Your job contains 1 sequence.
>005234
MLEKQMGSNFFRKILQNIISRAQGASPVRTLSTKEFRHFANKVGNLERPFLKEFFPRWVG
TCGCPVLRMGFSYNKRKNIVELAVLRDCTVKPDSRTPVLSSNTDSENRDGDIGWPGMMSI
RVHELDGMYDHPILPMAGDAWQLLEIQCHSKLAARRALKPKKGSKPDGCDDNGDAVAGLD
MRSSMESPLSWIRADPEMEYLAEIHFNQPVQMWINQLEKDGDVVAQAQAIAALEALPHLS
FNVVNTLNNFLSDSKAFWRVRIEAAYALANTASEETDWAGLLHLVKFYKSRRFDENIGLP
RPNDFRDFSEYFVLEAIPHAVAMVRAADNKSPREAVEFVLQLLKYNDNNGNPYSDVFWLA
ALVQSVGELEFGQQSILFLSSLLKRIDRLLQFDRLMPSYNGILTISCIRTLTQIALKLSG
FISLDQVVKLIKPFRDFNTIWQVRVEASRALLDLEFHCNGIDSALSLFIKSVEEEPSLRG
QVKLGIHAMRICQIKGGSDSNHEVDTVTLVALLNLLESRIAFNNVFLRHHLFGILQILAG
RAPTLYGVPRDKLLLLGDGETSEQKNVFASFVTEMRRAEPPMDVPNLSQDNLAVRDASKE
VDCVANGHAENILAVPEAQRMQMSFPTVMNGKWQFQKPQRKQKLFPTVMKGSCRLLRLGL
NNLLQLVEQTRLIIEPLKNLKVGIMKMTVAPVVLFLSMHPKGIQQRQ
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 005234
(707 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2031571 - symbol:TAF2 "TBP-associated factor 2... 1987 6.1e-207 2
DICTYBASE|DDB_G0292724 - symbol:taf2 "TFIID subunit" spec... 495 5.4e-51 3
POMBASE|SPAC3A12.05c - symbol:taf2 "TATA-binding protein ... 299 1.6e-31 2
UNIPROTKB|E2QT19 - symbol:TAF2 "Uncharacterized protein" ... 350 3.3e-31 2
UNIPROTKB|F1NKW6 - symbol:F1NKW6 "Uncharacterized protein... 343 3.6e-31 2
UNIPROTKB|K7GP24 - symbol:TAF2 "Uncharacterized protein" ... 348 4.2e-31 2
UNIPROTKB|Q6P1X5 - symbol:TAF2 "Transcription initiation ... 349 4.2e-31 2
UNIPROTKB|F6UTN8 - symbol:TAF2 "Uncharacterized protein" ... 348 5.6e-31 2
ZFIN|ZDB-GENE-030131-3207 - symbol:taf2 "TAF2 RNA polymer... 351 8.3e-31 2
MGI|MGI:2443028 - symbol:Taf2 "TAF2 RNA polymerase II, TA... 349 8.4e-31 2
UNIPROTKB|F1LNY6 - symbol:Taf2 "Protein Taf2" species:101... 346 1.2e-30 2
UNIPROTKB|Q5ZIT8 - symbol:TAF2 "Transcription initiation ... 343 1.9e-30 2
UNIPROTKB|F1S282 - symbol:TAF2 "Uncharacterized protein" ... 348 7.5e-30 2
UNIPROTKB|F1MME0 - symbol:TAF2 "Uncharacterized protein" ... 337 1.5e-29 2
FB|FBgn0011836 - symbol:Taf2 "TBP-associated factor 2" sp... 339 1.2e-27 2
ASPGD|ASPL0000043622 - symbol:AN1494 species:162425 "Emer... 262 9.0e-26 2
WB|WBGene00006383 - symbol:taf-2 species:6239 "Caenorhabd... 293 3.7e-22 1
SGD|S000000638 - symbol:TAF2 "TFIID subunit (150 kDa)" sp... 219 7.1e-21 2
UNIPROTKB|G4N720 - symbol:MGG_03637 "TATA-binding protein... 223 9.0e-21 2
>TAIR|locus:2031571 [details] [associations]
symbol:TAF2 "TBP-associated factor 2" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008237 "metallopeptidase activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0009506 "plasmodesma"
evidence=IDA] [GO:0009630 "gravitropism" evidence=RCA]
InterPro:IPR014782 Pfam:PF01433 EMBL:CP002684 GO:GO:0009506
GO:GO:0008270 GO:GO:0004222 KO:K03128 OMA:YNDNSGN EMBL:AY102124
IPI:IPI00546623 RefSeq:NP_177536.2 UniGene:At.21897
ProteinModelPortal:Q8LPF0 IntAct:Q8LPF0 STRING:Q8LPF0 PRIDE:Q8LPF0
EnsemblPlants:AT1G73960.1 GeneID:843733 KEGG:ath:AT1G73960
TAIR:At1g73960 HOGENOM:HOG000084774 InParanoid:Q8LPF0
PhylomeDB:Q8LPF0 ProtClustDB:CLSN2690496 Genevestigator:Q8LPF0
Uniprot:Q8LPF0
Length = 1390
Score = 1987 (704.5 bits), Expect = 6.1e-207, Sum P(2) = 6.1e-207
Identities = 388/584 (66%), Positives = 456/584 (78%)
Query: 1 MLEKQMGSNFFRKILQNIISRAQGAS-PVRTLSTKEFRHFANKVGNLERPFLKEFFPRWV 59
MLEKQMGS+ FRKILQ IISRA+ S +R+LSTKEFR FANK+GNLERPFLKEFF RWV
Sbjct: 450 MLEKQMGSDSFRKILQKIISRAKDPSNSIRSLSTKEFRQFANKIGNLERPFLKEFFQRWV 509
Query: 60 GTCGCPVLRMGFSYNKRKNIVELAVLRDCTVKPDSRTPVLSSNTDSENRDGDIGWPGMMS 119
+ GCPVLR+G SYNKRKN VE+A LR+CT D+R V+ + +DSE+RD D GWPG+MS
Sbjct: 510 ASYGCPVLRIGLSYNKRKNNVEMAALRECTAALDARLSVIGATSDSESRDVDAGWPGIMS 569
Query: 120 IRVHELDGMYDHPILPMAGDAWQLLEIQCHSXXXXXXXXXXXXGSKPDGCDDNGDAVAGL 179
IRV+ELDGM DHP LPMAGD WQLLE+ CHS G KPDG +DN DA+A L
Sbjct: 570 IRVYELDGMSDHPKLPMAGDRWQLLELPCHSKLAAKRYQKPKKGGKPDGAEDNVDAIAPL 629
Query: 180 DMRSSMESPLSWIRADPEMEYLAEIHFNQPVQMWINQLEKDGDVVXXXXXXXXXXXXPHL 239
+ ++S+ESPL+WI+ADPEMEY+AEIH +QP+QMW+NQLEKDGDVV
Sbjct: 630 ENKTSIESPLAWIKADPEMEYIAEIHLHQPLQMWVNQLEKDGDVVAQAQAIASLEALKQH 689
Query: 240 SFNVVNTLNNFLSDSKAFWRVRIEAAYALANTASEETDWAGLLHLVKFYKSRRFDENIGL 299
SF++VN L N L+DSK FWR+RI AA+ALA TASEE+DWAGL HL+KFYKSRRFD IGL
Sbjct: 690 SFSIVNALKNVLTDSKVFWRIRIAAAFALAKTASEESDWAGLQHLIKFYKSRRFDAEIGL 749
Query: 300 PRPNDFRDFSEYFVLEAIPHAVAMVRAADNKSPREAVEFVLQLLKYNDNNGNPYSDVFWL 359
P+PNDFRDF EYFVLEAIPHA+A+VR A+ KSPREAVEF+LQLLKYNDN+GN YSDVFWL
Sbjct: 750 PKPNDFRDFPEYFVLEAIPHAIAIVRGAEGKSPREAVEFILQLLKYNDNSGNSYSDVFWL 809
Query: 360 AALVQSVGELEFGQQSILFLSSLLKRIDRLLQFDRLMPSYNGILTISCIRTLTQIALKLS 419
A LVQSVG+LEF QQS+ FL+ LLKRIDRLLQFDRLMPSYNGILTISCIRTL Q ALKLS
Sbjct: 810 AVLVQSVGDLEFCQQSLTFLAPLLKRIDRLLQFDRLMPSYNGILTISCIRTLAQTALKLS 869
Query: 420 GFISLDQVVKLIKPFRDFNTIWQVRVEASRALLDLEFHCNGIDSALSLFIKSVEEEPSLR 479
IS D + KLI+PFR+ +TI Q+R+E SRALLD+E+ GI SAL LF+K + EE SLR
Sbjct: 870 DSISFDHICKLIEPFRNSDTILQIRIEGSRALLDIEYQSKGISSALLLFMKYLVEESSLR 929
Query: 480 GQVKLGIHAMRICQIKGGSDSNHEVDTVTLVALLNLLESRIAFNNVFLRHHLFGILQILA 539
GQVKL +H MR+CQI G DS+ VDTVTL+ LL+L +S + FNN LR++LF I QILA
Sbjct: 930 GQVKLCVHTMRLCQIAVGCDSDDCVDTVTLLDLLHLFKSHVVFNNELLRYYLFCIFQILA 989
Query: 540 GRAPTLYGVPRDKLLLLGDGETS-EQKNVFASFVTEMRRAEPPM 582
GR PTL+GVP++K L L D E E KNVF V EP +
Sbjct: 990 GRPPTLFGVPKEKPLQLVDVEACIEPKNVF--LVPGAEAGEPSL 1031
Score = 37 (18.1 bits), Expect = 6.1e-207, Sum P(2) = 6.1e-207
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 617 EAQRMQMSFPTVMNGKWQFQKPQRKQK 643
EAQ+ S T+ GK + +K +++K
Sbjct: 1272 EAQQKYASLQTLSIGKEKEKKKDKEKK 1298
>DICTYBASE|DDB_G0292724 [details] [associations]
symbol:taf2 "TFIID subunit" species:44689
"Dictyostelium discoideum" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=IEA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0005669 "transcription factor TFIID complex"
evidence=ISS] [GO:0006413 "translational initiation" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
InterPro:IPR014782 Pfam:PF01433 dictyBase:DDB_G0292724
GenomeReviews:CM000155_GR EMBL:AAFI02000194 GO:GO:0008270
eggNOG:COG0308 GO:GO:0004222 GO:GO:0006366 GO:GO:0003743
GO:GO:0005669 KO:K03128 RefSeq:XP_002649090.1
EnsemblProtists:DDB0304679 GeneID:8628785 KEGG:ddi:DDB_G0292724
OMA:DRDKEHR Uniprot:C7G081
Length = 2044
Score = 495 (179.3 bits), Expect = 5.4e-51, Sum P(3) = 5.4e-51
Identities = 113/366 (30%), Positives = 200/366 (54%)
Query: 116 GMMSIRVHELDGMYDHPILPMAGDAWQLLEIQCHSXXXXXXXXXXXXGSKPDGCDDNGDA 175
G + IR+ ELDG ++ ++ D ++ + CHS K ++G+
