 344 LGPK-EHRHLAIVLVGLPARGKTFTAAKLTRYLRWLGHDTKHFNVGKYRRLKHGVNQSAD 402
GPK + IV+VGLPARGKT+ + KLTRYL W+G TK FNVG+YRR S +
Sbjct: 27 CGPKLTNSPTVIVMVGLPARGKTYISKKLTRYLNWIGVPTKVFNVGEYRREAVKQYSSYN 86
Query: 403 FFRADNPEGMEARNEVAALAMEDMISWM-HEGGQVGIFDATNSSRKRRNMLMKMA-EGNC 460
FFR DN E M+ R + A A+ D+ S++ EGGQ+ +FDATN++R+RR+M++ A E +
Sbjct: 87 FFRPDNEEAMKVRKQCALAALRDVKSYLAKEGGQIAVFDATNTTRERRHMILHFAKENDF 146
Query: 461 KIIFLETICNDRDIIERNIRLKIQQSPDYAEEPDFEAGLQDFKNRLANYEKVYEPVD--- 517
K F+E++C+D ++ NI SPDY + EA + DF R++ YE Y+P+D
Sbjct: 147 KAFFIESVCDDPTVVASNIMEVKISSPDYKDCNSAEA-MDDFMKRISCYEASYQPLDPDK 205
Query: 518 ---EGSYIKMIDMVSGHGGQIQVNNISGYLPGRIVFFLVNTHLTPRPILLTRHGESRDNV 574
+ S IK+ID+ G + VN + ++ RIV++L+N H+ PR I L RHGE+ N+
Sbjct: 206 CDRDLSLIKVIDV----GRRFLVNRVQDHIQSRIVYYLMNIHVQPRTIYLCRHGENEHNL 261
Query: 575 RGRIGGDTILSDAGEIYAKKLANFVEKR-LKSERAASIWTSTLQRTILTASPIAGFPKIQ 633
+GRIGGD+ LS G+ +A L+ FVE++ LK R +WTS L+ TI TA + P Q
Sbjct: 262 QGRIGGDSGLSSRGKKFASALSKFVEEQNLKDLR---VWTSQLKSTIQTAEALR-LPYEQ 317
Query: 634 WRALDEINAGVCDGMTYEEIKKNMPEEYEARKKDKLRYRYPRGESYLDVIQRLEPVIIEL 693
W+AL+EI+AGVC+ +TYEEI+ PEEY R++DK YRYP GESY D++QRLEPVI+EL
Sbjct: 318 WKALNEIDAGVCEELTYEEIRDTYPEEYALREQDKYYYRYPTGESYQDLVQRLEPVIMEL 377
Query: 694 ERQRAPVVVISHQ 706
ERQ V+VI HQ
Sbjct: 378 ERQEN-VLVICHQ 389
>pdb|1K6M|A Chain A, Crystal Structure Of Human Liver
6-Phosphofructo-2-KinaseFRUCTOSE-2, 6-Bisphosphatase
pdb|1K6M|B Chain B, Crystal Structure Of Human Liver
6-Phosphofructo-2-KinaseFRUCTOSE-2, 6-Bisphosphatase
Length = 432
Score = 327 bits (838), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 173/360 (48%), Positives = 249/360 (69%), Gaps = 17/360 (4%)
Query: 354 IVLVGLPARGKTFTAAKLTRYLRWLGHDTKHFNVGKYRRLKHGVNQSADFFRADNPEGME 413
+++VGLPARGKT+ + KLTRYL ++G TK FN+G+YRR + ++ +FF DN E ++
Sbjct: 6 VIMVGLPARGKTYISTKLTRYLNFIGTPTKVFNLGQYRR-EAVSYKNYEFFLPDNMEALQ 64
Query: 414 ARNEVAALAMEDMISWM-HEGGQVGIFDATNSSRKRRNMLMKMA-EGNCKIIFLETICND 471
R + A A++D+ +++ HE G V +FDATN++R+RR+++++ A E K+ F+E+ICND
Sbjct: 65 IRKQCALAALKDVHNYLSHEEGHVAVFDATNTTRERRSLILQFAKEHGYKVFFIESICND 124
Query: 472 RDIIERNIRLKIQQSPDYAEEPDFEAGLQDFKNRLANYEKVYEPVDEG-----SYIKMID 526
II NIR SPDY + D E L+DF R+ YE Y+P+DE SYIK+ D
Sbjct: 125 PGIIAENIRQVKLGSPDYID-CDREKVLEDFLKRIECYEVNYQPLDEELDSHLSYIKIFD 183
Query: 527 MVSGHGGQIQVNNISGYLPGRIVFFLVNTHLTPRPILLTRHGESRDNVRGRIGGDTILSD 586
+ G + VN + ++ R V++L+N H+TPR I L RHGES N+RGRIGGD+ LS
Sbjct: 184 V----GTRYMVNRVQDHIQSRTVYYLMNIHVTPRSIYLCRHGESELNIRGRIGGDSGLSV 239
Query: 587 AGEIYAKKLANFVEKRLKSERAASIWTSTLQRTILTASPIAGFPKIQWRALDEINAGVCD 646
G+ YA LANF++ + S + ++TS ++RTI TA + G P Q++AL+EI+AGVC+
Sbjct: 240 RGKQYAYALANFIQSQGIS--SLKVFTSRMKRTIQTAEAL-GVPYEQFKALNEIDAGVCE 296
Query: 647 GMTYEEIKKNMPEEYEARKKDKLRYRYPRGESYLDVIQRLEPVIIELERQRAPVVVISHQ 706
MTYEEI+++ PEE+ R +DK RYRYP+GESY D++QRLEPVI+ELERQ V+VI HQ
Sbjct: 297 EMTYEEIQEHYPEEFALRDQDKYRYRYPKGESYEDLVQRLEPVIMELERQEN-VLVICHQ 355
>pdb|3BIF|A Chain A, 6-Phosphofructo-2-KinaseFRUCTOSE-2,6-Bisphosphatase Empty
6-Pf-2k Active Site
Length = 468
Score = 310 bits (794), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 167/360 (46%), Positives = 235/360 (65%), Gaps = 16/360 (4%)
Query: 354 IVLVGLPARGKTFTAAKLTRYLRWLGHDTKHFNVGKYRRLKHGVNQSADFFRADNPEGME 413
IV+VGLPARGKT+ + KLTRYL ++G T+ FNVG+YRR +S +FF DN EG++
Sbjct: 41 IVMVGLPARGKTYISKKLTRYLNFIGVPTREFNVGQYRRDMVKTYKSFEFFLPDNEEGLK 100
Query: 414 ARNEVAALAMEDMISWM-HEGGQVGIFDATNSSRKRRNMLMKMAEGN-CKIIFLETICND 471
R + A A+ D+ ++ EGG V +FDATN++R+RR M+ E N K F+E+IC D
Sbjct: 101 IRKQCALAALNDVRKFLSEEGGHVAVFDATNTTRERRAMIFNFGEQNGYKTFFVESICVD 160
Query: 472 RDIIERNIRLKIQQSPDYAEEPDFEAGLQDFKNRLANYEKVYEPVDEG-----SYIKMID 526
++I NI SPDY D + +DF R+ YE YE +DE SYIK++D
Sbjct: 161 PEVIAANIVQVKLGSPDYVNR-DSDEATEDFMRRIECYENSYESLDEEQDRDLSYIKIMD 219
Query: 527 MVSGHGGQIQVNNISGYLPGRIVFFLVNTHLTPRPILLTRHGESRDNVRGRIGGDTILSD 586
+ G VN ++ ++ RIV++L+N H+TPR I L RHGES N++GRIGGD LS
Sbjct: 220 V----GQSYVVNRVADHIQSRIVYYLMNIHVTPRSIYLCRHGESELNLKGRIGGDPGLSP 275
Query: 587 AGEIYAKKLANFVEKRLKSERAASIWTSTLQRTILTASPIAGFPKIQWRALDEINAGVCD 646
G ++K LA F+ ++ + ++TS ++RTI TA ++ P Q++ L+EI+AGVC+
Sbjct: 276 RGREFSKHLAQFISD--QNIKDLKVFTSQMKRTIQTAEALS-VPYEQFKVLNEIDAGVCE 332
Query: 647 GMTYEEIKKNMPEEYEARKKDKLRYRYPRGESYLDVIQRLEPVIIELERQRAPVVVISHQ 706
MTYEEI+ + P E+ R +DK RYRYP+GESY D++QRLEPVI+ELERQ V+VI HQ
Sbjct: 333 EMTYEEIQDHYPLEFALRDQDKYRYRYPKGESYEDLVQRLEPVIMELERQEN-VLVICHQ 391
>pdb|1BIF|A Chain A, 6-Phosphofructo-2-KinaseFRUCTOSE-2,6-Bisphosphatase
Bifunctional Enzyme Complexed With Atp-G-S And Phosphate
Length = 469
Score = 310 bits (793), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 167/360 (46%), Positives = 235/360 (65%), Gaps = 16/360 (4%)
Query: 354 IVLVGLPARGKTFTAAKLTRYLRWLGHDTKHFNVGKYRRLKHGVNQSADFFRADNPEGME 413
IV+VGLPARGKT+ + KLTRYL ++G T+ FNVG+YRR +S +FF DN EG++
Sbjct: 42 IVMVGLPARGKTYISKKLTRYLNFIGVPTREFNVGQYRRDMVKTYKSFEFFLPDNEEGLK 101
Query: 414 ARNEVAALAMEDMISWM-HEGGQVGIFDATNSSRKRRNMLMKMAEGN-CKIIFLETICND 471
R + A A+ D+ ++ EGG V +FDATN++R+RR M+ E N K F+E+IC D
Sbjct: 102 IRKQCALAALNDVRKFLSEEGGHVAVFDATNTTRERRAMIFNFGEQNGYKTFFVESICVD 161
Query: 472 RDIIERNIRLKIQQSPDYAEEPDFEAGLQDFKNRLANYEKVYEPVDEG-----SYIKMID 526
++I NI SPDY D + +DF R+ YE YE +DE SYIK++D
Sbjct: 162 PEVIAANIVQVKLGSPDYVNR-DSDEATEDFMRRIECYENSYESLDEEQDRDLSYIKIMD 220
Query: 527 MVSGHGGQIQVNNISGYLPGRIVFFLVNTHLTPRPILLTRHGESRDNVRGRIGGDTILSD 586
+ G VN ++ ++ RIV++L+N H+TPR I L RHGES N++GRIGGD LS
Sbjct: 221 V----GQSYVVNRVADHIQSRIVYYLMNIHVTPRSIYLCRHGESELNLKGRIGGDPGLSP 276
Query: 587 AGEIYAKKLANFVEKRLKSERAASIWTSTLQRTILTASPIAGFPKIQWRALDEINAGVCD 646
G ++K LA F+ ++ + ++TS ++RTI TA ++ P Q++ L+EI+AGVC+
Sbjct: 277 RGREFSKHLAQFISD--QNIKDLKVFTSQMKRTIQTAEALS-VPYEQFKVLNEIDAGVCE 333
Query: 647 GMTYEEIKKNMPEEYEARKKDKLRYRYPRGESYLDVIQRLEPVIIELERQRAPVVVISHQ 706
MTYEEI+ + P E+ R +DK RYRYP+GESY D++QRLEPVI+ELERQ V+VI HQ
Sbjct: 334 EMTYEEIQDHYPLEFALRDQDKYRYRYPKGESYEDLVQRLEPVIMELERQEN-VLVICHQ 392
>pdb|2BIF|A Chain A, 6-Phosphofructo-2-KinaseFRUCTOSE-2,6-Bisphosphatase H256a
Mutant With F6p In Phosphatase Active Site
pdb|2BIF|B Chain B, 6-Phosphofructo-2-KinaseFRUCTOSE-2,6-Bisphosphatase H256a
Mutant With F6p In Phosphatase Active Site
Length = 469
Score = 306 bits (783), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 166/360 (46%), Positives = 234/360 (65%), Gaps = 16/360 (4%)
Query: 354 IVLVGLPARGKTFTAAKLTRYLRWLGHDTKHFNVGKYRRLKHGVNQSADFFRADNPEGME 413
IV+VGLPARGKT+ + KLTRYL ++G T+ FNVG+YRR +S +FF DN EG++
Sbjct: 42 IVMVGLPARGKTYISKKLTRYLNFIGVPTREFNVGQYRRDMVKTYKSFEFFLPDNEEGLK 101
Query: 414 ARNEVAALAMEDMISWM-HEGGQVGIFDATNSSRKRRNMLMKMAEGN-CKIIFLETICND 471
R + A A+ D+ ++ EGG V +FDATN++R+RR M+ E N K F+E+IC D
Sbjct: 102 IRKQCALAALNDVRKFLSEEGGHVAVFDATNTTRERRAMIFNFGEQNGYKTFFVESICVD 161
Query: 472 RDIIERNIRLKIQQSPDYAEEPDFEAGLQDFKNRLANYEKVYEPVDEG-----SYIKMID 526
++I NI SPDY D + +DF R+ YE YE +DE SYIK++D
Sbjct: 162 PEVIAANIVQVKLGSPDYVNR-DSDEATEDFMRRIECYENSYESLDEEQDRDLSYIKIMD 220
Query: 527 MVSGHGGQIQVNNISGYLPGRIVFFLVNTHLTPRPILLTRHGESRDNVRGRIGGDTILSD 586
+ G VN ++ ++ RIV++L+N H+TPR I L R GES N++GRIGGD LS
Sbjct: 221 V----GQSYVVNRVADHIQSRIVYYLMNIHVTPRSIYLCRAGESELNLKGRIGGDPGLSP 276
Query: 587 AGEIYAKKLANFVEKRLKSERAASIWTSTLQRTILTASPIAGFPKIQWRALDEINAGVCD 646
G ++K LA F+ ++ + ++TS ++RTI TA ++ P Q++ L+EI+AGVC+
Sbjct: 277 RGREFSKHLAQFISD--QNIKDLKVFTSQMKRTIQTAEALS-VPYEQFKVLNEIDAGVCE 333
Query: 647 GMTYEEIKKNMPEEYEARKKDKLRYRYPRGESYLDVIQRLEPVIIELERQRAPVVVISHQ 706
MTYEEI+ + P E+ R +DK RYRYP+GESY D++QRLEPVI+ELERQ V+VI HQ
Sbjct: 334 EMTYEEIQDHYPLEFALRDQDKYRYRYPKGESYEDLVQRLEPVIMELERQEN-VLVICHQ 392
>pdb|1C7Z|A Chain A, Regulatory Complex Of Fructose-2,6-Bisphosphatase
pdb|1C7Z|B Chain B, Regulatory Complex Of Fructose-2,6-Bisphosphatase
pdb|1C80|A Chain A, Regulatory Complex Of Fructose-2,6-Bisphosphatase
pdb|1C80|B Chain B, Regulatory Complex Of Fructose-2,6-Bisphosphatase
pdb|1C81|A Chain A, Michaelis Complex Of Fructose-2,6-Bisphosphatase
Length = 191
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 85/147 (57%), Positives = 109/147 (74%), Gaps = 4/147 (2%)
Query: 560 RPILLTRHGESRDNVRGRIGGDTILSDAGEIYAKKLANFVEKRLKSERAASIWTSTLQRT 619
R I L RHGES N+RGRIGGD+ LS G+ YA LANF+ R + + +WTS ++RT
Sbjct: 2 RSIYLCRHGESELNLRGRIGGDSGLSARGKQYAYALANFI--RSQGISSLKVWTSHMKRT 59
Query: 620 ILTASPIAGFPKIQWRALDEINAGVCDGMTYEEIKKNMPEEYEARKKDKLRYRYPRGESY 679
I TA + G P QW+AL+EI+AGVC+ MTYEEI+++ PEE+ R +DK RYRYP+GESY
Sbjct: 60 IQTAEAL-GVPYEQWKALNEIDAGVCEEMTYEEIQEHYPEEFALRDQDKYRYRYPKGESY 118
Query: 680 LDVIQRLEPVIIELERQRAPVVVISHQ 706
D++QRLEPVI+ELERQ V+VI HQ
Sbjct: 119 EDLVQRLEPVIMELERQEN-VLVICHQ 144
>pdb|1FBT|A Chain A, The Bisphosphatase Domain Of The Bifunctional Rat Liver 6-
Phosphofructo-2-KinaseFRUCTOSE-2,6-Bisphosphatase
pdb|1FBT|B Chain B, The Bisphosphatase Domain Of The Bifunctional Rat Liver 6-
Phosphofructo-2-KinaseFRUCTOSE-2,6-Bisphosphatase
Length = 190
Score = 164 bits (415), Expect = 1e-40, Method: Composition-based stats.