Sbjct: 648 GTLMIRIVELDGSFEQ-VINFEDDMFEY-DFPCHSRCRKT--------KKKKLLSEDGEE 697
Query: 176 VAGLDMRSSMESPLSWIRADPEMEYLAEIHFNQPVQMWINQLEKDGDVVXXXXXXXXXXX 235
+ +D+ E+PL W R DPE+E++ I F QP MWI+QLE D DV+
Sbjct: 698 ME-IDLSQKRETPLLWFRIDPELEWIHRITFRQPEYMWIHQLELDRDVIAQMEAIKGLKD 756
Query: 236 XPHLSFNVVNTLNNFLSDSKAFWRVRIEAAYALANTASEETDWAGLLHLVKFYKSRRFDE 295
++SFN V + F+ +S+ F+RVR +AA L+ +++ET++ GL LV ++K FD
Sbjct: 757 --YISFNSVRAVFKFIQNSRYFYRVRCDAAMLLSKLSTKETNFEGLNVLVSYFKGLFFDR 814
Query: 296 NIGLPRPNDFRDFSEYFVLEAIPHAVAMVRAADNKSPREAVEFVLQLLKYNDNNGNPYSD 355
+ +PN F+DF+ YF+ ++IP ++++++ + ++P E +EF+++LLK NDN+ N YSD
Sbjct: 815 DSNQLKPNSFKDFNSYFMQKSIPLSISLIKDKEGRTPIECIEFLIELLKDNDNSLNTYSD 874
Query: 356 VFWLAALVQSVGELEFGQQSILFLSSLLKRIDRLLQFDRLMPSYNGILTISCIRTLTQIA 415
++L AL+ + + + L L + K++ R L++D+L PSY +TI C++ Q+
Sbjct: 875 CYYLEALLSAFSNIHTTNE--LLLKKIKKQVARYLKYDQLYPSYRNCVTIGCLKAYCQLY 932
Query: 416 LKLSGFISLDQVVKLIKPFRDFNTIWQVRVEASRALLDL--EFHCN-GIDSALSLFIKSV 472
+ LD L K + ++ +VR A +++ L +F C+ G S F+
Sbjct: 933 SIKNSKDDLD--FTLFKEYSTYSHFEEVRKVALQSIYKLAYQFQCSPGTGSINDYFLDLF 990
Query: 473 EEEPSL 478
+ E +L
Sbjct: 991 DNEQTL 996
Score = 72 (30.4 bits), Expect = 5.4e-51, Sum P(3) = 5.4e-51
Identities = 15/45 (33%), Positives = 26/45 (57%)
Query: 51 LKEFFPRWVGTCGCPVLRMGFSYNKRKNIVELAVLRDCTVKPDSR 95
LK F +W+ G P L GF++N++K + E A L+ +P+ +
Sbjct: 602 LKHFSEKWIYGRGSPNLICGFNFNRKKFMTEFA-LKQVLNRPEDK 645
Score = 37 (18.1 bits), Expect = 5.4e-51, Sum P(3) = 5.4e-51
Identities = 5/20 (25%), Positives = 14/20 (70%)
Query: 1 MLEKQMGSNFFRKILQNIIS 20
M+EK++ RK++ ++++
Sbjct: 472 MIEKRISEEGLRKVINSLLN 491
>POMBASE|SPAC3A12.05c [details] [associations]
symbol:taf2 "TATA-binding protein associated factor
Taf2 (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0000785 "chromatin" evidence=NAS] [GO:0000991 "core RNA
polymerase II binding transcription factor activity" evidence=ISO]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005669 "transcription
factor TFIID complex" evidence=ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=ISO] [GO:0008237
"metallopeptidase activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0032153 "cell division site"
evidence=IDA] InterPro:IPR014782 Pfam:PF01433 PomBase:SPAC3A12.05c
GO:GO:0005829 EMBL:CU329670 GO:GO:0006355 GenomeReviews:CU329670_GR
GO:GO:0032153 GO:GO:0008270 GO:GO:0000785 GO:GO:0008237
eggNOG:COG0308 GO:GO:0006367 GO:GO:0000991 GO:GO:0005669 KO:K03128
PIR:T38673 RefSeq:NP_593331.2 ProteinModelPortal:P87121
STRING:P87121 EnsemblFungi:SPAC3A12.05c.1 GeneID:2543107
KEGG:spo:SPAC3A12.05c HOGENOM:HOG000157894 OMA:YNDNSGN
OrthoDB:EOG43JGCZ NextBio:20804134 Uniprot:P87121
Length = 1172
Score = 299 (110.3 bits), Expect = 1.6e-31, Sum P(2) = 1.6e-31
Identities = 69/237 (29%), Positives = 121/237 (51%)
Query: 191 WIRADPEMEYLAEIHFNQPVQMWINQLEKDGDVVXXXXXXXXXXXXPH-LSFNVVNTLNN 249
WIR D + E++ ++ QP M+++QL++D DVV +S V L
Sbjct: 699 WIRVDADFEWICDLRVRQPEHMYVSQLQQDRDVVAQLETIRHFTSESFTVSQQVSTVLLR 758
Query: 250 FLSDSKAFWRVRIEAAYALANTASEETDWAGLLHLVKFYKSRRFDENIGLPRPNDFRDFS 309
L D++ ++ +R EAA ALA A E DW G HL Y + ++ +P+ NDF + +
Sbjct: 759 TLLDNRYYYGIRQEAARALARCAIPELDWVGYYHLRMAYLEKFCFKDSTIPKSNDFSNIT 818
Query: 310 EYFVLEAIPHAVAMVRAADNKSPREAVEFVLQLLKYNDNNGNPYSDVFWLAALVQSV--G 367
EY+V A+ + +R +P + +L LL YNDN N +SD +++ L+ S+ G
Sbjct: 819 EYYVKCAMLESFPNIRDRKGVTPSSVKKLLLDLLCYNDNANNEFSDAYFICLLIDSLVEG 878
Query: 368 ELEFGQ---------QSILFLSSLLKRIDRLLQFDRLMPSYNGILTISCIRTLTQIA 415
+ G+ + + F++ ++ IDR ++ D MPS+ I+T ++ ++A
Sbjct: 879 LIPRGETVQYAFSDPEHMEFVNQVINEIDRYMRIDACMPSFKNIITCKSLKAKLRLA 935
Score = 134 (52.2 bits), Expect = 1.6e-31, Sum P(2) = 1.6e-31
Identities = 49/184 (26%), Positives = 83/184 (45%)
Query: 2 LEKQMGSNFFRKILQNIISRAQGASPVR-TLSTKEFRHFANKVGNLERPFLKEFFPRWVG 60
L K GS +++ ++ + + LST F K ++ L F +W+
Sbjct: 481 LTKTGGSLGMSRVIPKLLLQVMSGDMLNGCLSTSHFLKTCEKASHMR---LDVFAQQWIY 537
Query: 61 TCGCPVLRMGFSYNKRKNIVELAVLRDCTVKPDSRTPVLSSN--TDS----ENRDGDIGW 114
G P+ R+ +N++K I+E+ + + T K R P+ N +D+ N G
Sbjct: 538 GYGYPIFRVVQRFNRKKMIIEMGIDQVQT-KEAPRAPMSDKNFLSDAIRHLNNESIPTGL 596
Query: 115 P---GMMSIRVHELDGM-YDHPILPMAGDAWQLLEIQCHSXXXXXXXXXXXXGSKPDGCD 170
P G M+IR+HE DG Y+H ++ + D++ L+IQ ++ K DG D
Sbjct: 597 PVFSGPMTIRIHEADGTPYEH-VVELK-DSFTKLDIQYNTKYKRISRNRSTKNVKRDG-D 653
Query: 171 DNGD 174
NGD
Sbjct: 654 HNGD 657
>UNIPROTKB|E2QT19 [details] [associations]
symbol:TAF2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA]
Ensembl:ENSCAFT00000001363 GO:GO:0008237 GO:GO:0008270
InterPro:IPR016024 InterPro:IPR014782 Pfam:PF01433 SUPFAM:SSF48371
Uniprot:E2QT19
Length = 1202
Score = 350 (128.3 bits), Expect = 3.3e-31, Sum P(2) = 3.3e-31
Identities = 105/376 (27%), Positives = 175/376 (46%)
Query: 116 GMMSIRVHELDGMYDHPILPMAGDAWQLLEIQCHSXXXXXXXXXXXXGSKPDGCDDNGDA 175
G + + V ELDG ++H L + ++ + +I CHS K NG+
Sbjct: 563 GPLKVTVQELDGSFNHT-LQIEENSLKH-DIPCHSKSRR--------NKKKKIPLMNGEE 612
Query: 176 VAGLDMRS-SMESPLSWIRADPEMEYLAEIHFNQPVQMWINQLEKDGDVVXXXXXXXXXX 234
V +D+ + +SPL WIR DP+M L ++ F Q MW QL + DVV
Sbjct: 613 V-DMDLSAMDADSPLLWIRIDPDMSVLRKVEFEQADFMWQYQLRYERDVVAQQESILALE 671
Query: 235 XXPHLSFNVVNTLNNFLSDSKAFWRVRIEAAYALANTA-SEETDWAGLLHLVKFYKSRRF 293
P + + L + L + F+RVR+ A + LA A S + W G + + +R F
Sbjct: 672 KFPTPASRLA--LTDILEQEQCFYRVRMSACFCLAKIANSMVSTWTGPPAMKSLF-TRMF 728
Query: 294 DENI--GLPRPNDFRDFSEYFVLEAIPHAVAMVRAADNKSPREAVEFVLQLLKYNDNNGN 351
+ + N+F F YF+ + +P A+A++R N P+E + F+L L+KYNDN N
Sbjct: 729 CCKTCPNIVKTNNFMSFQSYFLQKTMPVAMALLRDVHNLCPKEVLTFILDLIKYNDNRKN 788
Query: 352 PYSDVFWLA----ALVQSVGELEFGQQSILFLSSL-------LKRIDRLLQFDRLMPSYN 400
+SD ++ A AL SV + L +L L+ I R L ++L+PSY
Sbjct: 789 KFSDNYYRAEMIDALANSVTPAVSVNNEVRTLDNLNPDVRLILEEITRFLNMEKLLPSYR 848
Query: 401 GILTISCIRTLTQIALKLSGFISLDQVVKLIKPFRDFNTIWQVRVEASRALLDLEFHCNG 460
+T+SC+R + L+ +G + D L K + ++ +R+ A A++D +
Sbjct: 849 HTITVSCLRAIR--VLQKNGHVPSDPA--LFKSYAEYGHFVDIRIAALEAVVDYTKAVDR 904
Query: 461 IDSALSLFIKSVEEEP 476
L + ++ +P
Sbjct: 905 SYEELQWLLNMIQNDP 920
Score = 77 (32.2 bits), Expect = 3.3e-31, Sum P(2) = 3.3e-31
Identities = 23/116 (19%), Positives = 49/116 (42%)
Query: 1 MLEKQMGSNFFRKILQNIISRAQGASPVRTLSTK------EFRHFANKVGNLERPFLKEF 54
++E ++ F ++ ++S A AS + S F + N+ ++
Sbjct: 460 LIENRISMEFMLQVFNKLLSLASTASSQKFQSHMWSQMLVSTSGFLKSISNVSGKDIQPL 519
Query: 55 FPRWVGTCGCPVLRMGFSYNKRKNIVELAVLRDCTVKPDSRTPVLSSNTDSENRDG 110
+WV G F++N+++N++EL + +D T P ++ V + DG