Identities = 84/147 (57%), Positives = 106/147 (72%), Gaps = 4/147 (2%)
Query: 560 RPILLTRHGESRDNVRGRIGGDTILSDAGEIYAKKLANFVEKRLKSERAASIWTSTLQRT 619
R I L RHGES N+RGRIGGD+ LS G+ YA LANF+ R + + +WTS +RT
Sbjct: 1 RSIYLCRHGESELNLRGRIGGDSGLSARGKQYAYALANFI--RSQGISSLKVWTSHXKRT 58
Query: 620 ILTASPIAGFPKIQWRALDEINAGVCDGMTYEEIKKNMPEEYEARKKDKLRYRYPRGESY 679
I TA + G P QW+AL+EI+AGVC+ TYEEI+++ PEE+ R +DK RYRYP+GESY
Sbjct: 59 IQTAEAL-GVPYEQWKALNEIDAGVCEEXTYEEIQEHYPEEFALRDQDKYRYRYPKGESY 117
Query: 680 LDVIQRLEPVIIELERQRAPVVVISHQ 706
D++QRLEPVI ELERQ V+VI HQ
Sbjct: 118 EDLVQRLEPVIXELERQEN-VLVICHQ 143
>pdb|1TIP|A Chain A, The Bisphosphatase Domain Of The Bifunctional Rat Liver 6-
Phosphofructo-2-kinase/fructose-2,6-bisphosphatase
pdb|1TIP|B Chain B, The Bisphosphatase Domain Of The Bifunctional Rat Liver 6-
Phosphofructo-2-kinase/fructose-2,6-bisphosphatase
Length = 191
Score = 163 bits (413), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 84/147 (57%), Positives = 108/147 (73%), Gaps = 4/147 (2%)
Query: 560 RPILLTRHGESRDNVRGRIGGDTILSDAGEIYAKKLANFVEKRLKSERAASIWTSTLQRT 619
R I L R GES N+RGRIGGD+ LS G+ YA LANF+ R + + +WTS ++RT
Sbjct: 2 RSIYLCRXGESELNLRGRIGGDSGLSARGKQYAYALANFI--RSQGISSLKVWTSHMKRT 59
Query: 620 ILTASPIAGFPKIQWRALDEINAGVCDGMTYEEIKKNMPEEYEARKKDKLRYRYPRGESY 679
I TA + G P QW+AL+EI+AGVC+ MTYEEI+++ PEE+ R +DK RYRYP+GESY
Sbjct: 60 IQTAEAL-GVPYEQWKALNEIDAGVCEEMTYEEIQEHYPEEFALRDQDKYRYRYPKGESY 118
Query: 680 LDVIQRLEPVIIELERQRAPVVVISHQ 706
D++QRLEPVI+ELERQ V+VI HQ
Sbjct: 119 EDLVQRLEPVIMELERQEN-VLVICHQ 144
>pdb|1EBB|A Chain A, Bacillus Stearothermophilus Yhfr
Length = 202
Score = 64.7 bits (156), Expect = 2e-10, Method: Composition-based stats.
Identities = 52/148 (35%), Positives = 79/148 (53%), Gaps = 10/148 (6%)
Query: 562 ILLTRHGESRDNVRGRIGG--DTILSDAGEIYAKKLANFVEKRLKSERAASIWTSTLQRT 619
+ LTRHGE++ NV R+ G D+ L++ G A +L KRL++ A+I+TST R
Sbjct: 4 LYLTRHGETKWNVERRMQGWQDSPLTEKGRQDAMRLG----KRLEAVELAAIYTSTSGRA 59
Query: 620 ILTASPIAG---FPKIQWRALDEINAGVCDGMTYEEIKKNMPEEYEARKKDKLRYRYPRG 676
+ TA + G P Q L EI+ G +G T++EI++ P ++ + Y RG
Sbjct: 60 LETAEIVRGGRLIPIYQDERLREIHLGDWEGKTHDEIRQMDPIAFDHFWQAPHLYAPQRG 119
Query: 677 ESYLDVIQR-LEPVIIELERQRAPVVVI 703
E + DV QR LE V ++R V+I
Sbjct: 120 ERFCDVQQRALEAVQSIVDRHEGETVLI 147
>pdb|1H2E|A Chain A, Bacillus Stearothermophilus Phoe (Previously Known As
Yhfr) In Complex With Phosphate
pdb|1H2F|A Chain A, Bacillus Stearothermophilus Phoe (Previously Known As
Yhfr) In Complex With Trivanadate
Length = 207
Score = 64.7 bits (156), Expect = 2e-10, Method: Composition-based stats.
Identities = 52/148 (35%), Positives = 79/148 (53%), Gaps = 10/148 (6%)
Query: 562 ILLTRHGESRDNVRGRIGG--DTILSDAGEIYAKKLANFVEKRLKSERAASIWTSTLQRT 619
+ LTRHGE++ NV R+ G D+ L++ G A +L KRL++ A+I+TST R
Sbjct: 4 LYLTRHGETKWNVERRMQGWQDSPLTEKGRQDAMRLG----KRLEAVELAAIYTSTSGRA 59
Query: 620 ILTASPIAG---FPKIQWRALDEINAGVCDGMTYEEIKKNMPEEYEARKKDKLRYRYPRG 676
+ TA + G P Q L EI+ G +G T++EI++ P ++ + Y RG
Sbjct: 60 LETAEIVRGGRLIPIYQDERLREIHLGDWEGKTHDEIRQMDPIAFDHFWQAPHLYAPQRG 119
Query: 677 ESYLDVIQR-LEPVIIELERQRAPVVVI 703
E + DV QR LE V ++R V+I
Sbjct: 120 ERFCDVQQRALEAVQSIVDRHEGETVLI 147
>pdb|2OWE|A Chain A, Crystal Structure Of Tthb049 From Thermus Thermophilus Hb8
Length = 177
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 67/148 (45%), Gaps = 21/148 (14%)
Query: 562 ILLTRHGESRDNVRGRIGG--DTILSDAGEIYAKKLANFVEKRLKSERAASIWTSTLQRT 619
+ L RHGE+ N GR+ G D L+ GE A++L + + ++S L R
Sbjct: 3 LWLVRHGETLWNREGRLLGWTDLPLTAEGEAQARRLKGALP-------SLPAFSSDLLRA 55
Query: 620 ILTASPIAGFPKIQWRALDEINAGVCDGMTYEEIKKNMPEEYEARKKDKLRYR--YPRGE 677
TA +AGF + L EI+ G +G +E + K+ LR++ +P G
Sbjct: 56 RRTAE-LAGFSPRMYPELREIHFGALEGALWETLDPRY-------KEALLRFQGFHPPGG 107
Query: 678 SYLDVIQRLEPVIIELERQRAPVVVISH 705
L Q E V LE +AP V+ +H
Sbjct: 108 ESLSAFQ--ERVFRFLEGLKAPAVLFTH 133
>pdb|2OWD|A Chain A, Crystal Structure Of Tthb049 From Thermus Thermophilus Hb8
pdb|2OWD|B Chain B, Crystal Structure Of Tthb049 From Thermus Thermophilus Hb8
Length = 177
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 67/148 (45%), Gaps = 21/148 (14%)
Query: 562 ILLTRHGESRDNVRGRIGG--DTILSDAGEIYAKKLANFVEKRLKSERAASIWTSTLQRT 619
+ L RHGE+ N GR+ G D L+ GE A++L + + ++S L R
Sbjct: 3 LWLVRHGETLWNREGRLLGWTDLPLTAEGEAQARRLKGALP-------SLPAFSSDLMRA 55
Query: 620 ILTASPIAGFPKIQWRALDEINAGVCDGMTYEEIKKNMPEEYEARKKDKLRYR--YPRGE 677
TA +AGF + L EI+ G +G +E + K+ LR++ +P G
Sbjct: 56 RRTAE-LAGFSPRLYPELREIHFGALEGALWETLDPRY-------KEALLRFQGFHPPGG 107
Query: 678 SYLDVIQRLEPVIIELERQRAPVVVISH 705
L Q E V LE +AP V+ +H
Sbjct: 108 ESLSAFQ--ERVFRFLEGLKAPAVLFTH 133
>pdb|2P2Z|A Chain A, Crystal Structure Of Tthb049 From Thermus Thermophilus Hb8
pdb|2P2Z|B Chain B, Crystal Structure Of Tthb049 From Thermus Thermophilus Hb8
Length = 177
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 67/148 (45%), Gaps = 21/148 (14%)
Query: 562 ILLTRHGESRDNVRGRIGG--DTILSDAGEIYAKKLANFVEKRLKSERAASIWTSTLQRT 619