Sbjct: 520 IKQWVDQSGVVKFYGSFAFNRKRNVLELEIKQDYT-SPGTQKYVGPLKVTVQELDG 574
>UNIPROTKB|F1NKW6 [details] [associations]
symbol:F1NKW6 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000086 "G2/M transition of mitotic cell cycle"
evidence=IEA] [GO:0005669 "transcription factor TFIID complex"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IEA] [GO:0033276 "transcription
factor TFTC complex" evidence=IEA] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR016024 GO:GO:0000086 SUPFAM:SSF48371
GO:GO:0045944 GO:GO:0044212 GO:GO:0006367 GO:GO:0005669
GO:GO:0033276 GeneTree:ENSGT00390000000420 EMBL:AADN02022570
EMBL:AADN02022571 EMBL:AADN02022572 EMBL:AADN02022573
EMBL:AADN02022574 EMBL:AADN02022575 EMBL:AADN02022576
EMBL:AADN02022577 EMBL:AADN02022578 EMBL:AADN02022579
EMBL:AADN02022580 IPI:IPI01017150 Ensembl:ENSGALT00000026491
OMA:ADFIANS ArrayExpress:F1NKW6 Uniprot:F1NKW6
Length = 770
Score = 343 (125.8 bits), Expect = 3.6e-31, Sum P(2) = 3.6e-31
Identities = 103/353 (29%), Positives = 169/353 (47%)
Query: 116 GMMSIRVHELDGMYDHPILPMAGDAWQLLEIQCHSXXXXXXXXXXXXGSKPDGCDDNGDA 175
G + + V ELDG ++H L + ++ + +I CHS K NG+
Sbjct: 137 GPLKVTVQELDGSFNHT-LQIEENSLKH-DIPCHSKSRR--------NKKKKIPLMNGEE 186
Query: 176 VAGLDMRS-SMESPLSWIRADPEMEYLAEIHFNQPVQMWINQLEKDGDVVXXXXXXXXXX 234
V +D+ + +SPL WIR DP+M L ++ F Q MW QL + DVV
Sbjct: 187 V-DMDLSAMDADSPLLWIRIDPDMSVLRKVEFEQSDFMWQYQLRYERDVVAQEEAILALE 245
Query: 235 XXPHLSFNVVNTLNNFLSDSKAFWRVRIEAAYALANTA-SEETDWAGLLHLVKFYKSRRF 293
P + + L + L + F+RVR+ A + LA A S + W G + + +R F
Sbjct: 246 KFPTPASRLA--LTDILEQEQCFYRVRMLACFCLAKIANSMVSTWTGPPAMKSLF-TRMF 302
Query: 294 DENI--GLPRPNDFRDFSEYFVLEAIPHAVAMVRAADNKSPREAVEFVLQLLKYNDNNGN 351
+ + N+F +F YF+ + +P A+A++R N P+E + F+L L+KYNDN N
Sbjct: 303 CCKTCPNIVKTNNFMNFQSYFLQKTMPVAMALLRDVHNLCPKEVLMFILDLIKYNDNRKN 362
Query: 352 PYSDVFWLA----ALVQSVGELEFGQQSILFLSSL-------LKRIDRLLQFDRLMPSYN 400
+SD ++ A AL SV + L +L L+ I R L ++L+PSY
Sbjct: 363 KFSDNYYRAELIDALANSVTPAVSVNNEVRTLDNLNPDVRLILEEITRFLNMEKLLPSYR 422
Query: 401 GILTISCIRTLTQIALKLSGFISLDQVVKLIKPFRDFNTIWQVRVEASRALLD 453
+T+SC++ + L+ +G + D L K + ++ VR+ A A++D
Sbjct: 423 HTITVSCLKAIR--VLQKNGHVPSDPA--LFKSYAEYGHFVDVRIAALEAVVD 471
Score = 77 (32.2 bits), Expect = 3.6e-31, Sum P(2) = 3.6e-31
Identities = 23/116 (19%), Positives = 49/116 (42%)
Query: 1 MLEKQMGSNFFRKILQNIISRAQGASPVRTLSTK------EFRHFANKVGNLERPFLKEF 54
++E ++ F ++ ++S A AS + S F + N+ ++
Sbjct: 34 LIENRISMEFMLQVFNKLLSLASTASSQKFQSHMWSQMLVSTSGFLKSISNVSGKDIQPL 93
Query: 55 FPRWVGTCGCPVLRMGFSYNKRKNIVELAVLRDCTVKPDSRTPVLSSNTDSENRDG 110
+WV G F++N+++N++EL + +D T P ++ V + DG
Sbjct: 94 IKQWVDQSGVVKFYGSFAFNRKRNVLELEIKQDYT-SPGTQKYVGPLKVTVQELDG 148
>UNIPROTKB|K7GP24 [details] [associations]
symbol:TAF2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008237
"metallopeptidase activity" evidence=IEA] InterPro:IPR014782
InterPro:IPR016024 Pfam:PF01433 SUPFAM:SSF48371
GeneTree:ENSGT00390000000420 EMBL:CU467749 EMBL:CU326377
Ensembl:ENSSSCT00000033583 Uniprot:K7GP24
Length = 1100
Score = 348 (127.6 bits), Expect = 4.2e-31, Sum P(2) = 4.2e-31
Identities = 103/353 (29%), Positives = 168/353 (47%)
Query: 116 GMMSIRVHELDGMYDHPILPMAGDAWQLLEIQCHSXXXXXXXXXXXXGSKPDGCDDNGDA 175
G + + V ELDG ++H L + ++ + +I CHS K NG+
Sbjct: 463 GPLKVTVQELDGSFNHT-LQIEENSLKH-DIPCHSKSRR--------NKKKKIPLMNGEE 512
Query: 176 VAGLDMRS-SMESPLSWIRADPEMEYLAEIHFNQPVQMWINQLEKDGDVVXXXXXXXXXX 234
V +D+ + +SPL WIR DP+M L ++ F Q MW QL + DVV
Sbjct: 513 V-DMDLSAMDADSPLLWIRIDPDMSVLRKVEFEQADFMWQYQLRYERDVVAQQESILALE 571
Query: 235 XXPHLSFNVVNTLNNFLSDSKAFWRVRIEAAYALANTA-SEETDWAGLLHLVKFYKSRRF 293
P + + L + L + F+RVR+ A + LA A S + W G + + +R F
Sbjct: 572 KFPTPASRLA--LTDILEQEQCFYRVRMSACFCLAKIANSMVSTWTGPPAMKSLF-TRMF 628
Query: 294 DENI--GLPRPNDFRDFSEYFVLEAIPHAVAMVRAADNKSPREAVEFVLQLLKYNDNNGN 351
+ + N+F F YF+ + +P A+A++R N P+E + F+L L+KYNDN N
Sbjct: 629 CCKTCPNIVKTNNFMSFQSYFLQKTMPVAMALLRDVHNLCPKEVLTFILDLIKYNDNRKN 688
Query: 352 PYSDVFWLA----ALVQSVGELEFGQQSILFLSSL-------LKRIDRLLQFDRLMPSYN 400
+SD ++ A AL SV + L +L L+ I R L ++L+PSY
Sbjct: 689 KFSDNYYRAEMIDALANSVTPAVSVNNEVRTLDNLNPDVRLILEEITRFLNMEKLLPSYR 748
Query: 401 GILTISCIRTLTQIALKLSGFISLDQVVKLIKPFRDFNTIWQVRVEASRALLD 453
+T+SC+R + L+ +G + D L K + ++ +R+ A A++D
Sbjct: 749 HTITVSCLRAIR--VLQKNGHVPSDP--SLFKSYAEYGHFVDIRIAALEAVVD 797
Score = 77 (32.2 bits), Expect = 4.2e-31, Sum P(2) = 4.2e-31
Identities = 23/116 (19%), Positives = 49/116 (42%)
Query: 1 MLEKQMGSNFFRKILQNIISRAQGASPVRTLSTK------EFRHFANKVGNLERPFLKEF 54
++E ++ F ++ ++S A AS + S F + N+ ++
Sbjct: 360 LIENRISMEFMLQVFNKLLSLASTASSQKFQSHMWSQMLVSTSGFLKSISNVSGKDIQPL 419
Query: 55 FPRWVGTCGCPVLRMGFSYNKRKNIVELAVLRDCTVKPDSRTPVLSSNTDSENRDG 110
+WV G F++N+++N++EL + +D T P ++ V + DG
Sbjct: 420 IKQWVDQSGVVKFYGSFAFNRKRNVLELEIKQDYT-SPGTQKYVGPLKVTVQELDG 474
>UNIPROTKB|Q6P1X5 [details] [associations]
symbol:TAF2 "Transcription initiation factor TFIID subunit
2" species:9606 "Homo sapiens" [GO:0008237 "metallopeptidase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IMP] [GO:0005669 "transcription factor TFIID
complex" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0000086 "G2/M transition of mitotic cell
cycle" evidence=IMP] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IMP] InterPro:IPR014782
InterPro:IPR016024 Pfam:PF01433 GO:GO:0000086 SUPFAM:SSF48371
GO:GO:0008270 GO:GO:0045944 GO:GO:0008237 eggNOG:COG0308
GO:GO:0044212 GO:GO:0014070 GO:GO:0006367 GO:GO:0005669
EMBL:AC107960 GO:GO:0033276 MEROPS:M01.972 HOVERGEN:HBG094022
CTD:6873 KO:K03128 OMA:PCVDSFA OrthoDB:EOG46HG8V EMBL:AF026445
EMBL:AF040701 EMBL:AF057694 EMBL:AK316592 EMBL:AC021945
EMBL:BC035673 EMBL:BC047732 EMBL:BC064830 IPI:IPI00328144
RefSeq:NP_003175.1 UniGene:Hs.122752 ProteinModelPortal:Q6P1X5
IntAct:Q6P1X5 STRING:Q6P1X5 PhosphoSite:Q6P1X5 DMDM:145559533
PaxDb:Q6P1X5 PRIDE:Q6P1X5 DNASU:6873 Ensembl:ENST00000378164
GeneID:6873 KEGG:hsa:6873 UCSC:uc003you.3 GeneCards:GC08M120812
HGNC:HGNC:11536 MIM:604912 neXtProt:NX_Q6P1X5 PharmGKB:PA36311
InParanoid:Q6P1X5 ChiTaRS:TAF2 GenomeRNAi:6873 NextBio:26833
ArrayExpress:Q6P1X5 Bgee:Q6P1X5 CleanEx:HS_TAF2
Genevestigator:Q6P1X5 GermOnline:ENSG00000064313 Uniprot:Q6P1X5
Length = 1199
Score = 349 (127.9 bits), Expect = 4.2e-31, Sum P(2) = 4.2e-31
Identities = 103/353 (29%), Positives = 168/353 (47%)
Query: 116 GMMSIRVHELDGMYDHPILPMAGDAWQLLEIQCHSXXXXXXXXXXXXGSKPDGCDDNGDA 175
G + + V ELDG ++H L + ++ + +I CHS K NG+
Sbjct: 562 GPLKVTVQELDGSFNHT-LQIEENSLKH-DIPCHSKSRR--------NKKKKIPLMNGEE 611
Query: 176 VAGLDMRS-SMESPLSWIRADPEMEYLAEIHFNQPVQMWINQLEKDGDVVXXXXXXXXXX 234
V +D+ + +SPL WIR DP+M L ++ F Q MW QL + DVV
Sbjct: 612 V-DMDLSAMDADSPLLWIRIDPDMSVLRKVEFEQADFMWQYQLRYERDVVAQQESILALE 670
Query: 235 XXPHLSFNVVNTLNNFLSDSKAFWRVRIEAAYALANTA-SEETDWAGLLHLVKFYKSRRF 293
P + + L + L + F+RVR+ A + LA A S + W G + + +R F
Sbjct: 671 KFPTPASRLA--LTDILEQEQCFYRVRMSACFCLAKIANSMVSTWTGPPAMKSLF-TRMF 727
Query: 294 --DENIGLPRPNDFRDFSEYFVLEAIPHAVAMVRAADNKSPREAVEFVLQLLKYNDNNGN 351
+ + N+F F YF+ + +P A+A++R N P+E + F+L L+KYNDN N
Sbjct: 728 CCKSCPNIVKTNNFMSFQSYFLQKTMPVAMALLRDVHNLCPKEVLTFILDLIKYNDNRKN 787
Query: 352 PYSDVFWLA----ALVQSVGELEFGQQSILFLSSL-------LKRIDRLLQFDRLMPSYN 400
+SD ++ A AL SV + L +L L+ I R L ++L+PSY
Sbjct: 788 KFSDNYYRAEMIDALANSVTPAVSVNNEVRTLDNLNPDVRLILEEITRFLNMEKLLPSYR 847
Query: 401 GILTISCIRTLTQIALKLSGFISLDQVVKLIKPFRDFNTIWQVRVEASRALLD 453
+T+SC+R + L+ +G + D L K + ++ +R+ A A++D
Sbjct: 848 HTITVSCLRAIR--VLQKNGHVPSDPA--LFKSYAEYGHFVDIRIAALEAVVD 896
Score = 77 (32.2 bits), Expect = 4.2e-31, Sum P(2) = 4.2e-31
Identities = 23/116 (19%), Positives = 49/116 (42%)
Query: 1 MLEKQMGSNFFRKILQNIISRAQGASPVRTLSTK------EFRHFANKVGNLERPFLKEF 54
++E ++ F ++ ++S A AS + S F + N+ ++
Sbjct: 459 LIENRISMEFMLQVFNKLLSLASTASSQKFQSHMWSQMLVSTSGFLKSISNVSGKDIQPL 518
Query: 55 FPRWVGTCGCPVLRMGFSYNKRKNIVELAVLRDCTVKPDSRTPVLSSNTDSENRDG 110
+WV G F++N+++N++EL + +D T P ++ V + DG
Sbjct: 519 IKQWVDQSGVVKFYGSFAFNRKRNVLELEIKQDYT-SPGTQKYVGPLKVTVQELDG 573
>UNIPROTKB|F6UTN8 [details] [associations]
symbol:TAF2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA]
InterPro:IPR014782 InterPro:IPR016024 Pfam:PF01433 SUPFAM:SSF48371
GO:GO:0008270 GO:GO:0008237 GeneTree:ENSGT00390000000420
Ensembl:ENSCAFT00000001363 EMBL:AAEX03008768 OMA:CFCLAKX
Uniprot:F6UTN8
Length = 1206
Score = 348 (127.6 bits), Expect = 5.6e-31, Sum P(2) = 5.6e-31
Identities = 103/353 (29%), Positives = 168/353 (47%)
Query: 116 GMMSIRVHELDGMYDHPILPMAGDAWQLLEIQCHSXXXXXXXXXXXXGSKPDGCDDNGDA 175
G + + V ELDG ++H L + ++ + +I CHS K NG+
Sbjct: 562 GPLKVTVQELDGSFNHT-LQIEENSLKH-DIPCHSKSRR--------NKKKKIPLMNGEE 611
Query: 176 VAGLDMRS-SMESPLSWIRADPEMEYLAEIHFNQPVQMWINQLEKDGDVVXXXXXXXXXX 234
V +D+ + +SPL WIR DP+M L ++ F Q MW QL + DVV
Sbjct: 612 V-DMDLSAMDADSPLLWIRIDPDMSVLRKVEFEQADFMWQYQLRYERDVVAQQESILALE 670
Query: 235 XXPHLSFNVVNTLNNFLSDSKAFWRVRIEAAYALANTA-SEETDWAGLLHLVKFYKSRRF 293
P + + L + L + F+RVR+ A + LA A S + W G + + +R F
Sbjct: 671 KFPTPASRLA--LTDILEQEQCFYRVRMSACFCLAKIANSMVSTWTGPPAMKSLF-TRMF 727
Query: 294 DENI--GLPRPNDFRDFSEYFVLEAIPHAVAMVRAADNKSPREAVEFVLQLLKYNDNNGN 351
+ + N+F F YF+ + +P A+A++R N P+E + F+L L+KYNDN N
Sbjct: 728 CCKTCPNIVKTNNFMSFQSYFLQKTMPVAMALLRDVHNLCPKEVLTFILDLIKYNDNRKN 787
Query: 352 PYSDVFWLA----ALVQSVGELEFGQQSILFLSSL-------LKRIDRLLQFDRLMPSYN 400
+SD ++ A AL SV + L +L L+ I R L ++L+PSY
Sbjct: 788 KFSDNYYRAEMIDALANSVTPAVSVNNEVRTLDNLNPDVRLILEEITRFLNMEKLLPSYR 847
Query: 401 GILTISCIRTLTQIALKLSGFISLDQVVKLIKPFRDFNTIWQVRVEASRALLD 453
+T+SC+R + L+ +G + D L K + ++ +R+ A A++D
Sbjct: 848 HTITVSCLRAIR--VLQKNGHVPSDPA--LFKSYAEYGHFVDIRIAALEAVVD 896
Score = 77 (32.2 bits), Expect = 5.6e-31, Sum P(2) = 5.6e-31
Identities = 23/116 (19%), Positives = 49/116 (42%)
Query: 1 MLEKQMGSNFFRKILQNIISRAQGASPVRTLSTK------EFRHFANKVGNLERPFLKEF 54
++E ++ F ++ ++S A AS + S F + N+ ++
Sbjct: 459 LIENRISMEFMLQVFNKLLSLASTASSQKFQSHMWSQMLVSTSGFLKSISNVSGKDIQPL 518
Query: 55 FPRWVGTCGCPVLRMGFSYNKRKNIVELAVLRDCTVKPDSRTPVLSSNTDSENRDG 110
+WV G F++N+++N++EL + +D T P ++ V + DG
Sbjct: 519 IKQWVDQSGVVKFYGSFAFNRKRNVLELEIKQDYT-SPGTQKYVGPLKVTVQELDG 573
>ZFIN|ZDB-GENE-030131-3207 [details] [associations]
symbol:taf2 "TAF2 RNA polymerase II, TATA box
binding protein (TBP)-associated factor" species:7955 "Danio rerio"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008237
"metallopeptidase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR014782 Pfam:PF01433
ZFIN:ZDB-GENE-030131-3207 GO:GO:0005634 GO:GO:0006355 GO:GO:0008270
GO:GO:0008237 GO:GO:0006351 eggNOG:COG0308 HOVERGEN:HBG094022
EMBL:AY648781 EMBL:BC076415 EMBL:BC091664 EMBL:BC107957
IPI:IPI00508952 RefSeq:NP_001003835.1 UniGene:Dr.20641
ProteinModelPortal:Q32PW3 STRING:Q32PW3 Ensembl:ENSDART00000056072
GeneID:324486 KEGG:dre:324486 CTD:6873 GeneTree:ENSGT00390000000420
HOGENOM:HOG000046103 InParanoid:Q32PW3 KO:K03128 OMA:PCVDSFA
OrthoDB:EOG46HG8V NextBio:20808797 Uniprot:Q32PW3
Length = 1191
Score = 351 (128.6 bits), Expect = 8.3e-31, Sum P(2) = 8.3e-31
Identities = 106/376 (28%), Positives = 177/376 (47%)
Query: 116 GMMSIRVHELDGMYDHPILPMAGDAWQLLEIQCHSXXXXXXXXXXXXGSKPDGCDDNGDA 175
G + + V ELDG ++H L + ++ + +I CHS K NG+
Sbjct: 551 GPIKVTVQELDGSFNHT-LQIEENSLKH-DIPCHSKSRR--------NKKKKIPLMNGEE 600
Query: 176 VAGLDMRS-SMESPLSWIRADPEMEYLAEIHFNQPVQMWINQLEKDGDVVXXXXXXXXXX 234
V +D+ + +SPL WIR DP+M L ++ F Q MW QL + DVV
Sbjct: 601 V-DMDLSAMDADSPLLWIRIDPDMSILRKVEFEQADFMWQYQLRYERDVVAQEEAILALE 659
Query: 235 XXPHLSFNVVNTLNNFLSDSKAFWRVRIEAAYALANTA-SEETDWAGLLHLVKFYKSRRF 293
P L + L + F++VR+ A + LA A S + W G + + +R F
Sbjct: 660 KFPTPPSR--RALTDILEQDQCFYKVRMHACFCLAKIANSMVSTWTGPPAMKSLF-TRMF 716
Query: 294 --DENIGLPRPNDFRDFSEYFVLEAIPHAVAMVRAADNKSPREAVEFVLQLLKYNDNNGN 351
+ + N+F F YF+ + IP A+A +R N PRE + F+L L+KYNDN N
Sbjct: 717 CCKSCPNIVKTNNFISFQSYFLQKTIPVAMAQLRDVQNLCPREVLSFILDLIKYNDNRKN 776
Query: 352 PYSDVFWLAALVQSVGE-----LEFGQQ--SILFLSS----LLKRIDRLLQFDRLMPSYN 400
+SD ++ A L+ ++ + + ++ L++ +L+ I R L ++L+PSY
Sbjct: 777 KFSDNYYRAELIDALTNSLTPAISINNEVRTVDSLNADVRLILEEITRFLNMEKLLPSYR 836
Query: 401 GILTISCIRTLTQIALKLSGFISLDQVVKLIKPFRDFNTIWQVRVEASRALLDLEFHCNG 460
+T+SC+R + L+ +G I D L K + ++ VR+ A A++D +
Sbjct: 837 NTITVSCLRAIRM--LQKNGHIPSDPT--LFKSYAEYGHFVDVRIAALEAVIDYT-RVDR 891
Query: 461 IDSALSLFIKSVEEEP 476
S L + V+ +P
Sbjct: 892 SSSELQWLLDLVQNDP 907
Score = 72 (30.4 bits), Expect = 8.3e-31, Sum P(2) = 8.3e-31
Identities = 19/95 (20%), Positives = 41/95 (43%)
Query: 1 MLEKQMGSNFFRKILQNIISRAQGASPVRTLSTK------EFRHFANKVGNLERPFLKEF 54
++E ++ F ++ ++S A AS + S F + N+ +
Sbjct: 448 LIENRISMEFMLQVFNKLLSLASTASSQKYQSHMWSQMLVSTSGFLKSISNVSGKDIGPL 507
Query: 55 FPRWVGTCGCPVLRMGFSYNKRKNIVELAVLRDCT 89
+WV G F++N+++N++EL + +D T
Sbjct: 508 IKQWVDQSGVVKFFGSFAFNRKRNVLELEIRQDYT 542
Score = 42 (19.8 bits), Expect = 1.2e-27, Sum P(2) = 1.2e-27
Identities = 8/21 (38%), Positives = 15/21 (71%)
Query: 31 LSTKEFRHFANKVGNLERPFL 51