+ L RHGE+ N GR+ G D L+ GE A++L + + ++S L R
Sbjct: 3 LWLVRHGETLWNREGRLLGWTDLPLTAEGEAQARRLKGALP-------SLPAFSSDLLRA 55
Query: 620 ILTASPIAGFPKIQWRALDEINAGVCDGMTYEEIKKNMPEEYEARKKDKLRYR--YPRGE 677
TA +AGF + L EI+ G +G +E + K+ LR++ +P G
Sbjct: 56 RRTAE-LAGFSPRLYPELREIHFGALEGALWETLDPRY-------KEALLRFQGFHPPGG 107
Query: 678 SYLDVIQRLEPVIIELERQRAPVVVISH 705
L Q E V LE +AP V+ +H
Sbjct: 108 ESLSAFQ--ERVFRFLEGMKAPAVLFTH 133
>pdb|2P6O|A Chain A, Crystal Structure Of Tthb049 From Thermus Thermophilus Hb8
pdb|2P6O|B Chain B, Crystal Structure Of Tthb049 From Thermus Thermophilus Hb8
Length = 177
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 67/148 (45%), Gaps = 21/148 (14%)
Query: 562 ILLTRHGESRDNVRGRIGG--DTILSDAGEIYAKKLANFVEKRLKSERAASIWTSTLQRT 619
+ L RHGE+ N GR+ G D L+ GE A++L + + ++S L R
Sbjct: 3 LWLVRHGETMWNREGRLLGWTDLPLTAEGEAQARRLKGALP-------SLPAFSSDLLRA 55
Query: 620 ILTASPIAGFPKIQWRALDEINAGVCDGMTYEEIKKNMPEEYEARKKDKLRYR--YPRGE 677
TA +AGF + L EI+ G +G +E + K+ LR++ +P G
Sbjct: 56 RRTAE-LAGFSPRLYPELREIHFGALEGALWETLDPRY-------KEALLRFQGFHPPGG 107
Query: 678 SYLDVIQRLEPVIIELERQRAPVVVISH 705
L Q E V LE +AP V+ +H
Sbjct: 108 ESLSAFQ--ERVFRFLEGLKAPAVLFTH 133
>pdb|2P79|A Chain A, Crystal Structure Of Tthb049 From Thermus Thermophilus Hb8
pdb|2P79|B Chain B, Crystal Structure Of Tthb049 From Thermus Thermophilus Hb8
Length = 177
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 67/148 (45%), Gaps = 21/148 (14%)
Query: 562 ILLTRHGESRDNVRGRIGG--DTILSDAGEIYAKKLANFVEKRLKSERAASIWTSTLQRT 619
+ L RHGE+ N GR+ G D L+ GE A++L + + ++S L R
Sbjct: 3 LWLVRHGETLWNREGRLLGWTDLPLTAEGEAQARRLKGALP-------SLPAFSSDLLRA 55
Query: 620 ILTASPIAGFPKIQWRALDEINAGVCDGMTYEEIKKNMPEEYEARKKDKLRYR--YPRGE 677
TA +AGF + L EI+ G +G +E + K+ LR++ +P G
Sbjct: 56 RRTAE-LAGFSPRLYPELREIHFGALEGAMWETLDPRY-------KEALLRFQGFHPPGG 107
Query: 678 SYLDVIQRLEPVIIELERQRAPVVVISH 705
L Q E V LE +AP V+ +H
Sbjct: 108 ESLSAFQ--ERVFRFLEGLKAPAVLFTH 133
>pdb|2P6M|A Chain A, Crystal Structure Of Tthb049 From Thermus Thermophilus Hb8
pdb|2P6M|B Chain B, Crystal Structure Of Tthb049 From Thermus Thermophilus Hb8
Length = 177
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 67/148 (45%), Gaps = 21/148 (14%)
Query: 562 ILLTRHGESRDNVRGRIGG--DTILSDAGEIYAKKLANFVEKRLKSERAASIWTSTLQRT 619
+ L RHGE+ N GR+ G D L+ GE A++L + + ++S L R
Sbjct: 3 LWLVRHGETLWNREGRLLGWTDMPLTAEGEAQARRLKGALP-------SLPAFSSDLLRA 55
Query: 620 ILTASPIAGFPKIQWRALDEINAGVCDGMTYEEIKKNMPEEYEARKKDKLRYR--YPRGE 677
TA +AGF + L EI+ G +G +E + K+ LR++ +P G
Sbjct: 56 RRTAE-LAGFSPRLYPELREIHFGALEGALWETLDPRY-------KEALLRFQGFHPPGG 107
Query: 678 SYLDVIQRLEPVIIELERQRAPVVVISH 705
L Q E V LE +AP V+ +H
Sbjct: 108 ESLSAFQ--ERVFRFLEGLKAPAVLFTH 133
>pdb|2P30|A Chain A, Crystal Structure Of Tthb049 From Thermus Thermophilus Hb8
Length = 177
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 67/148 (45%), Gaps = 21/148 (14%)
Query: 562 ILLTRHGESRDNVRGRIGG--DTILSDAGEIYAKKLANFVEKRLKSERAASIWTSTLQRT 619
+ L RHGE+ N GR+ G D L+ GE A++L + + ++S L R
Sbjct: 3 LWLVRHGETLWNREGRLLGWTDLPLTAEGEAQARRLKGALP-------SLPAFSSDLLRA 55
Query: 620 ILTASPIAGFPKIQWRALDEINAGVCDGMTYEEIKKNMPEEYEARKKDKLRYR--YPRGE 677
TA +AGF + L EI+ G +G +E + K+ LR++ +P G
Sbjct: 56 RRTAE-LAGFSPRLYPELREIHFGALEGALWETLDPRY-------KEALLRFQGFHPPGG 107
Query: 678 SYLDVIQRLEPVIIELERQRAPVVVISH 705
L Q E V LE +AP V+ +H
Sbjct: 108 ESLSAFQ--ERVFRFLEGLKAPAVLFTH 133
>pdb|2P75|A Chain A, Crystal Structure Of Tthb049 From Thermus Thermophilus Hb8
pdb|2P75|B Chain B, Crystal Structure Of Tthb049 From Thermus Thermophilus Hb8
Length = 177
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 67/148 (45%), Gaps = 21/148 (14%)
Query: 562 ILLTRHGESRDNVRGRIGG--DTILSDAGEIYAKKLANFVEKRLKSERAASIWTSTLQRT 619
+ L RHGE+ N GR+ G D L+ GE A++L + + ++S L R
Sbjct: 3 LWLVRHGETLWNREGRLLGWTDLPLTAEGEAQARRLKGAMP-------SLPAFSSDLLRA 55
Query: 620 ILTASPIAGFPKIQWRALDEINAGVCDGMTYEEIKKNMPEEYEARKKDKLRYR--YPRGE 677
TA +AGF + L EI+ G +G +E + K+ LR++ +P G
Sbjct: 56 RRTAE-LAGFSPRLYPELREIHFGALEGALWETLDPRY-------KEALLRFQGFHPPGG 107
Query: 678 SYLDVIQRLEPVIIELERQRAPVVVISH 705
L Q E V LE +AP V+ +H
Sbjct: 108 ESLSAFQ--ERVFRFLEGLKAPAVLFTH 133
>pdb|2P78|A Chain A, Crystal Structure Of Tthb049 From Thermus Thermophilus Hb8
pdb|2P78|B Chain B, Crystal Structure Of Tthb049 From Thermus Thermophilus Hb8
Length = 177
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 67/148 (45%), Gaps = 21/148 (14%)
Query: 562 ILLTRHGESRDNVRGRIGG--DTILSDAGEIYAKKLANFVEKRLKSERAASIWTSTLQRT 619
+ L RHGE+ N GR+ G D L+ GE A++L + + ++S L R
Sbjct: 3 LWLVRHGETLWNREGRLLGWTDLPLTAEGEAQARRLKGALP-------SLPAFSSDLLRA 55
Query: 620 ILTASPIAGFPKIQWRALDEINAGVCDGMTYEEIKKNMPEEYEARKKDKLRYR--YPRGE 677
TA +AGF + L EI+ G +G +E + K+ LR++ +P G
Sbjct: 56 RRTAE-LAGFSPRLYPELREIHFGAMEGALWETLDPRY-------KEALLRFQGFHPPGG 107
Query: 678 SYLDVIQRLEPVIIELERQRAPVVVISH 705
L Q E V LE +AP V+ +H
Sbjct: 108 ESLSAFQ--ERVFRFLEGLKAPAVLFTH 133
>pdb|2P9Y|A Chain A, Crystal Structure Of Tthb049 From Thermus Thermophilus Hb8
pdb|2P9Y|B Chain B, Crystal Structure Of Tthb049 From Thermus Thermophilus Hb8
Length = 177
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 68/148 (45%), Gaps = 21/148 (14%)
Query: 562 ILLTRHGESRDNVRGRIGG--DTILSDAGEIYAKKLANFVEKRLKSERAASIWTSTLQRT 619
+ L RHGE+ N GR+ G D L+ GE A++L + + ++S L R
Sbjct: 3 LWLVRHGETLWNREGRLLGWTDLPLTAEGEAQARRLKGALP-------SLPAFSSDLLRA 55
Query: 620 ILTASPIAGFPKIQWRALDEINAGVCDGMTYEEIKKNMPEEYEARKKDKLRYR--YPRGE 677
TA +AGF + L EI+ G +G +E M Y K+ LR++ +P G
Sbjct: 56 RRTAE-LAGFSPRLYPELREIHFGALEGALWE----TMDPRY---KEALLRFQGFHPPGG 107
Query: 678 SYLDVIQRLEPVIIELERQRAPVVVISH 705
L Q E V LE +AP V+ +H
Sbjct: 108 ESLSAFQ--ERVFRFLEGLKAPAVLFTH 133
>pdb|2P77|A Chain A, Crystal Structure Of Tthb049 From Thermus Thermophilus Hb8
pdb|2P77|B Chain B, Crystal Structure Of Tthb049 From Thermus Thermophilus Hb8
Length = 177
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 67/148 (45%), Gaps = 21/148 (14%)
Query: 562 ILLTRHGESRDNVRGRIGG--DTILSDAGEIYAKKLANFVEKRLKSERAASIWTSTLQRT 619
+ L RHGE+ N GR+ G D L+ GE A++L + + ++S L R
Sbjct: 3 LWLVRHGETLWNREGRLLGWTDLPLTAEGEAQARRLKGALP-------SLPAFSSDLLRA 55
Query: 620 ILTASPIAGFPKIQWRALDEINAGVCDGMTYEEIKKNMPEEYEARKKDKLRYR--YPRGE 677
TA +AGF + L EI+ G +G +E + K+ LR++ +P G
Sbjct: 56 RRTAE-MAGFSPRLYPELREIHFGALEGALWETLDPRY-------KEALLRFQGFHPPGG 107
Query: 678 SYLDVIQRLEPVIIELERQRAPVVVISH 705
L Q E V LE +AP V+ +H
Sbjct: 108 ESLSAFQ--ERVFRFLEGLKAPAVLFTH 133
>pdb|2EKB|A Chain A, Structural Study Of Project Id Tthb049 From Thermus
Thermophilus Hb8 (L19m)
pdb|2EKB|B Chain B, Structural Study Of Project Id Tthb049 From Thermus
Thermophilus Hb8 (L19m)
Length = 177
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 67/148 (45%), Gaps = 21/148 (14%)
Query: 562 ILLTRHGESRDNVRGRIGG--DTILSDAGEIYAKKLANFVEKRLKSERAASIWTSTLQRT 619
+ L RHGE+ N GR+ G D L+ GE A++L + + ++S L R
Sbjct: 3 LWLVRHGETLWNREGRMLGWTDLPLTAEGEAQARRLKGALP-------SLPAFSSDLLRA 55
Query: 620 ILTASPIAGFPKIQWRALDEINAGVCDGMTYEEIKKNMPEEYEARKKDKLRYR--YPRGE 677
TA +AGF + L EI+ G +G +E + K+ LR++ +P G
Sbjct: 56 RRTAE-LAGFSPRLYPELREIHFGALEGALWETLDPRY-------KEALLRFQGFHPPGG 107
Query: 678 SYLDVIQRLEPVIIELERQRAPVVVISH 705
L Q E V LE +AP V+ +H
Sbjct: 108 ESLSAFQ--ERVFRFLEGLKAPAVLFTH 133
>pdb|2PA0|A Chain A, Crystal Structure Of Tthb049 From Thermus Thermophilus Hb8
pdb|2PA0|B Chain B, Crystal Structure Of Tthb049 From Thermus Thermophilus Hb8
Length = 177
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 67/148 (45%), Gaps = 21/148 (14%)
Query: 562 ILLTRHGESRDNVRGRIGG--DTILSDAGEIYAKKLANFVEKRLKSERAASIWTSTLQRT 619
+ L RHGE+ N GR+ G D ++ GE A++L + + ++S L R
Sbjct: 3 LWLVRHGETLWNREGRLLGWTDLPMTAEGEAQARRLKGALP-------SLPAFSSDLLRA 55
Query: 620 ILTASPIAGFPKIQWRALDEINAGVCDGMTYEEIKKNMPEEYEARKKDKLRYR--YPRGE 677
TA +AGF + L EI+ G +G +E + K+ LR++ +P G
Sbjct: 56 RRTAE-LAGFSPRLYPELREIHFGALEGALWETLDPRY-------KEALLRFQGFHPPGG 107
Query: 678 SYLDVIQRLEPVIIELERQRAPVVVISH 705
L Q E V LE +AP V+ +H
Sbjct: 108 ESLSAFQ--ERVFRFLEGLKAPAVLFTH 133
>pdb|2P9F|A Chain A, Crystal Structure Of Tthb049 From Thermus Thermophilus Hb8
pdb|2P9F|B Chain B, Crystal Structure Of Tthb049 From Thermus Thermophilus Hb8
Length = 177
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 67/148 (45%), Gaps = 21/148 (14%)
Query: 562 ILLTRHGESRDNVRGRIGG--DTILSDAGEIYAKKLANFVEKRLKSERAASIWTSTLQRT 619
+ L RHGE+ N GR+ G D L+ GE A++L + + ++S L R
Sbjct: 3 LWLVRHGETLWNREGRLLGWTDLPLTAEGEAQARRLKGALP-------SLPAFSSDLLRA 55
Query: 620 ILTASPIAGFPKIQWRALDEINAGVCDGMTYEEIKKNMPEEYEARKKDKLRYR--YPRGE 677
TA +AGF + + EI+ G +G +E + K+ LR++ +P G
Sbjct: 56 RRTAE-LAGFSPRLYPEMREIHFGALEGALWETLDPRY-------KEALLRFQGFHPPGG 107
Query: 678 SYLDVIQRLEPVIIELERQRAPVVVISH 705
L Q E V LE +AP V+ +H
Sbjct: 108 ESLSAFQ--ERVFRFLEGLKAPAVLFTH 133
>pdb|2P2Y|A Chain A, Crystal Structure Of Tthb049 From Thermus Thermophilus Hb8
Length = 177
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 67/148 (45%), Gaps = 21/148 (14%)
Query: 562 ILLTRHGESRDNVRGRIGG--DTILSDAGEIYAKKLANFVEKRLKSERAASIWTSTLQRT 619
+ + RHGE+ N GR+ G D L+ GE A++L + + ++S L R
Sbjct: 3 LWMVRHGETLWNREGRLLGWTDLPLTAEGEAQARRLKGALP-------SLPAFSSDLLRA 55
Query: 620 ILTASPIAGFPKIQWRALDEINAGVCDGMTYEEIKKNMPEEYEARKKDKLRYR--YPRGE 677
TA +AGF + L EI+ G +G +E + K+ LR++ +P G
Sbjct: 56 RRTAE-LAGFSPRLYPELREIHFGALEGALWETLDPRY-------KEALLRFQGFHPPGG 107
Query: 678 SYLDVIQRLEPVIIELERQRAPVVVISH 705
L Q E V LE +AP V+ +H
Sbjct: 108 ESLSAFQ--ERVFRFLEGLKAPAVLFTH 133
>pdb|2ENU|A Chain A, Mutant L121m Structure Of Tthb049 From Thermus
Thermophilus Hb8
pdb|2ENU|B Chain B, Mutant L121m Structure Of Tthb049 From Thermus
Thermophilus Hb8
Length = 177
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 67/148 (45%), Gaps = 21/148 (14%)
Query: 562 ILLTRHGESRDNVRGRIGG--DTILSDAGEIYAKKLANFVEKRLKSERAASIWTSTLQRT 619
+ L RHGE+ N GR+ G D L+ GE A++L + + ++S L R
Sbjct: 3 LWLVRHGETLWNREGRLLGWTDLPLTAEGEAQARRLKGALP-------SLPAFSSDLLRA 55