L++K+ R + +V +LE PF+
Sbjct: 54 LNSKQCRIYRVRVNDLEAPFI 74
>MGI|MGI:2443028 [details] [associations]
symbol:Taf2 "TAF2 RNA polymerase II, TATA box binding
protein (TBP)-associated factor" species:10090 "Mus musculus"
[GO:0000086 "G2/M transition of mitotic cell cycle" evidence=ISO]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005669 "transcription
factor TFIID complex" evidence=ISO;ISA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=ISO] [GO:0008237 "metallopeptidase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0033276
"transcription factor TFTC complex" evidence=ISO] [GO:0044212
"transcription regulatory region DNA binding" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] InterPro:IPR014782
InterPro:IPR016024 Pfam:PF01433 MGI:MGI:2443028 SUPFAM:SSF48371
GO:GO:0006355 GO:GO:0008270 GO:GO:0008237 GO:GO:0006351
eggNOG:COG0308 GO:GO:0005669 MEROPS:M01.972 HOVERGEN:HBG094022
OrthoDB:EOG46HG8V ChiTaRS:TAF2 EMBL:AC137950 EMBL:AK028828
EMBL:AK051126 IPI:IPI00658461 UniGene:Mm.380957
ProteinModelPortal:Q8C176 STRING:Q8C176 PhosphoSite:Q8C176
PRIDE:Q8C176 InParanoid:Q8C176 Genevestigator:Q8C176
GermOnline:ENSMUSG00000037343 Uniprot:Q8C176
Length = 1104
Score = 349 (127.9 bits), Expect = 8.4e-31, Sum P(2) = 8.4e-31
Identities = 105/354 (29%), Positives = 170/354 (48%)
Query: 116 GMMSIRVHELDGMYDHPILPMAGDAWQLLEIQCHSXXXXXXXXXXXXGSKPDGCDDNGDA 175
G + + V ELDG ++H L + ++ + +I CHS K NG+
Sbjct: 552 GPLKVTVQELDGSFNHT-LQIEENSLKH-DIPCHSKSRR--------NKKKKIPLMNGEE 601
Query: 176 VAGLDMRSSME--SPLSWIRADPEMEYLAEIHFNQPVQMWINQLEKDGDVVXXXXXXXXX 233
V +D+ S+ME SPL WIR DP+M L ++ F Q MW +L + DVV
Sbjct: 602 V-DMDL-SAMEADSPLLWIRIDPDMSVLRKVEFEQADFMWQYELRYERDVVAQQESILAL 659
Query: 234 XXXPHLSFNVVNTLNNFLSDSKAFWRVRIEAAYALANTA-SEETDWAGLLHLVKFYKSRR 292
P + + L + L + F+RVR+ A + LA A S + W G + + +R
Sbjct: 660 EKFPTPASRLA--LTDILEQEQCFYRVRMSACFCLAKIANSMVSTWTGPPAMKSLF-TRM 716
Query: 293 FDENI--GLPRPNDFRDFSEYFVLEAIPHAVAMVRAADNKSPREAVEFVLQLLKYNDNNG 350
F + + N+F F YF+ + +P A+A++R N P+E + F+L L+KYNDN
Sbjct: 717 FCCKTCPNIVKTNNFMSFQSYFLQKTMPVAMALLRDVHNLCPKEVLTFILDLIKYNDNRK 776
Query: 351 NPYSDVFWLA----ALVQSVGELEFGQQSILFLSSL-------LKRIDRLLQFDRLMPSY 399
N +SD ++ A AL SV + L +L L+ I R L ++L+PSY
Sbjct: 777 NKFSDNYYRAEMIDALANSVTPAVSVNNEVRTLDNLNPDVRLILEEITRFLNMEKLLPSY 836
Query: 400 NGILTISCIRTLTQIALKLSGFISLDQVVKLIKPFRDFNTIWQVRVEASRALLD 453
+T+SC+R + L+ +G + D L K + ++ +R+ A A++D
Sbjct: 837 RHTITVSCLRAIR--VLQKNGHVPSD--ASLFKSYAEYGHFVDIRIAALEAVVD 886
Score = 73 (30.8 bits), Expect = 8.4e-31, Sum P(2) = 8.4e-31
Identities = 22/116 (18%), Positives = 50/116 (43%)
Query: 1 MLEKQMGSNFFRKILQNIISRAQGASPVRTLSTKEFRH------FANKVGNLERPFLKEF 54
++E ++ F ++ ++S A AS + S + F + N+ ++
Sbjct: 449 LIENRISMEFMLQVFNKLLSLASTASSQKFQSHMWSQMLVSTYGFLKSISNVSGKDIQPL 508
Query: 55 FPRWVGTCGCPVLRMGFSYNKRKNIVELAVLRDCTVKPDSRTPVLSSNTDSENRDG 110
+W+ G F++N+++N++EL + +D T P ++ V + DG
Sbjct: 509 IKQWLDQSGVVKFYGSFAFNRKRNVLELEIKQDYT-SPGTQKYVGPLKVTVQELDG 563
>UNIPROTKB|F1LNY6 [details] [associations]
symbol:Taf2 "Protein Taf2" species:10116 "Rattus
norvegicus" [GO:0000086 "G2/M transition of mitotic cell cycle"
evidence=IEA] [GO:0005669 "transcription factor TFIID complex"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IEA] [GO:0008237 "metallopeptidase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
InterPro:IPR014782 InterPro:IPR016024 Pfam:PF01433 RGD:621487
GO:GO:0000086 SUPFAM:SSF48371 GO:GO:0008270 GO:GO:0045944
GO:GO:0008237 GO:GO:0044212 GO:GO:0006367 GO:GO:0005669
GO:GO:0033276 CTD:6873 GeneTree:ENSGT00390000000420 KO:K03128
IPI:IPI00366255 RefSeq:NP_579853.1 UniGene:Rn.33143
Ensembl:ENSRNOT00000040836 GeneID:170844 KEGG:rno:170844
NextBio:621269 ArrayExpress:F1LNY6 Uniprot:F1LNY6
Length = 1200
Score = 346 (126.9 bits), Expect = 1.2e-30, Sum P(2) = 1.2e-30
Identities = 102/353 (28%), Positives = 168/353 (47%)
Query: 116 GMMSIRVHELDGMYDHPILPMAGDAWQLLEIQCHSXXXXXXXXXXXXGSKPDGCDDNGDA 175
G + + V ELDG ++H L + ++ + +I CHS K NG+
Sbjct: 562 GPLKVTVQELDGSFNHT-LQIEENSLKH-DIPCHSKSRR--------NKKKKIPLMNGEE 611
Query: 176 VAGLDMRS-SMESPLSWIRADPEMEYLAEIHFNQPVQMWINQLEKDGDVVXXXXXXXXXX 234
V +D+ + +SPL WIR DP+M L ++ F Q MW +L + DVV
Sbjct: 612 V-DMDLSAMDADSPLLWIRIDPDMSVLRKVEFEQADFMWQYELRYERDVVAQQESILALE 670
Query: 235 XXPHLSFNVVNTLNNFLSDSKAFWRVRIEAAYALANTA-SEETDWAGLLHLVKFYKSRRF 293
P + + L + L + F+RVR+ A + LA A S + W G + + +R F
Sbjct: 671 KFPTPASRLA--LTDILEQEQCFYRVRMSACFCLAKIANSMVSTWTGPPAMKSLF-TRMF 727
Query: 294 DENI--GLPRPNDFRDFSEYFVLEAIPHAVAMVRAADNKSPREAVEFVLQLLKYNDNNGN 351
+ + N+F F YF+ + +P A+A++R N P+E + F+L L+KYNDN N
Sbjct: 728 CCKTCPNIVKTNNFMSFQSYFLQKTMPVAMALLRDVHNLCPKEVLTFILDLIKYNDNRKN 787
Query: 352 PYSDVFWLA----ALVQSVGELEFGQQSILFLSSL-------LKRIDRLLQFDRLMPSYN 400
+SD ++ A AL SV + L +L L+ I R L ++L+PSY
Sbjct: 788 KFSDNYYRAEMIDALANSVTPAVSVNNEVRTLDNLNPDVRLILEEITRFLNMEKLLPSYR 847
Query: 401 GILTISCIRTLTQIALKLSGFISLDQVVKLIKPFRDFNTIWQVRVEASRALLD 453
+T+SC+R + L+ +G + D L K + ++ +R+ A A++D
Sbjct: 848 HTITVSCLRAIR--VLQKNGHVPSD--ASLFKSYAEYGHFVDIRIAALEAVVD 896
Score = 76 (31.8 bits), Expect = 1.2e-30, Sum P(2) = 1.2e-30
Identities = 23/116 (19%), Positives = 50/116 (43%)
Query: 1 MLEKQMGSNFFRKILQNIISRAQGASPVRTLSTKEFRH------FANKVGNLERPFLKEF 54
++E ++ F ++ ++S A AS + S + F + N+ ++
Sbjct: 459 LIENRISMEFMLQVFNKLLSLASTASSQKFQSHMWSQMLVSTYGFLKSISNVSGKDIQPL 518
Query: 55 FPRWVGTCGCPVLRMGFSYNKRKNIVELAVLRDCTVKPDSRTPVLSSNTDSENRDG 110
+WV G F++N+++N++EL + +D T P ++ V + DG
Sbjct: 519 IKQWVDQSGVVKFYGSFAFNRKRNVLELEIKQDYT-SPGTQKYVGPLKVTVQELDG 573
>UNIPROTKB|Q5ZIT8 [details] [associations]
symbol:TAF2 "Transcription initiation factor TFIID subunit
2" species:9031 "Gallus gallus" [GO:0008237 "metallopeptidase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR014782 InterPro:IPR016024 Pfam:PF01433 GO:GO:0005634
SUPFAM:SSF48371 GO:GO:0006355 GO:GO:0008270 GO:GO:0008237
GO:GO:0006351 EMBL:AJ720696 IPI:IPI00583186 UniGene:Gga.21373
ProteinModelPortal:Q5ZIT8 MEROPS:M01.972 PRIDE:Q5ZIT8
HOVERGEN:HBG094022 Uniprot:Q5ZIT8
Length = 1168
Score = 343 (125.8 bits), Expect = 1.9e-30, Sum P(2) = 1.9e-30
Identities = 103/353 (29%), Positives = 169/353 (47%)
Query: 116 GMMSIRVHELDGMYDHPILPMAGDAWQLLEIQCHSXXXXXXXXXXXXGSKPDGCDDNGDA 175
G + + V ELDG ++H L + ++ + +I CHS K NG+
Sbjct: 552 GPLKVTVQELDGSFNHT-LQIEENSLKH-DIPCHSKSRR--------NKKKKIPLMNGEE 601
Query: 176 VAGLDMRS-SMESPLSWIRADPEMEYLAEIHFNQPVQMWINQLEKDGDVVXXXXXXXXXX 234
V +D+ + +SPL WIR DP+M L ++ F Q MW QL + DVV
Sbjct: 602 V-DMDLSAMDADSPLLWIRIDPDMSVLRKVEFEQSDFMWQYQLRYERDVVAQEEAILALE 660
Query: 235 XXPHLSFNVVNTLNNFLSDSKAFWRVRIEAAYALANTA-SEETDWAGLLHLVKFYKSRRF 293
P + + L + L + F+RVR+ A + LA A S + W G + + +R F
Sbjct: 661 KFPTPASRLA--LTDILEQEQCFYRVRMLACFCLAKIANSMVSTWTGPPAMKSLF-TRMF 717
Query: 294 DENI--GLPRPNDFRDFSEYFVLEAIPHAVAMVRAADNKSPREAVEFVLQLLKYNDNNGN 351
+ + N+F +F YF+ + +P A+A++R N P+E + F+L L+KYNDN N
Sbjct: 718 CCKTCPNIVKTNNFMNFQSYFLQKTMPVAMALLRDVHNLCPKEVLMFILDLIKYNDNRKN 777
Query: 352 PYSDVFWLA----ALVQSVGELEFGQQSILFLSSL-------LKRIDRLLQFDRLMPSYN 400
+SD ++ A AL SV + L +L L+ I R L ++L+PSY
Sbjct: 778 KFSDNYYRAELIDALANSVTPAVSVNNEVRTLDNLNPDVRLILEEITRFLNMEKLLPSYR 837
Query: 401 GILTISCIRTLTQIALKLSGFISLDQVVKLIKPFRDFNTIWQVRVEASRALLD 453
+T+SC++ + L+ +G + D L K + ++ VR+ A A++D
Sbjct: 838 HTITVSCLKAIR--VLQKNGHVPSDPA--LFKSYAEYGHFVDVRIAALEAVVD 886
Score = 77 (32.2 bits), Expect = 1.9e-30, Sum P(2) = 1.9e-30
Identities = 23/116 (19%), Positives = 49/116 (42%)
Query: 1 MLEKQMGSNFFRKILQNIISRAQGASPVRTLSTK------EFRHFANKVGNLERPFLKEF 54
++E ++ F ++ ++S A AS + S F + N+ ++
Sbjct: 449 LIENRISMEFMLQVFNKLLSLASTASSQKFQSHMWSQMLVSTSGFLKSISNVSGKDIQPL 508
Query: 55 FPRWVGTCGCPVLRMGFSYNKRKNIVELAVLRDCTVKPDSRTPVLSSNTDSENRDG 110
+WV G F++N+++N++EL + +D T P ++ V + DG
Sbjct: 509 IKQWVDQSGVVKFYGSFAFNRKRNVLELEIKQDYT-SPGTQKYVGPLKVTVQELDG 563
>UNIPROTKB|F1S282 [details] [associations]
symbol:TAF2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA] [GO:0033276
"transcription factor TFTC complex" evidence=IEA] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=IEA] [GO:0005669 "transcription factor TFIID complex"
evidence=IEA] [GO:0000086 "G2/M transition of mitotic cell cycle"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA]
InterPro:IPR014782 InterPro:IPR016024 Pfam:PF01433 GO:GO:0000086
SUPFAM:SSF48371 GO:GO:0008270 GO:GO:0045944 GO:GO:0008237
GO:GO:0044212 GO:GO:0006367 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00390000000420 OMA:PCVDSFA EMBL:CU467749
EMBL:CU326377 Ensembl:ENSSSCT00000006583 ArrayExpress:F1S282
Uniprot:F1S282
Length = 1101
Score = 348 (127.6 bits), Expect = 7.5e-30, Sum P(2) = 7.5e-30
Identities = 103/353 (29%), Positives = 168/353 (47%)
Query: 116 GMMSIRVHELDGMYDHPILPMAGDAWQLLEIQCHSXXXXXXXXXXXXGSKPDGCDDNGDA 175
G + + V ELDG ++H L + ++ + +I CHS K NG+
Sbjct: 464 GPLKVTVQELDGSFNHT-LQIEENSLKH-DIPCHSKSRR--------NKKKKIPLMNGEE 513
Query: 176 VAGLDMRS-SMESPLSWIRADPEMEYLAEIHFNQPVQMWINQLEKDGDVVXXXXXXXXXX 234
V +D+ + +SPL WIR DP+M L ++ F Q MW QL + DVV
Sbjct: 514 V-DMDLSAMDADSPLLWIRIDPDMSVLRKVEFEQADFMWQYQLRYERDVVAQQESILALE 572
Query: 235 XXPHLSFNVVNTLNNFLSDSKAFWRVRIEAAYALANTA-SEETDWAGLLHLVKFYKSRRF 293
P + + L + L + F+RVR+ A + LA A S + W G + + +R F
Sbjct: 573 KFPTPASRLA--LTDILEQEQCFYRVRMSACFCLAKIANSMVSTWTGPPAMKSLF-TRMF 629
Query: 294 DENI--GLPRPNDFRDFSEYFVLEAIPHAVAMVRAADNKSPREAVEFVLQLLKYNDNNGN 351
+ + N+F F YF+ + +P A+A++R N P+E + F+L L+KYNDN N
Sbjct: 630 CCKTCPNIVKTNNFMSFQSYFLQKTMPVAMALLRDVHNLCPKEVLTFILDLIKYNDNRKN 689
Query: 352 PYSDVFWLA----ALVQSVGELEFGQQSILFLSSL-------LKRIDRLLQFDRLMPSYN 400
+SD ++ A AL SV + L +L L+ I R L ++L+PSY
Sbjct: 690 KFSDNYYRAEMIDALANSVTPAVSVNNEVRTLDNLNPDVRLILEEITRFLNMEKLLPSYR 749
Query: 401 GILTISCIRTLTQIALKLSGFISLDQVVKLIKPFRDFNTIWQVRVEASRALLD 453
+T+SC+R + L+ +G + D L K + ++ +R+ A A++D
Sbjct: 750 HTITVSCLRAIR--VLQKNGHVPSDP--SLFKSYAEYGHFVDIRIAALEAVVD 798
Score = 65 (27.9 bits), Expect = 7.5e-30, Sum P(2) = 7.5e-30
Identities = 22/117 (18%), Positives = 49/117 (41%)
Query: 1 MLEKQMGSNFFRKILQNIISRAQGASPVRTLSTK------EFRHFANKVGNLERPFLKEF 54
++E ++ F ++ ++S A AS + S F + N+ ++
Sbjct: 360 LIENRISMEFMLQVFNKLLSLASTASSQKFQSHMWSQMLVSTSGFLKSISNVSGKDIQPL 419
Query: 55 FPRWV-GTCGCPVLRMGFSYNKRKNIVELAVLRDCTVKPDSRTPVLSSNTDSENRDG 110
+W+ G F++N+++N++EL + +D T P ++ V + DG
Sbjct: 420 IKQWMCDQSGVVKFYGSFAFNRKRNVLELEIKQDYT-SPGTQKYVGPLKVTVQELDG 475
>UNIPROTKB|F1MME0 [details] [associations]
symbol:TAF2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA] [GO:0033276
"transcription factor TFTC complex" evidence=IEA] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=IEA] [GO:0005669 "transcription factor TFIID complex"
evidence=IEA] [GO:0000086 "G2/M transition of mitotic cell cycle"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA]
InterPro:IPR014782 InterPro:IPR016024 Pfam:PF01433 GO:GO:0000086
SUPFAM:SSF48371 GO:GO:0008270 GO:GO:0045944 GO:GO:0008237
GO:GO:0044212 GO:GO:0006367 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00390000000420 OMA:PCVDSFA EMBL:DAAA02039690
EMBL:DAAA02039691 IPI:IPI00923924 Ensembl:ENSBTAT00000061330
Uniprot:F1MME0
Length = 1202
Score = 337 (123.7 bits), Expect = 1.5e-29, Sum P(2) = 1.5e-29
Identities = 102/353 (28%), Positives = 167/353 (47%)
Query: 116 GMMSIRVHELDGMYDHPILPMAGDAWQLLEIQCHSXXXXXXXXXXXXGSKPDGCDDNGDA 175
G + + V ELDG ++H L + ++ + +I CHS K NG+
Sbjct: 564 GPLKVTVQELDGSFNHT-LQIEENSLKH-DIPCHSKSRR--------NKKKKIPLMNGEE 613
Query: 176 VAGLDMRS-SMESPLSWIRADPEMEYLAEIHFNQPVQMWINQLEKDGDVVXXXXXXXXXX 234
V +D+ + +SPL WIR DP+M L ++ Q MW QL + DVV
Sbjct: 614 V-DMDLSAMDADSPLLWIRIDPDMAVLRKVDSEQADFMWQYQLRYERDVVAQQEAISALE 672
Query: 235 XXPHLSFNVVNTLNNFLSDSKAFWRVRIEAAYALANTA-SEETDWAGLLHLVKFYKSRRF 293
P + + L + L + F+RVR+ A + LA A S + W G + + +R F
Sbjct: 673 RFPTPASRLA--LTDVLEQEQCFYRVRMAACFCLAKIANSMVSTWTGPPAMKSLF-TRMF 729
Query: 294 DENI--GLPRPNDFRDFSEYFVLEAIPHAVAMVRAADNKSPREAVEFVLQLLKYNDNNGN 351
+ + N+F F YF+ + +P A+A++R N P+E + F+L L+KYNDN N
Sbjct: 730 CCKTCPNIVKTNNFMSFQSYFLQKTMPVAMALLRDVHNLCPKEVLTFILDLIKYNDNRKN 789
Query: 352 PYSDVFWLA----ALVQSVGELEFGQQSILFLSSL-------LKRIDRLLQFDRLMPSYN 400
+SD ++ A AL SV + L +L L+ I R L ++L+PSY
Sbjct: 790 KFSDNYYRAEMIDALANSVTPAVSVNNEVRTLDNLNPDVRLILEEITRFLNMEKLLPSYR 849
Query: 401 GILTISCIRTLTQIALKLSGFISLDQVVKLIKPFRDFNTIWQVRVEASRALLD 453
+T+SC+R + L+ +G + D L K + ++ +R+ A A++D
Sbjct: 850 HTITVSCLRAIR--VLQKNGHVPSDP--SLFKSYAEYGHFVDIRIAALEAVVD 898
Score = 75 (31.5 bits), Expect = 1.5e-29, Sum P(2) = 1.5e-29
Identities = 27/120 (22%), Positives = 55/120 (45%)
Query: 1 MLEKQMGSNFFRKILQNIISRAQGASPVR---------TLSTKEF-RHFANKVGNLERPF 50
++E ++ F ++ ++S A AS + +ST F + +N G +P
Sbjct: 459 LIENRISMEFMLQVFNKLLSLASTASSQKFQSHMWSQMLVSTSGFLKSISNVSGKDIQPL 518
Query: 51 LKEFFPRWVGTCGCPVLRMGFSYNKRKNIVELAVLRDCTVKPDSRTPVLSSNTDSENRDG 110
+K++F R G F++N+++N++EL + +D T P ++ V + DG