Query: 620 ILTASPIAGFPKIQWRALDEINAGVCDGMTYEEIKKNMPEEYEARKKDKLRYR--YPRGE 677
TA +AGF + L EI+ G +G +E + K+ LR++ +P G
Sbjct: 56 RRTAE-LAGFSPRLYPELREIHFGALEGALWETLDPRY-------KEALLRFQGFHPPGG 107
Query: 678 SYLDVIQRLEPVIIELERQRAPVVVISH 705
L Q E V +E +AP V+ +H
Sbjct: 108 ESLSAFQ--ERVFRFMEGLKAPAVLFTH 133
>pdb|2EKZ|A Chain A, Structural Study Of Project Id Tthb049 From Thermus
Thermophilus Hb8 (l52m)
pdb|2EKZ|B Chain B, Structural Study Of Project Id Tthb049 From Thermus
Thermophilus Hb8 (l52m)
Length = 177
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 67/148 (45%), Gaps = 21/148 (14%)
Query: 562 ILLTRHGESRDNVRGRIGG--DTILSDAGEIYAKKLANFVEKRLKSERAASIWTSTLQRT 619
+ L RHGE+ N GR+ G D L+ GE A++L + + ++S + R
Sbjct: 3 LWLVRHGETLWNREGRLLGWTDLPLTAEGEAQARRLKGALP-------SLPAFSSDMLRA 55
Query: 620 ILTASPIAGFPKIQWRALDEINAGVCDGMTYEEIKKNMPEEYEARKKDKLRYR--YPRGE 677
TA +AGF + L EI+ G +G +E + K+ LR++ +P G
Sbjct: 56 RRTAE-LAGFSPRLYPELREIHFGALEGALWETLDPRY-------KEALLRFQGFHPPGG 107
Query: 678 SYLDVIQRLEPVIIELERQRAPVVVISH 705
L Q E V LE +AP V+ +H
Sbjct: 108 ESLSAFQ--ERVFRFLEGLKAPAVLFTH 133
>pdb|2ENW|A Chain A, Mutant Y92h Structure Of Tthb049 From Thermus Thermophilus
Hb8
pdb|2ENW|B Chain B, Mutant Y92h Structure Of Tthb049 From Thermus Thermophilus
Hb8
Length = 177
Score = 40.4 bits (93), Expect = 0.003, Method: Composition-based stats.
Identities = 46/146 (31%), Positives = 67/146 (45%), Gaps = 21/146 (14%)
Query: 564 LTRHGESRDNVRGRIGG--DTILSDAGEIYAKKLANFVEKRLKSERAASIWTSTLQRTIL 621
L RHGE+ N GR+ G D L+ GE A++L + + ++S L R
Sbjct: 5 LVRHGETLWNREGRLLGWTDLPLTAEGEAQARRLKGALP-------SLPAFSSDLLRARR 57
Query: 622 TASPIAGFPKIQWRALDEINAGVCDGMTYEEIKKNMPEEYEARKKDKLRYR--YPRGESY 679
TA +AGF + L EI+ G +G +E + P EA LR++ +P G
Sbjct: 58 TAE-LAGFSPRLYPELREIHFGALEGALWETLD---PRHKEAL----LRFQGFHPPGGES 109
Query: 680 LDVIQRLEPVIIELERQRAPVVVISH 705
L Q E V LE +AP V+ +H
Sbjct: 110 LSAFQ--ERVFRFLEGLKAPAVLFTH 133
>pdb|1V37|A Chain A, Crystal Structure Of Phosphoglycerate Mutase From Thermus
Thermophilus Hb8
pdb|1V37|B Chain B, Crystal Structure Of Phosphoglycerate Mutase From Thermus
Thermophilus Hb8
pdb|1V7Q|A Chain A, Crystal Structure Of Phosphoglycerate Mutase From Thermus
Thermophilus Hb8
pdb|2HIA|A Chain A, Crystal Structure Of Tthb049 From Thermus Thermophilus Hb8
Length = 177
Score = 39.7 bits (91), Expect = 0.005, Method: Composition-based stats.
Identities = 46/146 (31%), Positives = 67/146 (45%), Gaps = 21/146 (14%)
Query: 564 LTRHGESRDNVRGRIGG--DTILSDAGEIYAKKLANFVEKRLKSERAASIWTSTLQRTIL 621
L RHGE+ N GR+ G D L+ GE A++L + + ++S L R
Sbjct: 5 LVRHGETLWNREGRLLGWTDLPLTAEGEAQARRLKGALP-------SLPAFSSDLLRARR 57
Query: 622 TASPIAGFPKIQWRALDEINAGVCDGMTYEEIKKNMPEEYEARKKDKLRYR--YPRGESY 679
TA +AGF + L EI+ G +G +E + P EA LR++ +P G
Sbjct: 58 TAE-LAGFSPRLYPELREIHFGALEGALWETLD---PRYKEAL----LRFQGFHPPGGES 109
Query: 680 LDVIQRLEPVIIELERQRAPVVVISH 705
L Q E V LE +AP V+ +H
Sbjct: 110 LSAFQ--ERVFRFLEGLKAPAVLFTH 133
>pdb|2EOA|A Chain A, Structural Study Of Project Id Tthb049 From Thermus
Thermophilus Hb8 (W85h)
pdb|2EOA|B Chain B, Structural Study Of Project Id Tthb049 From Thermus
Thermophilus Hb8 (W85h)
Length = 177
Score = 39.3 bits (90), Expect = 0.007, Method: Composition-based stats.
Identities = 46/146 (31%), Positives = 67/146 (45%), Gaps = 21/146 (14%)
Query: 564 LTRHGESRDNVRGRIGG--DTILSDAGEIYAKKLANFVEKRLKSERAASIWTSTLQRTIL 621
L RHGE+ N GR+ G D L+ GE A++L + + ++S L R
Sbjct: 5 LVRHGETLWNREGRLLGWTDLPLTAEGEAQARRLKGALP-------SLPAFSSDLLRARR 57
Query: 622 TASPIAGFPKIQWRALDEINAGVCDGMTYEEIKKNMPEEYEARKKDKLRYR--YPRGESY 679
TA +AGF + L EI+ G +G +E + P EA LR++ +P G
Sbjct: 58 TAE-LAGFSPRLYPELREIHFGALEGALHETLD---PRYKEAL----LRFQGFHPPGGES 109
Query: 680 LDVIQRLEPVIIELERQRAPVVVISH 705
L Q E V LE +AP V+ +H
Sbjct: 110 LSAFQ--ERVFRFLEGLKAPAVLFTH 133
>pdb|3KKK|A Chain A, Y92c Catalytic Residue Mutant Of Phosphoglycerate Mutase
From Plasmodium Falciparum
pdb|3KKK|B Chain B, Y92c Catalytic Residue Mutant Of Phosphoglycerate Mutase
From Plasmodium Falciparum
pdb|3KKK|C Chain C, Y92c Catalytic Residue Mutant Of Phosphoglycerate Mutase
From Plasmodium Falciparum
pdb|3KKK|D Chain D, Y92c Catalytic Residue Mutant Of Phosphoglycerate Mutase
From Plasmodium Falciparum
Length = 258
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 53/112 (47%), Gaps = 10/112 (8%)
Query: 557 LTPRPILLTRHGESRDNVRGRIGG--DTILSDAGEIYAKKLANFVEKRLKSERAASIWTS 614
+T ++L RHGES N + G D LS+ GE A ++++ K+ + ++TS
Sbjct: 9 MTTYTLVLLRHGESTWNKENKFTGWTDVPLSEKGEEEAIAAGKYLKE--KNFKFDVVYTS 66
Query: 615 TLQRTILTA------SPIAGFPKIQWRALDEINAGVCDGMTYEEIKKNMPEE 660
L+R I TA + + P ++ L+E + G G+ E K EE
Sbjct: 67 VLKRAICTAWNVLKTADLLHVPVVKTWRLNERHCGSLQGLNKSETAKKYGEE 118
>pdb|2P9Z|A Chain A, Crystal Structure Of Tthb049 From Thermus Thermophilus Hb8
pdb|2P9Z|B Chain B, Crystal Structure Of Tthb049 From Thermus Thermophilus Hb8
Length = 177
Score = 37.7 bits (86), Expect = 0.021, Method: Composition-based stats.