Sbjct: 519 IKQWFCR--DQSGVVKFYGSFAFNRKRNVLELEIKQDYT-SPGTQKYVGPLKVTVQELDG 575
>FB|FBgn0011836 [details] [associations]
symbol:Taf2 "TBP-associated factor 2" species:7227
"Drosophila melanogaster" [GO:0008134 "transcription factor
binding" evidence=IPI] [GO:0001129 "TBP-class protein binding RNA
polymerase II transcription factor activity involved in
preinitiation complex assembly" evidence=IPI] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] [GO:0005669
"transcription factor TFIID complex" evidence=ISS;IPI] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0005634 "nucleus" evidence=NAS;IDA] [GO:0001075 "RNA polymerase
II core promoter sequence-specific DNA binding transcription factor
activity involved in preinitiation complex assembly" evidence=IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=ISS] [GO:0008237 "metallopeptidase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046427 "positive regulation of JAK-STAT cascade"
evidence=IMP] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR014782 Pfam:PF01433 EMBL:AE014296 GO:GO:0022008
GO:GO:0043565 GO:GO:0008270 eggNOG:COG0308 GO:GO:0004222
GO:GO:0046427 GO:GO:0005669 GO:GO:0060261 GO:GO:0001129 CTD:6873
GeneTree:ENSGT00390000000420 KO:K03128 OMA:PCVDSFA EMBL:X79243
EMBL:AY070564 PIR:A54063 RefSeq:NP_729571.1 UniGene:Dm.6380
ProteinModelPortal:Q24325 DIP:DIP-255N IntAct:Q24325 STRING:Q24325
PaxDb:Q24325 EnsemblMetazoa:FBtr0076361 EnsemblMetazoa:FBtr0332688
GeneID:39164 KEGG:dme:Dmel_CG6711 FlyBase:FBgn0011836
InParanoid:Q24325 OrthoDB:EOG4PC86W PhylomeDB:Q24325
GenomeRNAi:39164 NextBio:812285 Bgee:Q24325 GermOnline:CG6711
Uniprot:Q24325
Length = 1221
Score = 339 (124.4 bits), Expect = 1.2e-27, Sum P(2) = 1.2e-27
Identities = 104/395 (26%), Positives = 183/395 (46%)
Query: 99 LSSNTDSENRDGDIGWPGMMSIRVHELDGMYDHPILPMAGDAWQLLEIQCHSXXXXXXXX 158
L D N+ G + G + +++ ELDG + H + +I CHS
Sbjct: 549 LEIRQDYVNQRGIRKYNGPLMVQLQELDGTFKHTL--QIESTLVKSDITCHSKSRRNKK- 605
Query: 159 XXXXGSKPDGCDDNGDAVAGLDMRSSMESPLSWIRADPEMEYLAEIHFNQPVQMWINQLE 218
K C G+ V +D+ + +SP+ WIR DPEM L ++ QP W QL
Sbjct: 606 -----KKIPLC--TGEEV-DMDLSAMDDSPVLWIRLDPEMILLRDLIIEQPDFQWQYQLR 657
Query: 219 KDGDVVXXXXXXXXXXXXPHLSFNVVNTLNNFLSDSKAFWRVRIEAAYALANTASEET-D 277
+ DV P + + L + + + F++VR EAA++L A++
Sbjct: 658 HERDVTAQFQAIQALQKYPTNATRLA--LTDTIESERCFYQVRCEAAHSLTKVANQMVAS 715
Query: 278 WAGLLHLVKFYKSRRFDENIGLP---RPNDFRDFSEYFVLEAIPHAVAMVRAADNKSPRE 334
W+G ++ + R+F + P + N+F +F YF+ +AIP A+A +R + P E
Sbjct: 716 WSGPPAMLNIF--RKFFGSFSAPHIIKLNNFSNFQLYFLQKAIPVAMAGLRTSHGICPPE 773
Query: 335 AVEFVLQLLKYNDNNGNPYSDVFWLAALVQSVGELEFGQQSILF---------LSS---- 381
+ F+ L KYN+N+ N Y+D ++ AALV+++GE S+ LS+
Sbjct: 774 VMRFLFDLFKYNENSRNHYTDAYYRAALVEALGETLTPVVSVAIHGTQITTDSLSTDAKL 833
Query: 382 LLKRIDRLLQFDRLMPSYNGILTISCIRTLTQIALKLSGFISLDQVVKLIKPFRDFNTIW 441
+L + RLL ++ +PSY ++++SC++ + KL F L + + + + ++
Sbjct: 834 VLDEVTRLLNMEKHLPSYKYMVSVSCLKVIR----KLQKFGHLPSLPHIYRSYAEYGIYL 889
Query: 442 QVRVEASRALLDLEFHCNGIDSALSLFIKSVEEEP 476
+R+ A L+D +G L I +E +P
Sbjct: 890 DLRIAAMECLVDF-VKVDGRSEDLEHLITLLETDP 923
Score = 55 (24.4 bits), Expect = 1.2e-27, Sum P(2) = 1.2e-27
Identities = 10/34 (29%), Positives = 19/34 (55%)
Query: 54 FFPRWVGTCGCPVLRMGFSYNKRKNIVELAVLRD 87
F +WV T G + +N+++N +EL + +D
Sbjct: 521 FMDQWVRTGGHAKFSLTSVFNRKRNTIELEIRQD 554
>ASPGD|ASPL0000043622 [details] [associations]
symbol:AN1494 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0032153 "cell
division site" evidence=IEA] [GO:0003674 "molecular_function"
evidence=ND] EMBL:BN001307 GO:GO:0003743 EMBL:AACD01000023
KO:K03128 HOGENOM:HOG000157894 OrthoDB:EOG43JGCZ eggNOG:NOG249703
OMA:CTALTRT RefSeq:XP_659098.1 STRING:Q5BD86
EnsemblFungi:CADANIAT00008118 GeneID:2874826 KEGG:ani:AN1494.2
Uniprot:Q5BD86
Length = 1282
Score = 262 (97.3 bits), Expect = 9.0e-26, Sum P(2) = 9.0e-26
Identities = 61/193 (31%), Positives = 98/193 (50%)
Query: 182 RSSMESPLSWIRADPEMEYLAEIHFNQPVQMWINQLEKDGDVVXXXXXXXXXXXXPHLSF 241
R ES WIR D + E++ ++ P M+++QL++D DVV
Sbjct: 727 RMGQES-YEWIRMDADFEWICKLSLVMPGYMYLSQLQQDRDVVAQLESLQYMAA--QREH 783
Query: 242 NVVNTLN-NFLSDSKAFWRVRIEAAYALANTASEETDWAGLLHLVKFYKSRRFDENIGLP 300
+++T+ L D + F+ +R+ AA AL A EE +W GL HL K ++ +
Sbjct: 784 PLISTIFLRTLMDRRYFYGIRVAAARALVKHAKEEINWLGLFHLEKAFQELFCLPGSPMT 843
Query: 301 RPNDFRDFSEYFVLEAIPHAVAMVRAADNKSPREAVEFVLQLLKYNDNNGNPYSDVFWLA 360
R N+F D + Y + IP A++ VR K+P F+ LK+NDN+ N YSD F++A
Sbjct: 844 RSNNFSDRAAYVLQLVIPEAISKVRDVSGKTPMRVKRFLYDKLKFNDNSNNEYSDNFYVA 903
Query: 361 ALVQSVGELEFGQ 373
L++S+ G+
Sbjct: 904 TLMKSLCHAMLGR 916
Score = 119 (46.9 bits), Expect = 9.0e-26, Sum P(2) = 9.0e-26
Identities = 37/140 (26%), Positives = 67/140 (47%)
Query: 2 LEKQMGSNFFRKILQNIISRAQ-GASPVRTLSTKEFRHFANKVGNLERPFLKEFFPRWVG 60
L K G +I+ + A+ G P +++ F+ ++G+ + L FF +W+
Sbjct: 513 LTKASGKATMSRIISRLFLNARMGELPNGAVTSSVFQKTCERLGHAK---LDTFFNQWIY 569
Query: 61 TCGCPVLRMGFSYNKRKNIVELAVLRDCTVKPDSRT---PVLSSNTDSENRD---GDIG- 113
GCP + +NK+K +VE+ + + + +P +R + E R+ G I
Sbjct: 570 GAGCPRFQATQRFNKKKLVVEMMIKQVQSDQPTARDLERDAFMRDVKEEIRNVYAGTIQP 629
Query: 114 -WPGMMSIRVHELDGM-YDH 131
+ G M+IR+HE DG Y+H
Sbjct: 630 VFTGSMTIRIHEADGTPYEH 649
>WB|WBGene00006383 [details] [associations]
symbol:taf-2 species:6239 "Caenorhabditis elegans"
[GO:0008237 "metallopeptidase activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IMP] InterPro:IPR014782 Pfam:PF01433
GO:GO:0009792 GO:GO:0008270 GO:GO:0045944 GO:GO:0008237
eggNOG:COG0308 GeneTree:ENSGT00390000000420 KO:K03128 OMA:PCVDSFA
EMBL:FO080119 PIR:T33893 RefSeq:NP_500378.1
ProteinModelPortal:Q9TYN3 IntAct:Q9TYN3 STRING:Q9TYN3 PaxDb:Q9TYN3
EnsemblMetazoa:Y37E11B.4 GeneID:192051 KEGG:cel:CELE_Y37E11B.4
UCSC:Y37E11B.4 CTD:192051 WormBase:Y37E11B.4 HOGENOM:HOG000018552
InParanoid:Q9TYN3 NextBio:951382 Uniprot:Q9TYN3
Length = 1086
Score = 293 (108.2 bits), Expect = 3.7e-22, P = 3.7e-22
Identities = 119/508 (23%), Positives = 221/508 (43%)
Query: 1 MLEKQMGSNFFRKILQNIISRAQGASPVRTLSTKEFRHFANKVGNLERPFLKEFFPRWVG 60
ML++++G F ++L +++ S +T + +RH + FF +
Sbjct: 494 MLQRRIGLEPFMRVLHRVLTVGLDMSEKKT-TPAAWRHLLTTT--------ESFFRSVIS 544
Query: 61 TCGCPVLRMGFSYNKRKNIVELAVLRDCTVKPDSRTPVLSSNTDSENRDGDIGWPGMMSI 120
G + + + AV D K + + D+E +G + G +S+
Sbjct: 545 VTGKEIPSFLSQFVRTGGHAAFAVKFDFNRKRNI-VEIEIKQDDTEG-NGRTQYTGPLSV 602
Query: 121 RVHELDGMYDHPILPMAGDAWQLLEIQCHSXXXXXXXXXXXXGSKPDGCDDNGDAVAGLD 180
V E+DG + H I A EI CHS + G+ + +D