Identities = 46/146 (31%), Positives = 66/146 (45%), Gaps = 21/146 (14%)
Query: 564 LTRHGESRDNVRGRIGG--DTILSDAGEIYAKKLANFVEKRLKSERAASIWTSTLQRTIL 621
L RHGE+ N GR+ G D L+ GE A++L + + ++S L R
Sbjct: 5 LVRHGETLWNREGRLLGWTDLPLTAEGEAQARRLKGALP-------SLPAFSSDLLRARR 57
Query: 622 TASPIAGFPKIQWRALDEINAGVCDGMTYEEIKKNMPEEYEARKKDKLRYR--YPRGESY 679
TA +AGF L EI+ G +G +E + P EA LR++ +P G
Sbjct: 58 TAE-LAGFSPRLHPELREIHFGALEGALWETLD---PRYKEAL----LRFQGFHPPGGES 109
Query: 680 LDVIQRLEPVIIELERQRAPVVVISH 705
L Q E V LE +AP V+ +H
Sbjct: 110 LSAFQ--ERVFRFLEGLKAPAVLFTH 133
>pdb|1XQ9|A Chain A, Structure Of Phosphoglycerate Mutase From Plasmodium
Falciparum At 2.6 Resolution
pdb|1XQ9|B Chain B, Structure Of Phosphoglycerate Mutase From Plasmodium
Falciparum At 2.6 Resolution
Length = 258
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 53/112 (47%), Gaps = 10/112 (8%)
Query: 557 LTPRPILLTRHGESRDNVRGRIGG--DTILSDAGEIYAKKLANFVEKRLKSERAASIWTS 614
+T ++L RHGES N + G D LS+ GE A ++++ K+ + ++TS
Sbjct: 9 MTTYTLVLLRHGESTWNKENKFTGWTDVPLSEKGEEEAIAAGKYLKE--KNFKFDVVYTS 66
Query: 615 TLQRTILTA------SPIAGFPKIQWRALDEINAGVCDGMTYEEIKKNMPEE 660
L+R I TA + + P ++ L+E + G G+ E K EE
Sbjct: 67 VLKRAICTAWNVLKTADLLHVPVVKTWRLNERHYGSLQGLNKSETAKKYGEE 118
>pdb|1CYG|A Chain A, Cyclodextrin Glucanotransferase (E.C.2.4.1.19) (Cgtase)
Length = 680
Score = 35.8 bits (81), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 9/89 (10%)
Query: 33 VSLKMVNIKLKGDLIPHVY--GSVPLVGSWDSSKALA-MGRE---SASMWELSFVVPPNH 86
VS++ V +L ++Y G+V +G+WD+SKA+ M + S W + VP
Sbjct: 580 VSVRFVVNNATTNLGQNIYIVGNVYELGNWDTSKAIGPMFNQVVYSYPTWYIDVSVPEG- 638
Query: 87 ETLDFKFLLKPKYGNGPCIVEEGPNRLLT 115
+T++FKF+ K GN E G N + T
Sbjct: 639 KTIEFKFIKKDSQGN--VTWESGSNHVYT 665
>pdb|2V3C|C Chain C, Crystal Structure Of The Srp54-Srp19-7s.S Srp Rna Complex
Of M. Jannaschii
pdb|2V3C|D Chain D, Crystal Structure Of The Srp54-Srp19-7s.S Srp Rna Complex
Of M. Jannaschii
Length = 432
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Query: 344 LGPKEHRHLAIVLVGLPARGKTFTAAKLTRYLRWLGHDTKHFNVGKYR 391
L PK+ I+LVG+ GKT TAAKL RY++ G YR
Sbjct: 94 LNPKKQN--VILLVGIQGSGKTTTAAKLARYIQKRGLKPALIAADTYR 139
>pdb|3NDB|B Chain B, Crystal Structure Of A Signal Sequence Bound To The Signal
Recognition Particle
Length = 454
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Query: 344 LGPKEHRHLAIVLVGLPARGKTFTAAKLTRYLRWLGHDTKHFNVGKYR 391
L PK+ I+LVG+ GKT TAAKL RY++ G YR
Sbjct: 94 LNPKKQN--VILLVGIQGSGKTTTAAKLARYIQKRGLKPALIAADTYR 139
>pdb|1FZT|A Chain A, Solution Structure And Dynamics Of An Open B-Sheet,
Glycolytic Enzyme-Monomeric 23.7 Kda Phosphoglycerate
Mutase From Schizosaccharomyces Pombe
Length = 211
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 61/146 (41%), Gaps = 14/146 (9%)
Query: 553 VNTHLTPRPILLTRHGESRDNVRGRIGG--DTILSDAGEIYAKKLANFVEKRLKSE--RA 608
+ T P ++LTRHGES N G D LS+ G I KL +RLKS +
Sbjct: 1 MTTEAAPNLLVLTRHGESEWNKLNLFTGWKDPALSETG-IKEAKLGG---ERLKSRGYKF 56
Query: 609 ASIWTSTLQRTILTASPI---AGFPK---IQWRALDEINAGVCDGMTYEEIKKNMPEEYE 662
+TS LQR T I G P I+ L+E G G+ ++ +K E
Sbjct: 57 DIAFTSALQRAQKTCQIILEEVGEPNLETIKSEKLNERYYGDLQGLNKDDARKKWGAEQV 116
Query: 663 ARKKDKLRYRYPRGESYLDVIQRLEP 688
+ P GES D +R+ P
Sbjct: 117 QIWRRSYDIAPPNGESLKDTAERVLP 142
>pdb|2J37|W Chain W, Model Of Mammalian Srp Bound To 80s Rncs
Length = 504
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 5/60 (8%)
Query: 346 PKEHRHLAIVLVGLPARGKTFTAAKLTRYLRWLGHDT-----KHFNVGKYRRLKHGVNQS 400
P + + I+ VGL GKT T +KL Y + G T F G + +LK ++
Sbjct: 96 PTKGKQNVIMFVGLQGSGKTTTCSKLAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKA 155
>pdb|3DM5|A Chain A, Structures Of Srp54 And Srp19, The Two Proteins Assembling
The Ribonucleic Core Of The Signal Recognition Particle
From The Archaeon Pyrococcus Furiosus.