Sbjct: 603 VVQEVDGAFTHTI--QIDGAVSHAEISCHSKGRKQRKKKVPLLT--------GEEIE-ID 651
Query: 181 MRS-SMESPLSWIRADPEMEYLAEIHFNQPVQMWINQLEKDGDVVXXXXXXXXXXXXPHL 239
+ + ESP+ W+R DP+ + EI +QP+ W L + DV+ P
Sbjct: 652 LTNMDAESPILWLRIDPDYLLIREITISQPMFHWEYMLRYERDVIAQMEALERIQALP-- 709
Query: 240 SFNVVNTLNNFLSDSKAFWRVRIEAAYALANTASEETD--WAGLLHLVKFYKSRRFDENI 297
S + + + + +++ K F+R+R AA+ L + +++ G L+ ++ F
Sbjct: 710 SAHSRSVIVDAVANEKFFYRIRYRAAFVLTFVQNRKSEALTVGTPVLINMFRES-FGSKA 768
Query: 298 G--LPRPNDF----RDFSEYFVLEAIPHAVAMVRAADNKSPREAVEFVLQLLKYNDNNGN 351
+PR N+F ++ +YFV++A+P A+A +R + + F+L L+K+NDN+ N
Sbjct: 769 ATNIPRSNNFVVTAQNLQQYFVMQALPQAIARLRRQSGECHEDVQPFLLDLIKFNDNSTN 828
Query: 352 PYSDVFWLAALVQSVGELEFGQQSILF-------LSS----LLKRIDRLLQFDRLMPSYN 400
YSD F+ AAL S+ F ++ LS+ L+K L D + PS+
Sbjct: 829 RYSDDFYRAALYNSLASSVFPHDALPCHVELPENLSNDVRVLIKEFTYALNMDTVSPSWG 888
Query: 401 GILTISCIRTLTQIALKLSGFISLDQVVKLIKPFRDFNTIWQVRVEASRALLDL---EFH 457
++ + + L Q L+ G++ LD +L+ F N Q+R A ++D + H
Sbjct: 889 RVVGAAALTGLYQ--LQKCGYLPLDS--QLLWTFSHPNCCVQMRRCAITLIIDRIVNDPH 944
Query: 458 CNG---IDSALSLFIKSVEEEPSLRGQV 482
+D + L + +E++PS+R +
Sbjct: 945 AADTRMLDLSRILELAELEQDPSIRRMI 972
>SGD|S000000638 [details] [associations]
symbol:TAF2 "TFIID subunit (150 kDa)" species:4932
"Saccharomyces cerevisiae" [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006366 "transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0051123 "RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IC]
[GO:0005669 "transcription factor TFIID complex" evidence=IDA]
[GO:0003682 "chromatin binding" evidence=IDA] [GO:0001075 "RNA
polymerase II core promoter sequence-specific DNA binding
transcription factor activity involved in preinitiation complex
assembly" evidence=IC] SGD:S000000638 GO:GO:0006355 EMBL:X59720
EMBL:BK006937 GO:GO:0003682 EMBL:X63853 GO:GO:0005669 GO:GO:0051123
GeneTree:ENSGT00390000000420 KO:K03128 HOGENOM:HOG000157894
OrthoDB:EOG43JGCZ EMBL:M60486 PIR:S19455 RefSeq:NP_009971.1
ProteinModelPortal:P23255 DIP:DIP-343N IntAct:P23255
MINT:MINT-617656 STRING:P23255 PaxDb:P23255 PeptideAtlas:P23255
EnsemblFungi:YCR042C GeneID:850409 KEGG:sce:YCR042C CYGD:YCR042c
eggNOG:NOG249703 OMA:CTALTRT NextBio:965956 Genevestigator:P23255
GermOnline:YCR042C Uniprot:P23255
Length = 1407
Score = 219 (82.2 bits), Expect = 7.1e-21, Sum P(2) = 7.1e-21
Identities = 56/222 (25%), Positives = 112/222 (50%)
Query: 191 WIRADPEMEYLAEIHFNQPVQMWINQLEKDGDV------VXXXXXXXXXXXXPHLSFNVV 244
WIR D ++E++ ++H NQP M+ +QL +DGD+ + L ++ +
Sbjct: 842 WIRIDSDLEWICQMHINQPDYMFSSQLRQDGDIEAQLEAIRYYEDVVVNGGVKSLVYSSI 901
Query: 245 NTLNNFLSDSKAFWRVRIEAAYALANTASEETDWAGLLHLVKFYKSRRFDENIGLPRPND 304
L D + F+ +R+ A AL+ + G+ HL++ ++ E+ +P+ N+
Sbjct: 902 --LFRTAIDERYFFGIRLAACEALSKYVYDPDFTGGVKHLIQIFQILFCLEDSNIPKSNN 959
Query: 305 FRDFSEYFVLEAIPHAVAMVRAADNKSPREAVEFVLQLLKYNDNNGNPYSDVFWLAALVQ 364
F + YF+ IP +A V+ + K P+ +F+L +L YN+N N YSD ++ +L++
Sbjct: 960 FENPKLYFLQCNIPKYLAKVKNENGKCPKLVKQFLLDILVYNENGENKYSDDAYVRSLIE 1019
Query: 365 SVGELEFGQQSILFLSSLLKRIDRLLQFDRL---MPSYNGIL 403
+V ++ + +K +LL+++ L + SY ++
Sbjct: 1020 NVVKVALNEYKDKAYMEKVKT--QLLRYENLVNWLSSYESLI 1059
Score = 118 (46.6 bits), Expect = 7.1e-21, Sum P(2) = 7.1e-21
Identities = 41/145 (28%), Positives = 74/145 (51%)
Query: 13 KILQNIISRAQ-GASPVRTLSTKEFRHFANKVGNLERPFLKEFFPRWVGTCGCPVLRMGF 71
++L I +A G P +L++ F+H +V + L+ FF WV G P+LR+
Sbjct: 630 RVLPKIFLQAMSGDLPNNSLTSSHFQHVCERVNKSK---LENFFNEWVYGSGVPILRVTQ 686
Query: 72 SYNKRKNIVELAV--LRDCTV---KPDSRTPVLSSNTDS-ENRDGDIG--WPGMMSIRVH 123
+N+++ ++EL + ++D + K S D E+ D + + G M+IR+H
Sbjct: 687 RFNRKRMVIELGIRQVQDEELGHEKVVGEEGFFKSALDHLEHPDLNRTECFTGSMTIRIH 746
Query: 124 ELDGM-YDHPILPMAGDAWQLLEIQ 147
E DG Y+H I+ + D + ++IQ
Sbjct: 747 EHDGTPYEH-IVEIK-DTFTKIDIQ 769
>UNIPROTKB|G4N720 [details] [associations]
symbol:MGG_03637 "TATA-binding protein associated factor
Taf2" species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR014782 Pfam:PF01433
GO:GO:0008270 GO:GO:0008237 EMBL:CM001234 KO:K03128
RefSeq:XP_003716252.1 EnsemblFungi:MGG_03637T0 GeneID:2676513
KEGG:mgr:MGG_03637 Uniprot:G4N720
Length = 1579
Score = 223 (83.6 bits), Expect = 9.0e-21, Sum P(2) = 9.0e-21
Identities = 85/334 (25%), Positives = 151/334 (45%)
Query: 181 MRSSMESPLSWIRADPEMEYLAEIHFNQPVQMWINQLEKDGDVVXXXXXXXXXXXXPHLS 240
+++ + W+R D + E++ + N M+++QL++D DVV
Sbjct: 739 VKAMEQDSFEWLRIDADFEWICSMKTNMQPWMYVSQLQQDRDVVAQQESVLWLSQKAGGE 798
Query: 241 FNVVNTLNNFLSDSKAFWRVRIEAAYALAN---TASEE--------------TDWAGLLH 283
+ L L D++ + +R +A AL T EE TD GL
Sbjct: 799 I-LATVLGRTLMDTRYYHGIRTQAIKALQKQVWTKEEESLDPDSGIVNKLKKTDAGGLRI 857
Query: 284 LVKFYKSRRFDENIGLPRPNDFRDFSEYFVLEAIPHAVAMVRAADNKSPREAVEFVLQLL 343
L+K +K+ + PRPNDF + +Y V AIP A+A VR + PREA +F+L+ L
Sbjct: 858 LMKAFKAFFCYPDSQTPRPNDFSNKMQYAVQRAIPEAIARVREK-GRCPREAQQFLLEQL 916
Query: 344 KYNDNNGNPYSDVFWLAALVQSVGELEFGQQSILFLS--------SLLKR--IDRLLQF- 392
++N+N GN YSD F++A L+ ++ S+ ++ + L ++ LQ
Sbjct: 917 QFNNNTGNEYSDHFYVAGLLDALATSLIPDNSVETVTLRNSDDPETALDEEFLEAALQMI 976
Query: 393 DRLMPSYNGILTISCIRTLTQIALKL----SGFISLDQVVKLIKPFRDFNTIWQVRVEAS 448
+R + + I T+T + K +G I + + ++ +D +T+ + ++A
Sbjct: 977 ERYLRMDEWTNSYQNIWTVTALGCKQKLMKAGVIPIS-AIDFVRYLQD-STLDLISIKAF 1034
Query: 449 RALLDLEFHCNGIDSALSLFIKSVEEEPSLRGQV 482
AL+DL F N L L + P +R ++
Sbjct: 1035 EALVDLGFLFNKKILRLLLAYMTTHYSPFMRDRL 1068
Score = 114 (45.2 bits), Expect = 9.0e-21, Sum P(2) = 9.0e-21
Identities = 40/144 (27%), Positives = 70/144 (48%)
Query: 2 LEKQMGSNFFRKILQNIISRAQG-ASPVRTLSTKEFRHFANKVGNLERPFLKEFFPRWVG 60
+ K+ N R+++ ++SR+ AS VR +S++ FR KV + P L+ F+ +WV
Sbjct: 519 MTKKASHNGVRRVVLRLVSRSNTEASDVRFISSESFRKQCEKV-HKGAP-LELFWQQWVQ 576
Query: 61 TCGCPVLRMGFSYNKRKNIVELAVLRDCTVKPDSRTPVLSSNT------D------SENR 108
+ GC M YNK+ + V+L V R K P + N D ++
Sbjct: 577 SAGCARFDMSQRYNKKHSRVDLTV-RQPEEKSQLPQPPFNKNNFWGVLQDGRHVPAAKKE 635
Query: 109 DGDIGWPGMMSIRVHELDGM-YDH 131
+ + + G ++I +HE +G Y+H
Sbjct: 636 NVSVWFTGPITIGIHEANGTPYEH 659
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.137 0.410 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 707 670 0.00099 120 3 11 22 0.36 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 19
No. of states in DFA: 627 (67 KB)
Total size of DFA: 358 KB (2179 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 50.93u 0.14s 51.07t Elapsed: 00:00:03
Total cpu time: 50.94u 0.14s 51.08t Elapsed: 00:00:03
Start: Tue May 21 03:00:26 2013 End: Tue May 21 03:00:29 2013