pdb|3DM5|B Chain B, Structures Of Srp54 And Srp19, The Two Proteins Assembling
The Ribonucleic Core Of The Signal Recognition Particle
From The Archaeon Pyrococcus Furiosus
Length = 443
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 51/112 (45%), Gaps = 16/112 (14%)
Query: 354 IVLVGLPARGKTFTAAKLTRYLRWLGHD-----TKHFNVGKYRRLKHGVNQSADFFRAD- 407
+++VG+ GKT T AKL RY + G+ + + G Y H + Q D + +
Sbjct: 103 LLMVGIQGSGKTTTVAKLARYFQKRGYKVGVVCSDTWRPGAY----HQLRQLLDRYHIEV 158
Query: 408 --NPEGMEARNEVAALAMEDMISWMHEGGQVGIFDATNSSRKRRNMLMKMAE 457
NP+ +A LA E + + +G + I D ++ + ++ +M +
Sbjct: 159 FGNPQEKDA----IKLAKEGVDYFKSKGVDIIIVDTAGRHKEDKALIEEMKQ 206
>pdb|1E59|A Chain A, E.Coli Cofactor-Dependent Phosphoglycerate Mutase
Complexed With Vanadate
Length = 249
Score = 30.4 bits (67), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 38/82 (46%), Gaps = 14/82 (17%)
Query: 562 ILLTRHGESRDNVRGRIGG--DTILSDAGEIYAKKLANFVEKRLKSERAASIWTSTLQRT 619
++L RHGES+ N R G D LS+ G AK +++ S A +TS L+R
Sbjct: 5 LVLVRHGESQWNKENRFTGWYDVDLSEKGVSEAKAAGKLLKEEGYSFDFA--YTSVLKRA 62
Query: 620 ILTASPIAGFPKIQWRALDEIN 641
I T W LDE++
Sbjct: 63 IHTL----------WNVLDELD 74
>pdb|3QXV|A Chain A, Structure Of An Anti-Methotrexate Cdr1-4 Graft Vhh
Antibody In Complex With Methotrexate
pdb|3QXV|B Chain B, Structure Of An Anti-Methotrexate Cdr1-4 Graft Vhh
Antibody In Complex With Methotrexate
pdb|3QXV|C Chain C, Structure Of An Anti-Methotrexate Cdr1-4 Graft Vhh
Antibody In Complex With Methotrexate
pdb|3QXV|D Chain D, Structure Of An Anti-Methotrexate Cdr1-4 Graft Vhh
Antibody In Complex With Methotrexate
pdb|3QXV|E Chain E, Structure Of An Anti-Methotrexate Cdr1-4 Graft Vhh
Antibody In Complex With Methotrexate
pdb|3QXW|A Chain A, Free Structure Of An Anti-Methotrexate Cdr1-4 Graft Vhh
Antibody
pdb|3QXW|B Chain B, Free Structure Of An Anti-Methotrexate Cdr1-4 Graft Vhh
Antibody
pdb|3QXW|C Chain C, Free Structure Of An Anti-Methotrexate Cdr1-4 Graft Vhh
Antibody
pdb|3QXW|D Chain D, Free Structure Of An Anti-Methotrexate Cdr1-4 Graft Vhh
Antibody
pdb|3QXW|E Chain E, Free Structure Of An Anti-Methotrexate Cdr1-4 Graft Vhh
Antibody
Length = 126
Score = 30.0 bits (66), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 47/119 (39%), Gaps = 19/119 (15%)
Query: 65 ALAMGRESASMWELS-FVVPPNHETLDFKFLLKPKYGNGPCIVEEGPNRLLTGGALQGDS 123
+ A R S+ W ++ F P E +F+ K G RL T GDS
Sbjct: 23 SCAASRRSSRSWAMAWFRQAPGKER---EFVAKI----------SGDGRLTT----YGDS 65
Query: 124 RSALFRLDSDEVLEYRVFIKADRVSPFDLAASWRAYQENLEPSTVRGIPDVSINSVQQT 182
F + D EY V+++ D + P D A + A +N ++ R PD Q T
Sbjct: 66 VKGRFTISRDNA-EYLVYLQMDSLKPEDTAVYYCAADDNYVTASWRSGPDYWGQGTQVT 123
>pdb|3D8H|A Chain A, Crystal Structure Of Phosphoglycerate Mutase From
Cryptosporidium Parvum, Cgd7_4270
pdb|3D8H|B Chain B, Crystal Structure Of Phosphoglycerate Mutase From
Cryptosporidium Parvum, Cgd7_4270
Length = 267
Score = 29.6 bits (65), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 52/120 (43%), Gaps = 22/120 (18%)
Query: 557 LTPR----PILLTRHGESRDNVRGRIGG--DTILSDAG---EIYAKKLANFVEKRLKSER 607
L PR + L RHGES N R G D LS+ G I A ++ +EK K +
Sbjct: 14 LVPRGSTYKLTLIRHGESEWNKENRFTGWTDVSLSEQGVSEAIEAGRM--LLEKGFKFD- 70
Query: 608 AASIWTSTLQRTILTASPI------AGFPKI-QWRALDEINAGVCDGMTYEEIKKNMPEE 660
++TS L+R I+T + P I WR L+E + G G+ E E+
Sbjct: 71 --VVYTSVLKRAIMTTWTVLKELGNINCPIINHWR-LNERHYGALQGLNKSETASKFGED 127
>pdb|1D6J|A Chain A, Crystal Structure Of Adenosine 5'-Phosphosulfate (Aps)
Kinase From Penicillium Chrysogenum
pdb|1D6J|B Chain B, Crystal Structure Of Adenosine 5'-Phosphosulfate (Aps)
Kinase From Penicillium Chrysogenum
pdb|1M7G|A Chain A, Crystal Structure Of Aps Kinase From Penicillium
Chrysogenum: Ternary Structure With Adp And Aps
pdb|1M7G|B Chain B, Crystal Structure Of Aps Kinase From Penicillium
Chrysogenum: Ternary Structure With Adp And Aps
pdb|1M7G|C Chain C, Crystal Structure Of Aps Kinase From Penicillium
Chrysogenum: Ternary Structure With Adp And Aps
pdb|1M7G|D Chain D, Crystal Structure Of Aps Kinase From Penicillium
Chrysogenum: Ternary Structure With Adp And Aps
pdb|1M7H|A Chain A, Crystal Structure Of Aps Kinase From Penicillium
Chrysogenum: Structure With Aps Soaked Out Of One Dimer
pdb|1M7H|B Chain B, Crystal Structure Of Aps Kinase From Penicillium
Chrysogenum: Structure With Aps Soaked Out Of One Dimer
pdb|1M7H|C Chain C, Crystal Structure Of Aps Kinase From Penicillium
Chrysogenum: Structure With Aps Soaked Out Of One Dimer
pdb|1M7H|D Chain D, Crystal Structure Of Aps Kinase From Penicillium
Chrysogenum: Structure With Aps Soaked Out Of One Dimer
Length = 211
Score = 29.3 bits (64), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 34/79 (43%), Gaps = 10/79 (12%)
Query: 347 KEHRHLAIVLVGLPARGKTFTAAKLTRYLRWLGHDTKHFNVGKYR----RLKHGVNQSAD 402
+ R L I L GL A GK+ A +L L + V YR ++ G+N+
Sbjct: 21 RNQRGLTIWLTGLSASGKSTLAVELEHQL------VRDRRVHAYRLDGDNIRFGLNKDLG 74
Query: 403 FFRADNPEGMEARNEVAAL 421
F AD E + EVA L
Sbjct: 75 FSEADRNENIRRIAEVAKL 93
>pdb|3CR7|A Chain A, Crystal Structure Of N-Terminal Truncation Of Aps Kinase
From Penicillium Chrysogenum: Ternary Structure With Adp
And Paps
pdb|3CR7|B Chain B, Crystal Structure Of N-Terminal Truncation Of Aps Kinase
From Penicillium Chrysogenum: Ternary Structure With Adp
And Paps
pdb|3CR7|C Chain C, Crystal Structure Of N-Terminal Truncation Of Aps Kinase
From Penicillium Chrysogenum: Ternary Structure With Adp
And Paps
pdb|3CR7|D Chain D, Crystal Structure Of N-Terminal Truncation Of Aps Kinase
From Penicillium Chrysogenum: Ternary Structure With Adp
And Paps
Length = 197
Score = 29.3 bits (64), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 33/77 (42%), Gaps = 10/77 (12%)
Query: 349 HRHLAIVLVGLPARGKTFTAAKLTRYLRWLGHDTKHFNVGKYR----RLKHGVNQSADFF 404
R L I L GL A GK+ A +L L + V YR ++ G+N+ F
Sbjct: 1 QRGLTIWLTGLSASGKSTLAVELEHQL------VRDRRVHAYRLDGDNIRFGLNKDLGFS 54
Query: 405 RADNPEGMEARNEVAAL 421
AD E + EVA L
Sbjct: 55 EADRNENIRRIAEVAKL 71
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.134 0.390
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,411,281
Number of Sequences: 62578
Number of extensions: 843716
Number of successful extensions: 2145
Number of sequences better than 100.0: 52
Number of HSP's better than 100.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 35
Number of HSP's that attempted gapping in prelim test: 2086
Number of HSP's gapped (non-prelim): 58
length of query: 707
length of database: 14,973,337
effective HSP length: 106
effective length of query: 601
effective length of database: 8,340,069
effective search space: 5012381469
effective search space used: 5012381469
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)